BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001988
(985 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 317/634 (50%), Gaps = 42/634 (6%)
Query: 50 LGTNWTSNASICSWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKL 109
L N S A++ W+ + D ++ L +S + G + +++ +L+ LD+S N
Sbjct: 155 LSANSISGANVVGWV--LSD-GCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNF 209
Query: 110 SSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHL 169
S+ IP + S L+ L + N+LSG S + + + +S N+ G +P L
Sbjct: 210 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PL 265
Query: 170 RYLKHLFLRENMFYGKIPSSLS-KCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINN 228
+ L++L L EN F G+IP LS C L L L N+ GA+P G+ ++L+ ++L +N
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 325
Query: 229 KLHGEIPQE-IGYLQNLDVLQLGFNNLTGVVPATIFNMS-TLKEIFLYNNSLSGS-LPSR 285
GE+P + + ++ L VL L FN +G +P ++ N+S +L + L +N+ SG LP+
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 385
Query: 286 IDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFD 345
L+ L L N F+G IP +++N S+L+ L + N SG IPS++G+L L+
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 346 IFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNI 405
++ N L P+ L K L L L N L G +PS + N + +L ++++ +
Sbjct: 446 LWLNMLEGEIPQ-----ELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRL 499
Query: 406 SGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLS 465
+G IPK IG L NL +L L N+ SG+IP G + L LDL N G+IP + S
Sbjct: 500 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 559
Query: 466 -RLNELDLNGNKI-----SGSISSCLGNLTSLQYLNLGS---NRFTFVIPSTFWNLKDIL 516
++ + G + G C G L++ + S NR + P
Sbjct: 560 GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC--------- 610
Query: 517 SFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGP 576
+I+S + G S N +++ +D+S N LSG IP + + L ++L +N + G
Sbjct: 611 --NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 668
Query: 577 IPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTA 636
IP+ G++ L LDLS+NK+ G IP + L+ L E++LS N L G IP G F F
Sbjct: 669 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 728
Query: 637 ESFMGNELLCGLPNLQVPPCKHSQPRAQHKSKKT 670
F+ N LCG P +P C S +++
Sbjct: 729 AKFLNNPGLCGYP---LPRCDPSNADGYAHHQRS 759
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 201/687 (29%), Positives = 310/687 (45%), Gaps = 99/687 (14%)
Query: 22 TVAASNISTDQQALLALKDHITYDPTNLLGTNWTSNASICSWIGIICDVNSHKVTTLNLS 81
+ + ++ + L++ KD + P L +W+SN + C++ G+ C KVT+++LS
Sbjct: 1 AMGSQSLYREIHQLISFKDVL---PDKNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLS 55
Query: 82 S-----------------------FNLQGTIPPEIANL---SSLKSLDLSHNKLSSNIPS 115
S F I ++ +SL SLDLS N LS + +
Sbjct: 56 SKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTT 115
Query: 116 --SIFTMSTLKVLYLMDNQLS--GSLSS-FTFNTSSILDIRLSKNKLSGK--LPENICNH 168
S+ + S LK L + N L G +S N+ +LD LS N +SG + + +
Sbjct: 116 LTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD--LSANSISGANVVGWVLSDG 173
Query: 169 LRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINN 228
LKHL + N G + +S+C L+ L + NN S IP +G+ + LQ + + N
Sbjct: 174 CGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 230
Query: 229 KLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDL 288
KL G+ + I L +L + N G +P + +L+ + L N +G +P +
Sbjct: 231 KLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSG 288
Query: 289 ALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIP-SAIGNLRNLKLFDIF 347
A L L+L N F G +P + S L L + SN+FSG +P + +R LK+ D+
Sbjct: 289 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLS 348
Query: 348 FNNLTSSTPELGFLSSLAN-CKKLRYLGLGGNPLDG-FLPSSIGNLSLSLERLNIAFCNI 405
FN + PE SL N L L L N G LP+ N +L+ L +
Sbjct: 349 FNEFSGELPE-----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 403
Query: 406 SGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLS 465
+G IP + N S L+ L L N LSG+IP + G L KL+ L L N L G IP E+ +
Sbjct: 404 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 463
Query: 466 RLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL 525
L L L+ N ++G I S L N T+L +++L +NR T IP L+++ +S+N
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Query: 526 DGPISLAIGNLKAVVGIDLSRNNLSGNIPTTL----------------------EGLK-- 561
G I +G+ ++++ +DL+ N +G IP + +G+K
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 583
Query: 562 --------SLQNI-SLAYNRLE-------------GPIPESFGNMTSLESLDLSNNKISG 599
Q I S NRL G +F N S+ LD+S N +SG
Sbjct: 584 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 643
Query: 600 SIPVSFEKLSYLKELNLSFNKLKGEIP 626
IP + YL LNL N + G IP
Sbjct: 644 YIPKEIGSMPYLFILNLGHNDISGSIP 670
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 314/623 (50%), Gaps = 42/623 (6%)
Query: 50 LGTNWTSNASICSWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKL 109
L N S A++ W+ + D ++ L +S + G + +++ +L+ LD+S N
Sbjct: 158 LSANSISGANVVGWV--LSD-GCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNF 212
Query: 110 SSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHL 169
S+ IP + S L+ L + N+LSG S + + + +S N+ G +P L
Sbjct: 213 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PL 268
Query: 170 RYLKHLFLRENMFYGKIPSSLS-KCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINN 228
+ L++L L EN F G+IP LS C L L L N+ GA+P G+ ++L+ ++L +N
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328
Query: 229 KLHGEIPQE-IGYLQNLDVLQLGFNNLTGVVPATIFNMS-TLKEIFLYNNSLSGS-LPSR 285
GE+P + + ++ L VL L FN +G +P ++ N+S +L + L +N+ SG LP+
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388
Query: 286 IDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFD 345
L+ L L N F+G IP +++N S+L+ L + N SG IPS++G+L L+
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 346 IFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNI 405
++ N L P+ L K L L L N L G +PS + N + +L ++++ +
Sbjct: 449 LWLNMLEGEIPQ-----ELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRL 502
Query: 406 SGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLS 465
+G IPK IG L NL +L L N+ SG+IP G + L LDL N G+IP + S
Sbjct: 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562
Query: 466 -RLNELDLNGNKI-----SGSISSCLGNLTSLQYLNLGS---NRFTFVIPSTFWNLKDIL 516
++ + G + G C G L++ + S NR + P
Sbjct: 563 GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC--------- 613
Query: 517 SFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGP 576
+I+S + G S N +++ +D+S N LSG IP + + L ++L +N + G
Sbjct: 614 --NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 671
Query: 577 IPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTA 636
IP+ G++ L LDLS+NK+ G IP + L+ L E++LS N L G IP G F F
Sbjct: 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 731
Query: 637 ESFMGNELLCGLPNLQVPPCKHS 659
F+ N LCG P +P C S
Sbjct: 732 AKFLNNPGLCGYP---LPRCDPS 751
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 201/676 (29%), Positives = 305/676 (45%), Gaps = 99/676 (14%)
Query: 33 QALLALKDHITYDPTNLLGTNWTSNASICSWIGIICDVNSHKVTTLNLSS---------- 82
L++ KD + P L +W+SN + C++ G+ C KVT+++LSS
Sbjct: 15 HQLISFKDVL---PDKNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAV 69
Query: 83 -------------FNLQGTIPPEIANL---SSLKSLDLSHNKLSSNIPS--SIFTMSTLK 124
F I ++ +SL SLDLS N LS + + S+ + S LK
Sbjct: 70 SSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 129
Query: 125 VLYLMDNQLS--GSLSS-FTFNTSSILDIRLSKNKLSGK--LPENICNHLRYLKHLFLRE 179
L + N L G +S N+ +LD LS N +SG + + + LKHL +
Sbjct: 130 FLNVSSNTLDFPGKVSGGLKLNSLEVLD--LSANSISGANVVGWVLSDGCGELKHLAISG 187
Query: 180 NMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIG 239
N G + +S+C L+ L + NN S IP +G+ + LQ + + NKL G+ + I
Sbjct: 188 NKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAIS 244
Query: 240 YLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLG 299
L +L + N G +P + +L+ + L N +G +P + A L L+L
Sbjct: 245 TCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS 302
Query: 300 INSFSGTIPSSITNASKLILLEMGSNSFSGFIP-SAIGNLRNLKLFDIFFNNLTSSTPEL 358
N F G +P + S L L + SN+FSG +P + +R LK+ D+ FN + PE
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE- 361
Query: 359 GFLSSLAN-CKKLRYLGLGGNPLDG-FLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNL 416
SL N L L L N G LP+ N +L+ L + +G IP + N
Sbjct: 362 ----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417
Query: 417 SNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNK 476
S L+ L L N LSG+IP + G L KL+ L L N L G IP E+ + L L L+ N
Sbjct: 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNL 536
++G I S L N T+L +++L +NR T IP L+++ +S+N G I +G+
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 537 KAVVGIDLSRNNLSGNIPTTL----------------------EGLK----------SLQ 564
++++ +DL+ N +G IP + +G+K Q
Sbjct: 538 RSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597
Query: 565 NI-SLAYNRLE-------------GPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSY 610
I S NRL G +F N S+ LD+S N +SG IP + Y
Sbjct: 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657
Query: 611 LKELNLSFNKLKGEIP 626
L LNL N + G IP
Sbjct: 658 LFILNLGHNDISGSIP 673
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 712 TIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLK-SFE 770
++RFS EL A+DNF+ NI+G GGFG VY+ RL DG +A+K + + F+
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 771 AECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLH---SSNCALNIFCRLN 827
E E+I HRNL+++ C + LV YM+NGS+ CL S L+ R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 828 IMIDIASALEYLHFGHSTP-IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
I + A L YLH H P IIH D+K +N+LLDE+ A + DFG+AKL+ +D
Sbjct: 144 IALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 887 QTLATIGYMAPDEIFVGELSLK 908
TIG++AP+ + G+ S K
Sbjct: 203 -VRGTIGHIAPEYLSTGKSSEK 223
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 143/276 (51%), Gaps = 34/276 (12%)
Query: 384 LPSSIGNLSLSLERLNIA-FCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQK 442
+PSS+ NL L L I N+ G IP AI L+ L L + N+SG+IP ++
Sbjct: 68 IPSSLANLPY-LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 443 LQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSL-QYLNLGSNRF 501
L LD ++N L+G++P I L L + +GN+ISG+I G+ + L + + NR
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 502 TFVIPSTFWNLKDILSF-DISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGL 560
T IP TF NL L+F D+S N+L+G S+ G+ K I L++N+L+ +
Sbjct: 187 TGKIPPTFANLN--LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD-------- 236
Query: 561 KSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNK 620
L + L+ N L LDL NN+I G++P +L +L LN+SFN
Sbjct: 237 --LGKVGLSKN---------------LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 621 LKGEIPRGGPFANFTAESFMGNELLCGLPNLQVPPC 656
L GEIP+GG F ++ N+ LCG P +P C
Sbjct: 280 LCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 58/283 (20%)
Query: 31 DQQALLALKDHITYDPTNLLGTNWTSNASIC--SWIGIICDVNS--HKVTTLNLSSFNLQ 86
D+QALL +K + +PT L ++W C +W+G++CD ++ ++V L+LS NL
Sbjct: 7 DKQALLQIKKDLG-NPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 87 ---------------------------GTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFT 119
G IPP IA L+ L L ++H +S IP +
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 120 MSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRE 179
+ TL L N LSG+L + +++ I N++SG +P++ + + + +
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 180 NMFYGKIPSSLSKC-----------------------KQLQELHLGYNNLSGAIPKEIGN 216
N GKIP + + K Q++HL N+L+ + K +G
Sbjct: 184 NRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGL 242
Query: 217 LTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
L + L NN+++G +PQ + L+ L L + FNNL G +P
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 10/243 (4%)
Query: 186 IPSSLSKCKQLQELHLG-YNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNL 244
IPSSL+ L L++G NNL G IP I LT L + + + + G IP + ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 245 DVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFS 304
L +N L+G +P +I ++ L I N +SG++P + + N +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 305 GTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSL 364
G IP + N + L +++ N G G+ +N + + N+L ++G
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGL---- 242
Query: 365 ANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSL 424
K L L L N + G LP + L L LN++F N+ G IP+ GNL V +
Sbjct: 243 --SKNLNGLDLRNNRIYGTLPQGLTQLKF-LHSLNVSFNNLCGEIPQG-GNLQRFDVSAY 298
Query: 425 GGN 427
N
Sbjct: 299 ANN 301
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 125 bits (313), Expect = 1e-28, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 144/307 (46%), Gaps = 48/307 (15%)
Query: 713 IRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLK-SFEA 771
++RFS EL A+DNF NI+G GGFG VY+ RL DG +A+K + + F+
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLH---SSNCALNIFCRLNI 828
E E+I HRNL+++ C + LV YM+NGS+ CL S L+ R I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 829 MIDIASALEYLHFGHSTP-IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+ A L YLH H P IIH D+K +N+LLDE+ A + DFG+AKL+ +D
Sbjct: 137 ALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 888 TLATIGYMAPDEIFVGELSLKR----------------------------------WVND 913
IG++AP+ + G+ S K WV
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 914 LLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973
LL +E + L G K++ + + +AL CT SP +R + + R+L+
Sbjct: 255 LLKEKKLEALVDVDLQGN-----YKDEEVEQLIQVALLCTQSSPMERPKMSE-VVRMLE- 307
Query: 974 RDTLSKR 980
D L++R
Sbjct: 308 GDGLAER 314
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 715 RFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECE 774
R +L AT+NF +IG G FG VY+ L DG ++A+K P+ + ++ FE E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN---CALNIFCRLNIMID 831
+ RH +LV +I C + L+ +YM NG+L+ L+ S+ +++ RL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
A L YL H+ IIH D+K N+LLDE+ V ++DFG++K + D++ + T
Sbjct: 148 AARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 892 IGYMAPDEIFVGELSLK 908
+GY+ P+ G L+ K
Sbjct: 205 LGYIDPEYFIKGRLTEK 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 715 RFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECE 774
R +L AT+NF +IG G FG VY+ L DG ++A+K P+ + ++ FE E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN---CALNIFCRLNIMID 831
+ RH +LV +I C + L+ +YM NG+L+ L+ S+ +++ RL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
A L YL H+ IIH D+K N+LLDE+ V ++DFG++K + ++ + T
Sbjct: 148 AARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 892 IGYMAPDEIFVGELSLK 908
+GY+ P+ G L+ K
Sbjct: 205 LGYIDPEYFIKGRLTEK 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 19/213 (8%)
Query: 709 SQPTIRRFSYFELLRATDNFAEN------NIIGIGGFGSVYRARLEDGVEIAIKVFHPQC 762
S FS++EL T+NF E N +G GGFG VY+ + + +A+K
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV 66
Query: 763 ASTL----KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLED---CLHS 815
T + F+ E +V+ +H NLV+++ S+ D LV YM NGSL D CL
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 816 SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875
+ L+ R I A+ + +LH H IH D+K +N+LLDE A +SDFG+A+
Sbjct: 127 TP-PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
++ M ++ + T YMAP E GE++ K
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAP-EALRGEITPK 214
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 709 SQPTIRRFSYFELLRATDNFAEN------NIIGIGGFGSVYRARLEDGVEIAIKVFHPQC 762
S FS++EL T+NF E N +G GGFG VY+ + + +A+K
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV 66
Query: 763 ASTL----KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLED---CLHS 815
T + F+ E +V+ +H NLV+++ S+ D LV YM NGSL D CL
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 816 SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875
+ L+ R I A+ + +LH H IH D+K +N+LLDE A +SDFG+A+
Sbjct: 127 TP-PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
++ M + + T YMAP E GE++ K
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAP-EALRGEITPK 214
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (248), Expect = 5e-21, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 709 SQPTIRRFSYFELLRATDNFAEN------NIIGIGGFGSVYRARLEDGVEIAIKVFHPQC 762
S FS++EL T+NF E N +G GGFG VY+ + + +A+K
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 60
Query: 763 ASTL----KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLED---CLHS 815
T + F+ E +V+ +H NLV+++ S+ D LV YM NGSL D CL
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 816 SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875
+ L+ R I A+ + +LH H IH D+K +N+LLDE A +SDFG+A+
Sbjct: 121 TP-PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
+ M + + T YMAP E GE++ K
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAP-EALRGEITPK 208
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + RL ++D IAS + Y+ +H
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 386
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 505
Query: 958 EKR 960
E+R
Sbjct: 506 EER 508
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 19/240 (7%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY-LHFGHSTPIIHCDL 852
+ +V EYMS GSL D L + RL ++D+A+ + + + +H DL
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--W 910
+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K W
Sbjct: 307 RAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 911 VNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESPEKR 960
+L L +V++ +L E+ + +C S+ L +C + PE+R
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + RL ++D IAS + Y+ +H
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422
Query: 958 EKR 960
E+R
Sbjct: 423 EER 425
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + RL ++D IAS + Y+ +H
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422
Query: 958 EKR 960
E+R
Sbjct: 423 EER 425
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.8 bits (229), Expect = 9e-19, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V+EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 304
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+ +L+ ++E T R I + AP+ G ++K
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 423
Query: 958 EKR 960
E+R
Sbjct: 424 EER 426
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V+EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K IRH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + RL ++D IAS + Y+ +H
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 246
Query: 958 EKR 960
E+R
Sbjct: 247 EER 249
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 126
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 245
Query: 958 EKR 960
E+R
Sbjct: 246 EER 248
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 128
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 247
Query: 958 EKR 960
E+R
Sbjct: 248 EER 250
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 716 FSYFELLRATDNFAEN------NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTL--- 766
FS++EL T+NF E N G GGFG VY+ + + +A+K T
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 767 -KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLED---CLHSSNCALNI 822
+ F+ E +V +H NLV+++ S+ D LV Y NGSL D CL + L+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-PLSW 123
Query: 823 FCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
R I A+ + +LH H IH D+K +N+LLDE A +SDFG+A+ +
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 883 TMRTQTLATIGYMAPDEIFVGELSLK 908
++ + T Y AP E GE++ K
Sbjct: 181 VXXSRIVGTTAYXAP-EALRGEITPK 205
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.5 bits (223), Expect = 4e-18, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V+EYMS G L D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + RL ++D IAS + Y+ +H
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 249
Query: 958 EKR 960
E+R
Sbjct: 250 EER 252
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.7 bits (221), Expect = 6e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS GSL D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYMS G L D L + + RL ++D IAS + Y+ +H
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 958 EKR 960
E+R
Sbjct: 257 EER 259
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYM+ GSL D L + RL ++D IAS + Y+ +H
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 253
Query: 958 EKR 960
E+R
Sbjct: 254 EER 256
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ +AIK P S ++F E +V+K +RH LV++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID----IASALEYLHFGHSTPIIH 849
+ +V EYM+ GSL D L + RL ++D IAS + Y+ +H
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
DL+ +N+L+ E++V ++DFG+A+L+ ++E T R I + AP+ G ++K
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 910 --WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESP 957
W +L L +V++ +L E+ + +C S+ L +C + P
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 253
Query: 958 EKR 960
E+R
Sbjct: 254 EER 256
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSC 791
IG G FG+V+RA G ++A+K+ Q A + F E ++K +RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 792 SNDDFKALVLEYMSNGSLEDCLHSSNC--ALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849
+ ++V EY+S GSL LH S L+ RL++ D+A + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKL 875
DLK N+L+D+ + DFG+++L
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSC 791
IG G FG+V+RA G ++A+K+ Q A + F E ++K +RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 792 SNDDFKALVLEYMSNGSLEDCLHSSNC--ALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849
+ ++V EY+S GSL LH S L+ RL++ D+A + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+LK N+L+D+ + DFG+++L + S+ T +MAP+
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPE 209
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 19/240 (7%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ ++AIK P S +SF E +++K ++H LV++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNC-ALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
+ +V EYM+ GSL D L AL + +++ +A+ + Y+ IH DL
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--W 910
+ +N+L+ ++ ++DFG+A+L+ ++E T R I + AP+ G ++K W
Sbjct: 132 RSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 911 VNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESPEKR 960
+L LV + ++ +L E+ + + C +S+ L + C + PE+R
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEER 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 25/243 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ A ++A+K P S +++F AE V+K ++H LVK+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-EYLHFGHSTPIIHCDL 852
+ ++ E+M+ GSL D L S + +L ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--W 910
+ +N+L+ +V ++DFG+A+++ ++E T R I + AP+ I G ++K W
Sbjct: 311 RAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 911 VNDLLPVSLV-------------EVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESP 957
+L + +V EV+ ++L G E C ++++ + C P
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVI-RALERG--YRMPRPENCPEELYNIMMRCWKNRP 426
Query: 958 EKR 960
E+R
Sbjct: 427 EER 429
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ A ++A+K P S +++F AE V+K ++H LVK+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-EYLHFGHSTPIIHCDL 852
+ ++ E+M+ GSL D L S + +L ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--W 910
+ +N+L+ +V ++DFG+A+++ ++E T R I + AP+ I G ++K W
Sbjct: 138 RAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 911 VNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSIFSLALECTMESPEKR 960
+L + +V + + ++ E+ + E C ++++ + C PE+R
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 16 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 72
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 73 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 128
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 187
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 247
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 248 YQLMRLCWKERPEDR 262
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 8 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 65 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 120
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 179
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 240 YQLMRLCWKERPEDR 254
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 8 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 65 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 120
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 179
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 240 YQLMRLCWKERPEDR 254
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 14 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 71 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 126
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 185
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 246 YQLMRLCWKERPEDR 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 9 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 65
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 66 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 121
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 180
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 240
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 241 YQLMRLCWKERPEDR 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 10 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 66
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 67 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 122
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 181
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 241
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 242 YQLMRLCWKERPEDR 256
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 17 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 73
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 74 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 129
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAP 188
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 248
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 249 YQLMRLCWKERPEDR 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 14 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 71 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 126
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAP 185
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 246 YQLMRLCWKERPEDR 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 18 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 74
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 75 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 130
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAP 189
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 249
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 250 YQLMRLCWKERPEDR 264
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 8 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 65 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 120
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAP 179
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 240 YQLMRLCWKERPEDR 254
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 3 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 59
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 60 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 115
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAP 174
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 234
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 235 YQLMRLCWKERPEDR 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 13 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 69
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 70 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 125
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAP 184
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 244
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 245 YQLMRLCWKERPEDR 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 698 GTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAI-K 756
GT N I Q R SY+ + A++ I G G FG+VY+ + V + I K
Sbjct: 12 GTQEKNKIRPRGQ---RDSSYYWEIEASEVMLSTRI-GSGSFGTVYKGKWHGDVAVKILK 67
Query: 757 VFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSS 816
V P ++F E V++ RH N++ + + D+ A+V ++ SL LH
Sbjct: 68 VVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQ 125
Query: 817 NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
+F ++I A ++YLH + IIH D+K +N+ L E + + DFG+A +
Sbjct: 126 ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182
Query: 877 SGEDESTMRTQTLATIGYMAPDEI 900
S S Q ++ +MAP+ I
Sbjct: 183 SRWSGSQQVEQPTGSVLWMAPEVI 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 149
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 206
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF+ ++ + PEK
Sbjct: 207 TEKSAXKS--SDLWALGCIIY---QLVAGLPPFRAGNEGL---IFAKIIKLEYDFPEKFF 258
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 259 PKARDLVEKLLVLDAT--KRLG 278
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 149
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 206
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF+ ++ + PEK
Sbjct: 207 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEGL---IFAKIIKLEYDFPEKFF 258
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 259 PKARDLVEKLLVLDAT--KRLG 278
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 146
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELL 203
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 204 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 255
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 256 PKARDLVEKLLVLDAT--KRLG 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 150
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELL 207
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 208 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 259
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 260 PKARDLVEKLLVLDAT--KRLG 279
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 126
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 127 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 183
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 184 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 235
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 236 PKARDLVEKLLVLDAT--KRLG 255
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 127
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 128 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 184
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 185 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 236
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 237 PKARDLVEKLLVLDAT--KRLG 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 125
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 126 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 182
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 183 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 234
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 235 PKARDLVEKLLVLDAT--KRLG 254
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 124
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 125 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 181
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 182 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 233
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 234 PKARDLVEKLLVLDAT--KRLG 253
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 147
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 204
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 205 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 256
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 257 PKARDLVEKLLVLDAT--KRLG 276
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 149
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 206
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 207 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 258
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 259 PKARDLVEKLLVLDAT--KRLG 278
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 149
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 206
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 207 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 258
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 259 PKARDLVEKLLVLDAT--KRLG 278
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 131
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 132 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 188
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 189 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 240
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 241 PKARDLVEKLLVLDAT--KRLG 260
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 146
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 203
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 204 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 255
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 256 PKARDLVEKLLVLDAT--KRLG 275
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 147
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 204
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 205 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 256
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 257 PKARDLVEKLLVLDAT--KRLG 276
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 150
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 207
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 208 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 259
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 260 PKARDLVEKLLVLDAT--KRLG 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 149
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 206
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 207 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 258
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 259 PKARDLVEKLLVLDAT--KRLG 278
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 147
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP-ELL 204
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 205 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 256
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 257 PKARDLVEKLLVLDAT--KRLG 276
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 149
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P+
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE--L 205
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ E S + +DL + + L++G A E IF ++ + PEK
Sbjct: 206 LTEKSASK-SSDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 258
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 259 PKARDLVEKLLVLDAT--KRLG 278
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ + ++A+K P S +++F E ++K ++H LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL-NIMIDIASALEYLHFGHSTPIIHCDL 852
++ ++ EYM+ GSL D L S + +L + IA + Y+ IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI---ERKNYIHRDL 136
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
+ +NVL+ E ++ ++DFG+A+++ ++E T R I + AP+ I G ++K
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 64/255 (25%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G FG V+ ++A+K Q + + +F AE ++K
Sbjct: 4 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 60
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 61 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 116
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH +L+ +N+L+ + + ++DFG+A+L+ ++E T R I + AP
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAP 175
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 235
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 236 YQLMRLCWKERPEDR 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Query: 734 IGIGGFGSVYRARLED---GVEIAIK-VFHP--QCASTLKSFEAECEVIKNIRHRNLVKI 787
+G GG +VY A ED +++AIK +F P + TLK FE E + H+N+V +
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
I DD LV+EY+ +L + + S L++ +N I +++ H I
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKH---AHDMRI 132
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+H D+KP N+L+D + + DFG+AK LS E T L T+ Y +P++
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQ 183
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 154
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 211
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 212 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 263
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 264 PKARDLVEKLLVLDAT--KRLG 283
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRN 340
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 400 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 459
Query: 960 RI------DAKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 460 RPSFAEIHQAFETMFQESSISDEVEKELG 488
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 20/262 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F + AR L E AIK+ H + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 147
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P E+
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELL 204
Query: 902 VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+ + K +DL + + L++G A E IF ++ + PEK
Sbjct: 205 TEKSACKS--SDLWALGCIIY---QLVAGLPPFRAGNEYL---IFQKIIKLEYDFPEKFF 256
Query: 962 -DAKDTITRLLKIRDTLSKRIG 982
A+D + +LL + T KR+G
Sbjct: 257 PKARDLVEKLLVLDAT--KRLG 276
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K + ++ F E V+K I+H NLV+++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRN 382
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 442 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 501
Query: 960 RI------DAKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 502 RPSFAEIHQAFETMFQESSISDEVEKELG 530
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVF---HPQCASTLKSFEAECEVIKNIRH 781
++F I+G G F +V AR L E AIK+ H + + E +V+ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
VK+ + +D+ L Y NG L + + + C +I SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH- 152
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKP N+LL+EDM ++DFG AK+LS E + + T Y++P+
Sbjct: 153 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 727 NFAE---NNIIGIGGFGSVYRARLEDGVEIAIKVFH----PQCASTLKSFEAECEVIKNI 779
+FAE IIGIGGFG VYRA G E+A+K + T+++ E ++ +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
+H N++ + C + LV+E+ G L L +I +N + IA + YL
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDM--------VAHLSDFGMAKLLSGEDESTMRTQTLAT 891
H PIIH DLK SN+L+ + + + ++DFG+A+ E T +
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGA 177
Query: 892 IGYMAPDEI 900
+MAP+ I
Sbjct: 178 YAWMAPEVI 186
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ + ++A+K P S +++F E ++K ++H LV++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL-NIMIDIASALEYLHFGHSTPIIHCDL 852
++ ++ E+M+ GSL D L S + +L + IA + Y+ IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
+ +NVL+ E ++ ++DFG+A+++ ++E T R I + AP+ I G ++K
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ +++E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 137
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 256
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 257 RPSFAEIHQAFETMFQESSISDEVEKELG 285
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 21/255 (8%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN 778
+E+ R T E +G G G V+ ++A+K Q + + +F AE ++K
Sbjct: 8 WEVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-E 837
++H+ LV++ + + + ++ EYM NGSL D L + + I +N ++D+A+ + E
Sbjct: 65 LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAE 120
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ F IH DL+ +N+L+ + + ++DFG+A+L+ + E T R I + AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAP 179
Query: 898 DEIFVGELSLKR--WVNDLLPVSLVE--------VVDKSLLSGEEKHF--AAKEQCLLSI 945
+ I G ++K W +L +V + + ++ E+ + + C +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 946 FSLALECTMESPEKR 960
+ L C E PE R
Sbjct: 240 YQLMRLCWKERPEDR 254
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 708 SSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTL 766
S P+ + +E+ R + + +G G +G VY + + +A+K +
Sbjct: 2 SMDPSSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 767 KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCR 825
+ F E V+K I+H NLV+++ C+ + +++E+M+ G+L D L N +N
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885
L + I+SA+EYL IH DL N L+ E+ + ++DFG+++L++G D T
Sbjct: 119 LYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 174
Query: 886 TQTLATIGYMAPDEIFVGELSLK 908
I + AP+ + + S+K
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIK 197
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N ++ L + I+SA+EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRN 343
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 403 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 462
Query: 960 RI------DAKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 463 RPSFAEIHQAFETMFQESSISDEVEKELG 491
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS 789
IG G FG V YR G ++A+K +T ++F AE V+ +RH NLV+++
Sbjct: 20 IGKGEFGDVMLGDYR-----GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 790 SCSNDDFKA-LVLEYMSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ +V EYM+ GSL D L S L C L +D+ A+EYL
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 129
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
+H DL NVL+ ED VA +SDFG+ K E ST T L + + AP+ + S
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLP-VKWTAPEALREAAFST 184
Query: 908 K 908
K
Sbjct: 185 K 185
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS 789
IG G FG V YR G ++A+K +T ++F AE V+ +RH NLV+++
Sbjct: 14 IGKGEFGDVMLGDYR-----GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 790 SCSNDDFKA-LVLEYMSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ +V EYM+ GSL D L S L C L +D+ A+EYL
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 123
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
+H DL NVL+ ED VA +SDFG+ K E ST T L + + AP+ + + S
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLP-VKWTAPEALREKKFST 178
Query: 908 K 908
K
Sbjct: 179 K 179
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS 789
IG G FG V YR G ++A+K +T ++F AE V+ +RH NLV+++
Sbjct: 29 IGKGEFGDVMLGDYR-----GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 790 SCSNDDFKA-LVLEYMSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ +V EYM+ GSL D L S L C L +D+ A+EYL
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 138
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
+H DL NVL+ ED VA +SDFG+ K E ST T L + + AP+ + + S
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLP-VKWTAPEALREKKFST 193
Query: 908 K 908
K
Sbjct: 194 K 194
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH+S + ++I A ++YLH + IIH DLK
Sbjct: 80 PQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 135
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED + DFG+A + S S Q +I +MAP+ I
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 732 NIIGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G FG V YR G ++A+K + +T ++F AE V+ +RH NLV++
Sbjct: 199 QTIGKGEFGDVMLGDYR-----GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 788 ISSCSNDDFK-ALVLEYMSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHST 845
+ + +V EYM+ GSL D L S L C L +D+ A+EYL
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 308
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGEL 905
+H DL NVL+ ED VA +SDFG+ K E ST T L + + AP+ + +
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLP-VKWTAPEALREKKF 363
Query: 906 SLK 908
S K
Sbjct: 364 STK 366
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 149
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 209 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 268
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 269 RPSFAEIHQAFETMFQESSISDEVEKELG 297
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 141
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 261 RPSFAEIHQAFETMFQESSISDEVEKELG 289
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 138
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 258 RPSFAEIHQAFETMFQESSISDEVEKELG 286
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 138
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 258 RPSFAEIHQAFETMFQESSISDEVEKELG 286
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 708 SSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTL 766
S P+ + +E+ R + + +G G +G VY + + +A+K +
Sbjct: 2 SMDPSSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 767 KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCR 825
+ F E V+K I+H NLV+++ C+ + ++ E+M+ G+L D L N +N
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885
L + I+SA+EYL IH DL N L+ E+ + ++DFG+++L++G D T
Sbjct: 119 LYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 174
Query: 886 TQTLATIGYMAPDEIFVGELSLK 908
I + AP+ + + S+K
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIK 197
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.9 bits (185), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 141
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 103 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 158
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 137
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 256
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 257 RPSFAEIHQAFETMFQESSISDEVEKELG 285
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 138
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 258 RPSFAEIHQAFETMFQESSISDEVEKELG 286
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G FG VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 134
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 910 WVNDLL----------------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT 953
W +L P + E+++K + E C ++ L C
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRMERPEGCPEKVYELMRACW 247
Query: 954 MESPEKRID------AKDTITRLLKIRDTLSKRIG 982
+P R A +T+ + I D + K +G
Sbjct: 248 QWNPSDRPSFAEIHQAFETMFQESSISDEVEKELG 282
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 136
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 78 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 133
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ +++E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 136
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKELG 284
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ +++E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 136
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKELG 284
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 136
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 136
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 140
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N +N L + I+SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 136
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A + S S Q +I +MAP+ I
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH+S + ++I A ++YLH + IIH DLK
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED + DFG+A S S Q +I +MAP+ I
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ +++E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 134
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V+ A ++A+K P S +++F AE V+K ++H LVK+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-EYLHFGHSTPIIHCDL 852
+ ++ E+M+ GSL D L S + +L ID ++ + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--W 910
+ +N+L+ +V ++DFG+A R I + AP+ I G ++K W
Sbjct: 305 RAANILVSASLVCKIADFGLA-----------RVGAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 911 VNDLLPVSLV-------------EVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESP 957
+L + +V EV+ ++L G E C ++++ + C P
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVI-RALERG--YRMPRPENCPEELYNIMMRCWKNRP 410
Query: 958 EKR 960
E+R
Sbjct: 411 EER 413
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 35/275 (12%)
Query: 730 ENNIIGIGGFGSVYRARLEDG-----VEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRN 783
+IG G FG VY+ L+ V +AIK + F E ++ H N
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
++++ S ++ EYM NG+L+ L + ++ + ++ IA+ ++YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA--- 164
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ-TLATIGYMAPDEIFV 902
+ +H DL N+L++ ++V +SDFG++++L + E+T T I + AP+ I
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI-- 222
Query: 903 GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQ-----------------CLLSI 945
S +++ + S V+ + + GE ++ C +I
Sbjct: 223 ---SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAI 279
Query: 946 FSLALECTMESPEKRIDAKDTIT---RLLKIRDTL 977
+ L ++C + +R D ++ +L++ D+L
Sbjct: 280 YQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH+S + ++I A ++YLH + IIH DLK
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED + DFG+A S S Q +I +MAP+ I
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 136
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKELG 284
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 136
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKELG 284
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 141
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 910 WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK 959
W +L P +++ L ++ E C ++ L C +P
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 960 RID------AKDTITRLLKIRDTLSKRIG 982
R A +T+ + I D + K +G
Sbjct: 261 RPSFAEIHQAFETMFQESSISDEVEKELG 289
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A S S Q +I +MAP+ I
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A S S Q +I +MAP+ I
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 27/182 (14%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTL--KSFEAEC---EVIKNIRHRNLVKI 787
+G GGFG V R +D G ++AIK QC L K+ E C +++K + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 788 ------ISSCSNDDFKALVLEYMSNGSLEDCLHSSN--CALNIFCRLNIMIDIASALEYL 839
+ + +D L +EY G L L+ C L ++ DI+SAL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 840 HFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
H IIH DLKP N++L + ++ + D G AK L D+ + T+ + T+ Y+A
Sbjct: 138 H---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 191
Query: 897 PD 898
P+
Sbjct: 192 PE 193
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 27/182 (14%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTL--KSFEAEC---EVIKNIRHRNLVKI 787
+G GGFG V R +D G ++AIK QC L K+ E C +++K + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 788 ------ISSCSNDDFKALVLEYMSNGSLEDCLHSSN--CALNIFCRLNIMIDIASALEYL 839
+ + +D L +EY G L L+ C L ++ DI+SAL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 840 HFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
H IIH DLKP N++L + ++ + D G AK L D+ + T+ + T+ Y+A
Sbjct: 139 H---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 192
Query: 897 PD 898
P+
Sbjct: 193 PE 194
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG+VY+ + V + + L++F+ E V++ RH N++ + +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
A+V ++ SL LH + ++I A ++YLH + IIH DLK
Sbjct: 96 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 151
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+N+ L ED+ + DFG+A S S Q +I +MAP+ I
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ ++ E+M+ G+L D L N ++ L + I+SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRD 134
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-- 909
L N L+ E+ + ++DFG+++L++G D T I + AP+ + + S+K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 910 WVNDLL----------------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT 953
W +L P + E+++K + E C ++ L C
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRMERPEGCPEKVYELMRACW 247
Query: 954 MESPEKRID------AKDTITRLLKIRDTLSKRIG 982
+P R A +T+ + I D + K +G
Sbjct: 248 QWNPSDRPSFAEIHQAFETMFQESSISDEVEKELG 282
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 734 IGIGGFGSVYRAR------LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787
+G G FG V+ A +D + +A+K + K F+ E E++ N++H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHS---------------SNCALNIFCRLNIMIDI 832
C + D +V EYM +G L L + + L + L+I I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
AS + YL H +H DL N L+ +++ + DFGM++ + D + T+ I
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 893 GYMAPDEI 900
+M P+ I
Sbjct: 200 RWMPPESI 207
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG+A++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 885 RTQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 206 TTRGGKIPIRWTSPEAI 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 26/294 (8%)
Query: 704 DIILSSQPTIRRFSYFELLRAT--DNFAENN-------IIGIGGFGSVYRARLE-DGVEI 753
D +LS+Q + + S L RA D + N+ IG G FG V+ RL D +
Sbjct: 83 DHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV 142
Query: 754 AIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
A+K LK+ F E ++K H N+V++I C+ +V+E + G
Sbjct: 143 AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF 202
Query: 813 LHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872
L + L + L ++ D A+ +EYL S IH DL N L+ E V +SDFGM
Sbjct: 203 LRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGM 259
Query: 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--WVNDLL---PVSLVEVVDKSL 927
++ + + + + AP+ + G S + W +L SL +L
Sbjct: 260 SREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319
Query: 928 LSGEEKHFAAK-------EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974
+ + + F K E C ++F L +C P +R L IR
Sbjct: 320 SNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 43/297 (14%)
Query: 722 LRATDNFAENNI-----IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEA 771
+R F E ++ +G G FGSV R L+D G +A+K L+ FE
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM 829
E E++K+++H N+VK C + + L++EY+ GSL D L ++ L
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQT 888
I +EYL + IH DL N+L++ + + DFG+ K+L + E ++
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 889 LATIGYMAPDEIFVGELSLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH---- 934
+ I + AP+ + + S+ W ++ L ++KS + G +K
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 935 -------------FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 26/294 (8%)
Query: 704 DIILSSQPTIRRFSYFELLRAT--DNFAENN-------IIGIGGFGSVYRARLE-DGVEI 753
D +LS+Q + + S L RA D + N+ IG G FG V+ RL D +
Sbjct: 83 DHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV 142
Query: 754 AIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
A+K LK+ F E ++K H N+V++I C+ +V+E + G
Sbjct: 143 AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF 202
Query: 813 LHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872
L + L + L ++ D A+ +EYL S IH DL N L+ E V +SDFGM
Sbjct: 203 LRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGM 259
Query: 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--WVNDLL---PVSLVEVVDKSL 927
++ + + + + AP+ + G S + W +L SL +L
Sbjct: 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319
Query: 928 LSGEEKHFAAK-------EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974
+ + + F K E C ++F L +C P +R L IR
Sbjct: 320 SNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIR 780
LR +F E ++G G FG V +AR D AIK L + +E ++ ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 781 H-------------RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
H RN VK +++ + +EY NG+L D +HS N
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 828 IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874
+ I AL Y+H S IIH DLKP N+ +DE + DFG+AK
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 734 IGIGGFGSVYRARL------EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787
+G G FG V+ A +D + +A+K + K F E E++ N++H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSN------------CALNIFCRLNIMIDIASA 835
C D +V EYM +G L L + L L+I IA+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895
+ YL H +H DL N L+ E+++ + DFGM++ + D + T+ I +M
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 896 APDEI 900
P+ I
Sbjct: 198 PPESI 202
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 141
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 202 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 261
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 262 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 139
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 200 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 259
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 260 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 140
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 201 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 260
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 261 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 257
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 258 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 254
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 255 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 272
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 273 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 138
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 199 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 258
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 259 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L + ++ L I +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 257
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 258 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 133
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 194 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 253
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 254 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTL--KSFEAECE 774
YF+ + +N ++G G +G V + R +D G +AIK F + K E +
Sbjct: 20 YFQSMEKYENLG---LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
++K +RH NLV ++ C LV E++ + L+D N L+ + I +
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIIN 135
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
+ F HS IIH D+KP N+L+ + V L DFG A+ L+ E + +AT Y
Sbjct: 136 GI---GFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWY 190
Query: 895 MAPDEIFVGELSLKRWVN 912
AP E+ VG++ + V+
Sbjct: 191 RAP-ELLVGDVKYGKAVD 207
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 165
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST-MRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 226 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 285
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 286 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 132
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 252
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 253 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 292
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +G VY + + +A+K ++ F E V+K I+H NLV+++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNC-ALNIFCRLNIMIDIASALEYLHFGHSTPIIHCD 851
+ +V EYM G+L D L N + L + I+SA+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL---EKKNFIHRD 155
Query: 852 LKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
L N L+ E+ V ++DFG+++L++G D T I + AP+ + S+K
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 272
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977
+ C I+ + EC + +R +D R+ +IRD +
Sbjct: 273 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885
+ ++ IAS ++YL +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 886 TQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 207 TRGGKIPIRWTSPEAI 222
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F IG G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EYM G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 885 RTQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 206 TTRGGKIPIRWTSPEAI 222
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 254
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 255 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 885 RTQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 206 TTRGGKIPIRWTSPEAI 222
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 885 RTQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 206 TTRGGKIPIRWTSPEAI 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG+ ++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 885 RTQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 206 TTRGGKIPIRWTSPEAI 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F IG G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EYM G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 885 RTQ 887
T+
Sbjct: 206 TTR 208
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT TL T Y+AP
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAP--- 193
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 194 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 247
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 248 SSDLKDLLRNLLQV--DLTKRFGNLK 271
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 47/275 (17%)
Query: 734 IGIGGFGSVYRARL------EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787
+G G FG V+ A +D + +A+K S + F+ E E++ ++H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHS--------------SNCALNIFCRLNIMIDIA 833
C+ +V EYM +G L L S + L + L + +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ + YL H +H DL N L+ + +V + DFGM++ + D + +T+ I
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 894 YMAPDEIFVGELSLKRWVNDLLPVSLV------------------EVVDKSLLSGEEKHF 935
+M P+ I + + + +D+ +V E +D + G E
Sbjct: 226 WMPPESILYRKFTTE---SDVWSFGVVLWEIFTYGKQPWYQLSNTEAID-CITQGRE--L 279
Query: 936 AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970
C ++++ C P++R KD RL
Sbjct: 280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 29 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 147
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 148 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 885 RTQ 887
T+
Sbjct: 204 TTR 206
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT TL T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 709 SQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCA 763
S T+ F+ + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 19 STQTVHEFA--KELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 75
Query: 764 STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIF 823
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
Query: 824 CRLNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 136 QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 191
Query: 883 TMRTQ 887
T+
Sbjct: 192 AYTTR 196
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 709 SQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCA 763
S T+ F+ + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 2 STQTVHEFA--KELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 58
Query: 764 STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIF 823
+ F E ++ H N++++ + +V EYM NGSL+ L + +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
Query: 824 CRLNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 883 TMRTQ 887
T+
Sbjct: 175 AYTTR 179
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 734 IGIGGFGSVYRARLE-----DGVEIAIKVFHPQCAST-LKSFEAECEVIKNIRHRNLVKI 787
+G G FG V R + G ++A+K P+ + + E E+++N+ H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 788 ISSCSNDDFKA--LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
C+ D L++E++ +GSL++ L + +N+ +L + I ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 145
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPD 898
+H DL NVL++ + + DFG+ K + + E T++ + + + AP+
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 734 IGIGGFGSVYRARLE-----DGVEIAIKVFHPQCAST-LKSFEAECEVIKNIRHRNLVKI 787
+G G FG V R + G ++A+K P+ + + E E+++N+ H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 788 ISSCSNDDFKA--LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
C+ D L++E++ +GSL++ L + +N+ +L + I ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 133
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPD 898
+H DL NVL++ + + DFG+ K + + E T++ + + + AP+
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++EY+ GSL D L ++ L I +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 135
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH +L N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 196 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 255
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 256 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 295
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA-TIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT LA T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F IG G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+DE ++DFG AK + G RT L T Y+AP
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 194
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 195 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 248
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 249 SSDLKDLLRNLLQV--DLTKRFGNLK 272
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG V+ + ++AIK + A + + F E EV+ + H LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
LV E+M +G L D L + L + +D+ + YL +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEASVIHRDLA 130
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
N L+ E+ V +SDFGM + + +D+ T T T + + +P E+F
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVF 176
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + I+G GG V+ AR L D ++A+KV A S F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISSCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
H +V + + + +V+EY+ +L D +H+ + + I + IA A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG--- 893
+ L+F H IIH D+KP+N+++ + DFG+A+ ++ D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 894 YMAPDE 899
Y++P++
Sbjct: 185 YLSPEQ 190
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + I+G GG V+ AR L D ++A+KV A S F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISSCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
H +V + + + +V+EY+ +L D +H+ + + I + IA A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG--- 893
+ L+F H IIH D+KP+N+++ + DFG+A+ ++ D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 894 YMAPDE 899
Y++P++
Sbjct: 185 YLSPEQ 190
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 720 ELLRATDNFAENN---IIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEV 775
+LL + EN ++G G +G VY R L + V IAIK + + + E +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
K+++H+N+V+ + S S + F + +E + GSL L S L I
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD-NEQTIGFYTKQI 131
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
LE L + H I+H D+K NVL++ V +SDFG +K L+G + T T T T+ Y
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFT-GTLQY 189
Query: 895 MAPDEI 900
MAP+ I
Sbjct: 190 MAPEII 195
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 228
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 229 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 282
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 283 SSDLKDLLRNLLQV--DLTKRFGNLK 306
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 5/177 (2%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
D + ++G G +G VY R L + V IAIK + + + E + K+++H+N+
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
V+ + S S + F + +E + GSL L S L I LE L + H
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD-NEQTIGFYTKQILEGLKYLHD 126
Query: 845 TPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
I+H D+K NVL++ V +SDFG +K L+G + T T T T+ YMAP+ I
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFT-GTLQYMAPEII 181
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 733 IIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAEC------EVIKNIRHRNLV 785
+IG G FG V AR + + V A+KV Q + LK E + ++KN++H LV
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVL--QKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
+ S D VL+Y++ G L L C L R +IASAL YLH S
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SL 158
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I++ DLKP N+LLD L+DFG+ K + E ST T T Y+AP+
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTST-FCGTPEYLAPE 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK---SFEAECEVIKNIRHR 782
++ + +G+G FG V + G ++A+K+ + Q +L + E + +K RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+++K+ S +V+EY+S G L D + + R + I SA++Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH-- 128
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
++H DLKP NVLLD M A ++DFG++ ++S D +RT + + Y AP E+
Sbjct: 129 -RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRT-SCGSPNYAAP-EVIS 183
Query: 903 GEL 905
G L
Sbjct: 184 GRL 186
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 734 IGIGGFGSVYRAR---LED--GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+G G FGSV R L+D G +A+K L+ FE E E++K+++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 789 SSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
C + + L++E++ GSL + L ++ L I +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVGEL 905
IH DL N+L++ + + DFG+ K+L + E ++ + I + AP+ + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 906 SLKR--WVNDLLPVSLVEVVDKS--------LLSGEEKH-----------------FAAK 938
S+ W ++ L ++KS + G +K
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 257
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978
+ C I+ + EC + +R +D R+ +IRD ++
Sbjct: 258 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNIRHRN 783
D F +G G FG V+ G+E IK + + ++ EAE EV+K++ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNC---ALNIFCRLNIMIDIASALEYLH 840
++KI + +V+E G L + + S+ AL+ +M + +AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAH----LSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
H ++H DLKP N+L +D H + DFG+A+L ++ S T T YMA
Sbjct: 142 SQH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMA 194
Query: 897 PDEIFVGELSLK 908
P E+F +++ K
Sbjct: 195 P-EVFKRDVTFK 205
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 202
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 203 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 256
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 257 SSDLKDLLRNLLQV--DLTKRFGNLK 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIK---VFHPQCASTLKSFEAECEVIKNIRHR 782
NF IG G F VYRA L DGV +A+K +F A E +++K + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNI---MIDIASALEYL 839
N++K +S D+ +VLE G L + + + + + SALE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
H S ++H D+KP+NV + V L D G+ + S ++T + T YM+P+
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS--SKTTAAHSLVGTPYYMSPER 207
Query: 900 I 900
I
Sbjct: 208 I 208
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG V+ + ++AIK + A + + F E EV+ + H LV++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
LV E+M +G L D L + L + +D+ + YL +IH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 128
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
N L+ E+ V +SDFGM + + +D+ T T T + + +P E+F
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVF 174
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG V+ + ++AIK + A + + F E EV+ + H LV++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
LV E+M +G L D L + L + +D+ + YL +IH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 133
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
N L+ E+ V +SDFGM + + +D+ T T T + + +P E+F
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVF 179
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG V+ + ++AIK + A + + F E EV+ + H LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
LV E+M +G L D L + L + +D+ + YL +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 130
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
N L+ E+ V +SDFGM + + +D+ T T T + + +P E+F
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVF 176
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 737 GGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS----CS 792
G FG V++A+L + +A+K+F Q + ++ E E + ++H N+++ I + S
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF-------GHST 845
D L+ + GSL D L ++ + N C +I +A L YLH GH
Sbjct: 93 VDVDLWLITAFHEKGSLSDFLKANVVSWNELC--HIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMRTQTLATIGYMAPDEIFVGE 904
I H D+K NVLL ++ A ++DFG+A K +G+ Q + T YMAP E+ G
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAP-EVLEGA 208
Query: 905 LSLKR 909
++ +R
Sbjct: 209 INFQR 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 200
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 201 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 254
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 255 SSDLKDLLRNLLQV--DLTKRFGNLK 278
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V E M NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 885 RTQ 887
T+
Sbjct: 206 TTR 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG+AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLXGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + I+G GG V+ AR L D ++A+KV A S F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISSCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
H +V + + + +V+EY+ +L D +H+ + + I + IA A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG--- 893
+ L+F H IIH D+KP+N+L+ + DFG+A+ ++ D QT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA--DSGNSVXQTAAVIGTAQ 184
Query: 894 YMAPDE 899
Y++P++
Sbjct: 185 YLSPEQ 190
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 711 PTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCAST 765
PT + + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 766 LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR 825
+ F E ++ H N++++ + +V E M NGSL+ L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885
+ ++ IAS ++YL +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 150 VGMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 886 TQ-TLATIGYMAPDEI 900
T+ I + +P+ I
Sbjct: 207 TRGGKIPIRWTSPEAI 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK---SFEAECEVIKNIRHRNLVKI 787
+ +G+G FG V + E G ++A+K+ + Q +L E + +K RH +++K+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
S +V+EY+S G L D + N L+ + I S ++Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCH---RHMV 137
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGEL 905
+H DLKP NVLLD M A ++DFG++ ++S D +R + + Y AP E+ G L
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRX-SCGSPNYAAP-EVISGRL 191
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 27/265 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNL 984
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNL 284
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG V+ + ++AIK + A + + F E EV+ + H LV++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
LV E+M +G L D L + L + +D+ + YL +IH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 131
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
N L+ E+ V +SDFGM + + +D+ T T T + + +P E+F
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVF 177
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 228
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 229 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 282
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 283 SSDLKDLLRNLLQV--DLTKRFGNLK 306
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
++G G FG V +A+ ++AIK + S K+F E + + H N+VK+ +C
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM---IDIASALEYLHFGHSTPIIH 849
N LV+EY GSL + LH + L + + M + + + YLH +IH
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 850 CDLKPSNVLL-DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVG 903
DLKP N+LL V + DFG A D T T + +MAP E+F G
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEG 178
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
++G G FG V +A+ ++AIK + S K+F E + + H N+VK+ +C
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM---IDIASALEYLHFGHSTPIIH 849
N LV+EY GSL + LH + L + + M + + + YLH +IH
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 850 CDLKPSNVLL-DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVG 903
DLKP N+LL V + DFG A D T T + +MAP E+F G
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEG 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G T TL T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTLCGTPEYLAP--- 228
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 229 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 282
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 283 SSDLKDLLRNLLQV--DLTKRFGNLK 306
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 709 SQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCA 763
S T+ F+ + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 2 STQTVHEFA--KELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 58
Query: 764 STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIF 823
+ F E ++ H N++++ + +V E M NGSL+ L + +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
Query: 824 CRLNIMIDIASALEYL-HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
+ ++ IAS ++YL G+ +H DL N+L++ ++V +SDFG++++L + E+
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 883 TMRTQ 887
T+
Sbjct: 175 AYTTR 179
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 200
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 201 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 254
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 255 SSDLKDLLRNLLQV--DLTKRFGNLK 278
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG+AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQC-ASTLKSFEAECE 774
Y ELL+ + + IG GGF V A + G +AIK+ S L + E E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
+KN+RH+++ ++ + +VLEY G L D + S + R+ + I S
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVS 119
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
A+ Y+H S H DLKP N+L DE L DFG+ G + ++T ++ Y
Sbjct: 120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAY 175
Query: 895 MAPDEI 900
AP+ I
Sbjct: 176 AAPELI 181
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY+ G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 737 GGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS---CSN 793
G FG V++A+L + +A+K+F Q + +S E E ++H NL++ I++ SN
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 794 DDFKA-LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF--------GHS 844
+ + L+ + GSL D L + N C ++ ++ L YLH GH
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKGNIITWNELC--HVAETMSRGLSYLHEDVPWCRGEGHK 141
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMRTQTLATIGYMAPDEIFVG 903
I H D K NVLL D+ A L+DFG+A + G+ Q + T YMAP E+ G
Sbjct: 142 PSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAP-EVLEG 199
Query: 904 ELSLKR 909
++ +R
Sbjct: 200 AINFQR 205
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 469 ELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGP 528
+LDL NK+S S LT L+ L L N+ + F LK++ + ++ N L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-- 98
Query: 529 ISLAIGNLKAVVG---IDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMT 585
+L IG +V + L RN L P + L L +SL YN L+ F +T
Sbjct: 99 -ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 586 SLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
SL+ L L NN++ +F+KL+ LK L L N+LK +P G
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGA 200
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 56/273 (20%)
Query: 57 NASICSWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSS 116
N ++C G +C N++K +++ SS L IP I + K LDL NKLSS +PS
Sbjct: 1 NEALCKKDGGVCSCNNNK-NSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSS-LPSK 55
Query: 117 IF-TMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHL 175
F ++ L++LYL DN+L LP I L+ L+ L
Sbjct: 56 AFHRLTKLRLLYLNDNKLQT-------------------------LPAGIFKELKNLETL 90
Query: 176 FLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIP 235
++ +N +LQ L +G L L + L N+L P
Sbjct: 91 WVTDN--------------KLQALPIGV----------FDQLVNLAELRLDRNQLKSLPP 126
Query: 236 QEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEF 295
+ L L L LG+N L + +++LKE+ LYNN L +P L L+
Sbjct: 127 RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKT 185
Query: 296 LNLGINSFSGTIPSSITNASKLILLEMGSNSFS 328
L L N + + KL +L++ N +
Sbjct: 186 LKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 186 IPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEI-GYLQNL 244
IPS++ ++L L N LS K LT L+ + L +NKL +P I L+NL
Sbjct: 31 IPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNL 87
Query: 245 DVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSF 303
+ L + N L + P +F+ + L E+ L N L SLP R+ +L L +L+LG N
Sbjct: 88 ETLWVTDNKLQAL-PIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL 145
Query: 304 SGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSS 363
+ L L + +N A L LK + NN PE F S
Sbjct: 146 QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKL-DNNQLKRVPEGAFDS- 203
Query: 364 LANCKKLRYLGLGGNPLD 381
+KL+ L L NP D
Sbjct: 204 ---LEKLKMLQLQENPWD 218
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 8/196 (4%)
Query: 306 TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLA 365
IPS+I +K L++ SN S A L L+L ++ N+ T G L
Sbjct: 30 AIPSNIPADTKK--LDLQSNKLSSLPSKAFHRLTKLRL--LYLNDNKLQTLPAGIFKELK 85
Query: 366 NCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLG 425
N L L + N L LP + + ++L L + + P+ +L+ L LSLG
Sbjct: 86 N---LETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG 141
Query: 426 GNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCL 485
N L F L L+ L L N+L L+ L L L+ N++
Sbjct: 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAF 201
Query: 486 GNLTSLQYLNLGSNRF 501
+L L+ L L N +
Sbjct: 202 DSLEKLKMLQLQENPW 217
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 6/153 (3%)
Query: 209 AIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFN-MST 267
AIP I T +++ L +NKL + L L +L L N L +PA IF +
Sbjct: 30 AIPSNIPADT--KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 268 LKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSF 327
L+ +++ +N L +LP + L NL L L N P + +KL L +G N
Sbjct: 87 LETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145
Query: 328 SGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGF 360
L +LK + +NN PE F
Sbjct: 146 QSLPKGVFDKLTSLKELRL-YNNQLKRVPEGAF 177
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 81/217 (37%), Gaps = 32/217 (14%)
Query: 331 IPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGN 390
IPS I + K D+ N L SS P F KLR L L N L LP+ I
Sbjct: 31 IPSNIP--ADTKKLDLQSNKL-SSLPSKAF----HRLTKLRLLYLNDNKLQT-LPAGIFK 82
Query: 391 LSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAF 450
+LE L + + L NL L L N L P F L KL L L +
Sbjct: 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142
Query: 451 NKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFW 510
N+L S+P + LTSL+ L L +N+ V F
Sbjct: 143 NELQ-SLPKGV-----------------------FDKLTSLKELRLYNNQLKRVPEGAFD 178
Query: 511 NLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRN 547
L ++ + + +N L A +L+ + + L N
Sbjct: 179 KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK---SFEAECEVIKNIRHR 782
++ + +G+G FG V + G ++A+K+ + Q +L + E + +K RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+++K+ S +V+EY+S G L D + + R + I SA++Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH-- 128
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
++H DLKP NVLLD M A ++DFG++ ++S D +R + + Y AP E+
Sbjct: 129 -RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLR-DSCGSPNYAAP-EVIS 183
Query: 903 GEL 905
G L
Sbjct: 184 GRL 186
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
IG G FG V+ + ++AIK S F E EV+ + H LV++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
LV E+M +G L D L + L + +D+ + YL +IH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 150
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
N L+ E+ V +SDFGM + + +D+ T T T + + +P E+F
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVF 196
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 43/274 (15%)
Query: 734 IGIGGFGSVYRARL------EDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVK 786
+G FG VY+ L E +AIK + L+ F E + ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL-----HSS----------NCALNIFCRLNIMID 831
++ + D +++ Y S+G L + L HS AL ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
IA+ +EYL H ++H DL NVL+ + + +SD G+ + + D + +L
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 892 IGYMAPDEIFVGELSLKRWVNDLLP--VSLVEVVDKSL-------------LSGEEKHFA 936
I +MAP+ I G+ S+ +D+ V L EV L + +
Sbjct: 211 IRWMAPEAIMYGKFSID---SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 267
Query: 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970
+ C +++L +EC E P +R KD +RL
Sbjct: 268 CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 43/274 (15%)
Query: 734 IGIGGFGSVYRARL------EDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVK 786
+G FG VY+ L E +AIK + L+ F E + ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL-----HSS----------NCALNIFCRLNIMID 831
++ + D +++ Y S+G L + L HS AL ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
IA+ +EYL H ++H DL NVL+ + + +SD G+ + + D + +L
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 892 IGYMAPDEIFVGELSLKRWVNDLLP--VSLVEVVDKSL-------------LSGEEKHFA 936
I +MAP+ I G+ S+ +D+ V L EV L + +
Sbjct: 194 IRWMAPEAIMYGKFSID---SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 250
Query: 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970
+ C +++L +EC E P +R KD +RL
Sbjct: 251 CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 733 IIGIGGFGSVYRARL----EDGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKI 787
IIG G G V RL + V +AIK + F +E ++ H N++++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-FGHSTP 846
+ +V EYM NGSL+ L + + I + ++ + + + YL G+
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY--- 172
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAPDEI 900
+H DL NVL+D ++V +SDFG++++L + D + T I + AP+ I
Sbjct: 173 -VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 734 IGIGGFGSVYRARL------EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787
+G G FG V+ A +D + +A+K S + F+ E E++ ++H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHS--------------SNCALNIFCRLNIMIDIA 833
C+ +V EYM +G L L S + L + L + +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ + YL H +H DL N L+ + +V + DFGM++ + D + +T+ I
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 894 YMAPDEIFVGELSLKR--WVNDLL-------------PVSLVEVVDKSLLSGEEKHFAAK 938
+M P+ I + + + W ++ +S E +D + G E
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID-CITQGRE--LERP 259
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRL 970
C ++++ C P++R KD RL
Sbjct: 260 RACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 734 IGIGGFGSVYRARL------EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787
+G G FG V+ A +D + +A+K S + F+ E E++ ++H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHS--------------SNCALNIFCRLNIMIDIA 833
C+ +V EYM +G L L S + L + L + +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ + YL H +H DL N L+ + +V + DFGM++ + D + +T+ I
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 894 YMAPDEIFVGELSLKR--WVNDLL-------------PVSLVEVVDKSLLSGEEKHFAAK 938
+M P+ I + + + W ++ +S E +D + G E
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID-CITQGRE--LERP 253
Query: 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRL 970
C ++++ C P++R KD RL
Sbjct: 254 RACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 56/284 (19%)
Query: 727 NFAENNI-----IGIGGFGSVYRAR------LEDGVEIAIKVFHPQCASTLKS-FEAECE 774
+ NNI IG G FG V++AR E +A+K+ + ++ +++ F+ E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN----CALN--------- 821
++ + N+VK++ C+ L+ EYM+ G L + L S + C+L+
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 822 --------IFC--RLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFG 871
+ C +L I +A+ + YL +H DL N L+ E+MV ++DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 872 MAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--WVNDLLPVSLVEVVDKSL-- 927
+++ + D I +M P+ IF + + W V L E+ L
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG---VVLWEIFSYGLQP 276
Query: 928 ---LSGEEKHF--------AAKEQCLLSIFSLALECTMESPEKR 960
++ EE + A E C L +++L C + P R
Sbjct: 277 YYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADR 320
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 17/254 (6%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + + ++A+K+ S + F+ E + + + H LVK CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
+ +V EY+SNG L + L S L L + D+ + +L S IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLA 131
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR--WV 911
N L+D D+ +SDFGM + + +D+ T + + AP+ + S K W
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 912 NDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961
+L P L + L + +I+ + C E PEKR
Sbjct: 191 FGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRP 250
Query: 962 DAKDTITRLLKIRD 975
+ ++ + +R+
Sbjct: 251 TFQQLLSSIEPLRE 264
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 32/246 (13%)
Query: 732 NIIGIGGFGSVYRA-RLEDG----VEIAIKVFHPQCASTLKSFEAECE---VIKNIRHRN 783
++G G FG+V++ + +G + + IKV + S +SF+A + I ++ H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+V+++ C + LV +Y+ GSL D + AL LN + IA + YL
Sbjct: 95 IVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 150
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVG 903
++H +L NVLL ++DFG+A LL +D+ + ++ I +MA + I G
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 904 ELSLKR--W-----VNDLLP--------VSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSL 948
+ + + W V +L+ + L EV D LL E+ A + C + ++ +
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD--LLEKGER-LAQPQICTIDVYMV 267
Query: 949 ALECTM 954
++C M
Sbjct: 268 MVKCWM 273
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
L K+ S ++ +V+EY G + L R I EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 733 IIGIGGFGSVYRARLEDGVE----IAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKI 787
+IG G FG V R RL+ + +AIK + F +E ++ H N++++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+N ++ E+M NG+L+ L ++ + + ++ IAS + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 139
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA---TIGYMAPDEI 900
+H DL N+L++ ++V +SDFG+++ L T +L I + AP+ I
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G +GSVY+A E G +AIK S L+ E +++ ++VK S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
+ +V+EY GS+ D + N L I+ LEYLHF IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
K N+LL+ + A L+DFG+A L+ D R + T +MAP+ I
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVI 197
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 138
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 131
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 127
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRAR--LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI 779
LR +F E ++G G FG V +AR L+ K+ H + L + +E ++ ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASL 59
Query: 780 RH-------------RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
H RN VK +++ + +EY N +L D +HS N
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874
+ I AL Y+H S IIH DLKP N+ +DE + DFG+AK
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 733 IIGIGGFGSVYRARL----EDGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKI 787
IIG G G V RL + V +AIK + F +E ++ H N++++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-FGHSTP 846
+ +V EYM NGSL+ L + + I + ++ + + + YL G+
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY--- 172
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAPDEI 900
+H DL NVL+D ++V +SDFG++++L + D + T I + AP+ I
Sbjct: 173 -VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 733 IIGIGGFGSVYRARLE--DGVEIAIKVFHPQCASTLKS---FEAECEVIKNIRHRNLVKI 787
+IG+G FG V RL+ EI + + + T K F +E ++ H N++ +
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ ++ EYM NGSL+ L ++ + + ++ I S ++YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSY 131
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ-TLATIGYMAPDEI 900
+H DL N+L++ ++V +SDFGM+++L + E+ T+ I + AP+ I
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 733 IIGIGGFGSVYRARLE--DGVEIAIKVFHPQCASTLKS---FEAECEVIKNIRHRNLVKI 787
+IG+G FG V RL+ EI + + + T K F +E ++ H N++ +
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ ++ EYM NGSL+ L ++ + + ++ I S ++YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSY 137
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ-TLATIGYMAPDEI 900
+H DL N+L++ ++V +SDFGM+++L + E+ T+ I + AP+ I
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 733 IIGIGGFGSVYRARLE--DGVEIAIKVFHPQCASTLKS---FEAECEVIKNIRHRNLVKI 787
+IG+G FG V RL+ EI + + + T K F +E ++ H N++ +
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ ++ EYM NGSL+ L ++ + + ++ I S ++YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSA 152
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ-TLATIGYMAPDEI 900
+H DL N+L++ ++V +SDFGM+++L + E+ T+ I + AP+ I
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + I+G GG V+ AR L ++A+KV A S F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISSCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
H +V + ++ + +V+EY+ +L D +H+ + + I + IA A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG--- 893
+ L+F H IIH D+KP+N+++ + DFG+A+ ++ D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 894 YMAPDE 899
Y++P++
Sbjct: 185 YLSPEQ 190
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ + + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 720 ELLRATDNFAENNIIGIGGFGSVYRARL--EDG--VEIAIKVFHPQ--CASTLKSFEAEC 773
++L F ++G G FGSV A+L EDG V++A+K+ +S ++ F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKA------LVLEYMSNGSLEDCLHSSNCALNIF---- 823
+K H ++ K++ K ++L +M +G L L +S N F
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 824 -CRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGE 879
+ M+DIA +EYL S IH DL N +L EDM ++DFG++ K+ SG+
Sbjct: 137 QTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 28/191 (14%)
Query: 716 FSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQ-CAS--TLKSFEA 771
F +FE+LRA IG G FG V + D ++ A+K + Q C +++
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL----EDCLHSSNCALNIFCRLN 827
E ++++ + H LV + S +++ +V++ + G L + +H + +F
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF---- 120
Query: 828 IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+ ++ AL+YL + IIH D+KP N+LLDE H++DF +A +L E T T
Sbjct: 121 -ICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITT 173
Query: 888 TLATIGYMAPD 898
T YMAP+
Sbjct: 174 MAGTKPYMAPE 184
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
+G G FG V + ++AIK+ S F E +V+ N+ H LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
++ EYM+NG L + L L + D+ A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 854 PSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
N L+++ V +SDFG+++ + +DE T + + + P+ + + S K
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 733 IIGIGGFGSVYRARLEDGVE----IAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKI 787
+IG G FG V R RL+ + +AIK + F +E ++ H N++++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+N ++ E+M NG+L+ L ++ + + ++ IAS + YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 137
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA---TIGYMAPDEI 900
+H DL N+L++ ++V +SDFG+++ L T +L I + AP+ I
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP I
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPAII 210
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
L + N + + V+ + +G FA + + I+ + + P
Sbjct: 211 ------LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
L K+ S ++ +V+EY G + L R I EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + +E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
L K+ S ++ +V+EY G + L R I EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + I+G GG V+ AR L ++A+KV A S F E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 781 HRNLVKIISSCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
H +V + + + +V+EY+ +L D +H+ + + I + IA A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 143
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG--- 893
+ L+F H IIH D+KP+N+++ + DFG+A+ ++ D TQT A IG
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 201
Query: 894 YMAPDE 899
Y++P++
Sbjct: 202 YLSPEQ 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + I+G GG V+ AR L ++A+KV A S F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISSCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
H +V + + + +V+EY+ +L D +H+ + + I + IA A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 126
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG--- 893
+ L+F H IIH D+KP+N+++ + DFG+A+ ++ D TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 894 YMAPDE 899
Y++P++
Sbjct: 185 YLSPEQ 190
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 112/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+++D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 111/266 (41%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E + + +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +VLEY G + L R I EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAP--- 208
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 209 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 262
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 263 SSDLKDLLRNLLQV--DLTKRFGNLK 286
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 26/197 (13%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-EDGVEIAIKVF-------HPQCASTLKSFEAECE 774
A+N I IG GGFG V++ RL +D +AIK + + F+ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
++ N+ H N+VK+ N +V+E++ G L L + +L +M+DIA
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVL---LDED--MVAHLSDFGMAKLLSGEDESTMRTQTL 889
+EY+ + PI+H DL+ N+ LDE+ + A ++DFG++ + + L
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLL 187
Query: 890 ATIGYMAPDEIFVGELS 906
+MAP+ I E S
Sbjct: 188 GNFQWMAPETIGAEEES 204
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 43/271 (15%)
Query: 727 NFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFH--------PQCASTLKSFEAECEVIK 777
+ ++IG G V R G E A+K+ Q ++ E +++
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 778 NIR-HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL 836
+ H +++ +I S + F LV + M G L D L + AL+ +IM S L
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIM---RSLL 210
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMRTQTLATIGYM 895
E + F H+ I+H DLKP N+LLD++M LSDFG + L GE +R + T GY+
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLR-ELCGTPGYL 266
Query: 896 AP-------DEIFVG---ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSI 945
AP DE G E+ L W V+ +LL+G F + Q L+
Sbjct: 267 APEILKCSMDETHPGYGKEVDL--WA--------CGVILFTLLAGSPP-FWHRRQILMLR 315
Query: 946 FSLALECTMESPE---KRIDAKDTITRLLKI 973
+ + SPE + KD I+RLL++
Sbjct: 316 MIMEGQYQFSSPEWDDRSSTVKDLISRLLQV 346
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G+VY A + G E+AI+ + Q + E V++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 793 NDDFKALVLEYMSNGSLED-----CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
D +V+EY++ GSL D C+ A CR L+ L F HS +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--AVCR--------ECLQALEFLHSNQV 137
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
IH D+K N+LL D L+DFG ++ E + R++ + T +MAP+ +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 908 KR--WVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT--MESPEK 959
K W ++ + ++E GE + E L +++ +A T +++PEK
Sbjct: 196 KVDIWSLGIMAIEMIE--------GEPPYL--NENPLRALYLIATNGTPELQNPEK 241
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 170
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 290
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 291 KCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 28/189 (14%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFE-AECEVIKNIRHRNL 784
++ + +IG G FG VY+A+L D E +AIK K+F+ E ++++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRELQIMRKLDHCNI 75
Query: 785 VKI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASA 835
V++ SS D + LVL+Y+ H S I+ +L M + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRS 134
Query: 836 LEYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATI 892
L Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSR 186
Query: 893 GYMAPDEIF 901
Y AP+ IF
Sbjct: 187 YYRAPELIF 195
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+K GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKAFGNLK 285
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRH 781
++F N++G G F VYRA + G+E+AIK+ + A ++ + E ++ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
+++++ + + ++ LVLE NG + L + + + M I + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH- 129
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
S I+H DL SN+LL +M ++DFG+A L E + TL T Y++P+
Sbjct: 130 --SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---KHYTLCGTPNYISPE 182
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 169
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 289
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 290 KCWHPKAEMRPSFSELVSRISAIFSTF 316
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 270
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 271 KCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 187
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 188 YRAPELIF 195
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 89
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 148
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 149 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 200
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 201 YRAPELIF 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 81
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 140
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 141 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 192
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 193 YRAPELIF 200
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 95
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 154
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 155 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 206
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 207 YRAPELIF 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 187
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 188 YRAPELIF 195
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 169
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 170 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 221
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 222 YRAPELIF 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 28/189 (14%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFE-AECEVIKNIRHRNL 784
++ + +IG G FG VY+A+L D E +AIK K+F+ E ++++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRELQIMRKLDHCNI 75
Query: 785 VKI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASA 835
V++ SS D + LVL+Y+ H S I+ +L M + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRS 134
Query: 836 LEYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATI 892
L Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSR 186
Query: 893 GYMAPDEIF 901
Y AP+ IF
Sbjct: 187 YYRAPELIF 195
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 187
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 188 YRAPELIF 195
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 155
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 214
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 215 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 266
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 267 YRAPELIF 274
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 136
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 137 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 188
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 189 YRAPELIF 196
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 179/406 (44%), Gaps = 65/406 (16%)
Query: 201 LGYNNLSGAIPK-EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
LG N++ + + ++ +T LQ L + G + YL NL + N LT + P
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP 80
Query: 260 ATIFNMSTLKEIFLYNNSLSGSLPSRIDLA-LPNLEFLNLGINSFSGTIPSSITNASKLI 318
+ N++ L +I + NN ++ P LA L NL L L N + P + N + L
Sbjct: 81 --LKNLTKLVDILMNNNQIADITP----LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 132
Query: 319 LLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
LE+ SN+ S SA+ L +L+ + N +T P LAN L L + N
Sbjct: 133 RLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP-------LANLTTLERLDISSN 183
Query: 379 PLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFG 438
+ S + L+ +LE L IS P +G L+NL LSL GN L T
Sbjct: 184 KVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 236
Query: 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
L L LDLA N+++ P + L++L EL L N+IS S L LT+L L L
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNE 292
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ L+DI PIS NLK + + L NN+S P +
Sbjct: 293 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISP--VS 324
Query: 559 GLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS 604
L LQ + N++ S N+T++ L +N+IS P++
Sbjct: 325 SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA 368
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 18/218 (8%)
Query: 413 IGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDL 472
+ NL+ L+ + + N ++ P L L GL L FN I D + L+ LN L+L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLEL 136
Query: 473 NGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL-DGPISL 531
+ N IS S L LTSLQ LN SN+ T + P NL + DISSN + D +
Sbjct: 137 SSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLA 192
Query: 532 AIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLD 591
+ NL++++ + N +S P L L +L +SL N+L+ + ++T+L LD
Sbjct: 193 KLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 245
Query: 592 LSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
L+NN+IS P+S L+ L EL L N++ P G
Sbjct: 246 LANNQISNLAPLS--GLTKLTELKLGANQISNISPLAG 281
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 52/275 (18%)
Query: 188 SSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKL----------------- 230
S+LS LQ+L+ N ++ P + NLT L+R+ + +NK+
Sbjct: 145 SALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 231 -HGEIPQ--EIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
+ +I +G L NLD L L N L + T+ +++ L ++ L NN +S P
Sbjct: 203 TNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS-- 258
Query: 288 LALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIF 347
L L L LG N S P + + L LE+ N P I NL+NL ++
Sbjct: 259 -GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 313
Query: 348 FNNLTSSTP---------------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSI 388
FNN++ +P ++ +SSLAN + +L G N + P + I
Sbjct: 314 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRI 373
Query: 389 GNLSLSLERLNIAFCNISGN--IPKAIGNLSNLIV 421
L L+ + A N N IP + N++ ++
Sbjct: 374 TQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 408
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 164/382 (42%), Gaps = 67/382 (17%)
Query: 196 LQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255
L +++ N L+ P + NLT L I + NN++ P + L NL L L N +T
Sbjct: 65 LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT 120
Query: 256 GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLA----LPNLEFLNLGINSFSGTIPSSI 311
+ P + N++ L + L +N++S D++ L +L+ LN N + P +
Sbjct: 121 DIDP--LKNLTNLNRLELSSNTIS-------DISALSGLTSLQQLNFSSNQVTDLKP--L 169
Query: 312 TNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLR 371
N + L L++ SN S S + L NL+ I NN S LG L++L
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESL-IATNNQISDITPLGILTNL------D 220
Query: 372 YLGLGGNPLDGFLPSSIGNLS--LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNL 429
L L GN L IG L+ +L L++A IS P + L+ L L LG N +
Sbjct: 221 ELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 273
Query: 430 SGSIPVTFGGLQKLQGLDLAFNKLAGSIP--------------------DEICLLSRLNE 469
S P GL L L+L N+L P + L++L
Sbjct: 274 SNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 331
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L NK+S S L NLT++ +L+ G N+ + + P NL I ++ D
Sbjct: 332 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN----DQAW 383
Query: 530 SLAIGNLKAVVGIDLSRNNLSG 551
+ A N KA V I + N++G
Sbjct: 384 TNAPVNYKANVSIPNTVKNVTG 405
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 53/356 (14%)
Query: 168 HLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLIN 227
+L L + N P L +L ++ + N ++ P + NLT L ++L N
Sbjct: 61 YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 116
Query: 228 NKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
N++ P + L NL+ L+L N ++ + + + +++L+++ +N ++ P
Sbjct: 117 NQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP---- 168
Query: 288 LA-LPNLEFLNLGINSFSG-TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNL---- 341
LA L LE L++ N S ++ + +TN LI +N S P +G L NL
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITP--LGILTNLDELS 223
Query: 342 ----KLFDI----FFNNLTS---STPELGFLSSLANCKKLRYLGLGGNPLDGFLP----S 386
+L DI NLT + ++ L+ L+ KL L LG N + P +
Sbjct: 224 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLT 283
Query: 387 SIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGL 446
++ NL L+ +L +IS I NL NL L+L NN+S PV+ L KLQ L
Sbjct: 284 ALTNLELNENQLE----DIS-----PISNLKNLTYLTLYFNNISDISPVS--SLTKLQRL 332
Query: 447 DLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
NK++ + L+ +N L N+IS + L NLT + L L +T
Sbjct: 333 FFYNNKVSDV--SSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWT 384
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 114
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 173
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 174 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 225
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 226 YRAPELIF 233
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 112
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 171
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 172 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 223
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 224 YRAPELIF 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 84
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 143
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 144 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 195
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 196 YRAPELIF 203
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 147
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 148 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 199
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 200 YRAPELIF 207
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 147
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 148 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 199
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 200 YRAPELIF 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 187
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 188 YRAPELIF 195
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 80
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 139
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 140 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 191
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 192 YRAPELIF 199
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 772 ECEVIKNIRHRNLVKIISSCS--NDDFKALVLEYMSNGSLEDCLH----SSNCALNIFCR 825
E ++K + H N+VK++ N+D +V E ++ G + + S + A F
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF-- 143
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885
D+ +EYLH+ IIH D+KPSN+L+ ED ++DFG++ G D +
Sbjct: 144 ----QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--ALL 194
Query: 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS- 944
+ T+ T +MAP+ + + K + L V + V + G+ + CL S
Sbjct: 195 SNTVGTPAFMAPESL---SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251
Query: 945 IFSLALECTMESPEKRIDAKDTITRLL 971
I S ALE + P+ D KD ITR+L
Sbjct: 252 IKSQALEFP-DQPDIAEDLKDLITRML 277
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 169
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 170 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSRY 221
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 222 YRAPELIF 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-EDGVEIAIKVF-------HPQCASTLKSFEAECE 774
A+N I IG GGFG V++ RL +D +AIK + + F+ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
++ N+ H N+VK+ N +V+E++ G L L + +L +M+DIA
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVL---LDED--MVAHLSDFGMAKLLSGEDESTMRTQTL 889
+EY+ + PI+H DL+ N+ LDE+ + A ++DFG + + + L
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLL 187
Query: 890 ATIGYMAPDEIFVGELS 906
+MAP+ I E S
Sbjct: 188 GNFQWMAPETIGAEEES 204
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 21/195 (10%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI 779
+ R +D ++G G FG + E G + +K T ++F E +V++ +
Sbjct: 6 IFRPSD-LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL 64
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
H N++K I D + EY+ G+L + S + R++ DIAS + YL
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM-----------RTQT 888
HS IIH DL N L+ E+ ++DFG+A+L+ DE T R +
Sbjct: 125 ---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV--DEKTQPEGLRSLKKPDRKKR 179
Query: 889 LATIG---YMAPDEI 900
+G +MAP+ I
Sbjct: 180 YTVVGNPYWMAPEMI 194
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++ + +IG G FG VY+A+L D E +AIK + + E ++++ + H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 104
Query: 786 KI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASAL 836
++ SS D + LVL+Y+ H S I+ +L M + +L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 163
Query: 837 EYLH-FGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIG 893
Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 164 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY----ICSRY 215
Query: 894 YMAPDEIF 901
Y AP+ IF
Sbjct: 216 YRAPELIF 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+K+ +S+L+ E ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH--- 130
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG---YMAPDEI 900
I+H DLK N+LLD DM ++DFG + +E T + A G Y AP E+
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAP-EL 183
Query: 901 FVGE 904
F G+
Sbjct: 184 FQGK 187
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 178/406 (43%), Gaps = 65/406 (16%)
Query: 201 LGYNNLSGAIPK-EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
LG N++ + + ++ +T LQ L + G + YL NL + N LT + P
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP 80
Query: 260 ATIFNMSTLKEIFLYNNSLSGSLPSRIDLA-LPNLEFLNLGINSFSGTIPSSITNASKLI 318
+ N++ L +I + NN ++ P LA L NL L L N + P + N + L
Sbjct: 81 --LKNLTKLVDILMNNNQIADITP----LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 132
Query: 319 LLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
LE+ SN+ S SA+ L +L+ N +T P LAN L L + N
Sbjct: 133 RLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP-------LANLTTLERLDISSN 183
Query: 379 PLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFG 438
+ S + L+ +LE L IS P +G L+NL LSL GN L T
Sbjct: 184 KVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 236
Query: 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
L L LDLA N+++ P + L++L EL L N+IS S L LT+L L L
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNE 292
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ L+DI PIS NLK + + L NN+S P +
Sbjct: 293 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISP--VS 324
Query: 559 GLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS 604
L LQ + N++ S N+T++ L +N+IS P++
Sbjct: 325 SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA 368
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 18/218 (8%)
Query: 413 IGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDL 472
+ NL+ L+ + + N ++ P L L GL L FN I D + L+ LN L+L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLEL 136
Query: 473 NGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL-DGPISL 531
+ N IS S L LTSLQ L+ SN+ T + P NL + DISSN + D +
Sbjct: 137 SSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLA 192
Query: 532 AIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLD 591
+ NL++++ + N +S P L L +L +SL N+L+ + ++T+L LD
Sbjct: 193 KLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 245
Query: 592 LSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
L+NN+IS P+S L+ L EL L N++ P G
Sbjct: 246 LANNQISNLAPLS--GLTKLTELKLGANQISNISPLAG 281
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 161/378 (42%), Gaps = 61/378 (16%)
Query: 73 HKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQ 132
+ +T +N S+ L P + NL+ L + +++N+++ P + ++ L L L +NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 133 LSG--------SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYG 184
++ +L+ ++++I DI LSG L L+ L N
Sbjct: 119 ITDIDPLKNLTNLNRLELSSNTISDIS----ALSG---------LTSLQQLSFSSNQVTD 165
Query: 185 KIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNL 244
P L+ L+ L + N +S + LT L+ + NN++ P +G L NL
Sbjct: 166 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNL 219
Query: 245 DVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFS 304
D L L N L + T+ +++ L ++ L NN +S P L L L LG N S
Sbjct: 220 DELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS---GLTKLTELKLGANQIS 274
Query: 305 GTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTP-------- 356
P + + L LE+ N P I NL+NL ++FNN++ +P
Sbjct: 275 NISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQ 330
Query: 357 -------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSIGNLSLSLERLNIAFCNI 405
++ +SSLAN + +L G N + P + I L L+ + A N
Sbjct: 331 RLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNY 390
Query: 406 SGN--IPKAIGNLSNLIV 421
N IP + N++ ++
Sbjct: 391 KANVSIPNTVKNVTGALI 408
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 43/386 (11%)
Query: 168 HLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLIN 227
+L L + N P L +L ++ + N ++ P + NLT L ++L N
Sbjct: 61 YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 116
Query: 228 NKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
N++ P + L NL+ L+L N ++ + + + +++L+++ +N ++ P
Sbjct: 117 NQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP---- 168
Query: 288 LA-LPNLEFLNLGINSFSG-TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFD 345
LA L LE L++ N S ++ + +TN LI +N S P +G L NL
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITP--LGILTNLDELS 223
Query: 346 IFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNI 405
+ N L ++G L+SL N L L L N + P + L+ L L + I
Sbjct: 224 LNGNQL----KDIGTLASLTN---LTDLDLANNQISNLAP--LSGLT-KLTELKLGANQI 273
Query: 406 SGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLS 465
S P + L+ L L L N L P++ L+ L L L FN ++ P + L+
Sbjct: 274 SNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLT 327
Query: 466 RLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL 525
+L L NK+S S L NLT++ +L+ G N+ + + P NL I ++
Sbjct: 328 KLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN---- 379
Query: 526 DGPISLAIGNLKAVVGIDLSRNNLSG 551
D + A N KA V I + N++G
Sbjct: 380 DQAWTNAPVNYKANVSIPNTVKNVTG 405
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRH 781
D F +G G FG V + E G A+K+ Q LK E E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
LVK+ S ++ +V+EY++ G + L R I EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPDEI 900
S +I+ DLKP N+L+D+ ++DFG AK + G RT L T +AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEALAP--- 207
Query: 901 FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEK- 959
E+ L + N + + V+ + +G FA + + I+ + + P
Sbjct: 208 ---EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGKVRFPSHF 261
Query: 960 RIDAKDTITRLLKIRDTLSKRIGNLS 985
D KD + LL++ L+KR GNL
Sbjct: 262 SSDLKDLLRNLLQV--DLTKRFGNLK 285
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G+VY A + G E+AI+ + Q + E V++ ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 793 NDDFKALVLEYMSNGSLED-----CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
D +V+EY++ GSL D C+ A CR L+ L F HS +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--AVCR--------ECLQALEFLHSNQV 138
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
IH D+K N+LL D L+DFG ++ E + R+ + T +MAP+ +
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 908 KR--WVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT--MESPEK 959
K W ++ + ++E GE + E L +++ +A T +++PEK
Sbjct: 197 KVDIWSLGIMAIEMIE--------GEPPYL--NENPLRALYLIATNGTPELQNPEK 242
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G+VY A + G E+AI+ + Q + E V++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 793 NDDFKALVLEYMSNGSLED-----CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
D +V+EY++ GSL D C+ A CR L+ L F HS +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--AVCR--------ECLQALEFLHSNQV 137
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
IH D+K N+LL D L+DFG ++ E + R+ + T +MAP+ +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 908 KR--WVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT--MESPEK 959
K W ++ + ++E GE + E L +++ +A T +++PEK
Sbjct: 196 KVDIWSLGIMAIEMIE--------GEPPYL--NENPLRALYLIATNGTPELQNPEK 241
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVEIA----IKVFHPQCASTLKSFEA--ECEVIKNIR 780
+ + + +G G F +VY+AR ++ +I IK+ H A + A E ++++ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N++ ++ + + +LV ++M LE + ++ L M+ LEYLH
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
I+H DLKP+N+LLDE+ V L+DFG+AK + + + T Y AP+ +
Sbjct: 130 ---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTRWYRAPELL 184
Query: 901 F 901
F
Sbjct: 185 F 185
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G+VY A + G E+AI+ + Q + E V++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 793 NDDFKALVLEYMSNGSLED-----CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
D +V+EY++ GSL D C+ A CR L+ L F HS +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--AVCR--------ECLQALEFLHSNQV 137
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
IH D+K N+LL D L+DFG ++ E + R+ + T +MAP+ +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 908 KR--WVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT--MESPEK 959
K W ++ + ++E GE + E L +++ +A T +++PEK
Sbjct: 196 KVDIWSLGIMAIEMIE--------GEPPYL--NENPLRALYLIATNGTPELQNPEK 241
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G FG VY+A+ E G A KV + L+ + E E++ H +VK++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
+D +++E+ G+++ + + L I + LE L+F HS IIH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM--RTQTLATIGYMAPDEI 900
K NVL+ + L+DFG +S ++ T+ R + T +MAP+ +
Sbjct: 136 KAGNVLMTLEGDIRLADFG----VSAKNLKTLQKRDSFIGTPYWMAPEVV 181
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G FG VY+A+ E G A KV + L+ + E E++ H +VK++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
+D +++E+ G+++ + + L I + LE L+F HS IIH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM--RTQTLATIGYMAPDEI 900
K NVL+ + L+DFG +S ++ T+ R + T +MAP+ +
Sbjct: 144 KAGNVLMTLEGDIRLADFG----VSAKNLKTLQKRDSFIGTPYWMAPEVV 189
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSF 769
+EL R D +G G FG V A + ++A+K+ L
Sbjct: 64 WELPR--DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 121
Query: 770 EAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL---------HSSNCA 819
+E E++K I +H+N++ ++ +C+ D +++EY S G+L + L +S N +
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 820 LNIFCRLN------IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
N +L+ +A +EYL S IH DL NVL+ ED V ++DFG+A
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 874 KLLSGEDESTMRTQTLATIGYMAPDEIF 901
+ + D T + +MAP+ +F
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALF 266
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNC---------------ALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNC---------------ALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 28/189 (14%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLKSFE-AECEVIKNIRHRNL 784
++ + +IG G FG VY+A+L D E +AIK K+F+ E ++++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRELQIMRKLDHCNI 75
Query: 785 VKI----ISSCSNDD--FKALVLEYMSNGSLEDCLHSSNCALN---IFCRLNIMIDIASA 835
V++ SS D + LVL+Y+ H S I+ +L M + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRS 134
Query: 836 LEYLH-FGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAK-LLSGEDESTMRTQTLATI 892
L Y+H FG I H D+KP N+LLD D V L DFG AK L+ GE + + +
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX----ICSR 186
Query: 893 GYMAPDEIF 901
Y AP+ IF
Sbjct: 187 YYRAPELIF 195
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 709 SQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE-----DGVEIAIKVFHPQCA 763
S PT+ Y + +R +G G FG V + G +A+K C
Sbjct: 1 SDPTVFHKRYLKKIRD---------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCG 51
Query: 764 STLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKA--LVLEYMSNGSLEDCL--HSSNC 818
L+S ++ E E+++ + H ++VK C + K+ LV+EY+ GSL D L H
Sbjct: 52 PQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL 111
Query: 819 A-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL- 876
A L +F + I + YLH H IH L NVLLD D + + DFG+AK +
Sbjct: 112 AQLLLFAQ-----QICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVP 163
Query: 877 SGEDESTMRTQTLATIGYMAPD 898
G + +R + + + AP+
Sbjct: 164 EGHEYYRVREDGDSPVFWYAPE 185
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVF-------HPQCASTLKSFEAECEV 775
A + IG GGFG V++ RL +D +AIK + + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+ N+ H N+VK+ N +V+E++ G L L + +L +M+DIA
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 836 LEYLHFGHSTPIIHCDLKPSNVL---LDED--MVAHLSDFGMAKLLSGEDESTMRTQTLA 890
+EY+ + PI+H DL+ N+ LDE+ + A ++DF ++ + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLG 188
Query: 891 TIGYMAPDEIFVGELS 906
+MAP+ I E S
Sbjct: 189 NFQWMAPETIGAEEES 204
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 180/406 (44%), Gaps = 66/406 (16%)
Query: 201 LGYNNLSGAIPK-EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
LG N++ + + ++ +T LQ L + G + YL NL + N LT + P
Sbjct: 30 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP 84
Query: 260 ATIFNMSTLKEIFLYNNSLSGSLPSRIDLA-LPNLEFLNLGINSFSGTIPSSITNASKLI 318
+ N++ L +I + NN ++ P LA L NL L L N + P + N + L
Sbjct: 85 --LKNLTKLVDILMNNNQIADITP----LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 136
Query: 319 LLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
LE+ SN+ S SA+ L +L+ F N +T P LAN L L + N
Sbjct: 137 RLELSSNTISDI--SALSGLTSLQQLS-FGNQVTDLKP-------LANLTTLERLDISSN 186
Query: 379 PLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFG 438
+ S + L+ +LE L IS P +G L+NL LSL GN L T
Sbjct: 187 KVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 239
Query: 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
L L LDLA N+++ P + L++L EL L N+IS S L LT+L L L
Sbjct: 240 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNE 295
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ L+DI PIS NLK + + L NN+S P +
Sbjct: 296 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISP--VS 327
Query: 559 GLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS 604
L LQ + A N++ S N+T++ L +N+IS P++
Sbjct: 328 SLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA 371
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 53/275 (19%)
Query: 188 SSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKL----------------- 230
S+LS LQ+L G N ++ P + NLT L+R+ + +NK+
Sbjct: 149 SALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 205
Query: 231 -HGEIPQ--EIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
+ +I +G L NLD L L N L + T+ +++ L ++ L NN +S P
Sbjct: 206 TNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS-- 261
Query: 288 LALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIF 347
L L L LG N S P + + L LE+ N P I NL+NL ++
Sbjct: 262 -GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 316
Query: 348 FNNLTSSTP---------------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSI 388
FNN++ +P ++ +SSLAN + +L G N + P + I
Sbjct: 317 FNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRI 376
Query: 389 GNLSLSLERLNIAFCNISGN--IPKAIGNLSNLIV 421
L L+ + A N N IP + N++ ++
Sbjct: 377 TQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 411
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 39/253 (15%)
Query: 67 ICDVNS-HKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKV 125
I D+++ +T+L SF Q T +ANL++L+ LD+S NK+S S + ++ L+
Sbjct: 145 ISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLES 202
Query: 126 LYLMDNQLSG--------SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFL 177
L +NQ+S +L + N + + DI G L L L L L
Sbjct: 203 LIATNNQISDITPLGILTNLDELSLNGNQLKDI--------GTLA-----SLTNLTDLDL 249
Query: 178 RENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQE 237
N P LS +L EL LG N +S P + LT L + L N+L P
Sbjct: 250 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-- 303
Query: 238 IGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS--GSLPSRIDLALPNLEF 295
I L+NL L L FNN++ + P + +++ L+ +F NN +S SL + L N+ +
Sbjct: 304 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVSSLAN-----LTNINW 356
Query: 296 LNLGINSFSGTIP 308
L+ G N S P
Sbjct: 357 LSAGHNQISDLTP 369
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 415 NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNG 474
NL+ L+ + + N ++ P L L GL L FN I D + L+ LN L+L+
Sbjct: 87 NLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSS 142
Query: 475 NKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL-DGPISLAI 533
N IS S L LTSLQ L+ G N+ T + P NL + DISSN + D + +
Sbjct: 143 NTISDI--SALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKL 197
Query: 534 GNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLS 593
NL++++ + N +S P L L +L +SL N+L+ + ++T+L LDL+
Sbjct: 198 TNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 250
Query: 594 NNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
NN+IS P+S L+ L EL L N++ P G
Sbjct: 251 NNQISNLAPLS--GLTKLTELKLGANQISNISPLAG 284
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 196 LQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255
L +++ N L+ P + NLT L I + NN++ P + L NL L L N +T
Sbjct: 69 LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT 124
Query: 256 GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLA----LPNLEFLNLGINSFSGTIPSSI 311
+ P + N++ L + L +N++S D++ L +L+ L+ G N + P +
Sbjct: 125 DIDP--LKNLTNLNRLELSSNTIS-------DISALSGLTSLQQLSFG-NQVTDLKP--L 172
Query: 312 TNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLR 371
N + L L++ SN S S + L NL+ I NN S LG L++L
Sbjct: 173 ANLTTLERLDISSNKVSDI--SVLAKLTNLESL-IATNNQISDITPLGILTNL------D 223
Query: 372 YLGLGGNPLDGFLPSSIGNLS--LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNL 429
L L GN L IG L+ +L L++A IS P + L+ L L LG N +
Sbjct: 224 ELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 276
Query: 430 SGSIPVTFGGLQKLQGLDLAFNKLAGSIP--------------------DEICLLSRLNE 469
S P GL L L+L N+L P + L++L
Sbjct: 277 SNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 334
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L NK+S S L NLT++ +L+ G N+ + + P NL I ++ D
Sbjct: 335 LFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN----DQAW 386
Query: 530 SLAIGNLKAVVGIDLSRNNLSG 551
+ A N KA V I + N++G
Sbjct: 387 TNAPVNYKANVSIPNTVKNVTG 408
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 154/359 (42%), Gaps = 49/359 (13%)
Query: 150 IRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGA 209
I S N+L+ P +L L + + N P L+ L L L N ++
Sbjct: 72 INFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 126
Query: 210 IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQ-LGF-NNLTGVVPATIFNMST 267
P + NLT L R+ L +N + +I L L LQ L F N +T + P + N++T
Sbjct: 127 DP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP--LANLTT 177
Query: 268 LKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSF 327
L+ + + +N +S + L NLE L N S P I + L L + N
Sbjct: 178 LERLDISSNKVSDI---SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQL 232
Query: 328 SGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLP-- 385
+ +L NL D+ N ++ L+ L+ KL L LG N + P
Sbjct: 233 KDI--GTLASLTNLTDLDLANN-------QISNLAPLSGLTKLTELKLGANQISNISPLA 283
Query: 386 --SSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKL 443
+++ NL L+ +L +IS I NL NL L+L NN+S PV+ L KL
Sbjct: 284 GLTALTNLELNENQLE----DIS-----PISNLKNLTYLTLYFNNISDISPVS--SLTKL 332
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
Q L A NK++ + L+ +N L N+IS + L NLT + L L +T
Sbjct: 333 QRLFFANNKVSDV--SSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWT 387
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 733 IIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCASTLKSFEAECEVIKNIRHRNLVKI 787
+IG G FG V RL+ + +AIK + F E ++ H N++ +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ +V EYM NGSL+ L ++ + + ++ I++ ++YL
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS---DMGY 145
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ-TLATIGYMAPDEI 900
+H DL N+L++ ++V +SDFG++++L + E+ T+ I + AP+ I
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+K+ +S+L+ E ++K + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCH--- 123
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 180/406 (44%), Gaps = 66/406 (16%)
Query: 201 LGYNNLSGAIPK-EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
LG N++ + + ++ +T LQ L + G + YL NL + N LT + P
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP 80
Query: 260 ATIFNMSTLKEIFLYNNSLSGSLPSRIDLA-LPNLEFLNLGINSFSGTIPSSITNASKLI 318
+ N++ L +I + NN ++ P LA L NL L L N + P + N + L
Sbjct: 81 --LKNLTKLVDILMNNNQIADITP----LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 132
Query: 319 LLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
LE+ SN+ S SA+ L +L+ + F N +T P LAN L L + N
Sbjct: 133 RLELSSNTISDI--SALSGLTSLQQLN-FGNQVTDLKP-------LANLTTLERLDISSN 182
Query: 379 PLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFG 438
+ S + L+ +LE L IS P +G L+NL LSL GN L T
Sbjct: 183 KVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 235
Query: 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
L L LDLA N+++ P + L++L EL L N+IS S L LT+L L L
Sbjct: 236 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNE 291
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ L+DI PIS NLK + + L NN+S P +
Sbjct: 292 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISP--VS 323
Query: 559 GLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS 604
L LQ + N++ S N+T++ L +N+IS P++
Sbjct: 324 SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 19/218 (8%)
Query: 413 IGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDL 472
+ NL+ L+ + + N ++ P L L GL L FN I D + L+ LN L+L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLEL 136
Query: 473 NGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLA 532
+ N IS S L LTSLQ LN G N+ T + P NL + DISSN + LA
Sbjct: 137 SSNTISDI--SALSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLA 191
Query: 533 -IGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLD 591
+ NL++++ + N +S P L L +L +SL N+L+ + ++T+L LD
Sbjct: 192 KLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 244
Query: 592 LSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
L+NN+IS P+S L+ L EL L N++ P G
Sbjct: 245 LANNQISNLAPLS--GLTKLTELKLGANQISNISPLAG 280
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 39/253 (15%)
Query: 67 ICDVNS-HKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKV 125
I D+++ +T+L +F Q T +ANL++L+ LD+S NK+S S + ++ L+
Sbjct: 141 ISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLES 198
Query: 126 LYLMDNQLSG--------SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFL 177
L +NQ+S +L + N + + DI G L L L L L
Sbjct: 199 LIATNNQISDITPLGILTNLDELSLNGNQLKDI--------GTLA-----SLTNLTDLDL 245
Query: 178 RENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQE 237
N P LS +L EL LG N +S P + LT L + L N+L P
Sbjct: 246 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-- 299
Query: 238 IGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS--GSLPSRIDLALPNLEF 295
I L+NL L L FNN++ + P + +++ L+ +F YNN +S SL + L N+ +
Sbjct: 300 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLAN-----LTNINW 352
Query: 296 LNLGINSFSGTIP 308
L+ G N S P
Sbjct: 353 LSAGHNQISDLTP 365
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 118/275 (42%), Gaps = 53/275 (19%)
Query: 188 SSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKL----------------- 230
S+LS LQ+L+ G N ++ P + NLT L+R+ + +NK+
Sbjct: 145 SALSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 201
Query: 231 -HGEIPQ--EIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
+ +I +G L NLD L L N L + T+ +++ L ++ L NN +S P
Sbjct: 202 TNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS-- 257
Query: 288 LALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIF 347
L L L LG N S P + + L LE+ N P I NL+NL ++
Sbjct: 258 -GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 312
Query: 348 FNNLTSSTP---------------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSI 388
FNN++ +P ++ +SSLAN + +L G N + P + I
Sbjct: 313 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRI 372
Query: 389 GNLSLSLERLNIAFCNISGN--IPKAIGNLSNLIV 421
L L+ + A N N IP + N++ ++
Sbjct: 373 TQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 407
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 196 LQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255
L +++ N L+ P + NLT L I + NN++ P + L NL L L N +T
Sbjct: 65 LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT 120
Query: 256 GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLA----LPNLEFLNLGINSFSGTIPSSI 311
+ P + N++ L + L +N++S D++ L +L+ LN G N + P +
Sbjct: 121 DIDP--LKNLTNLNRLELSSNTIS-------DISALSGLTSLQQLNFG-NQVTDLKP--L 168
Query: 312 TNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLR 371
N + L L++ SN S S + L NL+ I NN S LG L++L
Sbjct: 169 ANLTTLERLDISSNKVSDI--SVLAKLTNLESL-IATNNQISDITPLGILTNL------D 219
Query: 372 YLGLGGNPLDGFLPSSIGNLS--LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNL 429
L L GN L IG L+ +L L++A IS P + L+ L L LG N +
Sbjct: 220 ELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 272
Query: 430 SGSIPVTFGGLQKLQGLDLAFNKLAGSIP--------------------DEICLLSRLNE 469
S P GL L L+L N+L P + L++L
Sbjct: 273 SNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 330
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L NK+S S L NLT++ +L+ G N+ + + P NL I ++ D
Sbjct: 331 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN----DQAW 382
Query: 530 SLAIGNLKAVVGIDLSRNNLSG 551
+ A N KA V I + N++G
Sbjct: 383 TNAPVNYKANVSIPNTVKNVTG 404
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 156/360 (43%), Gaps = 51/360 (14%)
Query: 150 IRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGA 209
I S N+L+ P +L L + + N P L+ L L L N ++
Sbjct: 68 INFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 122
Query: 210 IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQ-LGF-NNLTGVVPATIFNMST 267
P + NLT L R+ L +N + +I L L LQ L F N +T + P + N++T
Sbjct: 123 DP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLNFGNQVTDLKP--LANLTT 173
Query: 268 LKEIFLYNNSLSG-SLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNS 326
L+ + + +N +S S+ ++ L NLE L N S P I + L L + N
Sbjct: 174 LERLDISSNKVSDISVLAK----LTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQ 227
Query: 327 FSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLP- 385
+ +L NL D+ N ++ L+ L+ KL L LG N + P
Sbjct: 228 LKDI--GTLASLTNLTDLDLANN-------QISNLAPLSGLTKLTELKLGANQISNISPL 278
Query: 386 ---SSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQK 442
+++ NL L+ +L +IS I NL NL L+L NN+S PV+ L K
Sbjct: 279 AGLTALTNLELNENQLE----DIS-----PISNLKNLTYLTLYFNNISDISPVS--SLTK 327
Query: 443 LQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
LQ L NK++ + L+ +N L N+IS + L NLT + L L +T
Sbjct: 328 LQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWT 383
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 770 EAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM 829
E E E++K + H ++KI + +D+ +VLE M G L D + + C+L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 120
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRT 886
+ A++YLH IIH DLKP NVLL +ED + ++DFG +K+L + S MRT
Sbjct: 121 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT 175
Query: 887 QTLATIGYMAPDEIF-VGELSLKRWVN 912
T Y+AP+ + VG R V+
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVD 201
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 770 EAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM 829
E E E++K + H ++KI + +D+ +VLE M G L D + + C+L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 120
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRT 886
+ A++YLH IIH DLKP NVLL +ED + ++DFG +K+L + S MRT
Sbjct: 121 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT 175
Query: 887 QTLATIGYMAPDEIF-VGELSLKRWVN 912
T Y+AP+ + VG R V+
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVD 201
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 770 EAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM 829
E E E++K + H ++KI + +D+ +VLE M G L D + + C+L
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 119
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRT 886
+ A++YLH IIH DLKP NVLL +ED + ++DFG +K+L + S MRT
Sbjct: 120 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT 174
Query: 887 QTLATIGYMAPDEIF-VGELSLKRWVN 912
T Y+AP+ + VG R V+
Sbjct: 175 -LCGTPTYLAPEVLVSVGTAGYNRAVD 200
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 770 EAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM 829
E E E++K + H ++KI + +D+ +VLE M G L D + + C+L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 120
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRT 886
+ A++YLH IIH DLKP NVLL +ED + ++DFG +K+L + S MRT
Sbjct: 121 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT 175
Query: 887 QTLATIGYMAPDEIF-VGELSLKRWVN 912
T Y+AP+ + VG R V+
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVD 201
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN--IRHRN 783
DN +IG G +G+VY+ L D +A+KVF + ++F E + + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDN 68
Query: 784 LVKIISSCSNDDFKA-------LVLEYMSNGSLED--CLHSSNCALNIFCRLNIMIDIAS 834
+ + I ++ A LV+EY NGSL LH+S+ + CRL +
Sbjct: 69 IARFI--VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSS--CRL--AHSVTR 122
Query: 835 ALEYLHF-----GHSTPII-HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE------DES 882
L YLH H P I H DL NVL+ D +SDFG++ L+G +E
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 883 TMRTQTLATIGYMAPDEIFVGELSLK 908
+ TI YMAP E+ G ++L+
Sbjct: 183 NAAISEVGTIRYMAP-EVLEGAVNLR 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+K+ +S+L+ E ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH--- 130
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+K+ +S+L+ E ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH--- 130
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L H+ L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 213 RLPVKWMAPEALF 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 750 GVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKA--LVLEYMSN 806
G +A+K C L+S ++ E E+++ + H ++VK C + K+ LV+EY+
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 807 GSLEDCL--HSSNCA-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863
GSL D L H A L +F + I + YLH H IH L NVLLD D
Sbjct: 97 GSLRDYLPRHCVGLAQLLLFAQ-----QICEGMAYLHAQH---YIHRALAARNVLLDNDR 148
Query: 864 VAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPD 898
+ + DFG+AK + G + +R + + + AP+
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 708 SSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE-----DGVEIAIKVFHPQC 762
+S PT+ Y + +R +G G FG V + G +A+K C
Sbjct: 5 ASDPTVFHKRYLKKIRD---------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC 55
Query: 763 ASTLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKAL--VLEYMSNGSLEDCL--HSSN 817
+S ++ E ++++ + H +++K C + K+L V+EY+ GSL D L HS
Sbjct: 56 GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG 115
Query: 818 CA-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
A L +F + I + YLH H IH +L NVLLD D + + DFG+AK +
Sbjct: 116 LAQLLLFAQ-----QICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 877 -SGEDESTMRTQTLATIGYMAPD 898
G + +R + + + AP+
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPE 190
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRAR--LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI 779
LR +F E ++G G FG V +AR L+ K+ H + L + +E ++ ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVXLLASL 59
Query: 780 RH-------------RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
H RN VK ++ + EY N +L D +HS N
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874
+ I AL Y+H S IIH +LKP N+ +DE + DFG+AK
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 708 SSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE-----DGVEIAIKVFHPQC 762
+S PT+ Y + +R +G G FG V + G +A+K C
Sbjct: 5 ASDPTVFHKRYLKKIRD---------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC 55
Query: 763 ASTLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKAL--VLEYMSNGSLEDCL--HSSN 817
+S ++ E ++++ + H +++K C + K+L V+EY+ GSL D L HS
Sbjct: 56 GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG 115
Query: 818 CA-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
A L +F + I + YLH H IH +L NVLLD D + + DFG+AK +
Sbjct: 116 LAQLLLFAQ-----QICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 877 -SGEDESTMRTQTLATIGYMAPD 898
G + +R + + + AP+
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPE 190
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 725 TDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
+DN+ +G G F V R G+E A K+ + + A + E E + + ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S + F LV + ++ G L ED + A + + I LE +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIA 142
Query: 841 FGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ HS I+H +LKP N+LL + L+DFG+A + ++S T GY++P
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSP 199
Query: 898 D 898
+
Sbjct: 200 E 200
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 146
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 266
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 267 KCWHPKAEMRPSFSELVSRISAIFSTF 293
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARL--EDGVEI--AIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L DG +I A+K + + F E ++K+ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 210
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 330
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 331 KCWHPKAEMRPSFSELVSRISAIFSTF 357
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 269
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 270 KCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 270
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 271 KCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 732 NIIGIGGFGSVYRARLE-DGVEI--AIKVFHPQCAST-LKSFEAECEVIKNI-RHRNLVK 786
++IG G FG V +AR++ DG+ + AIK + + F E EV+ + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNIMID 831
++ +C + + L +EY +G+L D L +S+ L+ L+ D
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
+A ++YL IH DL N+L+ E+ VA ++DFG+++ G++ +T
Sbjct: 141 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLP 194
Query: 892 IGYMAPDEI 900
+ +MA + +
Sbjct: 195 VRWMAIESL 203
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 732 NIIGIGGFGSVYRARLE-DGVEI--AIKVFHPQCAST-LKSFEAECEVIKNI-RHRNLVK 786
++IG G FG V +AR++ DG+ + AIK + + F E EV+ + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNIMID 831
++ +C + + L +EY +G+L D L +S+ L+ L+ D
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
+A ++YL IH DL N+L+ E+ VA ++DFG+++ G++ +T
Sbjct: 151 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLP 204
Query: 892 IGYMAPDEI 900
+ +MA + +
Sbjct: 205 VRWMAIESL 213
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 151
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 271
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 733 IIGIGGFGSVYRAR-LEDG----VEIAIKVFHPQCASTLKSFEAECE---VIKNIRHRNL 784
++G G FG+V++ + +G + + IKV + S +SF+A + I ++ H ++
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
V+++ C + LV +Y+ GSL D + AL LN + IA + YL
Sbjct: 78 VRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---E 133
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGE 904
++H +L NVLL ++DFG+A LL +D+ + ++ I +MA + I G+
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 905 LSLKR--W-----VNDLLP--------VSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLA 949
+ + W V +L+ + L EV D LL E+ A + C + ++ +
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD--LLEKGER-LAQPQICTIDVYMVM 250
Query: 950 LECTM 954
++C M
Sbjct: 251 VKCWM 255
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 148
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 268
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 269 KCWHPKAEMRPSFSELVSRISAIFSTF 295
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 263
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 264 KCWHPKAEMRPSFSELVSRISAIFSTF 290
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 151
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 271
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 266 RLPVKWMAPEALF 278
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+IG G FG VY R V I + LK+F+ E + RH N+V + +C
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
+ A++ +L + + L++ I +I + YL H+ I+H DL
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDL 156
Query: 853 KPSNVLLDEDMVAHLSDFGM----AKLLSGEDESTMRTQTLATIGYMAPDEI 900
K NV D V ++DFG+ L +G E +R Q + ++AP+ I
Sbjct: 157 KSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN-GWLCHLAPEII 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR---------------LNI 828
++ ++ +C+ D +++EY S G+L + L + +C ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 213 RLPVKWMAPEALF 225
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR---------------LNI 828
++ ++ +C+ D +++EY S G+L + L + +C ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 198 RLPVKWMAPEALF 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+K+ ++L+ E ++K + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY 134
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 135 ---IVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 245/633 (38%), Gaps = 97/633 (15%)
Query: 75 VTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLS 134
+T LNL+ L+ S L SLD+ N +S P + LKVL L N+LS
Sbjct: 32 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 91
Query: 135 G-SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKC 193
S +F F T ++ ++ L N + ++ N F K
Sbjct: 92 QLSDKTFAFCT-NLTELHLMSNSIQK-----------------IKNNPFV--------KQ 125
Query: 194 KQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQN--LDVLQLGF 251
K L L L +N LS L LQ + L NNK+ +E+ N L L+L
Sbjct: 126 KNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSS 185
Query: 252 NNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSI 311
N + P + L +FL N L SL ++ L L N NL +++ + S+
Sbjct: 186 NQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 245
Query: 312 T----NASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANC 367
T + L +L++ N+ + + L L+ F + +NN+ + F SL
Sbjct: 246 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI-----QHLFSHSLHGL 300
Query: 368 KKLRYLGLGGNPLDGFLPSSIGNLSLS------------LERLNIAFCNISGNIPKAIGN 415
+RYL L F SI SL LE LN+ +I G
Sbjct: 301 FNVRYLNLKR----SFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTG 356
Query: 416 LSNLIVLSLGGN--NLSGSIPVTFGGLQK--LQGLDLAFNKLAGSIPDEICLLSRLNELD 471
L NL LSL + +L TF L L L+L NK++ D L L LD
Sbjct: 357 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 416
Query: 472 LN----GNKISGSISSCLGNLTSL-----QYLNLGSNRFTFV------------------ 504
L G +++G L N+ + +YL L N F V
Sbjct: 417 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 476
Query: 505 IPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLS--------GNIPTT 556
PS F L+++ D+S+N + + L+ + +DL NNL+ G
Sbjct: 477 SPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYF 536
Query: 557 LEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS-FEKLSYLKELN 615
L+GL L ++L N + E F ++ L+ +DL N + ++P S F LK LN
Sbjct: 537 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLN 595
Query: 616 LSFNKLKG-EIPRGGP-FANFTAESFMGNELLC 646
L N + E GP F N T N C
Sbjct: 596 LQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 628
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 417 SNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNK 476
+N+ VL+L N L F +L LD+ FN ++ P+ L L L+L N+
Sbjct: 30 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 89
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSN 523
+S T+L L+L SN + + F K++++ D+S N
Sbjct: 90 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 136
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+++ +S+L+ E ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH--- 130
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+++ +S+L+ E ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV+EY S G + D L + R I SA++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH--- 130
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKN 778
L + +NF + IG G +G VY+AR + G +A+K + + E ++K
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H N+VK++ ++ LV E++S L+D + +S AL I + L+
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS--ALTGIPLPLIKSYLFQLLQG 117
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMA 896
L F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y A
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRA 173
Query: 897 PDEIFVG 903
P EI +G
Sbjct: 174 P-EILLG 179
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+AIK+ ++L+ E ++K + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + L++EY S G + D L + R I SA++Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH--- 131
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG---YMAPDEI 900
I+H DLK N+LLD DM ++DFG + +E T+ + A G Y AP E+
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAP-EL 184
Query: 901 FVGE 904
F G+
Sbjct: 185 FQGK 188
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIK----VFHPQCASTLKSFEAECEVIKNIR 780
D + IG G +G V AR G ++AIK F + K E +++K+ +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFK 111
Query: 781 HRNLVKIIS----SCSNDDFKAL--VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
H N++ I + +FK++ VL+ M + L +HSS L + + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ-PLTLEHVRYFLYQLLR 169
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL--SGEDESTMRTQTLATI 892
L+Y+H S +IH DLKPSN+L++E+ + DFGMA+ L S + T+ +AT
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 893 GYMAPD 898
Y AP+
Sbjct: 227 WYRAPE 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L H+ L+ ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 148 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 205 RLPVKWMAPEALF 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L H+ L+ ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 145 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 202 RLPVKWMAPEALF 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L H+ L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 213 RLPVKWMAPEALF 225
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L H+ L+ ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 213 RLPVKWMAPEALF 225
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++A+K+ L +E E++K I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L H+ L+ ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ ED V ++DFG+A+ + D T
Sbjct: 149 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 206 RLPVKWMAPEALF 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G+VY A + G E+AI+ + Q + E V++ ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 793 NDDFKALVLEYMSNGSLED-----CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
D +V+EY++ GSL D C+ A CR L+ L F HS +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--AVCR--------ECLQALEFLHSNQV 138
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL 907
IH ++K N+LL D L+DFG ++ E + R+ + T +MAP+ +
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 908 KR--WVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECT--MESPEK 959
K W ++ + ++E GE + E L +++ +A T +++PEK
Sbjct: 197 KVDIWSLGIMAIEMIE--------GEPPYL--NENPLRALYLIATNGTPELQNPEK 242
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 694 RGKRGTMLSNDIILSSQPTIRRFSYFEL-----------LRATDNFAENNIIGIGGFGSV 742
+GKR + +N I S + F +F+L LR D + + +G G G V
Sbjct: 108 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEV 165
Query: 743 YRA-RLEDGVEIAIKVFHPQC--------ASTLKSFEAECEVIKNIRHRNLVKIISSCSN 793
A + ++AI++ + A + E E E++K + H ++KI +
Sbjct: 166 KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 225
Query: 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853
+D+ +VLE M G L D + + C+L + A++YLH IIH DLK
Sbjct: 226 EDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLH---ENGIIHRDLK 280
Query: 854 PSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
P NVLL +ED + ++DFG +K+L + S MRT T Y+AP+
Sbjct: 281 PENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT-LCGTPTYLAPE 325
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 702 SNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE----IAIKV 757
S++ ++ P R FELLR ++G GG+G V++ R G A+KV
Sbjct: 2 SSETSVNRGPEKIRPECFELLR---------VLGKGGYGKVFQVRKVTGANTGKIFAMKV 52
Query: 758 FHP----QCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL 813
+ A +AE +++ ++H +V +I + L+LEY+S G L L
Sbjct: 53 LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL 112
Query: 814 HSSNCAL-NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872
+ + C + +I+ AL +LH II+ DLKP N++L+ L+DFG+
Sbjct: 113 EREGIFMEDTACFY--LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Query: 873 AKLLSGEDESTMRTQTLATIGYMAPD 898
K + T+ TI YMAP+
Sbjct: 168 CK--ESIHDGTVTHXFCGTIEYMAPE 191
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIK----VFHPQCASTLKSFEAECEVIKNIR 780
D + IG G +G V AR G ++AIK F + K E +++K+ +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFK 112
Query: 781 HRNLVKIIS----SCSNDDFKAL--VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
H N++ I + +FK++ VL+ M + L +HSS L + + +
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ-PLTLEHVRYFLYQLLR 170
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL--SGEDESTMRTQTLATI 892
L+Y+H S +IH DLKPSN+L++E+ + DFGMA+ L S + T+ +AT
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 893 GYMAPD 898
Y AP+
Sbjct: 228 WYRAPE 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKN 778
L + +NF + IG G +G VY+AR + G +A+K + + E ++K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H N+VK++ ++ LV E++S L+D + +S AL I + L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS--ALTGIPLPLIKSYLFQLLQG 118
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMA 896
L F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y A
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRA 174
Query: 897 PDEIFVG 903
P EI +G
Sbjct: 175 P-EILLG 180
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 702 SNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE----IAIKV 757
S++ ++ P R FELLR ++G GG+G V++ R G A+KV
Sbjct: 2 SSETSVNRGPEKIRPECFELLR---------VLGKGGYGKVFQVRKVTGANTGKIFAMKV 52
Query: 758 FHP----QCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL 813
+ A +AE +++ ++H +V +I + L+LEY+S G L L
Sbjct: 53 LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL 112
Query: 814 HSSNCAL-NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872
+ + C + +I+ AL +LH II+ DLKP N++L+ L+DFG+
Sbjct: 113 EREGIFMEDTACFY--LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Query: 873 AKLLSGEDESTMRTQTLATIGYMAPD 898
K + T+ TI YMAP+
Sbjct: 168 CK--ESIHDGTVTHTFCGTIEYMAPE 191
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 688 VALALKRGKRGTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRA-R 746
+AL+L R K + D+ + Q Y + LR D + + +G G G V A
Sbjct: 106 IALSLSRNK--VFVFFDLTVDDQSV-----YPKALR--DEYIMSKTLGSGACGEVKLAFE 156
Query: 747 LEDGVEIAIKVFHPQC--------ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798
+ ++AI++ + A + E E E++K + H ++KI + +D+
Sbjct: 157 RKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-Y 215
Query: 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVL 858
+VLE M G L D + + C+L + A++YLH IIH DLKP NVL
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLH---ENGIIHRDLKPENVL 271
Query: 859 L---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L +ED + ++DFG +K+L + S MRT T Y+AP+
Sbjct: 272 LSSQEEDCLIKITDFGHSKILG--ETSLMRT-LCGTPTYLAPE 311
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQC--------ASTLKS 768
Y + LR D + + +G G G V A + ++AIK+ + A +
Sbjct: 10 YPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN 67
Query: 769 FEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNI 828
E E E++K + H ++KI + +D+ +VLE M G L D + + C+L
Sbjct: 68 VETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-Y 125
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMR 885
+ A++YLH IIH DLKP NVLL +ED + ++DFG +K+L + S MR
Sbjct: 126 FYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 180
Query: 886 TQTLATIGYMAPDEIF-VGELSLKRWVN 912
T T Y+AP+ + VG R V+
Sbjct: 181 T-LCGTPTYLAPEVLVSVGTAGYNRAVD 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 718 YFELL----RATDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFE 770
YF+ + R TD++ +G G F V R + E A K+ + + A + E
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 771 AECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIM 829
E + + ++H N+V++ S S + F LV + ++ G L ED + A + +
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-----AREYYSEADAS 133
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRT 886
I LE ++ H I+H DLKP N+LL + L+DFG+A + GE ++
Sbjct: 134 HCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF-- 191
Query: 887 QTLATIGYMAPD 898
T GY++P+
Sbjct: 192 GFAGTPGYLSPE 203
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 722 LRATDNFAENNIIGIGGFGSVY--RARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI 779
+R T F E ++G G F V+ + RL G A+K A S E E V+K I
Sbjct: 7 IRKTFIFME--VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKI 63
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
+H N+V + + LV++ +S G L D + L ++ + SA++YL
Sbjct: 64 KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYL 122
Query: 840 HFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
H I+H DLKP N+L +E+ ++DFG++K+ +++ + + T GY+A
Sbjct: 123 ---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVA 175
Query: 897 PD 898
P+
Sbjct: 176 PE 177
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G FG VY+A+ E V A KV + L+ + E +++ + H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
++ +++E+ + G+++ + L I + L+ L++ H IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM--RTQTLATIGYMAPDEIFVGELSLKR 909
K N+L D L+DFG +S ++ T+ R + T +MAP E+ + E S R
Sbjct: 162 KAGNILFTLDGDIKLADFG----VSAKNTRTIQRRDSFIGTPYWMAP-EVVMCETSKDR 215
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 246/633 (38%), Gaps = 97/633 (15%)
Query: 75 VTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLS 134
+T LNL+ L+ S L SLD+ N +S P + LKVL L N+LS
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 135 G-SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKC 193
S +F F T ++ ++ L N + ++ N F K
Sbjct: 87 QLSDKTFAFCT-NLTELHLMSNSIQK-----------------IKNNPFV--------KQ 120
Query: 194 KQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQN--LDVLQLGF 251
K L L L +N LS L LQ + L NNK+ +E+ N L L+L
Sbjct: 121 KNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSS 180
Query: 252 NNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSI 311
N + P + L +FL N L SL ++ L L N NL +++ + S+
Sbjct: 181 NQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240
Query: 312 T----NASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANC 367
T + L +L++ N+ + + L L+ F + +NN+ + F SL
Sbjct: 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI-----QHLFSHSLHGL 295
Query: 368 KKLRYLGLGGNPLDGFLPSSIGNLSLS------------LERLNIAFCNISGNIPKAIGN 415
+RYL L F SI SL LE LN+ +I G
Sbjct: 296 FNVRYLNLKR----SFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTG 351
Query: 416 LSNLIVLSLGGN--NLSGSIPVTFGGLQK--LQGLDLAFNKLAGSIPDEICLLSRLNELD 471
L NL LSL + +L TF L L L+L NK++ D L L LD
Sbjct: 352 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 411
Query: 472 LN----GNKISGSISSCLGNLTSL-----QYLNLGSNRFTFV------------------ 504
L G +++G L N+ + +YL L N F V
Sbjct: 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 471
Query: 505 IPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLS--------GNIPTT 556
PS F L+++ D+S+N + + L+ + +DL NNL+ G
Sbjct: 472 SPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYF 531
Query: 557 LEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS-FEKLSYLKELN 615
L+GL L ++L N + E F ++ L+ +DL N ++ ++P S F LK LN
Sbjct: 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLN 590
Query: 616 LSFNKLKG-EIPRGGP-FANFTAESFMGNELLC 646
L N + E GP F N T N C
Sbjct: 591 LQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 623
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 417 SNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNK 476
+N+ VL+L N L F +L LD+ FN ++ P+ L L L+L N+
Sbjct: 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSN 523
+S T+L L+L SN + + F K++++ D+S N
Sbjct: 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 131
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS-S 790
+IG G FG V++A+L + E+AIK + + E ++++ ++H N+V + +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 791 CSNDD-----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
SN D F LVLEY+ H + L I + + L L + HS
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLK-QTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 846 PIIHCDLKPSNVLLDEDM-VAHLSDFGMAK-LLSGEDESTMRTQTLATIGYMAPDEIF 901
I H D+KP N+LLD V L DFG AK L++GE + + + Y AP+ IF
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS----XICSRYYRAPELIF 214
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 179/406 (44%), Gaps = 66/406 (16%)
Query: 201 LGYNNLSGAIPK-EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
LG N++ + + ++ +T LQ L + G + YL NL + N LT + P
Sbjct: 31 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP 85
Query: 260 ATIFNMSTLKEIFLYNNSLSGSLPSRIDLA-LPNLEFLNLGINSFSGTIPSSITNASKLI 318
+ N++ L +I + NN ++ P LA L NL L L N + P + N + L
Sbjct: 86 --LKNLTKLVDILMNNNQIADITP----LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 137
Query: 319 LLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
LE+ SN+ S SA+ L +L+ F N +T P LAN L L + N
Sbjct: 138 RLELSSNTISDI--SALSGLTSLQQLS-FGNQVTDLKP-------LANLTTLERLDISSN 187
Query: 379 PLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFG 438
+ S + L+ +LE L IS P +G L+NL LSL GN L T
Sbjct: 188 KVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 240
Query: 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
L L LDLA N+++ P + L++L EL L N+IS S L LT+L L L
Sbjct: 241 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNE 296
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ L+DI PIS NLK + + L NN+S P +
Sbjct: 297 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISP--VS 328
Query: 559 GLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS 604
L LQ + N++ S N+T++ L +N+IS P++
Sbjct: 329 SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA 372
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 39/253 (15%)
Query: 67 ICDVNS-HKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKV 125
I D+++ +T+L SF Q T +ANL++L+ LD+S NK+S S + ++ L+
Sbjct: 146 ISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLES 203
Query: 126 LYLMDNQLSG--------SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFL 177
L +NQ+S +L + N + + DI G L L L L L
Sbjct: 204 LIATNNQISDITPLGILTNLDELSLNGNQLKDI--------GTLA-----SLTNLTDLDL 250
Query: 178 RENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQE 237
N P LS +L EL LG N +S P + LT L + L N+L P
Sbjct: 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-- 304
Query: 238 IGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS--GSLPSRIDLALPNLEF 295
I L+NL L L FNN++ + P + +++ L+ +F YNN +S SL + L N+ +
Sbjct: 305 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLAN-----LTNINW 357
Query: 296 LNLGINSFSGTIP 308
L+ G N S P
Sbjct: 358 LSAGHNQISDLTP 370
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 53/275 (19%)
Query: 188 SSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKL----------------- 230
S+LS LQ+L G N ++ P + NLT L+R+ + +NK+
Sbjct: 150 SALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 206
Query: 231 -HGEIPQ--EIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
+ +I +G L NLD L L N L + T+ +++ L ++ L NN +S P
Sbjct: 207 TNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS-- 262
Query: 288 LALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIF 347
L L L LG N S P + + L LE+ N P I NL+NL ++
Sbjct: 263 -GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317
Query: 348 FNNLTSSTP---------------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSI 388
FNN++ +P ++ +SSLAN + +L G N + P + I
Sbjct: 318 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRI 377
Query: 389 GNLSLSLERLNIAFCNISGN--IPKAIGNLSNLIV 421
L L+ + A N N IP + N++ ++
Sbjct: 378 TQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 412
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 415 NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNG 474
NL+ L+ + + N ++ P L L GL L FN I D + L+ LN L+L+
Sbjct: 88 NLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSS 143
Query: 475 NKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL-DGPISLAI 533
N IS S L LTSLQ L+ G N+ T + P NL + DISSN + D + +
Sbjct: 144 NTISDI--SALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKL 198
Query: 534 GNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLS 593
NL++++ + N +S P L L +L +SL N+L+ + ++T+L LDL+
Sbjct: 199 TNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 251
Query: 594 NNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
NN+IS P+S L+ L EL L N++ P G
Sbjct: 252 NNQISNLAPLS--GLTKLTELKLGANQISNISPLAG 285
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 196 LQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255
L +++ N L+ P + NLT L I + NN++ P + L NL L L N +T
Sbjct: 70 LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT 125
Query: 256 GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLA----LPNLEFLNLGINSFSGTIPSSI 311
+ P + N++ L + L +N++S D++ L +L+ L+ G N + P +
Sbjct: 126 DIDP--LKNLTNLNRLELSSNTIS-------DISALSGLTSLQQLSFG-NQVTDLKP--L 173
Query: 312 TNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLR 371
N + L L++ SN S S + L NL+ I NN S LG L++L
Sbjct: 174 ANLTTLERLDISSNKVSDI--SVLAKLTNLESL-IATNNQISDITPLGILTNL------D 224
Query: 372 YLGLGGNPLDGFLPSSIGNLS--LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNL 429
L L GN L IG L+ +L L++A IS P + L+ L L LG N +
Sbjct: 225 ELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 277
Query: 430 SGSIPVTFGGLQKLQGLDLAFNKLAGSIP--------------------DEICLLSRLNE 469
S P GL L L+L N+L P + L++L
Sbjct: 278 SNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 335
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L NK+S S L NLT++ +L+ G N+ + + P NL I ++ D
Sbjct: 336 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN----DQAW 387
Query: 530 SLAIGNLKAVVGIDLSRNNLSG 551
+ A N KA V I + N++G
Sbjct: 388 TNAPVNYKANVSIPNTVKNVTG 409
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 153/359 (42%), Gaps = 49/359 (13%)
Query: 150 IRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGA 209
I S N+L+ P +L L + + N P L+ L L L N ++
Sbjct: 73 INFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 127
Query: 210 IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQ-LGF-NNLTGVVPATIFNMST 267
P + NLT L R+ L +N + +I L L LQ L F N +T + P + N++T
Sbjct: 128 DP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP--LANLTT 178
Query: 268 LKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSF 327
L+ + + +N +S + L NLE L N S P I + L L + N
Sbjct: 179 LERLDISSNKVSDI---SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQL 233
Query: 328 SGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLP-- 385
+ +L NL D+ N ++ L+ L+ KL L LG N + P
Sbjct: 234 KDI--GTLASLTNLTDLDLANN-------QISNLAPLSGLTKLTELKLGANQISNISPLA 284
Query: 386 --SSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKL 443
+++ NL L+ +L +IS I NL NL L+L NN+S PV+ L KL
Sbjct: 285 GLTALTNLELNENQLE----DIS-----PISNLKNLTYLTLYFNNISDISPVS--SLTKL 333
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
Q L NK++ + L+ +N L N+IS + L NLT + L L +T
Sbjct: 334 QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWT 388
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 245/633 (38%), Gaps = 97/633 (15%)
Query: 75 VTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLS 134
+T LNL+ L+ S L SLD+ N +S P + LKVL L N+LS
Sbjct: 37 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 96
Query: 135 G-SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKC 193
S +F F T ++ ++ L N + ++ N F K
Sbjct: 97 QLSDKTFAFCT-NLTELHLMSNSIQK-----------------IKNNPFV--------KQ 130
Query: 194 KQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQN--LDVLQLGF 251
K L L L +N LS L LQ + L NNK+ +E+ N L L+L
Sbjct: 131 KNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSS 190
Query: 252 NNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSI 311
N + P + L +FL N L SL ++ L L N NL +++ + S+
Sbjct: 191 NQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 250
Query: 312 T----NASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANC 367
T + L +L++ N+ + + L L+ F + +NN+ + F SL
Sbjct: 251 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI-----QHLFSHSLHGL 305
Query: 368 KKLRYLGLGGNPLDGFLPSSIGNLSLS------------LERLNIAFCNISGNIPKAIGN 415
+RYL L F SI SL LE LN+ +I G
Sbjct: 306 FNVRYLNLKR----SFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTG 361
Query: 416 LSNLIVLSLGGN--NLSGSIPVTFGGLQK--LQGLDLAFNKLAGSIPDEICLLSRLNELD 471
L NL LSL + +L TF L L L+L NK++ D L L LD
Sbjct: 362 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 421
Query: 472 LN----GNKISGSISSCLGNLTSL-----QYLNLGSNRFTFV------------------ 504
L G +++G L N+ + +YL L N F V
Sbjct: 422 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 481
Query: 505 IPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLS--------GNIPTT 556
PS F L+++ D+S+N + + L+ + +DL NNL+ G
Sbjct: 482 SPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYF 541
Query: 557 LEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS-FEKLSYLKELN 615
L+GL L ++L N + E F ++ L+ +DL N + ++P S F LK LN
Sbjct: 542 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLN 600
Query: 616 LSFNKLKG-EIPRGGP-FANFTAESFMGNELLC 646
L N + E GP F N T N C
Sbjct: 601 LQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 633
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 417 SNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNK 476
+N+ VL+L N L F +L LD+ FN ++ P+ L L L+L N+
Sbjct: 35 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 94
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSN 523
+S T+L L+L SN + + F K++++ D+S N
Sbjct: 95 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 141
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 207 RLPVKWMAPEALF 219
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 212 RLPVKWMAPEALF 224
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++EY S G+L + L + + ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 209 RLPVKWMAPEALF 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 725 TDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
+DN+ +G G F V R G+E A K+ + + A + E E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S + F LV + ++ G L ED + A + + I LE +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIA 119
Query: 841 FGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ HS I+H +LKP N+LL + L+DFG+A + ++S T GY++P
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSP 176
Query: 898 D 898
+
Sbjct: 177 E 177
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 725 TDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
+DN+ +G G F V R G+E A K+ + + A + E E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S + F LV + ++ G L ED + A + + I LE +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIA 118
Query: 841 FGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ HS I+H +LKP N+LL + L+DFG+A + ++S T GY++P
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSP 175
Query: 898 D 898
+
Sbjct: 176 E 176
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 725 TDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
+DN+ +G G F V R G+E A K+ + + A + E E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S + F LV + ++ G L ED + A + + I LE +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIA 119
Query: 841 FGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ HS I+H +LKP N+LL + L+DFG+A + ++S T GY++P
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSP 176
Query: 898 D 898
+
Sbjct: 177 E 177
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+AIK+ ++L+ E ++K + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + L++EY S G + D L + R I SA++Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH--- 128
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873
I+H DLK N+LLD DM ++DFG +
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 151
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 271
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHR 782
N+ +G G FG V A G ++A+K+ + + + E E ++ +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+++K+ + D +V+EY N + + + R I SA+EY H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH-- 129
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
I+H DLKP N+LLDE + ++DFG++ +++ D + ++T + + Y AP E+
Sbjct: 130 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP-EVIS 184
Query: 903 GEL 905
G+L
Sbjct: 185 GKL 187
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 269
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 270 KCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 151
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 271
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 15/178 (8%)
Query: 733 IIGIGGFGSVYRARLE----DGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKI 787
+IG G FG V L+ + +AIK + F +E ++ H N++ +
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ ++ E+M NGSL+ L ++ + + ++ IA+ ++YL
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNY 156
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA-----TIGYMAPDEI 900
+H DL N+L++ ++V +SDFG+++ L ED+++ T T A I + AP+ I
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAI 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHR 782
N+ +G G FG V A G ++A+K+ + + + E E ++ +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+++K+ + D +V+EY N + + + R I SA+EY H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH-- 130
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
I+H DLKP N+LLDE + ++DFG++ +++ D + ++T + + Y AP E+
Sbjct: 131 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP-EVIS 185
Query: 903 GEL 905
G+L
Sbjct: 186 GKL 188
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 732 NIIGIGGFGSVYRARLE-DGVEI--AIKVFHPQCAST-LKSFEAECEVIKNI-RHRNLVK 786
++IG G FG V +AR++ DG+ + AIK + + F E EV+ + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCALNIFCRLNIMID 831
++ +C + + L +EY +G+L D L +S+ L+ L+ D
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
+A ++YL IH +L N+L+ E+ VA ++DFG+++ G++ +T
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLP 201
Query: 892 IGYMAPDEI 900
+ +MA + +
Sbjct: 202 VRWMAIESL 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 727 NFAENNIIGIGGFGSVYRARL------EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI 779
N +G G FG V +A +A+K+ + S L+ +E V+K +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL-----------------------HSS 816
H +++K+ +CS D L++EY GSL L H
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 817 NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
AL + ++ I+ ++YL ++H DL N+L+ E +SDFG+++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 877 SGEDESTMRTQTLATIGYMAPDEIF 901
ED R+Q + +MA + +F
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLF 225
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 152
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 272
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 273 KCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 156
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 276
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 277 KCWHPKAEMRPSFSELVSRISAIFSTF 303
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 727 NFAENNIIGIGGFGSVYRARL------EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI 779
N +G G FG V +A +A+K+ + S L+ +E V+K +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL-----------------------HSS 816
H +++K+ +CS D L++EY GSL L H
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 817 NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
AL + ++ I+ ++YL ++H DL N+L+ E +SDFG+++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 877 SGEDESTMRTQTLATIGYMAPDEIF 901
ED R+Q + +MA + +F
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLF 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 733 IIGIGGFGSVYRARLE----DGVEIAIKVFH-PQCASTLKSFEAECEVIKNIRHRNLVKI 787
+IG G FG V RL+ V +AIK + F E ++ H N+V +
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL-HFGHSTP 846
+ +V+E+M NG+L+ L + + + ++ IA+ + YL G+
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY--- 166
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
+H DL N+L++ ++V +SDFG+++++ + E+ T
Sbjct: 167 -VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 726 DNFAENNIIGIGGFGSVYRARL----EDGVEIAIKVFHP----QCASTLKSFEAECEVIK 777
+NF ++G G +G V+ R + G A+KV Q A T + E +V++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 778 NIRHRNLVKIISSCSNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI-DIASA 835
+IR + + + K L+L+Y++ G L H S + I + +I A
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895
LE+LH II+ D+K N+LLD + L+DFG++K DE+ TI YM
Sbjct: 172 LEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYM 227
Query: 896 APDEIFVGE 904
APD + G+
Sbjct: 228 APDIVRGGD 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
TD + +G G F V R ++ G E A K+ + + A + E E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S S + F LV + ++ G L ED + A + + I LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-----AREYYSEADASHCIQQILESVN 117
Query: 841 FGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
H I+H DLKP N+LL + L+DFG+A + G+ ++ T GY++P
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSP 175
Query: 898 D 898
+
Sbjct: 176 E 176
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
TD + +G G F V R ++ G E A K+ + + A + E E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S S + F LV + ++ G L ED + A + + I LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-----AREYYSEADASHCIQQILESVN 117
Query: 841 FGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
H I+H DLKP N+LL + L+DFG+A + G+ ++ T GY++P
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSP 175
Query: 898 D 898
+
Sbjct: 176 E 176
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 731 NNIIGIGGFGSVYRARLEDG----VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLV 785
N +IG G FG VY L D + A+K + + F E ++K+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 786 KIISSCSNDDFKALV-LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
++ C + LV L YM +G L + + + + + + +A +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 152
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT--IGYMAPDEIFV 902
+H DL N +LDE ++DFG+A+ + ++ ++ +T A + +MA + +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 903 GELSLKR--WVNDLL----------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL 950
+ + K W +L P V D ++ + + E C ++ + L
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 272
Query: 951 ECTMESPEKRIDAKDTITRLLKIRDTL 977
+C E R + ++R+ I T
Sbjct: 273 KCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+D + +S AL I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 172
Query: 899 EIFVG 903
EI +G
Sbjct: 173 EILLG 177
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 727 NFAENNIIGIGGFGSVYRARL------EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI 779
N +G G FG V +A +A+K+ + S L+ +E V+K +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL-----------------------HSS 816
H +++K+ +CS D L++EY GSL L H
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 817 NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
AL + ++ I+ ++YL ++H DL N+L+ E +SDFG+++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 877 SGEDESTMRTQTLATIGYMAPDEIF 901
ED R+Q + +MA + +F
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLF 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRH 781
TD + IG G F V R +L G E A K+ + + A + E E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N+V++ S S + F LV + ++ G L ED + A + + I LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-----AREYYSEADASHCIQQILEAVL 117
Query: 841 FGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
H ++H DLKP N+LL + L+DFG+A + G+ ++ T GY++P
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSP 175
Query: 898 D 898
+
Sbjct: 176 E 176
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++ Y S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 733 IIG-IGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
IIG +G FG VY+A+ E V A KV + L+ + E +++ + H N+VK++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHC 850
++ +++E+ + G+++ + L I + L+ L++ H IIH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 851 DLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM---RTQTLATIGYMAPDEIFVGELSL 907
DLK N+L D L+DFG +S ++ T R + T +MAP E+ + E S
Sbjct: 133 DLKAGNILFTLDGDIKLADFG----VSAKNTRTXIQRRDSFIGTPYWMAP-EVVMCETSK 187
Query: 908 KR 909
R
Sbjct: 188 DR 189
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G FG VY+A+ E V A KV + L+ + E +++ + H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
++ +++E+ + G+++ + L I + L+ L++ H IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
K N+L D L+DFG++ R + T +MAP E+ + E S R
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAP-EVVMCETSKDR 215
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 18/218 (8%)
Query: 413 IGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDL 472
+ NL+ L+ + + N ++ P L L GL L FN I D + L+ LN L+L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLEL 136
Query: 473 NGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLA 532
+ N IS S L LTSLQ L+ SN+ T + P NL + DISSN + LA
Sbjct: 137 SSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLA 192
Query: 533 -IGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLD 591
+ NL++++ + N +S P L L +L +SL N+L+ + ++T+L LD
Sbjct: 193 KLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 245
Query: 592 LSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGG 629
L+NN+IS P+S L+ L EL L N++ P G
Sbjct: 246 LANNQISNLAPLS--GLTKLTELKLGANQISNISPLAG 281
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 161/378 (42%), Gaps = 61/378 (16%)
Query: 73 HKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQ 132
+ +T +N S+ L P + NL+ L + +++N+++ P + ++ L L L +NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 133 LSG--------SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYG 184
++ +L+ ++++I DI LSG L L+ L N
Sbjct: 119 ITDIDPLKNLTNLNRLELSSNTISDIS----ALSG---------LTSLQQLSFSSNQVTD 165
Query: 185 KIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNL 244
P L+ L+ L + N +S + LT L+ + NN++ P +G L NL
Sbjct: 166 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNL 219
Query: 245 DVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFS 304
D L L N L + T+ +++ L ++ L NN +S P L L L LG N S
Sbjct: 220 DELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS---GLTKLTELKLGANQIS 274
Query: 305 GTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTP-------- 356
P + + L LE+ N P I NL+NL ++FNN++ +P
Sbjct: 275 NISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQ 330
Query: 357 -------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSIGNLSLSLERLNIAFCNI 405
++ +SSLAN + +L G N + P + I L L+ + A N
Sbjct: 331 RLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNY 390
Query: 406 SGN--IPKAIGNLSNLIV 421
N IP + N++ ++
Sbjct: 391 KANVSIPNTVKNVTGALI 408
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 184/443 (41%), Gaps = 93/443 (20%)
Query: 201 LGYNNLSGAIPK-EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
LG N++ + + ++ +T LQ L + G + YL NL + N LT + P
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP 80
Query: 260 ATIFNMSTLKEIFLYNNSLSGSLPSRIDLA-LPNLEFLNLGINSFSGTIPSSITNASKLI 318
+ N++ L +I + NN ++ P LA L NL L L N + P + N + L
Sbjct: 81 --LKNLTKLVDILMNNNQIADITP----LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 132
Query: 319 LLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
LE+ SN+ S SA+ L +L+ N +T P LAN L L + N
Sbjct: 133 RLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP-------LANLTTLERLDISSN 183
Query: 379 PLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFG 438
+ S + L+ +LE L IS P +G L+NL LSL GN L T
Sbjct: 184 KVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 236
Query: 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
L L LDLA N+++ P + L++L EL L N+IS S L LT+L L L
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNE 292
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ L+DI PIS
Sbjct: 293 NQ-----------LEDI-----------SPIS---------------------------- 302
Query: 559 GLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSF 618
LK+L ++L +N + P S ++T L+ L SNNK+S S L+ + L+
Sbjct: 303 NLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGH 358
Query: 619 NKLKGEIPRGGPFANFTAESFMG 641
N +I P AN T + +G
Sbjct: 359 N----QISDLTPLANLTRITQLG 377
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 43/386 (11%)
Query: 168 HLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLIN 227
+L L + N P L +L ++ + N ++ P + NLT L ++L N
Sbjct: 61 YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 116
Query: 228 NKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
N++ P + L NL+ L+L N ++ + + + +++L+++ +N ++ P
Sbjct: 117 NQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP---- 168
Query: 288 LA-LPNLEFLNLGINSFSG-TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFD 345
LA L LE L++ N S ++ + +TN LI +N S P +G L NL
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITP--LGILTNLDELS 223
Query: 346 IFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNI 405
+ N L ++G L+SL N L L L N + P + L+ L L + I
Sbjct: 224 LNGNQL----KDIGTLASLTN---LTDLDLANNQISNLAP--LSGLT-KLTELKLGANQI 273
Query: 406 SGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLS 465
S P + L+ L L L N L P++ L+ L L L FN ++ P + L+
Sbjct: 274 SNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLT 327
Query: 466 RLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL 525
+L L + NK+S S L NLT++ +L+ G N+ + + P NL I ++
Sbjct: 328 KLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN---- 379
Query: 526 DGPISLAIGNLKAVVGIDLSRNNLSG 551
D + A N KA V I + N++G
Sbjct: 380 DQAWTNAPVNYKANVSIPNTVKNVTG 405
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAI 755
RG+ ++ + P + R F++ N + IG G +G V A + V +AI
Sbjct: 17 RGSHMAAAAAAGAGPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAI 73
Query: 756 KVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN---- 806
K P C TL+ E +++ RH N++ I ND +A +E M +
Sbjct: 74 KKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMKDVYLV 124
Query: 807 -----GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE 861
L L + + + + C + I L+Y+H S ++H DLKPSN+LL+
Sbjct: 125 THLMGADLYKLLKTQHLSNDHICYF--LYQILRGLKYIH---SANVLHRDLKPSNLLLNT 179
Query: 862 DMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAPD 898
+ DFG+A++ + D + T+ +AT Y AP+
Sbjct: 180 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
+G G FG VY+A+ E V A KV + L+ + E +++ + H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
++ +++E+ + G+++ + L I + L+ L++ H IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR 909
K N+L D L+DFG++ R + T +MAP E+ + E S R
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAP-EVVMCETSKDR 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 734 IGIGGFGSVYRA--------RLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNI-RHRN 783
+G G FG V A + ++ V +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------------LNIFCRLNI 828
++ ++ +C+ D +++ Y S G+L + L + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+A +EYL S IH DL NVL+ E+ V ++DFG+A+ ++ D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 889 LATIGYMAPDEIF 901
+ +MAP+ +F
Sbjct: 220 RLPVKWMAPEALF 232
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE--IAIKVFH-PQCASTLKSFEAECE 774
YF+ + + F + IG G FG V++ +++ + +AIK+ + ++ + E
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 77
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
V+ + K S D +++EY+ GS D L L+ I+ +I
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILK 135
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L+YLH S IH D+K +NVLL E L+DFG+A L+ D R + T +
Sbjct: 136 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFW 190
Query: 895 MAPDEI 900
MAP+ I
Sbjct: 191 MAPEVI 196
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 788 ISSCSNDDFKALVLEYMSN------------GSLEDCLHSSNCALNIFCRLNIMIDIASA 835
ND +A +E M + L C H SN + F + I
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF-----LYQILRG 140
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGY 894
L+Y+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 895 MAPD 898
AP+
Sbjct: 198 RAPE 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHR 782
N+ +G G FG V A G ++A+K+ + + + E E ++ +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+++K+ + D +V+EY N + + + R I SA+EY H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH-- 120
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
I+H DLKP N+LLDE + ++DFG++ +++ D + ++T + + Y AP E+
Sbjct: 121 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP-EVIS 175
Query: 903 GEL 905
G+L
Sbjct: 176 GKL 178
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHR 782
N+ +G G FG V A G ++A+K+ + + + E E ++ +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+++K+ + D +V+EY N + + + R I SA+EY H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH-- 124
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
I+H DLKP N+LLDE + ++DFG++ +++ D + ++T + + Y AP E+
Sbjct: 125 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP-EVIS 179
Query: 903 GEL 905
G+L
Sbjct: 180 GKL 182
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVF-HPQCASTLKSFE-AECEVIKNIRHRNLVKIISS 790
IG G +G V++ R D G +AIK F + +K E ++K ++H NLV ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR---LNIMIDIA-SALEYLHFGHSTP 846
LV EY C H+ L+ + R +++ I L+ ++F H
Sbjct: 71 FRRKRRLHLVFEY--------CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGE 904
IH D+KP N+L+ + V L DFG A+LL+G S +AT Y +P E+ VG+
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTG--PSDYYDDEVATRWYRSP-ELLVGD 177
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRN 783
N+ IG G F V AR + G E+A+K+ +S+L+ E + K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
+VK+ + LV EY S G + D L + R I SA++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCH--- 130
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG---YMAPDEI 900
I+H DLK N+LLD D ++DFG + +E T + A G Y AP E+
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAP-EL 183
Query: 901 FVGE 904
F G+
Sbjct: 184 FQGK 187
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 37/352 (10%)
Query: 290 LPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFN 349
L NL +N N + P + N +KL+ + M +N + P + NL NL +F N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 350 NLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNI 409
+T P L N L L L N + S++ L+ SL++LN F N ++
Sbjct: 118 QITDIDP-------LKNLTNLNRLELSSNTISDI--SALSGLT-SLQQLN--FGNQVTDL 165
Query: 410 PKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNE 469
K + NL+ L L + N +S I V L L+ L N+++ P + +L+ L+E
Sbjct: 166 -KPLANLTTLERLDISSNKVS-DISV-LAKLTNLESLIATNNQISDITP--LGILTNLDE 220
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L LNGN++ L +LT+L L+L +N+ + + P L + + +N +
Sbjct: 221 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS 276
Query: 530 SLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLES 589
LA L A+ ++L+ N L P + LK+L ++L +N + P S ++T L+
Sbjct: 277 PLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQR 330
Query: 590 LDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAESFMG 641
L SNNK+S S L+ + L+ N +I P AN T + +G
Sbjct: 331 LFFSNNKVSDV--SSLANLTNINWLSAGHN----QISDLTPLANLTRITQLG 376
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 118/275 (42%), Gaps = 53/275 (19%)
Query: 188 SSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKL----------------- 230
S+LS LQ+L+ G N ++ P + NLT L+R+ + +NK+
Sbjct: 145 SALSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 201
Query: 231 -HGEIPQ--EIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287
+ +I +G L NLD L L N L + T+ +++ L ++ L NN +S P
Sbjct: 202 TNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLS-- 257
Query: 288 LALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIF 347
L L L LG N S P + + L LE+ N P I NL+NL ++
Sbjct: 258 -GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 312
Query: 348 FNNLTSSTP---------------ELGFLSSLANCKKLRYLGLGGNPLDGFLP----SSI 388
FNN++ +P ++ +SSLAN + +L G N + P + I
Sbjct: 313 FNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRI 372
Query: 389 GNLSLSLERLNIAFCNISGN--IPKAIGNLSNLIV 421
L L+ + A N N IP + N++ ++
Sbjct: 373 TQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 407
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 39/253 (15%)
Query: 67 ICDVNS-HKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKV 125
I D+++ +T+L +F Q T +ANL++L+ LD+S NK+S S + ++ L+
Sbjct: 141 ISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLES 198
Query: 126 LYLMDNQLSG--------SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFL 177
L +NQ+S +L + N + + DI G L L L L L
Sbjct: 199 LIATNNQISDITPLGILTNLDELSLNGNQLKDI--------GTLA-----SLTNLTDLDL 245
Query: 178 RENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQE 237
N P LS +L EL LG N +S P + LT L + L N+L P
Sbjct: 246 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-- 299
Query: 238 IGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS--GSLPSRIDLALPNLEF 295
I L+NL L L FNN++ + P + +++ L+ +F NN +S SL + L N+ +
Sbjct: 300 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDVSSLAN-----LTNINW 352
Query: 296 LNLGINSFSGTIP 308
L+ G N S P
Sbjct: 353 LSAGHNQISDLTP 365
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 166/382 (43%), Gaps = 68/382 (17%)
Query: 196 LQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255
L +++ N L+ P + NLT L I + NN++ P + L NL L L N +T
Sbjct: 65 LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT 120
Query: 256 GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLA----LPNLEFLNLGINSFSGTIPSSI 311
+ P + N++ L + L +N++S D++ L +L+ LN G N + P +
Sbjct: 121 DIDP--LKNLTNLNRLELSSNTIS-------DISALSGLTSLQQLNFG-NQVTDLKP--L 168
Query: 312 TNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLR 371
N + L L++ SN S S + L NL+ I NN S LG L++L
Sbjct: 169 ANLTTLERLDISSNKVSDI--SVLAKLTNLESL-IATNNQISDITPLGILTNL------D 219
Query: 372 YLGLGGNPLDGFLPSSIGNLS--LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNL 429
L L GN L IG L+ +L L++A IS P + L+ L L LG N +
Sbjct: 220 ELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 272
Query: 430 SGSIPVTFGGLQKLQGLDLAFNKLAGSIP--------------------DEICLLSRLNE 469
S P GL L L+L N+L P + L++L
Sbjct: 273 SNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 330
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L + NK+S S L NLT++ +L+ G N+ + + P NL I ++ D
Sbjct: 331 LFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN----DQAW 382
Query: 530 SLAIGNLKAVVGIDLSRNNLSG 551
+ A N KA V I + N++G
Sbjct: 383 TNAPVNYKANVSIPNTVKNVTG 404
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 157/360 (43%), Gaps = 51/360 (14%)
Query: 150 IRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGA 209
I S N+L+ P +L L + + N P L+ L L L N ++
Sbjct: 68 INFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 122
Query: 210 IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQ-LGF-NNLTGVVPATIFNMST 267
P + NLT L R+ L +N + +I L L LQ L F N +T + P + N++T
Sbjct: 123 DP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLNFGNQVTDLKP--LANLTT 173
Query: 268 LKEIFLYNNSLSG-SLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNS 326
L+ + + +N +S S+ ++ L NLE L N S P I + L L + N
Sbjct: 174 LERLDISSNKVSDISVLAK----LTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQ 227
Query: 327 FSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLP- 385
+ +L NL D+ N ++ L+ L+ KL L LG N + P
Sbjct: 228 LKDI--GTLASLTNLTDLDLANN-------QISNLAPLSGLTKLTELKLGANQISNISPL 278
Query: 386 ---SSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQK 442
+++ NL L+ +L +IS I NL NL L+L NN+S PV+ L K
Sbjct: 279 AGLTALTNLELNENQLE----DIS-----PISNLKNLTYLTLYFNNISDISPVS--SLTK 327
Query: 443 LQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
LQ L + NK++ + L+ +N L N+IS + L NLT + L L +T
Sbjct: 328 LQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWT 383
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKN 778
L + +NF + IG G +G VY+AR + G +A+K + + E ++K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H N+VK++ ++ LV E++S L+ + +S AL I + L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQG 118
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMA 896
L F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y A
Sbjct: 119 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRA 174
Query: 897 PDEIFVG 903
P EI +G
Sbjct: 175 P-EILLG 180
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 715 RFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLK-SFEAE 772
R+ E +R +F +++G G F V A + + +AIK + + S E E
Sbjct: 9 RWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ I+H N+V + + L+++ +S G L D + + + I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLI 122
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVL---LDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
L+ + + H I+H DLKP N+L LDED +SDFG++K+ ED ++ +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 890 ATIGYMAPD 898
T GY+AP+
Sbjct: 180 GTPGYVAPE 188
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 715 RFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLK-SFEAE 772
R+ E +R +F +++G G F V A + + +AIK + + S E E
Sbjct: 9 RWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ I+H N+V + + L+++ +S G L D + + + I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLI 122
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVL---LDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
L+ + + H I+H DLKP N+L LDED +SDFG++K+ ED ++ +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 890 ATIGYMAPD 898
T GY+AP+
Sbjct: 180 GTPGYVAPE 188
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 715 RFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLK-SFEAE 772
R+ E +R +F +++G G F V A + + +AIK + + S E E
Sbjct: 9 RWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ I+H N+V + + L+++ +S G L D + + + I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLI 122
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVL---LDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
L+ + + H I+H DLKP N+L LDED +SDFG++K+ ED ++ +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 890 ATIGYMAPD 898
T GY+AP+
Sbjct: 180 GTPGYVAPE 188
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 174
Query: 901 FVG 903
+G
Sbjct: 175 LLG 177
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G FG V+R + G E+A+K+F + +S+ E E+ + + RH N++ I++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF----GH 843
+ D+ LV +Y +GSL D L+ + +L + AS L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQ 163
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMR-TQTLATIGYMAPD 898
P I H DLK N+L+ ++ ++D G+A + S D + + T YMAP+
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT+ T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTELCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA--ECEV 775
YF+ L + + + +G G +G VY+A+ G +A+K A E +
Sbjct: 15 YFQGL--MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+K + H N+V +I ++ LV E+M L+ L + L I I +
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIYLYQL 128
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895
L + H I+H DLKP N+L++ D L+DFG+A+ S T + T+ Y
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYR 186
Query: 896 APD 898
APD
Sbjct: 187 APD 189
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA--ECEV 775
YF+ L + + + +G G +G VY+A+ G +A+K A E +
Sbjct: 15 YFQGL--MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+K + H N+V +I ++ LV E+M L+ L + L I I +
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIYLYQL 128
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895
L + H I+H DLKP N+L++ D L+DFG+A+ S T + T+ Y
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYR 186
Query: 896 APD 898
APD
Sbjct: 187 APD 189
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP- 173
Query: 899 EIFVG 903
EI +G
Sbjct: 174 EILLG 178
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G + L L+ F I L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK----LSKFDEQRTATYITELANAL 126
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 182
Query: 900 I 900
I
Sbjct: 183 I 183
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-----EDGV-EIAIKVFHPQC-ASTLKSFEAECEV 775
F NN+ +G G FG V A ED V ++A+K+ A ++ +E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 776 IKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
+ ++ +H N+V ++ +C++ ++ EY G L + L + L I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 835 ALEYLHFGH----------STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ LHF S IH D+ NVLL VA + DFG+A+ + + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 885 RTQTLATIGYMAPDEIF 901
+ + +MAP+ IF
Sbjct: 223 KGNARLPVKWMAPESIF 239
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 174
Query: 901 FVG 903
+G
Sbjct: 175 LLG 177
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 174
Query: 901 FVG 903
+G
Sbjct: 175 LLG 177
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 178
Query: 901 FVG 903
+G
Sbjct: 179 LLG 181
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 173
Query: 901 FVG 903
+G
Sbjct: 174 LLG 176
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 181
Query: 901 FVG 903
+G
Sbjct: 182 LLG 184
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 174
Query: 901 FVG 903
+G
Sbjct: 175 LLG 177
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 181
Query: 901 FVG 903
+G
Sbjct: 182 LLG 184
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 173
Query: 901 FVG 903
+G
Sbjct: 174 LLG 176
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 126
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEX 182
Query: 900 I 900
I
Sbjct: 183 I 183
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 715 RFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTLK-SFEAE 772
R+ E +R +F +++G G F V A + + +AIK + + S E E
Sbjct: 9 RWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ I+H N+V + + L+++ +S G L D + + + I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRLI 122
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVL---LDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
L+ + + H I+H DLKP N+L LDED +SDFG++K+ ED ++ +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 890 ATIGYMAPD 898
T GY+AP+
Sbjct: 180 GTPGYVAPE 188
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++S L+ + +S AL I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 173
Query: 899 EIFVG 903
EI +G
Sbjct: 174 EILLG 178
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 40/274 (14%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVY--RARLEDGVEIAIKVFHPQCASTLKSFEA---EC 773
F++LR +G G FG V+ R+R +G A+KV + LK E E
Sbjct: 8 FQILRT---------LGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDER 57
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
++ + H ++++ + + ++++Y+ G L L S N + ++
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVC 116
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
ALEYLH S II+ DLKP N+LLD++ ++DFG AK + + T
Sbjct: 117 LALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPD 168
Query: 894 YMAPDEIFVGEL--SLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALE 951
Y+AP+ + S+ W +L +L+G + + + + L
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIY--------EMLAGYTPFYDSNT---MKTYEKILN 217
Query: 952 CTMESPE-KRIDAKDTITRLLKIRDTLSKRIGNL 984
+ P D KD ++RL+ RD LS+R+GNL
Sbjct: 218 AELRFPPFFNEDVKDLLSRLIT-RD-LSQRLGNL 249
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKN 778
L + +NF + IG G +G VY+AR + G +A+K + + E ++K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H N+VK++ ++ LV E++ L+ + +S AL I + L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQG 118
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMA 896
L F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y A
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRA 174
Query: 897 PDEIFVG 903
P EI +G
Sbjct: 175 P-EILLG 180
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRARL----EDGVEIAIKVFHPQCASTLK----- 767
S+FELL+ ++G G FG V+ R + G A+KV +TLK
Sbjct: 28 SHFELLK---------VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK---KATLKVRDRV 75
Query: 768 SFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
+ E +++ ++ H +VK+ + + L+L+++ G L L +F +
Sbjct: 76 RTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEED 131
Query: 828 I---MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ + ++A L++LH S II+ DLKP N+LLDE+ L+DFG++K D
Sbjct: 132 VKFYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKK 186
Query: 885 RTQTLATIGYMAPDEI 900
T+ YMAP+ +
Sbjct: 187 AYSFCGTVEYMAPEVV 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKN 778
L + +NF + IG G +G VY+AR + G +A+K + + E ++K
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H N+VK++ ++ LV E++ L+ + +S AL I + L+
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQG 119
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMA 896
L F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y A
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRA 175
Query: 897 PDEIFVG 903
P EI +G
Sbjct: 176 P-EILLG 181
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 126
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEM 182
Query: 900 I 900
I
Sbjct: 183 I 183
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 122
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEM 178
Query: 900 I 900
I
Sbjct: 179 I 179
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAI 755
RG+ ++ + P + R F++ N + IG G +G V A + V +AI
Sbjct: 17 RGSHMAAAAAAGAGPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAI 73
Query: 756 KVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN---- 806
K P C TL+ E +++ RH N++ I ND +A +E M +
Sbjct: 74 KKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIV 124
Query: 807 -----GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE 861
L L + + + + C + I L+Y+H S ++H DLKPSN+LL+
Sbjct: 125 QDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIH---SANVLHRDLKPSNLLLNT 179
Query: 862 DMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAPD 898
+ DFG+A++ + D + T+ +AT Y AP+
Sbjct: 180 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTXLCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 125
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 181
Query: 900 I 900
I
Sbjct: 182 I 182
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 138
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 194
Query: 900 I 900
I
Sbjct: 195 I 195
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 900 I 900
I
Sbjct: 181 I 181
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 120
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 176
Query: 900 I 900
I
Sbjct: 177 I 177
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 126
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 182
Query: 900 I 900
I
Sbjct: 183 I 183
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 900 I 900
I
Sbjct: 181 I 181
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 147
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 203
Query: 900 I 900
I
Sbjct: 204 I 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 728 FAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFH---PQCASTLKSFEAECEVIKNIRHRN 783
F++ IG G FG+VY AR + + +AIK Q + E ++ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS----ALEYL 839
++ + LV+EY CL S++ L + + ++IA+ AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+K N+LL E + L DFG A +++ + + T +MAP+
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 221
Query: 900 IFV 902
I
Sbjct: 222 ILA 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 750 GVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKIISSCSNDDFKAL--VLEYMSN 806
G +A+K +S ++ E ++++ + H +++K C + +L V+EY+
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 807 GSLEDCL--HSSNCA-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863
GSL D L HS A L +F + I + YLH H IH DL NVLLD D
Sbjct: 120 GSLRDYLPRHSIGLAQLLLFAQ-----QICEGMAYLHAQH---YIHRDLAARNVLLDNDR 171
Query: 864 VAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPD 898
+ + DFG+AK + G + +R + + + AP+
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCA-STLKSFEAECEVIKN 778
A ++ N I+G G FG VY + + +A+K C + F +E ++KN
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H ++VK+I + +++E G L L + +L + + + I A+ Y
Sbjct: 82 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L S +H D+ N+L+ L DFG+++ + ED L I +M+P+
Sbjct: 141 LE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPE 196
Query: 899 EI 900
I
Sbjct: 197 SI 198
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCA-STLKSFEAECEVIKN 778
A ++ N I+G G FG VY + + +A+K C + F +E ++KN
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H ++VK+I + +++E G L L + +L + + + I A+ Y
Sbjct: 66 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L S +H D+ N+L+ L DFG+++ + ED L I +M+P+
Sbjct: 125 LE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPE 180
Query: 899 EI 900
I
Sbjct: 181 SI 182
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCA-STLKSFEAECEVIKN 778
A ++ N I+G G FG VY + + +A+K C + F +E ++KN
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ H ++VK+I + +++E G L L + +L + + + I A+ Y
Sbjct: 70 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L S +H D+ N+L+ L DFG+++ + ED L I +M+P+
Sbjct: 129 LE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPE 184
Query: 899 EI 900
I
Sbjct: 185 SI 186
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 139
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 140 IH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 898 D 898
+
Sbjct: 197 E 197
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 122
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SCHAPSSRRTTLSGTLDYLPPEM 178
Query: 900 I 900
I
Sbjct: 179 I 179
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR ++ I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA--ECE 774
YF+ + + + IG G FG + EDG + IK + S+ + E+ E
Sbjct: 19 YFQ---SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA 75
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR-LNIMIDIA 833
V+ N++H N+V+ S + +V++Y G L +++ L + L+ + I
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
AL+++H I+H D+K N+ L +D L DFG+A++L+ E + + T
Sbjct: 136 LALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPY 190
Query: 894 YMAPD 898
Y++P+
Sbjct: 191 YLSPE 195
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 733 IIGIGGFGSVYRARL--EDG--VEIAIKVFHPQCAST--LKSFEAECEVIKNIRHRNLVK 786
I+G G FGSV L EDG +++A+K +S ++ F +E +K+ H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 787 IISSCSNDDFKAL-----VLEYMSNGSLEDCLHSSNCA-----LNIFCRLNIMIDIASAL 836
++ C + + +L +M G L L S + + L M+DIA +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880
EYL + +H DL N +L +DM ++DFG++K + D
Sbjct: 161 EYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 734 IGIGGFGSVYRARLE-----DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI- 787
+G G FGSV R + G +A+K + F+ E +++K + +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 788 -ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
+S LV+EY+ +G L D L L+ L I +EYL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 131
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
+H DL N+L++ + ++DFG+AKLL +D +R + I + AP+ +
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 173
Query: 901 FVG 903
+G
Sbjct: 174 LLG 176
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 734 IGIGGFGSVYRARLE-----DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI- 787
+G G FGSV R + G +A+K + F+ E +++K + +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 788 -ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
+S LV+EY+ +G L D L L+ L I +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 134
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
+H DL N+L++ + ++DFG+AKLL +D +R + I + AP+ +
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 734 IGIGGFGSVYRARLE-----DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI- 787
+G G FGSV R + G +A+K + F+ E +++K + +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 788 -ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
+S LV+EY+ +G L D L L+ L I +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 135
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
+H DL N+L++ + ++DFG+AKLL +D +R + I + AP+ +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 734 IGIGGFGSVYRARLE-----DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI- 787
+G G FGSV R + G +A+K + F+ E +++K + +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 788 -ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
+S LV+EY+ +G L D L L+ L I +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 147
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
+H DL N+L++ + ++DFG+AKLL +D +R + I + AP+ +
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 398 LNIAFCNISGNIPKAI-----GNLSNLIVLSLGGNNLSGSIPV-TFGGLQKLQGLDLAFN 451
+N + N+ N + I +L +L +L L NL I V F GL L L+L N
Sbjct: 35 VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS-KNLVRKIEVGAFNGLPSLNTLELFDN 93
Query: 452 KLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS-NRFTFVIPSTFW 510
+L LS+L EL L N I S + SL+ L+LG R ++ + F
Sbjct: 94 RLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFE 153
Query: 511 NLKDILSFDIS-SNLLDGPISLAIGNLKAVVGID---LSRNNLSGNIPTTLEGLKSLQNI 566
L ++ ++ NL D P NL A+V ++ LS N L P + +GL SL+ +
Sbjct: 154 GLVNLRYLNLGMCNLKDIP------NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKL 207
Query: 567 SLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS-FEKLSYLKELNLSFN 619
L + ++ +F ++ SLE L+LS+N + S+P F L L+ ++L+ N
Sbjct: 208 WLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDLFTPLHRLERVHLNHN 260
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 241 LQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGI 300
L +L+ L+L N LT V +S L+E++L NN + S+PS +P+L L+LG
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLG- 139
Query: 301 NSFSGTIPSSITNASKLILLEMGSN-SFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELG 359
+L LE S +F G + NL+ ++ NL P L
Sbjct: 140 ---------------ELKRLEYISEAAFEGLV--------NLRYLNLGMCNL-KDIPNLT 175
Query: 360 FLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNL 419
L +L L L GN LD P S L+ SL +L + ++ A +L +L
Sbjct: 176 ALV------RLEELELSGNRLDLIRPGSFQGLT-SLRKLWLMHAQVATIERNAFDDLKSL 228
Query: 420 IVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFN 451
L+L NNL F L +L+ + L N
Sbjct: 229 EELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 78 LNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSL 137
LNL NL+ P + L L+ L+LS N+L P S +++L+ L+LM Q++
Sbjct: 161 LNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 218
Query: 138 SSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFY 183
+ + S+ ++ LS N L LP ++ L L+ + L N ++
Sbjct: 219 RNAFDDLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHNPWH 263
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 542 IDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSI 601
++L N++ T + L+ L+ + L+ N + +F + SL +L+L +N+++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 602 PVSFEKLSYLKELNLSFNKLKGEIP 626
+FE LS L+EL L N ++ IP
Sbjct: 100 TQAFEYLSKLRELWLRNNPIES-IP 123
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 119
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 174
Query: 899 EIFVG 903
EI +G
Sbjct: 175 EILLG 179
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 119
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 174
Query: 899 EIFVG 903
EI +G
Sbjct: 175 EILLG 179
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 172
Query: 899 EIFVG 903
EI +G
Sbjct: 173 EILLG 177
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 120
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 175
Query: 899 EIFVG 903
EI +G
Sbjct: 176 EILLG 180
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 172
Query: 899 EIFVG 903
EI +G
Sbjct: 173 EILLG 177
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 172
Query: 899 EIFVG 903
EI +G
Sbjct: 173 EILLG 177
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 173
Query: 899 EIFVG 903
EI +G
Sbjct: 174 EILLG 178
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 172
Query: 899 EIFVG 903
EI +G
Sbjct: 173 EILLG 177
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 119
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 174
Query: 899 EIFVG 903
EI +G
Sbjct: 175 EILLG 179
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 173
Query: 899 EIFVG 903
EI +G
Sbjct: 174 EILLG 178
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHR 782
+F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-IDIASALEYLHF 841
L + + D V+EY + G L H S + R +I SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH- 122
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+T T Y+AP+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLAPE 175
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 139
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 140 IH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 898 D 898
+
Sbjct: 197 E 197
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 733 IIGIGGFGSVYRARLE----DGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKI 787
+IG G FG V L+ + +AIK + F +E ++ H N++ +
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
+ ++ E+M NGSL+ L ++ + + ++ IA+ ++YL
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNY 130
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA-----TIGYMAPDEI 900
+H L N+L++ ++V +SDFG+++ L ED+++ T T A I + AP+ I
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAI 186
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHR 782
+F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-IDIASALEYLHF 841
L + + D V+EY + G L H S + R +I SALEYLH
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH- 125
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+T T Y+AP+
Sbjct: 126 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLAPE 178
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDAS--ALTGIPLPLIKSYLFQLLQGLA 120
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 175
Query: 899 EIFVG 903
EI +G
Sbjct: 176 EILLG 180
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR--LEDGVEIAIKV-FHPQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR L V K+ + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 174
Query: 901 FVG 903
+G
Sbjct: 175 LLG 177
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRAR--LEDGVEIAIKV-FHPQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR L V K+ + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT--LATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT T + T+ Y AP EI
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYTHEVVTLWYRAP-EI 173
Query: 901 FVG 903
+G
Sbjct: 174 LLG 176
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 733 IIGIGGFGSVYRA-RLEDG----VEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
++G G FG+VY+ + +G + +AIK+ + F E ++ ++ H +LV+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
++ C + + LV + M +G L + +H + LN + IA + YL
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERR 160
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881
++H DL NVL+ ++DFG+A+LL G+++
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 733 IIGIGGFGSVYRA-RLEDG----VEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
++G G FG+VY+ + +G + +AIK+ + F E ++ ++ H +LV+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
++ C + + LV + M +G L + +H + LN + IA + YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERR 137
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881
++H DL NVL+ ++DFG+A+LL G+++
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP EI
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP-EI 173
Query: 901 FVG 903
+G
Sbjct: 174 LLG 176
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP EI
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP-EI 173
Query: 901 FVG 903
+G
Sbjct: 174 LLG 176
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHR 782
+NF + IG G +G VY+AR + G +A+K + + E ++K + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N+VK++ ++ LV E++ L+ + +S AL I + L+ L F
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPDEI 900
HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP EI
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP-EI 175
Query: 901 FVG 903
+G
Sbjct: 176 LLG 178
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 143
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 144 IH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 898 D 898
+
Sbjct: 201 E 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 43/206 (20%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
+F E +IG GGFG V++A+ DG I+ + + E E + + + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIR----RVKYNNEKAEREVKALAKLDHVNIV 68
Query: 786 KIISSC----------SNDDFKA--------------------LVLEYMSNGSLEDCLHS 815
+ C S+D ++ + +E+ G+LE +
Sbjct: 69 HY-NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 816 SNC-ALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874
L+ L + I ++Y+H S +IH DLKPSN+ L + + DFG+
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 875 LLSGEDESTMRTQTLATIGYMAPDEI 900
L + + RT++ T+ YM+P++I
Sbjct: 185 SLKNDGK---RTRSKGTLRYMSPEQI 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKV-FHPQC--ASTLKSFEAECEVIKNIRH 781
++F +G G FG+VY AR + +A+KV F Q A E E+ ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
N++++ + L+LEY G++ L L+ F I L +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELANALSY 127
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS +IH D+KP N+LL + ++DFG S S+ RT T+ Y+ P+ I
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 139
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 140 IH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 898 D 898
+
Sbjct: 197 E 197
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 118
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ RT T+ Y+ P+
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEM 174
Query: 900 I 900
I
Sbjct: 175 I 175
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFH-PQCASTLKSFEAECEVIKNIRHRN 783
D++ +IG G V A E +AIK + +C +++ E + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL--------HSSNCALNIFCRLNIMIDIASA 835
+V +S D LV++ +S GS+ D + H S L+ I+ ++
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVLEG 128
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGED--ESTMRTQTLATI 892
LEYLH IH D+K N+LL ED ++DFG++ L +G D + +R + T
Sbjct: 129 LEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 893 GYMAPD 898
+MAP+
Sbjct: 186 CWMAPE 191
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFH-PQCASTLKSFEAECEVIKNIRHRN 783
D++ +IG G V A E +AIK + +C +++ E + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL--------HSSNCALNIFCRLNIMIDIASA 835
+V +S D LV++ +S GS+ D + H S L+ I+ ++
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVLEG 133
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGED--ESTMRTQTLATI 892
LEYLH IH D+K N+LL ED ++DFG++ L +G D + +R + T
Sbjct: 134 LEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 893 GYMAPD 898
+MAP+
Sbjct: 191 CWMAPE 196
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 415 NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPD-EICLLSRLNELDLN 473
+L +L +L L N++ F GL L L+L N+L +IP+ LS+L EL L
Sbjct: 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLR 144
Query: 474 GNKISGSISSCLGNLTSLQYLNLGS-NRFTFVIPSTFWNLKDILSFDIS-SNLLDGPISL 531
N I S + SL+ L+LG R +++ F L ++ +++ NL + P
Sbjct: 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--- 201
Query: 532 AIGNLKAVVG---IDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLE 588
NL ++ +DLS N+LS P + +GL LQ + + ++++ +F N+ SL
Sbjct: 202 ---NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258
Query: 589 SLDLSNNKISGSIPVSFEKLSYLKELNLSFN 619
++L++N ++ F L +L+ ++L N
Sbjct: 259 EINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 67 ICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFT-MSTLKV 125
I ++ + + T+ + +FN L++L +L+L N+L++ IP+ F +S LK
Sbjct: 92 ILQLSRNHIRTIEIGAFN----------GLANLNTLELFDNRLTT-IPNGAFVYLSKLKE 140
Query: 126 LYLMDNQLSGSLSSFTFNT-SSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYG 184
L+L +N + S+ S+ FN S+ + L + K + E L L++L L
Sbjct: 141 LWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198
Query: 185 KIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNL 244
+IP+ L+ +L EL L N+LS P L LQ++ +I +++ LQ+L
Sbjct: 199 EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257
Query: 245 DVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNN 276
+ L NNLT ++P +F + L+ I L++N
Sbjct: 258 VEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 237 EIGY---LQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNL 293
EIG L NL+ L+L N LT + +S LKE++L NN + S+PS +P+L
Sbjct: 104 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSL 162
Query: 294 EFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTS 353
L+LG +L + G +F G + NLR L L + +
Sbjct: 163 RRLDLG-------------ELKRLSYISEG--AFEG-----LSNLRYLNLAMCNLREIPN 202
Query: 354 STPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAI 413
TP + KL L L GN L P S L + L++L + I A
Sbjct: 203 LTPLI----------KLDELDLSGNHLSAIRPGSFQGL-MHLQKLWMIQSQIQVIERNAF 251
Query: 414 GNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFN 451
NL +L+ ++L NNL+ F L L+ + L N
Sbjct: 252 DNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 78 LNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSL 137
LNL+ NL+ P + L L LDLS N LS+ P S + L+ L+++ +Q+
Sbjct: 190 LNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIE 247
Query: 138 SSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMF 182
+ N S+++I L+ N L+ LP ++ L +L+ + L N +
Sbjct: 248 RNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHNPW 291
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 28/136 (20%)
Query: 535 NLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSN 594
+L+ + + LSRN++ GL +L + L NRL +F ++ L+ L L N
Sbjct: 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 145
Query: 595 NKISGSIPV--------------------------SFEKLSYLKELNLSFNKLKGEIPRG 628
N I SIP +FE LS L+ LNL+ L+ EIP
Sbjct: 146 NPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNL 203
Query: 629 GPFANFTAESFMGNEL 644
P GN L
Sbjct: 204 TPLIKLDELDLSGNHL 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
+G G +G V+R + G +A+K+F + KS+ E E+ + RH N++ I+S
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH---FG-H 843
+ L+ Y GSL D L + L+ L I++ IAS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-----LATIGYMAP 897
P I H DLK N+L+ ++ ++D G+A + S +ST + + T YMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS---QSTNQLDVGNNPRVGTKRYMAP 215
Query: 898 D 898
+
Sbjct: 216 E 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G + L L+ F I L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK----LSKFDEQRTATYITELANAL 126
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLXGTLDYLPPEM 182
Query: 900 I 900
I
Sbjct: 183 I 183
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 723 RATDNFAENNIIGIGGFGSVYRA--RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI- 779
R T F E IG G FGSV++ RL DG AIK A ++ A EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 780 --RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL---NIMIDIAS 834
+H ++V+ S+ + DD + EY + GSL D + + ++ F ++++ +
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLL 859
L Y+H S ++H D+KPSN+ +
Sbjct: 127 GLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 723 RATDNFAENNIIGIGGFGSVYRA--RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI- 779
R T F E IG G FGSV++ RL DG AIK A ++ A EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 780 --RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL---NIMIDIAS 834
+H ++V+ S+ + DD + EY + GSL D + + ++ F ++++ +
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLL 859
L Y+H S ++H D+KPSN+ +
Sbjct: 123 GLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 723 RATDNFAENNIIGIGGFGSVYRA--RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI- 779
R T F E IG G FGSV++ RL DG AIK A ++ A EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 780 --RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL---NIMIDIAS 834
+H ++V+ S+ + DD + EY + GSL D + + ++ F ++++ +
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLL 859
L Y+H S ++H D+KPSN+ +
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 723 RATDNFAENNIIGIGGFGSVYRA--RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI- 779
R T F E IG G FGSV++ RL DG AIK A ++ A EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 780 --RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL---NIMIDIAS 834
+H ++V+ S+ + DD + EY + GSL D + + ++ F ++++ +
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLL 859
L Y+H S ++H D+KPSN+ +
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
+F E +IG GGFG V++A+ DG IK + + E E + + + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIK----RVKYNNEKAEREVKALAKLDHVNIV 67
Query: 786 KIISSCSNDDFKA----------------LVLEYMSNGSLEDCLHSSNC-ALNIFCRLNI 828
D+ + +E+ G+LE + L+ L +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
I ++Y+H S +I+ DLKPSN+ L + + DFG+ L + + R ++
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRS 181
Query: 889 LATIGYMAPDEI 900
T+ YM+P++I
Sbjct: 182 KGTLRYMSPEQI 193
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 92 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 144
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 145 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 898 D 898
+
Sbjct: 202 E 202
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 92
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 93 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 145
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 146 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 898 D 898
+
Sbjct: 203 E 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 83
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 84 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 136
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 137 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 898 D 898
+
Sbjct: 194 E 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 143
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 144 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 898 D 898
+
Sbjct: 201 E 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIR 780
+ +NF + IG G +G VY+AR + G +A+K + + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+VK++ ++ LV E++ L+ + +S AL I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 120
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT--QTLATIGYMAPD 898
F HS ++H DLKP N+L++ + L+DFG+A+ +RT + T+ Y AP
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAP- 175
Query: 899 EIFVG 903
EI +G
Sbjct: 176 EILLG 180
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 139
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 140 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 898 D 898
+
Sbjct: 197 E 197
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 88
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 89 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 141
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 142 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 898 D 898
+
Sbjct: 199 E 199
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 85 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 137
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 138 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 898 D 898
+
Sbjct: 195 E 195
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 85 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 137
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 138 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 898 D 898
+
Sbjct: 195 E 195
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-----EDGV-EIAIKVFHPQC-ASTLKSFEAECEV 775
F NN+ +G G FG V A ED V ++A+K+ A ++ +E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 776 IKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
+ ++ +H N+V ++ +C++ ++ EY G L + L + L I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 835 ALEYLHFGH----------STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ LHF S IH D+ NVLL VA + DFG+A+ + + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 885 RTQTLATIGYMAPDEIF 901
+ + +MAP+ IF
Sbjct: 223 KGNARLPVKWMAPESIF 239
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 398 LNIAFCNISGNIPKAI-----GNLSNLIVLSLGGNNLSGSIPV-TFGGLQKLQGLDLAFN 451
+N + N+ N + I +L +L +L L NL I V F GL L L+L N
Sbjct: 35 VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS-KNLVRKIEVGAFNGLPSLNTLELFDN 93
Query: 452 KLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGS-NRFTFVIPSTFW 510
+L LS+L EL L N I S + SL+ L+LG R ++ + F
Sbjct: 94 RLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFE 153
Query: 511 NLKDILSFDIS-SNLLDGPISLAIGNLKAVVGID---LSRNNLSGNIPTTLEGLKSLQNI 566
L ++ ++ NL D P NL A+V ++ LS N L P + +GL SL+ +
Sbjct: 154 GLVNLRYLNLGMCNLKDIP------NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKL 207
Query: 567 SLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVS-FEKLSYLKELNLSFN 619
L + ++ +F ++ SLE L+LS+N + S+P F L L+ ++L+ N
Sbjct: 208 WLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDLFTPLHRLERVHLNHN 260
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 241 LQNLDVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLG 299
L +L+ L+L F+N VP F +S L+E++L NN + S+PS +P+L L+LG
Sbjct: 82 LPSLNTLEL-FDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLG 139
Query: 300 INSFSGTIPSSITNASKLILLEMGSN-SFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPEL 358
+L LE S +F G + NL+ ++ NL P L
Sbjct: 140 ----------------ELKRLEYISEAAFEGLV--------NLRYLNLGMCNL-KDIPNL 174
Query: 359 GFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSN 418
L +L L L GN LD P S L+ SL +L + ++ A +L +
Sbjct: 175 TALV------RLEELELSGNRLDLIRPGSFQGLT-SLRKLWLMHAQVATIERNAFDDLKS 227
Query: 419 LIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFN 451
L L+L NNL F L +L+ + L N
Sbjct: 228 LEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 36.2 bits (82), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 78 LNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSL 137
LNL NL+ P + L L+ L+LS N+L P S +++L+ L+LM Q++
Sbjct: 161 LNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 218
Query: 138 SSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFY 183
+ + S+ ++ LS N L LP ++ L L+ + L N ++
Sbjct: 219 RNAFDDLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHNPWH 263
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 542 IDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSI 601
++L N++ T + L+ L+ + L+ N + +F + SL +L+L +N+++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 602 PVSFEKLSYLKELNLSFNKLKGEIP 626
+FE LS L+EL L N ++ IP
Sbjct: 100 TQAFEYLSKLRELWLRNNPIES-IP 123
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 34/190 (17%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVE---IAIKVFHP-----QCASTLKSFEAECEVIKN 778
+ + IG G +G V A D V +AIK P C TL+ E +++
Sbjct: 44 RYTQLQYIGEGAYGMVSSAY--DHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLR 97
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIM 829
RH N++ I D +A LE M + L L S + + C +
Sbjct: 98 FRHENVIGI-----RDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF--L 150
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQT 888
I L+Y+H S ++H DLKPSN+L++ + DFG+A++ E D + T+
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 889 LATIGYMAPD 898
+AT Y AP+
Sbjct: 208 VATRWYRAPE 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 94
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 95 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 147
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 148 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 898 D 898
+
Sbjct: 205 E 205
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 139
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 140 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 898 D 898
+
Sbjct: 197 E 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIK-VFHPQCASTLKSFEAECEVIKNI 779
+ ++ F + +G G + +VY+ GV +A+K V T + E ++K +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA-------LNIFCRLNIMIDI 832
+H N+V++ ++ LV E+M N L+ + S LN+ +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL-- 117
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
L+ L F H I+H DLKP N+L+++ L DFG+A+ G +T ++ + T+
Sbjct: 118 ---LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSE-VVTL 172
Query: 893 GYMAPD 898
Y APD
Sbjct: 173 WYRAPD 178
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 33/196 (16%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI----AIKVFHPQCASTLK----- 767
S FELL+ ++G G FG V+ + G + A+KV +TLK
Sbjct: 25 SQFELLK---------VLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRV 72
Query: 768 SFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
+ E +++ + H +VK+ + + L+L+++ G L L +F +
Sbjct: 73 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEED 128
Query: 828 I---MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ + ++A AL++LH S II+ DLKP N+LLDE+ L+DFG++K D
Sbjct: 129 VKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKK 183
Query: 885 RTQTLATIGYMAPDEI 900
T+ YMAP+ +
Sbjct: 184 AYSFCGTVEYMAPEVV 199
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 33/196 (16%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI----AIKVFHPQCASTLK----- 767
S FELL+ ++G G FG V+ + G + A+KV +TLK
Sbjct: 24 SQFELLK---------VLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRV 71
Query: 768 SFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
+ E +++ + H +VK+ + + L+L+++ G L L +F +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEED 127
Query: 828 I---MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ + ++A AL++LH S II+ DLKP N+LLDE+ L+DFG++K D
Sbjct: 128 VKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKK 182
Query: 885 RTQTLATIGYMAPDEI 900
T+ YMAP+ +
Sbjct: 183 AYSFCGTVEYMAPEVV 198
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 33/196 (16%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI----AIKVFHPQCASTLK----- 767
S FELL+ ++G G FG V+ + G + A+KV +TLK
Sbjct: 24 SQFELLK---------VLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRV 71
Query: 768 SFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
+ E +++ + H +VK+ + + L+L+++ G L L +F +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEED 127
Query: 828 I---MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+ + ++A AL++LH S II+ DLKP N+LLDE+ L+DFG++K D
Sbjct: 128 VKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKK 182
Query: 885 RTQTLATIGYMAPDEI 900
T+ YMAP+ +
Sbjct: 183 AYSFCGTVEYMAPEVV 198
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 734 IGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKIIS 789
+G G +GSV Y ARL V + K+ P Q + E ++K+++H N++ ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK-KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 790 ----SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
+ S +DF + L G+ D + C ++ + L L + HS
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGA--DLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSNV ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPE 198
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK--SFEAECEVIKNIRHRNL 784
F +G G F V A + G A+K P+ A K S E E V++ I+H N+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI-PKKALKGKESSIENEIAVLRKIKHENI 82
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
V + + + LV++ +S G L D + + + I L+ +++ H
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRI----VEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 845 TPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I+H DLKP N+L DE+ +SDFG++K+ E + + + T GY+AP+
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPE 192
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 123
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL +++FG S S+ RT T+ Y+ P+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTLCGTLDYLPPEM 179
Query: 900 I 900
I
Sbjct: 180 I 180
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL +++FG S S+ RT T+ Y+ P+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 900 I 900
I
Sbjct: 181 I 181
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 89 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 141
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 142 IH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 898 D 898
+
Sbjct: 199 E 199
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 89 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 141
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 142 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 898 D 898
+
Sbjct: 199 E 199
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEM 180
Query: 900 I 900
I
Sbjct: 181 I 181
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKIIS 789
+G G +GSV Y ARL V + K+ P Q + E ++K+++H N++ ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK-KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 790 ----SCSNDDFKALVL-EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ S +DF + L + L + + S + ++ + L L + HS
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDE-----HVQFLVYQLLRGLKYIHS 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSNV ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPE 198
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 734 IGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKIIS 789
+G G +GSV Y ARL V + K+ P Q + E ++K+++H N++ ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK-KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 790 ----SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
+ S +DF + L G+ D + C ++ + L L + HS
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGA--DLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSNV ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWYRAPE 190
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 123
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLDYLPPEM 179
Query: 900 I 900
I
Sbjct: 180 I 180
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AI+ P C TL+ E +++ RH N++ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 143
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP
Sbjct: 144 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 898 D 898
+
Sbjct: 201 E 201
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLDYLPPEM 180
Query: 900 I 900
I
Sbjct: 181 I 181
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLDYLPPEM 177
Query: 900 I 900
I
Sbjct: 178 I 178
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 728 FAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFH---PQCASTLKSFEAECEVIKNIRHRN 783
F++ IG G FG+VY AR + + +AIK Q + E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS----ALEYL 839
++ + LV+EY CL S++ L + + ++IA+ AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+K N+LL E + L DFG A +++ + + T +MAP+
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 182
Query: 900 IF 901
I
Sbjct: 183 IL 184
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 147
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDDLCGTLDYLPPEM 203
Query: 900 I 900
I
Sbjct: 204 I 204
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDDLCGTLDYLPPEM 180
Query: 900 I 900
I
Sbjct: 181 I 181
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV-FHPQC--ASTLKSFEAECEVIKNI 779
A ++F +G G FG+VY AR + I A+KV F Q A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
RH N++++ + L+LEY G++ L L+ F I L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 122
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
+ HS +IH D+KP N+LL ++DFG S S+ R T+ Y+ P+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDTLCGTLDYLPPEM 178
Query: 900 I 900
I
Sbjct: 179 I 179
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 96/253 (37%), Gaps = 35/253 (13%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + + A + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLE---S 133
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 904 ELSL--KRWVNDLLPVSLVEVVDKSL--------------LSGEEKHFAAKEQCLLSIFS 947
S W + V+L E+ + E + E C I++
Sbjct: 194 TFSHASDTW---MFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 250
Query: 948 LALECTMESPEKR 960
+ ++C PE R
Sbjct: 251 VMVQCWAHKPEDR 263
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 533 IGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDL 592
G L +V ++L RN L+G P EG +Q + L N+++ + F + L++L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 593 SNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAESFMGNELLCGLP--- 649
+N+IS +P SFE L+ L LNL+ N +S G CG P
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKV 169
Query: 650 -NLQVPPCKHSQ 660
++Q+ HS+
Sbjct: 170 RDVQIKDLPHSE 181
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 437 FGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNL 496
FG L L L+L N+L G P+ S + EL L NKI + L L+ LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 497 GSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLA 532
N+ + V+P +F +L + S +++SN + LA
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 413 IGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICL-LSRLNELD 471
G L +L+ L L N L+G P F G +Q L L NK+ I +++ L L +L L+
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLN 108
Query: 472 LNGNKISGSISSCLGNLTSLQYLNLGSNRF 501
L N+IS + +L SL LNL SN F
Sbjct: 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 214 IGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFL 273
G L L ++ L N+L G P ++ LQLG N + + + LK + L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 274 YNNSLSGSLPSRIDLALPNLEFLNLGINSFS 304
Y+N +S +P + L +L LNL N F+
Sbjct: 110 YDNQISCVMPGSFE-HLNSLTSLNLASNPFN 139
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 270 EIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSG 329
E+ L +N L + LP+L L L N +G P++ AS + L++G N
Sbjct: 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 92
Query: 330 FIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLD 381
L LK +++ N ++ P S + L L L NP +
Sbjct: 93 ISNKMFLGLHQLKTLNLYDNQISCVMP-----GSFEHLNSLTSLNLASNPFN 139
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
+G G +G V+R + G +A+K+F + KS+ E E+ + RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH---FG-H 843
+ L+ Y GSL D L + L+ L I++ IAS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-----LATIGYMAP 897
P I H DLK N+L+ ++ ++D G+A + S +ST + + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS---QSTNQLDVGNNPRVGTKRYMAP 186
Query: 898 D 898
+
Sbjct: 187 E 187
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
+G G +G V+R + G +A+K+F + KS+ E E+ + RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH---FG-H 843
+ L+ Y GSL D L + L+ L I++ IAS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-----LATIGYMAP 897
P I H DLK N+L+ ++ ++D G+A + S +ST + + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS---QSTNQLDVGNNPRVGTKRYMAP 186
Query: 898 D 898
+
Sbjct: 187 E 187
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHR 782
+F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-IDIASALEYLHF 841
L + + D V+EY + G L H S + R +I SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH- 122
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+ T Y+AP+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLAPE 175
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHR 782
+F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-IDIASALEYLHF 841
L + + D V+EY + G L H S + R +I SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH- 122
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+ T Y+AP+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLAPE 175
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G FG V+R + G E+A+K+F + +S+ E E+ + + RH N++ I++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF----GH 843
+ D+ LV +Y +GSL D L+ + +L + AS L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQ 125
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMR-TQTLATIGYMAPD 898
P I H DLK N+L+ ++ ++D G+A + S D + + T YMAP+
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G FG V+R + G E+A+K+F + +S+ E E+ + + RH N++ I++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF----GH 843
+ D+ LV +Y +GSL D L+ + +L + AS L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQ 124
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMR-TQTLATIGYMAPD 898
P I H DLK N+L+ ++ ++D G+A + S D + + T YMAP+
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G FG V+R + G E+A+K+F + +S+ E E+ + + RH N++ I++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF----GH 843
+ D+ LV +Y +GSL D L+ + +L + AS L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQ 150
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMR-TQTLATIGYMAPD 898
P I H DLK N+L+ ++ ++D G+A + S D + + T YMAP+
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G FG V+R + G E+A+K+F + +S+ E E+ + + RH N++ I++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF----GH 843
+ D+ LV +Y +GSL D L+ + +L + AS L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQ 130
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMR-TQTLATIGYMAPD 898
P I H DLK N+L+ ++ ++D G+A + S D + + T YMAP+
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G FG V+R + G E+A+K+F + +S+ E E+ + + RH N++ I++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 792 SNDDFKA----LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF----GH 843
+ D+ LV +Y +GSL D L+ + +L + AS L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--ALSTASGLAHLHMEIVGTQ 127
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMR-TQTLATIGYMAPD 898
P I H DLK N+L+ ++ ++D G+A + S D + + T YMAP+
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDG-VEIAIKV-FHPQCAS--TLKSFEAECEVIKNIRH 781
D+F +G G FG+VY AR + +A+KV F Q E E+ ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
N++++ + + L+LEY G L L S C + IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYCH- 140
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+IH D+KP N+LL ++DFG S S R T+ Y+ P+ I
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFGW----SVHAPSLRRKTMCGTLDYLPPEMI 193
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHR 782
+F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-IDIASALEYLHF 841
L + + D V+EY + G L H S + R +I SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH- 122
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+ T Y+AP+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLAPE 175
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 731 NNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRHRNLVK 786
++I+G G +V+R R + G AIKVF+ S L+ + E EV+K + H+N+VK
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFN--NISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 787 I--ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR--LNIMIDIASALEYLHFG 842
+ I + K L++E+ GSL L + A + L ++ D+ + +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL--- 128
Query: 843 HSTPIIHCDLKPSNVLL----DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I+H ++KP N++ D V L+DFG A+ L ED+ T Y+ PD
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQF-VSLYGTEEYLHPD 185
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 734 IGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G F V R ++ G E A K+ + + A + E E + + ++H N+V++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 791 CSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849
S + L+ + ++ G L ED + A + + I LE + H ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV-----AREYYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 850 CDLKPSNVLLDEDM---VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
DLKP N+LL + L+DFG+A + GE ++ T GY++P+
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPE 194
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIK-NIRHRNLV 785
+F +++G G G++ + D ++A+K P+C S + E ++++ + H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESDEHPNVI 81
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
+ + + F+ + +E + +L++ + + A + ++ S L +LH S
Sbjct: 82 RYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SL 137
Query: 846 PIIHCDLKPSNVLL-----DEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPD 898
I+H DLKP N+L+ + A +SDFG+ K L+ G + R+ T G++AP+
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHR 782
+F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-IDIASALEYLHF 841
L + + D V+EY + G L H S + R +I SALEYLH
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH- 127
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+ T Y+AP+
Sbjct: 128 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX-FCGTPEYLAPE 180
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKV-FHPQC--ASTLKSFEAECEVIKNIRH 781
++F +G G FG+VY AR + +A+KV F Q A E E+ ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
N++++ + L+LEY G++ L L+ F I L +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELANALSY 127
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS +IH D+KP N+LL + ++DFG S S+ R T+ Y+ P+ I
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGW----SVHAPSSRRDTLCGTLDYLPPEMI 182
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 715 RFSYFELLRAT----DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSF 769
RF ++ L A D F + ++G GGFG V+ +++ G A K + + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 EA---ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLH---SSNCALNIF 823
+ E +++ + R +V + + LV+ M+ G + ++ N
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 824 CRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDES 882
+ I S LE+LH II+ DLKP NVLLD+D +SD G+A +L +G+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--- 343
Query: 883 TMRTQTLATIGYMAPDEIFVGE 904
T T G+MAP E+ +GE
Sbjct: 344 TKTKGYAGTPGFMAP-ELLLGE 364
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 143
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + + +AT Y AP
Sbjct: 144 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 898 D 898
+
Sbjct: 201 E 201
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-----QCASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G V A + V +AIK P C TL+ E +++ RH N++ I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 788 ISSCSNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
ND +A +E M + L L + + + + C + I L+Y
Sbjct: 92 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKY 144
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAP 897
+H S ++H DLKPSN+LL+ + DFG+A++ + D + + +AT Y AP
Sbjct: 145 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 898 D 898
+
Sbjct: 202 E 202
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHP-QCASTLKSFEAECEVIKNIRHRNLVKIISSC 791
IG G +G V A + V +AIK P + + + E +++ RH N++ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI---- 90
Query: 792 SNDDFKALVLEYMSN---------GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
ND +A +E M + L L + + + + C + I L+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIH-- 145
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMAPD 898
S ++H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y AP+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 715 RFSYFELLRAT----DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSF 769
RF ++ L A D F + ++G GGFG V+ +++ G A K + + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 EA---ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLH---SSNCALNIF 823
+ E +++ + R +V + + LV+ M+ G + ++ N
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 824 CRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDES 882
+ I S LE+LH II+ DLKP NVLLD+D +SD G+A +L +G+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--- 343
Query: 883 TMRTQTLATIGYMAPDEIFVGE 904
T T G+MAP E+ +GE
Sbjct: 344 TKTKGYAGTPGFMAP-ELLLGE 364
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-----EDGV-EIAIKVFHPQC-ASTLKSFEAECEV 775
F NN+ +G G FG V A ED V ++A+K+ A ++ +E ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 776 IKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------LNIFCR 825
+ ++ +H N+V ++ +C++ ++ EY G L + L A L +
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885
L+ +A + +L S IH D+ NVLL VA + DFG+A+ + + ++
Sbjct: 155 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 886 TQTLATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 212 GNARLPVKWMAPESIF 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 715 RFSYFELLRAT----DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSF 769
RF ++ L A D F + ++G GGFG V+ +++ G A K + + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 EA---ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLH---SSNCALNIF 823
+ E +++ + R +V + + LV+ M+ G + ++ N
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 824 CRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDES 882
+ I S LE+LH II+ DLKP NVLLD+D +SD G+A +L +G+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--- 343
Query: 883 TMRTQTLATIGYMAPDEIFVGE 904
T T G+MAP E+ +GE
Sbjct: 344 TKTKGYAGTPGFMAP-ELLLGE 364
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
IG G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 95 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPE 197
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIR 780
+D + ++G G FG V + + G E A+KV + E+ E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+ K+ + + LV E + G L D + S F ++ I L +
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGIT 140
Query: 841 FGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ H I+H DLKP N+LL+ +D + DFG++ S + T Y+AP
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKXKDKIGTAYYIAP 197
Query: 898 D 898
+
Sbjct: 198 E 198
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++F+ + IIG GGFG VY R D K++ +C + + E + + R ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 243
Query: 786 KIISS-------CSNDDFK-----ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
++S+ C + F + +L+ M+ G L H +F ++ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFYAA 299
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ L H+ +++ DLKP+N+LLDE +SD G+A S + ++ T G
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHG 355
Query: 894 YMAPD 898
YMAP+
Sbjct: 356 YMAPE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++F+ + IIG GGFG VY R D K++ +C + + E + + R ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 243
Query: 786 KIISS-------CSNDDFK-----ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
++S+ C + F + +L+ M+ G L H +F ++ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFYAA 299
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ L H+ +++ DLKP+N+LLDE +SD G+A S + ++ T G
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHG 355
Query: 894 YMAPD 898
YMAP+
Sbjct: 356 YMAPE 360
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++F+ + IIG GGFG VY R D K++ +C + + E + + R ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 243
Query: 786 KIISS-------CSNDDFK-----ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
++S+ C + F + +L+ M+ G L H +F ++ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFYAA 299
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ L H+ +++ DLKP+N+LLDE +SD G+A S + ++ T G
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHG 355
Query: 894 YMAPD 898
YMAP+
Sbjct: 356 YMAPE 360
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV 785
++F+ + IIG GGFG VY R D K++ +C + + E + + R ++
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIML 242
Query: 786 KIISS-------CSNDDFK-----ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
++S+ C + F + +L+ M+ G L H +F ++ A
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFYAA 298
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+ L H+ +++ DLKP+N+LLDE +SD G+A S + ++ T G
Sbjct: 299 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHG 354
Query: 894 YMAPD 898
YMAP+
Sbjct: 355 YMAPE 359
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 715 RFSYFELLRAT----DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSF 769
RF ++ L A D F + ++G GGFG V+ +++ G A K + + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 EA---ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLH---SSNCALNIF 823
+ E +++ + R +V + + LV+ M+ G + ++ N
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 824 CRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDES 882
+ I S LE+LH II+ DLKP NVLLD+D +SD G+A +L +G+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--- 343
Query: 883 TMRTQTLATIGYMAPDEIFVGE 904
T T G+MAP E+ +GE
Sbjct: 344 TKTKGYAGTPGFMAP-ELLLGE 364
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHP--QCASTLKSFEAECEVIKNIRHRN 783
+F +++G G +G V A + EI AIK P + L++ E +++K+ +H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
++ I + D F+ Y+ ++ LH + + +I I L + H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRV-ISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL--SGEDES------TMRTQTLATIGYM 895
+ +IH DLKPSN+L++ + + DFG+A+++ S D S + T+ +AT Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 896 APD 898
AP+
Sbjct: 190 APE 192
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHP--QCASTLKSFEAECEVIKNIRHRN 783
+F +++G G +G V A + EI AIK P + L++ E +++K+ +H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
++ I + D F+ Y+ ++ LH + + +I I L + H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRV-ISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL--SGEDES------TMRTQTLATIGYM 895
+ +IH DLKPSN+L++ + + DFG+A+++ S D S + T+ +AT Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 896 APD 898
AP+
Sbjct: 190 APE 192
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 101 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPE 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIR 780
+D + ++G G FG V + + G E A+KV + E+ E +++K +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N++K+ + + LV E + G L D + S F ++ I L +
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGIT 164
Query: 841 FGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ H I+H DLKP N+LL+ +D + DFG++ S + T Y+AP
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTAYYIAP 221
Query: 898 D 898
+
Sbjct: 222 E 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK------SF 769
S F D++ +G G F V + R + G E A K + S+ +
Sbjct: 3 STFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 770 EAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM 829
E E +++ IRH N++ + N L+LE +S G L D L ++
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---------SLT 113
Query: 830 IDIASA-----LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH----LSDFGMAKLLSGED 880
D A+ L+ +H+ HS I H DLKP N++L + V + L DFG+A + +
Sbjct: 114 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKE 939
E T ++AP+ + L L+ D+ + ++ + LLSG K+
Sbjct: 174 EF---KNIFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGETKQ 224
Query: 940 QCLLSIFSLALECTMESPEKRID-AKDTITRLL 971
+ L +I ++ + E + AKD I RLL
Sbjct: 225 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLL 257
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 188 KWMALESIL 196
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 731 NNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEA---ECEVIKNIRHRNLVK 786
++I+G G +V+R R + G AIKVF+ S L+ + E EV+K + H+N+VK
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 787 I--ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNI----FCRLNIMIDIASALEYLH 840
+ I + K L++E+ GSL L + A + F L ++ D+ + +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF--LIVLRDVVGGMNHL- 128
Query: 841 FGHSTPIIHCDLKPSNVLL----DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
I+H ++KP N++ D V L+DFG A+ L ED+ T Y+
Sbjct: 129 --RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQF-VXLYGTEEYLH 183
Query: 897 PD 898
PD
Sbjct: 184 PD 185
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIR 780
+D + ++G G FG V + + G E A+KV + E+ E +++K +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N++K+ + + LV E + G L D + S F ++ I L +
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGIT 163
Query: 841 FGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ H I+H DLKP N+LL+ +D + DFG++ S + T Y+AP
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTAYYIAP 220
Query: 898 D 898
+
Sbjct: 221 E 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 95 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPE 197
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 186 KWMALESIL 194
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 187 KWMALESIL 195
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 694 RGKRGTMLSNDIILSSQPTIRRFSYFELLRATDNF---AENNIIGIGGFGSVYR-ARLED 749
+ KR + L+ DI P R + A ++F ++ I+G G FG V++
Sbjct: 55 KSKRTSALAVDIPAPPAPFDHRIVTAKQ-GAVNSFYTVSKTEILGGGRFGQVHKCEETAT 113
Query: 750 GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809
G+++A K+ + + + E V+ + H NL+++ + + + LV+EY+ G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVL-LDEDMVA-HL 867
D + + L + M I + ++ H I+H DLKP N+L ++ D +
Sbjct: 174 FDRIIDESYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKI 230
Query: 868 SDFGMAK 874
DFG+A+
Sbjct: 231 IDFGLAR 237
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIR 780
+D + ++G G FG V + + G E A+KV + E+ E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N++K+ + + LV E + G L D + S F ++ I L +
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGIT 140
Query: 841 FGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ H I+H DLKP N+LL+ +D + DFG++ S + T Y+AP
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTAYYIAP 197
Query: 898 D 898
+
Sbjct: 198 E 198
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 36/264 (13%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D++ +G G F V + R + G E A K + S+ + E E +++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA--- 835
IRH N++ + N L+LE +S G L D L ++ D A+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---------SLTEDEATQFLK 115
Query: 836 --LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH----LSDFGMAKLLSGEDESTMRTQTL 889
L+ +H+ HS I H DLKP N++L + V + L DFG+A + +E
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIF 172
Query: 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSL 948
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I ++
Sbjct: 173 GTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGETKQETLTNISAV 226
Query: 949 ALECTMESPEKRID-AKDTITRLL 971
+ E + AKD I RLL
Sbjct: 227 NYDFDEEYFSNTSELAKDFIRRLL 250
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 446 LDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVI 505
LDL N++ DE L EL+LN N +S NL +L+ L L SNR +
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 506 PSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQN 565
F L ++ DIS N + + +L + +++ N+L GL SL+
Sbjct: 97 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 156
Query: 566 ISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLS 617
++L L E+ ++ L L L + I+ SF++L LK L +S
Sbjct: 157 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 208
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 25/311 (8%)
Query: 209 AIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTL 268
A+P+ I T L + L N++ E +L+ L+L N ++ V P N+ L
Sbjct: 25 AVPEGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82
Query: 269 KEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFS 328
+ + L +N L +P + L NL L++ N + + L LE+G N
Sbjct: 83 RTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141
Query: 329 GFIPSAIGNLRNLKLFDIFFNNLTS-STPELGFLS------------------SLANCKK 369
A L +L+ + NLTS T L L S +
Sbjct: 142 YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201
Query: 370 LRYLGLGGNP-LDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNN 428
L+ L + P LD P+ + L+L+ L+I CN++ A+ +L L L+L N
Sbjct: 202 LKVLEISHWPYLDTMTPNCLYGLNLT--SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 429 LSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNL 488
+S L +LQ + L +LA P L+ L L+++GN+++ S ++
Sbjct: 260 ISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319
Query: 489 TSLQYLNLGSN 499
+L+ L L SN
Sbjct: 320 GNLETLILDSN 330
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 33/279 (11%)
Query: 289 ALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFF 348
+ P+LE L L N S P + N L L + SN L NL DI
Sbjct: 54 SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 113
Query: 349 NNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGN 408
N + L ++ + L+ L +G N L + L+ SLE+L + CN++
Sbjct: 114 NKIVIL---LDYM--FQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKCNLTSI 167
Query: 409 IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAF---------NKLAG---- 455
+A+ +L LIVL L N++ +F L +L+ L+++ N L G
Sbjct: 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT 227
Query: 456 ----------SIPD-EICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFV 504
++P + L L L+L+ N IS S L L LQ + L + V
Sbjct: 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287
Query: 505 IPSTFWNLKDILSFDISSN---LLDGPISLAIGNLKAVV 540
P F L + ++S N L+ + ++GNL+ ++
Sbjct: 288 EPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLI 326
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 48/324 (14%)
Query: 306 TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLA 365
+P I ++L L++G N + +L+ ++ N +++ P G ++L
Sbjct: 25 AVPEGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEP--GAFNNLF 80
Query: 366 NCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLG 425
N LR LGL N L +P + +L +L+I+ I + +L NL L +G
Sbjct: 81 N---LRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVG 136
Query: 426 GNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCL 485
N+L F GL L+ L L L SIP E LS L+ L +
Sbjct: 137 DNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIPTEA--LSHLHGLIV------------- 180
Query: 486 GNLTSLQYLNLGSNR-FTF-------VIPSTFWNLKDILSFDISSNLLDGPISLAIGNLK 537
L++LN+ + R ++F V+ + W D ++ + L +S+ NL
Sbjct: 181 ---LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT 237
Query: 538 AVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKI 597
AV + + L L+ ++L+YN + + L+ + L ++
Sbjct: 238 AVPYL-------------AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 284
Query: 598 SGSIPVSFEKLSYLKELNLSFNKL 621
+ P +F L+YL+ LN+S N+L
Sbjct: 285 AVVEPYAFRGLNYLRVLNVSGNQL 308
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 195 QLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGY-LQNLDVLQLGFNN 253
L+EL L N +S P NL L+ + L +N+L IP + L NL L + N
Sbjct: 57 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLIPLGVFTGLSNLTKLDISENK 115
Query: 254 LTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITN 313
+ ++ ++ LK + + +N L + R L +LE L L + + ++++
Sbjct: 116 IVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSH 174
Query: 314 ASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDI-FFNNLTSSTPELGF---LSSLA--NC 367
LI+L + + + + L LK+ +I + L + TP + L+SL+ +C
Sbjct: 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 368 K-------------KLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIG 414
LR+L L NP+ S + L L L+ + + ++ P A
Sbjct: 235 NLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL-LRLQEIQLVGGQLAVVEPYAFR 293
Query: 415 NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLA 454
L+ L VL++ GN L+ F + L+ L L N LA
Sbjct: 294 GLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 43 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 160
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 161 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 218 KWMALESIL 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRH 781
++F ++G G FG V R + G A+K+ + + E V++N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
L + + D V+EY + G L L R +I SALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTLATIGYMAPD 898
S +++ D+K N++LD+D ++DFG+ K G D +TM+T T Y+AP+
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLAPE 175
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 471 DLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPIS 530
DL+ +KI + S + T L+ L L N + + FW L +L ++S N L S
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 531 LAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESL 590
NL + +DLS N++ + GL +L+ ++L N+L+ F +TSL+ +
Sbjct: 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKI 400
Query: 591 DLSNNKISGSIPVSFEKLSYL-KELNLSFNKLKGEIPRGG 629
L N S P ++ YL + LN + K +G G
Sbjct: 401 WLHTNPWDCSCP----RIDYLSRWLNKNSQKEQGSAKCSG 436
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 113/267 (42%), Gaps = 31/267 (11%)
Query: 384 LPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKL 443
LP+++ + +E LN+ I A + L +G N + P F + L
Sbjct: 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119
Query: 444 QGLDLAFNKLAGSIPDEICL-LSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
L L N L+ S+P I +L L ++ N + TSLQ L L SNR T
Sbjct: 120 TVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178
Query: 503 FV----IPSTF-----WNLKDILSFDI----------SSNLLDGPISLAIGNLKAVVGID 543
V IPS F +NL L+ I S N++ GP+++ + LK
Sbjct: 179 HVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILK------ 232
Query: 544 LSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPV 603
L NNL+ L L + L+YN LE + F M LE L +SNN++ + +
Sbjct: 233 LQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNL 289
Query: 604 SFEKLSYLKELNLSFNKLKGEIPRGGP 630
+ + LK L+LS N L + R P
Sbjct: 290 YGQPIPTLKVLDLSHNHL-LHVERNQP 315
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 239 GYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNL 298
Y + L +GFN + + P N+ L + L N LS SLP I P L L++
Sbjct: 90 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSM 148
Query: 299 GINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPEL 358
N+ + + L L++ SN + S I +L F N++
Sbjct: 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL--------FHANVS-----Y 195
Query: 359 GFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSN 418
LS+LA + L N ++ G +++ L L + N++ + N
Sbjct: 196 NLLSTLAIPIAVEELDASHNSINVVR----GPVNVELTILKLQHNNLTDT--AWLLNYPG 249
Query: 419 LIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAG 455
L+ + L N L + F +Q+L+ L ++ N+L
Sbjct: 250 LVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 286
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 102 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 204
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 764 STLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNI 822
+TLK E ++++ + H N++++ + + F LV + M G L D L + L+
Sbjct: 69 ATLK----EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSE 123
Query: 823 FCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
IM + LE + H I+H DLKP N+LLD+DM L+DFG + L D
Sbjct: 124 KETRKIM---RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPG 177
Query: 883 TMRTQTLATIGYMAPDEI 900
+ T Y+AP+ I
Sbjct: 178 EKLREVCGTPSYLAPEII 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 764 STLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNI 822
+TLK E ++++ + H N++++ + + F LV + M G L D L + L+
Sbjct: 56 ATLK----EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSE 110
Query: 823 FCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
IM + LE + H I+H DLKP N+LLD+DM L+DFG + L D
Sbjct: 111 KETRKIM---RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPG 164
Query: 883 TMRTQTLATIGYMAPDEI 900
+ T Y+AP+ I
Sbjct: 165 EKLREVCGTPSYLAPEII 182
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 92 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPE 194
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 97 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ + E T +AT Y AP+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE 199
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 97 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ + E T +AT Y AP+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE 199
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 97 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ + E T +AT Y AP+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE 199
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 26/250 (10%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLVKIISS 790
+G G +G V R + VE AIK+ ST + + E V+K + H N++K+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 791 CSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849
+ LV+E G L ++ +H F ++ + I L + + H I+H
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAVIIKQVLSGVTYLHKHNIVH 159
Query: 850 CDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELS 906
DLKP N+LL ++D + + DFG++ + E++ M+ + L T Y+AP+
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMK-ERLGTAYYIAPE-------V 209
Query: 907 LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKR---IDA 963
L++ ++ V + V+ LL+G +Q +L + T +SPE + A
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG-KYTFDSPEWKNVSEGA 268
Query: 964 KDTITRLLKI 973
KD I ++L+
Sbjct: 269 KDLIKQMLQF 278
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPE 192
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 27/182 (14%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSC 791
IG G +G V+ + G ++A+KVF + S+ E E+ + + RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAA- 99
Query: 792 SNDDFKA--------LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF-- 841
D K L+ +Y NGSL D L S+ L+ L + S L +LH
Sbjct: 100 ---DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 842 --GHSTPII-HCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMRTQT-LATIGYMA 896
P I H DLK N+L+ ++ ++D G+A K +S +E + T + T YM
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 897 PD 898
P+
Sbjct: 215 PE 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 101 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 203
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 96 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPE 198
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAEN-NIIGIGGFGSVYRA-RLEDGVEIA 754
RG+ +S + +PT R + + +N + +G G +GSV A + G+ +A
Sbjct: 17 RGSHMSQE-----RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA 71
Query: 755 IKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
+K S + K E ++K+++H N++ ++ + A LE ++ L
Sbjct: 72 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT----PARSLEEFNDVYL--V 125
Query: 813 LHSSNCALNIFCRLNIMID------IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
H LN + + D I L L + HS IIH DLKPSN+ ++ED
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+ DFG+A+ E T +AT Y AP+
Sbjct: 186 ILDFGLARHTDDE-----MTGYVATRWYRAPE 212
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 92 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 194
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 102 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 102 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 204
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 92 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 194
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV + ++ G++IA+K S + K E ++K+++H N++ ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 119 FT----PATSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 86 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 188
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 88 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 190
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAEN-NIIGIGGFGSVYRA-RLEDGVEIA 754
RG+ +S + +PT R + + +N + +G G +GSV A + G+ +A
Sbjct: 16 RGSHMSQE-----RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA 70
Query: 755 IKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
+K S + K E ++K+++H N++ ++ + A LE ++ L
Sbjct: 71 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT----PARSLEEFNDVYL--V 124
Query: 813 LHSSNCALNIFCRLNIMID------IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
H LN + + D I L L + HS IIH DLKPSN+ ++ED
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
Query: 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+ DFG+A+ E T +AT Y AP+
Sbjct: 185 ILDFGLARHTDDE-----MTGYVATRWYRAPE 211
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 113 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 87 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 189
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 97 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 199
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 87 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 189
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 96 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 198
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 727 NFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHP--QCASTLKSFEAECEVIKNIRHRN 783
+F +++G G +G V A + EI AIK P + L++ E +++K+ +H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
++ I + D F+ Y+ ++ LH + + +I I L + H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRV-ISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL--SGEDESTMRTQT------LATIGYM 895
+ +IH DLKPSN+L++ + + DFG+A+++ S D S Q +AT Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 896 APD 898
AP+
Sbjct: 190 APE 192
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 92 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 194
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 95 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 197
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 95 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 89 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 191
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 186 KWMALESIL 194
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 186 KWMALESIL 194
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 713 IRRFSY---FELLRATDNFAENNIIGIGGFGSVYRA------RLEDGVEIAIKVFHPQC- 762
R + Y +E R +N ++G G FG V A + +++A+K+ +
Sbjct: 31 FREYEYDLKWEFPR--ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD 88
Query: 763 ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSL------------ 809
+S ++ +E +++ + H N+V ++ +C+ L+ EY G L
Sbjct: 89 SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFS 148
Query: 810 EDCLHSSNCA-------LNIFCRLNIM---IDIASALEYLHFGHSTPIIHCDLKPSNVLL 859
ED + N LN+ +++ +A +E+L F +H DL NVL+
Sbjct: 149 EDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLV 205
Query: 860 DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLK 908
V + DFG+A+ + + +R + +MAP+ +F G ++K
Sbjct: 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 188 KWMALESIL 196
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E C N LN + + ID + LE +H
Sbjct: 77 YEITDQYIYMVME---------C---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 124
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + T+ YM P+ I
Sbjct: 125 HQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + +A + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 139
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 904 ELS-------------------LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS 944
S + W+ L ++ +DK E + E C
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDK-----EGERLPRPEDCPQD 253
Query: 945 IFSLALECTMESPEKR 960
I+++ ++C PE R
Sbjct: 254 IYNVMVQCWAHKPEDR 269
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQ------CASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G VY+A+ G A+K + ++T++ E ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR----EISILKELKHSNIVKL 65
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
LV E++ L+ L L + ++ + + + Y H +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRV 121
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+H DLKP N+L++ + ++DFG+A+ T + T+ Y APD
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPD 170
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 764 STLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNI 822
+TLK E ++++ + H N++++ + + F LV + M G L D L + L+
Sbjct: 69 ATLK----EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSE 123
Query: 823 FCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882
IM + LE + H I+H DLKP N+LLD+DM L+DFG + L D
Sbjct: 124 KETRKIM---RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPG 177
Query: 883 TMRTQTLATIGYMAPDEI 900
T Y+AP+ I
Sbjct: 178 EKLRSVCGTPSYLAPEII 195
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 191 KWMALESIL 199
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + +A + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 904 ELS-------------------LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS 944
S + W+ L ++ +DK E + E C
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDK-----EGERLPRPEDCPQD 243
Query: 945 IFSLALECTMESPEKR 960
I+++ ++C PE R
Sbjct: 244 IYNVMVQCWAHKPEDR 259
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 723 RATDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNI 779
R T+ + +G G F V R ++ G E A + + + A + E E + + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEY 838
+H N+V++ S S + L+ + ++ G L ED + A + + I LE
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV-----AREYYSEADASHCIQQILEA 122
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDM---VAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895
+ H ++H +LKP N+LL + L+DFG+A + GE ++ T GY+
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYL 180
Query: 896 APD 898
+P+
Sbjct: 181 SPE 183
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 186 KWMALESIL 194
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 187 KWMALESIL 195
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 133 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 190 KWMALESIL 198
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 727 NFAENNI-----IGIGGFGSVYRARL-----EDGV-EIAIKVFHPQC-ASTLKSFEAECE 774
F NN+ +G G FG V A ED V ++A+K+ A ++ +E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 775 VIKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---------LNIFC 824
++ ++ +H N+V ++ +C++ ++ EY G L + L A L +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 825 RLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
L+ +A + +L S IH D+ NVLL VA + DFG+A+ + + +
Sbjct: 162 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 885 RTQTLATIGYMAPDEIF 901
+ + +MAP+ IF
Sbjct: 219 KGNARLPVKWMAPESIF 235
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 187 KWMALESIL 195
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 37/272 (13%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK------SFE 770
YF+ + D++ +G G F V + R + G E A K + + + E
Sbjct: 19 YFQSM-VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 771 AECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E +++ IRH N++ + N L+LE +S G L D L ++
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---------SLTE 128
Query: 831 DIASA-----LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH----LSDFGMAKLLSGEDE 881
D A+ L+ +H+ HS I H DLKP N++L + V + L DFG+A + +E
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQ 940
T ++AP+ + L L+ D+ + ++ + LLSG K++
Sbjct: 189 F---KNIFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGETKQE 239
Query: 941 CLLSIFSLALECTMESPEKRID-AKDTITRLL 971
L +I ++ + E + AKD I RLL
Sbjct: 240 TLTNISAVNYDFDEEYFSNTSELAKDFIRRLL 271
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 187 KWMALESIL 195
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---ECE 774
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
V+ ++ + ++ +++ C + L+ + M G L D + + LN + IA
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
+ YL ++H DL NVL+ ++DFG+AKLL E++ I +
Sbjct: 154 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 895 MAPDEIF 901
MA + I
Sbjct: 211 MALESIL 217
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 712 TIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA 771
T+ F Y +LL F + ++ G Y ++ ++ + V + A TL
Sbjct: 146 TMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL----T 197
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-I 830
E V++N RH L + S D V+EY + G L H S + R
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA 255
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTL 889
+I SAL+YLH +++ DLK N++LD+D ++DFG+ K G +D +TM+T
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-FC 310
Query: 890 ATIGYMAPD 898
T Y+AP+
Sbjct: 311 GTPEYLAPE 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 712 TIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA 771
T+ F Y +LL F + ++ G Y ++ ++ + V + A TL
Sbjct: 149 TMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL----T 200
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-I 830
E V++N RH L + S D V+EY + G L H S + R
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA 258
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTL 889
+I SAL+YLH +++ DLK N++LD+D ++DFG+ K G +D +TM+T
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-FC 313
Query: 890 ATIGYMAPD 898
T Y+AP+
Sbjct: 314 GTPEYLAPE 322
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 767 KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++ + E + K + H N+VK + + L LEY S G L D +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP----------- 97
Query: 827 NIMIDIASALEYLH-------FGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879
+I + A + H + H I H D+KP N+LLDE +SDFG+A +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 880 DESTMRTQTLATIGYMAPD 898
+ + + T+ Y+AP+
Sbjct: 158 NRERLLNKMCGTLPYVAPE 176
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQ------CASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G VY+A+ G A+K + ++T++ E ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR----EISILKELKHSNIVKL 65
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
LV E++ L+ L L + ++ + + + Y H +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRV 121
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+H DLKP N+L++ + ++DFG+A+ T + T+ Y APD
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPD 170
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQ------CASTLKSFEAECEVIKNIRHRNLVKI 787
IG G +G VY+A+ G A+K + ++T++ E ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR----EISILKELKHSNIVKL 65
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
LV E++ L+ L L + ++ + + + Y H +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRV 121
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+H DLKP N+L++ + ++DFG+A+ T + T+ Y APD
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPD 170
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 8 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+++ M G L D + + LN +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 183 PIKWMALESIL 193
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 194 KWMALESIL 202
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 715 RFSYFELLRATDN-FAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA-- 771
++ + E T N F + ++G GGFG V ++ ++ + + EA
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 772 --ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLE-DCLHSSNCALNIFCRLNI 828
E ++++ + R +V + + D LVL M+ G L+ H +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+I LE LH I++ DLKP N+LLD+ +SD G+A + E
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGR 345
Query: 889 LATIGYMAPD 898
+ T+GYMAP+
Sbjct: 346 VGTVGYMAPE 355
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 217/516 (42%), Gaps = 86/516 (16%)
Query: 187 PSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDV 246
P++ ++ QL L G+N++S P+ L +L+ ++L +N+L Q + NL
Sbjct: 42 PTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTE 101
Query: 247 LQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGS----------------LPSRIDLAL 290
L L N++ + N L ++ L +N LS + ++I LAL
Sbjct: 102 LDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKI-LAL 160
Query: 291 PNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNN 350
+ E LG S L L++ SN F P + KLF + NN
Sbjct: 161 RSEELEFLG--------------NSSLRKLDLSSNPLKEFSPGCFQTIG--KLFALLLNN 204
Query: 351 LTSSTPEL--GFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLS-LERLNIAFCNISG 407
P L L+N ++ L L N L S+ L + L +L++++ N+
Sbjct: 205 -AQLNPHLTEKLCWELSNT-SIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHD 262
Query: 408 NIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDL--AFNKLAGSIPDE----- 460
+ L +L LSL NN+ P +F GL L+ L L AF K + S+
Sbjct: 263 VGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDD 322
Query: 461 --ICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT---FVIPSTFWNLKD- 514
L L L+++ N I + S+ L SL+YL+L S FT + TF +L
Sbjct: 323 FSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSL-SKTFTSLQTLTNETFVSLAHS 381
Query: 515 -ILSFDISSN----LLDGPISLAIGNLKAV-VGIDLSRNNLSGNIPTTLEGLKSLQNISL 568
+L+ +++ N + +G S +G L+ + +G++ LSG GL+++ I L
Sbjct: 382 PLLTLNLTKNHISKIANGTFSW-LGQLRILDLGLNEIEQKLSGQ---EWRGLRNIFEIYL 437
Query: 569 AYNRLEGPIPESFGNMTSLESL-----DLSNNKISGSIPVSFEKLSYLKELNLSFNKLKG 623
+YN+ SF + SL+ L L N IS P F L L L+LS N +
Sbjct: 438 SYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDIS---PSPFRPLRNLTILDLSNNNIAN 494
Query: 624 EIPRGGPFANFTAESFMGNELLCGLPNLQVPPCKHS 659
+ +LL GL NL++ +H+
Sbjct: 495 ----------------INEDLLEGLENLEILDFQHN 514
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 166/650 (25%), Positives = 259/650 (39%), Gaps = 93/650 (14%)
Query: 57 NASICSWIGI--ICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIP 114
N + CS + + I D +T LNL+ L+ P S L LD N +S P
Sbjct: 7 NVADCSHLKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEP 66
Query: 115 SSIFTMSTLKVLYLMDNQLSG-SLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLK 173
+ LKVL L N+LS S +F F T+ L
Sbjct: 67 ELCQILPLLKVLNLQHNELSQISDQTFVFCTN--------------------------LT 100
Query: 174 HLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGE 233
L L N + + K L +L L +N LS L LQ + L NK+
Sbjct: 101 ELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILAL 160
Query: 234 IPQEIGYLQN--LDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRI----- 286
+E+ +L N L L L N L P + L + L N L+ L ++
Sbjct: 161 RSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELS 220
Query: 287 -----DLALPNLEFLNLGINSFSGTIPSSIT--NASKLILLEMGSNSFSGFIPS------ 333
+L+L N + L ++FSG +++T + S L ++G+ SFS ++PS
Sbjct: 221 NTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFS-YLPSLRYLSL 279
Query: 334 --------------AIGNLRNLKLFDIFFNNLTS--STPELGFLSSLANCKKLRYLGLGG 377
+ NLR L L F S S P + S K L YL +
Sbjct: 280 EYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDF-SFQWLKYLEYLNMD- 337
Query: 378 NPLDGFLPSSIGN-----LSLSLERLNIAFCNISGNIPKAIGNLSN--LIVLSLGGNNLS 430
D +PS+ N +SL L+ F ++ + +L++ L+ L+L N++S
Sbjct: 338 ---DNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHIS 394
Query: 431 GSIPVTFGGLQKLQGLDLAFNKLAGSIP-DEICLLSRLNELDLNGNKISGSISSCLGNLT 489
TF L +L+ LDL N++ + E L + E+ L+ NK +S +
Sbjct: 395 KIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVP 454
Query: 490 SLQYLNLGSNRFTFV--IPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRN 547
SLQ L L V PS F L+++ D+S+N + + L+ + +D N
Sbjct: 455 SLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHN 514
Query: 548 NLS--------GNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISG 599
NL+ G L+GL L ++L N L+ F N+ L+S++L N ++
Sbjct: 515 NLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLGLNNLNK 574
Query: 600 SIPVSFEKLSYLKELNLSFNKLKGEIPR---GGPFANFTAESFMGNELLC 646
P F+ + L+ LNL N L + + G PF N + N C
Sbjct: 575 LEPFIFDDQTSLRSLNLQKN-LITSVEKDVFGPPFQNLNSLDMRFNPFDC 623
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 67/293 (22%)
Query: 397 RLNIAFC------NISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAF 450
R N+A C +I ++P SN+ VL+L N L P F +L LD F
Sbjct: 5 RYNVADCSHLKLTHIPDDLP------SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGF 58
Query: 451 NKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFW 510
N ++ P+ +L L L+L N++S T+L L+L SN + + F
Sbjct: 59 NSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFK 118
Query: 511 NLKDILSFDISSNLLDGP---------------------ISLAIGNLK-----AVVGIDL 544
N K+++ D+S N L ++L L+ ++ +DL
Sbjct: 119 NQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDL 178
Query: 545 SRNNLSGNIPTTLEGL---------------------------KSLQNISLAYNRLEGPI 577
S N L P + + S+QN+SLA N+L
Sbjct: 179 SSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATS 238
Query: 578 PESFGNM--TSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRG 628
+F + T+L LDLS N + SF L L+ L+L +N ++ PR
Sbjct: 239 ESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRS 291
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 8 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+++ M G L D + + LN +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 183 PIKWMALESIL 193
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+++ M G L D + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 182 PIKWMALESIL 192
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + +A + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 133
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 904 ELS-------------------LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS 944
S + W+ L ++ +DK E + E C
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDK-----EGERLPRPEDCPQD 247
Query: 945 IFSLALECTMESPEKR 960
I+++ ++C PE R
Sbjct: 248 IYNVMVQCWAHKPEDR 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + +A + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 904 ELS-------------------LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS 944
S + W+ L ++ +DK E + E C
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDK-----EGERLPRPEDCPQD 243
Query: 945 IFSLALECTMESPEKR 960
I+++ ++C PE R
Sbjct: 244 IYNVMVQCWAHKPEDR 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + +A + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 139
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 904 ELS-------------------LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS 944
S + W+ L ++ +DK E + E C
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDK-----EGERLPRPEDCPQD 253
Query: 945 IFSLALECTMESPEKR 960
I+++ ++C PE R
Sbjct: 254 IYNVMVQCWAHKPEDR 269
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 96 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 734 IGIGGFGSVYRARLEDGVEI-AIKV--FHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
IG G +G+V++A+ + EI A+K S E ++K ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHC 850
+D LV E+ + L+ S N L+ + + + L+ L F HS ++H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 851 DLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGEL---SL 907
DLKP N+L++ + L+DFG+A+ + + T+ Y PD +F +L S+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 908 KRW 910
W
Sbjct: 184 DMW 186
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 734 IGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVK 786
+G G FG V R + V +A+K P S + F E + ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCL--HSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ K +V E GSL D L H + L R + +A + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTMRTQTLATIGYMAPDEIFVG 903
IH DL N+LL + + DFG+ + L +D M+ + AP+ +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 904 ELS-------------------LKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLS 944
S + W+ L ++ +DK E + E C
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDK-----EGERLPRPEDCPQD 243
Query: 945 IFSLALECTMESPEKR 960
I+++ ++C PE R
Sbjct: 244 IYNVMVQCWAHKPEDR 259
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E C N LN + + ID + LE +H
Sbjct: 124 YEITDQYIYMVME---------C---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + T+ YM P+ I
Sbjct: 172 HQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 707 LSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTL 766
L S+ T+ F Y +LL F + ++ G Y ++ ++ + V + A TL
Sbjct: 1 LGSRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL 56
Query: 767 KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
E V++N RH L + S D V+EY + G L H S + R
Sbjct: 57 ----TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 110
Query: 827 NIM-IDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTM 884
+I SAL+YLH +++ DLK N++LD+D ++DFG+ K G +D +TM
Sbjct: 111 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATM 166
Query: 885 RTQTLATIGYMAPD 898
+ T Y+AP+
Sbjct: 167 KX-FCGTPEYLAPE 179
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCASTLKSFEAECEVIKN------ 778
++F + ++G G FG V+ A + + AIK L + EC +++
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV--VLMDDDVECTMVEKRVLSLA 75
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
H L + + + V+EY++ G L H +C R A +
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYA--AEIILG 131
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L F HS I++ DLK N+LLD+D ++DFGM K D T + T Y+AP
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIAP- 188
Query: 899 EIFVGE 904
EI +G+
Sbjct: 189 EILLGQ 194
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 728 FAENNIIGIGGFGSVYRARLEDGVE--IAIKVFH-PQCASTLKSFEAECEVIKNIRHRNL 784
F + IG G FG V++ +++ + +AIK+ + ++ + E V+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
K S D +++EY+ GS D L L+ I+ +I L+YLH S
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---S 122
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
IH D+K +NVLL E L+DFG+A L+ D R + T +MAP+ I
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVI 176
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 728 FAENNIIGIGGFGSVYRARLEDGVE--IAIKVFH-PQCASTLKSFEAECEVIKNIRHRNL 784
F + IG G FG V++ +++ + +AIK+ + ++ + E V+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
K S D +++EY+ GS D L L+ I+ +I L+YLH S
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---S 122
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
IH D+K +NVLL E L+DFG+A L+ D R + T +MAP+ I
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVI 176
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + D+G+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 728 FAENNIIGIGGFGSVYRARLEDGVE--IAIKVFH-PQCASTLKSFEAECEVIKNIRHRNL 784
F + IG G FG V++ +++ + +AIK+ + ++ + E V+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
K S D +++EY+ GS D L L+ I+ +I L+YLH S
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---S 137
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
IH D+K +NVLL E L+DFG+A L+ D R + T +MAP+ I
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVI 191
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G V A G ++A+K + + E ++++ H N+V + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
D +V+E++ G+L D + ++ +N + + + AL YLH + +IH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
K ++LL D LSDFG +S E R + T +MAP+ I
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVS--KEVPKRKXLVGTPYWMAPEVI 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR 780
+D + ++G G FG V + + G E A+KV + + +S E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N++K+ + + LV E + G L D + S F ++ I L +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGIT 146
Query: 841 FGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
+ H I+H DLKP N+LL+ +D + DFG++ E M+ + + T Y+AP
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDK-IGTAYYIAP 203
Query: 898 D 898
+
Sbjct: 204 E 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 734 IGIGGFGSVYRAR---LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
+G G +G V A E+ V + I V + ++ + E + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-------FGH 843
+ + L LEY S G L D + +I + A + H + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
I H D+KP N+LLDE +SDFG+A + + + + T+ Y+AP+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 715 RFSYFELLRATDN-FAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA-- 771
++ + E T N F + ++G GGFG V ++ ++ + + EA
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 772 --ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLE-DCLHSSNCALNIFCRLNI 828
E ++++ + R +V + + D LVL M+ G L+ H +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
+I LE LH I++ DLKP N+LLD+ +SD G+A + E
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGR 345
Query: 889 LATIGYMAPD 898
+ T+GYMAP+
Sbjct: 346 VGTVGYMAPE 355
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAEN-NIIGIGGFGSVYRA-RLEDGVEIA 754
RG+ +S + +PT R + + +N + +G G +GSV A + G +A
Sbjct: 17 RGSHMSQE-----RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVA 71
Query: 755 IKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
+K S + K E ++K+++H N++ ++ + A LE ++ L
Sbjct: 72 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT----PARSLEEFNDVYL--V 125
Query: 813 LHSSNCALNIFCRLNIMID------IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
H LN + + D I L L + HS IIH DLKPSN+ ++ED
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+ DFG+A+ E T +AT Y AP+
Sbjct: 186 ILDFGLARHTDDE-----MTGYVATRWYRAPE 212
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAEN-NIIGIGGFGSVYRA-RLEDGVEIA 754
RG+ +S + +PT R + + +N + +G G +GSV A + G +A
Sbjct: 16 RGSHMSQE-----RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVA 70
Query: 755 IKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
+K S + K E ++K+++H N++ ++ + A LE ++ L
Sbjct: 71 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT----PARSLEEFNDVYL--V 124
Query: 813 LHSSNCALNIFCRLNIMID------IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
H LN + + D I L L + HS IIH DLKPSN+ ++ED
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
Query: 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+ DFG+A+ E T +AT Y AP+
Sbjct: 185 ILDFGLARHTDDE-----MTGYVATRWYRAPE 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKV-FHPQCAS--TLKSFEAECEVIKNIRH 781
D+F +G G FG+VY AR ++ +A+KV F Q E E+ ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
N++++ + + L+LE+ G L L + M ++A AL H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL---HY 129
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H +IH D+KP N+L+ ++DFG S S R T+ Y+ P+ I
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPPEMI 184
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKV-FHPQCAS--TLKSFEAECEVIKNIRH 781
D+F +G G FG+VY AR ++ +A+KV F Q E E+ ++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
N++++ + + L+LE+ G L L + M ++A AL H+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL---HY 130
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H +IH D+KP N+L+ ++DFG S S R T+ Y+ P+ I
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPPEMI 185
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH-PQCASTLKSFEAECEVIKNIR 780
R +F +G GGFG V+ A+ + D AIK P + E + + +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 781 H------------RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCR--- 825
H +N + + S + + ++ +L+D + + C + R
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM-NGRCTIEERERSVC 120
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL-SGEDESTM 884
L+I + IA A+E+LH S ++H DLKPSN+ D V + DFG+ + E+E T+
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 885 ---------RTQTLATIGYMAPDEI 900
T + T YM+P++I
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQI 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKII 788
+G GGF + D E+ P+ + E + +++ H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
++DF +VLE SL + LH AL + I +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
H DLK N+ L+ED+ + DFG+A + + E R +TL T Y+AP+
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPE 187
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKII 788
+G GGF + D E+ P+ + E + +++ H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
++DF +VLE SL + LH AL + I +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
H DLK N+ L+ED+ + DFG+A + + E R +TL T Y+AP+
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPE 187
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 25/246 (10%)
Query: 694 RGKRGTMLSN------DIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYR-AR 746
RGK GT+ SN DI P + +L D++ + +G G FG V+R
Sbjct: 123 RGK-GTVSSNYDNYVFDIWKQYYPQPVEIKHDHVL---DHYDIHEELGTGAFGVVHRVTE 178
Query: 747 LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806
G A K S ++ E + + +RH LV + + +D+ ++ E+MS
Sbjct: 179 RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238
Query: 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
G L + + + ++ + M + L ++ H +H DLKP N++
Sbjct: 239 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNE 295
Query: 867 LS--DFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD 924
L DFG+ L D T T + AP+ V E + D+ V ++ +
Sbjct: 296 LKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPE---VAEGKPVGYYTDMWSVGVLSYI- 348
Query: 925 KSLLSG 930
LLSG
Sbjct: 349 --LLSG 352
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 86 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 188
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKII 788
+G GGF + D E+ P+ + E + +++ H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
++DF +VLE SL + LH AL + I +YLH +I
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 143
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
H DLK N+ L+ED+ + DFG+A + + E R +TL T Y+AP+
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPE 191
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 191 KWMALESIL 199
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E C N LN + + ID + LE +H
Sbjct: 124 YEITDQYIYMVME---------C---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + T+ YM P+ I
Sbjct: 172 HQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 25/246 (10%)
Query: 694 RGKRGTMLSN------DIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYR-AR 746
RGK GT+ SN DI P + +L D++ + +G G FG V+R
Sbjct: 17 RGK-GTVSSNYDNYVFDIWKQYYPQPVEIKHDHVL---DHYDIHEELGTGAFGVVHRVTE 72
Query: 747 LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806
G A K S ++ E + + +RH LV + + +D+ ++ E+MS
Sbjct: 73 RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 132
Query: 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
G L + + + ++ + M + L ++ H +H DLKP N++
Sbjct: 133 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNE 189
Query: 867 LS--DFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD 924
L DFG+ L D T T + AP+ V E + D+ V ++ +
Sbjct: 190 LKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPE---VAEGKPVGYYTDMWSVGVLSYI- 242
Query: 925 KSLLSG 930
LLSG
Sbjct: 243 --LLSG 246
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 728 FAENNIIGIGGFGSVYRARLEDGVE--IAIKVFH-PQCASTLKSFEAECEVIKNIRHRNL 784
F + IG G FG V++ +++ + +AIK+ + ++ + E V+ +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
K S +++EY+ GS D L + + F ++ +I L+YLH S
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH---S 138
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
IH D+K +NVLL E L+DFG+A L+ D R + T +MAP+ I
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVI 192
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 100 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 202
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 186 KWMALESIL 194
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 716 FSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVF----HPQCASTLKSFEA 771
+ Y+++L +G G FG V+R + + + F +P T+K+
Sbjct: 50 YDYYDILEE---------LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN--- 97
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E ++ + H L+ + + + L+LE++S G L D + + + ++ +N M
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLS--DFGMAKLLSGEDESTMRTQTL 889
L+++H HS I+H D+KP N++ + + + DFG+A L+ ++ + T
Sbjct: 158 ACEGLKHMH-EHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTT 211
Query: 890 ATIGYMAPD 898
AT + AP+
Sbjct: 212 ATAEFAAPE 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNI----- 779
DNF ++G G FG V AR+ E G A+KV L+ + EC + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--ILQDDDVECTMTEKRILSLA 80
Query: 780 -RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
H L ++ D V+E+++ G L + S R +I SAL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK--LLSGEDESTMRTQTLATIGYMA 896
LH II+ DLK NVLLD + L+DFGM K + +G +T T Y+A
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF----CGTPDYIA 192
Query: 897 PD 898
P+
Sbjct: 193 PE 194
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 734 IGIGGFGSVYR--ARLEDGVEI--AIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS 789
+G G + +VY+ ++L D + I++ H + A + E ++K+++H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC--TAIREVSLLKDLKHANIVTLHD 67
Query: 790 SCSNDDFKALVLEYMSNG---SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP 846
+ LV EY+ L+DC NI N+ + + L L + H
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCG-------NIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 847 IIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
++H DLKP N+L++E L+DFG+A+ S ++ + T+ Y PD
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY--DNEVVTLWYRPPD 170
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + ++ E +V+
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 185
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 237
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 114/272 (41%), Gaps = 41/272 (15%)
Query: 384 LPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKL 443
LP+++ + +E LN+ I A + L +G N + P F + L
Sbjct: 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 125
Query: 444 QGLDLAFNKLAGSIPDEICL-LSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
L L N L+ S+P I +L L ++ N + TSLQ L L SNR T
Sbjct: 126 TVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184
Query: 503 FV----IPSTF-----WNLKDILSFDISSNLLD----------GPISLAIGNLKAVVGID 543
V IPS F +NL L+ I+ LD GP+++ + LK
Sbjct: 185 HVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILK------ 238
Query: 544 LSRNNLSG-----NIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKIS 598
L NNL+ N P +E + L+YN LE + F M LE L +SNN++
Sbjct: 239 LQHNNLTDTAWLLNYPGLVE-------VDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 291
Query: 599 GSIPVSFEKLSYLKELNLSFNKLKGEIPRGGP 630
+ + + + LK L+LS N L + R P
Sbjct: 292 A-LNLYGQPIPTLKVLDLSHNHL-LHVERNQP 321
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 46/240 (19%)
Query: 239 GYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNL 298
Y + L +GFN + + P N+ L + L N LS SLP I P L L++
Sbjct: 96 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSM 154
Query: 299 GINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPEL 358
N+ + + L L++ SN + S I +L F N++
Sbjct: 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL--------FHANVS-----Y 201
Query: 359 GFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSN 418
LS+LA +P ++ L S +N+ + G + N+
Sbjct: 202 NLLSTLA------------------IPIAVEELDASHNSINV----VRGPV-----NVE- 233
Query: 419 LIVLSLGGNNLSGSIP-VTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKI 477
L +L L NNL+ + + + GL + +DL++N+L + + RL L ++ N++
Sbjct: 234 LTILKLQHNNLTDTAWLLNYPGLVE---VDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
DNF + IG G G V A + G +A+K + + E ++++ +H N+
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
V++ +S D +V+E++ G+L D + ++ +N + + + AL LH +
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---A 188
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
+IH D+K ++LL D LSDFG +S E R + T +MAP+ I
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELI 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 113 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E +AT Y AP+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPE 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++ G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+++ M G L D + + LN + I
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 191 KWMALESIL 199
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E N LN + + ID + LE +H
Sbjct: 76 YEITDQYIYMVME------------CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + T+ YM P+ I
Sbjct: 124 HQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-----EDGV-EIAIKVFHPQC-ASTLKSFEAECEV 775
F NN+ +G G FG V A ED V ++A+K+ A ++ +E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 776 IKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL---------------HSSNCA 819
+ ++ +H N+V ++ +C++ ++ EY G L + L H+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 820 LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879
L+ L+ +A + +L S IH D+ NVLL VA + DFG+A+ + +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 880 DESTMRTQTLATIGYMAPDEIF 901
++ + +MAP+ IF
Sbjct: 220 SNYIVKGNARLPVKWMAPESIF 241
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + +++ E +V+
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 126
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
H I+H D+KPSN+L++ L DFG +SG+ M + + T YM+P+ +
Sbjct: 127 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDEMANEFVGTRSYMSPERLQG 180
Query: 903 GELSLKR--WVNDLL------------PVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSL 948
S++ W L P+++ E++D + K +A +FSL
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSA-------VFSL 233
Query: 949 ALE-----CTMESPEKRIDAK 964
+ C +++P +R D K
Sbjct: 234 EFQDFVNKCLIKNPAERADLK 254
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 728 FAENNIIGIGGFGSVYRARLEDGVEI-AIKVFH-PQCASTLKSFEAECEVIKNIRHRNLV 785
F + + IG G FG VY+ E+ AIK+ + ++ + E V+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
+ S +++EY+ GS D L I+ +I L+YLH S
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA--TILREILKGLDYLH---SE 135
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
IH D+K +NVLL E L+DFG+A L+ D R + T +MAP+ I
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVI 188
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 182 PIKWMALESIL 192
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKV--FHPQCASTLKSFEAECEVIKNIRHRNLVK---- 786
IG G +G + R + DG + K + + + +E +++ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---LNIFCRLNIMIDIASALEYLHF-- 841
II + + +V+EY G L + L+ L +M + AL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 842 --GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
GH+ ++H DLKP+NV LD L DFG+A++L+ +++ + + T YM+P++
Sbjct: 132 DGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPEQ 187
Query: 900 I 900
+
Sbjct: 188 M 188
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + +++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + +++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + ++ E +V+
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 150
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 151 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 202
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E N LN + + ID + LE +H
Sbjct: 96 YEITDQYIYMVME------------CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + T+ YM P+ I
Sbjct: 144 HQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + ++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKV--FHPQCASTLKSFEAECEVIKNIRHRNLVK---- 786
IG G +G + R + DG + K + + + +E +++ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---LNIFCRLNIMIDIASALEYLHF-- 841
II + + +V+EY G L + L+ L +M + AL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 842 --GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
GH+ ++H DLKP+NV LD L DFG+A++L+ D S +T + T YM+P++
Sbjct: 132 DGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKT-FVGTPYYMSPEQ 187
Query: 900 I 900
+
Sbjct: 188 M 188
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + +++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 4 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 62
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 122 QIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 179 PIKWMALESIL 189
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 182 PIKWMALESIL 192
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 1 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 59
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 176 PIKWMALESIL 186
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 182 PIKWMALESIL 192
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + ++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRN 783
D+F + + +G G G V++ + G+ +A K+ H + +++ E +V+
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 142
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YM+P+ +
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 194
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E N LN + + ID + LE +H
Sbjct: 80 YEITDQYIYMVME------------CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 127
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + T+ YM P+ I
Sbjct: 128 HQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+ + E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPE 192
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 96 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 198
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKV-FHPQCAS--TLKSFEAECEVIKNIRH 781
D+F +G G FG+VY AR ++ +A+KV F Q E E+ ++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
N++++ + + L+LE+ G L L + M ++A AL H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL---HY 129
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H +IH D+KP N+L+ ++DFG S S R T+ Y+ P+ I
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPPEMI 184
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 15/178 (8%)
Query: 732 NIIGIGGFGSVYRA-RLEDGVEIAIKV-----FHPQCASTLKSFEAECEVIKNIRHRNLV 785
+IG G F V R E G + A+K+ F + + + E + ++H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID--IASALEYLHFGH 843
+++ + S+D +V E+M L C A F + + LE L + H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 844 STPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH D+KP NVLL + L DFG+A L + + + T +MAP+
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMAPE 203
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 86 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E T +AT Y AP+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPE 188
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 720 ELLRATDNFAENNI-IGIGGFGSV----YRARLEDGVEIAIKVFHPQC-ASTLKSFEAEC 773
+L DN +I +G G FGSV YR R + +++AIKV + + E
Sbjct: 3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
+++ + + +V++I C + LV+E G L L + + ++ ++
Sbjct: 62 QIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 120
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATI 892
++YL +H DL NVLL A +SDFG++K L +D T R+ +
Sbjct: 121 MGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177
Query: 893 GYMAPDEI 900
+ AP+ I
Sbjct: 178 KWYAPECI 185
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS 792
IG G G V AR + G ++A+K+ + + E ++++ +H N+V++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL 852
+ +++E++ G+L D + S LN + + AL YLH + +IH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 853 KPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI----FVGELSLK 908
K ++LL D LSDFG +S + R + T +MAP+ I + E+ +
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQIS--KDVPKRKXLVGTPYWMAPEVISRSLYATEVDI- 224
Query: 909 RWVNDLLPVSLVEVVDKSLLSGEEKHFA 936
W L + ++E+VD GE +F+
Sbjct: 225 -WS---LGIMVIEMVD-----GEPPYFS 243
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 16/186 (8%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCASTLKSFEAECEVIKN------ 778
++F + ++G G FG V+ A + + AIK L + EC +++
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV--VLMDDDVECTMVEKRVLSLA 74
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
H L + + + V+EY++ G L H +C R A +
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYA--AEIILG 130
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L F HS I++ DLK N+LLD+D ++DFGM K D T T Y+AP
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIAP- 187
Query: 899 EIFVGE 904
EI +G+
Sbjct: 188 EILLGQ 193
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
DNF + IG G G V A + G +A+K + + E ++++ +H N+
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
V++ +S D +V+E++ G+L D + ++ +N + + + AL LH +
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---A 265
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+IH D+K ++LL D LSDFG +S E R + T +MAP+
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPE 317
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIIS 789
+G G FG V A + ++A+K Q + E E +K +RH +++K+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849
+ +V+EY + G L D + R I A+EY H I+H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH---RHKIVH 131
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
DLKP N+LLD+++ ++DFG++ +++ D + ++T + + Y AP+ I
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEVI 179
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 723 RATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKN 778
R + +G GGF Y D E+ P+ + E + K+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + ++V +DDF +VLE SL + LH A+ M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAP 897
LH + +IH DLK N+ L++DM + DFG+A + + E R +TL T Y+AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLCGTPNYIAP 211
Query: 898 D 898
+
Sbjct: 212 E 212
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 734 IGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS--- 789
+G GG G V+ A D +AIK ++K E ++I+ + H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 790 ---SCSNDDFKAL--------VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
S DD +L V EYM L + L L RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPL-LEEHARL-FMYQLLRGLKY 135
Query: 839 LHFGHSTPIIHCDLKPSNVLLD-EDMVAHLSDFGMAKLLSGE-DESTMRTQTLATIGYMA 896
+H S ++H DLKP+N+ ++ ED+V + DFG+A+++ ++ L T Y +
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 897 P 897
P
Sbjct: 193 P 193
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEA---EC 773
YF+ L +D + +G G +G V + + G E AIK+ +T + A E
Sbjct: 15 YFQGL--SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMI 830
V+K + H N++K+ + LV+E G L D + F ++ IM
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI----ILRQKFSEVDAAVIMK 128
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+ S YLH H+ I+H DLKP N+LL+ D + + DFG++ E M+ +
Sbjct: 129 QVLSGTTYLH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMK-E 182
Query: 888 TLATIGYMAPD 898
L T Y+AP+
Sbjct: 183 RLGTAYYIAPE 193
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA--ECEVIKNIRHRNLVKIISS 790
IG G FG V++AR + G ++A+K + A E ++++ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 791 CSNDDFKALVLEYMSNGSL----EDCLHSSNCAL-NIFCRLNIMIDIASALEYL----HF 841
C KA GS+ + C H L N+ + + +I ++ L ++
Sbjct: 86 CRT---KASPYN-RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS-EIKRVMQMLLNGLYY 140
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
H I+H D+K +NVL+ D V L+DFG+A+ S ++ R + P E+
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 901 FVGE 904
+GE
Sbjct: 201 LLGE 204
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 897 PDEI 900
P+ +
Sbjct: 203 PESL 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 137 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 897 PDEI 900
P+ +
Sbjct: 194 PESL 197
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 732 NIIGIGGFGSVYRARLEDGVEI--AIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS 789
N IG G +G V + ++ G I A K + F+ E E++K++ H N++++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 790 SCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ ++ LV+E + G L E +H + R IM D+ SA+ Y H +
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYC---HKLNVA 128
Query: 849 HCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
H DLKP N L D L DFG+A + MRT+ + T Y++P
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSP 177
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 732 NIIGIGGFGSVYRARLEDGVEI--AIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIIS 789
N IG G +G V + ++ G I A K + F+ E E++K++ H N++++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 790 SCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ ++ LV+E + G L E +H + R IM D+ SA+ Y H +
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYC---HKLNVA 145
Query: 849 HCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
H DLKP N L D L DFG+A + MRT+ + T Y++P
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSP 194
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK-SFEAECEVIKNIRHRN 783
D+F + +G G G V + + G+ +A K+ H + ++ E +V+
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCL-HSSNCALNIFCRLNIMIDIASALEYLHFG 842
+V + +D ++ +E+M GSL+ L + I +++I + L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV--LRGLAYLREK 133
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H D+KPSN+L++ L DFG +SG+ +M + T YMAP+ +
Sbjct: 134 HQ--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMAPERL 185
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 734 IGIGGFGSVYRARLEDGVEI-AIKV--FHPQCASTLKSFEAECEVIKNIRHRNLVKIISS 790
IG G +G+V++A+ + EI A+K S E ++K ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHC 850
+D LV E+ + L+ S N L+ + + + L+ L F HS ++H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 851 DLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGEL---SL 907
DLKP N+L++ + L++FG+A+ + + T+ Y PD +F +L S+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 908 KRW 910
W
Sbjct: 184 DMW 186
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E C N LN + + ID + LE +H
Sbjct: 124 YEITDQYIYMVME---------C---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + S ++ + + YM P+ I
Sbjct: 172 HQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFEA--ECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 174 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 897 PD 898
P+
Sbjct: 231 PE 232
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
DNF + IG G G V A + G +A+K + + E ++++ +H N+
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALEYLHF 841
V++ +S D +V+E++ G+L D + + R+N I + L+ L
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSV 140
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H+ +IH D+K ++LL D LSDFG +S E R + T +MAP+ I
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELI 197
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
DNF + IG G G V A + G +A+K + + E ++++ +H N+
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALEYLHF 841
V++ +S D +V+E++ G+L D + + R+N I + L+ L
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSV 142
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H+ +IH D+K ++LL D LSDFG +S E R + T +MAP+ I
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELI 199
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
DNF + IG G G V A + G +A+K + + E ++++ +H N+
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALEYLHF 841
V++ +S D +V+E++ G+L D + + R+N I + L+ L
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSV 131
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H+ +IH D+K ++LL D LSDFG +S E R + T +MAP+ I
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELI 188
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
DNF + IG G G V A + G +A+K + + E ++++ +H N+
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALEYLHF 841
V++ +S D +V+E++ G+L D + + R+N I + L+ L
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSV 135
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H+ +IH D+K ++LL D LSDFG +S E R + T +MAP+ I
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELI 192
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA--ECEVIKNIRHRNLVKIISS 790
IG G FG V++AR + G ++A+K + A E ++++ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 791 CSN-----DDFKA---LVLEYMSNGSLEDCLHSSNCAL-NIFCRLNIMIDIASALEYL-- 839
C + KA LV ++ C H L N+ + + +I ++ L
Sbjct: 86 CRTKASPYNRCKASIYLVFDF--------CEHDLAGLLSNVLVKFTLS-EIKRVMQMLLN 136
Query: 840 --HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMA 896
++ H I+H D+K +NVL+ D V L+DFG+A+ S ++ R +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 897 PDEIFVGE 904
P E+ +GE
Sbjct: 197 PPELLLGE 204
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 734 IGIGGFGSVYRARLE-DGVEIAIKV--FHPQCASTLKSFEAECEVIKNIRHRNLVK---- 786
IG G +G + R + DG + K + + + +E +++ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA---LNIFCRLNIMIDIASALEYLHF-- 841
II + + +V+EY G L + L+ L +M + AL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 842 --GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDE 899
GH+ ++H DLKP+NV LD L DFG+A++L+ +++ + T YM+P++
Sbjct: 132 DGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKAFVGTPYYMSPEQ 187
Query: 900 I 900
+
Sbjct: 188 M 188
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +G+V A G ++AIK + S L K E ++K++RH N++ ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 791 CSND----DFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+ D DF LV+ +M L + + I + L+ L + H+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGED-----RIQFLVYQMLKGLRYIHA 146
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
IIH DLKP N+ ++ED + DFG+A+ E + T Y AP+ I
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVI 197
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAEN-NIIGIGGFGSVYRA-RLEDGVEIA 754
RG+ +S + +PT R + + +N + +G G +GSV A + G +A
Sbjct: 17 RGSHMSQE-----RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVA 71
Query: 755 IKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDC 812
+K S + K E ++K+++H N++ ++ + A LE ++ L
Sbjct: 72 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT----PARSLEEFNDVYL--V 125
Query: 813 LHSSNCALNIFCRLNIMID------IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866
H LN + + D I L L + HS IIH DLKPSN+ ++ED
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+ DFG+A+ E +AT Y AP+
Sbjct: 186 ILDFGLARHTDDE-----MXGXVATRWYRAPE 212
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA--ECEVIKNIRHRNLVKIISS 790
IG G FG V++AR + G ++A+K + A E ++++ ++H N+V +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 791 CSNDDFKALVLEYMSNGSL----EDCLHSSNCAL-NIFCRLNIMIDIASALEYL----HF 841
C KA GS+ + C H L N+ + + +I ++ L ++
Sbjct: 85 CRT---KASPYN-RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS-EIKRVMQMLLNGLYY 139
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
H I+H D+K +NVL+ D V L+DFG+A+ S ++ R + P E+
Sbjct: 140 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 199
Query: 901 FVGE 904
+GE
Sbjct: 200 LLGE 203
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRA-RLEDG--VEIAIKVFHPQCASTLKSFEA---E 772
+L+ T+ F + ++ G FG+VY+ + +G V+I + + + A++ K+ + E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
V+ ++ + ++ +++ C + L+ + M G L D + + LN + I
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 893 GYMAPDEIF 901
+MA + I
Sbjct: 191 KWMALESIL 199
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 734 IGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEA--ECEVIKNIRHRNLVKIISS 790
IG G FG V++AR + G ++A+K + A E ++++ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 791 CSNDDFKALVLEYMSNGSL----EDCLHSSNCAL-NIFCRLNIMIDIASALEYL----HF 841
C KA GS+ + C H L N+ + + +I ++ L ++
Sbjct: 86 CRT---KASPYN-RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS-EIKRVMQMLLNGLYY 140
Query: 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTMRTQTLATIGYMAPDEI 900
H I+H D+K +NVL+ D V L+DFG+A+ S ++ R + P E+
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 901 FVGE 904
+GE
Sbjct: 201 LLGE 204
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 731 NNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-HRNLVKII 788
+ ++G G + V A L++G E A+K+ Q + E E + + ++N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+D LV E + GS+ + N ++ D+A+AL++LH + I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 849 HCDLKPSNVLLDE-DMVA--HLSDFGMAKLLSGEDEST-MRTQTLAT----IGYMAPD-- 898
H DLKP N+L + + V+ + DF + + + T + T L T YMAP+
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 899 EIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---HFAAK---------EQCLLSIF 946
E+F + + DL + +V + +LSG H A C +F
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYI---MLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 947 SLALECTMESPEK-----RIDAKDTITRLLKIRD 975
E E P+K +AKD I++LL +RD
Sbjct: 251 ESIQEGKYEFPDKDWAHISSEAKDLISKLL-VRD 283
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISS- 790
+G G +G V+R L G +A+K+F + +S+ E E+ + RH N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 791 --CSNDDFKA-LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH---FG-H 843
N + L+ Y +GSL D L ++ RL + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL--AVSAACGLAHLHVEIFGTQ 129
Query: 844 STPII-HCDLKPSNVLLDEDMVAHLSDFGMAKLLS-GEDESTM-RTQTLATIGYMAPD 898
P I H D K NVL+ ++ ++D G+A + S G D + + T YMAP+
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKII 788
+G GGF + D E+ P+ + E + +++ H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
++DF +VLE SL + LH AL + I +YLH +I
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 163
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
H DLK N+ L+ED+ + DFG+A + + E R + L T Y+AP+
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPE 211
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 707 LSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTL 766
+ + T+ F Y +LL F + ++ G Y ++ ++ + V + A TL
Sbjct: 3 MDPRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL 58
Query: 767 KSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
E V++N RH L + S D V+EY + G L H S + R
Sbjct: 59 ----TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 112
Query: 827 NIM-IDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTM 884
+I SAL+YLH +++ DLK N++LD+D ++DFG+ K G +D +TM
Sbjct: 113 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATM 168
Query: 885 RTQTLATIGYMAPD 898
+ T Y+AP+
Sbjct: 169 KX-FCGTPEYLAPE 181
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 712 TIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEA 771
T+ F Y +LL F + ++ G Y ++ ++ + V + A TL
Sbjct: 7 TMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL----T 58
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIM-I 830
E V++N RH L + S D V+EY + G L H S + R
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA 116
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-EDESTMRTQTL 889
+I SAL+YLH +++ DLK N++LD+D ++DFG+ K G +D +TM+
Sbjct: 117 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-FC 171
Query: 890 ATIGYMAPD 898
T Y+AP+
Sbjct: 172 GTPEYLAPE 180
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + FG+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKII 788
+G GGF + D E+ P+ + E + +++ H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
++DF +VLE SL + LH AL + I +YLH +I
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 161
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
H DLK N+ L+ED+ + DFG+A + + E R + L T Y+AP+
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPE 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 38/209 (18%)
Query: 728 FAENNI-----IGIGGFGSVYRARL-----EDGV-EIAIKVFHPQC-ASTLKSFEAECEV 775
F NN+ +G G FG V A ED V ++A+K+ A ++ +E ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 776 IKNI-RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA--------------- 819
+ ++ +H N+V ++ +C++ ++ EY G L + L A
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 820 -------LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872
L + L+ +A + +L S IH D+ NVLL VA + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 873 AKLLSGEDESTMRTQTLATIGYMAPDEIF 901
A+ + + ++ + +MAP+ IF
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIF 233
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 740 GSVYRARLEDGVEIAIKVFHPQCASTLKS--FEAECEVIKNIRHRNLVKIISSCSND--D 795
G +++ R + G +I +KV + ST KS F EC ++ H N++ ++ +C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 796 FKALVLEYMSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPII--HCDL 852
L+ +M GSL + LH +N ++ + +D+A + +LH P+I H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHA-L 139
Query: 853 KPSNVLLDEDMVAHLS 868
+V++DEDM A +S
Sbjct: 140 NSRSVMIDEDMTARIS 155
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + D G+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++G G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 182 PIKWMALESIL 192
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + D G+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCAL---------NIFCRLNIMIDIASAL 836
+++ S +++E M+ G L+ L S A+ ++ + + +IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 897 PDEI 900
P+ +
Sbjct: 209 PESL 212
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCAL---------NIFCRLNIMIDIASAL 836
+++ S +++E M+ G L+ L S A+ ++ + + +IA +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 897 PDEI 900
P+ +
Sbjct: 199 PESL 202
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEA---ECEVIKNIR 780
+D + +G G +G V + + G E AIK+ +T + A E V+K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALE 837
H N++K+ + LV+E G L D + F ++ IM + S
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI----ILRQKFSEVDAAVIMKQVLSGTT 118
Query: 838 YLHFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
YLH I+H DLKP N+LL+ D + + DFG++ E M+ + L T Y
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMK-ERLGTAYY 172
Query: 895 MAPD 898
+AP+
Sbjct: 173 IAPE 176
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 24/178 (13%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRN--LVKIIS 789
IG GG V++ E AIK + + A TL S+ E + ++ + ++++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID-------IASALEYLHFG 842
D + +V+E N LN + + ID + LE +H
Sbjct: 96 YEITDQYIYMVME------------CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
H I+H DLKP+N L+ + M+ L DFG+A + + ++ + T+ YM P+ I
Sbjct: 144 HQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 725 TDNFAENNIIGIGGFGSVYRARLEDGVE--IAIKVFHPQCASTLKSFEAECEVIKNIRHR 782
+D F + +G G VYR + + G + A+KV K E V+ + H
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHP 108
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
N++K+ +LVLE ++ G L D + + + + LE + +
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYL 164
Query: 843 HSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
H I+H DLKP N+L D ++DFG++K++ E + M+T T GY AP+
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYCAPE 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPE 192
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 718 YFELLRATDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKSFEAECEVI 776
YF+ + +D + IG+G + R +E A+KV + + E E++
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEIL 74
Query: 777 -KNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDI 832
+ +H N++ + + LV E M G L D + F ++ I
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI----LRQKFFSEREASFVLHTI 130
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVL-LDED---MVAHLSDFGMAKLLSGEDESTMRTQT 888
+EYLH S ++H DLKPSN+L +DE + DFG AK L E+ M
Sbjct: 131 GKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM--TP 185
Query: 889 LATIGYMAPD 898
T ++AP+
Sbjct: 186 CYTANFVAPE 195
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 86 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E +AT Y AP+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPE 188
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 26/266 (9%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCAS------TLKSFEA 771
F+ + D + +G G F V + R + G+E A K + + + + E
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E +++ + H N++ + N L+LE +S G L D L +L+ + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNV-LLDEDM-VAH--LSDFGMAKLLSGEDESTMRTQ 887
I + YL H+ I H DLKP N+ LLD+++ + H L DFG+A + ED +
Sbjct: 124 ILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-N 177
Query: 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIF 946
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANIT 231
Query: 947 SLALECTMESPEKRID-AKDTITRLL 971
S++ + E + AKD I +LL
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLL 257
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 733 IIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISS 790
++G G +G VY+ R ++ G AIKV + + E ++K HRN+ +
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 791 C------SNDDFKALVLEYMSNGSLEDCLHSSNCA------LNIFCRLNIMIDIASALEY 838
DD LV+E+ GS+ D + ++ + CR +I L +
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR-----EILRGLSH 144
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-LATIGYMAP 897
LH +IH D+K NVLL E+ L DFG++ L D + R T + T +MAP
Sbjct: 145 LH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAP 198
Query: 898 DEIFVGE 904
+ I E
Sbjct: 199 EVIACDE 205
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DFG+A+ E +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPE 192
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 728 FAEN-NII---GIGGFGSVYRARLEDGV---EIAIKVFHPQCAST--LKSFEAECEVIKN 778
FAE NI+ G G FG V + + D + E A+KV + A + E E++K
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALE 837
+ H N++K+ + +V E + G L ++ + + + R I+ + S +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGIT 135
Query: 838 YLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
Y+H H+ I+H DLKP N+LL ++D + DFG++ ++T + T Y
Sbjct: 136 YMH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYY 189
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTM 954
+AP E+ G K D+ ++ + LLSG + E +L +
Sbjct: 190 IAP-EVLRGTYDEK---CDVWSAGVILYI---LLSGTPPFYGKNEYDILKRVETG-KYAF 241
Query: 955 ESPEKRI---DAKDTITRLLKIRDTL 977
+ P+ R DAKD I ++L +L
Sbjct: 242 DLPQWRTISDDAKDLIRKMLTFHPSL 267
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 728 FAEN-NII---GIGGFGSVYRARLEDGV---EIAIKVFHPQCAST--LKSFEAECEVIKN 778
FAE NI+ G G FG V + + D + E A+KV + A + E E++K
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALE 837
+ H N++K+ + +V E + G L ++ + + + R I+ + S +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGIT 135
Query: 838 YLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
Y+H H+ I+H DLKP N+LL ++D + DFG++ ++T + T Y
Sbjct: 136 YMH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYY 189
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTM 954
+AP E+ G K D+ ++ + LLSG + E +L +
Sbjct: 190 IAP-EVLRGTYDEK---CDVWSAGVILYI---LLSGTPPFYGKNEYDILKRVETG-KYAF 241
Query: 955 ESPEKRI---DAKDTITRLLKIRDTL 977
+ P+ R DAKD I ++L +L
Sbjct: 242 DLPQWRTISDDAKDLIRKMLTFHPSL 267
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 724 ATDNFA---------ENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAEC 773
+TD+F+ + +++G G V L E A+K+ Q E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 774 EVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
E++ + HRN++++I +D LV E M GS+ +H N ++ D+
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDV 120
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVA--HLSDFGMAK--LLSGEDESTMRTQ 887
ASAL++LH + I H DLKP N+L + + V+ + DFG+ L+G+ +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 888 TLATIG---YMAPD--EIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------ 936
L G YMAP+ E F E S+ DL + ++ + LLSG
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI---LLSGYPPFVGRCGSDC 234
Query: 937 ------AKEQCLLSIFSLALECTMESPEK-----RIDAKDTITRLLKIRD 975
A C +F E E P+K AKD I++LL +RD
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLL-VRD 283
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G+ +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + D G+A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 26/266 (9%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCAS------TLKSFEA 771
F+ + D + +G G F V + R + G+E A K + + + + E
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E +++ + H N++ + N L+LE +S G L D L +L+ + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNV-LLDEDM-VAH--LSDFGMAKLLSGEDESTMRTQ 887
I + YL H+ I H DLKP N+ LLD+++ + H L DFG+A + ED +
Sbjct: 124 ILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-N 177
Query: 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIF 946
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANIT 231
Query: 947 SLALECTMESPEKRID-AKDTITRLL 971
S++ + E + AKD I +LL
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLL 257
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 722 LRATDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI 779
LR + + IG G FG +Y A + G E+AIK+ +C T E + K +
Sbjct: 5 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL---ECVKTKHPQLHIESKFYKMM 61
Query: 780 RHRNLVKIISSCSND-DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + I C + D+ +V+E + SLED + + ++ L + + S +EY
Sbjct: 62 QGGVGIPSIKWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 839 LHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAK 874
+H S IH D+KP N L+ + + ++ DFG+AK
Sbjct: 121 IH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHL 867
SLED H C L+I I IA A+E+LH S ++H DLKPSN+ D V +
Sbjct: 157 SLEDREHG-------VC-LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV 205
Query: 868 SDFGMAKLL-SGEDESTMRTQTLA---------TIGYMAPDEI 900
DFG+ + E+E T+ T A T YM+P++I
Sbjct: 206 GDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQI 248
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 26/266 (9%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCAS------TLKSFEA 771
F+ + D + +G G F V + R + G+E A K + + + + E
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E +++ + H N++ + N L+LE +S G L D L +L+ + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNV-LLDEDM-VAH--LSDFGMAKLLSGEDESTMRTQ 887
I + YL H+ I H DLKP N+ LLD+++ + H L DFG+A + ED +
Sbjct: 124 ILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-N 177
Query: 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIF 946
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANIT 231
Query: 947 SLALECTMESPEKRID-AKDTITRLL 971
S++ + E + AKD I +LL
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLL 257
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCAS------TLKSFEA 771
F+ + D + +G G F V + R + G+E A K + + + + E
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E +++ + H N++ + N L+LE +S G L D L +L+ + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNV-LLDEDM-VAH--LSDFGMAKLLSGEDESTMRTQ 887
I + YL H+ I H DLKP N+ LLD+++ + H L DFG+A + ED +
Sbjct: 124 ILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-N 177
Query: 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIF 946
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANIT 231
Query: 947 SLALECTMESPEKRID-AKDTITRLL 971
+++ + E + + AKD I +LL
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLL 257
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 728 FAEN-NII---GIGGFGSVYRARLEDGV---EIAIKVFHPQCAS--TLKSFEAECEVIKN 778
FAE NI+ G G FG V + + D + E A+KV + A + E E++K
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSL-EDCLHSSNCALNIFCRLNIMIDIASALE 837
+ H N++K+ + +V E + G L ++ + + + R I+ + S +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGIT 135
Query: 838 YLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
Y+H H+ I+H DLKP N+LL ++D + DFG++ ++T + T Y
Sbjct: 136 YMH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYY 189
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTM 954
+AP E+ G K D+ ++ + LLSG + E +L +
Sbjct: 190 IAP-EVLRGTYDEK---CDVWSAGVILYI---LLSGTPPFYGKNEYDILKRVETG-KYAF 241
Query: 955 ESPEKRI---DAKDTITRLLKIRDTL 977
+ P+ R DAKD I ++L +L
Sbjct: 242 DLPQWRTISDDAKDLIRKMLTFHPSL 267
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 362 SSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIA-FCNISGNIPKAIGNLSNLI 420
+S C+ L L L N L ++ L+L LE+L+++ + P L L
Sbjct: 50 ASFRACRNLTILWLHSNVLARIDAAAFTGLAL-LEQLDLSDNAQLRSVDPATFHGLGRLH 108
Query: 421 VLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGS 480
L L L P F GL LQ L L N L D L L L L+GN+IS
Sbjct: 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168
Query: 481 ISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVV 540
L SL L L NR V P F +L +++ + +N L + A+ L+A+
Sbjct: 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228
Query: 541 GIDLSRN 547
+ L+ N
Sbjct: 229 YLRLNDN 235
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 418 NLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSI-PDEICLLSRLNELDLNGNK 476
NL +L L N L+ F GL L+ LDL+ N S+ P L RL+ L L+
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNL 536
+ L +LQYL L N + TF +L ++ + N + A L
Sbjct: 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176
Query: 537 KAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNN 595
++ + L +N ++ P L L + L N L E+ + +L+ L L++N
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 472 LNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNL----LDG 527
L+GN+IS ++ +L L L SN + + F L + D+S N +D
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 528 PISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSL 587
+G L + L R L P GL +LQ + L N L+ ++F ++ +L
Sbjct: 99 ATFHGLGRLHT---LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 155
Query: 588 ESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
L L N+IS +F L L L L N++
Sbjct: 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 106 HNKLSSNIPSSIF-TMSTLKVLYLMDNQLSGSLSSFTFNTSSILD-IRLSKNKLSGKLPE 163
H S++P++ F L +L+L N L+ + + F ++L+ + LS N +
Sbjct: 40 HGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 164 NICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIP----KEIGNLTV 219
+ L L L L P LQ L+L N L A+P +++GNLT
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLT- 156
Query: 220 LQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS 279
+ L N++ + L +LD L L N + V P ++ L ++L+ N+LS
Sbjct: 157 --HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
Query: 280 GSLPSRIDLALPNLEFLNLGINSF 303
+LP+ L L++L L N +
Sbjct: 215 -ALPTEALAPLRALQYLRLNDNPW 237
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 492 QYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRN-NLS 550
Q + L NR + V ++F +++ + SN+L + A L + +DLS N L
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 551 GNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSY 610
P T GL L + L L+ P F + +L+ L L +N + +F L
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 154
Query: 611 LKELNLSFNKL 621
L L L N++
Sbjct: 155 LTHLFLHGNRI 165
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 95/243 (39%), Gaps = 32/243 (13%)
Query: 209 AIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTL 268
A+P +G QRI L N++ +NL +L L N L + A ++ L
Sbjct: 25 AVP--VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 269 KEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFS 328
+++ L +N+ S+ L L L+L + L E+G F
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHL----------------DRCGLQELGPGLFR 126
Query: 329 GFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSI 388
G + L+ L L D N + P+ F L N L +L L GN + +
Sbjct: 127 G-----LAALQYLYLQD----NALQALPDDTF-RDLGN---LTHLFLHGNRISSVPERAF 173
Query: 389 GNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDL 448
L SL+RL + ++ P A +L L+ L L NNLS L+ LQ L L
Sbjct: 174 RGLH-SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 232
Query: 449 AFN 451
N
Sbjct: 233 NDN 235
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 362 SSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIA-FCNISGNIPKAIGNLSNLI 420
+S C+ L L L N L ++ L+L LE+L+++ + P L L
Sbjct: 49 ASFRACRNLTILWLHSNVLARIDAAAFTGLAL-LEQLDLSDNAQLRSVDPATFHGLGRLH 107
Query: 421 VLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGS 480
L L L P F GL LQ L L N L D L L L L+GN+IS
Sbjct: 108 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 167
Query: 481 ISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVV 540
L SL L L NR V P F +L +++ + +N L + A+ L+A+
Sbjct: 168 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 227
Query: 541 GIDLSRN 547
+ L+ N
Sbjct: 228 YLRLNDN 234
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 418 NLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSI-PDEICLLSRLNELDLNGNK 476
NL +L L N L+ F GL L+ LDL+ N S+ P L RL+ L L+
Sbjct: 56 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 115
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNL 536
+ L +LQYL L N + TF +L ++ + N + A L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 175
Query: 537 KAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNN 595
++ + L +N ++ P L L + L N L E+ + +L+ L L++N
Sbjct: 176 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 472 LNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNL----LDG 527
L+GN+IS ++ +L L L SN + + F L + D+S N +D
Sbjct: 38 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 97
Query: 528 PISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSL 587
+G L + L R L P GL +LQ + L N L+ ++F ++ +L
Sbjct: 98 ATFHGLGRLHT---LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 154
Query: 588 ESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
L L N+IS +F L L L L N++
Sbjct: 155 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 188
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 106 HNKLSSNIPSSIF-TMSTLKVLYLMDNQLSGSLSSFTFNTSSILD-IRLSKNKLSGKLPE 163
H S++P++ F L +L+L N L+ + + F ++L+ + LS N +
Sbjct: 39 HGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLRSVDP 97
Query: 164 NICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIP----KEIGNLTV 219
+ L L L L P LQ L+L N L A+P +++GNLT
Sbjct: 98 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLT- 155
Query: 220 LQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS 279
+ L N++ + L +LD L L N + V P ++ L ++L+ N+LS
Sbjct: 156 --HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 213
Query: 280 GSLPSRIDLALPNLEFLNLGINSF 303
+LP+ L L++L L N +
Sbjct: 214 -ALPTEALAPLRALQYLRLNDNPW 236
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 492 QYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRN-NLS 550
Q + L NR + V ++F +++ + SN+L + A L + +DLS N L
Sbjct: 34 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 93
Query: 551 GNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSY 610
P T GL L + L L+ P F + +L+ L L +N + +F L
Sbjct: 94 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 153
Query: 611 LKELNLSFNKL 621
L L L N++
Sbjct: 154 LTHLFLHGNRI 164
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 95/243 (39%), Gaps = 32/243 (13%)
Query: 209 AIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTL 268
A+P +G QRI L N++ +NL +L L N L + A ++ L
Sbjct: 24 AVP--VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 81
Query: 269 KEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFS 328
+++ L +N+ S+ L L L+L + L E+G F
Sbjct: 82 EQLDLSDNAQLRSVDPATFHGLGRLHTLHL----------------DRCGLQELGPGLFR 125
Query: 329 GFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSI 388
G + L+ L L D N + P+ F L N L +L L GN + +
Sbjct: 126 G-----LAALQYLYLQD----NALQALPDDTF-RDLGN---LTHLFLHGNRISSVPERAF 172
Query: 389 GNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDL 448
L SL+RL + ++ P A +L L+ L L NNLS L+ LQ L L
Sbjct: 173 RGLH-SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 231
Query: 449 AFN 451
N
Sbjct: 232 NDN 234
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 704 DIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQ- 761
D + ++P + R L R D+F +IG G F V ++ + G A+K+ +
Sbjct: 41 DFLQWAEPIVVRLKEVRLQR--DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD 98
Query: 762 --CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA 819
+ F E +V+ N R + ++ + ++++ LV+EY G L L
Sbjct: 99 MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER 158
Query: 820 LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879
+ + +I A++ +H +H D+KP N+LLD L+DFG L
Sbjct: 159 IPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA- 214
Query: 880 DESTMRT-QTLATIGYMAPD 898
+ T+R+ + T Y++P+
Sbjct: 215 -DGTVRSLVAVGTPDYLSPE 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 143 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 897 PDEI 900
P+ +
Sbjct: 200 PESL 203
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 139 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 897 PDEI 900
P+ +
Sbjct: 196 PESL 199
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 897 PDEI 900
P+ +
Sbjct: 202 PESL 205
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 897 PDEI 900
P+ +
Sbjct: 202 PESL 205
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 897 PDEI 900
P+ +
Sbjct: 209 PESL 212
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N ++ ED + DFGM + + D + L + +M+
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 897 PDEI 900
P+ +
Sbjct: 203 PESL 206
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCAS------TLKSFEA 771
F+ + D + +G G F V + R + G+E A K + + + + E
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E +++ + H N++ + N L+LE +S G L D L +L+ + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNV-LLDEDM-VAH--LSDFGMAKLLSGEDESTMRTQ 887
I + YL H+ I H DLKP N+ LLD+++ + H L DFG+A + ED +
Sbjct: 124 ILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-N 177
Query: 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIF 946
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANIT 231
Query: 947 SLALECTMESPEKRID-AKDTITRLL 971
+++ + E + + AKD I +LL
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLL 257
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI 779
LR + + IG G FG +Y + G E+AIK+ +C T E ++ K +
Sbjct: 3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQLHIESKIYKMM 59
Query: 780 RHRNLVKIISSCSND-DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + I C + D+ +V+E + SLED + + ++ L + + S +EY
Sbjct: 60 QGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 839 LHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAK 874
+H S IH D+KP N L+ + + ++ DFG+AK
Sbjct: 119 IH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI 779
LR + + IG G FG +Y + G E+AIK+ +C T E ++ K +
Sbjct: 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQLHIESKIYKMM 61
Query: 780 RHRNLVKIISSCSND-DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + I C + D+ +V+E + SLED + + ++ L + + S +EY
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 839 LHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAK 874
+H S IH D+KP N L+ + + ++ DFG+AK
Sbjct: 121 IH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 723 RATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKN 778
R + +G GGF Y D E+ P+ + E + K+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + ++V +DDF +VLE SL + LH A+ M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
LH + +IH DLK N+ L++DM + DFG+A + + E + T Y+AP+
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPE 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 723 RATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKN 778
R + +G GGF Y D E+ P+ + E + K+
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + ++V +DDF +VLE SL + LH A+ M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
LH + +IH DLK N+ L++DM + DFG+A + + E + T Y+AP+
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPE 196
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 720 ELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV---FHPQCASTLKSFEAECEV 775
+L +++ +IG G FG V R + ++ A+K+ F S F E ++
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+ +V++ + +D + +V+EYM G L + + + + + R ++ A
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP-EKWARF-YTAEVVLA 180
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-LATIGY 894
L+ +H S IH D+KP N+LLD+ L+DFG ++ E +R T + T Y
Sbjct: 181 LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK--EGMVRCDTAVGTPDY 235
Query: 895 MAPD 898
++P+
Sbjct: 236 ISPE 239
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRAR-LEDG--VEIAIKVFHPQCASTLKSFEA-- 771
+ +L+ T+ F + ++ G FG+VY+ + +G V+I + + + A++ K+ +
Sbjct: 7 ALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 772 -ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
E V+ ++ + ++ +++ C + L+ + M G L D + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
IA + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 891 TIGYMAPDEIF 901
I +MA + I
Sbjct: 182 PIKWMALESIL 192
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 720 ELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV---FHPQCASTLKSFEAECEV 775
+L +++ +IG G FG V R + ++ A+K+ F S F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+ +V++ + +D + +V+EYM G L + + + + + R ++ A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP-EKWARF-YTAEVVLA 185
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-LATIGY 894
L+ +H S IH D+KP N+LLD+ L+DFG ++ E +R T + T Y
Sbjct: 186 LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK--EGMVRCDTAVGTPDY 240
Query: 895 MAPD 898
++P+
Sbjct: 241 ISPE 244
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLVKI 787
+G G FGSV YR R + +++AIKV Q + E E +++ + + +V++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-IDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
I C + LV+E G L L + + ++ ++ ++YL
Sbjct: 402 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNF 457
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE-STMRTQTLATIGYMAPDEI 900
+H +L NVLL A +SDFG++K L +D T R+ + + AP+ I
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 720 ELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKV---FHPQCASTLKSFEAECEV 775
+L +++ +IG G FG V R + ++ A+K+ F S F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+ +V++ + +D + +V+EYM G L + + + + + R ++ A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP-EKWARF-YTAEVVLA 185
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT-LATIGY 894
L+ +H S IH D+KP N+LLD+ L+DFG ++ E +R T + T Y
Sbjct: 186 LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK--EGMVRCDTAVGTPDY 240
Query: 895 MAPD 898
++P+
Sbjct: 241 ISPE 244
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTL--KSFEAECEVIKNIRHRNLVKIISS 790
+G G +GSV A + G +A+K S + K E ++K+++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 791 CSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID------IASALEYLHFGHS 844
+ A LE ++ L H LN + + D I L L + HS
Sbjct: 90 FT----PARSLEEFNDVYL--VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
IIH DLKPSN+ ++ED + DF +A+ E T +AT Y AP+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPE 192
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 723 RATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKN 778
R + +G GGF Y D E+ P+ + E + K+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
+ + ++V +DDF +VLE SL + LH A+ M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
LH + +IH DLK N+ L++DM + DFG+A + + E + T Y+AP+
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPE 212
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 446 LDLAFNKLAGSIP----DEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRF 501
L+L NKL S+P D++ L++L+ L NG G S TSL+YL+L N
Sbjct: 33 LELESNKLQ-SLPHGVFDKLTQLTKLS-LSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG- 89
Query: 502 TFVIPSTFWNLKDILSFDIS-SNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGL 560
+ S F L+ + D SNL +L+ ++ +D+S + GL
Sbjct: 90 VITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149
Query: 561 KSLQNISLAYNRL-EGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFN 619
SL+ + +A N E +P+ F + +L LDLS ++ P +F LS L+ LN+S N
Sbjct: 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 247 LQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS-GSLPSRIDLALPNLEFLNLGINSFSG 305
L+L N L + ++ L ++ L +N LS S+ D +L++L+L SF+G
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL---SFNG 89
Query: 306 TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFN-------NLTSSTPEL 358
I T +S + LE + + NL+ + F +F + +++ + +
Sbjct: 90 VI----TMSSNFLGLEQLEH-----LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 140
Query: 359 GFLSSLANCKKLRYLGLGGNPL-DGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLS 417
F L L + GN + FLP L +L L+++ C + P A +LS
Sbjct: 141 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLDLSQCQLEQLSPTAFNSLS 199
Query: 418 NLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEI 461
+L VL++ NN + L LQ LD + N + S E+
Sbjct: 200 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 122/306 (39%), Gaps = 26/306 (8%)
Query: 283 PSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLK 342
PSR + + + G+ S IPSS T LE+ SN L L
Sbjct: 2 PSRCSCSGTEIRCNSKGLTSVPTGIPSSATR------LELESNKLQSLPHGVFDKLTQLT 55
Query: 343 LFDIFFNNLT----SSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSL-SLER 397
+ N L+ S + G S L+YL L N G + S L L LE
Sbjct: 56 KLSLSSNGLSFKGCCSQSDFGTTS-------LKYLDLSFN---GVITMSSNFLGLEQLEH 105
Query: 398 LNIAFCNISGNIPKAIG-NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGS 456
L+ N+ ++ +L NLI L + + + F GL L+ L +A N +
Sbjct: 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165
Query: 457 -IPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDI 515
+PD L L LDL+ ++ + +L+SLQ LN+ N F + + L +
Sbjct: 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225
Query: 516 LSFDISSNLLDGPISLAIGNLKAVVG-IDLSRNNLSGNIP--TTLEGLKSLQNISLAYNR 572
D S N + + + + + ++L++N+ + + L+ +K + + + R
Sbjct: 226 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVER 285
Query: 573 LEGPIP 578
+E P
Sbjct: 286 MECATP 291
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 145 SSILDIRLSKNKLSGKLPENICNHLRYLKHLFLREN--MFYGKIPSSLSKCKQLQELHLG 202
SS + L NKL LP + + L L L L N F G S L+ L L
Sbjct: 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86
Query: 203 YNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGY-----LQNLDVLQLGFNNLTGV 257
+N G I N L+++ ++ + H + Q + L+NL L + + T V
Sbjct: 87 FN---GVITMS-SNFLGLEQLEHLDFQ-HSNLKQMSEFSVFLSLRNLIYLDISHTH-TRV 140
Query: 258 VPATIFN-MSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASK 316
IFN +S+L+ + + NS + I L NL FL+L P++ + S
Sbjct: 141 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 200
Query: 317 LILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNN-LTSSTPELG-FLSSLA 365
L +L M N+F L +L++ D N+ +TS EL F SSLA
Sbjct: 201 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 251
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 437 FGGLQKLQGLDLAFNKLAGSIPDEICL-LSRLNELDLNGNKISGSISSCLGNLTSLQYLN 495
F GL++L+ LD + L + L L L LD++ + + L+SL+ L
Sbjct: 97 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156
Query: 496 LGSNRFTF-VIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIP 554
+ N F +P F L+++ D+S L+ A +L ++ +++S NN
Sbjct: 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216
Query: 555 TTLEGLKSLQNISLAYNRLEGPIPESFGNM-TSLESLDLSNNKIS 598
+ L SLQ + + N + + + +SL L+L+ N +
Sbjct: 217 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H DL N ++ D + DFGM + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 898 DEI 900
+ +
Sbjct: 199 ESL 201
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H DL N ++ D + DFGM + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 898 DEI 900
+ +
Sbjct: 202 ESL 204
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H DL N ++ D + DFGM + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 898 DEI 900
+ +
Sbjct: 202 ESL 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 10/176 (5%)
Query: 732 NIIGIGGFGSVYRA-RLEDG----VEIAIKVFHPQCASTL-KSFEAECEVIKNIRHRNLV 785
++G G FG+VY+ + DG + +AIKV + K E V+ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHST 845
+++ C + LV + M G L D + + L LN + IA + YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF 901
++H DL NVL+ ++DFG+A+LL ++ I +MA + I
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 16/179 (8%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQ-----CA---STLKSFEAECEVIKNIRHRNL 784
+G G FG V+ A E E+ +K + C L E ++ + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS 844
+K++ N F LV+E +G + L+ I + SA+ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD- 150
Query: 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVG 903
IIH D+K N+++ ED L DFG A L + + TI Y AP E+ +G
Sbjct: 151 --IIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTIEYCAP-EVLMG 203
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 121/290 (41%), Gaps = 46/290 (15%)
Query: 724 ATDNFA---------ENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAEC 773
+TD+F+ + +++G G V L E A+K+ Q E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 774 EVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
E++ + HRN++++I +D LV E M GS+ +H N ++ D+
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDV 120
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLS----DFGMAKLLSGEDESTMRTQ 887
ASAL++LH + I H DLKP N+L + + V+ + D G L+G+ +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 888 TLATIG---YMAPD--EIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------ 936
L G YMAP+ E F E S+ DL + ++ + LLSG
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI---LLSGYPPFVGRCGSDC 234
Query: 937 ------AKEQCLLSIFSLALECTMESPEK-----RIDAKDTITRLLKIRD 975
A C +F E E P+K AKD I++LL +RD
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLL-VRD 283
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRAR-LEDGVE-IAIKVFHPQCA------STLKSFEAE 772
L RA + IG G +G V++AR L++G +A+K Q ST++ A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AV 64
Query: 773 CEVIKNIRHRNLVKIISSC--SNDDFKA---LVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
++ H N+V++ C S D + LV E++ + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 828 IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+M + L++LH S ++H DLKP N+L+ L+DFG+A++ S + T
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTS 178
Query: 888 TLATIGYMAPD 898
+ T+ Y AP+
Sbjct: 179 VVVTLWYRAPE 189
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRAR-LEDGVE-IAIKVFHPQCA------STLKSFEAE 772
L RA + IG G +G V++AR L++G +A+K Q ST++ A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AV 64
Query: 773 CEVIKNIRHRNLVKIISSC--SNDDFKA---LVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
++ H N+V++ C S D + LV E++ + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 828 IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+M + L++LH S ++H DLKP N+L+ L+DFG+A++ S + T
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTS 178
Query: 888 TLATIGYMAPD 898
+ T+ Y AP+
Sbjct: 179 VVVTLWYRAPE 189
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRAR-LEDGVE-IAIKVFHPQCA------STLKSFEAE 772
L RA + IG G +G V++AR L++G +A+K Q ST++ A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AV 64
Query: 773 CEVIKNIRHRNLVKIISSC--SNDDFKA---LVLEYMSNGSLEDCLHSSNCALNIFCRLN 827
++ H N+V++ C S D + LV E++ + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 828 IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+M + L++LH S ++H DLKP N+L+ L+DFG+A++ S + T
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTS 178
Query: 888 TLATIGYMAPD 898
+ T+ Y AP+
Sbjct: 179 VVVTLWYRAPE 189
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIK-VFHPQCA--------STLKSFEAEC 773
AT + IG+G +G+VY+AR G +A+K V P ST++ A
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV-ALL 65
Query: 774 EVIKNIRHRNLVKIISSC----SNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNI 828
++ H N+V+++ C ++ + K LV E++ + L ++
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 829 MIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888
M L++L H+ I+H DLKP N+L+ L+DFG+A++ S + T
Sbjct: 126 MRQFLRGLDFL---HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPV 179
Query: 889 LATIGYMAPD 898
+ T+ Y AP+
Sbjct: 180 VVTLWYRAPE 189
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 235/552 (42%), Gaps = 61/552 (11%)
Query: 87 GTIPP--EIANLSSLKSLDLSHNKLSSNIPSSI----FTMSTLKVLYLMDNQLSGSLSSF 140
G++ P E+ + + +D +K+ +IPSS + + LK+L S+
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKIL-----------KSY 50
Query: 141 TF-NTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQEL 199
+F N S + + LS+ ++ + + + L +L +L L N P S S L+ L
Sbjct: 51 SFSNFSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109
Query: 200 HLGYNNLSGAIPKEIGNLTVLQRISLINNKLHG-EIPQEIGYLQNLDVLQLGFNNLTGVV 258
L+ IG L L+++++ +N +H ++P L NL + L +N + +
Sbjct: 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI- 168
Query: 259 PATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFS--GTIPSSITNASK 316
T+ ++ L+E N SL SL + ID + + F + ++ + G SS N K
Sbjct: 169 --TVNDLQFLRENPQVNLSLDMSL-NPIDF-IQDQAFQGIKLHELTLRGNFNSS--NIMK 222
Query: 317 LILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPEL--GFLSSLANCKKLRYLG 374
L + I + RNL++F+ P + G + +L Y
Sbjct: 223 TCLQNLAGLHVHRLILGEFKDERNLEIFE----------PSIMEGLCDVTIDEFRLTYTN 272
Query: 375 LGGNPLDGFLPSSIGNLS-LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSI 433
+ + F + N+S +SL ++I + ++PK S I+ + +
Sbjct: 273 DFSDDIVKF--HCLANVSAMSLAGVSIKYLE---DVPKHFKWQSLSIIRCQLKQFPTLDL 327
Query: 434 PVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNL--TSL 491
P L+ L L NK GSI + L L+ LDL+ N +S S +L SL
Sbjct: 328 PF-------LKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSL 378
Query: 492 QYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISL-AIGNLKAVVGIDLSRNNLS 550
++L+L N ++ + F L+++ D + L A +L+ ++ +D+S N
Sbjct: 379 RHLDLSFNG-AIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437
Query: 551 GNIPTTLEGLKSLQNISLAYNRL-EGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLS 609
+ GL SL + +A N + + F N T+L LDLS ++ F+ L
Sbjct: 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH 497
Query: 610 YLKELNLSFNKL 621
L+ LN+S N L
Sbjct: 498 RLQLLNMSHNNL 509
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 15/271 (5%)
Query: 373 LGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGS 432
+ L NPL S N S L+ L+++ C I KA L +L L L GN +
Sbjct: 37 IDLSFNPLKILKSYSFSNFS-ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF 95
Query: 433 IPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKI-SGSISSCLGNLTSL 491
P +F GL L+ L KLA I L L +L++ N I S + + NLT+L
Sbjct: 96 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNL 155
Query: 492 QYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSG 551
+++L N + + L++ ++S ++ PI +A GI L L G
Sbjct: 156 VHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQD--QAFQGIKLHELTLRG 213
Query: 552 NIPTTLEGLKSLQNIS-LAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSY 610
N ++ LQN++ L +RL I F + +LE + S + + + +L+Y
Sbjct: 214 NFNSSNIMKTCLQNLAGLHVHRL---ILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270
Query: 611 LKELNLSFNKLKGEIPRGGPFANFTAESFMG 641
N +I + AN +A S G
Sbjct: 271 T-------NDFSDDIVKFHCLANVSAMSLAG 294
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 479 GSISSCLGNLTSLQY--LNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNL 536
GS++ C+ + ++ Y ++ ++ IPS+ N+ D+S N L S + N
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNI------DLSFNPLKILKSYSFSNF 55
Query: 537 KAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNK 596
+ +DLSR + GL L N+ L N ++ P SF +TSLE+L K
Sbjct: 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115
Query: 597 ISG--SIPVSFEKLSYLKELNLSFNKLKG-EIPRGGPFANFT 635
++ S P+ +L LK+LN++ N + ++P F+N T
Sbjct: 116 LASLESFPIG--QLITLKKLNVAHNFIHSCKLP--AYFSNLT 153
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 562 SLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
S +NI L++N L+ SF N + L+ LDLS +I ++ L +L L L+
Sbjct: 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILT---- 88
Query: 622 KGEIPRGGPFANFTAESFMGNELLCGLPNL 651
G P +F+ SF G L L NL
Sbjct: 89 ------GNPIQSFSPGSFSG---LTSLENL 109
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 27/193 (13%)
Query: 288 LALPNLEFLNLGIN--SFSGTIPSSITNASKLILLEMGSNSFSGFI--PSAIGNLRNLKL 343
+ALP+L +L+L N SFSG S + L L++ SF+G I + L L+
Sbjct: 347 VALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL---SFNGAIIMSANFMGLEELQH 403
Query: 344 FDIFFNNLTSSTPELGFLS---------SLANCK-----------KLRYLGLGGNPLDGF 383
D + L T FLS S N K L L + GN
Sbjct: 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN 463
Query: 384 LPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKL 443
S++ + +L L+++ C + L L +L++ NNL + L L
Sbjct: 464 TLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSL 523
Query: 444 QGLDLAFNKLAGS 456
LD +FN++ S
Sbjct: 524 STLDCSFNRIETS 536
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 19/155 (12%)
Query: 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCA----------STLKSFEAECEVIKNIR 780
+ +IG G FG VY D + I QCA +++F E +++ +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRI-----QCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 781 HRNLVKIIS-SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
H N++ +I + ++L YM +G L + S + ++ + +A +EYL
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874
+H DL N +LDE ++DFG+A+
Sbjct: 141 A---EQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 229/539 (42%), Gaps = 59/539 (10%)
Query: 98 SLKSLDLSHNKLSSNIPSSI----FTMSTLKVLYLMDNQLSGSLSSFTF-NTSSILDIRL 152
+ + +D +K+ +IPSS + + LK+L S++F N S + + L
Sbjct: 10 TYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKIL-----------KSYSFSNFSELQWLDL 58
Query: 153 SKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPK 212
S+ ++ + + + L +L +L L N P S S L+ L L+
Sbjct: 59 SRCEIE-TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESF 117
Query: 213 EIGNLTVLQRISLINNKLHG-EIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEI 271
IG L L+++++ +N +H ++P L NL + L +N + + T+ ++ L+E
Sbjct: 118 PIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI---TVNDLQFLREN 174
Query: 272 FLYNNSLSGSLPSRIDLALPNLEFLNLGINSFS--GTIPSSITNASKLILLEMGSNSFSG 329
N SL SL + ID + + F + ++ + G SS N K L +
Sbjct: 175 PQVNLSLDMSL-NPIDF-IQDQAFQGIKLHELTLRGNFNSS--NIMKTCLQNLAGLHVHR 230
Query: 330 FIPSAIGNLRNLKLFDIFFNNLTSSTPEL--GFLSSLANCKKLRYLGLGGNPLDGFLPSS 387
I + RNL++F+ P + G + +L Y + + F
Sbjct: 231 LILGEFKDERNLEIFE----------PSIMEGLCDVTIDEFRLTYTNDFSDDIVKF--HC 278
Query: 388 IGNLS-LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGL 446
+ N+S +SL ++I + ++PK S I+ + +P L+ L
Sbjct: 279 LANVSAMSLAGVSIKYLE---DVPKHFKWQSLSIIRCQLKQFPTLDLPF-------LKSL 328
Query: 447 DLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNL--TSLQYLNLGSNRFTFV 504
L NK GSI + L L+ LDL+ N +S S +L SL++L+L N +
Sbjct: 329 TLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNG-AII 385
Query: 505 IPSTFWNLKDILSFDISSNLLDGPISL-AIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSL 563
+ + F L+++ D + L A +L+ ++ +D+S N + GL SL
Sbjct: 386 MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL 445
Query: 564 QNISLAYNRL-EGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
+ +A N + + F N T+L LDLS ++ F+ L L+ LN+S N L
Sbjct: 446 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 504
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 15/273 (5%)
Query: 371 RYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLS 430
+ + L NPL S N S L+ L+++ C I KA L +L L L GN +
Sbjct: 30 KNIDLSFNPLKILKSYSFSNFS-ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 88
Query: 431 GSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKI-SGSISSCLGNLT 489
P +F GL L+ L KLA I L L +L++ N I S + + NLT
Sbjct: 89 SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLT 148
Query: 490 SLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNL 549
+L +++L N + + L++ ++S ++ PI +A GI L L
Sbjct: 149 NLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQD--QAFQGIKLHELTL 206
Query: 550 SGNIPTTLEGLKSLQNIS-LAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKL 608
GN ++ LQN++ L +RL I F + +LE + S + + + +L
Sbjct: 207 RGNFNSSNIMKTCLQNLAGLHVHRL---ILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 263
Query: 609 SYLKELNLSFNKLKGEIPRGGPFANFTAESFMG 641
+Y N +I + AN +A S G
Sbjct: 264 TYT-------NDFSDDIVKFHCLANVSAMSLAG 289
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 562 SLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
S +NI L++N L+ SF N + L+ LDLS +I ++ L +L L L+
Sbjct: 28 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILT---- 83
Query: 622 KGEIPRGGPFANFTAESFMGNELLCGLPNL 651
G P +F+ SF G L L NL
Sbjct: 84 ------GNPIQSFSPGSFSG---LTSLENL 104
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 27/193 (13%)
Query: 288 LALPNLEFLNLGIN--SFSGTIPSSITNASKLILLEMGSNSFSGFI--PSAIGNLRNLKL 343
+ALP+L +L+L N SFSG S + L L++ SF+G I + L L+
Sbjct: 342 VALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL---SFNGAIIMSANFMGLEELQH 398
Query: 344 FDIFFNNLTSSTPELGFLS---------SLANCK-----------KLRYLGLGGNPLDGF 383
D + L T FLS S N K L L + GN
Sbjct: 399 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN 458
Query: 384 LPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKL 443
S++ + +L L+++ C + L L +L++ NNL + L L
Sbjct: 459 TLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSL 518
Query: 444 QGLDLAFNKLAGS 456
LD +FN++ S
Sbjct: 519 STLDCSFNRIETS 531
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 236 QEIGYLQNLDVLQLGFNNLTGVVP--------------------ATIFNMSTLKEIFLYN 275
Q I YL NL+ L L N +T + P + + N++ L+E++L
Sbjct: 60 QGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNE 119
Query: 276 NSLSGSLPSRIDLALPNLE---FLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIP 332
+++S P L NL LNLG N + S ++N + L L + + P
Sbjct: 120 DNISDISP------LANLTKXYSLNLGANHNLSDL-SPLSNXTGLNYLTVTESKVKDVTP 172
Query: 333 SAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLS 392
I NL +L + +N + +P LA+ L Y N + P + N +
Sbjct: 173 --IANLTDLYSLSLNYNQIEDISP-------LASLTSLHYFTAYVNQITDITP--VANXT 221
Query: 393 LSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNK 452
L L I I+ P + NLS L L +G N +S V L KL+ L++ N+
Sbjct: 222 -RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAV--KDLTKLKXLNVGSNQ 276
Query: 453 LAGSIPDEICLL---SRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIP 506
++ +I +L S+LN L LN N++ +G LT+L L L N T + P
Sbjct: 277 IS-----DISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 172 LKHLFLRENMFYG--KIP--SSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISL-I 226
L +L N++ G KI S+L L+EL+L +N+S P + NLT ++L
Sbjct: 84 LSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGA 141
Query: 227 NNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRI 286
N+ L P + L+ L + + + V P I N++ L + L N + P
Sbjct: 142 NHNLSDLSP--LSNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLA- 196
Query: 287 DLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDI 346
+L +L + +N + P + N ++L L++G+N + P + NL L +I
Sbjct: 197 --SLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKITDLSP--LANLSQLTWLEI 250
Query: 347 FFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCN-- 404
T ++ ++++ + KL+ L +G N + S + NLS +LN F N
Sbjct: 251 -------GTNQISDINAVKDLTKLKXLNVGSNQISDI--SVLNNLS----QLNSLFLNNN 297
Query: 405 -ISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLA 449
+ + IG L+NL L L N+++ P L K D A
Sbjct: 298 QLGNEDXEVIGGLTNLTTLFLSQNHITDIRP--LASLSKXDSADFA 341
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 435 VTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYL 494
VT L+ + L +A K+A I L+ L L+LNGN+I+ S L NL L L
Sbjct: 38 VTQEELESITKLVVAGEKVAS--IQGIEYLTNLEYLNLNGNQITDI--SPLSNLVKLTNL 93
Query: 495 NLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRN-NLSGNI 553
+G+N+ T + S NL ++ ++ + + LA NL ++L N NLS
Sbjct: 94 YIGTNKITDI--SALQNLTNLRELYLNEDNISDISPLA--NLTKXYSLNLGANHNLSDLS 149
Query: 554 PTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPV-SFEKLSYLK 612
P L L +++ ++++ P N+T L SL L+ N+I P+ S L Y
Sbjct: 150 P--LSNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHY-- 203
Query: 613 ELNLSFNKLKGEIPRGGPFANFT 635
F +I P AN T
Sbjct: 204 -----FTAYVNQITDITPVANXT 221
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 93 IANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRL 152
IANL+ L SL L++N++ P + ++++L NQ++ + N + + +++
Sbjct: 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI--TPVANXTRLNSLKI 228
Query: 153 SKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPK 212
NK++ P +L L L + N +++ +L+ L++G N +S
Sbjct: 229 GNNKITDLSP---LANLSQLTWLEIGTNQISDI--NAVKDLTKLKXLNVGSNQISDI--S 281
Query: 213 EIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP 259
+ NL+ L + L NN+L E + IG L NL L L N++T + P
Sbjct: 282 VLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 23/177 (12%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVI--KNIRHRNLVKII-- 788
+G G +GSV A G ++AIK S + + A E++ K+++H N++ ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 789 ----SSCSN-DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
SS N DF LV+ +M L+ + F I + L+ L + H
Sbjct: 110 FTPASSLRNFYDF-YLVMPFMQT-DLQKIMGME------FSEEKIQYLVYQMLKGLKYIH 161
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
S ++H DLKP N+ ++ED + DFG+A+ E T + T Y AP+ I
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVI 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLKSFE--AECEVIKNIRHRNLV 785
+G G FG VY + E +AIK + + AS + E E V+K ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASAL 836
+++ S +++E M+ G L+ L S N + L+ MI +IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 837 EYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
YL+ + +H DL N + ED + DFGM + + D + L + +M+
Sbjct: 139 AYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 897 PDEI 900
P+ +
Sbjct: 196 PESL 199
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 368 KKLRYLGLGGNPLDGFLPSSI--GNLSLSLERLNIAFCNI-SGNIPKAIGNLSNLIVLSL 424
K+L+ L L N L F ++ N+S SLE L+++ ++ S + +++VL+L
Sbjct: 377 KRLQTLILQRNGLKNFFKVALMTKNMS-SLETLDVSLNSLNSHAYDRTCAWAESILVLNL 435
Query: 425 GGNNLSGSIPVTFGGLQ-KLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISS 483
N L+GS+ F L K++ LDL N++ SIP ++ L L EL++ N++
Sbjct: 436 SSNMLTGSV---FRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDG 491
Query: 484 CLGNLTSLQYLNLGSNRFTFVIP 506
LTSLQY+ L N + P
Sbjct: 492 VFDRLTSLQYIWLHDNPWDCTCP 514
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 97 SSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSG--SLSSFTFNTSSILDIRLSK 154
SS L+ + N + ++ T+ L+ L L N L ++ T N SS+ + +S
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412
Query: 155 NKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEI 214
N L+ + C + L L NM G + L ++ +LH
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLH-------------- 458
Query: 215 GNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLY 274
NN++ IP+++ +LQ L L + N L V +++L+ I+L+
Sbjct: 459 ------------NNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505
Query: 275 NNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSS 310
+N D P + +L+ IN SG + +S
Sbjct: 506 DNPW--------DCTCPGIRYLSEWINKHSGVVRNS 533
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 484 CLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDG--PISLAIGNLKAVVG 541
C + +S +LN N FT + LK + + + N L ++L N+ ++
Sbjct: 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLET 407
Query: 542 IDLSRNNL-SGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGS 600
+D+S N+L S T +S+ ++L+ N L G + ++ LDL NN+I S
Sbjct: 408 LDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRI-MS 464
Query: 601 IPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAESFMG---NELLCGLPNLQ 652
IP L L+ELN++ N+LK +P G F T+ ++ N C P ++
Sbjct: 465 IPKDVTHLQALQELNVASNQLKS-VP-DGVFDRLTSLQYIWLHDNPWDCTCPGIR 517
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 446 LDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCL--GNLTSLQYLNLGSNRF-T 502
L+ N S+ L RL L L N + L N++SL+ L++ N +
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417
Query: 503 FVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKS 562
T + IL ++SSN+L G + + V +DL NN +IP + L++
Sbjct: 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDL-HNNRIMSIPKDVTHLQA 474
Query: 563 LQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKE 613
LQ +++A N+L+ F +TSL+ + L +N + P + YL E
Sbjct: 475 LQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSE 521
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 74 KVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIF-TMSTLKVLYLMDN 131
KV L+L + N +IP ++ +L +L+ L+++ N+L S +P +F +++L+ ++L DN
Sbjct: 451 KVKVLDLHN-NRIMSIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDN 507
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIK-VFHPQCASTLK-SFEAECEVIKNIR 780
AT + IG+G +G+VY+AR G +A+K V P L S E +++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 781 ---HRNLVKIISSC----SNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
H N+V+++ C ++ + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
L++LH + I+H DLKP N+L+ L+DFG+A++ S + + T+
Sbjct: 122 LRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTL 175
Query: 893 GYMAPD 898
Y AP+
Sbjct: 176 WYRAPE 181
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 23/177 (12%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVI--KNIRHRNLVKII-- 788
+G G +GSV A G ++AIK S + + A E++ K+++H N++ ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 789 ----SSCSN-DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGH 843
SS N DF LV+ +M L+ + F I + L+ L + H
Sbjct: 92 FTPASSLRNFYDF-YLVMPFMQT-DLQKIMGLK------FSEEKIQYLVYQMLKGLKYIH 143
Query: 844 STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
S ++H DLKP N+ ++ED + DFG+A+ E T + T Y AP+ I
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVI 195
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIK-VFHPQCASTLK-SFEAECEVIKNIR 780
AT + IG+G +G+VY+AR G +A+K V P L S E +++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 781 ---HRNLVKIISSC----SNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
H N+V+++ C ++ + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
L++LH + I+H DLKP N+L+ L+DFG+A++ S + + T+
Sbjct: 122 LRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTL 175
Query: 893 GYMAPD 898
Y AP+
Sbjct: 176 WYRAPE 181
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H DL N ++ D + DFGM + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 898 DEI 900
+ +
Sbjct: 201 ESL 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H DL N ++ D + DFGM + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 898 DEI 900
+ +
Sbjct: 202 ESL 204
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 357 ELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAI-GN 415
+L +S+L L YL L GN L LP+ + + +L+ L + N ++P +
Sbjct: 74 KLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKEL-VLVENQLQSLPDGVFDK 131
Query: 416 LSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEIC-LLSRLNELDLNG 474
L+NL L+L N L F L L LDL++N+L S+P+ + L++L +L L
Sbjct: 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQ 190
Query: 475 NKISGSISSCLGNLTSLQYLNLGSNRFTFVIP 506
N++ LTSLQY+ L N + P
Sbjct: 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 31/195 (15%)
Query: 461 ICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDI 520
I L + L L GNK+ S L LT+L YL L N+ + F D L+
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVF----DKLT--- 109
Query: 521 SSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPES 580
NLK +V L N L + L +L ++LA+N+L+
Sbjct: 110 --------------NLKELV---LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGV 152
Query: 581 FGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAESFM 640
F +T+L LDLS N++ F+KL+ LK+L L N+LK +P G F T+ ++
Sbjct: 153 FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-VP-DGVFDRLTSLQYI 210
Query: 641 ---GNELLCGLPNLQ 652
N C P ++
Sbjct: 211 WLHDNPWDCTCPGIR 225
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 8/166 (4%)
Query: 220 LQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLS 279
++ ++L NKLH + L NL L L N L + ++ LKE+ L N L
Sbjct: 65 VRYLALGGNKLHD--ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ 122
Query: 280 GSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLR 339
SLP + L NL +LNL N + L L++ N L
Sbjct: 123 -SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT 181
Query: 340 NLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLP 385
LK ++ N L S P+ G L + L+Y+ L NP D P
Sbjct: 182 QLKDLRLYQNQL-KSVPD-GVFDRLTS---LQYIWLHDNPWDCTCP 222
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 152 LSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIP 211
L+ N+L LP + + L LK L L EN K L L+L +N L ++P
Sbjct: 92 LTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLP 149
Query: 212 KEI-GNLTVLQRISLINNKLHGEIPQEI-GYLQNLDVLQLGFNNLTGVVPATIFNMSTLK 269
K + LT L + L N+L +P+ + L L L+L N L V +++L+
Sbjct: 150 KGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 208
Query: 270 EIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSS 310
I+L++N D P + +L+ IN SG + +S
Sbjct: 209 YIWLHDNPW--------DCTCPGIRYLSEWINKHSGVVRNS 241
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 370 LRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGN-----LSNLIVLSL 424
+RYL LGGN L ++S E N+ + ++GN +++ N L+NL L L
Sbjct: 65 VRYLALGGNKLH--------DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 425 GGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEIC-LLSRLNELDLNGNKISGSISS 483
N L F L L L+LA N+L S+P + L+ L ELDL+ N++
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEG 175
Query: 484 CLGNLTSLQYLNLGSNRFTFVIPSTF 509
LT L+ L L N+ V F
Sbjct: 176 VFDKLTQLKDLRLYQNQLKSVPDGVF 201
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 828 IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887
+ + I AL YL H +IH D+KPSN+LLDE L DFG++ L +D++ R+
Sbjct: 129 MTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSA 185
Query: 888 TLATIGYMAPDEI 900
A YMAP+ I
Sbjct: 186 GCA--AYMAPERI 196
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCA---STLKSFEAECE 774
F+LLR +IG G + V RL+ I A++V + + + E
Sbjct: 54 FDLLR---------VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 775 VIKNIRHRNLVKIISSCSNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
V + + + + SC + + V+EY++ G L + R +I+
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 163
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK--LLSGEDESTMRTQTLAT 891
AL YLH II+ DLK NVLLD + L+D+GM K L G+ ST T
Sbjct: 164 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF----CGT 216
Query: 892 IGYMAPDEIFVGE---LSLKRWV 911
Y+AP EI GE S+ W
Sbjct: 217 PNYIAP-EILRGEDYGFSVDWWA 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 103/267 (38%), Gaps = 42/267 (15%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR 780
++ +D + IG G FG R + E+ + + A+ ++ + E +++R
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR 74
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+V+ A+++EY S G L+ C F L +
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGE----LYERICNAGRFSEDEARFFFQQLLSGVS 130
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLS--DFGMAKLLSGEDESTMRTQTLATIG---YM 895
+ HS I H DLK N LLD L DFG +K S + +Q +T+G Y+
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYI 184
Query: 896 APDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALEC-TM 954
AP+ + E K A C ++++ + +
Sbjct: 185 APEVLLRQEYDGK--------------------------IADVWSCGVTLYVMLVGAYPF 218
Query: 955 ESPEKRIDAKDTITRLLKIRDTLSKRI 981
E PE+ D + TI R+L ++ ++ I
Sbjct: 219 EDPEEPRDYRKTIQRILSVKYSIPDDI 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAPESI 184
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 431 GSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKIS--GSISSCLGNL 488
G P L+ L+ L NK G+ E+ L S L LDL+ N +S G S
Sbjct: 317 GQFPTL--KLKSLKRLTFTSNK-GGNAFSEVDLPS-LEFLDLSRNGLSFKGCCSQSDFGT 372
Query: 489 TSLQYLNLGSNRFTFVIPSTFWNLKDILSFDIS-SNLLDGPISLAIGNLKAVVGIDLSRN 547
TSL+YL+L N + S F L+ + D SNL +L+ ++ +D+S
Sbjct: 373 TSLKYLDLSFNG-VITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 431
Query: 548 NLSGNIPTTLEGLKSLQNISLAYNRL-EGPIPESFGNMTSLESLDLSNNKISGSIPVSFE 606
+ GL SL+ + +A N E +P+ F + +L LDLS ++ P +F
Sbjct: 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491
Query: 607 KLSYLKELNLSFN 619
LS L+ LN+S N
Sbjct: 492 SLSSLQVLNMSHN 504
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 32/242 (13%)
Query: 242 QNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGIN 301
Q+L+++ F G P + +LK + +N G+ S +DL P+LEFL+L N
Sbjct: 307 QHLELVNCKF----GQFPT--LKLKSLKRLTFTSNK-GGNAFSEVDL--PSLEFLDLSRN 357
Query: 302 --SFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIG------------NLRNLKLFDIF 347
SF G S + L L++ N + +G NL+ + F +F
Sbjct: 358 GLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 417
Query: 348 FN-------NLTSSTPELGFLSSLANCKKLRYLGLGGNPL-DGFLPSSIGNLSLSLERLN 399
+ +++ + + F L L + GN + FLP L +L L+
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLD 476
Query: 400 IAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPD 459
++ C + P A +LS+L VL++ NN + L LQ LD + N + S
Sbjct: 477 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 536
Query: 460 EI 461
E+
Sbjct: 537 EL 538
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 13 QCMELNFYK----IPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPI-SLAIG------NLKAVVGIDLSRNNLSGNIPTT 556
+ + +L + + ++ N PI SLA+G +L+ +V ++ + +L N P
Sbjct: 67 IEDGAYQSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP-- 119
Query: 557 LEGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKISG 599
+ LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 367 CKKLRYLGLGGNPLDGFLPSSIGNLSLS-----------------LERLNIAFCNISGNI 409
C +L + + N LP S NL LS L+ L+++ C I
Sbjct: 14 CMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE 68
Query: 410 PKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNE 469
A +LS+L L L GN + F GL LQ L LA I L L E
Sbjct: 69 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
Query: 470 LDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
L++ N I S + NLT+L++L+L SN+
Sbjct: 129 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 437 FGGLQKLQGLDLAFNKLAGSIPDEICL-LSRLNELDLNGNKISGSISSCLGNLTSLQYLN 495
F GL++L+ LD + L + L L L LD++ + + L+SL+ L
Sbjct: 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451
Query: 496 LGSNRFTF-VIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIP 554
+ N F +P F L+++ D+S L+ A +L ++ +++S NN
Sbjct: 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 511
Query: 555 TTLEGLKSLQNISLAYNRLEGPIPESFGNM-TSLESLDLSNNKIS 598
+ L SLQ + + N + + + +SL L+L+ N +
Sbjct: 512 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 370 LRYLGLGGNPLDGFLPSSIGNLSL-SLERLNIAFCNISGNIPKAIG-NLSNLIVLSLGGN 427
L+YL L N G + S L L LE L+ N+ ++ +L NLI L +
Sbjct: 375 LKYLDLSFN---GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 431
Query: 428 NLSGSIPVTFGGLQKLQGLDLAFNKLAGS-IPDEICLLSRLNELDLNGNKISGSISSCLG 486
+ + F GL L+ L +A N + +PD L L LDL+ ++ +
Sbjct: 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491
Query: 487 NLTSLQYLNLGSNRF 501
+L+SLQ LN+ N F
Sbjct: 492 SLSSLQVLNMSHNNF 506
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 241 LQNLDVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLG 299
L+NL L + + T V IFN +S+L+ + + NS + I L NL FL+L
Sbjct: 420 LRNLIYLDISHTH-TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 300 INSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNN-LTSSTPEL 358
P++ + S L +L M N+F L +L++ D N+ +TS EL
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 538
Query: 359 G-FLSSLA 365
F SSLA
Sbjct: 539 QHFPSSLA 546
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKIIS 789
+G GGF + D E+ P+ + E + +++ H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849
++DF +VLE SL + LH AL + I +YLH +IH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 138
Query: 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL-ATIGYMAPD 898
DLK N+ L+ED+ + DFG+A + + E R + L T Y+AP+
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPE 185
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 196/493 (39%), Gaps = 79/493 (16%)
Query: 170 RYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNK 229
++LKHLFL + + + L+ LHLG N++S E L+ + NN
Sbjct: 104 KFLKHLFLTQTGISNLEFIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDFQNNA 163
Query: 230 LHGEIPQEIGYLQNLDVLQLGFN--NLTGVVPATIFNM---------------------- 265
+H ++ L+ L L FN ++ G+ P +
Sbjct: 164 IHYISRKDTNSLEQATNLSLNFNGNDIKGIEPGAFISKIFQSLKFGGSLNLFIIFKGLQN 223
Query: 266 STLKEIFL--YNNSLSGSLPSRIDLALPNL--EFLNLGINSFSGTIPSSITNASKLILLE 321
STL+ ++L + ++ L S L ++ E +NL + FS S+ +++ L+
Sbjct: 224 STLQSLWLGTFEDTDDQYLTSATFEGLCDMSVESINLQKHRFSDLSSSTFRCFTRVQELD 283
Query: 322 MGSNSFSGFIPSAIGNLRNLKL-------FDIFFNNLTSSTPELGFLSSLANCKKLRYLG 374
+ + +G +PS I + +LK FD +S P L L N +R L
Sbjct: 284 LTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGN---MRKLD 339
Query: 375 LGGNPLDGFLPSSIGNLSLSLERLNIA-FCNISGNIPKAIGNLSNLIVLSLGGNNLSGSI 433
LG L+ ++ L LS + + CN+ + NL +L L+L N G
Sbjct: 340 LGTRCLEKL--ENLQKLDLSHSDIEASDCCNLQ------LKNLRHLQYLNLSYNEPLGLE 391
Query: 434 PVTFGGLQKLQGLDLAFNKLAGSIPDE-ICLLSRLNELDLNGNKISGSISSCLGNLTSLQ 492
F +L+ LD+AF L P L L L+L+ + S L L L+
Sbjct: 392 DQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLR 451
Query: 493 YLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVG----IDLSRNN 548
+LNL N F DG IS NL +VG + LS N
Sbjct: 452 HLNLQGNSFQ-----------------------DGSISKT--NLLQMVGSLEILILSSCN 486
Query: 549 LSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKL 608
L GL+++ ++ L++N L G ++ ++ L L++++N I P L
Sbjct: 487 LLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPAL 545
Query: 609 SYLKELNLSFNKL 621
S +NLS N L
Sbjct: 546 SQQSIINLSHNPL 558
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 71/384 (18%)
Query: 297 NLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTP 356
NLG+ T+P++ +LE N F+P+ I N +L ++ F +LT
Sbjct: 20 NLGLREIPDTLPNTTE------VLEFSFN----FLPT-IQNTTFSRLINLIFLDLTRCQI 68
Query: 357 ELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNL 416
+ + +L + L GNPL +S+ L+ L + IS + NL
Sbjct: 69 NWVHEDTFQSHHQLNTIVLTGNPLIFMAETSLTGPKF-LKHLFLTQTGISNLEFIPVHNL 127
Query: 417 SNLIVLSLGGNNLSG-SIPVTFGGLQKLQGLDLAFNKLAG-SIPDEICLLSRLN-ELDLN 473
NL L LG N++S ++P F Q L+ LD N + S D L N L+ N
Sbjct: 128 ENLESLHLGSNHISSINLPENFPT-QNLKVLDFQNNAIHYISRKDTNSLEQATNLSLNFN 186
Query: 474 GNKISG-----SISSCLGNL-----------------TSLQYLNLGSNRFT---FVIPST 508
GN I G IS +L ++LQ L LG+ T ++ +T
Sbjct: 187 GNDIKGIEPGAFISKIFQSLKFGGSLNLFIIFKGLQNSTLQSLWLGTFEDTDDQYLTSAT 246
Query: 509 FWNLKD--ILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNI 566
F L D + S ++ + S V +DL+ +L+G +P+ +EG+ SL+ +
Sbjct: 247 FEGLCDMSVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNG-LPSGIEGMNSLKKL 305
Query: 567 SL---AYNRLEGPIPESF---------GNM-------------TSLESLDLSNNKISGS- 600
L ++++L SF GNM +L+ LDLS++ I S
Sbjct: 306 VLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASD 365
Query: 601 -IPVSFEKLSYLKELNLSFNKLKG 623
+ + L +L+ LNLS+N+ G
Sbjct: 366 CCNLQLKNLRHLQYLNLSYNEPLG 389
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 136/363 (37%), Gaps = 40/363 (11%)
Query: 217 LTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNN 276
T +Q + L L+G +P I + +L L L N+ + + +L+++++ N
Sbjct: 276 FTRVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGN 334
Query: 277 SLSGSLPSRIDLALPNLEFLNLGINSF--SGTIPSSITNASKLILLEMGSNSFSGFIPSA 334
L +R L NL+ L+L + S + N L L + N G A
Sbjct: 335 MRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQA 394
Query: 335 IGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLS 394
L+L D+ F +L P S N LR L L LD + L
Sbjct: 395 FKECPQLELLDVAFTHLHVKAPH----SPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQ-D 449
Query: 395 LERLNIAFCNIS-GNIPKA--IGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFN 451
L LN+ + G+I K + + +L +L L NL F GL+ + LDL+ N
Sbjct: 450 LRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHN 509
Query: 452 KLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWN 511
L G D + LS L L YLN+ SN + P +
Sbjct: 510 SLTG---DSMDALSHLKGL----------------------YLNMASNNIRIIPP----H 540
Query: 512 LKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYN 571
L LS NL P+ N+ + + + L + TT SL+ + L+
Sbjct: 541 LLPALSQQSIINLSHNPLDCTCSNIHFITWYKENLHKLEDSEETTCANPPSLRGVKLSDV 600
Query: 572 RLE 574
+L
Sbjct: 601 KLH 603
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 130/297 (43%), Gaps = 13/297 (4%)
Query: 74 KVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQL 133
+V L+L++ +L G +P I ++SLK L L+ N + + +L+ LY+ N
Sbjct: 278 RVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMR 336
Query: 134 SGSLSSFTFNT-SSILDIRLSKNKLSGKLPENICN----HLRYLKHLFLRENMFYGKIPS 188
L + ++ + LS + + + CN +LR+L++L L N G
Sbjct: 337 KLDLGTRCLEKLENLQKLDLSHSDIEAS---DCCNLQLKNLRHLQYLNLSYNEPLGLEDQ 393
Query: 189 SLSKCKQLQELHLGYNNLSGAIPKE-IGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVL 247
+ +C QL+ L + + +L P NL +L+ ++L + L + LQ+L L
Sbjct: 394 AFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHL 453
Query: 248 QLGFNNLT--GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSG 305
L N+ + + M EI + ++ S+ + L N+ L+L NS +G
Sbjct: 454 NLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTG 513
Query: 306 TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLS 362
++++ K + L M SN+ P + L + ++ N L + + F++
Sbjct: 514 DSMDALSHL-KGLYLNMASNNIRIIPPHLLPALSQQSIINLSHNPLDCTCSNIHFIT 569
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 147/337 (43%), Gaps = 55/337 (16%)
Query: 63 WIGIICDVNSHKVTT--------LNLSSFNLQGTIPPEIAN-----LSSLKSLDLSHNKL 109
W+G D + +T+ +++ S NLQ ++++ + ++ LDL+ L
Sbjct: 230 WLGTFEDTDDQYLTSATFEGLCDMSVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAHL 289
Query: 110 SSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHL 169
+ +PS I M++LK L L N +F+ ++ + P
Sbjct: 290 NG-LPSGIEGMNSLKKLVLNAN---------SFDQLCQIN--------AASFPS------ 325
Query: 170 RYLKHLFLRENMFYGKIPSS-LSKCKQLQELHLGYNNL--SGAIPKEIGNLTVLQRISLI 226
L+ L+++ NM + + L K + LQ+L L ++++ S ++ NL LQ ++L
Sbjct: 326 --LRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLS 383
Query: 227 NNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRI 286
N+ G Q L++L + F +L P + F L + ++ L + +
Sbjct: 384 YNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHL 443
Query: 287 DLALPNLEFLNLGINSFS-GTIPSSITNASKLI----LLEMGSNSFSGFIPSAIGNLRNL 341
L +L LNL NSF G+I S TN +++ +L + S + A LRN+
Sbjct: 444 LAGLQDLRHLNLQGNSFQDGSI--SKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNV 501
Query: 342 KLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGN 378
D+ N+LT + + +L++ K L YL + N
Sbjct: 502 NHLDLSHNSLTGDS-----MDALSHLKGL-YLNMASN 532
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 734 IGIGGFGSVYRARLEDG-VEIAIKVFHP------QCASTLKSFEA-------ECEVIKNI 779
+G G +G V + ++G E AIKV + + K+ E E ++K++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839
H N++K+ + + LV E+ G L + + + + + NIM I S + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL 162
Query: 840 HFGHSTPIIHCDLKPSNVLLDED---MVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
H I+H D+KP N+LL+ + + DFG++ S + +R + L T Y+A
Sbjct: 163 H---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKLRDR-LGTAYYIA 216
Query: 897 PD 898
P+
Sbjct: 217 PE 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL---------NIFCRLNIMI----D 831
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 157 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 892 IGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 214 LKWMAPETIF 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-------NIFCRLNIMI----DIA 833
++ +C+ +V+ E+ G+L L S F L +I +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+E+L S IH DL N+LL E V + DFG+A+ + + + + +
Sbjct: 155 KGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 894 YMAPDEIF 901
+MAP+ IF
Sbjct: 212 WMAPETIF 219
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIK-VFHPQCASTLK-SFEAECEVIKNIR 780
AT + IG+G +G+VY+AR G +A+K V P L S E +++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 781 ---HRNLVKIISSC----SNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832
H N+V+++ C ++ + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
L++LH + I+H DLKP N+L+ L+DFG+A++ S + + T+
Sbjct: 122 LRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTL 175
Query: 893 GYMAPD 898
Y AP+
Sbjct: 176 WYRAPE 181
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-------NIFCRLNIMI----DIA 833
++ +C+ +V+ E+ G+L L S F L +I +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
+E+L S IH DL N+LL E V + DFG+A+ + + + + +
Sbjct: 155 KGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 894 YMAPDEIF 901
+MAP+ IF
Sbjct: 212 WMAPETIF 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 189
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 187
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 181
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 184
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 186
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 184
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 733 IIGIGGFGSVYRARLEDGVEI-AIKV---FHPQCASTLKSFEAECEVIKNIRHRNLVKII 788
+IG G FG V R + ++ A+K+ F S F E +++ +V++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ +D + +V+EYM G L + + SN + ++ AL+ +H S +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLI 196
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR--TQTLATIGYMAPD 898
H D+KP N+LLD+ L+DFG + DE+ M + T Y++P+
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKM---DETGMVHCDTAVGTPDYISPE 245
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 734 IGIGGFGSVYRA--RLEDGVEIAIKVFHP-QCASTLKSFEAECEVIKNIR-HRNLVKIIS 789
+G G +G V+++ R V K+F Q ++ + E ++ + H N+V +++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 790 --SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPI 847
ND LV +YM E LH+ A NI ++ + ++ + + HS +
Sbjct: 77 VLRADNDRDVYLVFDYM-----ETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 848 IHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG-------------------EDESTMRTQT 888
+H D+KPSN+LL+ + ++DFG+++ +D+ + T
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 889 LATIGYMAPDEIFVG 903
+AT Y AP EI +G
Sbjct: 191 VATRWYRAP-EILLG 204
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 128
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 129 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 182
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 183 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 236
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 237 DEYFSNTSALAKDFIRRLL 255
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 128
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 129 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 182
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 183 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 236
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 237 DEYFSNTSALAKDFIRRLL 255
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 725 TDNFAENNIIGIGGFGSVYR-ARLEDGVEIAIKVFHPQCASTLKSFEAECEVI-KNIRHR 782
+D + IG+G + R +E A+KV + + E E++ + +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQHP 81
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALEYL 839
N++ + + LV E M G L D + F ++ I +EYL
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKI----LRQKFFSEREASFVLHTIGKTVEYL 137
Query: 840 HFGHSTPIIHCDLKPSNVL-LDED---MVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895
H S ++H DLKPSN+L +DE + DFG AK L E+ M T ++
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM--TPCYTANFV 192
Query: 896 APD 898
AP+
Sbjct: 193 APE 195
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 195/465 (41%), Gaps = 102/465 (21%)
Query: 241 LQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSG-SLPSRIDLA-LPNLEFLNL 298
L++L +Q G +++ +P + N TL+ ++L +N +S LP L L+F N
Sbjct: 107 LKHLFFIQTGISSI-DFIP--LHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNN 163
Query: 299 GINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAI----------GNLRNLKLFDIFF 348
I+ S SS+ A+ L L + N +G P A G +NL + F
Sbjct: 164 AIHYLSKEDMSSLQQATNLSL-NLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL---VIF 219
Query: 349 NNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSI--GNLSLSLERLNIA---FC 403
L +ST + SL +LG + D + ++ G +S+E +N+ F
Sbjct: 220 KGLKNST-----IQSL-------WLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF 267
Query: 404 NISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKL-------AGS 456
NIS N S L L L +LS +P GL L+ L L+ NK A +
Sbjct: 268 NISSN---TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323
Query: 457 IPD-------------EI---CL--LSRLNELDLNGNKISGSISSC---LGNLTSLQYLN 495
P E+ CL L L ELDL+ + I S C L NL+ LQ LN
Sbjct: 324 FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETS-DCCNLQLRNLSHLQSLN 382
Query: 496 LGSNR---------------------FTFV----IPSTFWNLKDILSFDISSNLLDGPIS 530
L N FT + S F NL + ++S +LLD
Sbjct: 383 LSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSE 442
Query: 531 LAIGNLKAVVGIDLSRNNL-SGNIPTT--LEGLKSLQNISLAYNRLEGPIPESFGNMTSL 587
L A+ ++L N+ GNI T L+ L L+ + L++ L +F ++ +
Sbjct: 443 QLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM 502
Query: 588 ESLDLSNNKISGSIPVSFEKLSYLK--ELNLSFNKLKGEIPRGGP 630
+DLS+N+++ S S E LS+LK LNL+ N + +P P
Sbjct: 503 NHVDLSHNRLTSS---SIEALSHLKGIYLNLASNHISIILPSLLP 544
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 62/355 (17%)
Query: 57 NASICS-WIGIICDVNSHKVT--------TLNLSSFNLQGTIPPEIAN-----LSSLKSL 102
N++I S W+G D++ ++ +++ S NLQ I++ S L+ L
Sbjct: 224 NSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQEL 283
Query: 103 DLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLP 162
DL+ LS +PS + +STLK L L N+
Sbjct: 284 DLTATHLSE-LPSGLVGLSTLKKLVLSANKF----------------------------- 313
Query: 163 ENICN----HLRYLKHLFLRENMFYGKIPSS-LSKCKQLQELHLGYNNL--SGAIPKEIG 215
EN+C + L HL ++ N ++ + L + L+EL L ++++ S ++
Sbjct: 314 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373
Query: 216 NLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIF-NMSTLKEIFLY 274
NL+ LQ ++L N+ + L++L L F L + F N+ LK + L
Sbjct: 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433
Query: 275 NNSLSGSLPSRIDLALPNLEFLNLGINSF-SGTIP--SSITNASKLILLEMGSNSFSGFI 331
++ L S D LP L+ LNL N F G I +S+ +L +L + S
Sbjct: 434 HSLLDISSEQLFD-GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID 492
Query: 332 PSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPS 386
A +L+ + D+ N LTSS+ E +L++ K + YL L N + LPS
Sbjct: 493 QHAFTSLKMMNHVDLSHNRLTSSSIE-----ALSHLKGI-YLNLASNHISIILPS 541
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 51/396 (12%)
Query: 271 IFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGF 330
IF+ +LSG P AL +L F+ GI+S IP + N L L +GSN S
Sbjct: 94 IFMAETALSG--PK----ALKHLFFIQTGISSID-FIP--LHNQKTLESLYLGSNHISSI 144
Query: 331 -IPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIG 389
+P LK+ D N + + E +SSL L L L GN + G P +
Sbjct: 145 KLPKGFPT-EKLKVLDFQNNAIHYLSKE--DMSSLQQATNLS-LNLNGNDIAGIEPGAFD 200
Query: 390 NLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLA 449
S + LN G NL+V+ G N S + G + + D++
Sbjct: 201 --SAVFQSLNF-------------GGTQNLLVIFKGLKN-STIQSLWLGTFEDMDDEDIS 244
Query: 450 FNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTF 509
G +C +S + ++L + S+ + LQ L+L + + +PS
Sbjct: 245 PAVFEG-----LCEMS-VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGL 297
Query: 510 WNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPT-TLEGLKSLQNISL 568
L + +S+N + ++ N ++ + + N + T LE L++L+ + L
Sbjct: 298 VGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDL 357
Query: 569 AYNRLEGP--IPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIP 626
+++ +E N++ L+SL+LS N+ +F++ L+ L+L+F +LK +
Sbjct: 358 SHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417
Query: 627 RGGPFANFT-------AESFM---GNELLCGLPNLQ 652
+ PF N + S + +L GLP LQ
Sbjct: 418 Q-SPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 209/532 (39%), Gaps = 94/532 (17%)
Query: 63 WIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMST 122
WI + H++ TL L++ L ++ +LK L +SS + T
Sbjct: 71 WIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKT 130
Query: 123 LKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMF 182
L+ LYL N +S I+L K + KL + + H +E+M
Sbjct: 131 LESLYLGSNHISS--------------IKLPKGFPTEKL--KVLDFQNNAIHYLSKEDM- 173
Query: 183 YGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIG-------NLTVLQRISLINNKLHGEIP 235
SSL + L L+L N+++G P N Q + +I L
Sbjct: 174 -----SSLQQATNL-SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTI 227
Query: 236 QE--IGYLQNLDVLQLGFNNLTGVVPATI----------FNMST--------LKEIFLYN 275
Q +G +++D + G+ ++ FN+S+ L+E+ L
Sbjct: 228 QSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTA 287
Query: 276 NSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSA- 334
LS LPS + + L L+ L L N F S +N L L + N+ + +
Sbjct: 288 THLS-ELPSGL-VGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC 345
Query: 335 IGNLRNLKLFDIFFNNL-TSSTPELGFLSSLANCKKLRYLGLGGN-PLDGFLPSSIGNLS 392
+ NL NL+ D+ +++ TS L L N L+ L L N PL L +
Sbjct: 346 LENLENLRELDLSHDDIETSDCCNL----QLRNLSHLQSLNLSYNEPLS--LKTEAFKEC 399
Query: 393 LSLERLNIAFCNIS-GNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFN 451
LE L++AF + + NL L VL+L + L S F GL LQ L+L N
Sbjct: 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGN 459
Query: 452 KL-AGSIPD----------EICLLS----------------RLNELDLNGNKISGSISSC 484
G+I EI +LS +N +DL+ N+++ S
Sbjct: 460 HFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEA 519
Query: 485 LGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNL 536
L +L + YLNL SN + ++PS L ILS + NL P+ N+
Sbjct: 520 LSHLKGI-YLNLASNHISIILPS----LLPILSQQRTINLRQNPLDCTCSNI 566
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 26/191 (13%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL----------NIFCRLNIMI---- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 156 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 891 TIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 213 PLKWMAPETIF 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 723 RATDNFAENNI-IGIGGFGSVYRARLED---GVEIAIKVFHPQCASTLKSFEAE----CE 774
R ++A + + +G G FG V+R +ED G + A+K L+ F AE C
Sbjct: 89 REEVHWATHQLRLGRGSFGEVHR--MEDKQTGFQCAVKKV------RLEVFRAEELMACA 140
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
+ + R +V + + + + +E + GSL + C + +
Sbjct: 141 GLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC----LPEDRALYYLGQ 193
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMV-AHLSDFGMAKLLS 877
ALE L + HS I+H D+K NVLL D A L DFG A L
Sbjct: 194 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 237
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 726 DNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCASTLKSFEAEC-----EVIKNI 779
++F +IG G FG V +L++ ++ A+K+ + LK E C +V+ N
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNG 131
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSL-------EDCLHSSNCALNIFCRLNIMIDI 832
+ + + + +D+ LV++Y G L ED L A + I ID
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEMARFYLAEMVIAIDS 190
Query: 833 ASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA-KLLSGEDESTMRTQTLAT 891
L Y +H D+KP N+L+D + L+DFG KL+ ED + + + T
Sbjct: 191 VHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSVAVGT 239
Query: 892 IGYMAPD 898
Y++P+
Sbjct: 240 PDYISPE 246
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 723 RATDNFAENNI-IGIGGFGSVYRARLED---GVEIAIKVFHPQCASTLKSFEAE----CE 774
R ++A + + +G G FG V+R +ED G + A+K L+ F AE C
Sbjct: 70 REEVHWATHQLRLGRGSFGEVHR--MEDKQTGFQCAVKKV------RLEVFRAEELMACA 121
Query: 775 VIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS 834
+ + R +V + + + + +E + GSL + C + +
Sbjct: 122 GLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC----LPEDRALYYLGQ 174
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLDEDMV-AHLSDFGMAKLLS 877
ALE L + HS I+H D+K NVLL D A L DFG A L
Sbjct: 175 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA-----STLKSFEAECEVIKNIRHRNLVKII 788
IG G FG V++ A+ V C S + F E ++ H ++VK+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ + L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 564
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 71 NSHKVTTLNLSSFNLQG--TIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYL 128
N KVTT S QG +P I +S + + L N++S +S + L +L+L
Sbjct: 9 NEPKVTT----SCPQQGLQAVPTGIP--ASSQRIFLHGNRISYVPAASFQSCRNLTILWL 62
Query: 129 MDNQLSGSLSSFTFNTSSILD-IRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIP 187
N L+G + + F ++L+ + LS N + L +L L L P
Sbjct: 63 HSNALAG-IDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGP 121
Query: 188 SSLSKCKQLQELHLGYNNLSGAIP----KEIGNLTVLQRISLINNKLHGEIPQEIGYLQN 243
LQ L+L NNL A+P +++GNLT + L N++ L +
Sbjct: 122 GLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLT---HLFLHGNRIPSVPEHAFRGLHS 177
Query: 244 LDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSF 303
LD L L N++ V P ++ L ++L+ N+LS LP+ + + L +L++L L N +
Sbjct: 178 LDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDNPW 236
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
Query: 418 NLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFN-KLAGSIPDEICLLSRLNELDLNGNK 476
NL +L L N L+G F GL L+ LDL+ N +L P L L+ L L+
Sbjct: 56 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 115
Query: 477 ISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNL 536
+ L +LQYL L N + +TF +L ++ + N + A L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 175
Query: 537 KAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNN 595
++ + L +N+++ P L L + L N L E + SL+ L L++N
Sbjct: 176 HSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 362 SSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIA-FCNISGNIPKAIGNLSNLI 420
+S +C+ L L L N L G ++ L+L LE+L+++ + P L +L
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTL-LEQLDLSDNAQLRVVDPTTFRGLGHLH 107
Query: 421 VLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICL-LSRLNELDLNGNKISG 479
L L L P F GL LQ L L N L ++PD L L L L+GN+I
Sbjct: 108 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLTHLFLHGNRIPS 166
Query: 480 SISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL 525
L SL L L N V P F +L +++ + +N L
Sbjct: 167 VPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 65/235 (27%), Positives = 94/235 (40%), Gaps = 32/235 (13%)
Query: 266 STLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSN 325
++ + IFL+ N +S +P+ + NL L L N+ +G ++ T + L L++ N
Sbjct: 31 ASSQRIFLHGNRIS-YVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDN 89
Query: 326 SFSGFI-PSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFL 384
+ + P+ L +L + L P G LA L+YL L N L L
Sbjct: 90 AQLRVVDPTTFRGLGHLHTLHLDRCGLQELGP--GLFRGLA---ALQYLYLQDNNLQA-L 143
Query: 385 PSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQ 444
P N + +GNL++L L GN + F GL L
Sbjct: 144 PD---------------------NTFRDLGNLTHLF---LHGNRIPSVPEHAFRGLHSLD 179
Query: 445 GLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSN 499
L L N +A P L RL L L N +S + L L SLQYL L N
Sbjct: 180 RLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Query: 467 LNELDLNGNKISGSISSCLGNLTSLQYLNLGSN-RFTFVIPSTFWNLKDILSFDISSNLL 525
L L L+ N ++G ++ LT L+ L+L N + V P+TF L + + + L
Sbjct: 57 LTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGL 116
Query: 526 DGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMT 585
L A+ + L NNL T L +L ++ L NR+ +F +
Sbjct: 117 QELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLH 176
Query: 586 SLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
SL+ L L N ++ P +F L L L L N L
Sbjct: 177 SLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 472 LNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSN----LLDG 527
L+GN+IS ++ + +L L L SN + + F L + D+S N ++D
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 528 PISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSL 587
+G+L + L R L P GL +LQ + L N L+ +F ++ +L
Sbjct: 98 TTFRGLGHLHT---LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNL 154
Query: 588 ESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
L L N+I +F L L L L N +
Sbjct: 155 THLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHV 188
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 542 IDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNN-KISGS 600
I L N +S + + ++L + L N L G +F +T LE LDLS+N ++
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 601 IPVSFEKLSYLKELNL 616
P +F L +L L+L
Sbjct: 96 DPTTFRGLGHLHTLHL 111
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCA---STLKSFEAECE 774
F+LLR +IG G + V RL+ I A+KV + + + E
Sbjct: 11 FDLLR---------VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 61
Query: 775 VIKNIRHRNLVKIISSCSNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
V + + + + SC + + V+EY++ G L + R +I+
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 120
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK--LLSGEDESTMRTQTLAT 891
AL YLH II+ DLK NVLLD + L+D+GM K L G+ S T
Sbjct: 121 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF----CGT 173
Query: 892 IGYMAPDEIFVGE---LSLKRWV 911
Y+AP EI GE S+ W
Sbjct: 174 PNYIAP-EILRGEDYGFSVDWWA 195
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 32/213 (15%)
Query: 697 RGTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRA-RLEDGVEIAI 755
RG+M +D++ D + +IG G F V R E G + A+
Sbjct: 14 RGSMADDDVLFE-----------------DVYELCEVIGKGPFSVVRRCINRETGQQFAV 56
Query: 756 KV-----FHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLE 810
K+ F + + + E + ++H ++V+++ + S+D +V E+M L
Sbjct: 57 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 115
Query: 811 DCLHSSNCALNIFCRLNIMID--IASALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVA 865
C A F + + LE L + H IIH D+KP VLL +
Sbjct: 116 -CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPV 174
Query: 866 HLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
L FG+A L + + + T +MAP+
Sbjct: 175 KLGGFGVAIQLG--ESGLVAGGRVGTPHFMAPE 205
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 19/116 (16%)
Query: 770 EAECEVIKNIRHRNLVKIISSCSNDDFKAL--VLEYMSNGSLEDCLHSSN------C-AL 820
+ E ++++ +RH+N+++++ N++ + + V+EY G +++ L S C A
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAH 112
Query: 821 NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876
FC+L ID LEYLH S I+H D+KP N+LL +S G+A+ L
Sbjct: 113 GYFCQL---ID---GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCA---STLKSFEAECE 774
F+LLR +IG G + V RL+ I A+KV + + + E
Sbjct: 7 FDLLR---------VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 57
Query: 775 VIKNIRHRNLVKIISSCSNDDFKAL-VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
V + + + + SC + + V+EY++ G L + R +I+
Sbjct: 58 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 116
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK--LLSGEDESTMRTQTLAT 891
AL YLH II+ DLK NVLLD + L+D+GM K L G+ S T
Sbjct: 117 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF----CGT 169
Query: 892 IGYMAPDEIFVGE---LSLKRWV 911
Y+AP EI GE S+ W
Sbjct: 170 PNYIAP-EILRGEDYGFSVDWWA 191
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 39/255 (15%)
Query: 395 LERLNIAFCNISGNIPKA--IGNLSNLIVLSLGGNNLSGSIPVTFG-GLQKLQGLDLAFN 451
LE L + CN+ G + L++L +L L NN+ P +F +++ LDL FN
Sbjct: 105 LEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164
Query: 452 KLAGSIPDEICL----------------LSRLNELDLNGNKISGSISSCLGNLTSLQYLN 495
K+ SI +E L L +NE L K + TS+ L+
Sbjct: 165 KVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN-----TSITTLD 218
Query: 496 LGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPT 555
L N F + F++ I I S +L ++ G N
Sbjct: 219 LSGNGFKESMAKRFFDA--IAGTKIQSLILSNSYNM---------GSSFGHTNFKDPDNF 267
Query: 556 TLEGLKS--LQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKE 613
T +GL++ ++ L+ +++ + F + T LE L L+ N+I+ +F L++LKE
Sbjct: 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKE 327
Query: 614 LNLSFNKLKGEIPRG 628
L L N+LK +P G
Sbjct: 328 LALDTNQLKS-VPDG 341
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRA---RLEDGVEIA-IKVFHPQCASTLKSFEAECEVIKNIRH 781
D + +G G +G VY+A + V I I++ H + + E ++K ++H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQH 92
Query: 782 RNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841
RN++++ S ++ L+ EY N + + + ++ + + + ++F
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSF-----LYQLINGVNF 147
Query: 842 GHSTPIIHCDLKPSNVLL-----DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896
HS +H DLKP N+LL E V + DFG+A+ T + T+ Y
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRP 205
Query: 897 PDEIFVG 903
P EI +G
Sbjct: 206 P-EILLG 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 203 LPLKWMAPETIF 214
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 203 LPLKWMAPETIF 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 212 LPLKWMAPETIF 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 27/274 (9%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEA 771
F+ + D + +G G F V + R + G+E A K + + + E
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER 64
Query: 772 ECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID 831
E +++ + H N++ + N L+LE +S G L D L + +L+ + +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNV-LLDEDM-VAHLS--DFGMAKLLSGEDESTMRTQ 887
I + YL H+ I H DLKP N+ LLD+++ + H+ DFG+A + ED +
Sbjct: 124 ILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN- 177
Query: 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIF 946
T ++AP+ + L L+ D+ + ++ + LLSG K++ L +I
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLE---ADMWSIGVITYI---LLSGASPFLGDTKQETLANIT 231
Query: 947 SLALECTMESPEKRID-AKDTITRLLKIRDTLSK 979
+++ + E + + AKD I +LL +++T +
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLL-VKETRKR 264
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRARLEDGVEI-AIKVFHPQCA---STLKSFEAECE 774
F+LLR +IG G + V RL+ I A+KV + + + E
Sbjct: 22 FDLLR---------VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 775 VIKNIRHRNLVKIISSCSNDDFK-ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
V + + + + SC + + V+EY++ G L + R +I+
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 131
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK--LLSGEDESTMRTQTLAT 891
AL YLH II+ DLK NVLLD + L+D+GM K L G+ S T
Sbjct: 132 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF----CGT 184
Query: 892 IGYMAPDEIFVGE---LSLKRWV 911
Y+AP EI GE S+ W
Sbjct: 185 PNYIAP-EILRGEDYGFSVDWWA 206
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR 780
++ TD + IG+G + R +E A+K+ + E +++ +
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALE 837
H N++ + + + +V E M G L D + F ++ I +E
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKI----LRQKFFSEREASAVLFTITKTVE 130
Query: 838 YLHFGHSTPIIHCDLKPSNVL-LDED---MVAHLSDFGMAKLLSGED 880
YLH + ++H DLKPSN+L +DE + DFG AK L E+
Sbjct: 131 YLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 734 IGIGGFGSVYRA-RLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKII-- 788
IG G F +VY+ E VE+A + S + F+ E E +K ++H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 789 --SSCSNDDFKALVLEYMSNGSLEDCLHSSNC----ALNIFCRLNIMIDIASALEYLHFG 842
S+ LV E ++G+L+ L L +CR I L++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----QILKGLQFLH-T 147
Query: 843 HSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPD 898
+ PIIH DLK N+ + + D G+A L ++ + T + AP+
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE 200
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI-RHRNLV 785
+G G FG V A + + + +A+K+ P T + + +E +V+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLH---------SSNCALNIFCRLNIMIDIASAL 836
++ +C+ ++ EY G L + L ++ A+ L + ++ +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 837 EY-----LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
Y + F S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 892 IGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 234 VKWMAPESIF 243
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L + +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L HS I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPAF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLE---ADMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H +L N ++ D + DFGM + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 898 DEI 900
+ +
Sbjct: 202 ESL 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H +L N ++ D + DFGM + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 898 DEI 900
+ +
Sbjct: 203 ESL 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 212 LPLKWMAPETIF 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSV----YRARLEDGVEIAIKVFHPQCASTLKS-FEAECEVIKNIRHRNLVKII 788
IG G FG V Y + + +AIK + +++ F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 184
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI-RHRNLV 785
+G G FG V A + + + +A+K+ P T + + +E +V+ + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLH---------SSNCALNIFCRLNIMIDIASAL 836
++ +C+ ++ EY G L + L ++ A+ L + ++ +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 837 EY-----LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
Y + F S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 167 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 892 IGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 227 VKWMAPESIF 236
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 159/390 (40%), Gaps = 63/390 (16%)
Query: 241 LQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLE-FLNLG 299
L+NL+ L LG N+++ + F LK + NN++ SR D+ +LE +NL
Sbjct: 125 LENLESLYLGSNHISSIKFPKDFPARNLKVLDFQNNAI--HYISREDMR--SLEQAINLS 180
Query: 300 INSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELG 359
+N F+G I E+G+ + F G NL + FN L +ST +
Sbjct: 181 LN-FNGNNVKGI---------ELGAFDSTIFQSLNFGGTPNLS---VIFNGLQNSTTQSL 227
Query: 360 FLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNL 419
+L + + + + L G S+ +L+L R F +IS + L
Sbjct: 228 WLGTF---EDIDDEDISSAMLKGLCEMSVESLNLQEHR----FSDISSTTFQCFTQLQE- 279
Query: 420 IVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISG 479
L L +L G +P GL L+ L L+ N D++C +S N L I G
Sbjct: 280 --LDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF-----DQLCQISAANFPSLTHLYIRG 331
Query: 480 SISS------CLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAI 533
++ CL L +LQ L+L N DI + D SL +
Sbjct: 332 NVKKLHLGVGCLEKLGNLQTLDLSHN--------------DIEASDC--------CSLQL 369
Query: 534 GNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPES-FGNMTSLESLDL 592
NL + ++LS N G + L+ + LA+ RL P+S F N+ L+ L+L
Sbjct: 370 KNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNL 429
Query: 593 SNNKISGSIPVSFEKLSYLKELNLSFNKLK 622
+ + S L L+ LNL N +
Sbjct: 430 TYCFLDTSNQHLLAGLPVLRHLNLKGNHFQ 459
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 31/250 (12%)
Query: 404 NISGNIPKAI--GNLSNLIVLSLGGNNLSGS--IPVTFGGLQK--LQGL------DLAFN 451
N +GN K I G + I SL N G+ + V F GLQ Q L D+
Sbjct: 182 NFNGNNVKGIELGAFDSTIFQSL---NFGGTPNLSVIFNGLQNSTTQSLWLGTFEDIDDE 238
Query: 452 KLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWN 511
++ ++ +C +S + L+L ++ S S+ T LQ L+L + +PS
Sbjct: 239 DISSAMLKGLCEMS-VESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLK-GLPSGMKG 296
Query: 512 LKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPT------TLEGLKSLQN 565
L + +S N D ++ N ++ + + GN+ LE L +LQ
Sbjct: 297 LNLLKKLVLSVNHFDQLCQISAANFPSLTHL-----YIRGNVKKLHLGVGCLEKLGNLQT 351
Query: 566 ISLAYNRLEGP--IPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKG 623
+ L++N +E N++ L++L+LS+N+ G +F++ L+ L+L+F +L
Sbjct: 352 LDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHI 411
Query: 624 EIPRGGPFAN 633
P+ PF N
Sbjct: 412 NAPQ-SPFQN 420
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 133/335 (39%), Gaps = 62/335 (18%)
Query: 297 NLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTP 356
NLG++ T+P++ LE N F+P+ I N +L ++ F +LT
Sbjct: 18 NLGLSEIPDTLPNTTE------FLEFSFN----FLPT-IHNRTFSRLMNLTFLDLTRCQI 66
Query: 357 ELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNL 416
+ + +L L L GNPL F+ + N SL+ L + IS + NL
Sbjct: 67 NWIHEDTFQSHHQLSTLVLTGNPLI-FMAETSLNGPKSLKHLFLIQTGISNLEFIPVHNL 125
Query: 417 SNLIVLSLGGNNLSG-SIPVTFGGLQKLQGLDLAFNKLAG-SIPDEICLLSRLN-ELDLN 473
NL L LG N++S P F + L+ LD N + S D L +N L+ N
Sbjct: 126 ENLESLYLGSNHISSIKFPKDFPA-RNLKVLDFQNNAIHYISREDMRSLEQAINLSLNFN 184
Query: 474 GNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAI 533
GN + G I + T Q LN G VI + N SL +
Sbjct: 185 GNNVKG-IELGAFDSTIFQSLNFGGTPNLSVIFNGLQN--------------STTQSLWL 229
Query: 534 GNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLS 593
G + + D+S L+GL + S+ESL+L
Sbjct: 230 GTFEDIDDEDISS--------AMLKGLCEM----------------------SVESLNLQ 259
Query: 594 NNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRG 628
++ S +F+ + L+EL+L+ LKG +P G
Sbjct: 260 EHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSG 293
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 139/579 (24%), Positives = 238/579 (41%), Gaps = 84/579 (14%)
Query: 62 SWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMS 121
+WI + H+++TL L+ L + SLK L L +S+ + +
Sbjct: 67 NWIHEDTFQSHHQLSTLVLTGNPLIFMAETSLNGPKSLKHLFLIQTGISNLEFIPVHNLE 126
Query: 122 TLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENM 181
L+ LYL N +S S K P++ R LK L + N
Sbjct: 127 NLESLYLGSNHIS-----------------------SIKFPKDFP--ARNLKVLDFQNNA 161
Query: 182 FYGKIPSSLSKCKQLQELHLGY--NNLSGAIPKEIGNL--TVLQRISLINNKLHGEIPQE 237
+ + +Q L L + NN+ G E+G T+ Q ++ G P
Sbjct: 162 IHYISREDMRSLEQAINLSLNFNGNNVKGI---ELGAFDSTIFQSLNF------GGTP-- 210
Query: 238 IGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLN 297
NL V+ FN L +++ + T ++I + S S L +++ +E LN
Sbjct: 211 -----NLSVI---FNGLQNSTTQSLW-LGTFEDIDDEDIS-SAMLKGLCEMS---VESLN 257
Query: 298 LGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLK-------LFDIFFNN 350
L + FS ++ ++L L++ + G +PS + L LK FD
Sbjct: 258 LQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQI 316
Query: 351 LTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGN-- 408
++ P L L N KKL +LG+G +GN L+ L+++ +I +
Sbjct: 317 SAANFPSLTHLYIRGNVKKL-HLGVG-------CLEKLGN----LQTLDLSHNDIEASDC 364
Query: 409 IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDE-ICLLSRL 467
+ NLS+L L+L N G F +L+ LDLAF +L + P L L
Sbjct: 365 CSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFL 424
Query: 468 NELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDI---SSNL 524
L+L + S L L L++LNL N F + L+ + S ++ SS
Sbjct: 425 QVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCG 484
Query: 525 LDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNM 584
L A +L + +DLS N+L+ + +L LK + ++LA N + P +
Sbjct: 485 LLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIY-LNLAANSINIISPRLLPIL 543
Query: 585 TSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKG 623
+ +++LS+N + + + L++ KE + +KL+G
Sbjct: 544 SQQSTINLSHNPLDCTCS-NIHFLTWYKE---NLHKLEG 578
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI-RHRNLV 785
+G G FG V A + + + +A+K+ P T + + +E +V+ + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLH---------SSNCALNIFCRLNIMIDIASAL 836
++ +C+ ++ EY G L + L ++ A+ L + ++ +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 837 EY-----LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
Y + F S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 169 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 892 IGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 229 VKWMAPESIF 238
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI-RHRNLV 785
+G G FG V A + + + +A+K+ P T + + +E +V+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLH---------SSNCALNIFCRLNIMIDIASAL 836
++ +C+ ++ EY G L + L ++ A+ L + ++ +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 837 EY-----LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
Y + F S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 892 IGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 234 VKWMAPESIF 243
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCASTLK-SFEAECEVIKNI-RHRNLV 785
+G G FG V A + + + +A+K+ P T + + +E +V+ + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 786 KIISSCSNDDFKALVLEYMSNGSLEDCLH---------SSNCALNIFCRLNIMIDIASAL 836
++ +C+ ++ EY G L + L ++ A+ L + ++ +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 837 EY-----LHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
Y + F S IH DL N+LL + + DFG+A+ + + ++
Sbjct: 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 892 IGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 211 VKWMAPESIF 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 731 NNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-HRNLVKII 788
++ GGF VY A+ + G E A+K ++ E +K + H N+V+
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 789 SSCS-----NDDFKA--LVLEYMSNGSLEDCLHSSNCALNIFCR--LNIMIDIASALEYL 839
S+ S +D +A L+L + G L + L + C L I A++++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 840 HFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATI 892
H PIIH DLK N+LL L DFG A +S + + Q A +
Sbjct: 153 H-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQCA-----STLKSFEAECEVIKNIRHRNLVKII 788
IG G FG V++ A+ V C S + F E ++ H ++VK+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 789 SSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPII 848
+ + +++E + G L L +L++ + +++AL YL S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR-TQTLATIGYMAPDEI 900
H D+ NVL+ L DFG+++ + ED + + ++ I +MAP+ I
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESI 564
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEIFVG 903
+ T Y AP E+ +G
Sbjct: 184 PYVVTRYYRAP-EVILG 199
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 731 NNIIGIGGFGSVYRA-RLEDG-------VEIAIKVFHPQCASTLKSFEAECEVIKNIRHR 782
N +G G F +++ R E G E+ +KV + +SF ++ + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+LV C D LV E++ GSL+ L + +NI +L + +A+A +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 843 HSTPIIHCDLKPSNVLL--DED 862
+IH ++ N+LL +ED
Sbjct: 130 EENTLIHGNVCAKNILLIREED 151
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 102 LDLSHNKLSSNIPSSIF-TMSTLKVLYLMDNQLSGSLSSFTFNT-SSILDIRLSKNKLSG 159
LDL N L S +P+ +F +++L LYL N+L SL + FN +S+ + LS N+L
Sbjct: 33 LDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ- 89
Query: 160 KLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTV 219
LP + + L LK L L N K QL++L L N L LT
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149
Query: 220 LQRISLINNKLHGEIP 235
LQ I L +N P
Sbjct: 150 LQYIWLHDNPWDCTCP 165
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 75 VTTLNLSSFNLQGTIPPEIAN-LSSLKSLDLSHNKLSSNIPSSIF-TMSTLKVLYLMDNQ 132
+T L L LQ ++P + N L+SL L+LS N+L S +P+ +F ++ LK L L NQ
Sbjct: 54 LTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNTNQ 111
Query: 133 LSGSLSSFTFNT-SSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIP 187
L SL F+ + + D+RL +N+L +P+ + + L L++++L +N + P
Sbjct: 112 LQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 527 GPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTS 586
G S+ G +DL N+L + L SL + L N+L+ F +TS
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77
Query: 587 LESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRG 628
L L+LS N++ F+KL+ LKEL L+ N+L+ +P G
Sbjct: 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDG 118
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 106 HNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNT-SSILDIRLSKNKLSGKLPEN 164
+++ +++P+ I +T L L N L SL + F+ +S+ + L NKL LP
Sbjct: 15 YSQGRTSVPTGIPAQTT--YLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQ-SLPNG 70
Query: 165 ICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRIS 224
+ N L L +L L N K QL+EL L N L LT L+ +
Sbjct: 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130
Query: 225 LINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNNSLSGSLP 283
L N+L VP +F+ +++L+ I+L++N
Sbjct: 131 LYQNQLKS-------------------------VPDGVFDRLTSLQYIWLHDNPW----- 160
Query: 284 SRIDLALPNLEFLNLGINSFSGTIPSS 310
D P + +L+ IN SG + +S
Sbjct: 161 ---DCTCPGIRYLSEWINKHSGVVRNS 184
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 446 LDLAFNKLAGSIPDEIC-LLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFV 504
LDL N L S+P+ + L+ L +L L GNK+ + LTSL YLNL +N+ +
Sbjct: 33 LDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 505 IPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQ 564
F L + +++N L L + + L +N L + L SLQ
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151
Query: 565 NISLAYNRLEGPIP 578
I L N + P
Sbjct: 152 YIWLHDNPWDCTCP 165
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 234 IPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNL 293
IP + YL L N+L + +++L +++L N L SLP+ + L +L
Sbjct: 26 IPAQTTYLD------LETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSL 78
Query: 294 EFLNLGINSFSGTIPSSITNA-SKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLT 352
+LNL N ++P+ + + ++L L + +N L LK ++ N L
Sbjct: 79 TYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL- 136
Query: 353 SSTPELGFLSSLANCKKLRYLGLGGNPLDGFLP 385
S P+ G L + L+Y+ L NP D P
Sbjct: 137 KSVPD-GVFDRLTS---LQYIWLHDNPWDCTCP 165
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 372 YLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGN-LSNLIVLSLGGNNLS 430
YL L N L LP+ + + SL +L + N ++P + N L++L L+L N L
Sbjct: 32 YLDLETNSLKS-LPNGVFDELTSLTQLYLGG-NKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89
Query: 431 GSIPVTFGGLQKLQGLDLAFNKLAGSIPDEIC-LLSRLNELDLNGNKISGSISSCLGNLT 489
F L +L+ L L N+L S+PD + L++L +L L N++ LT
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148
Query: 490 SLQYLNLGSNRFTFVIP 506
SLQY+ L N + P
Sbjct: 149 SLQYIWLHDNPWDCTCP 165
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
LDL N + + LTSL L LG N+ + F L + ++S+N L
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLP 92
Query: 530 SLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPES-FGNMTSLE 588
+ L + + L+ N L + L L+++ L N+L+ +P+ F +TSL+
Sbjct: 93 NGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQ 151
Query: 589 SLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEI 625
+ L +N + P + YL E NK G +
Sbjct: 152 YIWLHDNPWDCTCP----GIRYLSEW---INKHSGVV 181
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 560 LKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFN 619
L SL ++L+ N+L+ F +T L+ L L+ N++ F+KL+ LK+L L N
Sbjct: 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQN 134
Query: 620 KLKGEIPRG 628
+LK +P G
Sbjct: 135 QLK-SVPDG 142
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 157 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 214 LPLKWMAPETIF 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 203 LPLKWMAPETIF 214
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 212 LPLKWMAPETIF 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 734 IGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLV 785
+G G FG V A + +A+K+ S ++ +E +++ +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 786 KIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL-----------NIFCRLNIMI--- 830
++ +C+ +V+ E+ G+L L S F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 831 -DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
+A +E+L S IH DL N+LL E V + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 890 ATIGYMAPDEIF 901
+ +MAP+ IF
Sbjct: 203 LPLKWMAPETIF 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 763 ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL---EDCL----HS 815
S F+ E ++I +I++ + +N D ++ EYM N S+ ++ +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 816 SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875
C + I I+ + ++ Y+H + I H D+KPSN+L+D++ LSDFG ++
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELS 906
+ + R T +M P E F E S
Sbjct: 202 MVDKKIKGSR----GTYEFMPP-EFFSNESS 227
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 27/140 (19%)
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCA------LNIFCRLNIMIDIAS 834
H N+++ S + D F + LE + N +L+D + S N + + ++++ IAS
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 835 ALEYLHFGHSTPIIHCDLKPSNVLLD-------------EDMVAHLSDFGMAKLLSGEDE 881
+ +LH S IIH DLKP N+L+ E++ +SDFG+ K L +
Sbjct: 127 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQ 182
Query: 882 STMRT---QTLATIGYMAPD 898
S+ RT T G+ AP+
Sbjct: 183 SSFRTNLNNPSGTSGWRAPE 202
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+LE ++ G L D L + +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMA 873
L HS I H DLKP N++L + V + DFG+A
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 726 DNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNL 784
D++ +G G + V+ A + + ++ +K+ P + +K E ++++N+R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 785 VKIISSCSNDDFK---ALVLEYMSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLH 840
+ ++ D ALV E+++N + + ++ + + M +I AL+Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-----MYEILKALDYCH 148
Query: 841 FGHSTPIIHCDLKPSNVLLD-EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893
S I+H D+KP NV++D E L D+G+A+ E +R + G
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 830 IDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889
I +A+ H + IIH D+KPSN+LLD L DFG++ L +S +T+
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDA 186
Query: 890 ATIGYMAPDEI 900
YMAP+ I
Sbjct: 187 GCRPYMAPERI 197
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 832 IASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLAT 891
+A +E+L S IH DL N+LL E+ V + DFG+A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 892 IGYMAPDEIFVGELSLKR--WVNDLL----------PVSLVEVVDKSLLS--GEEKHFAA 937
+ +MAP+ IF S K W +L P V+ +D+ S E A
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQ-MDEDFCSRLREGMRMRA 323
Query: 938 KEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970
E I+ + L+C P++R + + +L
Sbjct: 324 PEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 415 NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNG 474
NL NL L L N +S P F L KL+ L L+ N+L +P++ + L EL ++
Sbjct: 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEK--MPKTLQELRVHE 130
Query: 475 NKISGSISSCLGNLTSLQYLNLGSN--RFTFVIPSTFWNLKDILSFDIS-SNLLDGPISL 531
N+I+ S L + + LG+N + + + F +K + I+ +N+ P L
Sbjct: 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL 190
Query: 532 AIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLD 591
++ + L N ++ +L+GL +L + L++N + S N L L
Sbjct: 191 P----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246
Query: 592 LSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
L+NNK+ +P Y++ + L N +
Sbjct: 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 69 DVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYL 128
D+ ++K+T + F NL +L +L L +NK+S P + + L+ LYL
Sbjct: 58 DLQNNKITEIKDGDF----------KNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107
Query: 129 MDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFY--GKI 186
NQL ++ ++R+ +N+++ K+ +++ N L + + L N G
Sbjct: 108 SKNQLKELPEKMP---KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIE 163
Query: 187 PSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDV 246
+ K+L + + N++ IP+ G L + L NK+ + L NL
Sbjct: 164 NGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAK 220
Query: 247 LQLGFNNLTGVVPATIFNMSTLKEIFLYNNSL 278
L L FN+++ V ++ N L+E+ L NN L
Sbjct: 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 62/300 (20%)
Query: 210 IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLK 269
+PK++ T L + L NNK+ + L+NL L L N ++ + P + L+
Sbjct: 46 VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 270 EIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSG 329
++L N L LP ++ L + L + N + S +++I++E+G+N
Sbjct: 104 RLYLSKNQLK-ELPEKMPKTL---QELRVHENEITKVRKSVFNGLNQMIVVELGTNP--- 156
Query: 330 FIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIG 389
L SS E G + KKL Y+
Sbjct: 157 ---------------------LKSSGIENGAFQGM---KKLSYI---------------- 176
Query: 390 NLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLA 449
IA NI+ IP+ + +L L L GN ++ + GL L L L+
Sbjct: 177 ---------RIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 224
Query: 450 FNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTF 509
FN ++ + L EL LN NK+ + L + +Q + L +N + + + F
Sbjct: 225 FNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 581 FGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGP 630
F N+ +L +L L NNKIS P +F L L+ L LS N+LK E+P P
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP 120
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 440 LQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKIS--GSISSCLGNLTSLQYLNLG 497
L+ L+ L NK G+ E+ L S L LDL+ N +S G S SL+YL+L
Sbjct: 348 LKSLKRLTFTSNK-GGNAFSEVDLPS-LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLS 405
Query: 498 SNRFTFVIPSTFWNLKDILSFDIS-SNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTT 556
N + S F L+ + D SNL +L+ ++ +D+S +
Sbjct: 406 FNG-VITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 464
Query: 557 LEGLKSLQNISLAYNRL-EGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELN 615
GL SL+ + +A N E +P+ F + +L LDLS ++ P +F LS L+ LN
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 616 LSFN 619
+S N
Sbjct: 525 MSHN 528
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 37 QCMELNFYK----IPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 90
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPI-SLAIG------NLKAVVGIDLSRNNLSGNIPTT 556
+ + +L + + ++ N PI SLA+G +L+ +V ++ + +L N P
Sbjct: 91 IEDGAYQSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP-- 143
Query: 557 LEGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKISG 599
+ LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 242 QNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGIN 301
Q+L+++ F G P + +LK + +N G+ S +DL P+LEFL+L N
Sbjct: 331 QHLELVNCKF----GQFPT--LKLKSLKRLTFTSNK-GGNAFSEVDL--PSLEFLDLSRN 381
Query: 302 --SFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIG------------NLRNLKLFDIF 347
SF G S L L++ N + +G NL+ + F +F
Sbjct: 382 GLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 441
Query: 348 FN-------NLTSSTPELGFLSSLANCKKLRYLGLGGNPL-DGFLPSSIGNLSLSLERLN 399
+ +++ + + F L L + GN + FLP L +L L+
Sbjct: 442 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLD 500
Query: 400 IAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPD 459
++ C + P A +LS+L VL++ NN + L LQ LD + N + S
Sbjct: 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 560
Query: 460 EI 461
E+
Sbjct: 561 EL 562
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 367 CKKLRYLGLGGNPLDGFLPSSIGNLSLS-----------------LERLNIAFCNISGNI 409
C +L + + N LP S NL LS L+ L+++ C I
Sbjct: 38 CMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE 92
Query: 410 PKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNE 469
A +LS+L L L GN + F GL LQ L LA I L L E
Sbjct: 93 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 152
Query: 470 LDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
L++ N I S + NLT+L++L+L SN+
Sbjct: 153 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 370 LRYLGLGGNPLDGFLPSSIGNLSL-SLERLNIAFCNISGNIPKAIG-NLSNLIVLSLGGN 427
L+YL L N G + S L L LE L+ N+ ++ +L NLI L +
Sbjct: 399 LKYLDLSFN---GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 455
Query: 428 NLSGSIPVTFGGLQKLQGLDLAFNKLAGS-IPDEICLLSRLNELDLNGNKISGSISSCLG 486
+ + F GL L+ L +A N + +PD L L LDL+ ++ +
Sbjct: 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 515
Query: 487 NLTSLQYLNLGSNRF 501
+L+SLQ LN+ N F
Sbjct: 516 SLSSLQVLNMSHNNF 530
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 437 FGGLQKLQGLDLAFNKLAGSIPDEICL-LSRLNELDLNGNKISGSISSCLGNLTSLQYLN 495
F GL++L+ LD + L + L L L LD++ + + L+SL+ L
Sbjct: 416 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 475
Query: 496 LGSNRFTF-VIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIP 554
+ N F +P F L+++ D+S L+ A +L ++ +++S NN
Sbjct: 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 535
Query: 555 TTLEGLKSLQNISLAYNRLEGPIPESFGNM-TSLESLDLSNNKIS 598
+ L SLQ + + N + + + +SL L+L+ N +
Sbjct: 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 241 LQNLDVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLG 299
L+NL L + + T V IFN +S+L+ + + NS + I L NL FL+L
Sbjct: 444 LRNLIYLDISHTH-TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502
Query: 300 INSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNN-LTSSTPEL 358
P++ + S L +L M N+F L +L++ D N+ +TS EL
Sbjct: 503 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 562
Query: 359 G-FLSSLA 365
F SSLA
Sbjct: 563 QHFPSSLA 570
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 415 NLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNG 474
NL NL L L N +S P F L KL+ L L+ N+L +P++ + L EL ++
Sbjct: 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEK--MPKTLQELRVHE 130
Query: 475 NKISGSISSCLGNLTSLQYLNLGSN--RFTFVIPSTFWNLKDILSFDIS-SNLLDGPISL 531
N+I+ S L + + LG+N + + + F +K + I+ +N+ P L
Sbjct: 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL 190
Query: 532 AIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLD 591
++ + L N ++ +L+GL +L + L++N + S N L L
Sbjct: 191 P----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246
Query: 592 LSNNKISGSIPVSFEKLSYLKELNLSFNKL 621
L+NNK+ +P Y++ + L N +
Sbjct: 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 69 DVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYL 128
D+ ++K+T + F NL +L +L L +NK+S P + + L+ LYL
Sbjct: 58 DLQNNKITEIKDGDF----------KNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107
Query: 129 MDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFY--GKI 186
NQL ++ ++R+ +N+++ K+ +++ N L + + L N G
Sbjct: 108 SKNQLKELPEKMP---KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIE 163
Query: 187 PSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDV 246
+ K+L + + N++ IP+ G L + L NK+ + L NL
Sbjct: 164 NGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAK 220
Query: 247 LQLGFNNLTGVVPATIFNMSTLKEIFLYNNSL 278
L L FN+++ V ++ N L+E+ L NN L
Sbjct: 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 62/300 (20%)
Query: 210 IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLK 269
+PK++ T L + L NNK+ + L+NL L L N ++ + P + L+
Sbjct: 46 VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 270 EIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSG 329
++L N L LP ++ L + L + N + S +++I++E+G+N
Sbjct: 104 RLYLSKNQLK-ELPEKMPKTL---QELRVHENEITKVRKSVFNGLNQMIVVELGTNP--- 156
Query: 330 FIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIG 389
L SS E G + KKL Y+
Sbjct: 157 ---------------------LKSSGIENGAFQGM---KKLSYI---------------- 176
Query: 390 NLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLA 449
IA NI+ IP+ + +L L L GN ++ + GL L L L+
Sbjct: 177 ---------RIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 224
Query: 450 FNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTF 509
FN ++ + L EL LN NK+ + L + +Q + L +N + + + F
Sbjct: 225 FNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 581 FGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGP 630
F N+ +L +L L NNKIS P +F L L+ L LS N+LK E+P P
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP 120
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 728 FAENNIIGIGGFGSVY--RARLEDGVE--IAIKVFHPQCASTLKSFEAECEVIKNIRHRN 783
F + IG G F SVY A+L+ G E IA+K P + E +C + + N
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQD-N 81
Query: 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH-FG 842
++ + +D + + Y+ + S D L+S L+ M+++ AL+ +H FG
Sbjct: 82 VMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIHQFG 137
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAH-LSDFGMAK 874
I+H D+KPSN L + + + L DFG+A+
Sbjct: 138 ----IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 77 TLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGS 136
TL+LS LQ ++P L +L LD+S N+L+S ++ + L+ LYL N+L
Sbjct: 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 137 LSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFY 183
T + + L+ N+L+ +LP + N L L L L+EN Y
Sbjct: 140 PPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 89 IPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSIL 148
+PP++ +++ L LS N L + +++ + L L L +L+ T L
Sbjct: 25 LPPDLPKDTTI--LHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTL 82
Query: 149 DIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSG 208
D LS N+L LP + L L L + N +L +LQEL+L N L
Sbjct: 83 D--LSHNQLQ-SLPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 209 AIPKEIGNLTVLQRISLINNKLHGEIPQE-IGYLQNLDVLQLGFNNLTGVVPATIFNMST 267
P + L+++SL NN+L E+P + L+NLD L L N+L +P F
Sbjct: 139 LPPGLLTPTPKLEKLSLANNQL-TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHL 196
Query: 268 LKEIFLYNN 276
L FL+ N
Sbjct: 197 LPFAFLHGN 205
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 395 LERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLA 454
L +LN+ C ++ + G L L L L N L S+P+ L L LD++FN+L
Sbjct: 57 LTQLNLDRCELTK--LQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT 113
Query: 455 GSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFT 502
+ L L EL L GN++ L L+ L+L +N+ T
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A LE V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVVAAYDAILERNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIIS----SCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++K + H+N++ +++ S ++F+ +V+E M + +L + L+
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMS 129
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 18/179 (10%)
Query: 718 YFELLR---ATDNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFHPQCASTL--KSFEA 771
YF+ ++ DN+ ++IG G +G VY A ++ + +AIK + + K
Sbjct: 15 YFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR 74
Query: 772 ECEVIKNIRHRNLVKIISSCSNDD---FKAL--VLEYMSNGSLEDCLHSSNCALNIF-CR 825
E ++ ++ ++++ DD F L VLE +++ L+ + IF
Sbjct: 75 EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTP-----IFLTE 128
Query: 826 LNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884
+I + + L +F H + IIH DLKP+N LL++D + DFG+A+ ++ E ++ +
Sbjct: 129 EHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 15 QCMELNFYK----IPDNLPFSTK--NLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQT 68
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPISLAIG------NLKAVVGIDLSRNNLSGNIPTTL 557
+ + +L + + ++ N + SLA+G +L+ +V ++ + +L N P +
Sbjct: 69 IEDGAYQSLSHLSTLILTGNPIQ---SLALGAFSGLSSLQKLVAVETNLASLE-NFP--I 122
Query: 558 EGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKI 597
LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 123 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 350 NLTSSTPELGFLSSLANCK-KLRYLGLGGNPLDGFLPSSIGNLSL----SLERLNIAFCN 404
N+T EL F N + L L NPL +G+ S L+ L+++ C
Sbjct: 11 NITYQCMELNFYKIPDNLPFSTKNLDLSWNPL-----RHLGSYSFFSFPELQVLDLSRCE 65
Query: 405 ISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLL 464
I A +LS+L L L GN + F GL LQ L LA I L
Sbjct: 66 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 125
Query: 465 SRLNELDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
L EL++ N I S + NLT+L++L+L SN+
Sbjct: 126 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 162
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 14 QCMELNFYK----IPDNLPFSTK--NLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQT 67
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPISLAIG------NLKAVVGIDLSRNNLSGNIPTTL 557
+ + +L + + ++ N + SLA+G +L+ +V ++ + +L N P +
Sbjct: 68 IEDGAYQSLSHLSTLILTGNPIQ---SLALGAFSGLSSLQKLVAVETNLASLE-NFP--I 121
Query: 558 EGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKI 597
LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 122 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 350 NLTSSTPELGFLSSLANCK-KLRYLGLGGNPLDGFLPSSIGNLSL----SLERLNIAFCN 404
N+T EL F N + L L NPL +G+ S L+ L+++ C
Sbjct: 10 NITYQCMELNFYKIPDNLPFSTKNLDLSWNPL-----RHLGSYSFFSFPELQVLDLSRCE 64
Query: 405 ISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLL 464
I A +LS+L L L GN + F GL LQ L LA I L
Sbjct: 65 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 124
Query: 465 SRLNELDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
L EL++ N I S + NLT+L++L+L SN+
Sbjct: 125 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 161
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 783 NLVKIISSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N++K+I + + K ALV EY++N + I +I + L+ L
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY-------QILTDFDIRFYMYELLKALD 151
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVA-HLSDFGMAKLLSGEDESTMRT 886
+ HS I+H D+KP NV++D L D+G+A+ E +R
Sbjct: 152 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 198
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 783 NLVKIISSCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
N++K+I + + K ALV EY++N + I +I + L+ L
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY-------QILTDFDIRFYMYELLKALD 146
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVA-HLSDFGMAKLLSGEDESTMRT 886
+ HS I+H D+KP NV++D L D+G+A+ E +R
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 193
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 130/347 (37%), Gaps = 51/347 (14%)
Query: 290 LPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAI--GNLRNLKLF--- 344
LPNL L+LG + P + L L + F G + + G RNLK
Sbjct: 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRL---YFCGLSDAVLKDGYFRNLKALTRL 128
Query: 345 DIFFNNLTSST--PELGFLSSLANC--------------------KKLRYLGLGGNPLDG 382
D+ N + S P G L+SL + K L + L N L
Sbjct: 129 DLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYS 188
Query: 383 FLPSSIGNLSLSLERLNIAFCNISGN--IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGL 440
+ G + + ++SGN GN SN I S S +
Sbjct: 189 RVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAI---------SKSQAFSLILA 239
Query: 441 QKLQGLDLAFNKLAGSIPDEICLLSR--LNELDLNGNKISGSISSCLGNLTSLQYLNLGS 498
+ G F+ + + L+R + LDL+ + S L L+ LNL
Sbjct: 240 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAY 299
Query: 499 NRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558
N+ + F+ L ++ ++S NLL S L V IDL +N+++ T +
Sbjct: 300 NKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359
Query: 559 GLKSLQNISLAYNRLEG-----PIPESF--GN-MTSLESLDLSNNKI 597
L+ LQ + L N L IP+ F GN + +L ++L+ N I
Sbjct: 360 FLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLI 406
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 579 ESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTA 636
E+F N+ +L LDL ++KI P +F+ L +L EL L F L + + G F N A
Sbjct: 67 EAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 708 SSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRA--RLEDGVEIAIK----VFHP- 760
SS+PT + D + ++IG G +G V A +LE V +AIK VF
Sbjct: 35 SSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRV-VAIKKILRVFEDL 93
Query: 761 -QCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA-----LVLEYMSNGSLEDCLH 814
C L+ E ++ + H ++VK++ D + +VLE +++ +
Sbjct: 94 IDCKRILR----EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFR 148
Query: 815 SSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874
+ L+I + + L + + HS I+H DLKP+N L+++D + DFG+A+
Sbjct: 149 TPV----YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
Query: 875 LLS 877
+
Sbjct: 205 TVD 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 734 IGIGGFGSVYRARLEDGVE------IAIKVFHPQCASTLK-SFEAECEVIKNIRHRNLVK 786
+G G FG VY D ++ +A+K + + + F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISSCSNDDFKALVLEYMSNGSLEDCLHS-----SNCALNIFCRLNIMI----DIASALE 837
++ S +V+E M++G L+ L S N L MI +IA +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAP 897
YL+ + +H DL N ++ D + DFGM + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 898 DEI 900
+ +
Sbjct: 202 ESL 204
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 771 AECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
AE V++ + + +V++I C + + LV+E G L L N + + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 476
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
++ ++YL + +H DL NVLL A +SDFG++K L DE+ + QT
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 532
Query: 891 T--IGYMAPD 898
+ + AP+
Sbjct: 533 KWPVKWYAPE 542
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 13 QCMELNFYK----IPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPISLAIG------NLKAVVGIDLSRNNLSGNIPTTL 557
+ + +L + + ++ N + SLA+G +L+ +V ++ + +L N P +
Sbjct: 67 IEDGAYQSLSHLSTLILTGNPIQ---SLALGAFSGLSSLQKLVAVETNLASLE-NFP--I 120
Query: 558 EGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKISG 599
LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 366 NCKKLRYLGLGGNPLDGFLPSSIGNLSLS-----------------LERLNIAFCNISGN 408
C +L + + N LP S NL LS L+ L+++ C I
Sbjct: 13 QCMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI 67
Query: 409 IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLN 468
A +LS+L L L GN + F GL LQ L LA I L L
Sbjct: 68 EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127
Query: 469 ELDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
EL++ N I S + NLT+L++L+L SN+
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 771 AECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMI 830
AE V++ + + +V++I C + + LV+E G L L N + + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 477
Query: 831 DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890
++ ++YL + +H DL NVLL A +SDFG++K L DE+ + QT
Sbjct: 478 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 533
Query: 891 T--IGYMAPD 898
+ + AP+
Sbjct: 534 KWPVKWYAPE 543
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A LE V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIIS----SCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++K + H+N++ +++ S ++F+ +V+E M + +L + L+
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMS 129
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 25/198 (12%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRARLEDGVE-IAIKVFH--PQCASTLKSFEAECEVI- 776
++ +D + IG G FG R + E +A+K + A+ +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKR-----EIIN 68
Query: 777 -KNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA 835
+++RH N+V+ A+V+EY S G L + + C F
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQL 124
Query: 836 LEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLS--DFGMAKLLSGEDESTMRTQTLATIG 893
+ + + H+ + H DLK N LLD L DFG +K S + +Q +T+G
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVG 178
Query: 894 ---YMAPDEIFVGELSLK 908
Y+AP+ + E K
Sbjct: 179 TPAYIAPEVLLKKEYDGK 196
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
I + I ALE+LH S +IH D+KPSNVL++ + DFG++ L +S +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 887 QTLATIGYMAPDEI 900
YMAP+ I
Sbjct: 212 IDAGCKPYMAPERI 225
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 21/162 (12%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 13 QCMELNFYK----IPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPI-SLAIG------NLKAVVGIDLSRNNLSGNIPTT 556
+ + +L + + ++ N PI SLA+G +L+ +V ++ + +L N P
Sbjct: 67 IEDGAYQSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP-- 119
Query: 557 LEGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKI 597
+ LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 171/441 (38%), Gaps = 58/441 (13%)
Query: 194 KQLQELHLGYNNL-SGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFN 252
K L+EL++ +N + S +P+ NLT L+ + L +NK+ ++ L + +L L
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS-- 181
Query: 253 NLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSIT 312
+ P KEI L+ +L + S L + I +G
Sbjct: 182 LDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDS--------LNVMKTCIQGLAG------L 227
Query: 313 NASKLILLEM-GSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPE-LGFLSSLANCKKL 370
+L+L E + F SA+ L NL + + L + + + L N
Sbjct: 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSF 287
Query: 371 RYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPK-AIGNLSNLIVLSLGGNNL 429
+ + + F + + + L + C G P + +L L S G N
Sbjct: 288 SLVSVTIERVKDF------SYNFGWQHLELVNCKF-GQFPTLKLKSLKRLTFTSNKGGNA 340
Query: 430 SGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLT 489
+ L L+ LDL+ N L+ G S T
Sbjct: 341 FSEV-----DLPSLEFLDLSRNGLS----------------------FKGCCSQSDFGTT 373
Query: 490 SLQYLNLGSNRFTFVIPSTFWNLKDILSFDIS-SNLLDGPISLAIGNLKAVVGIDLSRNN 548
SL+YL+L N + S F L+ + D SNL +L+ ++ +D+S +
Sbjct: 374 SLKYLDLSFNG-VITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432
Query: 549 LSGNIPTTLEGLKSLQNISLAYNRL-EGPIPESFGNMTSLESLDLSNNKISGSIPVSFEK 607
GL SL+ + +A N E +P+ F + +L LDLS ++ P +F
Sbjct: 433 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 492
Query: 608 LSYLKELNLSFNKLKGEIPRG 628
LS L+ LN++ N+LK +P G
Sbjct: 493 LSSLQVLNMASNQLKS-VPDG 512
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 12/241 (4%)
Query: 394 SLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLS--GSIPVTFGGLQKLQGLDLAFN 451
SL+RL N GN + +L +L L L N LS G + G L+ LDL+FN
Sbjct: 326 SLKRLTFT-SNKGGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383
Query: 452 KLAGSIPDEICLLSRLNELDLNGNKISG-SISSCLGNLTSLQYLNLGSNRFTFVIPSTFW 510
+ ++ L +L LD + + S S +L +L YL++ F
Sbjct: 384 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 442
Query: 511 NLKDILSFDISSN-LLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLA 569
L + ++ N + + L+ + +DLS+ L PT L SLQ +++A
Sbjct: 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502
Query: 570 YNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYL-KELNLSFNKLKGEIPRG 628
N+L+ F +TSL+ + L N S P ++ YL + LN + K +G
Sbjct: 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP----RIDYLSRWLNKNSQKEQGSAKCS 558
Query: 629 G 629
G
Sbjct: 559 G 559
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 350 NLTSSTPELGFLSSLANCK-KLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGN 408
N+T EL F N + L L NPL S + L+ L+++ C I
Sbjct: 9 NITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFP-ELQVLDLSRCEIQTI 67
Query: 409 IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLN 468
A +LS+L L L GN + F GL LQ L LA I L L
Sbjct: 68 EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127
Query: 469 ELDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
EL++ N I S + NLT+L++L+L SN+
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 82 SFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFT 141
SFN T+ L L+ LD H+ L S+F +S ++YL +S + +
Sbjct: 381 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVF-LSLRNLIYL---DISHTHTRVA 436
Query: 142 FN-----TSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQL 196
FN SS+ ++++ N +I LR L L L + P++ + L
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 197 QELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYL 241
Q L++ N L LT LQ+I L N P+ I YL
Sbjct: 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR-IDYL 540
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 48 NLLGTNWTSNASICSWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHN 107
NL+ + + + ++ GI ++S +V + +SF + +P L +L LDLS
Sbjct: 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ-ENFLPDIFTELRNLTFLDLSQC 480
Query: 108 KLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPE 163
+L P++ ++S+L+VL + NQL +S+ I L N P
Sbjct: 481 QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSVYRA------RLEDGVEIAIKVFHPQCA-STLKSF 769
S +E R D +G G FG V A + +A+K+ S ++
Sbjct: 57 SKWEFPR--DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 114
Query: 770 EAECEVIKNIRHR-NLVKIISSCSNDDFKALVL-EYMSNGSLEDCLHSSNCAL------- 820
+E +++ +I H N+V ++ +C+ +V+ E+ G+L L S
Sbjct: 115 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 174
Query: 821 ----NIFCRLNIMI----DIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872
F L +I +A +E+L S IH DL N+LL E V + DFG+
Sbjct: 175 EDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 873 AKLLSGEDESTMRTQTLATIGYMAPDEIF 901
A+ + + + + + +MAP+ IF
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIF 260
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 731 NNIIGIGGFGSVYRA-RLEDG-------VEIAIKVFHPQCASTLKSFEAECEVIKNIRHR 782
N +G G F +++ R E G E+ +KV + +SF ++ + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 783 NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
+LV C D LV E++ GSL+ L + +NI +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 843 HSTPIIHCDLKPSNVLL--DED 862
+IH ++ N+LL +ED
Sbjct: 130 EENTLIHGNVCAKNILLIREED 151
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A LE V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIIS----SCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++K + H+N++ +++ S ++F+ +V+E M + +L + L+
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMS 129
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAE----C 773
+E +G G FG V+R + + G + A+K L+ F E C
Sbjct: 51 YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVAC 104
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
+ + R +V + + + + +E + GSL + C + +
Sbjct: 105 AGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC----LPEDRALYYLG 157
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMA 873
ALE L + H+ I+H D+K NVLL D A L DFG A
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 11 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 66
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMS 122
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 123 YLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMT 176
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 177 PYVVTRYYRAPEVI 190
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 15/189 (7%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR 780
++ +D + IG G FG R + E+ + + ++ + E +++R
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+V+ A+V+EY S G L + + C F + +
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVS 129
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHL--SDFGMAKLLSGEDESTMRTQTLATIG---YM 895
+ H+ + H DLK N LLD L +DFG +K S + +Q + +G Y+
Sbjct: 130 YAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK------ASVLHSQPKSAVGTPAYI 183
Query: 896 APDEIFVGE 904
AP+ + E
Sbjct: 184 APEVLLKKE 192
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEIFVG 903
+ T Y AP E+ +G
Sbjct: 184 PYVVTRYYRAP-EVILG 199
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 15/184 (8%)
Query: 726 DNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKV-----FHPQCASTLKSFEAECEVIKNI 779
D + +IG G F V R E G + A+K+ F + + + E + +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 780 RHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMID--IASALE 837
+H ++V+++ + S+D +V E+M L C A F + + LE
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 838 YLHFGHSTPIIHCDLKPSNVLL---DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894
L + H IIH D+KP VLL + L FG+A L + + + T +
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHF 199
Query: 895 MAPD 898
MAP+
Sbjct: 200 MAPE 203
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 133/312 (42%), Gaps = 45/312 (14%)
Query: 691 ALKRGKRGTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDG 750
AL+R K + + ++P + +L R ++F +IG G FG V ++++
Sbjct: 61 ALRRDK----YVAEFLEWAKPFTQLVKEMQLHR--EDFEIIKVIGRGAFGEVAVVKMKNT 114
Query: 751 VEI-AIKVFHPQCASTLKSFEAEC-----EVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804
I A+K+ + LK E C +V+ N + + + + +++ LV++Y
Sbjct: 115 ERIYAMKILNKW--EMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 172
Query: 805 SNGSL-------EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNV 857
G L ED L + A + + ID L Y +H D+KP NV
Sbjct: 173 VGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNV 222
Query: 858 LLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPV 917
LLD + L+DFG L +D + + + T Y++P+ + E + ++ +
Sbjct: 223 LLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
Query: 918 SLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL--ECTMESPEKRID----AKDTITRLL 971
SL V +L GE +A + L+ + + E + P D AKD I RL+
Sbjct: 282 SL-GVCMYEMLYGETPFYA---ESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
Query: 972 KIRDTLSKRIGN 983
R+ +R+G
Sbjct: 338 CSRE---RRLGQ 346
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAE----C 773
+E +G G FG V+R + + G + A+K L+ F E C
Sbjct: 67 YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVAC 120
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
+ + R +V + + + + +E + GSL + C + +
Sbjct: 121 AGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC----LPEDRALYYLG 173
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMA 873
ALE L + H+ I+H D+K NVLL D A L DFG A
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A LE V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIIS----SCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++K + H+N++ +++ S ++F+ +V+E M + +L + L+
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMS 129
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 544 LSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPES-FGNMTSLESLDLSNNKISGSIP 602
L N ++ P + L +L+ + L N+L G +P F ++T L LDL N+++
Sbjct: 47 LHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPS 105
Query: 603 VSFEKLSYLKELNLSFNKLKGEIPRG 628
F++L +LKEL + NKL E+PRG
Sbjct: 106 AVFDRLVHLKELFMCCNKLT-ELPRG 130
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 59 SICSWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIF 118
S CS G D S + ++P I ++ + L L N+++ P
Sbjct: 15 SQCSCSGTTVDCRSKR-----------HASVPAGIP--TNAQILYLHDNQITKLEPGVFD 61
Query: 119 TMSTLKVLYLMDNQLSGSLSSFTFNTSSILDI-RLSKNKLSGKLPENICNHLRYLKHLFL 177
++ LK LYL NQL G+L F++ + L + L N+L+ LP + + L +LK LF+
Sbjct: 62 SLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFM 119
Query: 178 RENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQE 237
N ++P + + L L L N L L+ L L N E ++
Sbjct: 120 CCNKL-TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC-RD 177
Query: 238 IGYLQN 243
I YL+N
Sbjct: 178 IMYLRN 183
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 305 GTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSL 364
++P+ I ++++ L N + P +L NLK + N L + P +G SL
Sbjct: 32 ASVPAGIPTNAQILYLH--DNQITKLEPGVFDSLINLKELYLGSNQL-GALP-VGVFDSL 87
Query: 365 ANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSL 424
+L L LG N L LPS++ + + L+ L + CN +P+ I L++L L+L
Sbjct: 88 T---QLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMC-CNKLTELPRGIERLTHLTHLAL 142
Query: 425 GGNNLSGSIPVTFGGLQKLQGLDLAF 450
N L SIP G +L L A+
Sbjct: 143 DQNQLK-SIP--HGAFDRLSSLTHAY 165
Score = 37.4 bits (85), Expect = 0.045, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 36/148 (24%)
Query: 175 LFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEI 234
L+L +N P L+EL+LG N L GA+P +
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV-------------------- 83
Query: 235 PQEIGYLQNLDVLQLGFNNLTGVVPATIFN-MSTLKEIFLYNNSLSGSLPSRIDLALPNL 293
L L VL LG N LT V+P+ +F+ + LKE+F+ N L+ LP I+ L +L
Sbjct: 84 ---FDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIE-RLTHL 137
Query: 294 EFLNLGINSFSGTIP-------SSITNA 314
L L N +IP SS+T+A
Sbjct: 138 THLALDQNQLK-SIPHGAFDRLSSLTHA 164
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 489 TSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNN 548
T+ Q L L N+ T + P F +L ++ + SN L +L + +DL N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99
Query: 549 LSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPV-SFEK 607
L+ + L L+ + + N+L +P +T L L L N++ SIP +F++
Sbjct: 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDR 157
Query: 608 LSYL 611
LS L
Sbjct: 158 LSSL 161
Score = 33.9 bits (76), Expect = 0.49, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 410 PKAIGNLSNLIVLSLGGNNLSGSIPV-TFGGLQKLQGLDLAFNKLAGSIPDEIC-LLSRL 467
P +L NL L LG N L G++PV F L +L LDL N+L +P + L L
Sbjct: 57 PGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHL 114
Query: 468 NELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDI 515
EL + NK++ + + LT L +L L N+ + F L +
Sbjct: 115 KELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 470 LDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPI 529
L L+ N+I+ +L +L+ L LGSN+ + F +L + D+ +N L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLP 104
Query: 530 SLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLES 589
S L + + + N L+ +P +E L L +++L N+L+ +F ++SL
Sbjct: 105 SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163
Query: 590 LDLSNN 595
L N
Sbjct: 164 AYLFGN 169
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 258 VPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNA-SK 316
VPA I + + ++L++N ++ P D +L NL+ L LG N G +P + ++ ++
Sbjct: 34 VPAGIPTNAQI--LYLHDNQITKLEPGVFD-SLINLKELYLGSNQL-GALPVGVFDSLTQ 89
Query: 317 LILLEMGSNSFSGFIPSAI-GNLRNLKLFDIFFNNLT 352
L +L++G+N + +PSA+ L +LK + N LT
Sbjct: 90 LTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT 125
Score = 30.0 bits (66), Expect = 6.7, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 417 SNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEIC-LLSRLNELDLNGN 475
+N +L L N ++ P F L L+ L L N+L G++P + L++L LDL N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTN 98
Query: 476 KISGSISSCLGNLTSLQYLNLGSNRFT 502
+++ S+ L L+ L + N+ T
Sbjct: 99 QLTVLPSAVFDRLVHLKELFMCCNKLT 125
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 133/312 (42%), Gaps = 45/312 (14%)
Query: 691 ALKRGKRGTMLSNDIILSSQPTIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDG 750
AL+R K + + ++P + +L R ++F +IG G FG V ++++
Sbjct: 45 ALRRDK----YVAEFLEWAKPFTQLVKEMQLHR--EDFEIIKVIGRGAFGEVAVVKMKNT 98
Query: 751 VEI-AIKVFHPQCASTLKSFEAEC-----EVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804
I A+K+ + LK E C +V+ N + + + + +++ LV++Y
Sbjct: 99 ERIYAMKILNKW--EMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 156
Query: 805 SNGSL-------EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNV 857
G L ED L + A + + ID L Y +H D+KP NV
Sbjct: 157 VGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNV 206
Query: 858 LLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPV 917
LLD + L+DFG L +D + + + T Y++P+ + E + ++ +
Sbjct: 207 LLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 265
Query: 918 SLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLAL--ECTMESPEKRID----AKDTITRLL 971
SL V +L GE +A + L+ + + E + P D AKD I RL+
Sbjct: 266 SL-GVCMYEMLYGETPFYA---ESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
Query: 972 KIRDTLSKRIGN 983
R+ +R+G
Sbjct: 322 CSRE---RRLGQ 330
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLK------SFEAECEVIKN 778
D + +G G F V + R + G++ A K + + + E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEY 838
I+H N++ + N L+ E ++ G L D L +L + I + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHCDLKPSNVLLDEDMVA----HLSDFGMAKLLSGEDESTMRTQTLATIGY 894
LH S I H DLKP N++L + V + DFG+A + +E T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-AKEQCLLSIFSLALECT 953
+AP+ + L L+ D+ + ++ + LLSG K++ L ++ ++ E
Sbjct: 184 VAPEIVNYEPLGLEA---DMWSIGVITYI---LLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 954 MES-PEKRIDAKDTITRLL 971
E AKD I RLL
Sbjct: 238 DEYFSNTSALAKDFIRRLL 256
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 444 QGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503
Q ++L F K IPD + ++ LDL+ N + S + LQ L+L
Sbjct: 15 QCMELNFYK----IPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 68
Query: 504 VIPSTFWNLKDILSFDISSNLLDGPISLAIG------NLKAVVGIDLSRNNLSGNIPTTL 557
+ + +L + + ++ N + SLA+G +L+ +V ++ + +L N P +
Sbjct: 69 IEDGAYQSLSHLSTLILTGNPIQ---SLALGAFSGLSSLQKLVALETNLASLE-NFP--I 122
Query: 558 EGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKI 597
LK+L+ +++A+N ++ +PE F N+T+LE LDLS+NKI
Sbjct: 123 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 366 NCKKLRYLGLGGNPLDGFLPSSIGNLSLS-----------------LERLNIAFCNISGN 408
C +L + + N LP S NL LS L+ L+++ C I
Sbjct: 15 QCMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI 69
Query: 409 IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLN 468
A +LS+L L L GN + F GL LQ L LA I L L
Sbjct: 70 EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLASLENFPIGHLKTLK 129
Query: 469 ELDLNGNKI-SGSISSCLGNLTSLQYLNLGSNR 500
EL++ N I S + NLT+L++L+L SN+
Sbjct: 130 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 162
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 15/193 (7%)
Query: 721 LLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR 780
++ +D + IG G FG R + E+ + + ++ + E +++R
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 72
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLH 840
H N+V+ A+V+EY S G L + + C F + +
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVS 128
Query: 841 FGHSTPIIHCDLKPSNVLLDEDMVAHLS--DFGMAKLLSGEDESTMRTQTLATIG---YM 895
+ H+ + H DLK N LLD L DFG +K S + +Q +T+G Y+
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYI 182
Query: 896 APDEIFVGELSLK 908
AP+ + E K
Sbjct: 183 APEVLLKKEYDGK 195
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 17/260 (6%)
Query: 43 TYDPTNLLGTNWTSNASICSWIGI--ICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLK 100
TY G + CS +G+ + S T L+L + ++ + L L
Sbjct: 22 TYSAMCPFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLY 81
Query: 101 SLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGK 160
+L L +NK+S + + L+ LY+ N L + SS++++R+ N++ K
Sbjct: 82 ALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELRIHDNRIR-K 137
Query: 161 LPENICNHLRYLKHLFLRENMFY--GKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLT 218
+P+ + + LR + + + N G P + K L L + L+G IPK++
Sbjct: 138 VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLK-LNYLRISEAKLTG-IPKDLPE-- 193
Query: 219 VLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSL 278
L + L +NK+ +++ L L LG N + + ++ + TL+E+ L NN L
Sbjct: 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253
Query: 279 SGSLPSRIDLALPNLEFLNL 298
SR+ LP+L+ L +
Sbjct: 254 -----SRVPAGLPDLKLLQV 268
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 100/263 (38%), Gaps = 42/263 (15%)
Query: 291 PNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNN 350
P+ L+L N S L L + +N S A LR L+ I N+
Sbjct: 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113
Query: 351 LTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIP 410
L P LPSS+ L + R+ +P
Sbjct: 114 LVEIPPN--------------------------LPSSLVELRIHDNRIR--------KVP 139
Query: 411 KAI-GNLSNLIVLSLGGNNL--SGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRL 467
K + L N+ + +GGN L SG P F GL KL L ++ KL G IP + L L
Sbjct: 140 KGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKD--LPETL 195
Query: 468 NELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDG 527
NEL L+ NKI L + L L LG N+ + + L + + +N L
Sbjct: 196 NELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR 255
Query: 528 PISLAIGNLKAVVGIDLSRNNLS 550
+ + +LK + + L NN++
Sbjct: 256 -VPAGLPDLKLLQVVYLHTNNIT 277
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 409 IPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLN 468
+PK I + +L L N++S F GLQ L L L NK++ L +L
Sbjct: 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 469 ELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLD-- 526
+L ++ N + I L +SL L + NR V F L+++ ++ N L+
Sbjct: 106 KLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS 162
Query: 527 GPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTS 586
G A LK + + +S L+G IP L ++L + L +N+++ E +
Sbjct: 163 GFEPGAFDGLK-LNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSK 218
Query: 587 LESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGP 630
L L L +N+I S L L+EL+L NKL +P G P
Sbjct: 219 LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVPAGLP 261
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 36/231 (15%)
Query: 306 TIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLA 365
+P I+ + LL++ +N S L++L + NN S E F +
Sbjct: 47 AVPKEISPDT--TLLDLQNNDISELRKDDFKGLQHLYAL-VLVNNKISKIHEKAF----S 99
Query: 366 NCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAI-GNLSNLIVLSL 424
+KL+ L + N L P NL SL L I I +PK + L N+ + +
Sbjct: 100 PLRKLQKLYISKNHLVEIPP----NLPSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEM 154
Query: 425 GGNNL--SGSIPVTFGGLQ---------KLQG-----------LDLAFNKLAGSIPDEIC 462
GGN L SG P F GL+ KL G L L NK+ +++
Sbjct: 155 GGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLL 214
Query: 463 LLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLK 513
S+L L L N+I + L L +L+ L+L +N+ + V P+ +LK
Sbjct: 215 RYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRV-PAGLPDLK 264
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 719 FELLRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAE----C 773
+E +G G FG V+R + + G + A+K L+ F E C
Sbjct: 65 YEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVAC 118
Query: 774 EVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIA 833
+ + R +V + + + + +E + GSL + C + +
Sbjct: 119 AGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC----LPEDRALYYLG 171
Query: 834 SALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMA 873
ALE L + H+ I+H D+K NVLL D A L DFG A
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A LE V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIIS----SCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++K + H+N++ +++ S ++F+ +V+E M + +L + L+
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMS 129
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPS 855
+ A+VLE + SLED + + L I I + S +EY+H S +I+ D+KP
Sbjct: 71 YNAMVLELLGP-SLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVH---SKNLIYRDVKPE 126
Query: 856 NVLL-----DEDMVAHLSDFGMAK 874
N L+ ++ V H+ DFG+AK
Sbjct: 127 NFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 89 IPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLS 134
+P EI NLS+L+ LDLSHN+L+S +P+ + + LK Y DN ++
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 23/109 (21%)
Query: 288 LALPNLEFLNLGINSFS--------------GTIPSSITNASKLILLEMGSNSFSGFIPS 333
L L NL+ N+ N F +P+ I N S L +L++ N + +P+
Sbjct: 229 LDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTS-LPA 287
Query: 334 AIGNLRNLKLFDIFFNNLTSSTP-ELGFLSSLANCKKLRYLGLGGNPLD 381
+G+ LK F FF+N+ ++ P E G N L++LG+ GNPL+
Sbjct: 288 ELGSCFQLKYF-YFFDNMVTTLPWEFG------NLCNLQFLGVEGNPLE 329
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 186 IPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLD 245
I +++ K L L+L N+L+ +P EI NL+ L+ + L +N+L +P E+G L
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLK 296
Query: 246 VLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSL 282
F+N+ +P N+ L+ + + N L
Sbjct: 297 YFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQF 332
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 722 LRATDNFAENNIIGIGGFGSVYRA-RLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR 780
++ TD + IG+G + R E A+K+ + E +++ +
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 781 HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN---IMIDIASALE 837
H N++ + + + +V E G L D + F ++ I +E
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKI----LRQKFFSEREASAVLFTITKTVE 130
Query: 838 YLHFGHSTPIIHCDLKPSNVL-LDED---MVAHLSDFGMAKLLSGED 880
YLH + ++H DLKPSN+L +DE + DFG AK L E+
Sbjct: 131 YLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 11 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 66
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 122
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 123 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 176
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 177 PYVVTRYYRAPEVI 190
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPEVVTRYYRAPEVI 197
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A LE V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIIS----SCSNDDFK--ALVLEYMSNGSLEDCLHSSNCALNIFCRL 826
++K + H+N++ +++ S ++F+ +V+E M + +L + L+
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMS 129
Query: 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 198
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 202
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 446 LDLAFNKLAGSIPDEICLLSRLNELDLNGNKIS--GSISSCLGNLTSLQYLNLGSNRFTF 503
LD + N L ++ + L+ L L L N++ I+ + SLQ L++ N ++
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 504 VIP--STFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLK 561
W K +LS ++SSN+L I + + +DL N + IP + L+
Sbjct: 389 DEKKGDCSWT-KSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKS-IPKQVVKLE 444
Query: 562 SLQNISLAYNRLEGPIPES-FGNMTSLESLDLSNNKISGSIPVSFEKLSYL-KELNLSFN 619
+LQ +++A N+L+ +P+ F +TSL+ + L N S P ++ YL + LN +
Sbjct: 445 ALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP----RIDYLSRWLNKNSQ 499
Query: 620 KLKGEIPRGG 629
K +G G
Sbjct: 500 KEQGSAKCSG 509
Score = 36.2 bits (82), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 27/192 (14%)
Query: 76 TTLNLSSFNLQGTIPPEI---ANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQ 132
+ +N+ +F + GT + + +S LD S+N L+ + + ++ L+ L L NQ
Sbjct: 300 SNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359
Query: 133 LS--GSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYG------ 184
L ++ T S+ + +S+N +S + C+ + L L + N+
Sbjct: 360 LKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL 419
Query: 185 ---------------KIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNK 229
IP + K + LQEL++ N L LT LQ+I L N
Sbjct: 420 PPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479
Query: 230 LHGEIPQEIGYL 241
P+ I YL
Sbjct: 480 WDCSCPR-IDYL 490
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 542 IDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEG-PIPESFGNMTSLESLDLSNNKISGS 600
+DLS N L + + +L+++ L++N + PI + FGNM+ L+ L LS + S
Sbjct: 74 LDLSHNKL---VKISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS 130
Query: 601 IPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAES 638
+ L+ K L L + GE +F ES
Sbjct: 131 SVLPIAHLNISKVL-LVLGETYGEKEDPEGLQDFNTES 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 235
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 12 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 67
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 124 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 177
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 178 PYVVTRYYRAPEVI 191
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 197
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 19 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 74
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 131 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 184
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 185 PYVVTRYYRAPEVI 198
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 197
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 17 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 72
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 128
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 129 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 182
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 183 PYVVTRYYRAPEVI 196
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 191
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 19 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 74
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 131 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 184
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 185 PYVVTRYYRAPEVI 198
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 12 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 67
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 124 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 177
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 178 PYVVTRYYRAPEVI 191
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 723 RATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNI-- 779
+ D F + G G FG+V + + G+ +AIK + + E ++++++
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----KVIQDPRFRNRELQIMQDLAV 75
Query: 780 -RHRNLVKIIS-------SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL----N 827
H N+V++ S D + +V+EY+ D LH C N + R
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-----DTLH--RCCRNYYRRQVAPPP 128
Query: 828 IMIDI-----ASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLSGEDE 881
I+I + ++ LH S + H D+KP NVL++E D L DFG AK LS +
Sbjct: 129 ILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187
Query: 882 STMRTQTLATIGYMAPDEIF 901
+ + + Y AP+ IF
Sbjct: 188 NVA---YICSRYYRAPELIF 204
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 717 SYFELLRATDNFAENNIIGIGGFGSV---YRARLEDGVEIAIKVFHP-QCASTLKSFEAE 772
S F +L+ N IG G G V Y A L+ V I K+ P Q + K E
Sbjct: 18 STFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRE 73
Query: 773 CEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLN----- 827
++K + H+N++ +++ + LE + L L +N I L+
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 828 -IMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S M T
Sbjct: 130 YLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMT 183
Query: 887 QTLATIGYMAPDEI 900
+ T Y AP+ I
Sbjct: 184 PYVVTRYYRAPEVI 197
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP+ I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVI 197
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEI 900
HS IIH DLKPSN+++ D + DFG+A+ S + M T + T Y AP+ I
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---NFMMTPYVVTRYYRAPEVI 195
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 727 NFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRN-- 783
NF IG G FG + + L +AIK+ S E K + +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--EPMKSRAPQLHLEYRFYKQLGSGDGI 67
Query: 784 -LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG 842
V C + A+VLE + SLED + ++ L I I + S +EY+H
Sbjct: 68 PQVYYFGPCGK--YNAMVLELLGP-SLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH-- 122
Query: 843 HSTPIIHCDLKPSNVLLDE-----DMVAHLSDFGMAK 874
S +I+ D+KP N L+ V H+ DFG+AK
Sbjct: 123 -SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 843 HSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV 902
HS IIH DLKPSN+++ D + DFG+A+ S M T + T Y AP E+ +
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP-EVIL 236
Query: 903 G 903
G
Sbjct: 237 G 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,339,746
Number of Sequences: 62578
Number of extensions: 1141378
Number of successful extensions: 6127
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 2714
Number of HSP's gapped (non-prelim): 1778
length of query: 985
length of database: 14,973,337
effective HSP length: 108
effective length of query: 877
effective length of database: 8,214,913
effective search space: 7204478701
effective search space used: 7204478701
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)