Query 001987
Match_columns 985
No_of_seqs 701 out of 3643
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 07:34:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 99.8 1.4E-20 4.7E-25 206.5 19.6 166 3-180 18-194 (284)
2 1dqv_A Synaptotagmin III; beta 99.8 2.7E-20 9.1E-25 205.4 19.3 167 3-181 19-197 (296)
3 2fk9_A Protein kinase C, ETA t 99.8 1.2E-20 4E-25 186.4 13.6 116 533-657 26-156 (157)
4 2dmh_A Myoferlin; beta-sandwic 99.8 7.3E-20 2.5E-24 178.5 16.6 124 534-659 5-134 (140)
5 3kwu_A MUNC13-1; calcium bindi 99.8 2.3E-19 7.8E-24 176.7 17.8 121 533-657 14-146 (148)
6 2ep6_A MCTP2 protein; beta san 99.8 1.7E-19 5.9E-24 174.2 14.9 120 533-656 10-130 (133)
7 1gmi_A Protein kinase C, epsil 99.8 1.1E-19 3.7E-24 176.4 12.4 117 534-659 4-134 (136)
8 1wfj_A Putative elicitor-respo 99.8 1.5E-19 5.1E-24 175.4 13.3 123 533-659 7-131 (136)
9 1rlw_A Phospholipase A2, CALB 99.8 4.4E-19 1.5E-23 169.6 13.0 114 535-654 2-121 (126)
10 3b7y_A E3 ubiquitin-protein li 99.8 1.1E-18 3.9E-23 172.8 15.2 122 533-656 17-151 (153)
11 3m7f_B E3 ubiquitin-protein li 99.8 1.8E-18 6.3E-23 175.5 16.2 125 533-659 5-142 (176)
12 3pyc_A E3 ubiquitin-protein li 99.8 3.5E-18 1.2E-22 164.8 15.1 119 535-656 4-131 (132)
13 2b3r_A Phosphatidylinositol-4- 99.8 2.6E-18 8.8E-23 166.2 12.7 105 534-640 18-130 (134)
14 3kwu_A MUNC13-1; calcium bindi 99.8 1.3E-17 4.5E-22 164.1 17.3 118 1-130 14-146 (148)
15 1gmi_A Protein kinase C, epsil 99.7 1E-17 3.4E-22 162.5 14.6 115 1-133 3-135 (136)
16 3b7y_A E3 ubiquitin-protein li 99.7 2.2E-17 7.5E-22 163.5 16.7 120 3-131 19-153 (153)
17 2nq3_A Itchy homolog E3 ubiqui 99.7 9.6E-18 3.3E-22 169.2 14.1 120 534-656 34-159 (173)
18 2d8k_A Synaptotagmin VII; exoc 99.7 4.9E-18 1.7E-22 165.7 11.4 107 535-642 25-137 (141)
19 3fdw_A Synaptotagmin-like prot 99.7 2.8E-18 9.6E-23 169.0 9.1 109 535-644 22-138 (148)
20 2ep6_A MCTP2 protein; beta san 99.7 1.2E-17 4.1E-22 161.3 13.3 116 2-131 11-132 (133)
21 2z0u_A WW domain-containing pr 99.7 2.7E-18 9.1E-23 170.1 8.8 104 535-639 42-154 (155)
22 1rsy_A Synaptotagmin I; calciu 99.7 9.3E-18 3.2E-22 166.0 12.4 105 535-640 41-150 (152)
23 3f04_A Synaptotagmin-1; C2A, c 99.7 7.8E-18 2.7E-22 164.7 11.4 105 535-640 33-142 (143)
24 2dmh_A Myoferlin; beta-sandwic 99.7 3.2E-17 1.1E-21 159.7 15.5 120 2-133 5-135 (140)
25 3m7f_B E3 ubiquitin-protein li 99.7 4.3E-17 1.5E-21 165.4 16.7 121 3-132 7-142 (176)
26 2fk9_A Protein kinase C, ETA t 99.7 1.5E-17 5.2E-22 164.1 12.7 112 2-130 27-156 (157)
27 2bwq_A Regulating synaptic mem 99.7 1.1E-17 3.7E-22 160.6 11.2 103 535-639 17-129 (129)
28 1rh8_A Piccolo protein; beta-s 99.7 3.3E-18 1.1E-22 167.1 6.7 105 535-640 17-138 (142)
29 1wfm_A Synaptotagmin XIII; C2 99.7 3E-17 1E-21 159.5 12.8 103 535-641 25-133 (138)
30 1wfj_A Putative elicitor-respo 99.7 3E-17 1E-21 159.0 12.7 118 2-133 8-132 (136)
31 3rdl_A Protein kinase C alpha 99.7 2E-17 6.9E-22 160.4 11.2 104 535-640 15-124 (137)
32 1v27_A Regulating synaptic mem 99.7 1.1E-17 3.9E-22 163.1 9.1 106 535-642 20-135 (141)
33 1a25_A CALB, protein kinase C 99.7 2.4E-17 8.2E-22 162.5 11.2 104 535-640 30-139 (149)
34 2q3x_A Regulating synaptic mem 99.7 2.4E-17 8.2E-22 166.3 11.3 106 535-642 29-141 (171)
35 1rlw_A Phospholipase A2, CALB 99.7 8.5E-17 2.9E-21 153.6 14.5 111 2-129 1-123 (126)
36 2chd_A Rabphilin-3A, exophilin 99.7 2.7E-17 9.1E-22 160.7 11.0 105 535-640 28-140 (142)
37 2dmg_A KIAA1228 protein; beta- 99.7 3.3E-17 1.1E-21 160.1 10.9 107 535-643 23-138 (142)
38 2nq3_A Itchy homolog E3 ubiqui 99.7 9.1E-17 3.1E-21 162.0 13.9 120 3-132 35-162 (173)
39 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.1E-16 3.7E-21 155.5 13.6 105 535-640 21-133 (138)
40 3fbk_A RGS3, RGP3, regulator o 99.7 7.2E-17 2.5E-21 159.8 12.2 106 534-641 25-138 (153)
41 3pyc_A E3 ubiquitin-protein li 99.7 3E-16 1E-20 151.2 15.9 117 3-129 4-131 (132)
42 2enp_A B/K protein; C2 type 1, 99.7 3.1E-17 1.1E-21 161.2 9.1 108 535-643 25-144 (147)
43 2cm5_A Rabphilin-3A; protein t 99.7 1.6E-16 5.3E-21 159.6 12.8 91 535-626 36-133 (166)
44 1tjx_A Similar to synaptotagmi 99.7 2E-16 6.8E-21 157.6 12.7 105 535-640 24-147 (159)
45 3n5a_A Synaptotagmin-7; calciu 99.7 2E-16 6.9E-21 153.5 11.5 102 535-639 15-123 (138)
46 2r83_A Synaptotagmin-1; C2A-C2 99.7 6.7E-16 2.3E-20 169.1 16.0 123 535-658 18-147 (284)
47 2b3r_A Phosphatidylinositol-4- 99.6 7.3E-16 2.5E-20 148.9 12.7 98 3-108 19-129 (134)
48 1w15_A Synaptotagmin IV; metal 99.6 1.7E-16 5.8E-21 157.1 7.8 103 535-640 29-138 (153)
49 3jzy_A Intersectin 2; C2 domai 99.6 1E-15 3.4E-20 182.0 14.9 119 534-657 385-507 (510)
50 3l9b_A Otoferlin; C2-domain, b 99.6 3.8E-15 1.3E-19 140.9 13.7 121 2-134 19-143 (144)
51 3nsj_A Perforin-1; pore formin 99.6 1.9E-15 6.4E-20 177.4 14.3 113 535-660 393-506 (540)
52 2cjt_A UNC-13 homolog A, MUNC1 99.6 4.3E-15 1.5E-19 142.7 13.8 98 1-108 2-103 (131)
53 2z0u_A WW domain-containing pr 99.6 8.5E-16 2.9E-20 152.1 8.9 99 3-108 42-154 (155)
54 1dqv_A Synaptotagmin III; beta 99.6 3.1E-15 1.1E-19 164.8 13.7 124 534-658 18-149 (296)
55 3f04_A Synaptotagmin-1; C2A, c 99.6 3.4E-15 1.2E-19 145.9 12.2 98 3-108 33-141 (143)
56 1wfm_A Synaptotagmin XIII; C2 99.6 4.9E-15 1.7E-19 143.8 13.0 99 3-109 25-132 (138)
57 1rsy_A Synaptotagmin I; calciu 99.6 4.2E-15 1.4E-19 146.9 12.2 98 3-108 41-149 (152)
58 3fdw_A Synaptotagmin-like prot 99.6 1.7E-15 5.8E-20 149.0 9.3 101 3-112 22-136 (148)
59 2bwq_A Regulating synaptic mem 99.6 4E-15 1.4E-19 142.5 11.0 97 3-108 17-129 (129)
60 3l9b_A Otoferlin; C2-domain, b 99.6 7.8E-15 2.7E-19 138.7 12.4 119 537-661 22-143 (144)
61 1a25_A CALB, protein kinase C 99.6 1.7E-15 6E-20 149.1 8.5 98 3-109 30-139 (149)
62 1rh8_A Piccolo protein; beta-s 99.6 2E-15 6.8E-20 147.3 8.6 98 3-108 17-137 (142)
63 2cjs_A UNC-13 homolog A, MUNC1 99.6 6.9E-15 2.4E-19 147.1 12.4 122 533-662 11-145 (167)
64 3rdl_A Protein kinase C alpha 99.6 3.6E-15 1.2E-19 144.4 9.8 100 3-111 15-126 (137)
65 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.6E-14 5.3E-19 138.8 13.9 97 535-639 4-103 (131)
66 2d8k_A Synaptotagmin VII; exoc 99.6 7.6E-15 2.6E-19 143.0 11.4 98 3-108 25-134 (141)
67 2chd_A Rabphilin-3A, exophilin 99.6 9.1E-15 3.1E-19 142.6 10.5 99 3-109 28-140 (142)
68 3fbk_A RGS3, RGP3, regulator o 99.6 1.4E-14 4.7E-19 143.3 11.5 103 2-111 25-139 (153)
69 1ugk_A Synaptotagmin IV, KIAA1 99.5 2E-14 6.9E-19 139.5 12.4 99 3-108 21-132 (138)
70 1v27_A Regulating synaptic mem 99.5 5.8E-15 2E-19 143.7 8.5 100 3-111 20-135 (141)
71 2q3x_A Regulating synaptic mem 99.5 9.5E-15 3.2E-19 147.3 10.1 97 3-108 29-138 (171)
72 2enp_A B/K protein; C2 type 1, 99.5 8E-15 2.7E-19 143.9 9.0 98 3-108 25-140 (147)
73 1djx_A PLC-D1, phosphoinositid 99.5 3.5E-14 1.2E-18 170.5 15.0 120 534-657 495-623 (624)
74 2dmg_A KIAA1228 protein; beta- 99.5 1.7E-14 5.8E-19 140.7 10.0 99 3-109 23-135 (142)
75 3n5a_A Synaptotagmin-7; calciu 99.5 2.9E-14 9.9E-19 138.2 11.4 86 3-93 15-113 (138)
76 1tjx_A Similar to synaptotagmi 99.5 3.5E-14 1.2E-18 141.3 11.7 101 3-108 24-146 (159)
77 2cm5_A Rabphilin-3A; protein t 99.5 4.4E-14 1.5E-18 141.6 12.5 101 3-108 36-158 (166)
78 1w15_A Synaptotagmin IV; metal 99.5 7.9E-14 2.7E-18 137.8 12.7 84 3-91 29-125 (153)
79 1cjy_A CPLA2, protein (cytosol 99.5 2.4E-14 8.3E-19 172.9 9.6 105 534-640 16-126 (749)
80 2cjs_A UNC-13 homolog A, MUNC1 99.5 2E-13 6.8E-18 136.5 12.7 84 3-95 13-100 (167)
81 3jzy_A Intersectin 2; C2 domai 99.5 1.9E-13 6.4E-18 162.4 14.4 114 4-130 387-507 (510)
82 3nsj_A Perforin-1; pore formin 99.4 1.6E-12 5.5E-17 152.6 14.5 105 4-131 394-504 (540)
83 3bxj_A RAS GTPase-activating p 99.4 3.6E-14 1.2E-18 166.2 -0.6 99 535-640 10-116 (483)
84 1djx_A PLC-D1, phosphoinositid 99.3 6.3E-12 2.1E-16 151.0 16.0 114 3-130 496-623 (624)
85 1cjy_A CPLA2, protein (cytosol 99.3 1.7E-11 5.8E-16 148.2 13.5 97 3-108 17-125 (749)
86 3pfq_A PKC-B, PKC-beta, protei 99.2 9.2E-12 3.1E-16 152.5 10.3 104 535-640 171-280 (674)
87 3bxj_A RAS GTPase-activating p 99.2 5.7E-13 1.9E-17 156.1 -0.6 124 3-132 10-158 (483)
88 3qr0_A Phospholipase C-beta (P 99.1 1.1E-10 3.7E-15 142.6 12.3 112 535-658 649-771 (816)
89 3ohm_B 1-phosphatidylinositol- 99.1 1.1E-10 3.7E-15 143.3 10.6 112 535-658 724-845 (885)
90 2zkm_X 1-phosphatidylinositol- 99.1 1.8E-10 6.3E-15 141.5 11.1 111 534-656 676-797 (799)
91 3ohm_B 1-phosphatidylinositol- 99.1 5.4E-10 1.9E-14 137.2 13.3 111 3-131 724-845 (885)
92 3qr0_A Phospholipase C-beta (P 99.0 8.3E-10 2.8E-14 134.9 14.6 111 3-131 649-771 (816)
93 2zkm_X 1-phosphatidylinositol- 99.0 1.1E-09 3.7E-14 134.7 13.5 110 2-129 676-797 (799)
94 3pfq_A PKC-B, PKC-beta, protei 98.9 1.1E-09 3.7E-14 134.1 9.5 98 3-109 171-280 (674)
95 1yrk_A NPKC-delta, protein kin 98.8 2.7E-08 9.1E-13 91.3 12.6 108 535-655 5-122 (126)
96 2enj_A NPKC-theta, protein kin 98.8 4.3E-08 1.5E-12 91.1 11.6 110 535-657 9-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.7 8.6E-08 2.9E-12 88.0 10.3 105 4-130 6-124 (126)
98 2enj_A NPKC-theta, protein kin 98.6 5.7E-08 2E-12 90.3 8.4 105 4-130 10-129 (138)
99 1em2_A MLN64 protein; beta bar 93.6 0.76 2.6E-05 47.4 13.7 148 818-974 71-226 (229)
100 2r55_A STAR-related lipid tran 90.5 5.4 0.00019 40.9 15.7 149 818-974 72-229 (231)
101 2pcs_A Conserved protein; stru 90.1 9.9 0.00034 36.1 16.4 141 816-977 6-148 (162)
102 1jss_A Stard4, cholesterol-reg 88.7 3.3 0.00011 42.3 12.4 146 818-972 72-222 (224)
103 3p0l_A Steroidogenic acute reg 87.3 3.2 0.00011 42.4 11.2 146 818-972 60-213 (221)
104 2wxf_A Phosphatidylinositol-4, 87.0 3.1 0.00011 51.7 12.5 92 2-93 215-325 (940)
105 1icx_A Protein LLR18A, LLPR10. 86.9 11 0.00038 36.0 14.1 145 817-979 7-153 (155)
106 2wxf_A Phosphatidylinositol-4, 86.8 3.2 0.00011 51.5 12.5 88 535-625 216-323 (940)
107 2qim_A PR10.2B; trans-zeatin, 85.3 18 0.00062 34.6 14.7 146 817-979 8-155 (158)
108 1tw0_A Pathogenesis-related cl 83.8 21 0.00071 34.1 14.3 146 817-979 7-154 (157)
109 3hhm_A Phosphatidylinositol-4, 81.9 7.8 0.00027 48.6 12.8 90 535-626 354-455 (1091)
110 1e09_A PRU AV 1; allergen, maj 80.6 23 0.00078 33.9 13.3 143 817-979 7-155 (159)
111 2ns9_A Hypothetical protein AP 80.0 39 0.0013 31.5 15.0 140 814-976 14-155 (157)
112 3hhm_A Phosphatidylinositol-4, 79.5 7.7 0.00026 48.6 11.6 90 2-93 353-456 (1091)
113 1ln1_A PC-TP, phosphatidylchol 79.4 19 0.00064 36.1 12.9 145 817-973 56-209 (214)
114 2flh_A Cytokinin-specific bind 79.1 24 0.00082 33.6 12.8 138 817-978 7-153 (155)
115 1e7u_A Phosphatidylinositol 3- 76.9 15 0.00051 45.7 13.0 107 536-659 218-348 (961)
116 3l4c_A Dedicator of cytokinesi 74.7 8.1 0.00028 39.1 8.2 39 31-69 78-118 (220)
117 4a8u_A Major pollen allergen B 73.1 66 0.0023 30.7 14.5 145 818-979 8-155 (159)
118 2hth_B Vacuolar protein sortin 71.0 21 0.00072 33.5 9.7 95 678-777 38-132 (140)
119 3qsz_A STAR-related lipid tran 70.0 46 0.0016 32.4 12.8 143 818-973 32-179 (189)
120 1e7u_A Phosphatidylinositol 3- 69.3 19 0.00064 44.8 11.4 92 2-93 216-331 (961)
121 3kl1_A PYL2, putative uncharac 68.7 94 0.0032 30.6 15.5 150 813-978 35-184 (190)
122 2wql_A Major allergen DAU C 1; 68.6 81 0.0028 29.9 15.0 142 818-977 9-153 (154)
123 3l4c_A Dedicator of cytokinesi 67.8 60 0.002 32.8 12.7 40 568-607 77-118 (220)
124 2y3a_A Phosphatidylinositol-4, 66.8 5.1 0.00017 50.4 5.7 68 2-69 351-430 (1092)
125 2y3a_A Phosphatidylinositol-4, 64.8 5.2 0.00018 50.4 5.2 70 535-607 352-430 (1092)
126 2vjg_A Major allergen DAU C 1; 64.1 99 0.0034 29.2 14.4 143 817-977 8-153 (154)
127 2i9y_A Major latex protein-lik 62.4 73 0.0025 30.5 12.1 143 817-978 21-165 (166)
128 3rws_A MTN13 protein; zeatin, 61.2 91 0.0031 30.0 12.4 142 817-979 13-161 (168)
129 2yrb_A Protein fantom; beta sa 59.8 61 0.0021 30.9 10.5 116 4-131 18-150 (156)
130 3jrs_A PYL1, putative uncharac 55.6 63 0.0021 32.4 10.4 115 813-943 54-168 (208)
131 2pso_A STAR-related lipid tran 52.4 78 0.0027 32.3 11.0 104 867-978 120-228 (237)
132 2yrb_A Protein fantom; beta sa 49.9 49 0.0017 31.5 8.0 122 535-659 17-151 (156)
133 2l9p_A Uncharacterized protein 49.8 1.2E+02 0.0041 28.6 11.3 144 815-973 10-155 (164)
134 2cay_A VPS36 PH domain, vacuol 49.4 42 0.0014 31.6 7.5 86 677-776 50-135 (145)
135 2vq5_A S-norcoclaurine synthas 49.0 2.1E+02 0.0072 28.3 13.3 142 816-980 32-181 (201)
136 3p9v_A Uncharacterized protein 47.2 1.9E+02 0.0063 27.2 14.8 63 911-977 88-151 (161)
137 3k3k_A Abscisic acid receptor 45.6 1.2E+02 0.0042 30.3 10.7 110 813-944 50-162 (211)
138 2e3n_A Lipid-transfer protein 44.1 87 0.003 32.2 9.9 150 819-976 79-249 (255)
139 3f08_A Uncharacterized protein 41.1 2.2E+02 0.0075 26.3 13.7 130 818-978 7-139 (146)
140 2d4r_A Hypothetical protein TT 39.7 2E+02 0.0068 25.4 12.4 57 917-977 88-144 (147)
141 2lf2_A Uncharacterized protein 38.9 2.6E+02 0.0088 26.5 14.5 145 815-973 18-164 (175)
142 3p51_A Uncharacterized protein 36.4 2.8E+02 0.0095 26.1 12.9 134 818-979 7-144 (160)
143 1xfs_A NC_840354, conserved hy 24.7 3.9E+02 0.013 25.1 10.4 22 815-836 12-33 (178)
144 3oji_A Abscisic acid receptor 24.4 5E+02 0.017 25.3 15.1 104 814-924 31-135 (189)
145 2ldk_A Uncharacterized protein 22.4 4.7E+02 0.016 24.3 14.1 144 815-976 14-159 (172)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1.4e-20 Score=206.50 Aligned_cols=166 Identities=23% Similarity=0.397 Sum_probs=139.4
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC---eEEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecCCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK---HKSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHNDD 71 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~---~~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~~ 71 (985)
.+.|.|+|++|+||+ .+||||++++++ ++++|+++++++||.|||+|.|.+. +.....|.|+|||+|
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d-- 95 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD-- 95 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC--
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC--
Confidence 578999999999998 689999999964 4689999999999999999999986 235689999999999
Q ss_pred CCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEecCCeeeEEEEeeeccCCCCC
Q 001987 72 SGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNGKGHNLSSNRLLYLHSNVSSN 151 (985)
Q Consensus 72 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~~~~l~v~v~~~~a~~L~~~ 151 (985)
+ .+++++||++.++|.++..+ .....|++|......+ ....|+|++++.|.+..+.+.+.|+. |++|+.+
T Consensus 96 -~--~~~~~~lG~~~i~l~~l~~~---~~~~~w~~L~~~~~~~--~~~~G~i~l~l~~~p~~~~l~v~v~~--a~~L~~~ 165 (284)
T 2r83_A 96 -R--FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQSAEKEE--QEKLGDICFSLRYVPTAGKLTVVILE--AKNLKKM 165 (284)
T ss_dssp -S--SSCCCEEEEEEEEGGGCCCS---SCEEEEEECBCCSSCC--CCCCCEEEEEEEEETTTTEEEEEEEE--EESCCCC
T ss_pred -C--CCCCceeEEEEEcchhcccC---CcceeEEEeecccccc--ccccccEEEEEEecCcCCceEEEEEE--eECCCCc
Confidence 4 57899999999999999765 2457899998433221 34689999999999999999988886 8899999
Q ss_pred CCCCCCCCeEEEEEcCCCCCCcccccccc
Q 001987 152 ESKELEDPCVLSHDVSCSKAPCLDVTEGN 180 (985)
Q Consensus 152 d~~g~sdP~vkv~l~~~~~~~~~k~~~~~ 180 (985)
|..|.+||||++++..++....+++|+..
T Consensus 166 d~~~~~dpyv~v~~~~~~~~~~~~kT~v~ 194 (284)
T 2r83_A 166 DVGGLSDPYVKIHLMQNGKRLKKKKTTIK 194 (284)
T ss_dssp STTSCCCEEEEEEEEETTEEEEEEECCCC
T ss_pred CCCCCcCeEEEEEEEeCCcEeeeecccee
Confidence 99999999999999887655445555444
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.84 E-value=2.7e-20 Score=205.43 Aligned_cols=167 Identities=24% Similarity=0.347 Sum_probs=137.7
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEE---CCeEEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecCCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQI---GKHKSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHNDD 71 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l---~~~~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~~ 71 (985)
.+.|.|+|++|+||+ .+||||+|++ +.++++|+++++|+||.|||+|.|.+. +.....|.|+|||+|
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d-- 96 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD-- 96 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC--
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC--
Confidence 578999999999998 5899999999 356799999999999999999999985 234579999999999
Q ss_pred CCCCCCCCCeeEEEEEe-CccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEecCCeeeEEEEeeeccCCCC
Q 001987 72 SGLFGSSGELMGRVRVP-VSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNGKGHNLSSNRLLYLHSNVSS 150 (985)
Q Consensus 72 ~~~~~~~d~~lG~~~i~-L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~~~~l~v~v~~~~a~~L~~ 150 (985)
+ .+++++||++.++ +.++.... .....|++|.... .. ....|+|.+++.|.+..+.+.+.|++ |++|+.
T Consensus 97 -~--~~~~~~iG~~~i~~l~~~~~~~--~~~~~w~~L~~~~-~~--~~~~G~i~vsl~y~~~~~~l~v~v~~--a~~L~~ 166 (296)
T 1dqv_A 97 -R--FSRHDLIGQVVLDNLLELAEQP--PDRPLWRDILEGG-SE--KADLGELNFSLCYLPTAGLLTVTIIK--ASNLKA 166 (296)
T ss_dssp -S--SSCCCEEEEEECCCTTGGGSSC--SSCCCCEECBCCS-SC--CSCCCEEEEEEEEETTTTEEEEEEEE--EESCCC
T ss_pred -C--CCCCceEEEEEeccccccccCC--ccceeeecccccc-cc--ccccceEEEEEEeccccceeEEEEEE--eecCCc
Confidence 4 5789999999996 55544321 2356799998332 22 44689999999999999999999886 899999
Q ss_pred CCCCCCCCCeEEEEEcCCCCCCccccccccc
Q 001987 151 NESKELEDPCVLSHDVSCSKAPCLDVTEGNH 181 (985)
Q Consensus 151 ~d~~g~sdP~vkv~l~~~~~~~~~k~~~~~~ 181 (985)
+|..|.+||||++++.++++...+++|+..+
T Consensus 167 ~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~ 197 (296)
T 1dqv_A 167 MDLTGFSDPYVKASLISEGRRLKKRKTSIKK 197 (296)
T ss_dssp CSSSSCCCEEEEECCCTTCCTTSCEECCCCC
T ss_pred cCCCCCCCcEEEEEEEeCCcCccceecceec
Confidence 9999999999999999877666666666554
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=186.39 Aligned_cols=116 Identities=22% Similarity=0.314 Sum_probs=102.5
Q ss_pred CCCeEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCEE-EEeeeccCCCCCeEeEEEEEEeecCCCCEEEE
Q 001987 533 GDGWVLTVALVEGVNLASSEM----------TGLSDPYVVFTCNGKT-RTSSVQLQTCDPQWHDILEFDAMEEPPSVLDV 601 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~----------~g~~DPyv~v~~~~~~-~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v 601 (985)
...|.|+|+|++|+||+++|. .|.+||||++++++++ .+|+++++|+||+|||+|.|.+.. ...|.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~~ 103 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLEL 103 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEEE
Confidence 457899999999999999883 3679999999999865 699999999999999999999643 468999
Q ss_pred EEEecCCCCCCCCccceEEEEeeccccC----cccceEEEccccccCCcceeEEEEEeee
Q 001987 602 EVFDFDGPFDQATSLGHAEINFLKHTST----ELADMWVSLEGKLAQSAQSKVHLRIFLE 657 (985)
Q Consensus 602 ~V~D~d~~~~~dd~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~~~~~g~l~l~~~ls 657 (985)
+|||+|. +++||+||++.|+|.++..+ ...+.|++|++ +|+|+|++.++
T Consensus 104 ~V~D~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~------~G~i~l~l~~~ 156 (157)
T 2fk9_A 104 AVFHETP-LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP------EGKVFVVITLT 156 (157)
T ss_dssp EEEECCS-SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS------SCEEEEEEEEC
T ss_pred EEEECCC-CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC------CcEEEEEEEEE
Confidence 9999998 79999999999999998755 66899999973 79999999875
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=7.3e-20 Score=178.51 Aligned_cols=124 Identities=22% Similarity=0.310 Sum_probs=109.8
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCCeEeEEEEEEeecC---CCCEEEEEEEecCCCC
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEE---PPSVLDVEVFDFDGPF 610 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~~tlnP~Wne~f~f~v~~~---~~~~L~v~V~D~d~~~ 610 (985)
..|.|.|+|++|+||+..|. |.+||||++++++++++|+++++++||+|||+|.|.+... ....|.|+|||+|. +
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-~ 82 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-I 82 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC-S
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC-C
Confidence 45799999999999999998 9999999999999999999999999999999999996432 46799999999998 7
Q ss_pred CCCCccceEEEEeeccccCcccceEEE---ccccccCCcceeEEEEEeeecC
Q 001987 611 DQATSLGHAEINFLKHTSTELADMWVS---LEGKLAQSAQSKVHLRIFLENN 659 (985)
Q Consensus 611 ~~dd~lG~~~i~l~~l~~~~~~~~w~~---L~~~~~~~~~g~l~l~~~ls~~ 659 (985)
++|++||++.|+|.++..+...+.|++ |.+..+....|.|+|++.+...
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 899999999999999988888889988 6655555567999999977654
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=2.3e-19 Score=176.75 Aligned_cols=121 Identities=21% Similarity=0.381 Sum_probs=106.2
Q ss_pred CCCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCC--
Q 001987 533 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPF-- 610 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~-- 610 (985)
.+.|.|+|+|++|++|+++|.+|.+||||++++++++++|+++++++||+|||+|.|.+ ..+...|.|+|||+|. +
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v-~~~~~~l~~~v~d~d~-~~~ 91 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFEC-HNSSDRIKVRVLDEDD-DIK 91 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEE-CSTTCEEEEEEEECCC-SHH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEe-cCCCCEEEEEEEECCC-Ccc
Confidence 45789999999999999999999999999999999999999999999999999999995 4456899999999997 5
Q ss_pred ---------CCCCccceEEEEeeccccCcccceEEEcccccc-CCcceeEEEEEeee
Q 001987 611 ---------DQATSLGHAEINFLKHTSTELADMWVSLEGKLA-QSAQSKVHLRIFLE 657 (985)
Q Consensus 611 ---------~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~-~~~~g~l~l~~~ls 657 (985)
++|++||++.|+|.++ ....+.|++|....+ ....|.|+|++.++
T Consensus 92 ~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999998 345689999986433 33579999999775
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.7e-19 Score=174.24 Aligned_cols=120 Identities=23% Similarity=0.399 Sum_probs=106.2
Q ss_pred CCCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCCC
Q 001987 533 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQ 612 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~~ 612 (985)
...|.|+|+|++|++|+++|..|.+||||++++++++++|+++++++||+|||+|.|.+ .++...|.|+|||+|. +++
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~-~~~~~~l~i~V~d~d~-~~~ 87 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPI-KDIHDVLEVTVFDEDG-DKP 87 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEE-SCTTCEEEEEEEEEET-TEE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEe-cCCCCEEEEEEEECCC-CCC
Confidence 35689999999999999999999999999999999999999999999999999999995 4556899999999998 789
Q ss_pred CCccceEEEEeeccccCcccceEEEccccc-cCCcceeEEEEEee
Q 001987 613 ATSLGHAEINFLKHTSTELADMWVSLEGKL-AQSAQSKVHLRIFL 656 (985)
Q Consensus 613 dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~-~~~~~g~l~l~~~l 656 (985)
|++||++.|+|.++..+ ...|++|.... .....|.|+|++.+
T Consensus 88 ~~~lG~~~i~l~~l~~~--~~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 88 PDFLGKVAIPLLSIRDG--QPNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp EEECCBCEEEGGGCCSS--CCEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred CCeeEEEEEEHHHccCC--CceEEEeecCCCCCccceEEEEEEEE
Confidence 99999999999998664 36899998743 33567999998854
No 7
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.81 E-value=1.1e-19 Score=176.42 Aligned_cols=117 Identities=21% Similarity=0.342 Sum_probs=101.8
Q ss_pred CCeEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCEE-EEeeeccCCCCCeEeEEEEEEeecCCCCEEEE
Q 001987 534 DGWVLTVALVEGVNLASSEMTGL-----------SDPYVVFTCNGKT-RTSSVQLQTCDPQWHDILEFDAMEEPPSVLDV 601 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~-----------~DPyv~v~~~~~~-~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v 601 (985)
..|.|+|+|++|+||++.|.+|+ +||||+++++++. .+|+++++|+||+|||+|.|.+... ..|.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 45799999999999999886554 9999999998765 6999999999999999999997543 89999
Q ss_pred EEEecCCCCCCCCccceEEEEeeccccCc--ccceEEEccccccCCcceeEEEEEeeecC
Q 001987 602 EVFDFDGPFDQATSLGHAEINFLKHTSTE--LADMWVSLEGKLAQSAQSKVHLRIFLENN 659 (985)
Q Consensus 602 ~V~D~d~~~~~dd~lG~~~i~l~~l~~~~--~~~~w~~L~~~~~~~~~g~l~l~~~ls~~ 659 (985)
+|||+|. +++||+||++.|+|.++..+. ..+.|++|.+ .|+|+|++.+.+.
T Consensus 82 ~V~d~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~------~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 82 AVFHDAP-IGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP------EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEECCS-SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS------SCEEEEEEEEEEE
T ss_pred EEEeCCC-CCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC------CeEEEEEEEEEec
Confidence 9999998 799999999999999987643 3488999973 7899999988654
No 8
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.81 E-value=1.5e-19 Score=175.39 Aligned_cols=123 Identities=20% Similarity=0.340 Sum_probs=108.1
Q ss_pred CCCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCC
Q 001987 533 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFD 611 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~-~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~ 611 (985)
...|.|+|+|++|++|+..|..|.+||||++++++++++|++++ +++||+|||+|.|.+. .....|.|+|||+|. ++
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~-~~~~~l~~~V~d~~~-~~ 84 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVS-EGTTELKAKIFDKDV-GT 84 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEE-SSCCEEEEEECCSSS-CT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEEC-CCCCEEEEEEEECCC-CC
Confidence 35689999999999999999999999999999999999999998 8999999999999965 467899999999998 79
Q ss_pred CCCccceEEEEeecc-ccCcccceEEEccccccCCcceeEEEEEeeecC
Q 001987 612 QATSLGHAEINFLKH-TSTELADMWVSLEGKLAQSAQSKVHLRIFLENN 659 (985)
Q Consensus 612 ~dd~lG~~~i~l~~l-~~~~~~~~w~~L~~~~~~~~~g~l~l~~~ls~~ 659 (985)
+|++||++.|+|.++ ..+.....|++|. ......|.|+|++.+...
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~--~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVV--KDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEE--ETTEEEEEEEEEEEEEEC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEee--cCCccCEEEEEEEEEEeC
Confidence 999999999999998 4455678899998 233467999999976544
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=4.4e-19 Score=169.61 Aligned_cols=114 Identities=16% Similarity=0.289 Sum_probs=100.2
Q ss_pred CeEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---EEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASS---EMTGLSDPYVVFTCNG---KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~---d~~g~~DPyv~v~~~~---~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~ 608 (985)
.|.|+|+|++|+||+++ |.+|.+||||++++++ ++++|+++++++||+|||+|.|.+.......|.|+|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999984 6679999999999985 78999999999999999999999756667899999999998
Q ss_pred CCCCCCccceEEEEeeccccCcccceEEEccccccCCcceeEEEEE
Q 001987 609 PFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRI 654 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~g~l~l~~ 654 (985)
+ +|++||++.|+|.++..+.....|++|.+ ...|.|++++
T Consensus 82 -~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~----~~~g~i~~~l 121 (126)
T 1rlw_A 82 -V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ----VTEMVLEMSL 121 (126)
T ss_dssp -S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT----TEEEEEEEEE
T ss_pred -C-CCceeEEEEEEHHHccCCCcEEEEEEcCC----CceEEEEEEE
Confidence 5 58999999999999998888899999985 3455666655
No 10
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.1e-18 Score=172.77 Aligned_cols=122 Identities=19% Similarity=0.336 Sum_probs=99.1
Q ss_pred CCCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEec
Q 001987 533 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDF 606 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~ 606 (985)
...+.|+|+|++|+||+.+|.+|.+||||+++++. +.++|+++++++||+|||+|.|.+. .....|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC-TTTCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec-CCCCEEEEEEEEC
Confidence 34679999999999999999999999999999973 6889999999999999999999954 4567999999999
Q ss_pred CCCCCCCCccceEEEEeeccccCccc------ceEEEccccc-cCCcceeEEEEEee
Q 001987 607 DGPFDQATSLGHAEINFLKHTSTELA------DMWVSLEGKL-AQSAQSKVHLRIFL 656 (985)
Q Consensus 607 d~~~~~dd~lG~~~i~l~~l~~~~~~------~~w~~L~~~~-~~~~~g~l~l~~~l 656 (985)
|. +++|++||++.|+|.++..+... ..|++|.+.. .....|.|+|++.+
T Consensus 96 d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 151 (153)
T 3b7y_A 96 NR-LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTY 151 (153)
T ss_dssp CS-SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEE
T ss_pred CC-CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEE
Confidence 98 78999999999999998766543 5899998743 33567999999976
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=1.8e-18 Score=175.52 Aligned_cols=125 Identities=19% Similarity=0.351 Sum_probs=99.5
Q ss_pred CCCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEec
Q 001987 533 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDF 606 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~ 606 (985)
...|.|+|+|++|++|+.+|.+|.+||||++++++ ++++|+++++++||+|||.|.|.+. .....|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~-~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC-TTTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc-CCCCEEEEEEEEC
Confidence 45789999999999999999999999999999975 6789999999999999999999964 4567999999999
Q ss_pred CCCCCCCCccceEEEEeeccccCccc-c-----eEEEcccccc-CCcceeEEEEEeeecC
Q 001987 607 DGPFDQATSLGHAEINFLKHTSTELA-D-----MWVSLEGKLA-QSAQSKVHLRIFLENN 659 (985)
Q Consensus 607 d~~~~~dd~lG~~~i~l~~l~~~~~~-~-----~w~~L~~~~~-~~~~g~l~l~~~ls~~ 659 (985)
|. +++|++||++.|+|..+..+... + .|++|..... ....|.|+|++.+...
T Consensus 84 d~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NR-LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CC-CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 98 79999999999999998776433 2 7999987433 3357999999977655
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.77 E-value=3.5e-18 Score=164.76 Aligned_cols=119 Identities=13% Similarity=0.235 Sum_probs=100.0
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--EEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG--KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQ 612 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~--~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~~ 612 (985)
...|+|+|++|++|+++|.+|.+||||++++++ +.++|+++++|+||+|||+|.|.+... ..|.|+|||+|. +++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~-~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKK-IHK 80 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGG-TTS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCC-CCC
Confidence 357999999999999999999999999999974 889999999999999999999996443 359999999998 666
Q ss_pred ---CCccceEEEEeecc-ccCcccceEEEcccccc---CCcceeEEEEEee
Q 001987 613 ---ATSLGHAEINFLKH-TSTELADMWVSLEGKLA---QSAQSKVHLRIFL 656 (985)
Q Consensus 613 ---dd~lG~~~i~l~~l-~~~~~~~~w~~L~~~~~---~~~~g~l~l~~~l 656 (985)
|++||++.|++..+ ........|++|....+ ....|+|+|.+..
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999999987 33445578999986422 2347899988753
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.76 E-value=2.6e-18 Score=166.18 Aligned_cols=105 Identities=16% Similarity=0.271 Sum_probs=94.5
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCCeEeEEEEEE-eecC--CCCEEEEEEEe
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFD-AMEE--PPSVLDVEVFD 605 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~~~~~tlnP~Wne~f~f~-v~~~--~~~~L~v~V~D 605 (985)
..+.|.|+|++|+||+. +.+|.+||||++++ +..+++|+++++|+||+|||+|.|. +... ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 35799999999999997 77899999999999 4578999999999999999999999 6432 45799999999
Q ss_pred cCCCCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 606 FDGPFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 606 ~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
+|. +++|++||++.|+|.++..+...+.|++|.+
T Consensus 97 ~d~-~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 97 AES-LRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CCS-SSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCC-CCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 998 7999999999999999988888899999986
No 14
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.76 E-value=1.3e-17 Score=164.13 Aligned_cols=118 Identities=30% Similarity=0.549 Sum_probs=99.6
Q ss_pred CCCcEEEEEEEEeecCC------CCCcEEEEEECCeEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCC
Q 001987 1 MVSTRLYVYVLQGQDLL------AKDSYVKVQIGKHKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGL 74 (985)
Q Consensus 1 ~~~~~L~V~V~~Ar~L~------~~DPyv~v~l~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~ 74 (985)
+.+++|+|+|++|+||+ .+||||++++++++++|+++++|+||.|||+|.|.+. .....|.|+|||+| .+
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~-~~~~~l~~~v~d~d---~~ 89 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECH-NSSDRIKVRVLDED---DD 89 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEEC-STTCEEEEEEEECC---CS
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEec-CCCCEEEEEEEECC---CC
Confidence 35689999999999998 6899999999999999999999999999999999995 34588999999999 31
Q ss_pred ---------CCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEE
Q 001987 75 ---------FGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLN 130 (985)
Q Consensus 75 ---------~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~ 130 (985)
..+++++||++.+||.++.. ....||+|. ++..+ ....|+|+|+++|.
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l~~-----~~~~w~~L~-~~~~~--~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTLSG-----EMDVWYNLD-KRTDK--SAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGCCS-----EEEEEEECB-CSSTT--CCCCCEEEEEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHCcC-----CCCEEEEcc-cCCCC--CCCceEEEEEEEEE
Confidence 02689999999999999943 256899999 44332 44789999999985
No 15
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.75 E-value=1e-17 Score=162.47 Aligned_cols=115 Identities=18% Similarity=0.399 Sum_probs=98.5
Q ss_pred CCCcEEEEEEEEeecCC------C-----------CCcEEEEEECCeE-EeecCccCCCCCeEeeEEEEEEecCCCceEE
Q 001987 1 MVSTRLYVYVLQGQDLL------A-----------KDSYVKVQIGKHK-SKSRILKNNSNPVWNEEFVFRVHNIDDEELV 62 (985)
Q Consensus 1 ~~~~~L~V~V~~Ar~L~------~-----------~DPyv~v~l~~~~-~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~ 62 (985)
|..+.|+|+|++|+||+ . +||||+|++++.. .+|+++++|+||.|||+|.|.+... ..|.
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~ 80 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIE 80 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEE
Confidence 45789999999999998 3 8999999998765 7999999999999999999998644 8999
Q ss_pred EEEEecCCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEecC
Q 001987 63 VSVFQHNDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNGKG 133 (985)
Q Consensus 63 ~~V~D~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~~ 133 (985)
|+|||+| + .++|++||++.++|.++...+. .....|++|. +.|+|+|.++|.+.+
T Consensus 81 ~~V~d~d---~--~~~dd~iG~~~i~l~~l~~~~~-~~~~~w~~L~----------~~G~i~l~l~~~~~~ 135 (136)
T 1gmi_A 81 LAVFHDA---P--IGYDDFVANCTIQFEELLQNGS-RHFEDWIDLE----------PEGKVYVIIDLSGSS 135 (136)
T ss_dssp EEEEECC---S--SSSCEEEEEEEEEHHHHTSTTC-SEEEEEEECB----------SSCEEEEEEEEEEEE
T ss_pred EEEEeCC---C--CCCCCEEEEEEEEHHHhcccCC-CCccEEEEcC----------CCeEEEEEEEEEecC
Confidence 9999999 4 6789999999999999986532 2237899987 369999999997653
No 16
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.74 E-value=2.2e-17 Score=163.50 Aligned_cols=120 Identities=30% Similarity=0.516 Sum_probs=100.1
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC------eEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK------HKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~------~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~ 70 (985)
.+.|+|+|++|+||+ .+||||+|++.+ ..++|+++++|+||.|||+|.|.+. .....|.|+|||+|
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~~~l~~~V~d~d- 96 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDEN- 96 (153)
T ss_dssp CEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC-TTTCEEEEEEEECC-
T ss_pred ccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec-CCCCEEEEEEEECC-
Confidence 468999999999999 689999999973 5689999999999999999999994 45689999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCC---CCCCeEEEeecCCCCCCCCccccEEEEEEEEEe
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNH---MLPPTWFSLETPKTRKFTNKDCGKILLTISLNG 131 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~---~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~ 131 (985)
+ .+++++||++.++|.++...... .....||+|. ++.++ ....|+|+|+++|.|
T Consensus 97 --~--~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~-~~~~~--~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 97 --R--LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLH-PRSHK--SRVKGYLRLKMTYLP 153 (153)
T ss_dssp --S--SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECB-CSSTT--CCCCSEEEEEEEECC
T ss_pred --C--CcCCCeeEEEEEEHHHcccCCCcccccccccccccc-cccCC--CCcceEEEEEEEEeC
Confidence 4 57899999999999999876431 2236999998 44322 457899999999964
No 17
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=9.6e-18 Score=169.18 Aligned_cols=120 Identities=16% Similarity=0.215 Sum_probs=99.8
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCCCC
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 613 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~~d 613 (985)
..+.|+|+|++|++|+..+..+.+||||++++++++++|+++++|+||+|||+|.|.+ .+...|.|+|||+|. +++|
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v--~~~~~L~~~V~D~d~-~~~d 110 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIV--TPVSKLHFRVWSHQT-LKSD 110 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEE--CTTCEEEEEEEECCS-SSCC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEe--CCCCEEEEEEEECCC-CCCC
Confidence 4678999999999999444455699999999999999999999999999999999996 347899999999998 7899
Q ss_pred CccceEEEEeeccccCc-----ccceEEEccccc-cCCcceeEEEEEee
Q 001987 614 TSLGHAEINFLKHTSTE-----LADMWVSLEGKL-AQSAQSKVHLRIFL 656 (985)
Q Consensus 614 d~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~-~~~~~g~l~l~~~l 656 (985)
++||++.|+|.++..+. ....|++|.... .....|+|++.+.+
T Consensus 111 d~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred ceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence 99999999999976432 126799998742 23457999888853
No 18
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=4.9e-18 Score=165.75 Aligned_cols=107 Identities=22% Similarity=0.463 Sum_probs=95.8
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CEEEEeeeccCCCCCeEeEEEEEEeec---CCCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~---~~~~kT~~~~~tlnP~Wne~f~f~v~~---~~~~~L~v~V~D~d~ 608 (985)
.+.|+|+|++|+||+.+|.+|.+||||++++. .++++|+++++++||+|||+|.|.+.. .....|.|+|||+|.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 46899999999999999999999999999994 468999999999999999999998532 235789999999998
Q ss_pred CCCCCCccceEEEEeeccccCcccceEEEccccc
Q 001987 609 PFDQATSLGHAEINFLKHTSTELADMWVSLEGKL 642 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 642 (985)
+++|++||++.|+|.++..+...+.|++|.+..
T Consensus 105 -~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 105 -FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp -SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred -CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 799999999999999998888889999998743
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.74 E-value=2.8e-18 Score=168.96 Aligned_cols=109 Identities=26% Similarity=0.356 Sum_probs=94.8
Q ss_pred CeEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEec
Q 001987 535 GWVLTVALVEGVNLASSE-MTGLSDPYVVFTCN-----GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDF 606 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d-~~g~~DPyv~v~~~-----~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~ 606 (985)
.+.|.|+|++|+||++.| .+|.+||||++++. ..+++|+++++|+||+|||+|.|.+... ....|.|+|||+
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 468999999999999998 68999999999996 3489999999999999999999996433 245799999999
Q ss_pred CCCCCCCCccceEEEEeeccccCcccceEEEccccccC
Q 001987 607 DGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQ 644 (985)
Q Consensus 607 d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~ 644 (985)
|. +++|++||++.|+|.++..+...+.|++|.++...
T Consensus 102 d~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 102 GR-FGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp CG-GGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred CC-CcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence 98 78999999999999999888788899999986443
No 20
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.2e-17 Score=161.25 Aligned_cols=116 Identities=28% Similarity=0.475 Sum_probs=99.9
Q ss_pred CCcEEEEEEEEeecCC------CCCcEEEEEECCeEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCCC
Q 001987 2 VSTRLYVYVLQGQDLL------AKDSYVKVQIGKHKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGLF 75 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~------~~DPyv~v~l~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~~ 75 (985)
..+.|+|+|++|+||+ .+||||++++++++.+|+++++++||.|||+|.|.+. .....|.|+|||+| .
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~-~~~~~l~i~V~d~d---~-- 84 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIK-DIHDVLEVTVFDED---G-- 84 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEES-CTTCEEEEEEEEEE---T--
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEec-CCCCEEEEEEEECC---C--
Confidence 3578999999999999 6899999999999999999999999999999999995 44688999999999 4
Q ss_pred CCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEe
Q 001987 76 GSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNG 131 (985)
Q Consensus 76 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~ 131 (985)
.+++++||++.++|.++..+ ...|++|..+ ..+ ....|+|+|+++|..
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~-----~~~w~~L~~~-~~~--~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDG-----QPNCYVLKNK-DLE--QAFKGVIYLEMDLIY 132 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSS-----CCEECCCBCS-CTT--SCCSSEEEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCC-----CceEEEeecC-CCC--CccceEEEEEEEEEe
Confidence 57899999999999999653 3589999833 322 457899999999864
No 21
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=2.7e-18 Score=170.10 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=92.5
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEec
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDF 606 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~ 606 (985)
.+.|+|+|++|+||+++|.+|.+||||++++.. .+++|+++++|+||+|||+|.|.+... ....|.|+|||+
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~ 121 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTT 121 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEEC
Confidence 468999999999999999999999999999964 379999999999999999999996432 256899999999
Q ss_pred CCCCCCCCccceEEEEeecccc-CcccceEEEcc
Q 001987 607 DGPFDQATSLGHAEINFLKHTS-TELADMWVSLE 639 (985)
Q Consensus 607 d~~~~~dd~lG~~~i~l~~l~~-~~~~~~w~~L~ 639 (985)
|. +++|++||++.|+|.++.. +.....|++|.
T Consensus 122 d~-~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 122 DR-SHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp CT-TSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CC-CCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 98 7999999999999999853 56778999986
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=9.3e-18 Score=166.00 Aligned_cols=105 Identities=23% Similarity=0.403 Sum_probs=95.3
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC---NGKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDGP 609 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d~~ 609 (985)
.+.|+|+|++|+||+..|.+|.+||||++++ +.++++|+++++++||+|||+|.|.+... ....|.|+|||+|.
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 119 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR- 119 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS-
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC-
Confidence 4689999999999999999999999999999 45688999999999999999999986432 35799999999998
Q ss_pred CCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 610 FDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 610 ~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
+++|++||++.|+|.++..+...+.|++|.+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 7899999999999999988888899999985
No 23
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.73 E-value=7.8e-18 Score=164.72 Aligned_cols=105 Identities=23% Similarity=0.403 Sum_probs=95.7
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC---NGKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDGP 609 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d~~ 609 (985)
.+.|.|+|++|++|+..|.+|.+||||++++ +.++++|+++++++||+|||+|.|.+... ....|.|+|||+|.
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 111 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR- 111 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS-
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC-
Confidence 4689999999999999999999999999999 56789999999999999999999996432 35799999999998
Q ss_pred CCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 610 FDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 610 ~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
+++|++||++.|+|.++..+...+.|++|.+
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 7999999999999999998888999999985
No 24
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.2e-17 Score=159.74 Aligned_cols=120 Identities=23% Similarity=0.304 Sum_probs=101.5
Q ss_pred CCcEEEEEEEEeecCC-----CCCcEEEEEECCeEEeecCccCCCCCeEeeEEEEEEecC---CCceEEEEEEecCCCCC
Q 001987 2 VSTRLYVYVLQGQDLL-----AKDSYVKVQIGKHKSKSRILKNNSNPVWNEEFVFRVHNI---DDEELVVSVFQHNDDSG 73 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~-----~~DPyv~v~l~~~~~kT~v~~~t~nP~wnE~f~f~v~~~---~~~~L~~~V~D~d~~~~ 73 (985)
..+.|.|+|++|+||+ .+||||+|++.+++++|+++++++||+|||+|.|.+..+ ....|.|+|||+| .
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d---~ 81 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE---T 81 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT---C
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC---C
Confidence 4679999999999999 589999999999999999999999999999999998532 5689999999999 4
Q ss_pred CCCCCCCeeEEEEEeCccccccCCCCCCCeEEE---eecCCCCCCCCccccEEEEEEEEEecC
Q 001987 74 LFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFS---LETPKTRKFTNKDCGKILLTISLNGKG 133 (985)
Q Consensus 74 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~---L~~~~~~~~~~~~~G~I~lsl~~~~~~ 133 (985)
.+++++||++.++|.++..+. ....|++ |.++.. ....|+|+|+++|.+..
T Consensus 82 --~~~~~~lG~~~i~l~~l~~~~---~~~~w~~l~~l~~~~~----~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 82 --IGQNKLIGTATVALKDLTGDQ---SRSLPYKLISLLNEKG----QDTGATIDLVIGYDPPS 135 (140)
T ss_dssp --SSSCCCCEEEEEEGGGTCSSS---CEEEEEEEEEEECTTC----CEEEEEEEEEEEECCCB
T ss_pred --CCCCceEEEEEEEHHHhccCC---CceeEEeeeeccCCCC----CCCCCEEEEEEEEECCC
Confidence 578999999999999997552 3568988 553221 34679999999998753
No 25
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.73 E-value=4.3e-17 Score=165.41 Aligned_cols=121 Identities=28% Similarity=0.490 Sum_probs=98.0
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC------eEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK------HKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~------~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~ 70 (985)
.+.|+|+|++|++|+ .+||||+|++.+ .+++|+++++++||.|||+|.|.+. .....|.|+|||+|
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~-~~~~~L~~~V~d~d- 84 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDEN- 84 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC-TTTCEEEEEEEECC-
T ss_pred cEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc-CCCCEEEEEEEECC-
Confidence 578999999999998 689999999975 5689999999999999999999994 55679999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCC---CCCCeEEEeecCCCCCCCCccccEEEEEEEEEec
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNH---MLPPTWFSLETPKTRKFTNKDCGKILLTISLNGK 132 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~---~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~ 132 (985)
+ .++++|||++.++|.++...... .....||+|. ++..+ ....|+|+|++.|.+.
T Consensus 85 --~--~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~-~~~~~--~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 85 --R--LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLH-PRSHK--SRVKGYLRLKMTYLPK 142 (176)
T ss_dssp --------CEEEEEEEEESCSCCBC------CCCCEEEECB-CSSTT--CCCCSEEEEEEEECC-
T ss_pred --C--CCCCcEEEEEEEEHHHccccCCcccccccccEEEcc-ccCCC--CccCEEEEEEEEEEeC
Confidence 4 57899999999999999876321 2234899998 44332 4578999999999876
No 26
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=164.09 Aligned_cols=112 Identities=20% Similarity=0.344 Sum_probs=95.4
Q ss_pred CCcEEEEEEEEeecCC----------------CCCcEEEEEECCeE-EeecCccCCCCCeEeeEEEEEEecCCCceEEEE
Q 001987 2 VSTRLYVYVLQGQDLL----------------AKDSYVKVQIGKHK-SKSRILKNNSNPVWNEEFVFRVHNIDDEELVVS 64 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~----------------~~DPyv~v~l~~~~-~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~ 64 (985)
..+.|+|+|++|+||+ .+||||+|++++++ .||+++++|+||.|||+|.|.+.+ ...|.|+
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~~~ 104 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLELA 104 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEEEE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEEEE
Confidence 4579999999999998 17999999998866 799999999999999999999853 4689999
Q ss_pred EEecCCCCCCCCCCCCeeEEEEEeCcccccc-CCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEE
Q 001987 65 VFQHNDDSGLFGSSGELMGRVRVPVSSIAAE-DNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLN 130 (985)
Q Consensus 65 V~D~d~~~~~~~~~d~~lG~~~i~L~~l~~~-~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~ 130 (985)
|||+| + .++|++||++.|||.++..+ +.......||+|. +.|+|+|.++|.
T Consensus 105 V~D~d---~--~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~----------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHET---P--LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE----------PEGKVFVVITLT 156 (157)
T ss_dssp EEECC---S--SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB----------SSCEEEEEEEEC
T ss_pred EEECC---C--CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC----------CCcEEEEEEEEE
Confidence 99999 4 67899999999999998865 1113467899998 269999999883
No 27
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.1e-17 Score=160.57 Aligned_cols=103 Identities=19% Similarity=0.379 Sum_probs=87.7
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCCeEeEEEEEEeec---CCCCEEEEEEEec
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVFDF 606 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~~~~~tlnP~Wne~f~f~v~~---~~~~~L~v~V~D~ 606 (985)
.+.|.|+|++|+||+++|.+|.+||||++++ +.++++|+++++|+||+|||+|.|.+.. .....|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 4689999999999999999999999999999 4678999999999999999999999532 1356999999999
Q ss_pred CCCCCC--CCccceEEEEeeccccCcccceEEEcc
Q 001987 607 DGPFDQ--ATSLGHAEINFLKHTSTELADMWVSLE 639 (985)
Q Consensus 607 d~~~~~--dd~lG~~~i~l~~l~~~~~~~~w~~L~ 639 (985)
|. +++ |++||++.|+|.++.... .+.|++|+
T Consensus 97 d~-~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 97 AR-VREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp --------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred Cc-CcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 98 676 999999999999987655 88999985
No 28
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=3.3e-18 Score=167.12 Aligned_cols=105 Identities=21% Similarity=0.377 Sum_probs=93.7
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCE--------------EEEeeeccCCCCCeEeEEEEEE-eec--CCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGK--------------TRTSSVQLQTCDPQWHDILEFD-AME--EPPS 597 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~--------------~~kT~~~~~tlnP~Wne~f~f~-v~~--~~~~ 597 (985)
.|.|.|+|++|+||+++|.+|.+||||++++++. +++|+++++|+||+|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 3589999999999999999999999999999752 5789999999999999999997 432 2467
Q ss_pred EEEEEEEecCCCCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 598 VLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 598 ~L~v~V~D~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
.|.|+|||+|. +++|++||++.|+|.++..+...+.|++|.+
T Consensus 97 ~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDR-FSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECS-SSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCC-CCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 99999999998 7999999999999999987778899999986
No 29
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=3e-17 Score=159.52 Aligned_cols=103 Identities=21% Similarity=0.288 Sum_probs=90.2
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-EEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN---G-KTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~---~-~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d~ 608 (985)
.+.|+|+|++|+ ++|.+|.+||||++++. + .+++|+++++|+||+|||+|.|.+... ....|.|+|||+|.
T Consensus 25 ~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~ 101 (138)
T 1wfm_A 25 KAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR 101 (138)
T ss_dssp TTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC
Confidence 468999999999 36789999999999993 2 368999999999999999999996433 24689999999998
Q ss_pred CCCCCCccceEEEEeeccccCcccceEEEcccc
Q 001987 609 PFDQATSLGHAEINFLKHTSTELADMWVSLEGK 641 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~ 641 (985)
+++|++||++.|+|.++..+...+.|++|.+.
T Consensus 102 -~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 102 -FSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp -SCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred -CCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 89999999999999999877788999999874
No 30
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.71 E-value=3e-17 Score=159.02 Aligned_cols=118 Identities=25% Similarity=0.507 Sum_probs=102.1
Q ss_pred CCcEEEEEEEEeecCC------CCCcEEEEEECCeEEeecCcc-CCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCC
Q 001987 2 VSTRLYVYVLQGQDLL------AKDSYVKVQIGKHKSKSRILK-NNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGL 74 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~------~~DPyv~v~l~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~ 74 (985)
..+.|+|+|++|++|+ .+||||+|++++++.+|++++ +++||.|||+|.|.+.. ....|.|+|||++ +
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~---~- 82 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKD---V- 82 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSS---S-
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECC---C-
Confidence 3578999999999999 589999999999999999998 89999999999999954 7789999999999 4
Q ss_pred CCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEecC
Q 001987 75 FGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNGKG 133 (985)
Q Consensus 75 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~~ 133 (985)
.++|++||++.++|.++.... .....||+|. +. ....|+|+|+++|.+..
T Consensus 83 -~~~d~~lG~~~i~l~~l~~~~--~~~~~w~~L~-~~-----~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 83 -GTEDDAVGEATIPLEPVFVEG--SIPPTAYNVV-KD-----EEYKGEIWVALSFKPSG 132 (136)
T ss_dssp -CTTTCCSEEEEEESHHHHHHS--EEEEEEEEEE-ET-----TEEEEEEEEEEEEEECC
T ss_pred -CCCCceEEEEEEEHHHhccCC--CCCcEEEEee-cC-----CccCEEEEEEEEEEeCC
Confidence 578999999999999995432 2356899998 21 45789999999999864
No 31
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.71 E-value=2e-17 Score=160.41 Aligned_cols=104 Identities=25% Similarity=0.414 Sum_probs=93.7
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCCeEeEEEEEEeec-CCCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME-EPPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~~~~~tlnP~Wne~f~f~v~~-~~~~~L~v~V~D~d~ 608 (985)
.+.|.|+|++|++|+..|.+|.+||||++++ +..+++|+++++++||+|||+|.|.+.. .....|.|+|||+|.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 4689999999999999999999999999999 5678999999999999999999999643 234589999999998
Q ss_pred CCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 609 PFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
+++|++||++.|+|.++..+. .+.|++|.+
T Consensus 95 -~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 95 -TTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp -SSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred -CCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 789999999999999987655 789999986
No 32
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=1.1e-17 Score=163.05 Aligned_cols=106 Identities=19% Similarity=0.355 Sum_probs=93.2
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCCeEeEEEEEEeec---CCCCEEEEEEEec
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVFDF 606 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~~~~~tlnP~Wne~f~f~v~~---~~~~~L~v~V~D~ 606 (985)
.+.|.|+|++|+||+.+|.+|.+||||++++ +.++++|+++++|+||+|||+|.|.+.. .....|.|+|||+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 4689999999999999999999999999999 4678999999999999999999999432 2357999999999
Q ss_pred CCCCCC--CCccceEEEEeeccccCcccceEEEccccc
Q 001987 607 DGPFDQ--ATSLGHAEINFLKHTSTELADMWVSLEGKL 642 (985)
Q Consensus 607 d~~~~~--dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 642 (985)
|. +++ |++||++.|+|.++.... .+.|++|.+..
T Consensus 100 d~-~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 100 AR-VREEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp CS-SSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred CC-CcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 98 776 999999999999986654 78999998743
No 33
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=2.4e-17 Score=162.46 Aligned_cols=104 Identities=24% Similarity=0.400 Sum_probs=92.9
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CEEEEeeeccCCCCCeEeEEEEEEeecC-CCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN-----GKTRTSSVQLQTCDPQWHDILEFDAMEE-PPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~-----~~~~kT~~~~~tlnP~Wne~f~f~v~~~-~~~~L~v~V~D~d~ 608 (985)
.+.|+|+|++|+||++.|..|.+||||++++. ..+++|+++++++||+|||+|.|.+... ....|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 35899999999999999999999999999996 4689999999999999999999996432 34689999999998
Q ss_pred CCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 609 PFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
+++|++||++.|+|.++..+ ..+.|++|.+
T Consensus 110 -~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 -TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp -SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred -CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 78999999999999998765 4788999986
No 34
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.71 E-value=2.4e-17 Score=166.34 Aligned_cols=106 Identities=22% Similarity=0.295 Sum_probs=93.9
Q ss_pred CeEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----EEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEE-ecC
Q 001987 535 GWVLTVALVEGVNLASSEM-TGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVF-DFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~-~g~~DPyv~v~~~~-----~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~-D~d 607 (985)
.+.|.|+|++|+||+++|. +|.+||||++++.. .+++|+++++|+||+|||+|.|.+ ......|.|+|| |+|
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v-~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDE-SPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSS-CCTTEEEEEEEEEECS
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEe-cCCCCEEEEEEEEcCC
Confidence 4689999999999999995 79999999999853 378999999999999999999995 455679999999 999
Q ss_pred CCCCCCCccceEEEEeeccccCcccceEEEccccc
Q 001987 608 GPFDQATSLGHAEINFLKHTSTELADMWVSLEGKL 642 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 642 (985)
. +++|++||++.|+|.++..+...+.|++|.+..
T Consensus 108 ~-~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 108 R-MDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp T-TCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred C-CCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 8 799999999999999998888889999998743
No 35
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=8.5e-17 Score=153.63 Aligned_cols=111 Identities=23% Similarity=0.377 Sum_probs=94.3
Q ss_pred CCcEEEEEEEEeecCC---------CCCcEEEEEECC---eEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecC
Q 001987 2 VSTRLYVYVLQGQDLL---------AKDSYVKVQIGK---HKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHN 69 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~---------~~DPyv~v~l~~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d 69 (985)
+++.|.|+|++|+||+ .+||||++++++ .++||+++++++||.|||+|.|.+..+....|.|+|||+|
T Consensus 1 S~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 1 SSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CCEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CCcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 4689999999999998 479999999985 6799999999999999999999996667889999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEE
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISL 129 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~ 129 (985)
. . ++++||++.++|.++..+ .....|++|. ....|+|+|+++.
T Consensus 81 ---~--~-~~~~iG~~~i~l~~l~~~---~~~~~~~~L~--------~~~~g~i~~~le~ 123 (126)
T 1rlw_A 81 ---Y--V-MDETLGTATFTVSSMKVG---EKKEVPFIFN--------QVTEMVLEMSLEV 123 (126)
T ss_dssp ---S--S-CCEEEEEEEEEGGGSCTT---CEEEEEEEET--------TTEEEEEEEEEEC
T ss_pred ---C--C-CCceeEEEEEEHHHccCC---CcEEEEEEcC--------CCceEEEEEEEEe
Confidence 4 3 589999999999999754 3457899998 2345777777654
No 36
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=2.7e-17 Score=160.70 Aligned_cols=105 Identities=22% Similarity=0.385 Sum_probs=94.3
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCCCCCeEeEEEEEE-eecCC--CCEEEEEEEec
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFD-AMEEP--PSVLDVEVFDF 606 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~~~~~tlnP~Wne~f~f~-v~~~~--~~~L~v~V~D~ 606 (985)
.+.|.|+|++|++|++.|.+|.+||||++++++ .+++|+++++++||+|||+|.|. +.... ...|.|+|||+
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 107 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDE 107 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEEC
Confidence 458999999999999999999999999999974 78999999999999999999998 42211 36899999999
Q ss_pred CCCCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 607 DGPFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 607 d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
|. +++|++||++.|+|.++..+.....|++|+.
T Consensus 108 d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 108 DK-FGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp CT-TSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CC-CCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 98 7899999999999999998888999999974
No 37
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=3.3e-17 Score=160.08 Aligned_cols=107 Identities=23% Similarity=0.279 Sum_probs=92.5
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN-----GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~-----~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d 607 (985)
.+.|.|+|++|+||+++|.+| +||||++++. ..+++|+++++|+||+|||+|.|.+... ....|.|+|||+|
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 101 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG 101 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC
Confidence 458999999999999999999 9999999993 2688999999999999999999996322 2458999999999
Q ss_pred CCCCC--CCccceEEEEeeccccCcccceEEEcccccc
Q 001987 608 GPFDQ--ATSLGHAEINFLKHTSTELADMWVSLEGKLA 643 (985)
Q Consensus 608 ~~~~~--dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~ 643 (985)
. +++ +++||++.|+|..+..+...+.|++|.+..+
T Consensus 102 ~-~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 102 G-FLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp C-SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred C-ccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 7 653 5799999999999887778889999997544
No 38
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=9.1e-17 Score=162.03 Aligned_cols=120 Identities=17% Similarity=0.249 Sum_probs=101.3
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECCeEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCCCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGKHKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGLFG 76 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~~~ 76 (985)
.++|+|+|++|++|+ .+||||+|+++++++||+++++|+||+|||+|.|.+. ....|.|+|||+| + .
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d---~--~ 107 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQ---T--L 107 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECC---S--S
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEEEECC---C--C
Confidence 468999999999998 6899999999999999999999999999999999983 4889999999999 4 5
Q ss_pred CCCCeeEEEEEeCccccccCCCCC--CCeEEEeecCCCCCCCCccccEEEEEEEEEec
Q 001987 77 SSGELMGRVRVPVSSIAAEDNHML--PPTWFSLETPKTRKFTNKDCGKILLTISLNGK 132 (985)
Q Consensus 77 ~~d~~lG~~~i~L~~l~~~~~~~~--~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~ 132 (985)
++++|||++.++|.++........ ...|++|... .+ .....|+|.|.+.|.+.
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-~~--~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-KE--PTETIGDLSICLDGLQL 162 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-SC--TTSEEEEEEEEEESEEC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-CC--CCcccEEEEEEEeeeec
Confidence 789999999999999876533222 2579999844 22 24578999999999754
No 39
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=1.1e-16 Score=155.54 Aligned_cols=105 Identities=20% Similarity=0.231 Sum_probs=91.1
Q ss_pred CeEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CEEEEeeeccCCCCCeEeEEEEEE-eecC--CCCEEEEEEEecC
Q 001987 535 GWVLTVALVEGVNLASSEMT-GLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFD-AMEE--PPSVLDVEVFDFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~-g~~DPyv~v~~~---~~~~kT~~~~~tlnP~Wne~f~f~-v~~~--~~~~L~v~V~D~d 607 (985)
.+.|.|+|++|+||+++|.+ |.+||||++++. .++++|+++++++||+|||+|.|. +... ....|.|+|||+|
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d 100 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFD 100 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECC
Confidence 45899999999999999985 999999999995 478999999999999999999996 4322 2469999999999
Q ss_pred CCCCCCCccceEEEEeeccccCcc-cceEEEccc
Q 001987 608 GPFDQATSLGHAEINFLKHTSTEL-ADMWVSLEG 640 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l~~~~~-~~~w~~L~~ 640 (985)
. +++|++||++.|+|.++..+.. ...|++|..
T Consensus 101 ~-~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 101 R-FSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp S-SCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred C-CCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 8 7999999999999999877543 466899986
No 40
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.69 E-value=7.2e-17 Score=159.78 Aligned_cols=106 Identities=22% Similarity=0.344 Sum_probs=92.3
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCCeEeEEEEEEee-cCCCCEEEEEEEecC
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAM-EEPPSVLDVEVFDFD 607 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~~~~~tlnP~Wne~f~f~v~-~~~~~~L~v~V~D~d 607 (985)
..+.|.|+|++|+||++.| +|.+||||++++ ..++++|+++++|+||+|||+|.|.+. ......|.|+|||+|
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 103 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA 103 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC
Confidence 3569999999999999999 799999999999 346799999999999999999999963 344467999999999
Q ss_pred CCCCC-CCccceEEEEeecccc-CcccceEEEcccc
Q 001987 608 GPFDQ-ATSLGHAEINFLKHTS-TELADMWVSLEGK 641 (985)
Q Consensus 608 ~~~~~-dd~lG~~~i~l~~l~~-~~~~~~w~~L~~~ 641 (985)
. +++ |++||++.|+|.++.. +.....|++|.+.
T Consensus 104 ~-~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 104 S-QSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp S-SGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred C-CCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 8 676 9999999999999874 6778899999873
No 41
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.69 E-value=3e-16 Score=151.23 Aligned_cols=117 Identities=19% Similarity=0.330 Sum_probs=94.6
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC--eEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK--HKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGL 74 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~--~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~ 74 (985)
..+|+|+|++|++|+ .+||||++++.+ +.++|+++++|+||.|||+|.|.+... ..|.|+|||+| .
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d---~- 77 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHK---K- 77 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGG---G-
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECC---C-
Confidence 468999999999998 689999999975 779999999999999999999998543 34999999999 4
Q ss_pred CCCC---CCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEE
Q 001987 75 FGSS---GELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISL 129 (985)
Q Consensus 75 ~~~~---d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~ 129 (985)
.++ |+|||++.+|+.++..... ....|++|.. +.+.......|+|.|++++
T Consensus 78 -~~~~~~d~~lG~~~i~l~~l~~~~~--~~~~~~~L~~-~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 78 -IHKKQGAGFLGCVRLLSNAISRLKD--TGYQRLDLCK-LNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp -TTSSTTTTEEEEEEECHHHHHHHTT--SCCEEEECBC-SSTTCCCCCCSEEEEEEEE
T ss_pred -CCCCCCCCceEEEEEeHHHhhcccc--cCcEEEeeee-cCCCCCCceeEEEEEEEEc
Confidence 444 8999999999998843321 2468999984 4322224679999999875
No 42
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=3.1e-17 Score=161.22 Aligned_cols=108 Identities=20% Similarity=0.293 Sum_probs=92.9
Q ss_pred CeEEEEEEEEeecCCCC-CCC------CCCCcEEEEEEC---CEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEE
Q 001987 535 GWVLTVALVEGVNLASS-EMT------GLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVE 602 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~-d~~------g~~DPyv~v~~~---~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~ 602 (985)
.+.|.|+|++|+||+.+ |.+ |.+||||++++. .++++|+++++++||+|||+|.|.+... ....|.|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~ 104 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLT 104 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEE
Confidence 46899999999999984 443 589999999996 4688999999999999999999996432 24589999
Q ss_pred EEecCCCCCCCCccceEEEEeeccccCcccceEEEcccccc
Q 001987 603 VFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLA 643 (985)
Q Consensus 603 V~D~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~ 643 (985)
|||+|. +++|++||++.|+|.++........|++|.++..
T Consensus 105 V~d~d~-~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 144 (147)
T 2enp_A 105 VVDFDK-FSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSGP 144 (147)
T ss_dssp EECCST-TCCSCCCEEEEEETTTSCTTTCCCEEECCBCCCC
T ss_pred EEECCC-CcCCcEEEEEEEechhcCCCCCccEEEEeecCCC
Confidence 999998 7999999999999999987777789999997543
No 43
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=1.6e-16 Score=159.64 Aligned_cols=91 Identities=21% Similarity=0.382 Sum_probs=82.4
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d 607 (985)
.+.|.|+|++|+||+.+|.+|.+||||++++++ .+++|+++++|+||+|||+|.|.+... ....|.|+|||+|
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 468999999999999999999999999999975 689999999999999999999996432 2569999999999
Q ss_pred CCCCCCCccceEEEEeecc
Q 001987 608 GPFDQATSLGHAEINFLKH 626 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l 626 (985)
. +++|++||++.|+|..+
T Consensus 116 ~-~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 116 I-GKSNDYIGGCQLGISAK 133 (166)
T ss_dssp S-SSCCEEEEEEEEETTCC
T ss_pred C-CCCCcEEEeEEEecccC
Confidence 8 78999999999999875
No 44
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.67 E-value=2e-16 Score=157.64 Aligned_cols=105 Identities=25% Similarity=0.451 Sum_probs=90.1
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---EEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN--G---KTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~--~---~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d 607 (985)
.+.|.|+|++|+||+..|.+|.+||||+++++ + .+++|+++++++||+|||+|.|.+... ....|.|+|||+|
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 46899999999999999999999999999995 2 478999999999999999999996432 2458999999999
Q ss_pred CCCCCCCccceEEEEeecc------------ccCcccceEEEccc
Q 001987 608 GPFDQATSLGHAEINFLKH------------TSTELADMWVSLEG 640 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l------------~~~~~~~~w~~L~~ 640 (985)
. +++|++||++.|++..+ ..+.....|++|.+
T Consensus 104 ~-~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 104 K-IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp S-SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred C-CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 8 79999999999999853 23345678999976
No 45
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=2e-16 Score=153.49 Aligned_cols=102 Identities=18% Similarity=0.337 Sum_probs=85.9
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----EEEEeeeccCCCCCeEeEEEEEEeecCC--CCEEEEEEEecC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~~~~~tlnP~Wne~f~f~v~~~~--~~~L~v~V~D~d 607 (985)
.+.|.|+|++|+||+..|.+|.+||||++++++ .+++|+++++++||+|||+|.|.+.... ...|.|+|||+|
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 468999999999999999999999999999963 5789999999999999999999964332 358999999999
Q ss_pred CCCCCCCccceEEEEeeccccCcccceEEEcc
Q 001987 608 GPFDQATSLGHAEINFLKHTSTELADMWVSLE 639 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~ 639 (985)
. +++|++||++.|+|.++. .....|++|.
T Consensus 95 ~-~~~~~~lG~~~i~l~~~~--~~~~~W~~l~ 123 (138)
T 3n5a_A 95 K-LSRNDVIGKIYLSWKSGP--GEVKHWKDMI 123 (138)
T ss_dssp S-SSCCEEEEEEEESSSSCH--HHHHHHHHHH
T ss_pred C-CCCCcEEEEEEEccccCC--hHHHHHHHHH
Confidence 8 789999999999998743 2234455554
No 46
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=6.7e-16 Score=169.10 Aligned_cols=123 Identities=20% Similarity=0.335 Sum_probs=106.5
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDGP 609 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~---~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d~~ 609 (985)
.+.|+|+|++|+||+++|.+|.+||||+++++ ++.++|+++++++||+|||+|.|.+... ....|.|+|||+|.
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~- 96 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR- 96 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS-
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC-
Confidence 46899999999999999999999999999995 4588999999999999999999996432 35799999999998
Q ss_pred CCCCCccceEEEEeeccccCcccceEEEcccccc--CCcceeEEEEEeeec
Q 001987 610 FDQATSLGHAEINFLKHTSTELADMWVSLEGKLA--QSAQSKVHLRIFLEN 658 (985)
Q Consensus 610 ~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~--~~~~g~l~l~~~ls~ 658 (985)
+++|++||++.|+|.++..+...+.|++|.+..+ ....|.|++.+.+..
T Consensus 97 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred CCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecC
Confidence 7899999999999999988888899999987432 345688888876643
No 47
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.64 E-value=7.3e-16 Score=148.87 Aligned_cols=98 Identities=23% Similarity=0.476 Sum_probs=86.1
Q ss_pred CcEEEEEEEEeecCC-----CCCcEEEEEEC-----CeEEeecCccCCCCCeEeeEEEEE-Ee--cCCCceEEEEEEecC
Q 001987 3 STRLYVYVLQGQDLL-----AKDSYVKVQIG-----KHKSKSRILKNNSNPVWNEEFVFR-VH--NIDDEELVVSVFQHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-----~~DPyv~v~l~-----~~~~kT~v~~~t~nP~wnE~f~f~-v~--~~~~~~L~~~V~D~d 69 (985)
.+.|.|+|++|+||+ .+||||+|++. ..++||+++++|+||.|||+|.|. ++ +.....|.|+|||+|
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 578999999999998 68999999993 456899999999999999999999 75 336789999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++..+ .....||+|.
T Consensus 99 ---~--~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~ 129 (134)
T 2b3r_A 99 ---S--LRENFFLGGITLPLKDFNLS---KETVKWYQLT 129 (134)
T ss_dssp ---S--SSCCEEEEEEEEEGGGSCTT---SCEEEEEECB
T ss_pred ---C--CCCCcEEEEEEEEhhhccCC---CCcceeEECC
Confidence 4 57899999999999999764 2467899998
No 48
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.64 E-value=1.7e-16 Score=157.08 Aligned_cols=103 Identities=21% Similarity=0.320 Sum_probs=81.7
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE---EEEeeeccCCCCCeEeEEEEEEeecCC--CCEEEEEEEecC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGK---TRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDFD 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~--~~~---~~kT~~~~~tlnP~Wne~f~f~v~~~~--~~~L~v~V~D~d 607 (985)
.+.|.|+|++|+||+..|.+|.+||||++++ ++. +++|+++++++||+|||+|.|.+.... ...|.|+|||+|
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 4689999999999999999999999999999 443 679999999999999999999964332 368999999999
Q ss_pred CCCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 608 GPFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
. +++|++||++.|+|.+ .+...+.|++|..
T Consensus 109 ~-~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 109 R-GSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp T-TSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred C-CCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 8 7899999999999988 3344556666654
No 49
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.63 E-value=1e-15 Score=182.01 Aligned_cols=119 Identities=24% Similarity=0.305 Sum_probs=106.3
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCCCC
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 613 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~~d 613 (985)
..|.|+|+|++|++|+++|.+|.+||||++++++++++|+++++|+||+|||+|.|.+.......|.|+|||+|. +++|
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-~~~~ 463 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-FSPD 463 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS-SSSC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC-CCCC
Confidence 357999999999999999999999999999999999999999999999999999999766666789999999998 7999
Q ss_pred CccceEEEEeeccccCcc----cceEEEccccccCCcceeEEEEEeee
Q 001987 614 TSLGHAEINFLKHTSTEL----ADMWVSLEGKLAQSAQSKVHLRIFLE 657 (985)
Q Consensus 614 d~lG~~~i~l~~l~~~~~----~~~w~~L~~~~~~~~~g~l~l~~~ls 657 (985)
|+||++.++|.++..+.. ...|++|.+. ..|.|+|++.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~----~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV----PTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS----SSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCCceeeeecCCCC----CCceEEEEEEEE
Confidence 999999999999876543 6789999863 568888888764
No 50
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.62 E-value=3.8e-15 Score=140.87 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=103.4
Q ss_pred CCcEEEEEEEEeecCC-CCCcEEEEEECCeEEeecCcc-CCCCCeEeeEEEEEEe--cCCCceEEEEEEecCCCCCCCCC
Q 001987 2 VSTRLYVYVLQGQDLL-AKDSYVKVQIGKHKSKSRILK-NNSNPVWNEEFVFRVH--NIDDEELVVSVFQHNDDSGLFGS 77 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~-~~DPyv~v~l~~~~~kT~v~~-~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~~~~~~~~ 77 (985)
.+|.|+|+|.+|.||+ ++||||++.+.+.+++|++++ +++||+|||.|.|++. ......|.|.|||++ + ++
T Consensus 19 ~~msL~V~l~~a~~Lpg~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~---~--v~ 93 (144)
T 3l9b_A 19 SHMALIVHLKTVSELRGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS---K--VF 93 (144)
T ss_dssp CCEEEEEEEEEEESCCSCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC---T--TS
T ss_pred CcEEEEEEEEEecCCCCCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc---c--cc
Confidence 4689999999999999 999999999999999999998 6999999999999986 567789999999999 6 67
Q ss_pred CCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEecCC
Q 001987 78 SGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNGKGH 134 (985)
Q Consensus 78 ~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~~~~ 134 (985)
++++||++.++|.++...+. ...+-+|.+... ....++|++.++|.+..+
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~---l~l~~~LvD~n~----~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENR---VEVSDTLIDDNN----AIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSE---EEEEEEEECTTS----CEEEEEEEEEEEEEETTC
T ss_pred CCCEEEEEEEEhHHhccCCe---EEEeecccCCCC----CccccEEEEEEEecCCCC
Confidence 99999999999999998742 234567773332 234589999999998754
No 51
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.61 E-value=1.9e-15 Score=177.45 Aligned_cols=113 Identities=19% Similarity=0.239 Sum_probs=98.4
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeeccCCCCCeEeEEEEEEeec-CCCCEEEEEEEecCCCCCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAME-EPPSVLDVEVFDFDGPFDQA 613 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~~tlnP~Wne~f~f~v~~-~~~~~L~v~V~D~d~~~~~d 613 (985)
.|.|+|+|++|+||+. |.+|++||||+|++++++++|+++++++||+|||+|.|.+.. .....|+|+|||+|. +++|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~-~~~d 470 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY-GWDD 470 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS-SSCC
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC-CCCC
Confidence 4799999999999999 999999999999999999999999999999999999998643 467799999999998 7899
Q ss_pred CccceEEEEeeccccCcccceEEEccccccCCcceeEEEEEeeecCC
Q 001987 614 TSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRIFLENNN 660 (985)
Q Consensus 614 d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~g~l~l~~~ls~~~ 660 (985)
|+||++.++|.. +..+.|++|. .|.|++++.+...+
T Consensus 471 D~LG~~~~~L~~----g~~~~~~~l~-------~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 471 DLLGSCDRSPHS----GFHEVTCELN-------HGRVKFSYHAKCLP 506 (540)
T ss_dssp EEEEEEEECCCS----EEEEEEEECS-------SSEEEEEEEEEECT
T ss_pred CEEEEEEEEeeC----CcEEEEEEcC-------CeEEEEEEEEEECC
Confidence 999999999883 3467899976 36788887654443
No 52
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=4.3e-15 Score=142.67 Aligned_cols=98 Identities=24% Similarity=0.410 Sum_probs=78.3
Q ss_pred CCCcEEEEEEEEeecCC---CCCcEEEEEECCeEEeecCcc-CCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCCCC
Q 001987 1 MVSTRLYVYVLQGQDLL---AKDSYVKVQIGKHKSKSRILK-NNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGLFG 76 (985)
Q Consensus 1 ~~~~~L~V~V~~Ar~L~---~~DPyv~v~l~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~~~ 76 (985)
|+.+.|.|+|++|++|+ .+||||+|+ . +..+|++++ +++||.|||+|.|.+. .....|.|+|||+| .
T Consensus 2 ~~~~~L~V~V~~A~~l~~~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~-~~~~~L~~~V~D~d------~ 72 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGAQEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEIN-RLDLGLTVEVWNKG------L 72 (131)
T ss_dssp CCCEEEEEEEEEEECSSCGGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEEC-CCSSEEEEEEEECC------S
T ss_pred CcceEEEEEEEEeECCCCCCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEe-CCCCeEEEEEEECC------C
Confidence 78899999999999987 789999999 3 334555554 6999999999999995 45567999999999 4
Q ss_pred CCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 77 SSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 77 ~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
++|++||++.+||.++..... .....|.++.
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~~-~~~~~~~~~~ 103 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSNE-EGPGEWLTLD 103 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCSS-CCCCEEEECB
T ss_pred CCCCeEEEEEEEHHHhhhcCC-CCccccEEcc
Confidence 689999999999999875531 1123566654
No 53
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.61 E-value=8.5e-16 Score=152.07 Aligned_cols=99 Identities=16% Similarity=0.320 Sum_probs=85.3
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC---e---EEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEec
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK---H---KSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQH 68 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~---~---~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~ 68 (985)
.+.|+|+|++|+||+ .+||||++++.+ . ++||+++++|+||+|||+|.|.++ +.....|.|+|||+
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~ 121 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTT 121 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEEC
Confidence 478999999999998 689999999975 2 699999999999999999999985 23467899999999
Q ss_pred CCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 69 NDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 69 d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
| + .+++++||++.++|.++.... .....||+|.
T Consensus 122 d---~--~~~~d~iG~~~i~l~~l~~~~--~~~~~W~~L~ 154 (155)
T 2z0u_A 122 D---R--SHLEECLGGAQISLAEVCRSG--ERSTRWYNLL 154 (155)
T ss_dssp C---T--TSCEEEEEEEEEECTTSCTTC--CCEEEEEEEB
T ss_pred C---C--CCCCcEEEEEEEEHHHccCCC--CccccceEcc
Confidence 9 5 579999999999999996321 2457899986
No 54
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.60 E-value=3.1e-15 Score=164.77 Aligned_cols=124 Identities=19% Similarity=0.370 Sum_probs=102.1
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecCC
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC---NGKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDG 608 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d~ 608 (985)
..+.|.|+|++|++|+++|.+|.+||||++++ +.+.++|+++++++||+|||+|.|.+... ....|.|+|||+|.
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 35689999999999999999999999999999 56789999999999999999999996433 24589999999998
Q ss_pred CCCCCCccceEEEE-eecccc-CcccceEEEccccc-cCCcceeEEEEEeeec
Q 001987 609 PFDQATSLGHAEIN-FLKHTS-TELADMWVSLEGKL-AQSAQSKVHLRIFLEN 658 (985)
Q Consensus 609 ~~~~dd~lG~~~i~-l~~l~~-~~~~~~w~~L~~~~-~~~~~g~l~l~~~ls~ 658 (985)
+++|++||++.|+ +..+.. ......|++|.... .....|.|++.+.+..
T Consensus 98 -~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 98 -FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp -SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred -CCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecc
Confidence 8999999999996 444433 34567899998643 3345688988887644
No 55
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.60 E-value=3.4e-15 Score=145.89 Aligned_cols=98 Identities=29% Similarity=0.576 Sum_probs=86.1
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC---CeEEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecCCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG---KHKSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHNDD 71 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~---~~~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~~ 71 (985)
.+.|.|+|++|+||+ .+||||++++. ..+++|+++++|+||.|||+|.|.++ +.....|.|+|||+|
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d-- 110 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD-- 110 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC--
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC--
Confidence 578999999999999 68999999994 45799999999999999999999986 345689999999999
Q ss_pred CCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 72 SGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 72 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++..+ .....||+|+
T Consensus 111 -~--~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~ 141 (143)
T 3f04_A 111 -R--FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQ 141 (143)
T ss_dssp -S--SSCCEEEEEEEEEGGGCCTT---SCEEEEEECB
T ss_pred -C--CCCCceEEEEEEEHHHccCC---CCcceEEECc
Confidence 4 57899999999999999765 2467899998
No 56
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.60 E-value=4.9e-15 Score=143.83 Aligned_cols=99 Identities=17% Similarity=0.324 Sum_probs=85.0
Q ss_pred CcEEEEEEEEeecCC---CCCcEEEEEECC----eEEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecCCCCC
Q 001987 3 STRLYVYVLQGQDLL---AKDSYVKVQIGK----HKSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHNDDSG 73 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~---~~DPyv~v~l~~----~~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~~~~ 73 (985)
.+.|+|+|++|++.. .+||||+|++.+ .+++|+++++|+||+|||+|.|.++ +.....|.|+|||+| +
T Consensus 25 ~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d---~ 101 (138)
T 1wfm_A 25 KAELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD---R 101 (138)
T ss_dssp TTEEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC---S
T ss_pred CCEEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC---C
Confidence 578999999999755 799999999952 3589999999999999999999985 234679999999999 5
Q ss_pred CCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeec
Q 001987 74 LFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLET 109 (985)
Q Consensus 74 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~ 109 (985)
.+++++||++.++|.++... .....|++|.+
T Consensus 102 --~~~dd~lG~~~i~l~~l~~~---~~~~~W~~L~~ 132 (138)
T 1wfm_A 102 --FSRHSVAGELRLGLDGTSVP---LGAAQWGELKT 132 (138)
T ss_dssp --SCTTSCSEEEEEESSSSSSC---TTCCEEEECCC
T ss_pred --CCCCcEEEEEEEEcccccCc---ccccceeeCcC
Confidence 57999999999999999754 24678999983
No 57
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.59 E-value=4.2e-15 Score=146.87 Aligned_cols=98 Identities=29% Similarity=0.576 Sum_probs=85.7
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC---CeEEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecCCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG---KHKSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHNDD 71 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~---~~~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~~ 71 (985)
.+.|.|+|++|+||+ .+||||+|++. ..+++|+++++|+||.|||+|.|.+. +.....|.|+|||+|
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d-- 118 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD-- 118 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC--
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECC--
Confidence 578999999999998 58999999995 45799999999999999999999985 235789999999999
Q ss_pred CCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 72 SGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 72 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++..+ .....||+|.
T Consensus 119 -~--~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~ 149 (152)
T 1rsy_A 119 -R--FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQ 149 (152)
T ss_dssp -S--SSCCEEEEEEEEEGGGCCCS---SCEEEEEECB
T ss_pred -C--CCCCcEEEEEEEEchhccCC---CCcceEEECC
Confidence 4 57899999999999999754 2467899998
No 58
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.59 E-value=1.7e-15 Score=148.99 Aligned_cols=101 Identities=21% Similarity=0.351 Sum_probs=86.1
Q ss_pred CcEEEEEEEEeecCC-------CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEEEec--CCCceEEEEEEec
Q 001987 3 STRLYVYVLQGQDLL-------AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFRVHN--IDDEELVVSVFQH 68 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-------~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~v~~--~~~~~L~~~V~D~ 68 (985)
.+.|.|+|++|+||+ .+||||++++.+ .+++|+++++|+||.|||+|.|.++. .....|.|+|||+
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 578999999999998 489999999972 47999999999999999999999852 2456899999999
Q ss_pred CCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCC
Q 001987 69 NDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKT 112 (985)
Q Consensus 69 d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~ 112 (985)
| + .+++++||++.++|.++.... ....||+|. ++.
T Consensus 102 d---~--~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~-~~~ 136 (148)
T 3fdw_A 102 G---R--FGRNTFLGEAEIQMDSWKLDK---KLDHCLPLH-GKI 136 (148)
T ss_dssp C---G--GGCEEEEEEEEEEHHHHHHHC---CSEEEEECB-CC-
T ss_pred C---C--CcCCcEEEEEEEEcccccccC---CccceEECc-Ccc
Confidence 9 4 578999999999999998663 367999999 443
No 59
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.59 E-value=4e-15 Score=142.54 Aligned_cols=97 Identities=24% Similarity=0.612 Sum_probs=80.6
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEE-----CCeEEeecCccCCCCCeEeeEEEEEE-e--cCCCceEEEEEEec
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQI-----GKHKSKSRILKNNSNPVWNEEFVFRV-H--NIDDEELVVSVFQH 68 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l-----~~~~~kT~v~~~t~nP~wnE~f~f~v-~--~~~~~~L~~~V~D~ 68 (985)
.+.|.|+|++|+||+ .+||||++++ ...+++|+++++|+||.|||+|.|.+ + +.....|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 478999999999999 5899999999 34679999999999999999999994 3 33568999999999
Q ss_pred CCCCCCCCCC--CCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 69 NDDSGLFGSS--GELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 69 d~~~~~~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
| + .++ +++||++.++|.++...+ ...||+|+
T Consensus 97 d---~--~~~~~~~~lG~~~i~l~~l~~~~----~~~W~~Lq 129 (129)
T 2bwq_A 97 A---R--VREEESEFLGEILIELETALLDD----EPHWYKLQ 129 (129)
T ss_dssp ------------CEEEEEEEEEGGGCCCSS----CEEEEECC
T ss_pred C---c--CcCcCCceeEEEEEEccccCCCc----CCccEECc
Confidence 9 4 455 999999999999987642 67899985
No 60
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.58 E-value=7.8e-15 Score=138.74 Aligned_cols=119 Identities=14% Similarity=0.209 Sum_probs=105.8
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCCeEeEEEEEEeec--CCCCEEEEEEEecCCCCCCC
Q 001987 537 VLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAME--EPPSVLDVEVFDFDGPFDQA 613 (985)
Q Consensus 537 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~-~tlnP~Wne~f~f~v~~--~~~~~L~v~V~D~d~~~~~d 613 (985)
-|+|.|.+|.+|+ |++|||+++.+.+.+++|++++ +++||+|||.|+|++.. +....|.|.|||+++ +++|
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~-v~~n 95 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK-VFSN 95 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-TSCC
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-ccCC
Confidence 6899999999998 5899999999999999999998 69999999999999743 345699999999999 8999
Q ss_pred CccceEEEEeeccccCcccceEEEccccccCCcceeEEEEEeeecCCC
Q 001987 614 TSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRIFLENNNG 661 (985)
Q Consensus 614 d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~g~l~l~~~ls~~~~ 661 (985)
.+||++.|+|.++..++....+.+|.+...++..+.|.+.+.|..+.+
T Consensus 96 rlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp EEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETTC
T ss_pred CEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCCC
Confidence 999999999999888777778889988777777789999998877654
No 61
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=1.7e-15 Score=149.06 Aligned_cols=98 Identities=29% Similarity=0.522 Sum_probs=85.2
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC-----CeEEeecCccCCCCCeEeeEEEEEEecC-CCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG-----KHKSKSRILKNNSNPVWNEEFVFRVHNI-DDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~-----~~~~kT~v~~~t~nP~wnE~f~f~v~~~-~~~~L~~~V~D~d~ 70 (985)
.+.|.|+|++|+||+ .+||||+|++. ..+++|+++++++||.|||+|.|.+... ....|.|+|||+|
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d- 108 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD- 108 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC-
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC-
Confidence 578999999999998 68999999997 3579999999999999999999998532 3468999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeec
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLET 109 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~ 109 (985)
. .+++++||++.++|.++... ....||+|..
T Consensus 109 --~--~~~~~~iG~~~i~l~~l~~~----~~~~W~~L~~ 139 (149)
T 1a25_A 109 --L--TSRNDFMGSLSFGISELQKA----GVDGWFKLLS 139 (149)
T ss_dssp --S--SSCCEEEEEEEEEHHHHTTC----CEEEEEECBC
T ss_pred --C--CCCCCEEEEEEEEHHHhCcC----ccCCeEEccC
Confidence 4 57899999999999999754 3678999983
No 62
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=2e-15 Score=147.31 Aligned_cols=98 Identities=27% Similarity=0.545 Sum_probs=85.4
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECCe--------------EEeecCccCCCCCeEeeEEEEE-Ee--cCCCc
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGKH--------------KSKSRILKNNSNPVWNEEFVFR-VH--NIDDE 59 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~~--------------~~kT~v~~~t~nP~wnE~f~f~-v~--~~~~~ 59 (985)
.+.|.|+|++|+||+ .+||||+|++.+. +++|+++++|+||.|||+|.|. ++ +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 468999999999999 6899999999863 4899999999999999999997 64 33678
Q ss_pred eEEEEEEecCCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 60 ELVVSVFQHNDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 60 ~L~~~V~D~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
.|.|+|||+| + .+++++||++.++|.++.... ....||+|.
T Consensus 97 ~l~i~V~d~d---~--~~~~~~lG~~~i~l~~l~~~~---~~~~W~~L~ 137 (142)
T 1rh8_A 97 TLEVTVWDYD---R--FSSNDFLGEVLIDLSSTSHLD---NTPRWYPLK 137 (142)
T ss_dssp EEEEEEEEEC---S--SSCEEEEEEEEEETTSCGGGT---TCCEEEECB
T ss_pred EEEEEEEECC---C--CCCCceEEEEEEeccccccCC---CCCeEEECC
Confidence 9999999999 4 578999999999999987642 467999998
No 63
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=6.9e-15 Score=147.12 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=90.8
Q ss_pred CCCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeecc-CCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCC
Q 001987 533 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFD 611 (985)
Q Consensus 533 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~~-~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~ 611 (985)
+..+.|+|+|++|++|+ .+|.+||||+++ .+.++|++++ +++||+|||+|.|.+. .....|.|+|||+| ++
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~-~~~~~L~~~V~D~d--~~ 82 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEIN-RLDLGLTVEVWNKG--LI 82 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECC-CTTSEEEEEEEECC--SS
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEee-CCCCEEEEEEEECC--CC
Confidence 34679999999999885 378999999999 3445676665 6999999999999954 55678999999999 47
Q ss_pred CCCccceEEEEeeccccCcc--cceEEEc----ccccc------CCcceeEEEEEeeecCCCc
Q 001987 612 QATSLGHAEINFLKHTSTEL--ADMWVSL----EGKLA------QSAQSKVHLRIFLENNNGV 662 (985)
Q Consensus 612 ~dd~lG~~~i~l~~l~~~~~--~~~w~~L----~~~~~------~~~~g~l~l~~~ls~~~~~ 662 (985)
+||+||++.|+|.++..... ...|.++ ..+.+ .+..+++++.+.+..+.+.
T Consensus 83 ~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~~~~ 145 (167)
T 2cjs_A 83 WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELPLDI 145 (167)
T ss_dssp CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCCCC
T ss_pred CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecCCCC
Confidence 89999999999999755331 1134433 21111 1234668888887776554
No 64
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.58 E-value=3.6e-15 Score=144.41 Aligned_cols=100 Identities=26% Similarity=0.561 Sum_probs=86.1
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEE-----CCeEEeecCccCCCCCeEeeEEEEEEec-CCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQI-----GKHKSKSRILKNNSNPVWNEEFVFRVHN-IDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l-----~~~~~kT~v~~~t~nP~wnE~f~f~v~~-~~~~~L~~~V~D~d~ 70 (985)
.+.|.|+|++|+||+ .+||||++++ ...+++|+++++++||.|||+|.|.+.. .....|.|+|||+|
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d- 93 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD- 93 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC-
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC-
Confidence 578999999999998 6899999999 4567999999999999999999999852 23468999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCC
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPK 111 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~ 111 (985)
. .+++++||++.++|.++... ....||+|.+..
T Consensus 94 --~--~~~~~~iG~~~i~l~~l~~~----~~~~W~~L~~~~ 126 (137)
T 3rdl_A 94 --R--TTRNDFMGSLSFGVSELMKM----PASGWYKLLNQE 126 (137)
T ss_dssp --S--SSCCEEEEEEEEEHHHHHHS----CEEEEEECBCHH
T ss_pred --C--CCCCceEEEEEEeHHHhccC----ccCceEECcCcc
Confidence 4 57899999999999999764 267899998443
No 65
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=1.6e-14 Score=138.77 Aligned_cols=97 Identities=18% Similarity=0.227 Sum_probs=77.3
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEEeeec-cCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCCCCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQ-LQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 613 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~~~-~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~~~~d 613 (985)
.+.|.|+|++|++|+. +|.+||||+++ .+..+|+++ .+++||+|||+|.|.+. .....|.|+|||+| +++|
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~-~~~~~L~~~V~D~d--~~~d 75 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEIN-RLDLGLTVEVWNKG--LIWD 75 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEEC-CCSSEEEEEEEECC--SSCE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEe-CCCCeEEEEEEECC--CCCC
Confidence 4699999999999853 78999999999 334455555 47999999999999954 55668999999999 4889
Q ss_pred CccceEEEEeeccccCc--ccceEEEcc
Q 001987 614 TSLGHAEINFLKHTSTE--LADMWVSLE 639 (985)
Q Consensus 614 d~lG~~~i~l~~l~~~~--~~~~w~~L~ 639 (985)
|+||++.|+|.++.... ....|.++.
T Consensus 76 d~iG~~~i~l~~l~~~~~~~~~~~~~~~ 103 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQSNEEGPGEWLTLD 103 (131)
T ss_dssp EEEEEEEEEGGGSCBCSSCCCCEEEECB
T ss_pred CeEEEEEEEHHHhhhcCCCCccccEEcc
Confidence 99999999999986543 122466554
No 66
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=7.6e-15 Score=143.01 Aligned_cols=98 Identities=27% Similarity=0.528 Sum_probs=85.3
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC---CeEEeecCccCCCCCeEeeEEEEEE-e--cCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG---KHKSKSRILKNNSNPVWNEEFVFRV-H--NIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~---~~~~kT~v~~~t~nP~wnE~f~f~v-~--~~~~~~L~~~V~D~d~ 70 (985)
.+.|+|+|++|+||+ .+||||+|++. ..++||+++++++||.|||+|.|.+ + ......|.|+|||+|
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d- 103 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD- 103 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC-
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC-
Confidence 568999999999999 58999999995 3579999999999999999999984 3 235689999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++..+. ....||+|.
T Consensus 104 --~--~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~ 134 (141)
T 2d8k_A 104 --R--FSRNDPIGEVSIPLNKVDLTQ---MQTFWKDLK 134 (141)
T ss_dssp --S--SSSCEEEEEEEEETTTSCTTS---CEEEEECCE
T ss_pred --C--CCCCcEEEEEEEEhhhhcCCC---CccEEEECc
Confidence 4 578999999999999998652 467899999
No 67
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.55 E-value=9.1e-15 Score=142.62 Aligned_cols=99 Identities=24% Similarity=0.472 Sum_probs=84.8
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEE-Ee--cCCCceEEEEEEec
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFR-VH--NIDDEELVVSVFQH 68 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~-v~--~~~~~~L~~~V~D~ 68 (985)
.+.|.|+|++|+||+ .+||||+|++.+ .++||+++++++||.|||+|.|. +. +.....|.|+|||+
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 107 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDE 107 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEEC
Confidence 468999999999998 589999999975 67999999999999999999998 64 22347999999999
Q ss_pred CCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeec
Q 001987 69 NDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLET 109 (985)
Q Consensus 69 d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~ 109 (985)
| + .+++++||++.++|.++..+. ....|++|.+
T Consensus 108 d---~--~~~d~~iG~~~i~l~~l~~~~---~~~~~~~L~~ 140 (142)
T 2chd_A 108 D---K--FGHNEFIGETRFSLKKLKANQ---RKNFNICLER 140 (142)
T ss_dssp C---T--TSCEEEEEEEEEEGGGCCTTC---CEEEEEECBC
T ss_pred C---C--CCCCcEEEEEEEEHHHcCCCC---ccEEEEeccc
Confidence 9 4 578999999999999998652 4567888873
No 68
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.55 E-value=1.4e-14 Score=143.29 Aligned_cols=103 Identities=24% Similarity=0.460 Sum_probs=84.9
Q ss_pred CCcEEEEEEEEeecCC-----CCCcEEEEEEC-----CeEEeecCccCCCCCeEeeEEEEEEe-cCCCceEEEEEEecCC
Q 001987 2 VSTRLYVYVLQGQDLL-----AKDSYVKVQIG-----KHKSKSRILKNNSNPVWNEEFVFRVH-NIDDEELVVSVFQHND 70 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~-----~~DPyv~v~l~-----~~~~kT~v~~~t~nP~wnE~f~f~v~-~~~~~~L~~~V~D~d~ 70 (985)
..+.|.|+|++|+||+ .+||||+|++. ..+++|+++++|+||.|||+|.|.+. ......|.|+|||+|
T Consensus 25 ~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d- 103 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA- 103 (153)
T ss_dssp SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC-
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC-
Confidence 3578999999999998 68999999994 34699999999999999999999985 233356999999999
Q ss_pred CCCCCCCC-CCeeEEEEEeCccccccCCCCCCCeEEEeecCC
Q 001987 71 DSGLFGSS-GELMGRVRVPVSSIAAEDNHMLPPTWFSLETPK 111 (985)
Q Consensus 71 ~~~~~~~~-d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~ 111 (985)
. .++ ++|||++.++|.++.... .....||+|.+..
T Consensus 104 --~--~~~~d~~lG~~~i~l~~l~~~~--~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 104 --S--QSRQSGLIGCMSFGVKSLLTPD--KEISGWYYLLGEH 139 (153)
T ss_dssp --S--SGGGCEEEEEEEEEHHHHTC----CCEEEEEECBCTT
T ss_pred --C--CCCCCcEEEEEEEEHHHhcCCC--CccccEEECCChh
Confidence 4 455 899999999999997421 3467899999443
No 69
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=2e-14 Score=139.47 Aligned_cols=99 Identities=23% Similarity=0.422 Sum_probs=83.9
Q ss_pred CcEEEEEEEEeecCC-------CCCcEEEEEECC---eEEeecCccCCCCCeEeeEEEEE-Ee--cCCCceEEEEEEecC
Q 001987 3 STRLYVYVLQGQDLL-------AKDSYVKVQIGK---HKSKSRILKNNSNPVWNEEFVFR-VH--NIDDEELVVSVFQHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-------~~DPyv~v~l~~---~~~kT~v~~~t~nP~wnE~f~f~-v~--~~~~~~L~~~V~D~d 69 (985)
.+.|.|+|++|+||+ .+||||+|++.+ ++++|+++++|+||+|||+|.|. ++ +.....|.|+|||+|
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d 100 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFD 100 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECC
Confidence 468999999999998 379999999963 67999999999999999999996 64 224579999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++..... ....|++|.
T Consensus 101 ---~--~~~~~~lG~~~i~l~~l~~~~~--~~~~~~~l~ 132 (138)
T 1ugk_A 101 ---R--FSRDDIIGEVLIPLSGIELSEG--KMLMNREII 132 (138)
T ss_dssp ---S--SCCCCCCEEEEEECTTCCCTTC--CEEEEEECB
T ss_pred ---C--CCCCcEEEEEEEehhHccCCCC--cchhhhhhh
Confidence 4 5789999999999999986532 235679998
No 70
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=5.8e-15 Score=143.72 Aligned_cols=100 Identities=25% Similarity=0.603 Sum_probs=85.0
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC-----CeEEeecCccCCCCCeEeeEEEEE-Ee--cCCCceEEEEEEec
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG-----KHKSKSRILKNNSNPVWNEEFVFR-VH--NIDDEELVVSVFQH 68 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~-----~~~~kT~v~~~t~nP~wnE~f~f~-v~--~~~~~~L~~~V~D~ 68 (985)
.+.|.|+|++|+||+ .+||||+|++. ..+++|+++++|+||+|||+|.|. ++ +.....|.|+|||+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 578999999999999 58999999993 467999999999999999999998 43 33568999999999
Q ss_pred CCCCCCCCCC--CCeeEEEEEeCccccccCCCCCCCeEEEeecCC
Q 001987 69 NDDSGLFGSS--GELMGRVRVPVSSIAAEDNHMLPPTWFSLETPK 111 (985)
Q Consensus 69 d~~~~~~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~ 111 (985)
| + .++ +++||++.++|.++.... ...||+|....
T Consensus 100 d---~--~~~~~~~~lG~~~i~l~~l~~~~----~~~W~~L~~~~ 135 (141)
T 1v27_A 100 A---R--VREEESEFLGEILIELETALLDD----EPHWYKLQTHD 135 (141)
T ss_dssp C---S--SSSCCBCCCEEEEEEGGGCCCSS----EEEEEECBCCS
T ss_pred C---C--CcCCCCceEEEEEEEccccCCCC----CCceEECcccc
Confidence 9 4 455 899999999999987542 67899999443
No 71
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.55 E-value=9.5e-15 Score=147.26 Aligned_cols=97 Identities=23% Similarity=0.383 Sum_probs=85.4
Q ss_pred CcEEEEEEEEeecCC-------CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEE-ecC
Q 001987 3 STRLYVYVLQGQDLL-------AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVF-QHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-------~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~-D~d 69 (985)
.+.|.|+|++|+||+ .+||||+|++.+ .++||+++++|+||+|||+|.|.+ ......|.|+|| |+|
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v-~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDE-SPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSS-CCTTEEEEEEEEEECS
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEe-cCCCCEEEEEEEEcCC
Confidence 478999999999998 479999999964 378999999999999999999998 456789999999 999
Q ss_pred CCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++..+. ....||+|.
T Consensus 108 ---~--~~~d~~iG~~~i~l~~l~~~~---~~~~W~~L~ 138 (171)
T 2q3x_A 108 ---R--MDHKCFMGVAQILLEELDLSS---MVIGWYKLF 138 (171)
T ss_dssp ---T--TCSSEEEEEEEECGGGSCTTS---CEEEEEECB
T ss_pred ---C--CCCCCEEEEEEEEHHHcccCC---CcceeEECC
Confidence 4 578999999999999998552 467899998
No 72
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=8e-15 Score=143.94 Aligned_cols=98 Identities=22% Similarity=0.412 Sum_probs=84.4
Q ss_pred CcEEEEEEEEeecCC-C------------CCcEEEEEEC---CeEEeecCccCCCCCeEeeEEEEEEec--CCCceEEEE
Q 001987 3 STRLYVYVLQGQDLL-A------------KDSYVKVQIG---KHKSKSRILKNNSNPVWNEEFVFRVHN--IDDEELVVS 64 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-~------------~DPyv~v~l~---~~~~kT~v~~~t~nP~wnE~f~f~v~~--~~~~~L~~~ 64 (985)
.+.|.|+|++|+||+ . +||||+|++. ..+++|+++++++||+|||+|.|.+.. .....|.|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~ 104 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLT 104 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEE
Confidence 578999999999998 2 7999999997 356899999999999999999999852 245689999
Q ss_pred EEecCCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 65 VFQHNDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 65 V~D~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
|||+| + .+++++||++.++|.++.... ....|+.|.
T Consensus 105 V~d~d---~--~~~~~~iG~~~i~l~~l~~~~---~~~~w~~L~ 140 (147)
T 2enp_A 105 VVDFD---K--FSRHCVIGKVSVPLCEVDLVK---GGHWWKALI 140 (147)
T ss_dssp EECCS---T--TCCSCCCEEEEEETTTSCTTT---CCCEEECCB
T ss_pred EEECC---C--CcCCcEEEEEEEechhcCCCC---CccEEEEee
Confidence 99999 4 578999999999999997653 357899998
No 73
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.53 E-value=3.5e-14 Score=170.48 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=102.3
Q ss_pred CCeEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----EEEEeeeccCC-CCCeEeEEEEEEeecCCCCEEEEEEEe
Q 001987 534 DGWVLTVALVEGVNLASSEM--TGLSDPYVVFTCNG-----KTRTSSVQLQT-CDPQWHDILEFDAMEEPPSVLDVEVFD 605 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~--~g~~DPyv~v~~~~-----~~~kT~~~~~t-lnP~Wne~f~f~v~~~~~~~L~v~V~D 605 (985)
..+.|+|+|++|++|+..|. +|.+||||+|.+.+ .+++|++++++ +||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999999884 78999999999954 68999999997 999999999999755545799999999
Q ss_pred cCCCCCCCCccceEEEEeeccccCcccceEEEccccccCC-cceeEEEEEeee
Q 001987 606 FDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQS-AQSKVHLRIFLE 657 (985)
Q Consensus 606 ~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~-~~g~l~l~~~ls 657 (985)
+|. +++|++||++.|||..+..+. .|++|.+..+.. ..+.|.+++.+.
T Consensus 575 ~D~-~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDS-SSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCS-SSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCC-CCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 998 789999999999999987754 599998755443 457788877653
No 74
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1.7e-14 Score=140.69 Aligned_cols=99 Identities=26% Similarity=0.434 Sum_probs=83.3
Q ss_pred CcEEEEEEEEeecCC-----CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL-----AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-----~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d~ 70 (985)
.+.|.|+|++|+||+ .+||||+|++.+ .+++|+++++|+||+|||+|.|.++ +.....|.|+|||+|
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d- 101 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG- 101 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC-
T ss_pred CCEEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC-
Confidence 578999999999998 279999999953 5689999999999999999999985 224569999999999
Q ss_pred CCCCCCC--CCCeeEEEEEeCccccccCCCCCCCeEEEeec
Q 001987 71 DSGLFGS--SGELMGRVRVPVSSIAAEDNHMLPPTWFSLET 109 (985)
Q Consensus 71 ~~~~~~~--~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~ 109 (985)
+ .+ .+++||++.++|.++.... ....||+|.+
T Consensus 102 --~--~~~~~~~~iG~~~i~l~~~~~~~---~~~~W~~L~~ 135 (142)
T 2dmg_A 102 --G--FLSKDKGLLGKVLVALASEELAK---GWTQWYDLTE 135 (142)
T ss_dssp --C--SSCCSCCCCEEEEEECCCSTTTT---CBCCBCCCBC
T ss_pred --C--ccccCCcEEEEEEEecccccccc---cccceeeccC
Confidence 4 33 3579999999999987653 4678999983
No 75
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.53 E-value=2.9e-14 Score=138.17 Aligned_cols=86 Identities=24% Similarity=0.483 Sum_probs=75.5
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEEEec--CCCceEEEEEEecC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFRVHN--IDDEELVVSVFQHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~v~~--~~~~~L~~~V~D~d 69 (985)
.+.|.|+|++|+||+ .+||||++++.+ .+++|+++++++||.|||+|.|.++. .....|.|+|||+|
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 578999999999998 689999999974 46899999999999999999999852 23478999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCcccc
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIA 93 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~ 93 (985)
. .+++++||++.++|.++.
T Consensus 95 ---~--~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 95 ---K--LSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp ---S--SSCCEEEEEEEESSSSCH
T ss_pred ---C--CCCCcEEEEEEEccccCC
Confidence 4 578999999999999754
No 76
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.52 E-value=3.5e-14 Score=141.31 Aligned_cols=101 Identities=32% Similarity=0.505 Sum_probs=83.9
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEEEec--CCCceEEEEEEecC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFRVHN--IDDEELVVSVFQHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~v~~--~~~~~L~~~V~D~d 69 (985)
.+.|.|+|++|+||+ .+||||+|++.+ .+++|+++++|+||.|||+|.|.++. .....|.|+|||+|
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 578999999999998 689999999963 46899999999999999999999852 23578999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCcccccc---------CCCCCCCeEEEee
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAE---------DNHMLPPTWFSLE 108 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~---------~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|..+..+ ..+.....||+|.
T Consensus 104 ---~--~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 104 ---K--IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp ---S--SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred ---C--CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECc
Confidence 4 57899999999999964211 1223567899998
No 77
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.52 E-value=4.4e-14 Score=141.64 Aligned_cols=101 Identities=25% Similarity=0.444 Sum_probs=84.1
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEECC-----eEEeecCccCCCCCeEeeEEEEEEec--CCCceEEEEEEecC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIGK-----HKSKSRILKNNSNPVWNEEFVFRVHN--IDDEELVVSVFQHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~~-----~~~kT~v~~~t~nP~wnE~f~f~v~~--~~~~~L~~~V~D~d 69 (985)
.+.|.|+|++|+||+ .+||||+|++.+ .+++|+++++|+||+|||+|.|.+.. .....|.|+|||+|
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 578999999999998 589999999975 57999999999999999999999852 34679999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCcccccc---------CCCCCCCeEEEee
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAE---------DNHMLPPTWFSLE 108 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~---------~~~~~~~~W~~L~ 108 (985)
+ .+++++||++.++|.++... ..+.....|+.|.
T Consensus 116 ---~--~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 158 (166)
T 2cm5_A 116 ---I--GKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQ 158 (166)
T ss_dssp ---S--SSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECB
T ss_pred ---C--CCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECC
Confidence 4 57899999999999986421 1223456777777
No 78
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.51 E-value=7.9e-14 Score=137.78 Aligned_cols=84 Identities=32% Similarity=0.515 Sum_probs=74.1
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC--Ce---EEeecCccCCCCCeEeeEEEEEEec--CCCceEEEEEEecC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG--KH---KSKSRILKNNSNPVWNEEFVFRVHN--IDDEELVVSVFQHN 69 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~--~~---~~kT~v~~~t~nP~wnE~f~f~v~~--~~~~~L~~~V~D~d 69 (985)
.+.|.|+|++|+||+ .+||||+|++. +. +++|+++++|+||.|||+|.|.+.. .....|.|+|||+|
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 578999999999999 68999999994 32 6799999999999999999999853 23578999999999
Q ss_pred CCCCCCCCCCCeeEEEEEeCcc
Q 001987 70 DDSGLFGSSGELMGRVRVPVSS 91 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~ 91 (985)
+ .+++++||++.++|.+
T Consensus 109 ---~--~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 ---R--GSRNEVIGRLVLGATA 125 (153)
T ss_dssp ---T--TSCCEEEEEEEESTTC
T ss_pred ---C--CCCCcEEEEEEECCCC
Confidence 4 5789999999999988
No 79
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.49 E-value=2.4e-14 Score=172.88 Aligned_cols=105 Identities=17% Similarity=0.284 Sum_probs=96.9
Q ss_pred CCeEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CEEEEeeeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecC
Q 001987 534 DGWVLTVALVEGVNLAS---SEMTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFD 607 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~---~d~~g~~DPyv~v~~~---~~~~kT~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d 607 (985)
..|.|+|+|++|++|++ +|.+|.+||||+++++ .++++|+++++++||+|||+|.|.+.......|+|+|||+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 46899999999999999 8888999999999998 46899999999999999999999976656779999999999
Q ss_pred CCCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 608 GPFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 608 ~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
. ++ |++||++.|+|.++..+...+.|++|.+
T Consensus 96 ~-~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 96 Y-VM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp S-SS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred C-CC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 8 78 9999999999999988888899999985
No 80
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.47 E-value=2e-13 Score=136.48 Aligned_cols=84 Identities=23% Similarity=0.367 Sum_probs=71.5
Q ss_pred CcEEEEEEEEeecCC---CCCcEEEEEECCeEEeecCcc-CCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCCCCCC
Q 001987 3 STRLYVYVLQGQDLL---AKDSYVKVQIGKHKSKSRILK-NNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGLFGSS 78 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~---~~DPyv~v~l~~~~~kT~v~~-~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~~~~~ 78 (985)
.+.|+|+|++|++|+ .+||||+|+ .+..+|++++ +++||+|||+|.|.+. .....|.|+|||+| .++
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~-~~~~~L~~~V~D~d------~~~ 83 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEIN-RLDLGLTVEVWNKG------LIW 83 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECC-CTTSEEEEEEEECC------SSC
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEee-CCCCEEEEEEEECC------CCC
Confidence 368999999999987 799999999 3345666665 6999999999999985 45567999999999 468
Q ss_pred CCeeEEEEEeCcccccc
Q 001987 79 GELMGRVRVPVSSIAAE 95 (985)
Q Consensus 79 d~~lG~~~i~L~~l~~~ 95 (985)
|++||++.|||.++...
T Consensus 84 dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CEEEEEEEEEGGGSCBC
T ss_pred CceEEEEEEEHHHhccc
Confidence 99999999999998754
No 81
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.47 E-value=1.9e-13 Score=162.43 Aligned_cols=114 Identities=22% Similarity=0.470 Sum_probs=99.3
Q ss_pred cEEEEEEEEeecCC------CCCcEEEEEECCeEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCCCCCCCC
Q 001987 4 TRLYVYVLQGQDLL------AKDSYVKVQIGKHKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDSGLFGS 77 (985)
Q Consensus 4 ~~L~V~V~~Ar~L~------~~DPyv~v~l~~~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~~~~~~ 77 (985)
+.|.|+|++|+||+ .+||||+|++++.+++|+++++|+||.|||+|.|.+..+....|+|+|||+| . .+
T Consensus 387 ~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d---~--~~ 461 (510)
T 3jzy_A 387 GRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRD---Q--FS 461 (510)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECC---S--SS
T ss_pred ceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCC---C--CC
Confidence 58999999999997 6899999999999999999999999999999999997677788999999999 4 57
Q ss_pred CCCeeEEEEEeCccccccCC-CCCCCeEEEeecCCCCCCCCccccEEEEEEEEE
Q 001987 78 SGELMGRVRVPVSSIAAEDN-HMLPPTWFSLETPKTRKFTNKDCGKILLTISLN 130 (985)
Q Consensus 78 ~d~~lG~~~i~L~~l~~~~~-~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~ 130 (985)
+|++||++.+||.++..+.. ..+...|++|. ....|+|.|.+.+.
T Consensus 462 ~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~--------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 462 PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH--------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB--------SSSSCEEEEEEEEE
T ss_pred CCCceEEEEEEHHHhccccCCCCceeeeecCC--------CCCCceEEEEEEEE
Confidence 89999999999999986521 12467899998 34579999988763
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.39 E-value=1.6e-12 Score=152.62 Aligned_cols=105 Identities=23% Similarity=0.371 Sum_probs=90.7
Q ss_pred cEEEEEEEEeecCC-----CCCcEEEEEECCeEEeecCccCCCCCeEeeEEEEEEe-cCCCceEEEEEEecCCCCCCCCC
Q 001987 4 TRLYVYVLQGQDLL-----AKDSYVKVQIGKHKSKSRILKNNSNPVWNEEFVFRVH-NIDDEELVVSVFQHNDDSGLFGS 77 (985)
Q Consensus 4 ~~L~V~V~~Ar~L~-----~~DPyv~v~l~~~~~kT~v~~~t~nP~wnE~f~f~v~-~~~~~~L~~~V~D~d~~~~~~~~ 77 (985)
+.|+|+|++|+||+ ++||||+|+++++++||+++++++||+|||+|.|.+. ....+.|+|+|||+| . .+
T Consensus 394 ~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D---~--~~ 468 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD---Y--GW 468 (540)
T ss_dssp EEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECC---S--SS
T ss_pred cEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECC---C--CC
Confidence 58999999999998 7899999999999999999999999999999999964 457889999999999 4 57
Q ss_pred CCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEe
Q 001987 78 SGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNG 131 (985)
Q Consensus 78 ~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~ 131 (985)
+|||||++.++|.. + ....|++|. .|.|.++++...
T Consensus 469 ~dD~LG~~~~~L~~---g----~~~~~~~l~-----------~G~l~~~~~~~c 504 (540)
T 3nsj_A 469 DDDLLGSCDRSPHS---G----FHEVTCELN-----------HGRVKFSYHAKC 504 (540)
T ss_dssp CCEEEEEEEECCCS---E----EEEEEEECS-----------SSEEEEEEEEEE
T ss_pred CCCEEEEEEEEeeC---C----cEEEEEEcC-----------CeEEEEEEEEEE
Confidence 88999999999873 1 245788765 599999888754
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.37 E-value=3.6e-14 Score=166.20 Aligned_cols=99 Identities=14% Similarity=0.273 Sum_probs=14.3
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCE-EEEeeeccCC---CCCeEeEEEEEEeecCCCCEEEEEEEe-cC--
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGK-TRTSSVQLQT---CDPQWHDILEFDAMEEPPSVLDVEVFD-FD-- 607 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~-~~kT~~~~~t---lnP~Wne~f~f~v~~~~~~~L~v~V~D-~d-- 607 (985)
.+.|+|+|++|++|+++| ||||+++++++ ..||+++++| +||+|||+|+|.+.. ....|.|+||| +|
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~-~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLP-AVRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCC-CccEEEEEEEecCCcc
Confidence 468999999999999987 99999999876 5699999999 999999999999643 35799999999 45
Q ss_pred -CCCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 608 -GPFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 608 -~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
. +++|++||++.|++.++..+...+.|++|.+
T Consensus 84 ~~-~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 84 RK-KDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ------------------------CCEECC----
T ss_pred cc-CCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 3 4789999999999999988888899999965
No 84
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.34 E-value=6.3e-12 Score=150.98 Aligned_cols=114 Identities=25% Similarity=0.376 Sum_probs=94.6
Q ss_pred CcEEEEEEEEeecCC--------CCCcEEEEEECC-----eEEeecCccCC-CCCeEeeEEEEEEecCCCceEEEEEEec
Q 001987 3 STRLYVYVLQGQDLL--------AKDSYVKVQIGK-----HKSKSRILKNN-SNPVWNEEFVFRVHNIDDEELVVSVFQH 68 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~--------~~DPyv~v~l~~-----~~~kT~v~~~t-~nP~wnE~f~f~v~~~~~~~L~~~V~D~ 68 (985)
.+.|+|+|++|++|+ .+||||+|.+.+ .++||++++++ +||+|||+|.|.+..+....|+|+|||+
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~ 575 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDY 575 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEEC
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEc
Confidence 568999999999998 479999999954 57999999997 9999999999998755567999999999
Q ss_pred CCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEE
Q 001987 69 NDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLN 130 (985)
Q Consensus 69 d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~ 130 (985)
| + .+++++||++.+||..+..+ .+|++|.+.. +. .-..|.|+|.+.+.
T Consensus 576 D---~--~~~dd~iG~~~ipl~~L~~G------~r~v~L~d~~-g~--~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 576 D---S--SSKNDFIGQSTIPWNSLKQG------YRHVHLLSKN-GD--QHPSATLFVKISIQ 623 (624)
T ss_dssp C---S--SSCCEEEEEEEEEGGGBCCE------EEEEEEECTT-SC--EEEEEEEEEEEEEE
T ss_pred C---C--CCCCceeEEEEEEHHHcCCC------cEEEeCCCCC-cC--CCCceEEEEEEEEE
Confidence 9 4 67999999999999999753 4699998433 22 22467888888774
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.26 E-value=1.7e-11 Score=148.16 Aligned_cols=97 Identities=27% Similarity=0.434 Sum_probs=86.2
Q ss_pred CcEEEEEEEEeecCC---------CCCcEEEEEECC---eEEeecCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL---------AKDSYVKVQIGK---HKSKSRILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~---------~~DPyv~v~l~~---~~~kT~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~ 70 (985)
.+.|+|+|++|++|+ .+||||+|++.+ .++||+++++|+||+|||+|.|.+.......|+|+|||+|
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D- 95 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN- 95 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC-
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC-
Confidence 468999999999997 489999999984 6799999999999999999999997667789999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEee
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLE 108 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~ 108 (985)
+ .+ |++||++.++|.++..+ .....|++|.
T Consensus 96 --~--~~-ddfIG~v~I~L~~L~~g---~~~~~w~~L~ 125 (749)
T 1cjy_A 96 --Y--VM-DETLGTATFTVSSMKVG---EKKEVPFIFN 125 (749)
T ss_dssp --S--SS-CEEEEEECCBSTTSCTT---CCCCEEEEET
T ss_pred --C--CC-CceeEEEEEEHHHcCCC---CceEEEEecC
Confidence 4 56 99999999999999754 3467999998
No 86
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=9.2e-12 Score=152.51 Aligned_cols=104 Identities=24% Similarity=0.440 Sum_probs=92.6
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEEeeeccCCCCCeEeEEEEEEeec-CCCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME-EPPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~~~~~tlnP~Wne~f~f~v~~-~~~~~L~v~V~D~d~ 608 (985)
.+.|.|+|++|++|+++|.+|.+||||++++ ...+.+|+++++++||+|||+|.|.+.. +....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4689999999999999999999999999999 4567899999999999999999999643 345579999999999
Q ss_pred CCCCCCccceEEEEeeccccCcccceEEEccc
Q 001987 609 PFDQATSLGHAEINFLKHTSTELADMWVSLEG 640 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~ 640 (985)
+++||+||++.+++.++.... .+.|+.|.+
T Consensus 251 -~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 251 -TSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp -SSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred -ccccccccccccchhhhccCC-cccceeecc
Confidence 799999999999999987654 588999975
No 87
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.24 E-value=5.7e-13 Score=156.09 Aligned_cols=124 Identities=15% Similarity=0.353 Sum_probs=19.5
Q ss_pred CcEEEEEEEEeecCC-CCCcEEEEEECCe-EEeecCccCC---CCCeEeeEEEEEEecCCCceEEEEEEec-CCCCCCCC
Q 001987 3 STRLYVYVLQGQDLL-AKDSYVKVQIGKH-KSKSRILKNN---SNPVWNEEFVFRVHNIDDEELVVSVFQH-NDDSGLFG 76 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~-~~DPyv~v~l~~~-~~kT~v~~~t---~nP~wnE~f~f~v~~~~~~~L~~~V~D~-d~~~~~~~ 76 (985)
.+.|+|+|++|+||+ +.||||++++++. .+||+++++| +||.|||+|.|.+. +....|.|+|||. |...+ .
T Consensus 10 ~~~L~V~VieAk~L~~~ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~v~V~d~~d~~~~--~ 86 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKKRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALRLHLYRDSDKKRK--K 86 (483)
T ss_dssp EECC---------------------------------------------CCEECC-------------------------
T ss_pred ccEEEEEEEEcCCcCCCCCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEEEEEEecCCcccc--C
Confidence 468999999999999 6699999999876 5799999999 99999999999963 3358999999994 41002 4
Q ss_pred CCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCC-------------------CCCccccEEEEEEEEEec
Q 001987 77 SSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRK-------------------FTNKDCGKILLTISLNGK 132 (985)
Q Consensus 77 ~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~-------------------~~~~~~G~I~lsl~~~~~ 132 (985)
+++++||++.||+.++..+ .....||+|..++..+ ......|.|+|.+.|.+.
T Consensus 87 ~~d~~lG~v~i~l~~l~~~---~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 87 DKAGYVGLVTVPVATLAGR---HFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp -----------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred CCCceEEEEEEEHHHhcCC---CCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 6899999999999999865 2467899996444310 012346888888888653
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.14 E-value=1.1e-10 Score=142.62 Aligned_cols=112 Identities=14% Similarity=0.193 Sum_probs=91.0
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------EEEEeeeccC-CCCCeEeEE-EEEE-eecCCCCEEEEEEE
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-------KTRTSSVQLQ-TCDPQWHDI-LEFD-AMEEPPSVLDVEVF 604 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~-------~~~kT~~~~~-tlnP~Wne~-f~f~-v~~~~~~~L~v~V~ 604 (985)
.+.|+|+|++|++|+.. .+||||+|.+.+ ++++|+++++ ++||+|||+ |.|. +..+....|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 689999999965 6789999875 699999998 9998 65455569999999
Q ss_pred ecCCCCCCCCccceEEEEeeccccCcccceEEEccccccCCc-ceeEEEEEeeec
Q 001987 605 DFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSA-QSKVHLRIFLEN 658 (985)
Q Consensus 605 D~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~-~g~l~l~~~ls~ 658 (985)
|+| +|+||++.|||..+..+. .+++|.+..+... .+.|.+.+.+..
T Consensus 725 D~d-----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN-----GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT-----SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC-----CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 975 689999999999998764 4788887655544 367777776543
No 89
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.11 E-value=1.1e-10 Score=143.28 Aligned_cols=112 Identities=16% Similarity=0.243 Sum_probs=90.7
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEEeeeccC-CCCCeEeE-EEEEE-eecCCCCEEEEEEEe
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQ-TCDPQWHD-ILEFD-AMEEPPSVLDVEVFD 605 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~~~~~-tlnP~Wne-~f~f~-v~~~~~~~L~v~V~D 605 (985)
...|+|+|++|++|+.. .+||||+|.+.+ .+++|+++++ ++||+||| .|.|. +..+....|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 45899999999999853 689999999964 3579999876 69999999 69998 544555689999999
Q ss_pred cCCCCCCCCccceEEEEeeccccCcccceEEEccccccCC-cceeEEEEEeeec
Q 001987 606 FDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQS-AQSKVHLRIFLEN 658 (985)
Q Consensus 606 ~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~-~~g~l~l~~~ls~ 658 (985)
+| ||+||++.|||..|..+. .+++|.+..+.. ..+.|.+.+.+..
T Consensus 800 ~d-----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 800 EG-----GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp TT-----TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CC-----ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEEEe
Confidence 76 689999999999998764 468888765543 5678888887654
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.09 E-value=1.8e-10 Score=141.52 Aligned_cols=111 Identities=16% Similarity=0.218 Sum_probs=88.1
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEEee-ecc-CCCCCeEeE-EEEE-EeecCCCCEEEEEE
Q 001987 534 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSS-VQL-QTCDPQWHD-ILEF-DAMEEPPSVLDVEV 603 (985)
Q Consensus 534 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~-~~~-~tlnP~Wne-~f~f-~v~~~~~~~L~v~V 603 (985)
..+.|+|+|++|++|+. +.+||||+|.+.+ ++++|+ +++ +++||+||| .|.| .+..+....|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46799999999999985 4799999999943 468999 776 579999999 6999 76445556999999
Q ss_pred EecCCCCCCCCccceEEEEeeccccCcccceEEEccccccC-CcceeEEEEEee
Q 001987 604 FDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQ-SAQSKVHLRIFL 656 (985)
Q Consensus 604 ~D~d~~~~~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~-~~~g~l~l~~~l 656 (985)
||+| +++||++.|||..+..+. .|++|.+..+. -..+.|.+++.+
T Consensus 752 ~D~d-----~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG-----NKFLGHRIIPINALNSGY---HHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT-----TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEeC-----CCccceEeeehhhcCCCc---EEEeccCCCCCCCCceEEEEEEEE
Confidence 9986 689999999999997654 58888764433 334667777654
No 91
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.05 E-value=5.4e-10 Score=137.15 Aligned_cols=111 Identities=26% Similarity=0.378 Sum_probs=89.6
Q ss_pred CcEEEEEEEEeecCC--CCCcEEEEEECC------eEEeecCccC-CCCCeEee-EEEEE-EecCCCceEEEEEEecCCC
Q 001987 3 STRLYVYVLQGQDLL--AKDSYVKVQIGK------HKSKSRILKN-NSNPVWNE-EFVFR-VHNIDDEELVVSVFQHNDD 71 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~--~~DPyv~v~l~~------~~~kT~v~~~-t~nP~wnE-~f~f~-v~~~~~~~L~~~V~D~d~~ 71 (985)
...|.|+|++|++|+ .+||||+|.+.+ .++||+++++ ++||+||| +|.|. |..+....|+|+|||+|
T Consensus 724 ~~~L~V~Visaq~L~~~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d-- 801 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG-- 801 (885)
T ss_dssp CEEEEEEEEEEESCCSSCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT--
T ss_pred ceEEEEEEEEeccCcccCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC--
Confidence 358999999999999 899999999964 3579999976 69999999 69998 76566678999999977
Q ss_pred CCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEe
Q 001987 72 SGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNG 131 (985)
Q Consensus 72 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~ 131 (985)
++|||++.+||..|..+ .++++|.+..+ . .-..|.|.|.+.+..
T Consensus 802 -------ddfiG~~~lpL~~L~~G------yR~vpL~~~~g-~--~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 802 -------GKFVGHRILPVSAIRSG------YHYVCLRNEAN-Q--PLCLPALLIYTEASD 845 (885)
T ss_dssp -------TEEEEEEEEETTTCCCE------EEEEEEECTTS-C--EEEEEEEEEEEEEEE
T ss_pred -------ccEEeeEEEEHHHcCCC------ceEEEecCCCC-C--ccCceEEEEEEEEEe
Confidence 37999999999999754 45788884322 1 235688888888863
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.05 E-value=8.3e-10 Score=134.90 Aligned_cols=111 Identities=23% Similarity=0.369 Sum_probs=90.0
Q ss_pred CcEEEEEEEEeecCC--CCCcEEEEEECC-------eEEeecCccC-CCCCeEeeE-EEEE-EecCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL--AKDSYVKVQIGK-------HKSKSRILKN-NSNPVWNEE-FVFR-VHNIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~--~~DPyv~v~l~~-------~~~kT~v~~~-t~nP~wnE~-f~f~-v~~~~~~~L~~~V~D~d~ 70 (985)
.+.|.|+|++|++|+ .+||||+|.+.+ .++||+++++ ++||+|||+ |.|. |..+....|+|.|||++
T Consensus 649 ~~~L~V~Visaq~L~~~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d- 727 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN- 727 (816)
T ss_dssp CEEEEEEEEEEECCCSSCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT-
T ss_pred ceEEEEEEEEcccCCCCCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC-
Confidence 368999999999999 799999999964 5689999886 699999998 9998 76556679999999976
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEe
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNG 131 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~ 131 (985)
++|||++.+||..|..+ .++++|.+. .+. .-..+.|.+.+.+..
T Consensus 728 --------ddfiG~~~ipL~~L~~G------yR~vpL~~~-~g~--~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 728 --------GKFIGHRVMPLDGIKPG------YRHVPLRNE-SNR--PLGLASVFAHIVAKD 771 (816)
T ss_dssp --------SCEEEEEEEESTTCCCE------EEEEEEECT-TSC--EEEEEEEEEEEEEEE
T ss_pred --------CCeeeEEEEEHHHcCCc------ceEEEEeCC-CCC--CCCceEEEEEEEEEe
Confidence 37999999999999854 467899843 322 234578888887754
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.01 E-value=1.1e-09 Score=134.72 Aligned_cols=110 Identities=22% Similarity=0.424 Sum_probs=87.0
Q ss_pred CCcEEEEEEEEeecCC--CCCcEEEEEECC------eEEeec-CccC-CCCCeEee-EEEE-EEecCCCceEEEEEEecC
Q 001987 2 VSTRLYVYVLQGQDLL--AKDSYVKVQIGK------HKSKSR-ILKN-NSNPVWNE-EFVF-RVHNIDDEELVVSVFQHN 69 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~--~~DPyv~v~l~~------~~~kT~-v~~~-t~nP~wnE-~f~f-~v~~~~~~~L~~~V~D~d 69 (985)
+.+.|.|+|++|++|+ .+||||+|.+.+ +++||+ ++++ ++||+||| +|.| .|..+....|+|.|||+|
T Consensus 676 ~~~~L~V~Visa~~L~~~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d 755 (799)
T 2zkm_X 676 VATTLSITVISGQFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG 755 (799)
T ss_dssp TCEEEEEEEEEEESCCSSCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT
T ss_pred eeeeEEEEEEeccccCccCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC
Confidence 3568999999999999 899999999942 357999 7764 79999999 6999 786555668999999987
Q ss_pred CCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEE
Q 001987 70 DDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISL 129 (985)
Q Consensus 70 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~ 129 (985)
++|||++.+||..+..+ .+|++|.+..+ . .-..+.|+|.+.+
T Consensus 756 ---------~d~iG~~~ipl~~L~~G------~r~v~L~~~~g-~--~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 756 ---------NKFLGHRIIPINALNSG------YHHLCLHSESN-M--PLTMPALFIFLEM 797 (799)
T ss_dssp ---------TEEEEEEEEEGGGBCCE------EEEEEEECTTC-C--EEEEEEEEEEEEE
T ss_pred ---------CCccceEeeehhhcCCC------cEEEeccCCCC-C--CCCceEEEEEEEE
Confidence 37999999999999753 56899983322 1 2235677777766
No 94
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.94 E-value=1.1e-09 Score=134.12 Aligned_cols=98 Identities=29% Similarity=0.540 Sum_probs=84.9
Q ss_pred CcEEEEEEEEeecCC------CCCcEEEEEEC-----CeEEeecCccCCCCCeEeeEEEEEEe-cCCCceEEEEEEecCC
Q 001987 3 STRLYVYVLQGQDLL------AKDSYVKVQIG-----KHKSKSRILKNNSNPVWNEEFVFRVH-NIDDEELVVSVFQHND 70 (985)
Q Consensus 3 ~~~L~V~V~~Ar~L~------~~DPyv~v~l~-----~~~~kT~v~~~t~nP~wnE~f~f~v~-~~~~~~L~~~V~D~d~ 70 (985)
.+.|.|+|++|++|+ .+||||++++. ..+.+|+++++|+||.|||+|.|.+. ......|.|+|||+|
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d- 249 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD- 249 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC-
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc-
Confidence 568999999999998 78999999993 45689999999999999999999985 344567999999999
Q ss_pred CCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeec
Q 001987 71 DSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLET 109 (985)
Q Consensus 71 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~ 109 (985)
+ .+++++||++.++|.++...+ ...|+.|..
T Consensus 250 --~--~~~dd~iG~~~i~l~~l~~~~----~~~w~~Lls 280 (674)
T 3pfq_A 250 --L--TSRNDFMGSLSFGISELQKAG----VDGWFKLLS 280 (674)
T ss_dssp --S--SSCCEECCBCCCBTTHHHHCC----EEEEEECBC
T ss_pred --c--ccccccccccccchhhhccCC----cccceeecc
Confidence 4 689999999999999998652 478999983
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.84 E-value=2.7e-08 Score=91.30 Aligned_cols=108 Identities=12% Similarity=0.207 Sum_probs=82.3
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEE----EEe-eeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCCC
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKT----RTS-SVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGP 609 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~~~~~----~kT-~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~~ 609 (985)
...|+|.+.++.--+-.......||||.+.+.... .+| ..+++|..|+|||.|.-.+ .....|.|.|++ |.
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V--~~Gr~l~i~Vfh-~a- 80 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHI--YEGRVIQIVLMR-AA- 80 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEEC--CTTCEEEEEEEE-ET-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeee--eCCEEEEEEEEc-CC-
Confidence 35788888776642222233478999999997543 144 6788999999999999884 556899999996 33
Q ss_pred CCCCCccceEEEEeeccc-----cCcccceEEEccccccCCcceeEEEEEe
Q 001987 610 FDQATSLGHAEINFLKHT-----STELADMWVSLEGKLAQSAQSKVHLRIF 655 (985)
Q Consensus 610 ~~~dd~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~~~~~g~l~l~~~ 655 (985)
.+|++.++|++.++. .+...+.|++|++ +|+|++.+-
T Consensus 81 ---~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP------~Gkl~~~i~ 122 (126)
T 1yrk_A 81 ---EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP------QAKVLMSVQ 122 (126)
T ss_dssp ---TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS------SCEEEEEEE
T ss_pred ---CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc------CcEEEEEEE
Confidence 289999999999986 3456789999994 788888774
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.77 E-value=4.3e-08 Score=91.09 Aligned_cols=110 Identities=11% Similarity=0.179 Sum_probs=84.5
Q ss_pred CeEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCEE----EEe-eeccCCCCCeEeEEEEEEeecCCCCEEEEEEEecCC
Q 001987 535 GWVLTVALVEGVNLASSE-MTGLSDPYVVFTCNGKT----RTS-SVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDG 608 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d-~~g~~DPyv~v~~~~~~----~kT-~~~~~tlnP~Wne~f~f~v~~~~~~~L~v~V~D~d~ 608 (985)
.+.|+|.+.++.-.+-.. .....||||.|.+.... .+| ..+++|..|+|||.|.-.+ .....|.|.||+ |.
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V--~~Gr~l~i~Vfh-~a 85 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHI--NKGRVMQIIVKG-KN 85 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECC--CSSCEEEEEEEC-SS
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeE--ECCeEEEEEEEc-CC
Confidence 457899987776544322 13368999999997442 456 6678899999999999884 556899999995 33
Q ss_pred CCCCCCccceEEEEeeccc-----cCcccceEEEccccccCCcceeEEEEEeee
Q 001987 609 PFDQATSLGHAEINFLKHT-----STELADMWVSLEGKLAQSAQSKVHLRIFLE 657 (985)
Q Consensus 609 ~~~~dd~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~~~~~g~l~l~~~ls 657 (985)
.+|++.++|++.+|. .+...+.|+.|++ +|+|++.+-+.
T Consensus 86 ----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP------~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 ----VDLISETTVELYSLAERCRKNNGKTEIWLELKP------QGRMLMNARYF 129 (138)
T ss_dssp ----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS------SCEEEEEEEEC
T ss_pred ----CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc------CcEEEEEEEEE
Confidence 289999999999987 3456799999994 78888888553
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.67 E-value=8.6e-08 Score=87.97 Aligned_cols=105 Identities=19% Similarity=0.306 Sum_probs=84.3
Q ss_pred cEEEEEEEEeec--CC----CCCcEEEEEECCe----EEee-cCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCCC
Q 001987 4 TRLYVYVLQGQD--LL----AKDSYVKVQIGKH----KSKS-RILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDDS 72 (985)
Q Consensus 4 ~~L~V~V~~Ar~--L~----~~DPyv~v~l~~~----~~kT-~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~~ 72 (985)
..|+|.+.++.- |+ ..||||.|.+... .++| ..+++|..|.|||+|.-.+ ...+.|.|.|++..
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V--~~Gr~l~i~Vfh~a--- 80 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHI--YEGRVIQIVLMRAA--- 80 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEEC--CTTCEEEEEEEEET---
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeee--eCCEEEEEEEEcCC---
Confidence 468888866653 33 5899999999743 3476 7788899999999999888 68899999999766
Q ss_pred CCCCCCCCeeEEEEEeCcccccc---CCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEE
Q 001987 73 GLFGSSGELMGRVRVPVSSIAAE---DNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLN 130 (985)
Q Consensus 73 ~~~~~~d~~lG~~~i~L~~l~~~---~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~ 130 (985)
. +|++.+.|++.+|... .+ ....-|+.|+ +.|+|++.+.|.
T Consensus 81 ---~---~fvAn~tV~~edL~~~c~~~~-g~~e~WvdLe----------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 ---E---EPVSEVTVGVSVLAERCKKNN-GKAEFWLDLQ----------PQAKVLMSVQYF 124 (126)
T ss_dssp ---T---EEEEEEEEEHHHHHHHHHTTT-TEEEEEEECB----------SSCEEEEEEEEE
T ss_pred ---C---CeeeEEEEEHHHHHhhhccCC-CceEEEEecc----------cCcEEEEEEEEe
Confidence 2 8999999999999854 22 3457899998 479999999885
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.64 E-value=5.7e-08 Score=90.25 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=85.0
Q ss_pred cEEEEEEEEeecCC-------CCCcEEEEEECCe----EEee-cCccCCCCCeEeeEEEEEEecCCCceEEEEEEecCCC
Q 001987 4 TRLYVYVLQGQDLL-------AKDSYVKVQIGKH----KSKS-RILKNNSNPVWNEEFVFRVHNIDDEELVVSVFQHNDD 71 (985)
Q Consensus 4 ~~L~V~V~~Ar~L~-------~~DPyv~v~l~~~----~~kT-~v~~~t~nP~wnE~f~f~v~~~~~~~L~~~V~D~d~~ 71 (985)
..|+|.+.++.-.+ ..||||.|.+... .++| ..+++|..|+|||+|.-.| ...+.|.|.|++..
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V--~~Gr~l~i~Vfh~a-- 85 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHI--NKGRVMQIIVKGKN-- 85 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECC--CSSCEEEEEEECSS--
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeE--ECCeEEEEEEEcCC--
Confidence 46888887766422 5899999999742 3788 7788899999999999887 68899999999655
Q ss_pred CCCCCCCCCeeEEEEEeCcccccc---CCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEE
Q 001987 72 SGLFGSSGELMGRVRVPVSSIAAE---DNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLN 130 (985)
Q Consensus 72 ~~~~~~~d~~lG~~~i~L~~l~~~---~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~ 130 (985)
. +|++.+.|++.+|... .+ ....-|+.|+ +.|+|++.+.|.
T Consensus 86 ----~---~fVAn~tV~~edL~~~ck~~~-g~~e~WvdLe----------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 ----V---DLISETTVELYSLAERCRKNN-GKTEIWLELK----------PQGRMLMNARYF 129 (138)
T ss_dssp ----C---SCCEEEEEESHHHHHHHHHTT-TCEEEEEECB----------SSCEEEEEEEEC
T ss_pred ----C---CeeeEEEEEHHHHHhhhccCC-CceEEEEecc----------cCcEEEEEEEEE
Confidence 2 8999999999999854 22 3457899998 479999999994
No 99
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=93.57 E-value=0.76 Score=47.37 Aligned_cols=148 Identities=11% Similarity=-0.011 Sum_probs=90.3
Q ss_pred eeeecCChHHHH-hccCCCchhHHHHHHcCCcceEEcccc-cCCCCceeEEEEEEeccc--cCCCceeeeeEEEEeeccC
Q 001987 818 NAELPISVKALM-EMFDGGKLEHQVMEKSGCHNYVTTPWD-LVKPGVCERHLSYRFNRH--VSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 818 ~~~~p~~~~~~~-~lf~~s~f~~~~~~~~~~~~~~~~~W~-~~~~~~~~R~~sy~~~~~--~~~~~~~~~~~q~~~~~~~ 893 (985)
..+++++++.+| .+|.+....... |-.+...+ .+.-+..+ .|.|...+| +.|...+=....+.....+
T Consensus 71 ~~~v~~~~~~v~~~~~~d~~~r~~W-------d~~~~~~~vle~~~~~t-~I~~~~~~p~~~~~~~~RDfv~~r~~~~~~ 142 (229)
T 1em2_A 71 KTFLPCPAELVYQEVILQPERMVLW-------NKTVTACQILQRVEDNT-LISYDVSAGAAGGVVSPRDFVNVRRIERRR 142 (229)
T ss_dssp EEEESSCHHHHHHHTTTCHHHHTTT-------CTTEEEEEEEEEETTTE-EEEEEEECCBTTTTBCCEEEEEEEEEEECS
T ss_pred EEEecCCHHHHHHHHHhCccchhhc-------ccccceEEEEEecCCCe-EEEEEEecCcCCCCcCCCeeEEEEEEEEcC
Confidence 456799999999 577544322222 11111111 01111112 356665444 4444444344433333334
Q ss_pred CCcEEEEEEEeeCCCCCC-CeEEEE---EEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLHDVPFD-DHFRVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 969 (985)
Q Consensus 894 ~~~~vv~~~~~~~dVPyg-d~F~v~---~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~ 969 (985)
+..+++..++.-+++|-. ++=+++ ..|.|++.+.++++|++.....++..+| +=+.++++.+..++-+.++.|-+
T Consensus 143 ~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~l~n~~~~~~~~~~~~~Lr~ 221 (229)
T 1em2_A 143 DRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGR-LPRYLIHQSLAATMFEFAFHLRQ 221 (229)
T ss_dssp SEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSS-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 556666778888888854 555666 5799999876568999999999999886 44777888887777777777766
Q ss_pred HHHHH
Q 001987 970 LVERE 974 (985)
Q Consensus 970 ~~~~~ 974 (985)
.++++
T Consensus 222 ~~~~~ 226 (229)
T 1em2_A 222 RISEL 226 (229)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66554
No 100
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=90.46 E-value=5.4 Score=40.85 Aligned_cols=149 Identities=8% Similarity=-0.051 Sum_probs=88.0
Q ss_pred eeeecCChHHHHhcc--CCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccC--CCceeeeeEEEEe-ecc
Q 001987 818 NAELPISVKALMEMF--DGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVS--IFGGEVTCTQQKS-PLA 892 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf--~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~--~~~~~~~~~q~~~-~~~ 892 (985)
..+++++++++++++ .+........... .+..+=.- .+.. -.|.|....+.. +...+=....+.. ...
T Consensus 72 ~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~--~~~~vle~--i~~~---~~i~~~~~~~~~~~~v~~RDfv~~r~~~~~~ 144 (231)
T 2r55_A 72 EGIVYGTLEEVWDCVKPAVGGLRVKWDENV--TGFEIIQS--ITDT---LCVSRTSTPSAAMKLISPRDFVDLVLVKRYE 144 (231)
T ss_dssp EEEESSCHHHHHHHHCC--CCSHHHHCTTC--SEEEEEEE--CSSS---EEEEEEECCCBTTTTBCCEEEEEEEEEEECT
T ss_pred EEEECCCHHHHHHHHHhhCcchhhhhcccc--ceeEEEEE--cCCC---EEEEEEEeccccCCccCCCeEEEEEEEEEcC
Confidence 446799999999976 3555444443322 22221111 1111 234555544432 2333333332222 233
Q ss_pred CCCcEEEEEEEeeCCCCC-CCeEEEEE---EEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHH
Q 001987 893 SGEGWIVNEVMSLHDVPF-DDHFRVHF---RYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMI 968 (985)
Q Consensus 893 ~~~~~vv~~~~~~~dVPy-gd~F~v~~---ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~ 968 (985)
++..+++..++..|++|- .++-+++. .|.|++.+.++++|++.....++..+| .=+.++.+.+..++-..++.|-
T Consensus 145 ~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~~~~Lr 223 (231)
T 2r55_A 145 DGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY-LPQNVVDSFFPRSMTRFYANLQ 223 (231)
T ss_dssp TSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEEEEeCCCCC-ccHHHHHHHHhHhHHHHHHHHH
Confidence 444556788888888875 46667765 588998875458999999999998876 3377888887777777777766
Q ss_pred HHHHHH
Q 001987 969 ELVERE 974 (985)
Q Consensus 969 ~~~~~~ 974 (985)
+.++++
T Consensus 224 ~~~~~~ 229 (231)
T 2r55_A 224 KAVKQF 229 (231)
T ss_dssp HHHHGG
T ss_pred HHHHHh
Confidence 666553
No 101
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=90.09 E-value=9.9 Score=36.13 Aligned_cols=141 Identities=7% Similarity=-0.003 Sum_probs=75.8
Q ss_pred eEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCCC
Q 001987 816 VYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGE 895 (985)
Q Consensus 816 ~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~~ 895 (985)
..+..++++++++|.++.|-.-..++. -++.++... ..+.....+++ .+++.......+-+........
T Consensus 6 ~~~~~i~ap~e~Vw~~l~D~e~~~~w~--p~~~~~~~~-----~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~ 74 (162)
T 2pcs_A 6 NGSIELKGTVEEVWSKLMDPSILSKCI--MGCKSLELI-----GEDKYKADLQI----GIAAVKGKYDAIIEVTDIKPPY 74 (162)
T ss_dssp EEEEEEESCHHHHHHHHTCHHHHHHHS--TTEEEEEEE-----ETTEEEEEEEE----CCGGGCEEEEEEEEEEEEETTT
T ss_pred eeEEEecCCHHHHHHHhcCHHHHHhhC--CCceEeEEe-----CCCeEEEEEEE----EeeeEEEEEEEEEEEEecCCCc
Confidence 346688999999999997665443333 233333221 12233222222 3444333332221222233445
Q ss_pred cEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEee--eeehhhhhhchHHHHHHHHHHHHHHHHH
Q 001987 896 GWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKS--TKFQQRITQNITEKFTHRLKEMIELVER 973 (985)
Q Consensus 896 ~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~--t~~K~~Ie~~~~~g~~~~~~~~~~~~~~ 973 (985)
.+++.....-. +..+.....|.++.... +.|+|...+.+.+.+. .++..++.+-+ +....++++.|++
T Consensus 75 ~~~~~~~~~~~----~~~~~~~~~~~l~~~~~--~gT~v~~~~~~~~~g~l~~~~~~l~~~~~----~~~~~~~~~~lk~ 144 (162)
T 2pcs_A 75 HYKLLVNGEGG----PGFVNAEGVIDLTPIND--ECTQLTYTYSAEVGGKVAAIGQRMLGGVA----KLLISDFFKKIQK 144 (162)
T ss_dssp EEEEEEEEEET----TEEEEEEEEEEEEESSS--SEEEEEEEEEEEEESGGGGGCHHHHHHHH----HHHHHHHHHHHHH
T ss_pred EEEEEEEecCC----CccEEEEEEEEEEecCC--CcEEEEEEEEEEECCCHHHhhHHHHHHHH----HHHHHHHHHHHHH
Confidence 66555443311 33456788899988665 6899999999888652 34444444433 3334555555555
Q ss_pred HHhh
Q 001987 974 EILF 977 (985)
Q Consensus 974 ~i~~ 977 (985)
.+..
T Consensus 145 ~~e~ 148 (162)
T 2pcs_A 145 EIAK 148 (162)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 5543
No 102
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=88.72 E-value=3.3 Score=42.34 Aligned_cols=146 Identities=5% Similarity=-0.129 Sum_probs=81.0
Q ss_pred eeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEecccc-CC-CceeeeeEEEEeeccCCC
Q 001987 818 NAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHV-SI-FGGEVTCTQQKSPLASGE 895 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~-~~-~~~~~~~~q~~~~~~~~~ 895 (985)
..+++++++++++++.+......... ++....- .+.-+..+ .|.|...++. .+ .+.+=....+.....++.
T Consensus 72 ~~~v~~~~~~v~~~l~d~~~r~~Wd~-----~~~~~~v-le~id~~~-~I~y~~~~~~~~~~v~~RDfv~~r~~~~~~~~ 144 (224)
T 1jss_A 72 QGVMDDVVNNVIDHIRPGPWRLDWDR-----LMTSLDV-LEHFEENC-CVMRYTTAGQLLNIISPREFVDFSYTVGYEEG 144 (224)
T ss_dssp EEEESSCHHHHHHHHSSSTTHHHHCS-----SEEEEEE-EEECSTTE-EEEEEEECCBTTTTBCCEEEEEEEEEEEETTE
T ss_pred EEEEeCCHHHHHHHHhCccccccccc-----ceeeEEE-EEEcCCCe-EEEEEEcccccCCCCCCCeEEEEEEEEEcCCe
Confidence 45779999999997643332222211 1111111 11112223 3445443332 22 233333333333333333
Q ss_pred cEEEEEEEeeCCCCCCCeEEEE---EEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHH
Q 001987 896 GWIVNEVMSLHDVPFDDHFRVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 972 (985)
Q Consensus 896 ~~vv~~~~~~~dVPygd~F~v~---~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~ 972 (985)
.+++..++..|++|- ++-+++ ..|.|++.++++++|+|.-...++..+| +=+..+.+.+-+++.+.++.+-+.++
T Consensus 145 ~vi~~~Sv~hp~~~~-g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~~~~Lr~~~~ 222 (224)
T 1jss_A 145 LLSCGVSVEWSETRP-EFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGM-IPQSAVDTAMASTLANFYSDLRKGLR 222 (224)
T ss_dssp EEEEEEECCCCCCCT-TSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSC-CCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeeeecCCCCC-CCEEEEecccEEEEEEcCCCCCceEEEEEEEeCCCCC-ccHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 445556666677764 677776 5699999877556899999998998874 23667777666666666655554443
No 103
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=87.34 E-value=3.2 Score=42.35 Aligned_cols=146 Identities=9% Similarity=0.013 Sum_probs=85.0
Q ss_pred eeeecCChHHHHhc-cCCCchhHHHHHHcCCcceEEcccc-cCCCCceeEEEEEEeccc--cCCCceeeeeEEEEeeccC
Q 001987 818 NAELPISVKALMEM-FDGGKLEHQVMEKSGCHNYVTTPWD-LVKPGVCERHLSYRFNRH--VSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 818 ~~~~p~~~~~~~~l-f~~s~f~~~~~~~~~~~~~~~~~W~-~~~~~~~~R~~sy~~~~~--~~~~~~~~~~~q~~~~~~~ 893 (985)
..++++++++++++ +.+......... .+...+ .+.-+..+ .|.|...++ ..|...+=..........+
T Consensus 60 ~~~v~~~~~~v~~~l~~d~~~r~~Wd~-------~~~~~~vle~~~~~t-~I~y~~~~~~~~~~v~~RDfv~~r~~~~~~ 131 (221)
T 3p0l_A 60 EVVVDQPMERLYEELVERMEAMGEWNP-------NVKEIKVLQKIGKDT-FITHELAAEAAGNLVGPRDFVSVRCAKRRG 131 (221)
T ss_dssp EEEESSCHHHHHHHHTTTGGGTTTSCT-------TCSEEEEEEECSSSE-EEEEEEECC---CCSCCEEEEEEEEEEECS
T ss_pred EEEEcCCHHHHHHHHHhccchhhhcCc-------chheEEEEEecCCCe-EEEEEeeccccCCccCCceEEEEEEEEEcC
Confidence 34679999999995 455432222211 111111 11111123 355654222 3344433333322222334
Q ss_pred CCcEEEEEEEeeCCCCC-CCeEEEE---EEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLHDVPF-DDHFRVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 969 (985)
Q Consensus 894 ~~~~vv~~~~~~~dVPy-gd~F~v~---~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~ 969 (985)
+..+++..++.-|++|- .++-+++ ..|.|++.+.++++|++.....++..+| .=+..+.+.+.+++-+.++.|-+
T Consensus 132 ~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~~~~Lr~ 210 (221)
T 3p0l_A 132 STCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGW-LPKSIINQVLSQTQVDFANHLRK 210 (221)
T ss_dssp SCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEEECEECCSS-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEEEEecCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 55555667777788886 5666666 4699999987445899999999998887 55888888877777665555554
Q ss_pred HHH
Q 001987 970 LVE 972 (985)
Q Consensus 970 ~~~ 972 (985)
.++
T Consensus 211 ~~~ 213 (221)
T 3p0l_A 211 RLE 213 (221)
T ss_dssp HTC
T ss_pred HHh
Confidence 443
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=87.04 E-value=3.1 Score=51.70 Aligned_cols=92 Identities=11% Similarity=0.198 Sum_probs=62.1
Q ss_pred CCcEEEEEEEEeecCC---CCCcEEEEEE--CCe----EEeecCccCCCCCeEeeEEEEEEe---cCCCceEEEEEEecC
Q 001987 2 VSTRLYVYVLQGQDLL---AKDSYVKVQI--GKH----KSKSRILKNNSNPVWNEEFVFRVH---NIDDEELVVSVFQHN 69 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~---~~DPyv~v~l--~~~----~~kT~v~~~t~nP~wnE~f~f~v~---~~~~~~L~~~V~D~d 69 (985)
++..++|+|..+.++. ..+-||.+.+ +++ ...|..+.-..+|.|||.+.|++. -|....|.|+||+..
T Consensus 215 ~~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVV 294 (940)
T ss_dssp CCSEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC
T ss_pred cCCceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEec
Confidence 4678999999999998 4566777666 332 244555554778999999999986 478899999999975
Q ss_pred CC--C----C-CCCCCCCeeEEEEEeCcccc
Q 001987 70 DD--S----G-LFGSSGELMGRVRVPVSSIA 93 (985)
Q Consensus 70 ~~--~----~-~~~~~d~~lG~~~i~L~~l~ 93 (985)
.. . + -.-..+..||-+.++|-+-.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 295 EKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp ----------------CEEEEEEEEESBCTT
T ss_pred CCccCccccccccccccceEEEEeeeEECCc
Confidence 10 0 0 00002347888888776543
No 105
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=86.92 E-value=11 Score=36.02 Aligned_cols=145 Identities=8% Similarity=0.029 Sum_probs=82.9
Q ss_pred EeeeecCChHHHHhccC-CCc-hhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCC
Q 001987 817 YNAELPISVKALMEMFD-GGK-LEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 894 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf~-~s~-f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~ 894 (985)
.+.+++++++++|.+|. +.+ ...+++..-...++..+.| ..+..|.++|. . +.....+.|. ....++.
T Consensus 7 ~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g----~~Gsir~~~~~---~-G~~~~~~kEr--l~~~D~~ 76 (155)
T 1icx_A 7 NEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNG----GPGTIKKIIAI---H-DGHTSFVLHK--LDAIDEA 76 (155)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSS----STTCEEEEEEE---S-SSSEEEEEEE--EEEEEGG
T ss_pred EEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCC----CCCeEEEEEEe---c-CCcceeEEEE--EEEEecc
Confidence 35578999999999885 654 4455664444334455655 23678999996 2 3222223333 3333333
Q ss_pred CcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 895 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 895 ~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
+.. +.-++.=.|+.-..+=.....+.+.+.+. +.| .|.|.++|.+..-. ..--.....++.+..+++.+.+|
T Consensus 77 ~~~-~~y~iieGd~~~~~~~~~~~~~~v~~~~~--~gs--~v~w~~~y~~~~~~---~~~~~~~~~~~~~~~~~k~ie~y 148 (155)
T 1icx_A 77 NLT-YNYSIIGGEGLDESLEKISYESKILPGPD--GGS--IGKINVKFHTKGDV---LSETVRDQAKFKGLGLFKAIEGY 148 (155)
T ss_dssp GTE-EEEEEEEETTSCTTEEEEEEEEEEEECGG--GCE--EEEEEEEEEESSSS---CCHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCE-EEEEEEecCCCccceEEEEEEEEEEecCC--CCE--EEEEEEEEEECCCC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22222222443223444666777877554 455 56788888764322 22222233478888999999999
Q ss_pred Hhhcc
Q 001987 975 ILFAT 979 (985)
Q Consensus 975 i~~~~ 979 (985)
+..+.
T Consensus 149 ll~~p 153 (155)
T 1icx_A 149 VLAHP 153 (155)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 87653
No 106
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=86.85 E-value=3.2 Score=51.52 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=59.1
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE----EEEeeeccCCCCCeEeEEEEEEee---cCCCCEEEEEEEe
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGK----TRTSSVQLQTCDPQWHDILEFDAM---EEPPSVLDVEVFD 605 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~~~~~tlnP~Wne~f~f~v~---~~~~~~L~v~V~D 605 (985)
...++|+|..+.++... ..++-||.+.+ |++ ...|+.+.-..+|.|||.++|++. -+....|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 35899999999999764 35677877665 554 345555555788999999999863 2446799999999
Q ss_pred cCCCC-C----------CCCccceEEEEeec
Q 001987 606 FDGPF-D----------QATSLGHAEINFLK 625 (985)
Q Consensus 606 ~d~~~-~----------~dd~lG~~~i~l~~ 625 (985)
..... + .+..||.+.++|-+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp EC----------------CEEEEEEEEESBC
T ss_pred ecCCccCccccccccccccceEEEEeeeEEC
Confidence 64310 1 12366777777655
No 107
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=85.29 E-value=18 Score=34.58 Aligned_cols=146 Identities=8% Similarity=-0.051 Sum_probs=82.2
Q ss_pred EeeeecCChHHHHhccC-CCc-hhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCC
Q 001987 817 YNAELPISVKALMEMFD-GGK-LEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 894 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf~-~s~-f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~ 894 (985)
.+.+++++++++|.+|. +.+ ...+++..-...++..+.| ..+..|.++|. + +.....+.|+ ....++.
T Consensus 8 ~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdg----g~Gsir~~~~~---~-g~~~~~~kEr--l~~~D~~ 77 (158)
T 2qim_A 8 DEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNG----GPGTIKKLTFI---E-GGESKYVLHK--IEAIDEA 77 (158)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSS----STTCEEEEEEE---E-TTEEEEEEEE--EEEEEGG
T ss_pred EEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCC----CCCeEEEEEEc---C-CCcceeEEEE--EEEEecC
Confidence 35578999999999885 654 4455554444334455655 23678999996 2 2221223333 3323333
Q ss_pred CcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 895 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 895 ~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
+..+--+.+. .|+.-..+=.....+.+.+.+. +.| .|.|.++|.+..-. ...-......++.+..+++.+++|
T Consensus 78 ~~~~~y~iie-G~~~~~~~~~~~~~~~v~~~~~--~gs--~v~wt~~y~~~~~~--~~~~~~~~~~~~~~~~~~k~ie~y 150 (158)
T 2qim_A 78 NLGYNYSIVG-GVGLPDTIEKISFETKLVEGAN--GGS--IGKVTIKIETKGDA--QPNEEEGKAAKARGDAFFKAIESY 150 (158)
T ss_dssp GTEEEEEEEE-ESSCCCSEEEEEEEEEEEECST--TCE--EEEEEEEEEESTTC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEe-ccCCccceEEEEEEEEEEecCC--CCE--EEEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222222 2432223444666778887655 455 56778888764211 111112233478889999999999
Q ss_pred Hhhcc
Q 001987 975 ILFAT 979 (985)
Q Consensus 975 i~~~~ 979 (985)
+..+.
T Consensus 151 ll~~p 155 (158)
T 2qim_A 151 LSAHP 155 (158)
T ss_dssp HHHCS
T ss_pred HHhCc
Confidence 87663
No 108
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=83.78 E-value=21 Score=34.15 Aligned_cols=146 Identities=5% Similarity=-0.019 Sum_probs=82.6
Q ss_pred EeeeecCChHHHHhccC-CCc-hhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCC
Q 001987 817 YNAELPISVKALMEMFD-GGK-LEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 894 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf~-~s~-f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~ 894 (985)
.+.+++++++++|.+|. +.+ ...+++..-...++..+.| ..+..|.++|. . +.+...+ +++....++.
T Consensus 7 ~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g----~~Gsir~~~~~---~-G~~~~~~--kErl~~~D~~ 76 (157)
T 1tw0_A 7 DETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNG----GVGTIKKITAN---E-GDKTSFV--LQKVDAIDEA 76 (157)
T ss_dssp EEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSS----STTCEEEEEEE---E-TTEEEEE--EEEEEEEETT
T ss_pred EEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCC----CCCeEEEEEee---C-CCccceE--EEEEEEEecc
Confidence 35578999999999874 554 4455554333334445555 23678999996 2 2221223 3333334344
Q ss_pred CcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 895 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 895 ~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
+.. +.-++.=.|+.-..+=.....+.+.+.+. +.| .|.|.++|.+..-. ...-......++.+..+++.+++|
T Consensus 77 ~~~-~~y~iieGd~~~~~~~~~~~~~~v~~~~~--~gs--~v~w~~~y~~~~~~--~~~~~~~~~~~~~~~~~~k~ie~y 149 (157)
T 1tw0_A 77 NLG-YDYSIVGGTGLPESLEKLSFETKVVAGSG--GGS--ISKVTLKFHTKGDA--PLSDAVRDDALAKGAGFFKAIEGY 149 (157)
T ss_dssp TTE-EEEEEEECTTSCTTEEEEEEEEEEEECSS--SSE--EEEEEEEEEESTTC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCE-EEEEEEecCCCccceEEEEEEEEEEecCC--CCE--EEEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 433 33333333443234445667778887654 455 56778888764211 111112233478889999999999
Q ss_pred Hhhcc
Q 001987 975 ILFAT 979 (985)
Q Consensus 975 i~~~~ 979 (985)
+..+.
T Consensus 150 ll~~p 154 (157)
T 1tw0_A 150 VLANP 154 (157)
T ss_dssp HHHCG
T ss_pred HHhCc
Confidence 97763
No 109
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=81.91 E-value=7.8 Score=48.56 Aligned_cols=90 Identities=14% Similarity=0.281 Sum_probs=61.0
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE----EEEeeeccCCCCCeEeEEEEEEee---cCCCCEEEEEEEe
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGK----TRTSSVQLQTCDPQWHDILEFDAM---EEPPSVLDVEVFD 605 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~~~~~tlnP~Wne~f~f~v~---~~~~~~L~v~V~D 605 (985)
...++|+|+.+.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.++|++. -+....|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 347899999999886432 345677888777 433 34454443 568899999999963 2456799999998
Q ss_pred cCCCC---CCCCccceEEEEeecc
Q 001987 606 FDGPF---DQATSLGHAEINFLKH 626 (985)
Q Consensus 606 ~d~~~---~~dd~lG~~~i~l~~l 626 (985)
....- ..+..||.+.++|-+-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 66410 1235788888888763
No 110
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=80.60 E-value=23 Score=33.90 Aligned_cols=143 Identities=9% Similarity=0.073 Sum_probs=79.5
Q ss_pred EeeeecCChHHHHhccC-CCc-hhHHHHH-HcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 817 YNAELPISVKALMEMFD-GGK-LEHQVME-KSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf~-~s~-f~~~~~~-~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
.+.+++++++++|.+|. +.. ...+++- .-...++..+.| ..+..|.++|. + +...+.+.| +....++
T Consensus 7 ~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdg----g~Gsvr~~~~~---~-G~~~~~~kE--rl~~~D~ 76 (159)
T 1e09_A 7 SEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDG----GPGTIKKITFG---E-GSQYGYVKH--KIDSIDK 76 (159)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS----STTCEEEEEEC---C-SSSCEEEEE--EEEEEET
T ss_pred EEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCC----CCceEEEEEec---C-CCCceEEEE--EEEEEcC
Confidence 35578999999999885 543 4445552 333334445655 23678999995 2 222123333 3333333
Q ss_pred CCcEEEEEEEeeCCC---CCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLHDV---PFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIEL 970 (985)
Q Consensus 894 ~~~~vv~~~~~~~dV---Pygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~ 970 (985)
.+. .+.-++.=.|+ ||-+ ....+.+.+.+. +.| .|.|.++|.+..-. .+.--..+..++.+..+++.
T Consensus 77 ~~~-~~~y~iieG~~~~~~~~~---~~~~~~v~~~~~--~gs--~v~wt~~y~~~~~~--~~~~~~~~~~~~~~~~~~k~ 146 (159)
T 1e09_A 77 ENY-SYSYTLIEGDALGDTLEK---ISYETKLVASPS--GGS--IIKSTSHYHTKGNV--EIKEEHVKAGKEKASNLFKL 146 (159)
T ss_dssp TTT-EEEEEECCCTTTGGGEEE---EEEEEEECCCTT--SSE--EEEEEEEEEECSSC--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEEEEecccCcccceE---EEEEEEEEecCC--CCE--EEEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHH
Confidence 333 33333333344 4433 455566665444 555 56778888764211 11111222447888999999
Q ss_pred HHHHHhhcc
Q 001987 971 VEREILFAT 979 (985)
Q Consensus 971 ~~~~i~~~~ 979 (985)
+++|+..+.
T Consensus 147 ie~yll~~~ 155 (159)
T 1e09_A 147 IETYLKGHP 155 (159)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHHhCh
Confidence 999997653
No 111
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=79.97 E-value=39 Score=31.46 Aligned_cols=140 Identities=11% Similarity=0.103 Sum_probs=74.7
Q ss_pred ceeEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 814 SKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 814 ~~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
.-..+.+++++++++|+++.|-....+++- ++.++. ...+. +.++....+++.......+-+......
T Consensus 14 ~i~~~~~i~ap~e~Vw~~l~D~~~~~~w~p--~~~~~~------~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~ 81 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEFLTDPKRFSRAFP--GFKSVE------VEDGS----FTIELRLSLGPLRGDARVRASFEDLEK 81 (157)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHGGGST--TEEEEE------EETTE----EEEEEEEESSSSEEEEEEEEEEEEEET
T ss_pred EEeeEEEEcCCHHHHHHHHcCHHHHHhhCC--CceEEE------ECCCE----EEEEEEEEEcceeEEEEEEEEEEecCC
Confidence 344567889999999999966543322221 322222 11222 233332344554333333222222334
Q ss_pred CCcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEe--eeeehhhhhhchHHHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLK--STKFQQRITQNITEKFTHRLKEMIELV 971 (985)
Q Consensus 894 ~~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k--~t~~K~~Ie~~~~~g~~~~~~~~~~~~ 971 (985)
.+.+++..... + .+.-|.....|.++..+ +.|+|.....+.+.+ ..++..++.+-+ +..++++++.|
T Consensus 82 ~~~i~~~~~~~--~--~~~~~~~~~~~~l~~~~---~gT~v~~~~~~~~~g~l~~~~~~~~~~~~----~~~~~~~~~~l 150 (157)
T 2ns9_A 82 PSKATVKGSGR--G--AGSTLDFTLRFAVEPSG---GGSRVSWVFEGNVGGLAASMGGRVLDSLA----RRMINDVISGV 150 (157)
T ss_dssp TTEEEEEEEEE--C--SSEEEEEEEEEEEEEET---TEEEEEEEEEEEEEEGGGGSCHHHHHHHH----HHHHHHHHHHH
T ss_pred CcEEEEEEEec--C--CCccEEEEEEEEEEeCC---CcEEEEEEEEEEECcCHHHhhHHHHHHHH----HHHHHHHHHHH
Confidence 45555543222 2 12346777889998765 489999998888865 334444554433 34555666666
Q ss_pred HHHHh
Q 001987 972 EREIL 976 (985)
Q Consensus 972 ~~~i~ 976 (985)
++.+.
T Consensus 151 k~~~e 155 (157)
T 2ns9_A 151 KRELG 155 (157)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66553
No 112
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=79.48 E-value=7.7 Score=48.60 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=60.7
Q ss_pred CCcEEEEEEEEeecCC-----CCCcEEEEEEC--Ce----EEeecCccCCCCCeEeeEEEEEEe---cCCCceEEEEEEe
Q 001987 2 VSTRLYVYVLQGQDLL-----AKDSYVKVQIG--KH----KSKSRILKNNSNPVWNEEFVFRVH---NIDDEELVVSVFQ 67 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~-----~~DPyv~v~l~--~~----~~kT~v~~~t~nP~wnE~f~f~v~---~~~~~~L~~~V~D 67 (985)
.+..++|+|+.|.++. ..+-||.+.+- ++ ..+|+.+ ...+|.|||.+.|++. -|....|.|+||+
T Consensus 353 ~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 3568999999999887 34668888873 22 2344333 3567889999999986 5788999999999
Q ss_pred cCCCCCCCCCCCCeeEEEEEeCcccc
Q 001987 68 HNDDSGLFGSSGELMGRVRVPVSSIA 93 (985)
Q Consensus 68 ~d~~~~~~~~~d~~lG~~~i~L~~l~ 93 (985)
...... .-..+..||-+.++|-+..
T Consensus 432 ~~~~~~-~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKG-AKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC--------CCEEEEEESBCTT
T ss_pred ecCccC-cccccceeEEeeeeeEccC
Confidence 772100 0012357888888876654
No 113
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=79.41 E-value=19 Score=36.09 Aligned_cols=145 Identities=14% Similarity=0.032 Sum_probs=80.5
Q ss_pred Eeeeec-CChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCcee--eeeEEEEeeccC
Q 001987 817 YNAELP-ISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGE--VTCTQQKSPLAS 893 (985)
Q Consensus 817 ~~~~~p-~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~--~~~~q~~~~~~~ 893 (985)
...+++ ++++++++++.+............ +..+= +..+ ...+.|+...| .|...+ |..........+
T Consensus 56 ~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~--~~~vl----e~~~--~~i~~~~~~~p-~p~~~RD~v~~~~~~~~~~~ 126 (214)
T 1ln1_A 56 VFGVLEDCSPTLLADIYMDSDYRKQWDQYVK--ELYEQ----ECNG--ETVVYWEVKYP-FPMSNRDYVYLRQRRDLDME 126 (214)
T ss_dssp EEEEETTSCHHHHHHHHHCHHHHHHHCTTEE--EEEEE----EETT--EEEEEEEECCC-TTSCCEEEEEEEEEEEECST
T ss_pred EEEEECCCCHHHHHHHHcCHHHHHHHHHHHh--hEEEe----ccCC--CEEEEEEEEcC-CCCCCceEEEEEEEEecccC
Confidence 355786 999999998755444444443322 22221 1123 33333334433 333322 222211112234
Q ss_pred CC-c-EEEEEEEeeCCCCC-CCeEE---EEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHH
Q 001987 894 GE-G-WIVNEVMSLHDVPF-DDHFR---VHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEM 967 (985)
Q Consensus 894 ~~-~-~vv~~~~~~~dVPy-gd~F~---v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~ 967 (985)
+. . +++..++..|++|- .++-+ ....|+|++.++ ++|++.....+...++ +=+.++.+.+.++.-..++.|
T Consensus 127 g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~--~~t~v~~~~~~Dp~G~-iP~~l~n~~~~~~~~~~l~~l 203 (214)
T 1ln1_A 127 GRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK--KGSKVFMYYFDNPGGQ-IPSWLINWAAKNGVPNFLKDM 203 (214)
T ss_dssp TCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS--SSEEEEEEEEECCSSC-CCHHHHHHHHHTHHHHHHHHH
T ss_pred CCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCC--CceEEEEEEEECCCCc-ccHHHHHHHHHHHhHHHHHHH
Confidence 43 3 45577888888986 34433 456799998876 8999999999998742 335555555555555555555
Q ss_pred HHHHHH
Q 001987 968 IELVER 973 (985)
Q Consensus 968 ~~~~~~ 973 (985)
-+.+++
T Consensus 204 ~k~~~~ 209 (214)
T 1ln1_A 204 ARACQN 209 (214)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 555543
No 114
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=79.13 E-value=24 Score=33.64 Aligned_cols=138 Identities=8% Similarity=0.013 Sum_probs=74.9
Q ss_pred EeeeecCChHHHHhcc-CC-CchhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccC-CCceeeeeEEEEeecc
Q 001987 817 YNAELPISVKALMEMF-DG-GKLEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVS-IFGGEVTCTQQKSPLA 892 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf-~~-s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~-~~~~~~~~~q~~~~~~ 892 (985)
.+.+++++++++|.+| .+ .++..+++ ..-...++..+.| ..+..|.++|. + + +. +.+.|. ....+
T Consensus 7 ~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdg----g~Gsvr~~~~~---~-g~~~-~~~kEr--l~~iD 75 (155)
T 2flh_A 7 TQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDG----GVGTILIFNFL---P-EVSP-SYQREE--ITEFD 75 (155)
T ss_dssp EEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSS----STTCEEEEEEC---T-TSSS-CEEEEE--EEEEE
T ss_pred EEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCC----CCCeEEEEEee---C-CCCC-cEEEEE--EEEEe
Confidence 3557899999999985 44 34545554 2323223444554 33778999995 2 2 22 344444 33333
Q ss_pred CCCcEEEEEEEeeCCC---CCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHH--HHHHHH
Q 001987 893 SGEGWIVNEVMSLHDV---PFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFT--HRLKEM 967 (985)
Q Consensus 893 ~~~~~vv~~~~~~~dV---Pygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~--~~~~~~ 967 (985)
+.+..+--+.+. .|+ ||-+ ....+.+.+.++ +.| .|.|.++|.+..=.-- -...++ +.+..+
T Consensus 76 ~~~~~~~y~iie-g~~l~~~~~~---~~~~i~v~p~~~--ggs--~v~wt~~y~~~~~~~~-----~~~~~~~~~~~~~~ 142 (155)
T 2flh_A 76 ESSHEIGLQVIE-GGYLSQGLSY---YKTTFKLSEIEE--DKT--LVNVKISYDHDSDIEE-----KVTPTKTSQSTLMY 142 (155)
T ss_dssp TTTTEEEEEEEE-EGGGGTTCSE---EEEEEEEEEEET--TEE--EEEEEEEEEC------------CCHHHHHHHHHHH
T ss_pred CCCCEEEEEEEe-ccccccCceE---EEEEEEEEECCC--CCE--EEEEEEEEEECCCCcc-----ChhHhhhHHHHHHH
Confidence 333322222222 243 6766 345566666554 566 6788888886432211 223445 778888
Q ss_pred HHHHHHHHhhc
Q 001987 968 IELVEREILFA 978 (985)
Q Consensus 968 ~~~~~~~i~~~ 978 (985)
++.++.|+..+
T Consensus 143 ~k~ie~yll~~ 153 (155)
T 2flh_A 143 LRRLERYLSNG 153 (155)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhhC
Confidence 99999988654
No 115
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=76.87 E-value=15 Score=45.74 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=65.3
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCEEE---EeeeccCCCCCeEeEEEEEEee---cCCCCEEEEEEEecC
Q 001987 536 WVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGKTR---TSSVQLQTCDPQWHDILEFDAM---EEPPSVLDVEVFDFD 607 (985)
Q Consensus 536 g~L~V~v~~a~~L~~~d~~g~~DPyv~v~~--~~~~~---kT~~~~~tlnP~Wne~f~f~v~---~~~~~~L~v~V~D~d 607 (985)
..++|+|+.+....... +..++-||.+.+ |++.. +|+.+.-+-+|.|||.++|.+. -+....|.++||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 47889999887522111 335677877654 55432 3444545668999999999863 244679999999865
Q ss_pred CCCC----------------CCCccceEEEEeeccccCcccceEEEccccccCCcceeEEEEEeeecC
Q 001987 608 GPFD----------------QATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRIFLENN 659 (985)
Q Consensus 608 ~~~~----------------~dd~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~g~l~l~~~ls~~ 659 (985)
.+ + +...||.+.++|-+ ..+.-.+|...|.+|....
T Consensus 297 ~~-~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd---------------~~~~l~~G~~~L~lw~~~~ 348 (961)
T 1e7u_A 297 KP-ALSGKTSAEMPSPESKGKAQLLYYVNLLLID---------------HRFLLRHGEYVLHMWQLSG 348 (961)
T ss_dssp C---------------------CEEEEEEEESBC---------------TTSBBCCEEEEEECEECCS
T ss_pred cC-ccccccccccccccccccceeEEEEeeeeec---------------CCCccccCCEEEEEeeCcc
Confidence 31 1 12345555555544 2233457888888886443
No 116
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=74.68 E-value=8.1 Score=39.13 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=33.6
Q ss_pred EEeecCccCCCCCeEeeEEEEEEe--cCCCceEEEEEEecC
Q 001987 31 KSKSRILKNNSNPVWNEEFVFRVH--NIDDEELVVSVFQHN 69 (985)
Q Consensus 31 ~~kT~v~~~t~nP~wnE~f~f~v~--~~~~~~L~~~V~D~d 69 (985)
..+|.|...+.+|.|+|++.+.++ ......|.|++++..
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 378888888999999999999997 456688999999876
No 117
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=73.11 E-value=66 Score=30.67 Aligned_cols=145 Identities=10% Similarity=0.017 Sum_probs=80.3
Q ss_pred eeeecCChHHHHhcc-CCCc-hhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCC
Q 001987 818 NAELPISVKALMEMF-DGGK-LEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 894 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf-~~s~-f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~ 894 (985)
+.+++++++++|.+| .+.. +..+++ ..-...++..+.| ..+..|.++|.- +.+.+ +..++....++.
T Consensus 8 ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdg----g~Gsir~~~~~~----g~~~~--~~kErl~~iD~~ 77 (159)
T 4a8u_A 8 EATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG----GPGTIKKISFPE----GFPFK--YVKDRVDEVDHT 77 (159)
T ss_dssp EEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSS----STTCEEEEECCT----TSSCS--EEEEEEEEEETT
T ss_pred EEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCC----CCceEEEEEEec----CCCcc--EEEEEEEEEccc
Confidence 457789999999987 4332 233444 2334345556666 246789999962 22222 333333334333
Q ss_pred CcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 895 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 895 ~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
+. .+.-++.=.|++-..+=.....+.+.+.++ .+| .|.|.+.|.+..=. .+.-......++....|+..+..|
T Consensus 78 ~~-~~~y~iiegd~l~~~~~~y~~ti~v~p~~~--ggs--~v~wt~~y~~~~~~--~~~~~~~k~~~~~~~~~~k~ie~y 150 (159)
T 4a8u_A 78 NF-KYSYSVIEGGPVGDTLEKISNEIKIVATPN--GGS--ILKINNKYHTKGDH--EVKAEQIKASKEMGETLLRAVESY 150 (159)
T ss_dssp TT-EEEEEEEEETTCBTTEEEEEEEEEEEECTT--SCE--EEEEEEEEEESSSC--CC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-EEEEEEeeCCCCccceEEEEEEEEEEECCC--Cce--EEEEEEEEEECCCC--cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 32 222223223554222333455666776655 566 47788888863211 222233445577888889999999
Q ss_pred Hhhcc
Q 001987 975 ILFAT 979 (985)
Q Consensus 975 i~~~~ 979 (985)
+..+.
T Consensus 151 ll~np 155 (159)
T 4a8u_A 151 LLAHS 155 (159)
T ss_dssp HHHCT
T ss_pred HhhCh
Confidence 87654
No 118
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=71.04 E-value=21 Score=33.51 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=57.4
Q ss_pred ccceeEeeeeEeeeeccccCcceEEEEeccccccccccCCcccccCCCeEEEEEecCCCccccCCCCcCCccccEEEEEe
Q 001987 678 KKGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKGRGLDARHGAKSQDEEGRLRFYFQ 757 (985)
Q Consensus 678 ~~gr~y~s~~~~~f~snif~~~~~~~i~~~di~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~k~~F~ 757 (985)
+.|++|++..-+||...-= ....+.+|+..|..++..++.+ . .++-|.+.+.... -....|...-+....+|..|.
T Consensus 38 k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~f-~-~s~Ki~l~l~~~~-~~~~~gp~~~s~~~~~kLsFr 113 (140)
T 2hth_B 38 DAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAGI-G-KSAKIVVHLHPAP-PNKEPGPFQSSKNSYIKLSFK 113 (140)
T ss_dssp CCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCTT-S-SCCEEEEEECCCC-CCSSSCCCSTTSCCEEEEEET
T ss_pred cCCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeecccc-c-cCceEEEEecCCC-ccCCCCCcccccCcEEEEEEc
Confidence 6699999999999976533 5578999999999999988653 1 2345555554321 011111111122345566555
Q ss_pred eccCcchhhHHHHHHHHhcc
Q 001987 758 SFVSFNDASRTIMALWRSRT 777 (985)
Q Consensus 758 SF~srd~a~~~i~~~w~~~~ 777 (985)
+ ...++=+..|.++++.+.
T Consensus 114 ~-Gg~~eF~~~L~~al~~k~ 132 (140)
T 2hth_B 114 E-HGQIEFYRRLSEEMTQRR 132 (140)
T ss_dssp T-SCHHHHHHHHHHHHHHCC
T ss_pred C-CCChHHHHHHHHHHHHhh
Confidence 4 344555666666666553
No 119
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=70.02 E-value=46 Score=32.38 Aligned_cols=143 Identities=9% Similarity=0.003 Sum_probs=76.5
Q ss_pred eeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEE-EEeeccCCCc
Q 001987 818 NAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQ-QKSPLASGEG 896 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q-~~~~~~~~~~ 896 (985)
..+++++++++|+++.+-.....+..... +..+=. . .++ ...+.++.+.| -|.+.+-.... ......++ .
T Consensus 32 ~~~v~~s~~~v~~~l~D~~~~~~W~~~~~--~~~vle---~-~~~-~~i~y~~~~~p-~p~~~RD~v~~~~~~~~~~g-~ 102 (189)
T 3qsz_A 32 EVRLKAAADDVVKVLRDANAFRQWMPDVA--ASELLK---A-TDT-EQYHYLDNSAP-WPVSNRDGVYHFTYEKAGDG-A 102 (189)
T ss_dssp EEEESSCHHHHHHHHHCGGGGGGTSTTEE--EEEEEE---E-CSS-EEEEEEEECCS-SSCCCEEEEEEEEEEECTTS-C
T ss_pred EEEEECCHHHHHHHHHhHHHhhhHHHhcC--EEEEEe---e-cCC-ceEEEEEeecC-CCcCCcceEEEEEEEECCCC-e
Confidence 45778999999998855444333332221 222111 1 112 33343334444 23333222222 22223344 4
Q ss_pred EEEEEEEeeCCCCCC-CeEE---EEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHH
Q 001987 897 WIVNEVMSLHDVPFD-DHFR---VHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 972 (985)
Q Consensus 897 ~vv~~~~~~~dVPyg-d~F~---v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~ 972 (985)
++|..+..-+.+|=- ++-+ ....|.|++ ++ ++|++.....++..+ .+-+..+.+.+.++.-..++.|-+.++
T Consensus 103 ~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~--~~t~vt~~~~~dp~G-~iP~~lvn~~~~~~~~~~l~~L~k~~~ 178 (189)
T 3qsz_A 103 ITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DA--DGVDVTYQMHASPGG-SIPSWLANQTVVETPFGTLKALRSHLR 178 (189)
T ss_dssp EEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CS--SSEEEEEEEEECSCS-SSCHHHHHHTTTHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CC--CeEEEEEEEEeCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444444556642 2212 357899999 65 789999999999874 344777777776666666655555554
Q ss_pred H
Q 001987 973 R 973 (985)
Q Consensus 973 ~ 973 (985)
+
T Consensus 179 ~ 179 (189)
T 3qsz_A 179 Q 179 (189)
T ss_dssp C
T ss_pred h
Confidence 3
No 120
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=69.31 E-value=19 Score=44.83 Aligned_cols=92 Identities=11% Similarity=0.095 Sum_probs=57.6
Q ss_pred CCcEEEEEEEEeecC--C---CCCcEEEEEE--CCeE---EeecCccCCCCCeEeeEEEEEEe---cCCCceEEEEEEec
Q 001987 2 VSTRLYVYVLQGQDL--L---AKDSYVKVQI--GKHK---SKSRILKNNSNPVWNEEFVFRVH---NIDDEELVVSVFQH 68 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L--~---~~DPyv~v~l--~~~~---~kT~v~~~t~nP~wnE~f~f~v~---~~~~~~L~~~V~D~ 68 (985)
++..++|.|+.+..+ + ..+-||.+.+ +++. .+|..+.-+.+|.|||.+.|++. -|....|.|+||+.
T Consensus 216 ~~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CCSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ccCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 356789999998752 2 3455666555 4332 34544444678999999999976 47889999999986
Q ss_pred CCCCCC-----------CCCCCCeeEEEEEeCcccc
Q 001987 69 NDDSGL-----------FGSSGELMGRVRVPVSSIA 93 (985)
Q Consensus 69 d~~~~~-----------~~~~d~~lG~~~i~L~~l~ 93 (985)
.....- ..++...||-+.++|-+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 511000 0012347777777766544
No 121
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=68.74 E-value=94 Score=30.64 Aligned_cols=150 Identities=4% Similarity=-0.122 Sum_probs=75.0
Q ss_pred cceeEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeecc
Q 001987 813 MSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLA 892 (985)
Q Consensus 813 ~~~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~ 892 (985)
...++..+++++++.++.++.+....+.+...-...++..+ +...+..|.++|.- +.+.+.+.| +....+
T Consensus 35 ~~~~~~~~I~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eG----dg~vGsVR~~t~~~----G~p~~~vkE--rL~~iD 104 (190)
T 3kl1_A 35 CTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISG----DGDVGSVREVTVIS----GLPASTSTE--RLEFVD 104 (190)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEES----SSSTTCEEEEEECS----SSSCEEEEE--EEEEEE
T ss_pred eeEEEEEEecCCHHHHHHHHhCCCChhHcccccCEEEEEcC----CCCCCeEEEEEecC----CCccceEEE--EEEEEe
Confidence 44556667899999999987322212222111111122222 22237899999952 222223333 333333
Q ss_pred CCCcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHH
Q 001987 893 SGEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 972 (985)
Q Consensus 893 ~~~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~ 972 (985)
+.+.. +.-++.-.|+|..+|-.+.....++..+.+.++| .|.|...|. --.+.=+..+..-+...|+.-++.|+
T Consensus 105 ~~~~~-~sY~iieG~~~~~~Y~s~~~v~~~~~~~~~~~gt--~V~Ws~~f~---~p~g~~~e~~~~~~~~~~~~gL~~L~ 178 (190)
T 3kl1_A 105 DDHRV-LSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYT--VVLESYTVD---IPEGNTEEDTKMFVDTVVKLNLQKLG 178 (190)
T ss_dssp TTTTE-EEEEEEEESSSCCSCEEEEEEEEEEC-CCCCEEE--EEEEEEEEE---CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCE-EEEEEEecCCccccEEEEEEEEecccccCCCCcE--EEEEEEEEE---cCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 43322 2222222489999988887776666533322445 566777774 11122222233334455555566666
Q ss_pred HHHhhc
Q 001987 973 REILFA 978 (985)
Q Consensus 973 ~~i~~~ 978 (985)
+.+...
T Consensus 179 ~~~e~~ 184 (190)
T 3kl1_A 179 VAATSA 184 (190)
T ss_dssp HHHHHS
T ss_pred HHHhcc
Confidence 655443
No 122
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=68.63 E-value=81 Score=29.90 Aligned_cols=142 Identities=4% Similarity=-0.073 Sum_probs=80.1
Q ss_pred eeeecCChHHHHhcc-CCC-chhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCC
Q 001987 818 NAELPISVKALMEMF-DGG-KLEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 894 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf-~~s-~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~ 894 (985)
+.+.++++++||..| .+. ++..+++ +...+.++ .+.| ..+-.|.++|.. +.+.+.+.| +.... |.
T Consensus 9 E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~v-eGdg----~~Gsir~~t~~~----g~~~~~~kE--rle~i-D~ 76 (154)
T 2wql_A 9 EITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDG----GAGTVRIITLPE----GSPITTMTV--RTDAV-NK 76 (154)
T ss_dssp EEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSS----STTCEEEEECCT----TCSCCEEEE--EEEEE-ET
T ss_pred EEEecCCHHHHHHHHhhcccccchhhcccceeEEEE-ECCC----CCCeEEEEEEcC----CCCceEEEE--EEEEE-eh
Confidence 446789999999854 444 3444433 34443332 2322 337789999952 333223333 33323 44
Q ss_pred CcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 895 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 895 ~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
....+.-++.=.|+.-..+=.+.....+.+.++ .+| .|.|.+.|.+..=. .+.-......++....+++.+..|
T Consensus 77 ~~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~--ggs--vvk~t~~Y~~~~~~--~~~ee~~~~~~~~~~~~~KaiEay 150 (154)
T 2wql_A 77 EALSYDSTVIDGDILLGFIESIETHMVVVPTAD--GGS--ITKTTAIFHTKGDA--VVPEENIKFADAQNTALFKAIEAY 150 (154)
T ss_dssp TTTEEEEEEEESGGGTTTEEEEEEEEEEEECTT--SCE--EEEEEEEEEESTTC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCEEEEEEEeccccccceEEEEEEEEEeeCCC--CcE--EEEEEEEEEECCCC--CCCHHHHHHHHHHHHhHHHHHHHH
Confidence 445555555556665444445566667777666 666 45778888874211 122223334456667778888888
Q ss_pred Hhh
Q 001987 975 ILF 977 (985)
Q Consensus 975 i~~ 977 (985)
+..
T Consensus 151 Lla 153 (154)
T 2wql_A 151 LIA 153 (154)
T ss_dssp HHH
T ss_pred Hhc
Confidence 765
No 123
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=67.78 E-value=60 Score=32.80 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=32.3
Q ss_pred EEEEeeeccCCCCCeEeEEEEEEeecC--CCCEEEEEEEecC
Q 001987 568 KTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFD 607 (985)
Q Consensus 568 ~~~kT~~~~~tlnP~Wne~f~f~v~~~--~~~~L~v~V~D~d 607 (985)
..++|-|...+.+|.|+|++.+.+..+ ....|.|+++..-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 467888999999999999999996433 3458999998854
No 124
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=66.80 E-value=5.1 Score=50.42 Aligned_cols=68 Identities=16% Similarity=0.311 Sum_probs=51.0
Q ss_pred CCcEEEEEEEEeecCC---CCCcEEEEEE--CCeE----EeecCccCCCCCeEeeEEEEEEe---cCCCceEEEEEEecC
Q 001987 2 VSTRLYVYVLQGQDLL---AKDSYVKVQI--GKHK----SKSRILKNNSNPVWNEEFVFRVH---NIDDEELVVSVFQHN 69 (985)
Q Consensus 2 ~~~~L~V~V~~Ar~L~---~~DPyv~v~l--~~~~----~kT~v~~~t~nP~wnE~f~f~v~---~~~~~~L~~~V~D~d 69 (985)
++..++|+|..+.++. ..+-||.+.+ +++. .+|..+.-..+|.|||.+.|++. -+....|.|+||+..
T Consensus 351 ~~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp CCSEEEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC-
T ss_pred cCCCEEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEec
Confidence 4578999999999988 4566777554 4432 34544444678999999999976 477899999999974
No 125
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=64.77 E-value=5.2 Score=50.37 Aligned_cols=70 Identities=21% Similarity=0.168 Sum_probs=50.4
Q ss_pred CeEEEEEEEEeecCCCCCCCCCCCcEEEEE--ECCEE----EEeeeccCCCCCeEeEEEEEEee---cCCCCEEEEEEEe
Q 001987 535 GWVLTVALVEGVNLASSEMTGLSDPYVVFT--CNGKT----RTSSVQLQTCDPQWHDILEFDAM---EEPPSVLDVEVFD 605 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~--~~~~~----~kT~~~~~tlnP~Wne~f~f~v~---~~~~~~L~v~V~D 605 (985)
...++|+|..+.++... ..++-||.+. -|++. ..|+.+.-..+|.|||.++|++. -+....|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 35899999999998764 3567776644 46554 34555555778999999999863 2446699999999
Q ss_pred cC
Q 001987 606 FD 607 (985)
Q Consensus 606 ~d 607 (985)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 126
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=64.06 E-value=99 Score=29.24 Aligned_cols=143 Identities=3% Similarity=-0.084 Sum_probs=77.7
Q ss_pred EeeeecCChHHHHhc-cCCCc-hhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 817 YNAELPISVKALMEM-FDGGK-LEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 817 ~~~~~p~~~~~~~~l-f~~s~-f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
.+.+++++++++|.+ +.+.. +..+++ ..-...++ .+.+ ..+..|.++|. -+.+.+.+.| +....++
T Consensus 8 ~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg----~~Gsir~~~~~----~g~~~~~~kE--rl~~iD~ 76 (154)
T 2vjg_A 8 LEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDG----GAGTVRIITLP----EGSPITTMTV--RTDAVNK 76 (154)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSS----STTCEEEEECC----TTCSCCEEEE--EEEEEET
T ss_pred EEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCC----CCceEEEEEec----CCCCceEEEE--EEEEEec
Confidence 355779999999997 54432 333444 23333334 3432 34778999995 2322223333 3333333
Q ss_pred CCcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVER 973 (985)
Q Consensus 894 ~~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~ 973 (985)
.+. .+.-++.=.|++-..+=.....+.+.+.+. ..| .|.|.+.|.+..= ..+.-......++....++..+..
T Consensus 77 ~~~-~~~y~iiegd~l~~~~~~~~~ti~v~p~~~--ggs--~v~wt~~y~~~~~--~~~~~~~~~~~~~~~~~~~k~ie~ 149 (154)
T 2vjg_A 77 EAL-SYDSTVIDGDILLGFIESIETHMVVVPTAD--GGS--ITKTTAIFHTKGD--AVVPEENIKFADAQNTALFKAIEA 149 (154)
T ss_dssp TTT-EEEEEEEESGGGTTTEEEEEEEEEEEECTT--SCE--EEEEEEEEEESTT--CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-EEEEEEEecCCCccceEEEEEEEEEEECCC--CcE--EEEEEEEEEECCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333 223333333543222334555667777655 455 4778888886321 112222344567888888888888
Q ss_pred HHhh
Q 001987 974 EILF 977 (985)
Q Consensus 974 ~i~~ 977 (985)
|+..
T Consensus 150 ylla 153 (154)
T 2vjg_A 150 YLIA 153 (154)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8865
No 127
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=62.44 E-value=73 Score=30.55 Aligned_cols=143 Identities=8% Similarity=0.062 Sum_probs=78.8
Q ss_pred EeeeecCChHHHHhcc-CCCchhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCC
Q 001987 817 YNAELPISVKALMEMF-DGGKLEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 894 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf-~~s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~ 894 (985)
.+.++++++++++.+| .+.....+++ +.-...++..+.| ...+..|.++|.. +++...+.|. ....++.
T Consensus 21 ~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~---gg~Gsir~~~~~~----gg~~~~~kEr--l~~iD~~ 91 (166)
T 2i9y_A 21 TDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDW---GTVGSIVFWNYVH----DGEAKVAKER--IEAVEPD 91 (166)
T ss_dssp EEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCS---CSTTCCCEEEEEE----TTEEEEEEEE--EEEEETT
T ss_pred EEEEecCCHHHHHHHHhcccccccccccccceEEEEEcCCC---CCCCeEEEEEEec----CCCceEEEEE--EEEEecc
Confidence 4557799999999997 4422222222 1223334444556 2336789999973 3322233333 3323333
Q ss_pred CcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 895 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 895 ~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
+ ..+.-++.=.|++ ..+=.....+.+.+.+++ +.| .|.|.++|.+..- -+..- ..+.+.+..+++.+.+|
T Consensus 92 ~-~~~~y~iieGd~~-~~~~~~~~ti~v~p~~~g-~gs--~v~wt~~ye~~~~---~~~~p--~~~~~~~~~~~k~ie~~ 161 (166)
T 2i9y_A 92 K-NLITFRVIEGDLM-KEYKSFLLTIQVTPKPGG-PGS--IVHWHLEYEKISE---EVAHP--ETLLQFCVEVSKEIDEH 161 (166)
T ss_dssp T-TEEEEEECCTTGG-GTEEEEEEEEEEEEEEET-TEE--EEEEEEEEEESST---TTCCT--HHHHHHHHHHHHHHHHH
T ss_pred C-cEEEEEEEeCCCC-CCeeEEEEEEEEEECCCC-CCc--EEEEEEEEEECCC---CCCCH--HHHHHHHHHHHHHHHHH
Confidence 3 3344444434552 233356777788775431 355 5778888875321 12111 35668888888888888
Q ss_pred Hhhc
Q 001987 975 ILFA 978 (985)
Q Consensus 975 i~~~ 978 (985)
+.++
T Consensus 162 l~~~ 165 (166)
T 2i9y_A 162 LLAE 165 (166)
T ss_dssp HHSC
T ss_pred HhhC
Confidence 8654
No 128
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=61.18 E-value=91 Score=30.04 Aligned_cols=142 Identities=11% Similarity=0.132 Sum_probs=78.2
Q ss_pred EeeeecCChHHHHhcc-CCCc-hhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 817 YNAELPISVKALMEMF-DGGK-LEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 817 ~~~~~p~~~~~~~~lf-~~s~-f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
.+.+++++++++|.+| .+.. +..+++ ..-...++..+.+ ..+..|.++|. ++. +.+.| +....++
T Consensus 13 ~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg----g~Gsir~~t~~-----g~~-~~~kE--rl~~iD~ 80 (168)
T 3rws_A 13 SEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDG----GPGTIKKLTFV-----GDF-GSTKQ--HIDMVDR 80 (168)
T ss_dssp EEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSS----STTCEEEEEES-----SSS-CEEEE--EEEEEET
T ss_pred EEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCC----CCCeEEEEEEc-----CCC-eEEEE--EEEEEcc
Confidence 3557799999999987 4432 233333 2222223334432 34778999984 322 23333 3333333
Q ss_pred CCcEEEEEEEeeCCC----CCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLHDV----PFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 969 (985)
Q Consensus 894 ~~~~vv~~~~~~~dV----Pygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~ 969 (985)
.+ ..+.-++.=.|+ ||-+ ....+.+.+.+. .+| .|.|.+.|.+..== ..+.-......++....++.
T Consensus 81 ~~-~~~sY~iiegd~l~~~p~~~---y~~ti~v~p~~~--ggs--~v~wt~~y~~~~~d-~~~~~e~~k~~~~~~~~~~k 151 (168)
T 3rws_A 81 EN-CAYTYSVYEGIALSDQPLEK---IVFEFKLVPTPE--EGC--IVKSTTKYYTKGDD-IELSKDYLEAGIERFEGFTK 151 (168)
T ss_dssp TT-TEEEEEECSSCCBTTBCEEE---EEEEEEEEECTT--SCE--EEEEEEEEEECSSS-CCCCHHHHHHHHHHHHHHHH
T ss_pred cC-CEEEEEEEccCcccCcCceE---EEEEEEEEECCC--Cce--EEEEEEEEEECCCc-cCCCHHHHHHHHHHHHHHHH
Confidence 33 333333333455 5554 444566776555 566 47788888863210 01212223456888889999
Q ss_pred HHHHHHhhcc
Q 001987 970 LVEREILFAT 979 (985)
Q Consensus 970 ~~~~~i~~~~ 979 (985)
.+..|+..+.
T Consensus 152 ~ie~yllanp 161 (168)
T 3rws_A 152 AVESFLLANP 161 (168)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCh
Confidence 9999998654
No 129
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=59.82 E-value=61 Score=30.87 Aligned_cols=116 Identities=14% Similarity=0.103 Sum_probs=77.2
Q ss_pred cEEEEEEEEeecCC-------CCCcEEEEEEC--Ce-EEeecCccCCCCCeEeeEEEEEEe-c------CCCceEEEEEE
Q 001987 4 TRLYVYVLQGQDLL-------AKDSYVKVQIG--KH-KSKSRILKNNSNPVWNEEFVFRVH-N------IDDEELVVSVF 66 (985)
Q Consensus 4 ~~L~V~V~~Ar~L~-------~~DPyv~v~l~--~~-~~kT~v~~~t~nP~wnE~f~f~v~-~------~~~~~L~~~V~ 66 (985)
+.+.++|.+|.-=+ ..+|..-+.+. .. .+-|.+.. ..+|.+|-+-.|.|. + .....|.++++
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELh 96 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVH 96 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEE
Confidence 46788888886322 35776666654 44 45565555 889999999999884 1 33468889988
Q ss_pred ecCCCCCCCCCCCCeeEEEEEeCccccccCCCCCCCeEEEeecCCCCCCCCccccEEEEEEEEEe
Q 001987 67 QHNDDSGLFGSSGELMGRVRVPVSSIAAEDNHMLPPTWFSLETPKTRKFTNKDCGKILLTISLNG 131 (985)
Q Consensus 67 D~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~W~~L~~~~~~~~~~~~~G~I~lsl~~~~ 131 (985)
... -+.-..||++.|+|.++....+ ....-.+|.....+ ...-|.|...+++..
T Consensus 97 qa~------g~~~~tla~~~I~l~~lLe~~~--~i~g~~~L~g~~g~---~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 97 QAY------STEYETIAACQLKFHEILEKSG--RIFCTASLIGTKGD---IPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEC------SSCEEEEEEEEECCSHHHHCCS--CEEEEEEECBSSSC---CTTSEEEEEEEEEEE
T ss_pred Eee------CCCceEEEEEEEEhHHhhCcCC--ceEEEEEEEcCCCC---cceEEEEEEEEEEec
Confidence 876 2345799999999999986532 12223466633221 146788888887754
No 130
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=55.62 E-value=63 Score=32.41 Aligned_cols=115 Identities=4% Similarity=-0.112 Sum_probs=55.9
Q ss_pred cceeEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeecc
Q 001987 813 MSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLA 892 (985)
Q Consensus 813 ~~~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~ 892 (985)
...++..++++++++++.++.+..-...+...-...++..+.| ...+.+|.++|.- +.+.+.+.| +....+
T Consensus 54 c~~~v~~~I~ApadkVW~lv~Df~~l~~w~p~V~s~e~~eGd~---g~vGsVR~lt~~~----G~p~~~vkE--rL~~lD 124 (208)
T 3jrs_A 54 CSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFE---MRVGCTRDVNVIS----GLPANTSRE--RLDLLD 124 (208)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEECCTTCC---CSTTCEEEEEECT----TSSCCEEEE--EEEEEE
T ss_pred EeEEEEEEEeCCHHHHHHHHhCcCChhHccccceEEEEecCCC---CCCCeEEEEEecC----CCccceEEE--EEEEEe
Confidence 3455566799999999998733221122222111111111111 1337799999952 222223333 333344
Q ss_pred CCCcEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEE
Q 001987 893 SGEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWL 943 (985)
Q Consensus 893 ~~~~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~ 943 (985)
+.+..+ .-++.-.|.|+.+|-. ...+.+... .++|+ |.|.+.|.
T Consensus 125 de~~~~-sYsIieG~lpv~~Y~s---ti~V~p~~~-g~~t~--V~Wt~~fe 168 (208)
T 3jrs_A 125 DDRRVT-GFSITGGEHRLRNYKS---VTTVHRFEK-EEEEE--RIWTVVLE 168 (208)
T ss_dssp TTTTEE-EEEEEESSSSCTTCEE---EEEEEEEEC--------CEEEEEEE
T ss_pred ccCCEE-EEEEeeCCcceeeEEE---EEEEEEccC-CCccE--EEEEEEEE
Confidence 433322 2222226899999875 334444322 13554 67888886
No 131
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=52.43 E-value=78 Score=32.28 Aligned_cols=104 Identities=9% Similarity=0.004 Sum_probs=65.0
Q ss_pred EEEEeccccCCCceeeeeEEEEee--ccCCCcEEEEEEEeeCCCCCCCeEEE---EEEEEEEecCCCCCccEEEEEEEEE
Q 001987 867 LSYRFNRHVSIFGGEVTCTQQKSP--LASGEGWIVNEVMSLHDVPFDDHFRV---HFRYEIEKSPLAHNACKCAIYIGIS 941 (985)
Q Consensus 867 ~sy~~~~~~~~~~~~~~~~q~~~~--~~~~~~~vv~~~~~~~dVPygd~F~v---~~ry~i~~~~~~~~~~~l~v~~~v~ 941 (985)
|.|...+++.|...+=....+... ..++..+++..++.-|++|--++=++ ...|.|++.++ ++|+|.....+.
T Consensus 120 I~y~~~~~p~p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~--~~t~vt~~~~~D 197 (237)
T 2pso_A 120 IYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGS--GKSRLTHICRID 197 (237)
T ss_dssp EEEEEECCSSSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECST--TCEEEEEEEEEC
T ss_pred EEEEEecCCCCcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCC--CCEEEEEEEEeC
Confidence 444443455555554444433332 35677777788888889997755553 47899998876 899999999999
Q ss_pred EEeeeeehhhhhhchHHHHHHHHHHHHHHHHHHHhhc
Q 001987 942 WLKSTKFQQRITQNITEKFTHRLKEMIELVEREILFA 978 (985)
Q Consensus 942 ~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~i~~~ 978 (985)
..+ |+=..+.+.. ....-.++.-|++.++..
T Consensus 198 p~G--~iP~~ln~~~----~~~~~~~l~~LR~~~~~~ 228 (237)
T 2pso_A 198 LKG--HSPEWYSKGF----GHLCAAEVARIRNSFQPL 228 (237)
T ss_dssp CSS--SCTTTTTTHH----HHHHHHHHHHHHHTTSCC
T ss_pred CCC--CchHHHHHHH----HHHHHHHHHHHHHHHHhh
Confidence 875 3434443323 333344566666665443
No 132
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=49.86 E-value=49 Score=31.51 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=75.4
Q ss_pred CeEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC--C-EEEEeeeccCCCCCeEeEEEEEEeecCC-------CCEEEEEE
Q 001987 535 GWVLTVALVEGVNLASSE-MTGLSDPYVVFTCN--G-KTRTSSVQLQTCDPQWHDILEFDAMEEP-------PSVLDVEV 603 (985)
Q Consensus 535 ~g~L~V~v~~a~~L~~~d-~~g~~DPyv~v~~~--~-~~~kT~~~~~tlnP~Wne~f~f~v~~~~-------~~~L~v~V 603 (985)
...+.|+|.++.--+..- ..+..+|..-+.+. . +...|.++. +.+|.+|-+-.|.|..+. ...|.+++
T Consensus 17 EnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lEL 95 (156)
T 2yrb_A 17 ENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEV 95 (156)
T ss_dssp CEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEE
T ss_pred CcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEE
Confidence 346677777765211110 02345777666664 3 455555554 999999988888863322 34788888
Q ss_pred EecCCCCCCCCccceEEEEeeccccCc-ccceEEEccccccC-CcceeEEEEEeeecC
Q 001987 604 FDFDGPFDQATSLGHAEINFLKHTSTE-LADMWVSLEGKLAQ-SAQSKVHLRIFLENN 659 (985)
Q Consensus 604 ~D~d~~~~~dd~lG~~~i~l~~l~~~~-~~~~w~~L~~~~~~-~~~g~l~l~~~ls~~ 659 (985)
+.-.. +.-..||++.|+|..+...+ ....-.+|.+..+. ..-|.|...+.+..+
T Consensus 96 hqa~g--~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 96 HQAYS--TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEECS--SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEEC
T ss_pred EEeeC--CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEecc
Confidence 87654 45579999999999976433 23445677765443 245666666655444
No 133
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=49.84 E-value=1.2e+02 Score=28.56 Aligned_cols=144 Identities=9% Similarity=0.073 Sum_probs=68.9
Q ss_pred eeEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccc-cCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 815 KVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWD-LVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 815 ~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~-~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
-.+...|+++++.+|..|++.....+..--. ++...... .-..|+. +.|+...+ -+... ..-+......
T Consensus 10 i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~---~~~~~~~~~d~~~Gg~---~~~~~~~~---~G~~~-~~g~v~e~~p 79 (164)
T 2l9p_A 10 IIFTRTFSAPINKVFDAYTKRELFEQWFHPQ---DASVTVYDFNATKGGS---AFYAIQAP---QMISY-TIAEYLQVDA 79 (164)
T ss_dssp EEECCEESSCHHHHHHHHHCHHHHTTTCCCT---TCEEEEEECCCSTTEE---EEEEEEET---TEEEE-EEEEESCCBT
T ss_pred EEEEEEeCCCHHHHHHHhCCHHHHHhccCCC---CceeeEEEEeccCCCE---EEEEEECC---CCCEE-EEEEEEEEcC
Confidence 3456789999999999986654222221111 12111111 1124443 33332112 11122 2212223555
Q ss_pred CCcEEEEEEEeeC-CCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLH-DVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 972 (985)
Q Consensus 894 ~~~~vv~~~~~~~-dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~ 972 (985)
.+.++..-..... +.|-+.-......|.|+..+ ..|+|.+... |...--...+++.+...|....+..|..+|+
T Consensus 80 ~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~---~gT~l~~~~~--~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 154 (164)
T 2l9p_A 80 PYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK---GKTTVTSTST--FPTESAAQQAIDMGVETGMNSTLNQLEKLLN 154 (164)
T ss_dssp TTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCS---SSEEEEEEEE--CSSTTHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCCCccCCCCceEEEEEEEECC---CCEEEEEEEE--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 6666665544332 24432212256677777653 4799888864 4321112334444556666666655555554
Q ss_pred H
Q 001987 973 R 973 (985)
Q Consensus 973 ~ 973 (985)
+
T Consensus 155 ~ 155 (164)
T 2l9p_A 155 Q 155 (164)
T ss_dssp S
T ss_pred H
Confidence 3
No 134
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=49.43 E-value=42 Score=31.61 Aligned_cols=86 Identities=14% Similarity=0.184 Sum_probs=53.6
Q ss_pred cccceeEeeeeEeeeeccccCcceEEEEeccccccccccCCcccccCCCeEEEEEecCCCccccCCCCcCCccccEEEEE
Q 001987 677 GKKGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILWKGRGLDARHGAKSQDEEGRLRFYF 756 (985)
Q Consensus 677 ~~~gr~y~s~~~~~f~snif~~~~~~~i~~~di~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~k~~F 756 (985)
.+.|++|++..-++|...--.....|.+|+..|.+++..++-+. .++-+.+.+..+ -.....+|..|
T Consensus 50 ~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~fg--~s~Ki~l~~~p~-----------~~~~~~~KLsF 116 (145)
T 2cay_A 50 RQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFLT--RSPRLILFFKDP-----------SSSTEFVQLSF 116 (145)
T ss_dssp CSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSSS--SSCEEEEEESSC-----------SSTTCCEEEEE
T ss_pred CCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCccc--cCceEEEEecCC-----------CCCceEEEEEE
Confidence 46699999999999976543333689999999999999887531 123333333221 11224567766
Q ss_pred eeccCcchhhHHHHHHHHhc
Q 001987 757 QSFVSFNDASRTIMALWRSR 776 (985)
Q Consensus 757 ~SF~srd~a~~~i~~~w~~~ 776 (985)
.+ ...++=+..+.++|++.
T Consensus 117 k~-GGa~eF~~~l~~al~~~ 135 (145)
T 2cay_A 117 RK-SDGVLFSQATERALENI 135 (145)
T ss_dssp SS-SCCHHHHHHHHHHHHHH
T ss_pred cC-CCchHHHHHHHHHHHHH
Confidence 64 23355555566666554
No 135
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=48.96 E-value=2.1e+02 Score=28.35 Aligned_cols=142 Identities=8% Similarity=-0.008 Sum_probs=79.9
Q ss_pred eEeeeecCChHHHHhcc-C-CCc-hhHHHH-HHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeec
Q 001987 816 VYNAELPISVKALMEMF-D-GGK-LEHQVM-EKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPL 891 (985)
Q Consensus 816 ~~~~~~p~~~~~~~~lf-~-~s~-f~~~~~-~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~ 891 (985)
.++.+++++++++|.+| . +.+ +..+++ ..-...++. +.| ..+..|.++|. -++..+.+.|. ....
T Consensus 32 ~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdG----g~GsIR~lt~~----~G~~~~~vkEr--le~i 100 (201)
T 2vq5_A 32 HHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDG----GVGTILDMTFV----PGEFPHEYKEK--FILV 100 (201)
T ss_dssp EEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSS----STTCEEEEECC----TTCSSCEEEEE--EEEE
T ss_pred EEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCC----CCCeEEEEEec----CCCcccEEEEE--EEEE
Confidence 35667899999999986 3 443 444555 333444655 766 23778999995 12221233333 3334
Q ss_pred cCCCcEEEEEEEeeCC---CCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeee-hhhhhhchHHHHHHHHHHH
Q 001987 892 ASGEGWIVNEVMSLHD---VPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKF-QQRITQNITEKFTHRLKEM 967 (985)
Q Consensus 892 ~~~~~~vv~~~~~~~d---VPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~-K~~Ie~~~~~g~~~~~~~~ 967 (985)
++.+...--+... .| -||-+ ......+.+.++ ++|. |.|.++|.+..-. .-.-+. ..++.+..+
T Consensus 101 Dde~~~~sYsiie-Gd~l~~~~~~---y~~tikv~p~~d--ggs~--vkWt~~ye~~~~~~~~~e~~----~~~~~~~~~ 168 (201)
T 2vq5_A 101 DNEHRLKKVQMIE-GGYLDLGVTY---YMDTIHVVPTGK--DSCV--IKSSTEYHVKPEFVKIVEPL----ITTGPLAAM 168 (201)
T ss_dssp ETTTTEEEEEEEE-EGGGGTTEEE---EEEEEEEEEEET--TEEE--EEEEEEEEECGGGHHHHTTT----CCSHHHHHH
T ss_pred chhhCEEEEEEEe-cCccccceeE---EEEEEEEEECCC--CCeE--EEEEEEEEECCCCCCCChhH----HHHHHHHHH
Confidence 4444332222222 23 24544 334445555544 5664 7888888864322 111111 347788888
Q ss_pred HHHHHHHHhhccc
Q 001987 968 IELVEREILFATQ 980 (985)
Q Consensus 968 ~~~~~~~i~~~~~ 980 (985)
++.+++|+..+..
T Consensus 169 ~KaiE~yLlanp~ 181 (201)
T 2vq5_A 169 ADAISKLVLEHKS 181 (201)
T ss_dssp HHHHHHHHHSCCC
T ss_pred HHHHHHHHHhCcc
Confidence 9999999877653
No 136
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=47.19 E-value=1.9e+02 Score=27.20 Aligned_cols=63 Identities=8% Similarity=0.048 Sum_probs=41.4
Q ss_pred CCe-EEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHHHhh
Q 001987 911 DDH-FRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVEREILF 977 (985)
Q Consensus 911 gd~-F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~i~~ 977 (985)
|+- =+...+|.+++.++ ++|+|......++.. .+-+++++-+-.-+.+.++.|++...+.++.
T Consensus 88 g~~~~~l~g~w~f~p~~~--g~t~V~~~~~~e~~~--pl~~ll~~~~~~~~~~~~~~~v~af~~ra~~ 151 (161)
T 3p9v_A 88 GEGNGVVSGSWTLSAKGD--NATAVKFQTSAELTV--PLPSLLKLAISPVIKHEFNSLVDTYMANLKK 151 (161)
T ss_dssp TSTTEEEEEEEEEEESSS--SCEEEEEEEEEEEEE--CSCGGGHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccceeEEEEEEEEECCC--CeEEEEEEEEEEEcC--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 25678999999887 788887777777753 3444445444455566677777777666543
No 137
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=45.61 E-value=1.2e+02 Score=30.31 Aligned_cols=110 Identities=5% Similarity=-0.137 Sum_probs=57.1
Q ss_pred cceeEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEEcccccCC--CCceeEEEEEEeccccCCCceeeeeEEEEee
Q 001987 813 MSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVK--PGVCERHLSYRFNRHVSIFGGEVTCTQQKSP 890 (985)
Q Consensus 813 ~~~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~--~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~ 890 (985)
...+...++++++++++.++.+..-...+.. .+....+...+ .-+.+|.++|.- +.+.+.+.| +...
T Consensus 50 c~~~v~~~I~ApadkVW~lv~dF~~l~~w~p-----~V~s~e~~eGd~g~vGsVR~lt~~~----G~p~~~vkE--rL~~ 118 (211)
T 3k3k_A 50 CSSLHAQRIHAPPELVWSIVRRFDKPQTYKH-----FIKSCSVEQNFEMRVGCTRDVIVIS----GLPANTSTE--RLDI 118 (211)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCTTCGGGTCS-----SEEEEECCTTCCCCTTCEEEEEESS----SSSCEEEEE--EEEE
T ss_pred EeEEEEEEEcCCHHHHHHHHhCcCChhHcCc-----cceEEEEecCCCCCCCcEEEEEecC----CCccceEEE--EEEE
Confidence 3445566799999999998732211111111 23333332221 227889999841 111123333 3443
Q ss_pred ccCCC-cEEEEEEEeeCCCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEe
Q 001987 891 LASGE-GWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLK 944 (985)
Q Consensus 891 ~~~~~-~~vv~~~~~~~dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k 944 (985)
.++.+ .|.... .-.|.||.+|-. ...+.+... .+ |.|.+.|.+
T Consensus 119 lDd~~~~~sYsI--ieg~lpv~~Y~s---ti~V~p~~~--gg----V~Wt~~fes 162 (211)
T 3k3k_A 119 LDDERRVTGFSI--IGGEHRLTNYKS---VTTVHRFEK--EN----RIWTVVLES 162 (211)
T ss_dssp EETTTTEEEEEE--EEETTGGGTCEE---EEEEEEEEE--TT----EEEEEEEEE
T ss_pred EeccCCEEEEEE--eecCcceeEEEE---EEEEEECCC--CC----EEEEEEEEE
Confidence 44443 322111 123789988753 345555555 22 889999973
No 138
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=44.14 E-value=87 Score=32.16 Aligned_cols=150 Identities=8% Similarity=0.048 Sum_probs=73.7
Q ss_pred eeec-CChHHHHhccCCCchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEE-Eeec----c
Q 001987 819 AELP-ISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQ-KSPL----A 892 (985)
Q Consensus 819 ~~~p-~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~-~~~~----~ 892 (985)
.+++ ++++.++++|.+............ +..+=.- -+.+ . .+.|...+...|...+=..... .... .
T Consensus 79 ~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~--~~~vle~--i~~~--~-~i~y~~~~~p~p~s~RDfV~~r~~~~~~~~~~ 151 (255)
T 2e3n_A 79 HAVKGVTGHEVCNYFWNVDVRNDWETTIE--NFHVVET--LADN--A-IIIYQTHKRVWPASQRDVLYLSVIRKIPALTE 151 (255)
T ss_dssp EEEETCCHHHHHHHHHCGGGHHHHCCSEE--EEEEEEE--EETT--E-EEEEEEECCCTTSCCEEEEEEEEEEEECCSST
T ss_pred EEEcCCCHHHHHHHHhCcchHhhhhhhcc--eeEEEEE--cCCC--C-EEEEEEeecCCCcCCceeEEEEEEEecccccc
Confidence 3454 889999998755444444332221 2221111 0111 2 4455432333444333322222 2222 3
Q ss_pred CC--CcEEEEEEEeeCCCCCC-CeEEEEE---EEE---EEec-CC-----CCCccEEEEEEEEEEEeeeeehhhhhhchH
Q 001987 893 SG--EGWIVNEVMSLHDVPFD-DHFRVHF---RYE---IEKS-PL-----AHNACKCAIYIGISWLKSTKFQQRITQNIT 957 (985)
Q Consensus 893 ~~--~~~vv~~~~~~~dVPyg-d~F~v~~---ry~---i~~~-~~-----~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~ 957 (985)
+| ..+++..++.-+++|=- ++=+++. .+| +.+. +. ++++|++.....+...++ +=+.++.+.+.
T Consensus 152 ~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~ 230 (255)
T 2e3n_A 152 NDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGW-APASVLRAVAK 230 (255)
T ss_dssp TSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEEEEEECSSC-CCHHHHHHHHH
T ss_pred CCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEEEEeCCCCc-cCHHHHHHHHh
Confidence 33 45556667776778765 4455552 222 3322 11 236899888888888752 22445555555
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 001987 958 EKFTHRLKEMIELVEREIL 976 (985)
Q Consensus 958 ~g~~~~~~~~~~~~~~~i~ 976 (985)
.+.-..++.|-+.+++..+
T Consensus 231 ~~~~~~l~~L~k~v~~~~~ 249 (255)
T 2e3n_A 231 REYPKFLKRFTSYVQEKTA 249 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHhcc
Confidence 5555666665555554443
No 139
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=41.07 E-value=2.2e+02 Score=26.30 Aligned_cols=130 Identities=9% Similarity=0.064 Sum_probs=67.3
Q ss_pred eeeecCChHHHHhccCCC-chhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC-CC
Q 001987 818 NAELPISVKALMEMFDGG-KLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS-GE 895 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf~~s-~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~-~~ 895 (985)
+.++++++++++.++.+- ++ .++.-. +....+.. |+..|.++|. -+ +.+.| +....++ +.
T Consensus 7 si~I~Ap~~~VW~~l~d~~~~-~~w~p~-----v~~~~~~~---GG~vR~~~~~----~G---~~~~E--rl~~~D~~~~ 68 (146)
T 3f08_A 7 SMEIFGSTEQVWQLIGGFNSL-PDWLPY-----IPSSKLTE---GGRVRHLANP----DG---ETIIE--RLEVFNDKER 68 (146)
T ss_dssp EEEESSCHHHHHHHHCSTTCH-HHHCTT-----CCEEEEEG---GGTEEEEECT----TS---CEEEE--EEEEEETTTT
T ss_pred EEEEeCCHHHHHHHHhccccH-HHhCCC-----eEEEEEeC---CCeEEEEEeC----CC---CEEEE--EEEEEeCCCC
Confidence 557899999999987433 33 333221 11122221 3678887762 11 12333 3333333 33
Q ss_pred cEEEEEEEeeCCCCCCCeEEEEEEEEEEe-cCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHH
Q 001987 896 GWIVNEVMSLHDVPFDDHFRVHFRYEIEK-SPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 974 (985)
Q Consensus 896 ~~vv~~~~~~~dVPygd~F~v~~ry~i~~-~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~ 974 (985)
.+... .+. .+.|+.+ ....|.+.+ .+. ++|++ .|...|.- -+.-...+...++..|+.-++.|++.
T Consensus 69 ~~~y~-iv~-g~~~~~~---~~~~~~v~p~~~~--~gt~v--~w~~~~~p----~g~~~~~~~~~~~~~~~~~L~~Lk~~ 135 (146)
T 3f08_A 69 YYTYS-IMN-APFPVTN---YLSTIQVKEGTES--NTSLV--EWSGTFTP----VAVSDEEAINLVHGIYSDGLKALQHA 135 (146)
T ss_dssp EEEEE-EEE-CSSSEEE---EEEEEEEEECSST--TCEEE--EEEEEEEE----SSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE-Eec-CCCceeE---EEEEEEEEEecCC--CcEEE--EEEEEEEe----CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222 222 3677543 455677777 344 67765 45555552 33333344555566677777777776
Q ss_pred Hhhc
Q 001987 975 ILFA 978 (985)
Q Consensus 975 i~~~ 978 (985)
+...
T Consensus 136 ~e~~ 139 (146)
T 3f08_A 136 FLDL 139 (146)
T ss_dssp TTC-
T ss_pred Hhhh
Confidence 6543
No 140
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=39.73 E-value=2e+02 Score=25.42 Aligned_cols=57 Identities=5% Similarity=0.086 Sum_probs=34.8
Q ss_pred EEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHHHHhh
Q 001987 917 HFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVEREILF 977 (985)
Q Consensus 917 ~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~~i~~ 977 (985)
...|.+++.++ . |+|.......+.. .++..++..-...-++..++++++.|++.+..
T Consensus 88 ~~~~~~~~~~~--g-T~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 88 EGTWVFLPEGE--G-TRVVLTLTYELTI-PIFGGLLRKLVQKLMQENVESLLKGLEERVLA 144 (147)
T ss_dssp EEEEEEEECSS--S-EEEEEEEEEECCC-TTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCC--C-cEEEEEEEEecCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788888766 4 8777666665532 34455554434344456677777777766644
No 141
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=38.91 E-value=2.6e+02 Score=26.48 Aligned_cols=145 Identities=11% Similarity=0.058 Sum_probs=70.9
Q ss_pred eeEeeeecCChHHHHhccCCCchhHHHHHHcCCc-ceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 815 KVYNAELPISVKALMEMFDGGKLEHQVMEKSGCH-NYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 815 ~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~-~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
-.+...|+++++.+|..|++.....+..--.+.+ .....++ ..|+. +.|+...+-+ ......-+......
T Consensus 18 i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~---~~Gg~---~~~~~~~~~G---~~~~~~g~v~e~~p 88 (175)
T 2lf2_A 18 ITIKREFAAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMDF---KEGGT---WLYAMVGPNG---EEHWSICEYAIIKP 88 (175)
T ss_dssp EEEEEEESSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEECC---STTCE---EEEEEECSSS---CEEEEEEEECCCCS
T ss_pred EEEEEEEcCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEec---cCCCE---EEEEEECCCC---CEEEeEEEEEEEcC
Confidence 4567789999999999997765433332111211 0111122 24443 3333222211 12222212233445
Q ss_pred CCcEEEEEEEeeC-CCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLH-DVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 972 (985)
Q Consensus 894 ~~~~vv~~~~~~~-dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~ 972 (985)
.+.++..-...-. +.|-++-......|.|+..+. .|+|.+... |...-.....++.|...|....+..|..+|+
T Consensus 89 ~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~---gT~l~~~~~--~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 163 (175)
T 2lf2_A 89 IERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKGE---ITEVQYHIS--YDDVAQLEATIQMGFKEGITMAMENLDELLV 163 (175)
T ss_dssp SSEEEEEEEEESSTTCCCTTSCCEEEEEEEEEETT---EEEEEEEEE--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCCCcCCCCCcEEEEEEEEECCC---CEEEEEEEe--cCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 5666655543321 244322123567788887654 799888754 3211122334444555666666665555554
Q ss_pred H
Q 001987 973 R 973 (985)
Q Consensus 973 ~ 973 (985)
.
T Consensus 164 ~ 164 (175)
T 2lf2_A 164 S 164 (175)
T ss_dssp H
T ss_pred h
Confidence 3
No 142
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=36.38 E-value=2.8e+02 Score=26.14 Aligned_cols=134 Identities=10% Similarity=0.014 Sum_probs=70.0
Q ss_pred eeeecCChHHHHhccCC-CchhHHHHHHcCCcceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccCCCc
Q 001987 818 NAELPISVKALMEMFDG-GKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEG 896 (985)
Q Consensus 818 ~~~~p~~~~~~~~lf~~-s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~~~~ 896 (985)
+.+++++++++|.++.+ .++ ...-....+.++..+.+ ....+.+|.+ + +.+.| +....++.+.
T Consensus 7 si~I~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~--~~~vGsvR~~----g-------g~v~E--rl~~~D~~~~ 70 (160)
T 3p51_A 7 SIVVDAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGG--GYSVGARRLL----N-------GEFLD--TLIAYSEIER 70 (160)
T ss_dssp EEEESSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCC--TTCTTCEEEE----T-------TTEEE--EEEEEETTTT
T ss_pred EEEECCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCC--CCCCCCEEEE----C-------CEEEE--EEEEEcCCCc
Confidence 55789999999998743 334 22222333324433332 1223667876 1 13333 3333333332
Q ss_pred EEEEEEEeeCCCCC-CC-eEEEEEEEEEEecC-CCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHHH
Q 001987 897 WIVNEVMSLHDVPF-DD-HFRVHFRYEIEKSP-LAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVER 973 (985)
Q Consensus 897 ~vv~~~~~~~dVPy-gd-~F~v~~ry~i~~~~-~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~~ 973 (985)
.+--+.+. .+.|- |+ .=.....|.+.+.+ . ++|+ |.|...|.... .-+...++..|+..++.|++
T Consensus 71 ~~sY~ii~-g~l~~~~~~~~~y~~~~~v~p~~~~--ggt~--V~w~~~~~~~~-------~~~~~~~~~~~~~~L~~Lk~ 138 (160)
T 3p51_A 71 RIMYSMDE-GPSPVSSGEIYNYVGNLHLLPVTID--DTTF--VEWSGSWESAS-------TEAVEYMNTVYRSLLADLAA 138 (160)
T ss_dssp EEEEEEEE-CSTTSSTTTEEEEEEEEEEEEETTT--TEEE--EEEEEEEEESC-------SHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEec-CCCcccccceeEEEEEEEEEEecCC--CCEE--EEEEEEEEeCH-------HHHHHHHHHHHHHHHHHHHH
Confidence 22222222 35661 11 22366778888775 4 5665 55666776642 13444556677777777777
Q ss_pred HHhhcc
Q 001987 974 EILFAT 979 (985)
Q Consensus 974 ~i~~~~ 979 (985)
.+...+
T Consensus 139 ~~e~~~ 144 (160)
T 3p51_A 139 EFTSES 144 (160)
T ss_dssp HSCTTT
T ss_pred HHhhcc
Confidence 765443
No 143
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=24.71 E-value=3.9e+02 Score=25.13 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=17.3
Q ss_pred eeEeeeecCChHHHHhccCCCc
Q 001987 815 KVYNAELPISVKALMEMFDGGK 836 (985)
Q Consensus 815 ~~~~~~~p~~~~~~~~lf~~s~ 836 (985)
-.++..|+++++.+|..+.+..
T Consensus 12 i~~~r~i~Ap~e~Vw~altdp~ 33 (178)
T 1xfs_A 12 LMLKRELAVPVNLVWRGLTEPE 33 (178)
T ss_dssp EEEEEEESSCHHHHHHHHHCHH
T ss_pred EEEEEEecCCHHHHHHHhCCHH
Confidence 3456689999999999886544
No 144
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=24.42 E-value=5e+02 Score=25.33 Aligned_cols=104 Identities=7% Similarity=-0.153 Sum_probs=51.7
Q ss_pred ceeEeeeecCChHHHHhccCCCchhHHHHHHcCCcceEE-cccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeecc
Q 001987 814 SKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVT-TPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLA 892 (985)
Q Consensus 814 ~~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~~~~~-~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~ 892 (985)
.-++..++++++++++.++-+.+-.+.....-....+.. +.+.....-+.+|.++|.-.. |. + +.+++....+
T Consensus 31 ~s~~~~~I~Ap~d~VWalVrdF~~p~~w~p~V~s~~~~e~Gdg~~~~~vGsVR~ltl~~G~---P~-~--~i~ErL~~lD 104 (189)
T 3oji_A 31 TSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVSGL---PA-S--TSVEILEVLD 104 (189)
T ss_dssp EEEEEEEESSCHHHHHHHHSCTTCGGGTCTTEEEEEECCC----CCCSTTCEEEEEECSSS---SB-S--EEEEEEEEEE
T ss_pred ceeEEEEEcCCHHHHHHHHhCCCChhhCccccceEEEEecCCCCccCCCCcEEEEEecCCC---cC-c--eEEEEEEEEe
Confidence 345566889999999998632221222211111112222 333211224788999995211 21 2 3344444444
Q ss_pred CCCcEEEEEEEeeCCCCCCCeEEEEEEEEEEe
Q 001987 893 SGEGWIVNEVMSLHDVPFDDHFRVHFRYEIEK 924 (985)
Q Consensus 893 ~~~~~vv~~~~~~~dVPygd~F~v~~ry~i~~ 924 (985)
+.+.. +--+..-.|.|..||-.+...--+..
T Consensus 105 de~~~-~sY~Iieg~~pv~nY~StitV~~~~~ 135 (189)
T 3oji_A 105 EEKRI-LSFRVLGGEHRLNNYRSVTSVNEFVV 135 (189)
T ss_dssp TTTTE-EEEEEEECSBSSCSCEEEEEEEEEEE
T ss_pred ccCCE-EEEEEEecCCccccEEEEEEEEeccc
Confidence 44432 22222236899999998875554443
No 145
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=22.38 E-value=4.7e+02 Score=24.29 Aligned_cols=144 Identities=12% Similarity=0.112 Sum_probs=67.9
Q ss_pred eeEeeeecCChHHHHhccCCCchhHHHHHHcCCc-ceEEcccccCCCCceeEEEEEEeccccCCCceeeeeEEEEeeccC
Q 001987 815 KVYNAELPISVKALMEMFDGGKLEHQVMEKSGCH-NYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 893 (985)
Q Consensus 815 ~~~~~~~p~~~~~~~~lf~~s~f~~~~~~~~~~~-~~~~~~W~~~~~~~~~R~~sy~~~~~~~~~~~~~~~~q~~~~~~~ 893 (985)
-.+...|+++++.+|..|++.....+..--.+.+ .....++ ..|+. +.|+...+-+ .......+......
T Consensus 14 i~~~~~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~---~~Gg~---~~~~~~~~~g---~~~~~~~~v~e~~p 84 (172)
T 2ldk_A 14 FSIVAEFDADVKRVWAIWEDPRQLERWWGPPTWPATFETHEF---TVGGK---AAYYMTGPDG---TKARGWWQFTTIEA 84 (172)
T ss_dssp EEEEEEESSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEECC---STTCE---EEEEEECTTS---CEEEEEEEEEEECS
T ss_pred EEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCcccceEEEee---cCCCE---EEEEEECCCC---CEEeeEEEEEEEcC
Confidence 4567789999999999996654322221111110 1111122 24443 3343222211 12222222333445
Q ss_pred CCcEEEEEEEeeC-CCCCCCeEEEEEEEEEEecCCCCCccEEEEEEEEEEEeeeeehhhhhhchHHHHHHHHHHHHHHHH
Q 001987 894 GEGWIVNEVMSLH-DVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 972 (985)
Q Consensus 894 ~~~~vv~~~~~~~-dVPygd~F~v~~ry~i~~~~~~~~~~~l~v~~~v~~~k~t~~K~~Ie~~~~~g~~~~~~~~~~~~~ 972 (985)
.+.++..-...-+ +.|-++-......|.|+..+. .|+|.+... |...-....++..+ ..+-+...++.|+
T Consensus 85 ~~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~~---gT~lt~~~~--~~~~~~~~~~~~~~----~~~Gw~~~L~~L~ 155 (172)
T 2ldk_A 85 PDHLEFDDGFADEHGAPVDELGVTHATVKLEPLEN---RTRMTIIST--FESEEQMQKMAEMG----MEEGMREAIEQID 155 (172)
T ss_dssp SSEEEEEEEEBCSSCCBCTTTCEEEEEEEEEEETT---EEEEEEEEE--ESCHHHHHHHHHHT----HHHHHHHHHHHHH
T ss_pred CCEEEEEEeecCCCCCccCCCccEEEEEEEEEcCC---CEEEEEEEE--cCCHHHHHHHHHhh----HHHHHHHHHHHHH
Confidence 5666665543322 244322124667888887654 788887754 32111112233333 4445555556666
Q ss_pred HHHh
Q 001987 973 REIL 976 (985)
Q Consensus 973 ~~i~ 976 (985)
+++.
T Consensus 156 ~~le 159 (172)
T 2ldk_A 156 AVLS 159 (172)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6554
Done!