Query 001988
Match_columns 985
No_of_seqs 1031 out of 6531
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 13:58:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001988.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001988hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 9E-115 2E-119 1106.8 68.0 892 25-977 24-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.2E-62 4.8E-67 625.2 34.2 518 97-649 69-588 (968)
3 KOG1187 Serine/threonine prote 100.0 1E-43 2.2E-48 393.0 24.1 262 712-976 61-355 (361)
4 KOG0472 Leucine-rich repeat pr 100.0 2.5E-47 5.4E-52 392.9 -17.2 488 75-622 47-541 (565)
5 KOG0581 Mitogen-activated prot 100.0 1.8E-42 3.8E-47 358.7 16.6 235 727-969 80-335 (364)
6 KOG0472 Leucine-rich repeat pr 100.0 4.2E-46 9.1E-51 383.9 -11.1 480 141-644 41-540 (565)
7 KOG0192 Tyrosine kinase specif 100.0 1.4E-41 3E-46 372.6 21.2 245 729-979 44-309 (362)
8 KOG0615 Serine/threonine prote 100.0 1.7E-41 3.7E-46 352.7 17.0 238 724-969 170-437 (475)
9 KOG0197 Tyrosine kinases [Sign 100.0 3.3E-41 7.1E-46 366.2 14.0 245 726-976 206-464 (468)
10 KOG4194 Membrane glycoprotein 100.0 6.6E-42 1.4E-46 367.5 8.2 376 174-583 82-466 (873)
11 KOG4194 Membrane glycoprotein 100.0 5.5E-42 1.2E-46 368.1 6.4 369 196-597 80-451 (873)
12 KOG0595 Serine/threonine-prote 100.0 1.4E-40 3.1E-45 346.9 16.0 199 724-930 8-215 (429)
13 KOG0575 Polo-like serine/threo 100.0 3.4E-40 7.3E-45 361.0 18.4 237 726-969 18-269 (592)
14 KOG0591 NIMA (never in mitosis 100.0 2.8E-41 6E-46 333.6 6.5 243 726-972 19-284 (375)
15 KOG1026 Nerve growth factor re 100.0 5.9E-39 1.3E-43 365.0 15.6 252 725-980 485-769 (774)
16 KOG0598 Ribosomal protein S6 k 100.0 1.1E-38 2.4E-43 330.6 14.0 232 724-962 23-270 (357)
17 KOG0593 Predicted protein kina 100.0 1.9E-38 4.2E-43 316.7 12.8 236 726-968 2-283 (396)
18 KOG0578 p21-activated serine/t 100.0 2.1E-38 4.6E-43 344.2 13.1 236 726-969 273-523 (550)
19 KOG0661 MAPK related serine/th 100.0 7.9E-39 1.7E-43 338.5 9.1 238 724-969 8-291 (538)
20 KOG0193 Serine/threonine prote 100.0 4.1E-38 9E-43 342.2 14.6 253 718-977 384-657 (678)
21 KOG0618 Serine/threonine phosp 100.0 1.6E-40 3.4E-45 376.0 -4.4 482 78-620 3-487 (1081)
22 KOG0198 MEKK and related serin 100.0 1.9E-37 4.2E-42 328.9 18.2 245 726-974 17-281 (313)
23 KOG0659 Cdk activating kinase 100.0 1.6E-37 3.4E-42 305.5 15.0 237 726-969 2-281 (318)
24 KOG0618 Serine/threonine phosp 100.0 2.8E-40 6E-45 374.0 -5.3 485 102-645 3-489 (1081)
25 KOG0592 3-phosphoinositide-dep 100.0 1.3E-37 2.7E-42 334.6 15.1 242 722-968 69-337 (604)
26 KOG0582 Ste20-like serine/thre 100.0 7.6E-37 1.6E-41 321.1 18.8 241 724-968 24-292 (516)
27 KOG0600 Cdc2-related protein k 100.0 3.9E-37 8.5E-42 328.2 16.1 238 725-968 116-399 (560)
28 KOG0196 Tyrosine kinase, EPH ( 100.0 5.7E-37 1.2E-41 340.4 12.6 243 729-975 632-893 (996)
29 KOG0616 cAMP-dependent protein 100.0 6.6E-36 1.4E-40 298.4 16.9 231 726-973 44-278 (355)
30 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.5E-36 1.2E-40 336.3 18.0 249 724-976 5-337 (338)
31 KOG1094 Discoidin domain recep 100.0 6.3E-36 1.4E-40 321.8 16.2 244 726-973 538-804 (807)
32 KOG1095 Protein tyrosine kinas 100.0 2.9E-36 6.2E-41 355.9 14.8 249 726-978 692-966 (1025)
33 KOG0583 Serine/threonine prote 100.0 1.2E-35 2.6E-40 329.4 18.5 244 724-975 15-280 (370)
34 KOG3653 Transforming growth fa 100.0 2.2E-35 4.7E-40 312.3 19.3 248 725-979 209-509 (534)
35 KOG4721 Serine/threonine prote 100.0 1.5E-36 3.3E-41 324.8 9.6 234 728-977 126-372 (904)
36 KOG0194 Protein tyrosine kinas 100.0 3.9E-35 8.4E-40 324.8 19.6 247 725-978 156-425 (474)
37 KOG0597 Serine-threonine prote 100.0 4E-36 8.8E-41 322.2 10.4 235 726-968 2-250 (808)
38 KOG0605 NDR and related serine 100.0 3.4E-35 7.4E-40 316.5 15.4 233 724-962 139-435 (550)
39 KOG0444 Cytoskeletal regulator 100.0 1.6E-37 3.5E-42 334.9 -3.1 368 196-626 9-379 (1255)
40 cd05096 PTKc_DDR1 Catalytic do 100.0 1.8E-34 3.9E-39 319.0 20.6 242 726-971 5-303 (304)
41 KOG0201 Serine/threonine prote 100.0 5.6E-36 1.2E-40 314.8 7.7 237 726-969 13-263 (467)
42 KOG0588 Serine/threonine prote 100.0 3.2E-35 6.9E-40 322.2 13.6 237 726-970 12-264 (786)
43 KOG0694 Serine/threonine prote 100.0 8.4E-35 1.8E-39 322.2 15.9 232 724-963 366-613 (694)
44 cd05104 PTKc_Kit Catalytic dom 100.0 2E-34 4.4E-39 327.1 19.4 245 725-973 34-374 (375)
45 KOG0589 Serine/threonine prote 100.0 3.2E-35 6.9E-40 319.0 12.0 238 726-969 4-258 (426)
46 KOG0663 Protein kinase PITSLRE 100.0 7.6E-35 1.7E-39 294.9 13.9 237 725-968 75-360 (419)
47 KOG0444 Cytoskeletal regulator 100.0 7.8E-37 1.7E-41 329.7 -1.2 372 94-506 4-379 (1255)
48 PHA02988 hypothetical protein; 100.0 8.9E-34 1.9E-38 309.4 21.9 234 731-975 25-281 (283)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 4.1E-34 8.9E-39 324.2 19.5 247 724-974 36-373 (374)
50 PF07714 Pkinase_Tyr: Protein 100.0 3.4E-34 7.3E-39 308.7 17.4 237 730-970 3-259 (259)
51 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.4E-34 9.6E-39 309.3 17.9 244 725-973 4-265 (266)
52 KOG4278 Protein tyrosine kinas 100.0 4.2E-35 9.2E-40 315.9 9.5 251 719-975 260-525 (1157)
53 KOG0611 Predicted serine/threo 100.0 9.9E-35 2.1E-39 299.4 11.2 238 726-970 53-304 (668)
54 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-33 2.3E-38 315.2 19.9 230 732-968 1-250 (323)
55 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.6E-33 3.4E-38 303.3 20.2 239 726-970 4-255 (256)
56 KOG0658 Glycogen synthase kina 100.0 1.8E-34 4E-39 298.4 12.2 231 726-968 24-305 (364)
57 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-33 3.3E-38 313.2 20.3 248 726-978 7-273 (316)
58 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.7E-34 2.1E-38 322.1 19.0 248 724-975 35-399 (400)
59 cd05033 PTKc_EphR Catalytic do 100.0 1.8E-33 3.9E-38 304.7 19.5 244 726-973 4-265 (266)
60 KOG0574 STE20-like serine/thre 100.0 1.5E-35 3.2E-40 294.4 2.6 234 728-969 35-283 (502)
61 cd05093 PTKc_TrkB Catalytic do 100.0 2.4E-33 5.3E-38 307.4 20.4 249 725-977 4-283 (288)
62 cd05631 STKc_GRK4 Catalytic do 100.0 1.7E-33 3.6E-38 308.0 19.0 235 727-968 1-260 (285)
63 PTZ00263 protein kinase A cata 100.0 1.1E-33 2.4E-38 315.8 17.8 233 726-968 18-270 (329)
64 cd06649 PKc_MEK2 Catalytic dom 100.0 2.9E-33 6.3E-38 312.8 21.2 238 725-970 4-302 (331)
65 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-33 2.4E-38 298.9 16.4 245 723-972 94-375 (576)
66 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-33 3.8E-38 315.1 19.2 234 726-969 1-257 (333)
67 KOG0594 Protein kinase PCTAIRE 100.0 7.5E-34 1.6E-38 295.1 14.7 242 726-974 11-309 (323)
68 KOG4257 Focal adhesion tyrosin 100.0 4E-34 8.6E-39 309.4 13.0 243 727-975 390-651 (974)
69 cd05072 PTKc_Lyn Catalytic dom 100.0 4.6E-33 1E-37 300.6 21.1 242 725-972 5-260 (261)
70 KOG0660 Mitogen-activated prot 100.0 8.9E-34 1.9E-38 292.8 14.7 240 724-969 20-310 (359)
71 PTZ00267 NIMA-related protein 100.0 2.8E-33 6E-38 327.3 20.3 238 727-968 68-322 (478)
72 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.9E-33 8.4E-38 305.6 20.2 236 726-968 5-284 (288)
73 cd05612 STKc_PRKX_like Catalyt 100.0 1E-33 2.2E-38 310.7 15.4 234 726-969 1-254 (291)
74 cd05094 PTKc_TrkC Catalytic do 100.0 4.8E-33 1E-37 305.5 20.7 248 726-977 5-286 (291)
75 cd05048 PTKc_Ror Catalytic Dom 100.0 2.7E-33 5.9E-38 306.3 18.4 243 726-972 5-282 (283)
76 cd05593 STKc_PKB_gamma Catalyt 100.0 5.2E-33 1.1E-37 310.0 20.7 231 732-969 1-251 (328)
77 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-35 6.9E-40 284.8 2.2 238 724-969 9-267 (355)
78 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-33 5.5E-38 310.7 17.5 228 734-968 1-246 (312)
79 cd05049 PTKc_Trk Catalytic dom 100.0 4.6E-33 1E-37 303.9 19.3 243 725-971 4-279 (280)
80 cd05084 PTKc_Fes Catalytic dom 100.0 6.7E-33 1.5E-37 297.6 20.2 236 732-971 1-251 (252)
81 cd05595 STKc_PKB_beta Catalyti 100.0 3.4E-33 7.4E-38 311.0 18.4 230 732-968 1-250 (323)
82 cd07848 STKc_CDKL5 Catalytic d 100.0 3.4E-33 7.3E-38 306.2 17.9 237 726-968 1-283 (287)
83 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.1E-33 1.1E-37 304.3 19.3 245 726-974 4-284 (284)
84 cd05068 PTKc_Frk_like Catalyti 100.0 8.1E-33 1.8E-37 298.7 20.6 242 725-972 5-260 (261)
85 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.3E-33 5E-38 302.9 16.2 245 723-973 3-261 (261)
86 cd06650 PKc_MEK1 Catalytic dom 100.0 6.6E-33 1.4E-37 309.9 20.1 237 725-969 4-299 (333)
87 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.5E-33 1.6E-37 305.8 20.3 237 725-968 4-287 (303)
88 cd05111 PTK_HER3 Pseudokinase 100.0 9.9E-33 2.1E-37 301.0 21.0 247 726-977 7-272 (279)
89 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.3E-33 1.6E-37 298.0 19.6 239 726-970 4-255 (256)
90 cd05054 PTKc_VEGFR Catalytic d 100.0 3.5E-33 7.7E-38 312.2 17.8 248 724-975 5-335 (337)
91 cd05062 PTKc_IGF-1R Catalytic 100.0 4.5E-33 9.7E-38 303.5 17.9 245 724-972 4-277 (277)
92 PTZ00426 cAMP-dependent protei 100.0 4.3E-33 9.4E-38 311.5 18.2 235 725-969 29-284 (340)
93 cd05059 PTKc_Tec_like Catalyti 100.0 8.8E-33 1.9E-37 297.4 19.6 239 726-970 4-255 (256)
94 cd05109 PTKc_HER2 Catalytic do 100.0 7.8E-33 1.7E-37 302.0 19.2 249 725-978 6-273 (279)
95 cd05594 STKc_PKB_alpha Catalyt 100.0 9.5E-33 2.1E-37 307.9 20.3 231 732-969 1-252 (325)
96 KOG2052 Activin A type IB rece 100.0 1.6E-32 3.4E-37 288.4 20.5 246 723-975 208-505 (513)
97 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-32 2.3E-37 313.4 20.8 248 723-974 34-400 (401)
98 KOG0580 Serine/threonine prote 100.0 7.8E-34 1.7E-38 275.6 9.7 238 725-970 21-274 (281)
99 cd05601 STKc_CRIK Catalytic do 100.0 7.7E-33 1.7E-37 309.6 19.2 237 726-968 1-262 (330)
100 cd05090 PTKc_Ror1 Catalytic do 100.0 1.2E-32 2.5E-37 301.3 20.1 243 726-972 5-282 (283)
101 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-32 2.6E-37 302.7 20.3 248 723-974 9-292 (293)
102 KOG4279 Serine/threonine prote 100.0 2.5E-33 5.3E-38 306.0 14.3 230 733-968 582-831 (1226)
103 KOG0599 Phosphorylase kinase g 100.0 1E-33 2.2E-38 278.3 9.6 239 723-969 14-283 (411)
104 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-32 2.9E-37 306.4 19.9 230 732-968 2-255 (323)
105 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-32 3.9E-37 296.3 20.2 242 726-973 6-262 (263)
106 cd05626 STKc_LATS2 Catalytic d 100.0 2.1E-32 4.5E-37 311.9 21.3 238 727-969 2-305 (381)
107 KOG1989 ARK protein kinase fam 100.0 4.7E-33 1E-37 319.0 15.9 250 726-977 37-315 (738)
108 cd05061 PTKc_InsR Catalytic do 100.0 9.2E-33 2E-37 302.8 17.6 247 724-974 4-279 (288)
109 cd08228 STKc_Nek6 Catalytic do 100.0 2.1E-32 4.5E-37 296.6 20.1 243 726-974 2-266 (267)
110 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-32 3.7E-37 300.0 19.2 244 726-973 4-283 (284)
111 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-32 2.4E-37 312.8 18.3 237 726-968 1-295 (364)
112 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.8E-33 2.1E-37 311.7 17.6 238 726-969 1-285 (350)
113 PTZ00283 serine/threonine prot 100.0 1.2E-32 2.7E-37 321.7 19.0 243 723-969 29-297 (496)
114 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-32 2.9E-37 304.4 18.2 249 725-977 17-303 (307)
115 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.7E-32 5.8E-37 301.6 20.5 249 724-976 13-299 (304)
116 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-32 3.2E-37 304.2 18.2 237 724-969 33-293 (382)
117 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.7E-32 5.9E-37 302.9 20.3 252 725-980 11-300 (314)
118 cd05592 STKc_nPKC_theta_delta 100.0 1.7E-32 3.6E-37 304.4 18.5 227 732-965 1-243 (316)
119 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-32 2.9E-37 305.9 17.6 227 732-965 2-245 (318)
120 cd05066 PTKc_EphR_A Catalytic 100.0 2.2E-32 4.7E-37 296.3 18.9 244 726-973 4-266 (267)
121 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-32 4.2E-37 304.9 19.0 231 732-969 1-254 (321)
122 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-32 4.4E-37 298.7 18.7 242 726-971 5-279 (280)
123 KOG0577 Serine/threonine prote 100.0 8.2E-34 1.8E-38 305.1 7.3 232 728-971 28-280 (948)
124 cd05045 PTKc_RET Catalytic dom 100.0 3.3E-32 7.1E-37 298.8 20.2 245 727-975 1-288 (290)
125 cd05097 PTKc_DDR_like Catalyti 100.0 3.1E-32 6.7E-37 299.7 19.9 243 726-972 5-295 (295)
126 PLN00034 mitogen-activated pro 100.0 9E-33 2E-37 311.8 16.0 233 726-969 74-328 (353)
127 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.7E-32 6E-37 306.4 19.7 248 725-976 6-342 (343)
128 PHA03212 serine/threonine kina 100.0 2.1E-32 4.7E-37 311.0 19.0 231 725-968 91-375 (391)
129 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.7E-32 3.7E-37 308.2 17.9 237 727-969 1-290 (338)
130 cd05071 PTKc_Src Catalytic dom 100.0 3.7E-32 8.1E-37 293.6 19.8 242 725-973 5-260 (262)
131 cd05051 PTKc_DDR Catalytic dom 100.0 4.9E-32 1.1E-36 298.4 21.0 243 725-971 4-295 (296)
132 cd05629 STKc_NDR_like_fungal C 100.0 3.2E-32 7E-37 310.2 20.2 238 726-969 1-305 (377)
133 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-32 5.8E-37 305.5 19.1 236 727-968 1-266 (332)
134 cd05590 STKc_nPKC_eta Catalyti 100.0 2E-32 4.3E-37 304.4 17.9 225 732-963 1-241 (320)
135 cd05065 PTKc_EphR_B Catalytic 100.0 2.9E-32 6.2E-37 295.8 18.8 244 726-973 4-268 (269)
136 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-32 4.2E-37 299.5 17.3 242 727-972 6-282 (283)
137 cd05043 PTK_Ryk Pseudokinase d 100.0 4.8E-32 1E-36 295.9 20.4 249 724-976 4-279 (280)
138 cd05628 STKc_NDR1 Catalytic do 100.0 4E-32 8.7E-37 307.6 20.4 239 726-969 1-293 (363)
139 cd05055 PTKc_PDGFR Catalytic d 100.0 4.8E-32 1E-36 298.9 20.3 246 724-973 33-301 (302)
140 cd05589 STKc_PKN Catalytic dom 100.0 2.7E-32 5.8E-37 304.1 18.5 233 728-968 1-256 (324)
141 cd05085 PTKc_Fer Catalytic dom 100.0 7.3E-32 1.6E-36 289.2 21.1 235 732-971 1-249 (250)
142 cd05057 PTKc_EGFR_like Catalyt 100.0 8E-32 1.7E-36 294.0 21.7 248 726-978 7-273 (279)
143 cd05032 PTKc_InsR_like Catalyt 100.0 2.4E-32 5.2E-37 297.8 17.5 243 725-971 5-276 (277)
144 cd05618 STKc_aPKC_iota Catalyt 100.0 1.9E-32 4E-37 305.7 16.8 225 732-963 1-250 (329)
145 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.9E-32 1.3E-36 291.7 20.2 241 725-972 5-259 (260)
146 cd05035 PTKc_Axl_like Catalyti 100.0 7E-32 1.5E-36 293.4 20.9 242 728-973 1-272 (273)
147 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-32 4E-37 305.9 16.6 230 732-968 1-261 (329)
148 cd05620 STKc_nPKC_delta Cataly 100.0 2.9E-32 6.2E-37 302.5 18.0 229 732-967 1-246 (316)
149 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.8E-32 1.5E-36 291.3 20.3 241 725-972 5-259 (260)
150 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.6E-32 1E-36 295.5 19.1 244 724-971 4-276 (277)
151 cd05089 PTKc_Tie1 Catalytic do 100.0 7E-32 1.5E-36 297.2 20.7 247 726-979 2-281 (297)
152 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.9E-32 1.1E-36 296.5 19.3 245 726-974 4-284 (284)
153 cd05075 PTKc_Axl Catalytic dom 100.0 7E-32 1.5E-36 293.3 20.4 241 729-973 2-271 (272)
154 cd05587 STKc_cPKC Catalytic do 100.0 3.6E-32 7.8E-37 303.1 18.5 230 727-963 1-246 (324)
155 cd05575 STKc_SGK Catalytic dom 100.0 3.3E-32 7.1E-37 303.3 17.9 226 732-964 1-242 (323)
156 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7E-32 1.5E-36 291.3 19.9 229 732-970 1-261 (262)
157 cd05115 PTKc_Zap-70 Catalytic 100.0 9.4E-32 2E-36 289.5 20.8 235 734-973 3-255 (257)
158 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.8E-32 1.1E-36 296.3 18.9 240 729-974 7-282 (283)
159 PRK13184 pknD serine/threonine 100.0 4.7E-32 1E-36 323.4 20.2 247 726-976 2-293 (932)
160 cd06646 STKc_MAP4K5 Catalytic 100.0 3.8E-32 8.1E-37 294.5 17.8 238 725-969 8-265 (267)
161 cd05619 STKc_nPKC_theta Cataly 100.0 4.4E-32 9.6E-37 300.9 18.6 229 732-967 1-246 (316)
162 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.6E-32 1.4E-36 299.1 20.0 236 726-968 6-285 (309)
163 cd05088 PTKc_Tie2 Catalytic do 100.0 7.5E-32 1.6E-36 297.6 20.2 245 725-976 6-283 (303)
164 cd05596 STKc_ROCK Catalytic do 100.0 2.9E-32 6.3E-37 308.8 17.4 239 724-969 41-304 (370)
165 cd05605 STKc_GRK4_like Catalyt 100.0 4.8E-32 1.1E-36 296.4 18.5 236 727-969 1-261 (285)
166 cd07862 STKc_CDK6 Catalytic do 100.0 8.8E-32 1.9E-36 295.4 20.5 235 726-968 1-286 (290)
167 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.7E-32 2.1E-36 291.5 20.6 245 725-973 4-267 (268)
168 cd05607 STKc_GRK7 Catalytic do 100.0 5.7E-32 1.2E-36 294.6 18.8 230 734-970 1-251 (277)
169 cd05570 STKc_PKC Catalytic dom 100.0 4.2E-32 9.1E-37 301.6 18.1 230 732-968 1-251 (318)
170 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-32 8.5E-37 296.3 17.5 229 734-968 1-256 (280)
171 cd05039 PTKc_Csk_like Catalyti 100.0 1E-31 2.2E-36 289.2 20.3 238 725-973 5-256 (256)
172 cd05095 PTKc_DDR2 Catalytic do 100.0 8E-32 1.7E-36 296.6 20.0 243 726-972 5-296 (296)
173 cd05041 PTKc_Fes_like Catalyti 100.0 5.8E-32 1.3E-36 290.2 18.4 236 732-971 1-250 (251)
174 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-31 2.9E-36 289.0 21.2 240 726-972 6-259 (260)
175 cd05598 STKc_LATS Catalytic do 100.0 4.4E-32 9.6E-37 309.1 18.4 238 726-969 1-301 (376)
176 cd05604 STKc_SGK3 Catalytic do 100.0 3.9E-32 8.5E-37 303.0 17.6 232 732-970 1-248 (325)
177 KOG0199 ACK and related non-re 100.0 9.5E-33 2.1E-37 302.5 12.1 238 729-971 113-370 (1039)
178 cd05621 STKc_ROCK2 Catalytic d 100.0 5.4E-32 1.2E-36 306.1 18.8 239 724-969 41-304 (370)
179 cd08219 STKc_Nek3 Catalytic do 100.0 9.8E-32 2.1E-36 289.1 19.8 237 727-969 1-252 (255)
180 KOG2345 Serine/threonine prote 100.0 8.9E-33 1.9E-37 269.3 10.5 246 724-973 19-300 (302)
181 cd05116 PTKc_Syk Catalytic dom 100.0 5.6E-32 1.2E-36 291.4 17.9 234 733-972 2-254 (257)
182 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.1E-31 2.4E-36 290.9 20.3 243 726-974 2-266 (267)
183 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-31 2.5E-36 291.3 20.3 245 726-976 6-268 (270)
184 cd05050 PTKc_Musk Catalytic do 100.0 4.7E-32 1E-36 297.3 17.4 244 725-972 4-288 (288)
185 cd05058 PTKc_Met_Ron Catalytic 100.0 7.1E-32 1.5E-36 291.5 18.6 240 732-975 1-261 (262)
186 cd00192 PTKc Catalytic domain 100.0 1.4E-31 3.1E-36 288.8 20.9 236 732-971 1-262 (262)
187 cd08229 STKc_Nek7 Catalytic do 100.0 4.8E-32 1E-36 293.7 17.2 243 726-974 2-266 (267)
188 cd05616 STKc_cPKC_beta Catalyt 100.0 9.5E-32 2.1E-36 299.6 19.7 230 727-963 1-246 (323)
189 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-31 3.5E-36 287.6 20.7 236 726-973 6-256 (256)
190 KOG0579 Ste20-like serine/thre 100.0 2.1E-33 4.6E-38 303.4 6.0 235 728-968 34-288 (1187)
191 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-31 2.5E-36 288.7 19.6 237 727-969 1-253 (256)
192 cd05110 PTKc_HER4 Catalytic do 100.0 9.2E-32 2E-36 297.0 19.3 249 725-978 6-273 (303)
193 cd05112 PTKc_Itk Catalytic dom 100.0 1.4E-31 3E-36 288.2 20.1 239 726-970 4-255 (256)
194 cd05625 STKc_LATS1 Catalytic d 100.0 6E-32 1.3E-36 308.5 18.4 236 727-968 2-304 (382)
195 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-31 2.5E-36 300.5 20.2 247 725-975 11-295 (334)
196 cd05034 PTKc_Src_like Catalyti 100.0 7.9E-32 1.7E-36 290.9 18.2 243 724-972 4-260 (261)
197 cd05040 PTKc_Ack_like Catalyti 100.0 1.4E-31 3E-36 288.3 19.7 235 732-971 1-256 (257)
198 cd06644 STKc_STK10_LOK Catalyt 100.0 1.4E-31 3E-36 294.2 20.0 238 725-968 11-268 (292)
199 cd05602 STKc_SGK1 Catalytic do 100.0 6.8E-32 1.5E-36 301.1 17.6 231 732-969 1-247 (325)
200 cd06643 STKc_SLK Catalytic dom 100.0 1.1E-31 2.3E-36 293.5 18.4 236 728-969 7-262 (282)
201 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-31 2.5E-36 295.1 18.6 236 726-969 20-270 (296)
202 cd06624 STKc_ASK Catalytic dom 100.0 1.2E-31 2.6E-36 290.8 18.5 241 722-968 4-264 (268)
203 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.6E-31 3.4E-36 290.5 19.2 228 733-970 2-273 (274)
204 cd05597 STKc_DMPK_like Catalyt 100.0 1.9E-31 4.1E-36 298.0 20.3 239 726-969 1-266 (331)
205 cd05603 STKc_SGK2 Catalytic do 100.0 1E-31 2.2E-36 299.1 18.0 226 732-964 1-242 (321)
206 cd06625 STKc_MEKK3_like Cataly 100.0 2.7E-31 5.8E-36 287.1 20.7 239 726-969 2-260 (263)
207 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-31 2.8E-36 304.7 19.0 236 727-969 1-288 (372)
208 PHA03211 serine/threonine kina 100.0 9E-32 1.9E-36 309.2 17.8 234 725-969 168-455 (461)
209 KOG0667 Dual-specificity tyros 100.0 9.9E-32 2.2E-36 298.5 17.3 233 726-969 186-502 (586)
210 cd06613 STKc_MAP4K3_like Catal 100.0 2.3E-31 5.1E-36 287.4 19.8 237 726-968 3-259 (262)
211 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-31 2.9E-36 298.1 17.9 230 727-963 1-246 (323)
212 cd05627 STKc_NDR2 Catalytic do 100.0 1.9E-31 4.2E-36 301.8 19.4 237 726-968 1-292 (360)
213 cd06611 STKc_SLK_like Catalyti 100.0 7.9E-32 1.7E-36 294.2 15.5 239 725-969 4-262 (280)
214 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.9E-31 6.3E-36 287.9 19.7 235 732-971 1-268 (269)
215 cd05073 PTKc_Hck Catalytic dom 100.0 3E-31 6.6E-36 286.2 19.7 242 724-972 4-259 (260)
216 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-31 3.9E-36 302.3 18.7 244 719-969 36-304 (371)
217 cd06656 STKc_PAK3 Catalytic do 100.0 2E-31 4.4E-36 293.3 18.5 235 726-968 19-268 (297)
218 cd07876 STKc_JNK2 Catalytic do 100.0 2.9E-31 6.2E-36 300.4 20.2 235 724-969 19-315 (359)
219 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-31 8.6E-36 284.8 20.3 237 732-974 1-256 (257)
220 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9E-32 2E-36 289.9 15.1 229 732-970 1-257 (258)
221 cd05624 STKc_MRCK_beta Catalyt 100.0 3.3E-31 7.2E-36 296.1 20.2 239 726-969 1-266 (331)
222 cd05047 PTKc_Tie Catalytic dom 100.0 2.6E-31 5.6E-36 288.4 18.7 236 732-974 1-269 (270)
223 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-31 3.1E-36 298.4 17.0 226 732-964 1-249 (327)
224 PTZ00036 glycogen synthase kin 100.0 2.2E-31 4.7E-36 307.7 19.1 233 725-969 65-351 (440)
225 PF00069 Pkinase: Protein kina 100.0 1.7E-31 3.6E-36 288.1 16.9 234 728-968 1-256 (260)
226 cd06637 STKc_TNIK Catalytic do 100.0 1.9E-31 4.2E-36 289.8 17.5 239 723-968 3-268 (272)
227 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-31 3E-36 290.1 16.2 236 726-968 9-264 (267)
228 cd06619 PKc_MKK5 Catalytic dom 100.0 2.6E-31 5.7E-36 289.8 17.8 231 726-969 1-253 (279)
229 cd06612 STKc_MST1_2 Catalytic 100.0 2.8E-31 6.1E-36 285.7 17.8 235 726-968 3-252 (256)
230 KOG0610 Putative serine/threon 100.0 1.2E-31 2.6E-36 280.1 14.2 239 726-968 77-391 (459)
231 cd06615 PKc_MEK Catalytic doma 100.0 3.9E-31 8.4E-36 292.7 19.4 236 726-970 1-288 (308)
232 cd05623 STKc_MRCK_alpha Cataly 100.0 4.1E-31 8.9E-36 295.6 19.6 239 726-969 1-266 (332)
233 cd05046 PTK_CCK4 Pseudokinase 100.0 6.4E-31 1.4E-35 286.2 20.5 241 726-971 5-274 (275)
234 cd05586 STKc_Sck1_like Catalyt 100.0 2.9E-31 6.3E-36 296.8 18.2 224 734-964 1-244 (330)
235 PHA03207 serine/threonine kina 100.0 2.2E-31 4.9E-36 304.2 17.5 234 725-969 91-375 (392)
236 cd05630 STKc_GRK6 Catalytic do 100.0 2.5E-31 5.5E-36 290.7 17.2 234 728-968 2-260 (285)
237 cd05042 PTKc_Aatyk Catalytic d 100.0 4.5E-31 9.8E-36 286.4 18.8 234 733-971 2-268 (269)
238 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.2E-31 1.6E-35 284.5 20.4 237 727-968 1-263 (267)
239 cd06638 STKc_myosinIIIA Cataly 100.0 4.6E-31 1E-35 289.1 18.8 247 716-969 8-283 (286)
240 cd06631 STKc_YSK4 Catalytic do 100.0 3.8E-31 8.3E-36 286.3 17.9 237 727-968 1-261 (265)
241 cd08221 STKc_Nek9 Catalytic do 100.0 8.3E-31 1.8E-35 282.1 20.4 237 727-969 1-253 (256)
242 cd05632 STKc_GRK5 Catalytic do 100.0 5.9E-31 1.3E-35 287.9 19.3 235 728-969 2-261 (285)
243 cd06655 STKc_PAK2 Catalytic do 100.0 3.5E-31 7.7E-36 291.1 17.6 235 726-968 19-268 (296)
244 PHA03209 serine/threonine kina 100.0 3.2E-31 7E-36 299.1 17.6 188 724-925 64-252 (357)
245 cd05044 PTKc_c-ros Catalytic d 100.0 4.5E-31 9.8E-36 286.4 17.9 237 732-972 1-269 (269)
246 cd06640 STKc_MST4 Catalytic do 100.0 8.5E-31 1.8E-35 285.5 20.1 235 727-969 5-253 (277)
247 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.2E-31 1.3E-35 290.3 19.2 236 726-968 6-285 (301)
248 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.9E-31 1.5E-35 283.2 19.1 227 732-970 1-258 (259)
249 KOG1025 Epidermal growth facto 100.0 2.9E-31 6.2E-36 295.9 16.3 245 729-978 699-962 (1177)
250 cd07861 STKc_CDK1_euk Catalyti 100.0 7.6E-31 1.6E-35 287.3 19.4 235 727-968 1-281 (285)
251 cd07863 STKc_CDK4 Catalytic do 100.0 9E-31 2E-35 287.1 19.7 234 727-968 1-284 (288)
252 cd06609 STKc_MST3_like Catalyt 100.0 8E-31 1.7E-35 285.3 19.1 235 726-968 1-250 (274)
253 cd07874 STKc_JNK3 Catalytic do 100.0 5.6E-31 1.2E-35 297.6 18.2 235 724-969 15-311 (355)
254 smart00219 TyrKc Tyrosine kina 100.0 1.6E-30 3.5E-35 280.0 21.0 237 729-970 2-258 (258)
255 cd07875 STKc_JNK1 Catalytic do 100.0 9.4E-31 2E-35 296.8 19.9 235 724-969 22-318 (364)
256 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.5E-31 1.2E-35 288.1 16.5 237 726-970 5-267 (284)
257 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.1E-31 8.9E-36 288.0 15.4 235 727-969 5-253 (277)
258 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.5E-31 1.4E-35 287.9 16.9 237 726-969 1-262 (286)
259 cd08223 STKc_Nek4 Catalytic do 100.0 2E-30 4.3E-35 279.3 20.5 237 727-969 1-254 (257)
260 cd05083 PTKc_Chk Catalytic dom 100.0 1.5E-30 3.2E-35 279.8 19.2 234 726-972 6-253 (254)
261 KOG0584 Serine/threonine prote 100.0 1.2E-31 2.7E-36 294.3 10.7 229 731-968 45-295 (632)
262 PTZ00284 protein kinase; Provi 100.0 9E-31 2E-35 306.3 18.8 236 721-968 124-437 (467)
263 cd07868 STKc_CDK8 Catalytic do 100.0 1.6E-30 3.5E-35 289.3 19.8 231 731-968 6-313 (317)
264 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.8E-30 4E-35 284.3 19.9 236 726-968 1-282 (286)
265 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.1E-30 4.4E-35 280.8 19.9 239 726-968 1-263 (267)
266 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-30 3.7E-35 279.7 19.0 237 727-969 1-253 (256)
267 PTZ00266 NIMA-related protein 100.0 7.4E-31 1.6E-35 314.2 17.6 242 723-968 10-294 (1021)
268 cd07841 STKc_CDK7 Catalytic do 100.0 2E-30 4.3E-35 286.0 19.7 236 727-969 1-282 (298)
269 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-30 3.1E-35 293.0 18.9 235 723-969 12-298 (343)
270 cd07832 STKc_CCRK Catalytic do 100.0 2.4E-30 5.2E-35 283.5 20.1 236 727-968 1-281 (286)
271 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-30 3.8E-35 281.5 18.8 234 733-971 2-267 (268)
272 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.1E-30 4.5E-35 281.7 19.3 237 727-968 2-268 (272)
273 cd06632 STKc_MEKK1_plant Catal 100.0 2.5E-30 5.5E-35 278.6 19.8 234 727-968 1-254 (258)
274 cd06651 STKc_MEKK3 Catalytic d 100.0 3.1E-30 6.7E-35 279.3 20.4 237 726-968 2-260 (266)
275 cd08528 STKc_Nek10 Catalytic d 100.0 3.5E-30 7.6E-35 279.4 20.6 238 727-971 1-268 (269)
276 cd06658 STKc_PAK5 Catalytic do 100.0 7.3E-31 1.6E-35 288.0 15.4 234 728-969 24-272 (292)
277 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-30 2.9E-35 290.9 17.8 234 731-968 3-306 (327)
278 cd07839 STKc_CDK5 Catalytic do 100.0 6.2E-31 1.3E-35 287.8 14.7 235 727-968 1-280 (284)
279 KOG4645 MAPKKK (MAP kinase kin 100.0 8.1E-32 1.7E-36 315.1 7.6 240 724-968 1233-1493(1509)
280 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-30 4E-35 283.7 17.9 245 717-968 7-278 (282)
281 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.7E-30 8E-35 279.9 20.2 242 728-973 1-272 (273)
282 cd07844 STKc_PCTAIRE_like Cata 100.0 3.6E-30 7.9E-35 282.8 20.3 236 726-968 5-287 (291)
283 KOG4717 Serine/threonine prote 100.0 7.1E-31 1.5E-35 278.3 13.6 236 727-969 19-270 (864)
284 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.4E-30 3E-35 285.4 16.5 236 726-968 1-282 (286)
285 KOG1035 eIF-2alpha kinase GCN2 100.0 2.3E-31 4.9E-36 310.1 10.7 241 723-968 476-870 (1351)
286 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.7E-30 1E-34 281.8 20.8 238 724-968 3-287 (291)
287 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-30 2.4E-35 282.7 15.4 235 727-969 2-257 (265)
288 cd05609 STKc_MAST Catalytic do 100.0 2.5E-30 5.4E-35 286.0 18.4 242 726-972 1-273 (305)
289 cd06639 STKc_myosinIIIB Cataly 100.0 2.2E-30 4.8E-35 284.4 17.8 246 716-968 12-286 (291)
290 cd06659 STKc_PAK6 Catalytic do 100.0 8.7E-31 1.9E-35 288.2 14.5 231 731-969 26-271 (297)
291 cd06641 STKc_MST3 Catalytic do 100.0 5E-30 1.1E-34 279.5 20.1 235 727-969 5-253 (277)
292 cd06630 STKc_MEKK1 Catalytic d 100.0 2.9E-30 6.2E-35 279.9 17.5 237 727-968 1-263 (268)
293 cd06607 STKc_TAO Catalytic dom 100.0 5.9E-30 1.3E-34 283.2 20.3 233 726-969 15-267 (307)
294 cd06647 STKc_PAK_I Catalytic d 100.0 3.3E-30 7.2E-35 283.0 18.0 236 726-969 19-269 (293)
295 cd07867 STKc_CDC2L6 Catalytic 100.0 3.8E-30 8.1E-35 286.4 18.6 231 731-968 6-313 (317)
296 cd05580 STKc_PKA Catalytic dom 100.0 3.8E-30 8.3E-35 282.3 18.4 232 726-967 1-252 (290)
297 cd06648 STKc_PAK_II Catalytic 100.0 3.2E-30 6.9E-35 282.1 17.6 234 727-968 20-268 (285)
298 cd05122 PKc_STE Catalytic doma 100.0 5.7E-30 1.2E-34 274.5 19.1 235 727-968 1-250 (253)
299 cd06608 STKc_myosinIII_like Ca 100.0 4.7E-30 1E-34 279.2 18.4 238 724-968 4-271 (275)
300 cd06623 PKc_MAPKK_plant_like C 100.0 6.2E-30 1.3E-34 276.6 19.2 237 726-969 1-256 (264)
301 cd07843 STKc_CDC2L1 Catalytic 100.0 4.5E-30 9.6E-35 282.4 18.3 236 726-968 5-289 (293)
302 cd06652 STKc_MEKK2 Catalytic d 100.0 5.9E-30 1.3E-34 277.0 18.9 237 726-968 2-260 (265)
303 KOG0986 G protein-coupled rece 100.0 3.7E-31 8.1E-36 277.8 9.1 232 725-963 184-435 (591)
304 cd06626 STKc_MEKK4 Catalytic d 100.0 5.1E-30 1.1E-34 277.3 18.2 237 727-968 1-260 (264)
305 cd08220 STKc_Nek8 Catalytic do 100.0 6.5E-30 1.4E-34 275.0 19.0 235 727-968 1-252 (256)
306 cd06614 STKc_PAK Catalytic dom 100.0 6.6E-30 1.4E-34 279.9 19.2 238 724-968 17-269 (286)
307 cd08217 STKc_Nek2 Catalytic do 100.0 9.7E-30 2.1E-34 275.1 20.3 240 727-969 1-262 (265)
308 cd07833 STKc_CDKL Catalytic do 100.0 3.9E-30 8.5E-35 282.0 17.4 237 726-968 1-284 (288)
309 cd06917 STKc_NAK1_like Catalyt 100.0 6.8E-30 1.5E-34 278.5 19.0 235 727-969 2-255 (277)
310 KOG0586 Serine/threonine prote 100.0 3.2E-30 6.8E-35 283.2 15.9 238 724-969 54-306 (596)
311 cd07860 STKc_CDK2_3 Catalytic 100.0 5.3E-30 1.2E-34 280.4 17.7 235 727-968 1-280 (284)
312 KOG4236 Serine/threonine prote 100.0 2.3E-30 4.9E-35 275.2 13.8 230 731-967 569-817 (888)
313 KOG0596 Dual specificity; seri 100.0 2E-30 4.3E-35 278.9 13.0 239 724-968 359-626 (677)
314 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.6E-30 2.1E-34 278.2 18.5 235 726-968 1-260 (283)
315 cd05574 STKc_phototropin_like 100.0 1.1E-29 2.4E-34 282.5 19.0 239 726-968 1-288 (316)
316 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-29 2.6E-34 278.0 18.9 235 726-968 1-265 (287)
317 cd05578 STKc_Yank1 Catalytic d 100.0 2.9E-30 6.2E-35 278.3 13.6 233 727-967 1-253 (258)
318 KOG4250 TANK binding protein k 100.0 1.8E-30 3.9E-35 288.6 12.1 242 728-976 15-313 (732)
319 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-29 3.5E-34 276.6 18.9 235 727-968 1-280 (284)
320 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-29 3.1E-34 278.6 18.3 236 726-968 1-290 (295)
321 cd06606 STKc_MAPKKK Catalytic 100.0 1.9E-29 4.2E-34 271.6 18.7 237 727-968 1-256 (260)
322 cd08215 STKc_Nek Catalytic dom 100.0 1.9E-29 4.1E-34 271.5 18.6 236 727-968 1-254 (258)
323 cd06627 STKc_Cdc7_like Catalyt 100.0 4E-29 8.6E-34 268.5 20.8 235 727-968 1-250 (254)
324 KOG0690 Serine/threonine prote 100.0 6.3E-31 1.4E-35 264.4 6.2 230 725-961 167-411 (516)
325 KOG0200 Fibroblast/platelet-de 100.0 9E-30 2E-34 302.8 17.2 248 724-975 294-581 (609)
326 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-29 2.5E-34 273.3 16.4 237 727-969 1-254 (257)
327 cd06635 STKc_TAO1 Catalytic do 100.0 3.6E-29 7.8E-34 278.2 20.8 233 728-971 27-279 (317)
328 PHA03210 serine/threonine kina 100.0 9E-30 1.9E-34 298.7 16.5 239 724-968 146-453 (501)
329 cd05572 STKc_cGK_PKG Catalytic 100.0 3.9E-29 8.4E-34 270.1 20.2 227 734-968 1-251 (262)
330 KOG0612 Rho-associated, coiled 100.0 6.2E-31 1.3E-35 303.9 6.4 207 719-931 68-283 (1317)
331 cd07845 STKc_CDK10 Catalytic d 100.0 2.5E-29 5.3E-34 278.6 18.9 238 725-969 6-290 (309)
332 cd07840 STKc_CDK9_like Catalyt 100.0 3.5E-29 7.5E-34 274.3 19.7 235 728-968 1-283 (287)
333 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-29 2.4E-34 274.6 15.3 232 734-970 1-255 (265)
334 cd07850 STKc_JNK Catalytic dom 100.0 3.3E-29 7.1E-34 282.9 19.7 235 724-969 14-311 (353)
335 KOG0983 Mitogen-activated prot 100.0 4.6E-30 9.9E-35 253.0 10.8 232 730-968 96-348 (391)
336 cd07831 STKc_MOK Catalytic dom 100.0 4.6E-29 9.9E-34 272.7 19.9 232 728-968 1-278 (282)
337 cd07865 STKc_CDK9 Catalytic do 100.0 4.3E-29 9.4E-34 276.9 19.9 239 725-968 11-306 (310)
338 KOG0662 Cyclin-dependent kinas 100.0 1.1E-29 2.4E-34 234.8 12.4 234 727-968 3-282 (292)
339 cd07852 STKc_MAPK15 Catalytic 100.0 2.8E-29 6E-34 281.8 18.1 239 724-969 5-295 (337)
340 cd07842 STKc_CDK8_like Catalyt 100.0 2.6E-29 5.6E-34 279.6 17.7 237 727-968 1-312 (316)
341 cd06616 PKc_MKK4 Catalytic dom 100.0 1.3E-29 2.8E-34 277.9 14.9 236 727-969 5-267 (288)
342 cd07849 STKc_ERK1_2_like Catal 100.0 2.5E-29 5.4E-34 281.9 17.4 244 725-975 4-300 (336)
343 cd06657 STKc_PAK4 Catalytic do 100.0 1.7E-29 3.7E-34 277.1 15.6 229 732-968 26-269 (292)
344 cd07864 STKc_CDK12 Catalytic d 100.0 4.8E-29 1E-33 275.5 19.0 240 723-968 4-298 (302)
345 PLN00009 cyclin-dependent kina 100.0 5.4E-29 1.2E-33 273.9 19.3 236 726-968 2-283 (294)
346 cd05577 STKc_GRK Catalytic dom 100.0 2.7E-29 5.9E-34 273.6 16.6 228 734-968 1-253 (277)
347 cd07835 STKc_CDK1_like Catalyt 100.0 5.8E-29 1.2E-33 272.1 19.2 234 728-968 1-279 (283)
348 cd05633 STKc_GRK3 Catalytic do 100.0 3.6E-29 7.8E-34 272.8 16.9 228 733-969 1-255 (279)
349 cd08530 STKc_CNK2-like Catalyt 100.0 3.6E-29 7.8E-34 269.2 16.6 234 727-968 1-252 (256)
350 cd05118 STKc_CMGC Catalytic do 100.0 5.9E-29 1.3E-33 271.9 18.0 234 728-968 1-279 (283)
351 PHA03390 pk1 serine/threonine- 100.0 9.8E-29 2.1E-33 267.5 18.9 235 718-968 6-261 (267)
352 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-28 3.1E-33 266.0 19.7 237 726-968 2-260 (264)
353 PHA02882 putative serine/threo 100.0 9.8E-29 2.1E-33 271.5 18.7 240 725-970 11-293 (294)
354 KOG0666 Cyclin C-dependent kin 100.0 5.2E-30 1.1E-34 256.9 7.6 242 724-970 22-338 (438)
355 cd07855 STKc_ERK5 Catalytic do 100.0 3.6E-29 7.8E-34 280.4 15.2 239 725-969 4-294 (334)
356 cd07834 STKc_MAPK Catalytic do 100.0 7.1E-29 1.5E-33 277.8 17.6 248 727-980 1-302 (330)
357 cd08226 PK_STRAD_beta Pseudoki 100.0 1.1E-28 2.4E-33 275.7 18.8 239 733-975 5-316 (328)
358 cd05581 STKc_PDK1 Catalytic do 100.0 5.2E-29 1.1E-33 271.9 15.8 238 726-968 1-276 (280)
359 cd05583 STKc_MSK_N N-terminal 100.0 5.1E-29 1.1E-33 273.2 15.6 240 727-972 1-266 (288)
360 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-28 3.2E-33 272.1 19.3 234 727-971 16-269 (308)
361 cd06633 STKc_TAO3 Catalytic do 100.0 2.2E-28 4.7E-33 271.3 20.6 231 728-969 23-273 (313)
362 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-28 2.3E-33 274.3 18.1 234 731-969 7-295 (314)
363 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-28 2.4E-33 266.3 17.6 228 732-970 2-249 (260)
364 cd07830 STKc_MAK_like Catalyti 100.0 1.5E-28 3.2E-33 268.8 18.7 233 728-968 1-279 (283)
365 cd06618 PKc_MKK7 Catalytic dom 100.0 6.6E-29 1.4E-33 273.4 16.0 238 725-970 14-274 (296)
366 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.8E-29 1.3E-33 279.0 15.7 243 725-975 4-299 (337)
367 cd05613 STKc_MSK1_N N-terminal 100.0 1.8E-28 3.9E-33 269.1 19.0 236 727-968 1-267 (290)
368 PTZ00024 cyclin-dependent prot 100.0 1.8E-28 4E-33 274.9 19.2 237 726-968 8-312 (335)
369 KOG0607 MAP kinase-interacting 100.0 3.6E-29 7.8E-34 251.6 11.6 232 732-968 84-360 (463)
370 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-28 3.2E-33 272.8 17.7 239 725-968 7-307 (311)
371 cd07879 STKc_p38delta_MAPK13 C 100.0 1.7E-28 3.6E-33 275.7 17.9 238 725-975 14-305 (342)
372 cd07838 STKc_CDK4_6_like Catal 100.0 4E-28 8.7E-33 265.9 20.5 233 728-968 1-283 (287)
373 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.9E-28 4.2E-33 273.2 17.4 236 722-969 6-288 (328)
374 cd05606 STKc_beta_ARK Catalyti 100.0 2.2E-28 4.7E-33 266.5 17.1 227 733-968 1-254 (278)
375 KOG0587 Traf2- and Nck-interac 100.0 3.4E-28 7.4E-33 275.3 18.7 243 719-968 12-281 (953)
376 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.2E-28 9.1E-33 272.7 19.5 242 716-969 7-300 (345)
377 KOG0604 MAP kinase-activated p 100.0 4E-29 8.8E-34 249.6 9.8 233 725-969 60-322 (400)
378 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.4E-28 7.4E-33 273.2 18.6 233 724-968 13-297 (343)
379 cd07829 STKc_CDK_like Catalyti 100.0 3.2E-28 7E-33 265.9 17.2 234 728-968 1-278 (282)
380 cd07857 STKc_MPK1 Catalytic do 100.0 5.2E-28 1.1E-32 270.7 18.9 236 727-968 1-291 (332)
381 cd08222 STKc_Nek11 Catalytic d 100.0 2E-28 4.4E-33 264.1 14.9 235 727-968 1-256 (260)
382 KOG1006 Mitogen-activated prot 100.0 7.4E-30 1.6E-34 250.8 2.9 235 728-969 66-327 (361)
383 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.6E-28 7.7E-33 273.0 16.3 237 725-968 4-299 (342)
384 KOG0696 Serine/threonine prote 100.0 6E-29 1.3E-33 257.4 8.4 232 724-962 347-594 (683)
385 cd07851 STKc_p38 Catalytic dom 100.0 4.2E-28 9.1E-33 272.6 15.1 233 724-968 13-297 (343)
386 cd05123 STKc_AGC Catalytic dom 100.0 5.3E-28 1.1E-32 259.2 15.1 225 734-965 1-240 (250)
387 KOG0669 Cyclin T-dependent kin 100.0 6.9E-30 1.5E-34 248.7 -0.2 239 726-969 17-315 (376)
388 cd05576 STKc_RPK118_like Catal 100.0 5.4E-28 1.2E-32 256.8 13.7 214 737-965 4-225 (237)
389 cd05610 STKc_MASTL Catalytic d 99.9 2.1E-27 4.5E-32 287.2 19.7 145 726-874 4-152 (669)
390 KOG0671 LAMMER dual specificit 99.9 9.9E-28 2.2E-32 248.5 12.5 233 725-968 88-405 (415)
391 KOG0603 Ribosomal protein S6 k 99.9 7.1E-28 1.5E-32 266.2 10.7 231 724-969 320-563 (612)
392 PLN03225 Serine/threonine-prot 99.9 4.6E-27 1E-31 276.8 16.0 237 724-969 130-450 (566)
393 KOG0608 Warts/lats-like serine 99.9 2.4E-27 5.2E-32 257.4 11.6 211 717-932 617-874 (1034)
394 KOG1027 Serine/threonine prote 99.9 2.8E-27 6E-32 266.8 12.1 230 728-968 511-766 (903)
395 PLN03224 probable serine/threo 99.9 1.1E-26 2.4E-31 266.1 16.8 240 724-968 143-499 (507)
396 KOG0614 cGMP-dependent protein 99.9 1.6E-28 3.5E-33 260.7 1.5 229 726-962 420-665 (732)
397 KOG0695 Serine/threonine prote 99.9 2.2E-27 4.7E-32 239.6 8.2 231 724-961 248-502 (593)
398 KOG1151 Tousled-like protein k 99.9 3E-27 6.5E-32 246.6 9.1 241 725-968 462-740 (775)
399 KOG1024 Receptor-like protein 99.9 6E-27 1.3E-31 241.6 11.2 255 719-977 277-559 (563)
400 smart00220 S_TKc Serine/Threon 99.9 2.7E-26 5.8E-31 244.3 16.6 223 738-968 1-240 (244)
401 KOG0576 Mitogen-activated prot 99.9 4.5E-27 9.6E-32 258.1 4.2 237 725-968 14-270 (829)
402 cd00180 PKc Catalytic domain o 99.9 7.6E-25 1.7E-29 227.4 19.2 210 734-969 1-214 (215)
403 KOG4237 Extracellular matrix p 99.9 1.7E-27 3.7E-32 246.6 -2.5 390 222-619 71-498 (498)
404 KOG0984 Mitogen-activated prot 99.9 1E-25 2.2E-30 213.9 8.4 199 726-931 46-254 (282)
405 KOG0664 Nemo-like MAPK-related 99.9 1.7E-26 3.7E-31 227.3 2.7 197 728-931 55-260 (449)
406 KOG0668 Casein kinase II, alph 99.9 9.6E-26 2.1E-30 217.0 7.5 240 724-977 36-332 (338)
407 KOG4237 Extracellular matrix p 99.9 8.7E-27 1.9E-31 241.5 -0.2 400 100-523 70-498 (498)
408 KOG1152 Signal transduction se 99.9 2.6E-25 5.6E-30 240.3 10.3 195 725-928 560-768 (772)
409 PLN03210 Resistant to P. syrin 99.9 1.1E-23 2.4E-28 269.1 24.7 314 170-523 589-903 (1153)
410 KOG0665 Jun-N-terminal kinase 99.9 7.7E-25 1.7E-29 221.9 9.1 231 726-968 17-309 (369)
411 PLN03210 Resistant to P. syrin 99.9 3.7E-23 8E-28 264.4 23.0 337 261-620 553-904 (1153)
412 KOG0670 U4/U6-associated splic 99.9 1.2E-23 2.6E-28 224.4 10.8 235 724-968 430-745 (752)
413 PRK09188 serine/threonine prot 99.9 4.8E-23 1E-27 226.3 15.8 183 723-920 15-218 (365)
414 PRK15387 E3 ubiquitin-protein 99.9 6.2E-23 1.3E-27 242.8 15.8 263 267-604 202-464 (788)
415 PRK15387 E3 ubiquitin-protein 99.9 6.6E-23 1.4E-27 242.6 15.9 263 172-509 203-465 (788)
416 KOG1290 Serine/threonine prote 99.9 8.6E-23 1.9E-27 217.3 14.8 131 725-859 77-221 (590)
417 PRK15370 E3 ubiquitin-protein 99.9 8.5E-23 1.8E-27 243.6 15.1 341 21-430 54-428 (754)
418 KOG1345 Serine/threonine kinas 99.9 8.2E-23 1.8E-27 201.9 10.8 234 725-970 23-285 (378)
419 smart00221 STYKc Protein kinas 99.9 3.4E-22 7.3E-27 210.2 16.2 198 728-930 1-201 (225)
420 KOG1165 Casein kinase (serine/ 99.9 3.9E-21 8.6E-26 195.4 17.2 247 724-977 26-303 (449)
421 KOG1167 Serine/threonine prote 99.9 6.7E-22 1.5E-26 208.6 12.1 193 724-926 34-275 (418)
422 KOG1163 Casein kinase (serine/ 99.9 5.1E-21 1.1E-25 186.2 15.5 245 724-975 13-286 (341)
423 PRK15370 E3 ubiquitin-protein 99.9 1.4E-21 3.1E-26 233.2 11.6 260 62-381 169-428 (754)
424 cd05147 RIO1_euk RIO kinase fa 99.8 5.4E-21 1.2E-25 193.6 12.1 140 731-876 2-167 (190)
425 KOG1164 Casein kinase (serine/ 99.8 3.7E-20 8.1E-25 205.1 18.6 245 727-976 19-300 (322)
426 PLN00181 protein SPA1-RELATED; 99.8 1.6E-21 3.4E-26 242.4 7.5 186 778-968 28-264 (793)
427 KOG0195 Integrin-linked kinase 99.8 3.5E-21 7.6E-26 189.9 2.0 234 731-974 195-447 (448)
428 cd05145 RIO1_like RIO kinase f 99.8 3.1E-19 6.7E-24 181.7 14.7 140 731-877 2-168 (190)
429 PRK12274 serine/threonine prot 99.8 4.1E-19 8.9E-24 176.7 13.0 187 729-931 5-209 (218)
430 PRK10359 lipopolysaccharide co 99.8 4.4E-19 9.5E-24 180.9 10.7 169 724-921 29-214 (232)
431 cd00116 LRR_RI Leucine-rich re 99.8 2E-20 4.3E-25 208.4 0.8 277 77-380 2-319 (319)
432 smart00750 KIND kinase non-cat 99.8 6.2E-19 1.3E-23 177.9 11.4 151 807-976 1-172 (176)
433 PRK10345 hypothetical protein; 99.8 4E-18 8.8E-23 173.9 14.3 137 728-873 4-156 (210)
434 cd00116 LRR_RI Leucine-rich re 99.8 4E-20 8.6E-25 206.0 -0.9 285 150-476 3-318 (319)
435 KOG0590 Checkpoint kinase and 99.7 1.3E-18 2.7E-23 204.4 8.7 233 730-968 322-584 (601)
436 COG0515 SPS1 Serine/threonine 99.7 2.4E-17 5.1E-22 184.4 17.9 236 728-969 2-275 (384)
437 KOG0617 Ras suppressor protein 99.7 7.7E-20 1.7E-24 168.8 -2.8 163 92-285 28-191 (264)
438 KOG0617 Ras suppressor protein 99.7 1.3E-19 2.8E-24 167.3 -2.8 161 439-605 31-192 (264)
439 KOG1166 Mitotic checkpoint ser 99.7 7.6E-18 1.6E-22 200.6 10.8 244 721-976 693-956 (974)
440 smart00090 RIO RIO-like kinase 99.7 3.9E-17 8.4E-22 171.2 13.1 147 721-876 23-198 (237)
441 PRK14879 serine/threonine prot 99.7 1.1E-16 2.5E-21 166.5 13.9 134 732-875 2-143 (211)
442 cd05144 RIO2_C RIO kinase fami 99.7 1.4E-16 3E-21 163.8 13.3 143 721-877 10-176 (198)
443 PRK09605 bifunctional UGMP fam 99.7 2.8E-16 6.1E-21 186.1 16.8 138 724-875 331-476 (535)
444 TIGR03724 arch_bud32 Kae1-asso 99.7 2.3E-16 4.9E-21 162.6 12.5 130 733-875 1-138 (199)
445 PLN03150 hypothetical protein; 99.7 1.9E-16 4.2E-21 189.2 12.8 151 26-181 368-526 (623)
446 KOG0603 Ribosomal protein S6 k 99.7 3.3E-17 7.1E-22 182.2 3.0 217 734-963 2-232 (612)
447 KOG1240 Protein kinase contain 99.6 7E-17 1.5E-21 187.6 3.1 238 727-971 24-293 (1431)
448 cd05120 APH_ChoK_like Aminogly 99.6 2.3E-15 5E-20 147.5 12.6 134 731-875 3-138 (155)
449 KOG1023 Natriuretic peptide re 99.6 8.6E-16 1.9E-20 171.7 9.1 198 776-976 1-227 (484)
450 cd05119 RIO RIO kinase family, 99.6 6.6E-15 1.4E-19 150.0 12.4 136 731-877 2-165 (187)
451 PF14531 Kinase-like: Kinase-l 99.6 3.1E-15 6.7E-20 157.5 9.8 225 726-960 12-288 (288)
452 PRK01723 3-deoxy-D-manno-octul 99.6 3.9E-14 8.5E-19 148.9 14.2 136 731-876 36-192 (239)
453 KOG4158 BRPK/PTEN-induced prot 99.5 3.1E-14 6.7E-19 148.7 10.0 184 780-970 274-511 (598)
454 PLN03150 hypothetical protein; 99.5 4.1E-14 9E-19 169.2 9.1 118 538-657 419-538 (623)
455 KOG0532 Leucine-rich repeat (L 99.5 3.4E-15 7.4E-20 162.6 -2.1 177 416-625 74-250 (722)
456 KOG1033 eIF-2alpha kinase PEK/ 99.5 1.3E-14 2.8E-19 158.7 1.7 163 795-966 329-509 (516)
457 TIGR01982 UbiB 2-polyprenylphe 99.5 2.7E-13 5.8E-18 155.0 12.4 141 731-877 122-308 (437)
458 KOG0606 Microtubule-associated 99.4 2.9E-14 6.3E-19 166.4 2.9 196 726-963 83-306 (1205)
459 KOG0532 Leucine-rich repeat (L 99.4 7.2E-15 1.6E-19 160.2 -2.3 183 94-287 72-254 (722)
460 KOG0590 Checkpoint kinase and 99.4 3.5E-14 7.5E-19 167.1 0.6 239 726-968 20-285 (601)
461 COG4886 Leucine-rich repeat (L 99.4 5.3E-13 1.1E-17 153.1 7.3 196 78-308 98-294 (394)
462 COG4886 Leucine-rich repeat (L 99.3 1.6E-12 3.5E-17 149.1 8.7 201 175-390 98-299 (394)
463 PRK04750 ubiB putative ubiquin 99.3 9.5E-12 2.1E-16 143.5 9.8 147 726-878 120-316 (537)
464 cd05151 ChoK Choline Kinase (C 99.2 2.5E-11 5.5E-16 121.4 10.4 128 731-875 3-136 (170)
465 KOG1909 Ran GTPase-activating 99.2 4E-13 8.6E-18 139.2 -3.8 229 192-454 28-283 (382)
466 KOG1259 Nischarin, modulator o 99.2 3.4E-12 7.3E-17 128.8 2.1 136 485-626 280-416 (490)
467 cd05146 RIO3_euk RIO kinase fa 99.2 2.3E-10 4.9E-15 114.6 15.1 137 731-876 2-174 (197)
468 KOG1266 Protein kinase [Signal 99.2 1.2E-11 2.6E-16 126.8 5.6 195 774-970 119-332 (458)
469 COG3642 Mn2+-dependent serine/ 99.2 2.4E-10 5.1E-15 109.7 12.4 131 732-875 2-140 (204)
470 KOG0601 Cyclin-dependent kinas 99.2 3.7E-11 8E-16 134.7 6.9 236 727-968 115-378 (524)
471 KOG1243 Protein kinase [Genera 99.2 2.2E-10 4.8E-15 129.3 12.9 215 747-974 34-264 (690)
472 KOG3207 Beta-tubulin folding c 99.1 2E-11 4.3E-16 130.0 1.7 215 192-431 119-340 (505)
473 KOG3207 Beta-tubulin folding c 99.1 9.7E-12 2.1E-16 132.3 -1.0 210 119-329 119-340 (505)
474 KOG1259 Nischarin, modulator o 99.1 4.7E-11 1E-15 120.6 3.6 131 440-600 283-414 (490)
475 KOG3087 Serine/threonine prote 99.1 1.3E-09 2.8E-14 103.8 12.5 142 730-875 11-165 (229)
476 cd05154 ACAD10_11_like Acyl-Co 99.1 1.3E-09 2.7E-14 114.4 13.4 142 732-875 4-206 (223)
477 KOG0531 Protein phosphatase 1, 99.1 2.2E-11 4.8E-16 139.7 -0.2 215 394-622 73-290 (414)
478 KOG1909 Ran GTPase-activating 99.1 1E-11 2.2E-16 128.8 -2.9 138 242-380 157-310 (382)
479 KOG0531 Protein phosphatase 1, 99.0 1.9E-11 4.1E-16 140.3 -2.0 247 336-626 69-322 (414)
480 PF14580 LRR_9: Leucine-rich r 99.0 1.6E-10 3.6E-15 113.3 4.8 102 512-617 41-148 (175)
481 PF14580 LRR_9: Leucine-rich r 99.0 2.5E-10 5.4E-15 112.0 5.4 61 191-255 16-77 (175)
482 KOG0601 Cyclin-dependent kinas 99.0 3E-10 6.4E-15 127.5 6.5 242 723-974 262-519 (524)
483 PF01163 RIO1: RIO1 family; I 99.0 3.9E-09 8.4E-14 105.5 11.9 126 741-876 1-156 (188)
484 PF08263 LRRNT_2: Leucine rich 98.9 6.2E-10 1.3E-14 82.1 3.5 40 29-69 2-43 (43)
485 KOG4658 Apoptotic ATPase [Sign 98.9 8.6E-10 1.9E-14 134.8 5.0 93 160-253 561-653 (889)
486 PRK15123 lipopolysaccharide co 98.9 3.1E-08 6.7E-13 105.3 14.3 141 731-875 27-194 (268)
487 KOG4658 Apoptotic ATPase [Sign 98.8 6.5E-09 1.4E-13 127.2 8.0 277 194-503 523-808 (889)
488 PF13855 LRR_8: Leucine rich r 98.8 3.7E-09 7.9E-14 85.3 3.6 59 538-596 2-60 (61)
489 PF13855 LRR_8: Leucine rich r 98.8 8E-09 1.7E-13 83.3 5.4 60 466-525 2-61 (61)
490 COG0478 RIO-like serine/threon 98.7 5.4E-08 1.2E-12 99.3 10.8 135 728-875 93-251 (304)
491 KOG4579 Leucine-rich repeat (L 98.6 5.1E-09 1.1E-13 94.4 -1.0 113 513-628 53-165 (177)
492 KOG1859 Leucine-rich repeat pr 98.6 2.8E-09 6.1E-14 120.0 -4.9 178 410-597 102-291 (1096)
493 PF06293 Kdo: Lipopolysacchari 98.5 5.3E-07 1.1E-11 92.9 11.9 107 766-876 55-171 (206)
494 KOG0606 Microtubule-associated 98.5 1.5E-08 3.2E-13 119.6 0.3 236 724-964 802-1084(1205)
495 COG0661 AarF Predicted unusual 98.5 2.9E-07 6.3E-12 105.9 10.8 140 732-877 131-316 (517)
496 KOG3741 Poly(A) ribonuclease s 98.5 1.9E-06 4.1E-11 94.9 15.4 208 739-970 289-522 (655)
497 KOG1859 Leucine-rich repeat pr 98.5 3.2E-09 7E-14 119.5 -6.5 179 385-574 102-292 (1096)
498 PRK09902 hypothetical protein; 98.5 2.4E-06 5.3E-11 85.7 14.0 138 734-875 26-179 (216)
499 COG5238 RNA1 Ran GTPase-activa 98.4 1.3E-08 2.7E-13 102.1 -3.8 134 236-381 86-227 (388)
500 KOG4579 Leucine-rich repeat (L 98.4 2.2E-08 4.7E-13 90.4 -3.5 108 100-212 30-140 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.1e-115 Score=1106.81 Aligned_cols=892 Identities=32% Similarity=0.532 Sum_probs=706.1
Q ss_pred ccCChhHHHHHHHHHHhcccCCCCcccCCCCCCCCcceeeeEEEeCCCCeEEEEEecCCcccccCchhcccccccceecc
Q 001988 25 ASNISTDQQALLALKDHITYDPTNLLGTNWTSNASICSWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDL 104 (985)
Q Consensus 25 ~~~~~~~~~aLl~~k~~~~~~~~~~~~s~w~~~~~~c~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L 104 (985)
.+..+.|++||++||+++. ||.+.+.+ |+.+.+||.|.||+|+. +++|+.|||++++++|.+++.+..+++|+.|+|
T Consensus 24 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~-w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~L 100 (968)
T PLN00113 24 SMLHAEELELLLSFKSSIN-DPLKYLSN-WNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINL 100 (968)
T ss_pred cCCCHHHHHHHHHHHHhCC-CCcccCCC-CCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEEC
Confidence 3445789999999999995 78777766 98888999999999985 468999999999999999999999999999999
Q ss_pred cCCcCCCCCCcccc-cCCCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhccccceecccCcccc
Q 001988 105 SHNKLSSNIPSSIF-TMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFY 183 (985)
Q Consensus 105 ~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L~L~~n~l~ 183 (985)
++|+++|.+|..++ .+++|++|+|++|.++|.+|. ..+++|++|+|++|.+++.+|..+ +++++|++|+|++|.+.
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~-~~l~~L~~L~L~~n~l~ 177 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDI-GSFSSLKVLDLGGNVLV 177 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHH-hcCCCCCEEECccCccc
Confidence 99999999999887 899999999999999987775 346777778888877777777766 56777777777777777
Q ss_pred ccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCccccc
Q 001988 184 GKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIF 263 (985)
Q Consensus 184 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 263 (985)
+.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++++++|++|++++|++++.+|..+.
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 257 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG 257 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCce
Q 001988 264 NMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKL 343 (985)
Q Consensus 264 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 343 (985)
++++|++|+|++|++.+.+|..+. .+++|+.|+|++|++++.+|..+.++++|+.|++++|.+.+..|..++.+++
T Consensus 258 ~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~--- 333 (968)
T PLN00113 258 NLKNLQYLFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR--- 333 (968)
T ss_pred CCCCCCEEECcCCeeeccCchhHh-hccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCC---
Confidence 777777777777777766666553 5666666666666666666666666666666666666666655555555544
Q ss_pred EeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEE
Q 001988 344 FDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLS 423 (985)
Q Consensus 344 L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 423 (985)
|+.|++++|.+.+.+|..+..++ +|+.|++++|++++.+|..+..+++|+.|+
T Consensus 334 --------------------------L~~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~ 386 (968)
T PLN00113 334 --------------------------LQVLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLI 386 (968)
T ss_pred --------------------------CCEEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEE
Confidence 55555555555555666666655 677777777777777788888888888899
Q ss_pred ccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeee
Q 001988 424 LGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503 (985)
Q Consensus 424 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 503 (985)
+++|++.+.+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+
T Consensus 387 l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~ 466 (968)
T PLN00113 387 LFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFG 466 (968)
T ss_pred CcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeee
Confidence 99998888888888888899999999999988888888889999999999999998888888889999999999999988
Q ss_pred ecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhc
Q 001988 504 VIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGN 583 (985)
Q Consensus 504 ~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 583 (985)
.+|..+ ..++|+.|++++|++.+..|..+.++++|+.|+|++|++.+.+|..++++++|++|+|++|++++.+|..|.+
T Consensus 467 ~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 545 (968)
T PLN00113 467 GLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSE 545 (968)
T ss_pred ecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhC
Confidence 888765 4588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCeEecCCCcccCCCCccccccccccccccccccccCCCCCCCCCcccccccccCCccccCCCC-CCCCCCCCCCCC
Q 001988 584 MTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAESFMGNELLCGLPN-LQVPPCKHSQPR 662 (985)
Q Consensus 584 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~-~~~~~~~~~~~~ 662 (985)
+++|++|||++|++++.+|..+..+++|+.|++++|+++|.+|..+++.++...++.||+.+||.+. ...+||....
T Consensus 546 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~-- 623 (968)
T PLN00113 546 MPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR-- 623 (968)
T ss_pred cccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc--
Confidence 9999999999999999999999999999999999999999999999999999999999999999653 3456774321
Q ss_pred cccccccceehhHhhHhHHHHHHHHHHHHHhcCCCcc-ccC--c-cccc----cCCCcccccCHHHHHHHhcCccCCcee
Q 001988 663 AQHKSKKTILLLVIFLPLSTTLVIAVALALKRGKRGT-MLS--N-DIIL----SSQPTIRRFSYFELLRATDNFAENNII 734 (985)
Q Consensus 663 ~~~~s~~~~~i~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~--~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i 734 (985)
......++++++++++++++++++++.++|+++.. ... . +... ......+.+++.++ ...|...+.|
T Consensus 624 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i 698 (968)
T PLN00113 624 --KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVI 698 (968)
T ss_pred --ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHH---HhhCCcccEE
Confidence 11112223332222222222223333333332211 110 0 0000 00001112333333 3457788899
Q ss_pred eccCceeEEEEEE-cCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHHHh
Q 001988 735 GIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCL 813 (985)
Q Consensus 735 g~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 813 (985)
|+|+||.||+|+. .+++.||||+++..... ...|++++++++|||||+++++|.+.+..++||||+++|+|.+++
T Consensus 699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l 774 (968)
T PLN00113 699 SRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL 774 (968)
T ss_pred ccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHH
Confidence 9999999999986 48899999998644221 235688999999999999999999999999999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccccccc
Q 001988 814 HSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893 (985)
Q Consensus 814 ~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~ 893 (985)
+. ++|..+.+++.|+|+|++|||+.++++|+|||+||+||+++.++.+++. ||.+..... .....+|+.
T Consensus 775 ~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~ 843 (968)
T PLN00113 775 RN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSA 843 (968)
T ss_pred hc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCcccccc
Confidence 63 7899999999999999999976558899999999999999999988876 665543321 112358899
Q ss_pred cccccccccCccchhhhcccccccchhhhcccccccCcch-----------------------------hhhhHHHHHHH
Q 001988 894 YMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-----------------------------HFAAKEQCLLS 944 (985)
Q Consensus 894 y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-----------------------------~~~~~~~~~~~ 944 (985)
|||||++.+..++.++|| |++|++++|+++++.+..... .......+..+
T Consensus 844 y~aPE~~~~~~~~~~sDv-~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (968)
T PLN00113 844 YVAPETRETKDITEKSDI-YGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVE 922 (968)
T ss_pred ccCcccccCCCCCcccch-hhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHH
Confidence 999999999999999999 999999999999886642110 00112234567
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 945 IFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
+.+++.+||+.+|++||+|.|++++|+++.+..
T Consensus 923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 923 VMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 889999999999999999999999999987643
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-62 Score=625.23 Aligned_cols=518 Identities=35% Similarity=0.554 Sum_probs=404.1
Q ss_pred cccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccc-cCCccceeeeccccccCCCChhHhhhcccccee
Q 001988 97 SSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTF-NTSSILDIRLSKNKLSGKLPENICNHLRYLKHL 175 (985)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L 175 (985)
..++.|||++|.++|.+|..+..+++|++|+|++|+++|.+|..++ .+++|++|+|++|+++|.+|. +.+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 4688999999999999999999999999999988888766655444 556666666666666655554 235555666
Q ss_pred cccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCc
Q 001988 176 FLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255 (985)
Q Consensus 176 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 255 (985)
+|++|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|++.+.+|..++++++|++|+|++|+++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 66666555555555555556666666655555555555555555555555555555555555555555555555555555
Q ss_pred ccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcc
Q 001988 256 GVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAI 335 (985)
Q Consensus 256 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 335 (985)
+.+|..+.++++|++|++++|++++ .+|..++++++|+.|++++|++.+.+|..+
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~-------------------------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 280 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTG-------------------------PIPSSLGNLKNLQYLFLYQNKLSGPIPPSI 280 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceecc-------------------------ccChhHhCCCCCCEEECcCCeeeccCchhH
Confidence 5555555555555555555555554 444444445555555555555555555555
Q ss_pred cCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCC
Q 001988 336 GNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGN 415 (985)
Q Consensus 336 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~ 415 (985)
.++++|++|++++|++.+..+. .+.++++|++|++++|.+.+..|..+..++ +|+.|++++|.+++.+|..++.
T Consensus 281 ~~l~~L~~L~Ls~n~l~~~~p~-----~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~ 354 (968)
T PLN00113 281 FSLQKLISLDLSDNSLSGEIPE-----LVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNKFSGEIPKNLGK 354 (968)
T ss_pred hhccCcCEEECcCCeeccCCCh-----hHcCCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCCCcCcCChHHhC
Confidence 5555555555555555433222 245566777777777777777888888887 8999999999999999999999
Q ss_pred CCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEe
Q 001988 416 LSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLN 495 (985)
Q Consensus 416 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 495 (985)
+++|+.|++++|++++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++++.+|..|.++++|+.|+
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 434 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434 (968)
T ss_pred CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceecc
Q 001988 496 LGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEG 575 (985)
Q Consensus 496 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 575 (985)
+++|++++.+|..+..+++|+.|++++|++.+..|..+ ..++|+.|++++|++++.+|..|.++++|+.|+|++|++++
T Consensus 435 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 513 (968)
T PLN00113 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSG 513 (968)
T ss_pred CcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCccee
Confidence 99999999999999999999999999999998888765 45899999999999999999999999999999999999999
Q ss_pred chhhhhhcccccCeEecCCCcccCCCCccccccccccccccccccccCCCCCC-CCCcccccccccCCccccCCC
Q 001988 576 PIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRG-GPFANFTAESFMGNELLCGLP 649 (985)
Q Consensus 576 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 649 (985)
.+|..+.++++|++|+|++|++++.+|..|..+++|+.|+|++|+++|.+|.. ..+..+....+.+|+..+..|
T Consensus 514 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 514 EIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred eCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999999999999999999999999999999999974 345566777778887665444
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=393.03 Aligned_cols=262 Identities=39% Similarity=0.604 Sum_probs=224.5
Q ss_pred cccccCHHHHHHHhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeee
Q 001988 712 TIRRFSYFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSC 791 (985)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~ 791 (985)
..+.|++.|+..||++|...+.||+|+||.||+|..++|+.||||++.........+|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46789999999999999999999999999999999999999999988766433146699999999999999999999999
Q ss_pred ecCC-ceEEEEeccCCCChHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 792 SNDD-FKALVLEYMSNGSLEDCLHSSNC-ALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 792 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
.+.+ +.++||||+++|+|.++++.... .++|..|++||.++|+||+|||+...+.||||||||+|||+|+++.+||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9998 59999999999999999998766 889999999999999999999876677899999999999999999999999
Q ss_pred ccCceeccCCCCcceeccc-ccccccccccccccCccchhhhcccccccchhhhcccccccCcch---------------
Q 001988 870 FGMAKLLSGEDESTMRTQT-LATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK--------------- 933 (985)
Q Consensus 870 fGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~--------------- 933 (985)
||+|+..... ....... .||.+|+|||++..+..+.++|| |+||++++|+++++.......
T Consensus 221 FGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDV-ySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 221 FGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDV-YSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCccccc-ccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 9999765321 1111112 79999999999999999999999 999999999999874332110
Q ss_pred -----------h---hhhH-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 934 -----------H---FAAK-EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 934 -----------~---~~~~-~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
. .... .++...+..++.+|++.+|.+||+|.||++.|+.+...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 0 0011 14567789999999999999999999999999666543
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.5e-47 Score=392.91 Aligned_cols=488 Identities=27% Similarity=0.401 Sum_probs=290.2
Q ss_pred EEEEEecCCcccccCchhcccccccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeecc
Q 001988 75 VTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSK 154 (985)
Q Consensus 75 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~ 154 (985)
...+++++|.++ .+.+.+.+|..|++|++++|+++ ..|++++.+..++.|+.|+|.++ .+|.....+.++..|+.|+
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 567889999988 67788999999999999999998 68999999999999999999887 2333444444455555555
Q ss_pred ccccCCCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCc
Q 001988 155 NKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEI 234 (985)
Q Consensus 155 n~l~g~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 234 (985)
|.+. .+|+++ +.+..|+.|+..+|+++ ..|+.++.+.+|..|++.+|++....|..+ +++.|++||+..|-+. .+
T Consensus 124 n~~~-el~~~i-~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 124 NELK-ELPDSI-GRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred ccee-ecCchH-HHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cC
Confidence 5554 444444 33444555555555554 444445555555555555555542222222 2555555555555444 44
Q ss_pred hhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCC
Q 001988 235 PQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNA 314 (985)
Q Consensus 235 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 314 (985)
|..++.+.+|+.|+|.+|+|. ..| .|.+++.|++|+++.|+|+ .+|...... +
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~------------------------L 251 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKH------------------------L 251 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcc------------------------c
Confidence 445555555555555555554 333 4445555555555555554 444444444 4
Q ss_pred CCccEEEccCcccccccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchh-h
Q 001988 315 SKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLS-L 393 (985)
Q Consensus 315 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~ 393 (985)
.++.+|||+.|+++ ..|..+.-+++|.+||+++|.|++.+.. ++++ +|+.|.+.+|++...-.+-+..-+ .
T Consensus 252 ~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~s------Lgnl-hL~~L~leGNPlrTiRr~ii~~gT~~ 323 (565)
T KOG0472|consen 252 NSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYS------LGNL-HLKFLALEGNPLRTIRREIISKGTQE 323 (565)
T ss_pred ccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcc------cccc-eeeehhhcCCchHHHHHHHHcccHHH
Confidence 55555555555554 4455555555555555555555555543 4455 566666666665422111111100 0
Q ss_pred cccceec--cccccccccCCcCCCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccC---CC
Q 001988 394 SLERLNI--AFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSR---LN 468 (985)
Q Consensus 394 ~L~~L~L--~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~ 468 (985)
-|++|.= ..-.++..-.. .-..-+ ...+..| ....+.+.+.|+++.-+++ .+|+....-.+ ..
T Consensus 324 vLKyLrs~~~~dglS~se~~------~e~~~t----~~~~~~~-~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt 391 (565)
T KOG0472|consen 324 VLKYLRSKIKDDGLSQSEGG------TETAMT----LPSESFP-DIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVT 391 (565)
T ss_pred HHHHHHHhhccCCCCCCccc------ccccCC----CCCCccc-chhhhhhhhhhcccccccc-cCCHHHHHHhhhcceE
Confidence 1222211 00011100000 000000 0011111 1233455666666666666 45544443333 56
Q ss_pred eEEccCCccccccCCCCcCcCcCce-EeeccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCC
Q 001988 469 ELDLNGNKISGSISSCLGNLTSLQY-LNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRN 547 (985)
Q Consensus 469 ~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 547 (985)
..+++.|++. .+|..+..+..+.. +.+++|.++ .+|..++.+++|..|++++|-+.. +|..++.+..|+.||+|.|
T Consensus 392 ~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln~-LP~e~~~lv~Lq~LnlS~N 468 (565)
T KOG0472|consen 392 SVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLND-LPEEMGSLVRLQTLNLSFN 468 (565)
T ss_pred EEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhhh-cchhhhhhhhhheeccccc
Confidence 6677777776 45665655555444 344444443 566666777777777777777664 4556777777888888888
Q ss_pred ccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEecCCCcccCCCCcccccccccccccccccccc
Q 001988 548 NLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLK 622 (985)
Q Consensus 548 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 622 (985)
.+. .+|..+..+..|+.+-.++|++....|+.+.+|.+|.+|||.+|.|. .+|..+++|++|++|+++||+++
T Consensus 469 rFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 469 RFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 887 78888888888888888889998777777999999999999999998 78889999999999999999998
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=358.73 Aligned_cols=235 Identities=25% Similarity=0.340 Sum_probs=205.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-ceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDD-FKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~-~~~lv~e~ 803 (985)
+.+..+.||+|..|+||+++++ +++.+|+|++...... ..+++.+|+++++.++||+||.+||+|..++ ...|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3445678999999999999976 7888999999655333 4678999999999999999999999999998 59999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
|++|+|++.+... +.+++...-+++.+|++||.||| ++++||||||||+|||++..|+|||||||.++.+.+.
T Consensus 160 MDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh--~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLH--EERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred cCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh--hccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 9999999999876 36899999999999999999996 4699999999999999999999999999999887533
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc-----------------hhhhhHHH-HHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE-----------------KHFAAKEQ-CLLSI 945 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~-----------------~~~~~~~~-~~~~l 945 (985)
...+.+||..|||||.+.++.|+.++|+ |++|..++|+..|+.+.... +.+..+++ +++++
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDI-WSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef 311 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDI-WSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEF 311 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccce-ecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHH
Confidence 4456789999999999999999999999 99999999999998766553 11122343 88999
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
..++..|+++||.+||++.|+++.
T Consensus 312 ~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 312 RSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999998864
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.2e-46 Score=383.85 Aligned_cols=480 Identities=27% Similarity=0.398 Sum_probs=372.4
Q ss_pred cccCCccceeeeccccccCCCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCcccccccccccc
Q 001988 141 TFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVL 220 (985)
Q Consensus 141 ~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 220 (985)
+|.-..++.|.+++|.+. .+-+.+ .++..|.+|++.+|+++ +.|++++.+..++.|+.++|+++ .+|+.++++.+|
T Consensus 41 wW~qv~l~~lils~N~l~-~l~~dl-~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l 116 (565)
T KOG0472|consen 41 WWEQVDLQKLILSHNDLE-VLREDL-KNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISL 116 (565)
T ss_pred hhhhcchhhhhhccCchh-hccHhh-hcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhh
Confidence 344455666666666666 444444 46778888888888887 77888888888888888888887 778888888888
Q ss_pred ceEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecC
Q 001988 221 QRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGI 300 (985)
Q Consensus 221 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~ 300 (985)
..|+++.|.+. ++|++++.+-.|+.|+..+|+++ ..|+.++++.+|..+++.+|++. .+|.... .++.|++||...
T Consensus 117 ~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i-~m~~L~~ld~~~ 192 (565)
T KOG0472|consen 117 VKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHI-AMKRLKHLDCNS 192 (565)
T ss_pred hhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHH-HHHHHHhcccch
Confidence 88888888887 67777888888888888888887 67777788888888888888887 5555443 377888888888
Q ss_pred ccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCC
Q 001988 301 NSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPL 380 (985)
Q Consensus 301 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 380 (985)
|.++ .+|..++.+.+|+.|+|..|++. ..| .|.++..|++|++..|+|.-++.+ .+.+++++..||+.+|++
T Consensus 193 N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae-----~~~~L~~l~vLDLRdNkl 264 (565)
T KOG0472|consen 193 NLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAE-----HLKHLNSLLVLDLRDNKL 264 (565)
T ss_pred hhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHH-----Hhcccccceeeecccccc
Confidence 8876 78888888888888888888887 556 788888888888888888877654 356788888899999988
Q ss_pred CccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEccCCCCCCCCCccccccc--cccceec-------ccc
Q 001988 381 DGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQ--KLQGLDL-------AFN 451 (985)
Q Consensus 381 ~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L-------s~N 451 (985)
. ..|+.+..+. +|++||+++|.|+ ..|..++++ .|+.|-+.+|.+..+-.+-+.+-+ -|++|.= |.-
T Consensus 265 k-e~Pde~clLr-sL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s 340 (565)
T KOG0472|consen 265 K-EVPDEICLLR-SLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS 340 (565)
T ss_pred c-cCchHHHHhh-hhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC
Confidence 7 6788888776 7999999999998 567789999 899999999988633222222111 1232211 111
Q ss_pred c---------ccCCchhhhhhccCCCeEEccCCccccccCCCCcCc--CcCceEeeccceeeeecCCCccCccceeEEee
Q 001988 452 K---------LAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNL--TSLQYLNLGSNRFTFVIPSTFWNLKDILSFDI 520 (985)
Q Consensus 452 ~---------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 520 (985)
+ ..+.. .....+.+.+.|++++-+++.++.+.|..- .-.+..+++.|++.. +|..+..+..+.+.-+
T Consensus 341 e~~~e~~~t~~~~~~-~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~e-lPk~L~~lkelvT~l~ 418 (565)
T KOG0472|consen 341 EGGTETAMTLPSESF-PDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCE-LPKRLVELKELVTDLV 418 (565)
T ss_pred cccccccCCCCCCcc-cchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhh-hhhhhHHHHHHHHHHH
Confidence 0 01111 223456779999999999995444444322 227889999999984 7777777777655444
Q ss_pred cCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEecCCCcccCC
Q 001988 521 SSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGS 600 (985)
Q Consensus 521 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 600 (985)
..|+..+-+|..++.+++|+.|+|++|-+. .+|.+++.+..|+.||+|.|+|. .+|..+..+..|+++-.++|++..+
T Consensus 419 lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~v 496 (565)
T KOG0472|consen 419 LSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSV 496 (565)
T ss_pred hhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccccc
Confidence 444444567788999999999999999998 78999999999999999999999 7999999999999999999999988
Q ss_pred CCccccccccccccccccccccCCCCCCCCCcccccccccCCcc
Q 001988 601 IPVSFEKLSYLKELNLSFNKLKGEIPRGGPFANFTAESFMGNEL 644 (985)
Q Consensus 601 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~ 644 (985)
.|..+.+|.+|++|||.+|.+...+|..+.++++......|||+
T Consensus 497 d~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 497 DPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred ChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 88889999999999999999999999999999999999999986
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=372.64 Aligned_cols=245 Identities=28% Similarity=0.436 Sum_probs=211.5
Q ss_pred cCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcch--HHHHHHHHHHHHhcCCCCeeeEEeeeecCC-ceEEEEeccC
Q 001988 729 AENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST--LKSFEAECEVIKNIRHRNLVKIISSCSNDD-FKALVLEYMS 805 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 805 (985)
...+.+|+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. ..++||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3445699999999999999744449999998664333 458999999999999999999999999887 7899999999
Q ss_pred CCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEeCCCCCCCEEEcCCC-cEEEecccCceeccCCCCc
Q 001988 806 NGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTP-IIHCDLKPSNVLLDEDM-VAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 806 ~gsL~~~l~~-~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~-ivHrDlk~~Nill~~~~-~~kl~DfGla~~~~~~~~~ 882 (985)
+|+|.++++. ....+++..++++|.|||+||.|| |+.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YL---H~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYL---HSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 9999999988 366899999999999999999999 7888 99999999999999998 99999999998864322
Q ss_pred ceecccccccccccccccc--cCccchhhhcccccccchhhhcccccccCcch-------------hhhhHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIF--VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-------------HFAAKEQCLLSIFS 947 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~l~~ 947 (985)
...+...||+.|||||++. ...++.++|| |+||+++||+++++.++.... ++..+..|+..+..
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dv-ySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~ 277 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDV-YSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSS 277 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchh-hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHH
Confidence 2233367999999999999 6699999999 999999999999987665432 22234458899999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHHhHhhhcc
Q 001988 948 LALECTMESPEKRIDAKDTITRLLKIRDTLSK 979 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~~ 979 (985)
+|.+||..||..||++.+++..++.+......
T Consensus 278 l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 278 LMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred HHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999876554
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-41 Score=352.66 Aligned_cols=238 Identities=26% Similarity=0.352 Sum_probs=204.5
Q ss_pred HhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcc-------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCAS-------TLKSFEAECEVIKNIRHRNLVKIISSCSNDD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~-------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~ 795 (985)
..+.|...+.+|+|+||.|-+|.. ++|+.||||+++++... ....+++|++||++++|||||+++++++.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 456788899999999999999984 58999999999876221 1234679999999999999999999999999
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC---CcEEEecccC
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED---MVAHLSDFGM 872 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~---~~~kl~DfGl 872 (985)
+.||||||++||+|.+.+-.++ .+.+....-++.|++.|+.|| |+.||+||||||+|||+..+ ..+||+|||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYL---H~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYL---HSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHH---HHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 9999999999999999998775 567778888999999999999 89999999999999999765 7899999999
Q ss_pred ceeccCCCCcceecccccccccccccccccCccch---hhhcccccccchhhhcccccccCcchhh--------------
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSL---KRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------- 935 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------- 935 (985)
|+... +.....+.||||.|.|||++..+.+.. +.|+ |++|++++-+++|.+++.+....
T Consensus 326 AK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDi-WSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f 401 (475)
T KOG0615|consen 326 AKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDI-WSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF 401 (475)
T ss_pred hhccc---cceehhhhcCCccccChhheecCCeecccchhee-eeccceEEEEeccCCCcccccCCccHHHHHhcCcccc
Confidence 99863 455667789999999999998766544 5599 99999999999998877654222
Q ss_pred --hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 936 --AAKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 936 --~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
....+..++..+++.+|+..||++||++.|+++.
T Consensus 402 ~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 402 GPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2345578899999999999999999999999864
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=366.17 Aligned_cols=245 Identities=29% Similarity=0.444 Sum_probs=213.2
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
+.+...+.||+|-||+||.|.++...+||+|.++.. ......|.+|+.+|++++|++||+++++|...+..+||||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 344556789999999999999987779999999876 3445788899999999999999999999999889999999999
Q ss_pred CCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 806 NGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 806 ~gsL~~~l~~-~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
.|+|.++++. .+..+...+.+.++.|||+|++|| +++++|||||.++|||++++..+||+|||+|+... ++.+..
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YL---es~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~-d~~Y~~ 360 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYL---ESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG-DDEYTA 360 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHH---HhCCccchhhhhhheeeccCceEEEcccccccccC-CCceee
Confidence 9999999997 566789999999999999999999 89999999999999999999999999999999553 344444
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhccccccc-Ccc------------hhhhhHHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLS-GEE------------KHFAAKEQCLLSIFSLALE 951 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~-~~~------------~~~~~~~~~~~~l~~l~~~ 951 (985)
.....-...|+|||.+..+.++.++|| |+||+.++|++++.-.. +.- .+.+.|+.|++++.++|..
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDV-WSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~ 439 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDV-WSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKS 439 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccce-eehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHH
Confidence 444456778999999999999999999 99999999999864322 221 2445677899999999999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 952 CTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
||+.+|++|||+..+...++++...
T Consensus 440 CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 440 CWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HhhCCcccCCCHHHHHHHHHHhhhc
Confidence 9999999999999999988887653
No 10
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=367.48 Aligned_cols=376 Identities=22% Similarity=0.243 Sum_probs=178.6
Q ss_pred eecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCc
Q 001988 174 HLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNN 253 (985)
Q Consensus 174 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 253 (985)
.||+++|.++..-+..|.++++|+++++.+|.++ .||...+...+|+.|+|.+|.|+..-.+++..++.|+.||||.|.
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~ 160 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNL 160 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhch
Confidence 3444444444444444445555555555555554 444433333344555555555444444444444445555555554
Q ss_pred CcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCC
Q 001988 254 LTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPS 333 (985)
Q Consensus 254 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (985)
|+...-.+|..-.++++|+|++|+|+ .+...-|..+.+|..|.|+.|+++-..+..|.++++|+.|+|..|++.-..--
T Consensus 161 is~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 161 ISEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhcccCCCCCCCCCceEEeecccccc-ccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 44322222322233333333333333 22222222233333333333333322222333333333333333333322222
Q ss_pred cccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcC
Q 001988 334 AIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAI 413 (985)
Q Consensus 334 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~ 413 (985)
.|.+|++|+.|.|..|++..+..+ .|..|.++++|+|+.|++. ..-..++
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG-----~Fy~l~kme~l~L~~N~l~-------------------------~vn~g~l 289 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDG-----AFYGLEKMEHLNLETNRLQ-------------------------AVNEGWL 289 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCc-----ceeeecccceeecccchhh-------------------------hhhcccc
Confidence 344444444444444444433332 1333444444444444443 3334444
Q ss_pred CCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCce
Q 001988 414 GNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQY 493 (985)
Q Consensus 414 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 493 (985)
.+++.|+.|+||+|.|..+.++.....++|++|+|++|+|+...+..|..+++|++|.|++|+|+..-...|..+++|++
T Consensus 290 fgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~ 369 (873)
T KOG4194|consen 290 FGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHK 369 (873)
T ss_pred cccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhh
Confidence 44555555555555555444554444555555555555555444455555555555555555555444445555555555
Q ss_pred EeeccceeeeecCC---CccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeee--
Q 001988 494 LNLGSNRFTFVIPS---TFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISL-- 568 (985)
Q Consensus 494 L~L~~N~l~~~~p~---~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-- 568 (985)
|||++|.++..+.+ .|.++++|+.|++.+|+|..+...+|..+++|+.|||.+|.|..+-|++|..+ .|++|.+
T Consensus 370 LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 370 LDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred hcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 55555555544332 45556666666666666666666666666677777777777766667777766 6666654
Q ss_pred ----ecceeccchhhhhhc
Q 001988 569 ----AYNRLEGPIPESFGN 583 (985)
Q Consensus 569 ----s~N~l~~~~p~~~~~ 583 (985)
.+|+|. -.++|+.+
T Consensus 449 ssflCDCql~-Wl~qWl~~ 466 (873)
T KOG4194|consen 449 SSFLCDCQLK-WLAQWLYR 466 (873)
T ss_pred cceEEeccHH-HHHHHHHh
Confidence 456665 45556543
No 11
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=368.11 Aligned_cols=369 Identities=25% Similarity=0.297 Sum_probs=296.8
Q ss_pred ceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccC
Q 001988 196 LQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYN 275 (985)
Q Consensus 196 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 275 (985)
-+.||+++|+++..-+..|.++++|+++++.+|.++ .||...+...+|+.|+|.+|.|+.+-.+.+.-++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 345777777777666677777777777777777777 6676555556677777777777766667777777777777777
Q ss_pred CcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcccCCC
Q 001988 276 NSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSST 355 (985)
Q Consensus 276 N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 355 (985)
|.|+ .+|..-|..-.++++|+|++|+|+..-...|.++.+|..|.|++|+++...+..|.+|++|+.|+|.+|+|...
T Consensus 159 N~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv- 236 (873)
T KOG4194|consen 159 NLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV- 236 (873)
T ss_pred chhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee-
Confidence 7776 56655555556677777777777766666666666666666666666655555566666666666555555432
Q ss_pred CcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEccCCCCCCCCCc
Q 001988 356 PELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPV 435 (985)
Q Consensus 356 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 435 (985)
--..|..++ +|+.|.|..|.|+..-..+|..+.++++|+|+.|+++..-.+
T Consensus 237 ----------------------------e~ltFqgL~-Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g 287 (873)
T KOG4194|consen 237 ----------------------------EGLTFQGLP-SLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEG 287 (873)
T ss_pred ----------------------------hhhhhcCch-hhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcc
Confidence 223344444 677777777777777778999999999999999999988899
Q ss_pred cccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCccce
Q 001988 436 TFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDI 515 (985)
Q Consensus 436 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 515 (985)
++.++++|+.|+||+|.|..+.++.+...++|++|+|+.|+|+...+..|..+..|++|+|++|+++.+...+|..+.+|
T Consensus 288 ~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL 367 (873)
T KOG4194|consen 288 WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSL 367 (873)
T ss_pred cccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCcccCCccc---cccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEec
Q 001988 516 LSFDISSNLLDGPISL---AIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDL 592 (985)
Q Consensus 516 ~~L~ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 592 (985)
+.|||++|.|...+.+ .|..+++|+.|+|.+|+|..+.-.+|.+++.|+.|||.+|.|..+-|++|..| .|++|.+
T Consensus 368 ~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 368 HKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred hhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 9999999999876554 58889999999999999997777899999999999999999999999999999 9999987
Q ss_pred CCCcc
Q 001988 593 SNNKI 597 (985)
Q Consensus 593 s~N~l 597 (985)
+.-.+
T Consensus 447 nSssf 451 (873)
T KOG4194|consen 447 NSSSF 451 (873)
T ss_pred cccce
Confidence 65433
No 12
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=346.85 Aligned_cols=199 Identities=30% Similarity=0.487 Sum_probs=179.9
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
..++|...+.||+|+||+||+|+++ ++..||||.+.+. .....+.+..|+++|+.++|||||++++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3467888888999999999999975 7899999999877 444566788999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC------CcEEEecccCce
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED------MVAHLSDFGMAK 874 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~------~~~kl~DfGla~ 874 (985)
||||.||||.++++..+ .+++.+.+.++.|+|.||++| |+++||||||||+|||++.. -.+||+|||+|+
T Consensus 88 MEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L---~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFL---HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999999999875 789999999999999999999 89999999999999999764 468999999999
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccC
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSG 930 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~ 930 (985)
.+. ........||+|.|||||+++.++|+.+.|+ |+.|+.++++++|+.++.
T Consensus 164 ~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADL-WSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 164 FLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADL-WSIGTILYQCLTGKPPFD 215 (429)
T ss_pred hCC---chhHHHHhhCCccccCHHHHHhccccchhhH-HHHHHHHHHHHhCCCCcc
Confidence 985 3334566899999999999999999999999 999999999999998766
No 13
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-40 Score=361.04 Aligned_cols=237 Identities=23% Similarity=0.322 Sum_probs=211.0
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
.+|..++.||+|||+.||.++. .+|..||+|++.+. .....+.+.+||+|.++++|||||+++++|++.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999997 79999999999874 2344577899999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|+|+.++|..+++ .++.+++.+++.++.||+.||.|| |+++|+|||||..|+|++++.++||+|||+|+.+..+++
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYL---H~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYL---HSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHH---HhcCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 9999999999988 456899999999999999999999 899999999999999999999999999999999864433
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh-----------hhhHHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-----------FAAKEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-----------~~~~~~~~~~l~~l~~ 950 (985)
...+.||||.|+|||++.....++..|+ |++||+++-++.|+.++..... +..|.....+..++|.
T Consensus 174 --rk~TlCGTPNYIAPEVl~k~gHsfEvDi-WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~ 250 (592)
T KOG0575|consen 174 --RKKTLCGTPNYIAPEVLNKSGHSFEVDI-WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIR 250 (592)
T ss_pred --ccceecCCCcccChhHhccCCCCCchhh-hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHH
Confidence 3456899999999999999999999999 9999999999999887765421 2223345677889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
++++++|.+||++++|+..
T Consensus 251 ~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHhcCCcccCCCHHHHhcC
Confidence 9999999999999999863
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-41 Score=333.57 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=201.7
Q ss_pred cCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEe-eeecCCc-eEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIIS-SCSNDDF-KALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~-~~~~~~~-~~lv 800 (985)
.+|++.++||+|.||+||++. ..+|..||.|.++... ....+....|+.+|++++|||||++++ .+.++.. .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457778899999999999997 5689999999998553 334567889999999999999999999 4555444 8999
Q ss_pred EeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 801 LEYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTP--IIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
||||.+|+|...++. .++.+++.++++++.|++.||..+|+.- ++ |+||||||.||+++.+|.|||+|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999998863 4667999999999999999999995311 44 88999999999999999999999999999
Q ss_pred ccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhH-HHHH
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAK-EQCL 942 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~-~~~~ 942 (985)
+. ...+...+.+|||.||+||.+.+.+|++++|+ |++|++++||..-..++...... +.+ +-.+
T Consensus 178 l~--s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDi-WslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS 254 (375)
T KOG0591|consen 178 LS--SKTTFAHSLVGTPYYMSPERIHESGYNFKSDI-WSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYS 254 (375)
T ss_pred hc--chhHHHHhhcCCCcccCHHHHhcCCCCcchhH-HHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhh
Confidence 85 34455677889999999999999999999999 99999999998765544332211 122 4577
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 943 LSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 943 ~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
..+.+++..|+.+||+.||+...++..+..
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 889999999999999999986555555443
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.9e-39 Score=365.05 Aligned_cols=252 Identities=28% Similarity=0.469 Sum_probs=219.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~ 797 (985)
..+....+.||+|+||+||+|+.. +...||||.++..... ...+|++|++++..++|||||+++|+|.+++.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 344556688999999999999753 4566999999877655 678999999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHhhcC---------CCC----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc
Q 001988 798 ALVLEYMSNGSLEDCLHSS---------NCA----LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 864 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~---------~~~----~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~ 864 (985)
+||+|||..|||.++|... +.. ++..+.+.||.|||.|++|| .++.+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YL---s~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYL---SSHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCcccccchhhhhceeccceE
Confidence 9999999999999999753 122 78899999999999999999 8899999999999999999999
Q ss_pred EEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc------------
Q 001988 865 AHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE------------ 932 (985)
Q Consensus 865 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~------------ 932 (985)
|||+|||+++.+...+.+.......-..+||+||.++.++++.++|| |++|+++||++++.......
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDV-Ws~GVvLWEIFsyG~QPy~glSn~EVIe~i~~ 720 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDV-WSFGVVLWEIFSYGKQPYYGLSNQEVIECIRA 720 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhh-hhhhhhhhhhhccccCcccccchHHHHHHHHc
Confidence 99999999998876666665545566889999999999999999999 99999999999977543322
Q ss_pred -hhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhccc
Q 001988 933 -KHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLSKR 980 (985)
Q Consensus 933 -~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~~~ 980 (985)
...+.++.|+.++++||..||+..|.+||+++||-.+|+...++....
T Consensus 721 g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 721 GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 123467789999999999999999999999999999999988765543
No 16
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=330.59 Aligned_cols=232 Identities=27% Similarity=0.322 Sum_probs=198.3
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
..++|+..+.||+|+||+||.++.+ +++.||+|+++++. ..+.+..++|..|+.+++||+||+++..|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3578899999999999999999855 78889999998762 2346778999999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
|+||+.||+|+.++.+.+ .+++....-++.+|+.||.|| |++||||||+||+|||+|.+|+++|+|||+++..-.
T Consensus 103 Vld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~L---H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~- 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYL---HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK- 177 (357)
T ss_pred EEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence 999999999999999775 688888889999999999999 899999999999999999999999999999986432
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFS 947 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~ 947 (985)
....+..+|||+.|||||++.+.+++..+|. |++|+.++||++|..++....... .+.-...+.++
T Consensus 178 -~~~~t~tfcGT~eYmAPEil~~~gy~~~vDW-WsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ard 255 (357)
T KOG0598|consen 178 -DGDATRTFCGTPEYMAPEILLGKGYDKAVDW-WSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARD 255 (357)
T ss_pred -CCCccccccCCccccChHHHhcCCCCcccch-HhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHH
Confidence 2233455899999999999999999988887 999999999999987665432111 11114567888
Q ss_pred HHHHccCCCCCCCCC
Q 001988 948 LALECTMESPEKRID 962 (985)
Q Consensus 948 l~~~cl~~~P~~RPt 962 (985)
++++.+..+|++|-.
T Consensus 256 ll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 256 LLKKLLKRDPRQRLG 270 (357)
T ss_pred HHHHHhccCHHHhcC
Confidence 889999999998853
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.9e-38 Score=316.68 Aligned_cols=236 Identities=22% Similarity=0.321 Sum_probs=199.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
+.|+...++|+|+||.||+++.+ +|+.||||++..... .-.+-..+|+++|++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45777889999999999999976 799999999975422 224557899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
||+. ++.+-++......+...+.++++|++.|+.|+ |++++|||||||+|||++.+|.+||||||+|+.+..++
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~c---Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg-- 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFC---HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG-- 155 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhh---hhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc--
Confidence 9966 77777777766788999999999999999999 89999999999999999999999999999999986433
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------ 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------ 937 (985)
...+..+.|.+|+|||.+.+ .+|....|+ |+.|+++.|+++|+.++....+.++
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDi-WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDI-WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccc-hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 33456789999999998887 788999999 9999999999999876654432211
Q ss_pred ---------------H---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ---------------K---EQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ---------------~---~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+ .....-++++++.|+..||++|++-+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 0 113356788999999999999999988764
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=344.19 Aligned_cols=236 Identities=27% Similarity=0.359 Sum_probs=211.5
Q ss_pred cCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
..|..-.+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.|+||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 346666789999999999997 4588999999999887777788899999999999999999999998889999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
+||+|.|.+... .+++.++..|++++++||+|| |.+||+|||||.+|||++.+|.+||+|||+|..+... ...
T Consensus 353 ~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fL---H~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~--~~K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKT--RMTEGQIAAICREILQGLKFL---HARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE--QSK 425 (550)
T ss_pred CCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHH---HhcceeeeccccceeEeccCCcEEEeeeeeeeccccc--cCc
Confidence 999999999876 489999999999999999999 8999999999999999999999999999999987533 335
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc--------------hhhhhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE--------------KHFAAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~l~~l~~ 950 (985)
....+|||+|||||++....|.++.|+ |++|++++||+.|+.++-.. +....++..+.++.+++.
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDI-WSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~ 504 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDI-WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLD 504 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccc-hhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHH
Confidence 567789999999999999999999999 99999999999999866532 233456678889999999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
+|+..||.+||+|.|+++.
T Consensus 505 ~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 505 RCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHhhcchhcCCCHHHHhcC
Confidence 9999999999999999863
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-39 Score=338.51 Aligned_cols=238 Identities=24% Similarity=0.296 Sum_probs=202.0
Q ss_pred HhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchH-HHHHHHHHHHHhcC-CCCeeeEEeeeecCC-ceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTL-KSFEAECEVIKNIR-HRNLVKIISSCSNDD-FKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~-~~~~~E~~il~~l~-h~niv~l~~~~~~~~-~~~l 799 (985)
.-++|...++||.|.||.||+|+ .+++..||||+++++...-. ..=.+|+..|++++ |||||++.+++.+.+ ..++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 34678889999999999999998 45889999999987754432 23368999999998 999999999999888 9999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
|||||+. +|.+.++..++.+++.+++.|+.||++||+|+ |.+|+.|||+||+|||+.....+||+|||+|+.+...
T Consensus 88 VfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hi---Hk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHI---HKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHH---HhcCcccccCChhheEecccceeEecccccccccccC
Confidence 9999954 99999999988999999999999999999999 8999999999999999999999999999999987644
Q ss_pred CCcceecccccccccccccccc-cCccchhhhcccccccchhhhcccccccCcchhhhh---------------------
Q 001988 880 DESTMRTQTLATIGYMAPDEIF-VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA--------------------- 937 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~--------------------- 937 (985)
.. .+..+.|.+|+|||++. .+.|+.+.|+ |++|++++|+..-+.++....+.++
T Consensus 164 pP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~-wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 164 PP---YTEYVSTRWYRAPEVLLRSGYYSSPVDM-WAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred CC---cchhhhcccccchHHhhhccccCCchHH-HHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 43 34567999999999876 4678999999 9999999999876554433221111
Q ss_pred --------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 --------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 --------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
...+..+..+++.+|+.+||++||||.+.++.
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 01156788999999999999999999998864
No 20
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=342.22 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=216.1
Q ss_pred HHHHHHHhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCC
Q 001988 718 YFELLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDD 795 (985)
Q Consensus 718 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~ 795 (985)
..++....+.+..++.||+|+||+||+|+|. -.||||++..... ...+.|++|+.++++-+|.||+-|.|||..+.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 3566666777888999999999999999986 2599999986643 34678999999999999999999999999988
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
. .||+.+|+|.+|..+++..+..++..+.+.||+|||+|+.|| |+++|||||+|..||++.++++|||+|||++..
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YL---HAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYL---HAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred e-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhh---hhhhhhhhhccccceEEccCCcEEEecccceee
Confidence 7 899999999999999998877899999999999999999999 899999999999999999999999999999976
Q ss_pred ccCCCCcceeccccccccccccccccc---CccchhhhcccccccchhhhcccccccCcchhh----------------h
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFV---GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----------------A 936 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----------------~ 936 (985)
-..-..........|..-|||||++.. -+|++.+|| |+||+++||++++.+++...... .
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDV-YaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~ 616 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDV-YAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSK 616 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccch-hhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchh
Confidence 432222222333458888999998874 468999999 99999999999999987743221 1
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
....|+.++.+|+..||..++++||.+.+++.+|+++....
T Consensus 617 ~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 617 IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 23458889999999999999999999999999998887743
No 21
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=376.03 Aligned_cols=482 Identities=30% Similarity=0.391 Sum_probs=245.2
Q ss_pred EEecCCcccccCchhcccccccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeeccccc
Q 001988 78 LNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKL 157 (985)
Q Consensus 78 l~L~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l 157 (985)
+|++...+. .||..+..-..++.|+++.|.+-...-+++.+..+|+.|||++|++. ..|..+-.++.|..|++|.|.+
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 455555555 56766666666778888877665322233444445777777777765 2223333344444444444444
Q ss_pred cCCCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhh
Q 001988 158 SGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQE 237 (985)
Q Consensus 158 ~g~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 237 (985)
. .+|.++ +++++|++|.|.+|.+. ..|.++..+++|++|++|+|++. .+|..+..++.+..+..++|... ..
T Consensus 81 ~-~vp~s~-~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~----~~ 152 (1081)
T KOG0618|consen 81 R-SVPSSC-SNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKI----QR 152 (1081)
T ss_pred h-hCchhh-hhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhh----hh
Confidence 4 444333 44555555555555544 45555555555555555555554 45555555555555555555111 11
Q ss_pred hcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCc
Q 001988 238 IGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKL 317 (985)
Q Consensus 238 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 317 (985)
++... .+.+++..|.+.+.++..+.+++. .|+|+.|.+. -..+.++.+|
T Consensus 153 lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~----------------------------~~dls~~~~l 201 (1081)
T KOG0618|consen 153 LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME----------------------------VLDLSNLANL 201 (1081)
T ss_pred hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh----------------------------hhhhhhccch
Confidence 11111 444444455544444444444443 4444444443 1223344444
Q ss_pred cEEEccCcccccccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccc
Q 001988 318 ILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLER 397 (985)
Q Consensus 318 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~ 397 (985)
+.|....|+++... -..++|+.|+.++|.++..... .--.+|++++++.|++++ +|+|+..+. +|+.
T Consensus 202 ~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~-------p~p~nl~~~dis~n~l~~-lp~wi~~~~-nle~ 268 (1081)
T KOG0618|consen 202 EVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH-------PVPLNLQYLDISHNNLSN-LPEWIGACA-NLEA 268 (1081)
T ss_pred hhhhhhhcccceEE----ecCcchheeeeccCcceeeccc-------cccccceeeecchhhhhc-chHHHHhcc-cceE
Confidence 44444444444221 1224455555555555432211 112345555555555552 345555554 5555
Q ss_pred eeccccccccccCCcCCCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhh-hhcc-CCCeEEccCC
Q 001988 398 LNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEI-CLLS-RLNELDLNGN 475 (985)
Q Consensus 398 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~-~L~~L~L~~N 475 (985)
++..+|+++ .+|..+...++|+.|....|.+. -+|....+++.|++|||..|+|. ..|+.+ .-+. +|+.|..+.|
T Consensus 269 l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n 345 (1081)
T KOG0618|consen 269 LNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSN 345 (1081)
T ss_pred ecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhc
Confidence 555555553 44555555555555555555555 23334445555555555555555 233322 2222 2455555555
Q ss_pred ccccccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCch
Q 001988 476 KISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPT 555 (985)
Q Consensus 476 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 555 (985)
++.......=..++.|+.|++.+|+++...-..+.+..+|+.|+|++|++...+...+.++..|++|+||+|+++ .+|.
T Consensus 346 ~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~ 424 (1081)
T KOG0618|consen 346 KLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPD 424 (1081)
T ss_pred cccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhH
Confidence 554322222233455666666666665544444555566666666666666555555666666666666666666 4556
Q ss_pred hhcccccceeeeeecceeccchhhhhhcccccCeEecCCCcccCC-CCcccccccccccccccccc
Q 001988 556 TLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGS-IPVSFEKLSYLKELNLSFNK 620 (985)
Q Consensus 556 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~ 620 (985)
++..++.|++|...+|+|. ..| .+.+++.|+.+|+|.|+|+.. +|.... -++|++|||+||.
T Consensus 425 tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 425 TVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNT 487 (1081)
T ss_pred HHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCc
Confidence 6666666666666666665 344 566666666666666666543 222222 2566666666665
No 22
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=328.87 Aligned_cols=245 Identities=29% Similarity=0.393 Sum_probs=204.2
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC--ceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD--FKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~--~~~lv~e 802 (985)
.++..++.||+|+||.||++... +|...|||.+........+.+.+|+.+|++++|||||+++|...... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45677899999999999999865 58999999987664444677899999999999999999999855544 5889999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-CCcEEEecccCceeccCCC-
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLSGED- 880 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-~~~~kl~DfGla~~~~~~~- 880 (985)
|+++|+|.+++...+..+++..+.+++.||++||+|| |++|||||||||+|||++. ++.+||+|||+++......
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~yl---Hs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYL---HSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 9999999999998765789999999999999999999 8999999999999999999 7999999999998875311
Q ss_pred CcceecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcc-h-------------hhhhHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEE-K-------------HFAAKEQCLLSI 945 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~-~-------------~~~~~~~~~~~l 945 (985)
.........||+.|||||++..+. ...++|+ |++|+.+.||+++..++... . .+..++..+++.
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDi-WSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDI-WSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchh-hhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHH
Confidence 122234567999999999998643 3358999 99999999999987655441 0 112234466789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 946 FSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
.+++.+|+..+|++||||.+++...-...
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 99999999999999999999998765433
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-37 Score=305.51 Aligned_cols=237 Identities=24% Similarity=0.358 Sum_probs=202.3
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcch--HHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCAST--LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|...+.+|+|.||.||+|++ ++|+.||||+++.....+ .....+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4678889999999999999984 589999999998664332 3467899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++. +|+..++.....++..++..++.++.+|++|+ |++.|+|||+||.|+|++.+|.+||+|||+|+.+......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~---H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYC---HSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHH---HhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9965 99999999988999999999999999999999 8999999999999999999999999999999998755443
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------ 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------ 937 (985)
. +..+-|.+|+|||.+++ ..|+...|+ |+.||.+.|++-+..+.....+.++
T Consensus 158 ~--~~~V~TRWYRAPELLfGsr~Yg~~VDm-WavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 158 Q--THQVVTRWYRAPELLFGSRQYGTGVDM-WAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred c--ccceeeeeccChHHhccchhcCCcchh-hhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 3 23378999999999886 568889999 9999999999877655443321111
Q ss_pred ---------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 ---------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 ---------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
...+.....+++..++.++|.+|++++|+++.
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 01145667999999999999999999999864
No 24
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=374.04 Aligned_cols=485 Identities=28% Similarity=0.392 Sum_probs=398.6
Q ss_pred ecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhccccceecccCcc
Q 001988 102 LDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENM 181 (985)
Q Consensus 102 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L~L~~n~ 181 (985)
+|.+..+++ .||..+..-..|+.|++++|-+ - ..|-......-+|+.||+++|+
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~------------------------l-~~pl~~~~~~v~L~~l~lsnn~ 56 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSL------------------------L-SRPLEFVEKRVKLKSLDLSNNQ 56 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhcccccc------------------------c-cCchHHhhheeeeEEeeccccc
Confidence 455555555 4666554443455555555544 3 4444444444458889999888
Q ss_pred ccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCccc
Q 001988 182 FYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPAT 261 (985)
Q Consensus 182 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 261 (985)
+. ..|..+..+.+|+.|.++.|.|. ..|.+.+++.+|++|.|.+|++. ..|..+..+++|++||+++|++. .+|..
T Consensus 57 ~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~ 132 (1081)
T KOG0618|consen 57 IS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLV 132 (1081)
T ss_pred cc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchh
Confidence 87 88888999999999999999998 78888889999999999999988 78999999999999999999997 78888
Q ss_pred ccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCC
Q 001988 262 IFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNL 341 (985)
Q Consensus 262 l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 341 (985)
+..++.++++..++|.....++. ..++.++|..|.+.+.++..+.++.. .|+|++|.+. -..+.++.+|
T Consensus 133 i~~lt~~~~~~~s~N~~~~~lg~------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l 201 (1081)
T KOG0618|consen 133 IEVLTAEEELAASNNEKIQRLGQ------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANL 201 (1081)
T ss_pred HHhhhHHHHHhhhcchhhhhhcc------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccch
Confidence 99999999999999933323332 23888999999999999988888777 8999999997 3357788999
Q ss_pred ceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccE
Q 001988 342 KLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIV 421 (985)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 421 (985)
+.+....|++..... .-++|+.|+.++|.++...+.. .+.+|+++++++|++++ +|++++.+.+|+.
T Consensus 202 ~~l~c~rn~ls~l~~---------~g~~l~~L~a~~n~l~~~~~~p---~p~nl~~~dis~n~l~~-lp~wi~~~~nle~ 268 (1081)
T KOG0618|consen 202 EVLHCERNQLSELEI---------SGPSLTALYADHNPLTTLDVHP---VPLNLQYLDISHNNLSN-LPEWIGACANLEA 268 (1081)
T ss_pred hhhhhhhcccceEEe---------cCcchheeeeccCcceeecccc---ccccceeeecchhhhhc-chHHHHhcccceE
Confidence 999999999986543 3478999999999998544332 23479999999999994 5699999999999
Q ss_pred EEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCc-CceEeeccce
Q 001988 422 LSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTS-LQYLNLGSNR 500 (985)
Q Consensus 422 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~ 500 (985)
++..+|++. .+|..+...++|+.|++..|.++ .+|+....++.|+.|+|..|+|...++..|.-+.. |..|+.+.|+
T Consensus 269 l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~ 346 (1081)
T KOG0618|consen 269 LNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNK 346 (1081)
T ss_pred ecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcc
Confidence 999999996 78888899999999999999999 67888888999999999999998655545555444 8889999999
Q ss_pred eeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhh
Q 001988 501 FTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPES 580 (985)
Q Consensus 501 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 580 (985)
+.....-.=..+..|+.|++.+|.++...-..+.+...|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|+.
T Consensus 347 l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~t 425 (1081)
T KOG0618|consen 347 LSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDT 425 (1081)
T ss_pred ccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHH
Confidence 88654222235678999999999999877678899999999999999999776678899999999999999999 68999
Q ss_pred hhcccccCeEecCCCcccCCCCccccccccccccccccccccC-CCCCCCCCcccccccccCCccc
Q 001988 581 FGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKG-EIPRGGPFANFTAESFMGNELL 645 (985)
Q Consensus 581 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~~~~~~~~~~~n~~l 645 (985)
+.++..|++|...+|+|. ..| .+..++.|+.+|+|.|+|+- .+|..-+..++..+.+.||.++
T Consensus 426 va~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 426 VANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred HHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 999999999999999998 778 89999999999999999984 4555556678888889999863
No 25
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=334.56 Aligned_cols=242 Identities=27% Similarity=0.383 Sum_probs=210.4
Q ss_pred HHHhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccC---CcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCc
Q 001988 722 LRATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQ---CASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDF 796 (985)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~ 796 (985)
.+...+|..++.||.|+|++||+|+. +++++||||++.++ .....+-+.+|-++|.++ .||.|++++..|++...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34457888999999999999999985 47899999999765 223345678899999999 89999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
.|+|+||+++|+|.+++++.+ .+++.+.+-+|.+|+.|++|| |++|||||||||+|||+|++|++||+|||.|+.+
T Consensus 149 LYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleyl---H~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYL---HSNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 999999999999999999875 789999999999999999999 8999999999999999999999999999999987
Q ss_pred cCCCCc---------c--eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh---------
Q 001988 877 SGEDES---------T--MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------- 936 (985)
Q Consensus 877 ~~~~~~---------~--~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------- 936 (985)
.+.... . ....++||..|++||.+.++..+..+|+ |++||++++|+.|..++....++.
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDi-WAlGCilyQmlaG~PPFra~NeyliFqkI~~l~ 303 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDL-WALGCILYQMLAGQPPFRAANEYLIFQKIQALD 303 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccch-HHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc
Confidence 643211 1 1255889999999999999999999999 999999999999998776654333
Q ss_pred --hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 --AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 --~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.++..++.+.+|+++.+..||.+|++..+|.+
T Consensus 304 y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 304 YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred ccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 23445678999999999999999999987765
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-37 Score=321.06 Aligned_cols=241 Identities=24% Similarity=0.348 Sum_probs=207.6
Q ss_pred HhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
..+.|+..+.||.|..++||+|+. ..+..||||++..+.. .+.+.+++|+..|+.++||||++++..|..+...|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 346788899999999999999984 5789999999986643 34688999999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 802 EYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
.||.+|++.+.++.. ...+++..+..|.++++.||.|| |.+|.||||||+.|||++.+|.|||+|||....+-+.+
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL---H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL---HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH---HhcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999999999875 44589999999999999999999 89999999999999999999999999999765554333
Q ss_pred C-ccee-cccccccccccccccc--cCccchhhhcccccccchhhhcccccccCcch---------------------hh
Q 001988 881 E-STMR-TQTLATIGYMAPDEIF--VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---------------------HF 935 (985)
Q Consensus 881 ~-~~~~-~~~~gt~~y~aPE~~~--~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~---------------------~~ 935 (985)
. .... ...+||+.|||||+++ ...|++++|+ |+||+.+.|+.+|..++...+ ..
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDI-wSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADI-WSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhh-hhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 2 2222 5568999999999965 3679999999 999999999999998876654 22
Q ss_pred hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+........+.+++..|+..||.+||||+++++
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 233445678999999999999999999999985
No 27
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-37 Score=328.15 Aligned_cols=238 Identities=24% Similarity=0.326 Sum_probs=201.5
Q ss_pred hcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~l 799 (985)
.+.|...++||+|+||.||+|+ ..+|+.||+|+++.+.. ....-..+||.||++++||||+++.+...+. +..||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3557777899999999999998 56899999999987753 3345567999999999999999999998776 68999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
|+|||+. ||.-++...+-.+++.++..++.|+++||+|+ |.+||+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~c---H~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYC---HSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHH---hhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999976 99999988777899999999999999999999 8999999999999999999999999999999998755
Q ss_pred CCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh---------------------
Q 001988 880 DESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA--------------------- 937 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~--------------------- 937 (985)
.... .+..+-|.+|.|||.+.+ ..|+.+.|+ |+.||++.|++.|+.......+..+
T Consensus 272 ~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDl-WS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 272 GSAP-YTSRVVTLWYRPPELLLGATSYGTAVDL-WSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCcc-cccceEEeeccChHHhcCCcccccceee-hhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 4433 556679999999998876 568999999 9999999999988754332211110
Q ss_pred -------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+...++++..++..||.+|.||.++++
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1123466788999999999999999999875
No 28
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-37 Score=340.39 Aligned_cols=243 Identities=22% Similarity=0.406 Sum_probs=209.8
Q ss_pred cCCceeeccCceeEEEEEEc----CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 729 AENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
.+.++||.|-||+||+|+++ ....||||.++.... ....+|..|+.||.++.||||+++.|+.......+||+||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 55789999999999999976 345699999986643 3456899999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc-
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES- 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~- 882 (985)
|++|+|..+|+.+.+.+++.+...+.++||.|++|| .+.++|||||.++|||++.+-.+|++|||+++.+.++.+.
T Consensus 712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYL---sdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYL---SDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHH---hhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 999999999999988899999999999999999999 8999999999999999999999999999999988654422
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhccccc-ccC------------cchhhhhHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL-LSG------------EEKHFAAKEQCLLSIFSLA 949 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~-~~~------------~~~~~~~~~~~~~~l~~l~ 949 (985)
..+..-.-..+|.|||.+...+++.++|| |++|+++||++.+.- ++. ...+.+.+.+|+..+.++|
T Consensus 789 ytt~GGKIPiRWTAPEAIa~RKFTsASDV-WSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLM 867 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAYRKFTSASDV-WSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLM 867 (996)
T ss_pred ccccCCccceeecChhHhhhcccCchhhc-cccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence 22222223578999999999999999999 999999999987532 211 1124456778999999999
Q ss_pred HHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 950 LECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
..||++|-.+||.+.+++..|.++-.
T Consensus 868 ldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 868 LDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 99999999999999999999998653
No 29
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-36 Score=298.40 Aligned_cols=231 Identities=28% Similarity=0.315 Sum_probs=189.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcch---HHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAST---LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.+|.|+||+|.+++.+ +|..+|+|++.++.--. .+...+|..+|+.+.||+++++++.|.+.+..||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56777889999999999999965 78899999998763333 345678999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||++||.|+.+++..+ ++++...+-+|.||+.|++|| |+.+|++||+||+|||+|.+|.+||+|||+|+...+
T Consensus 124 eyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleyl---H~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~--- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYL---HSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG--- 196 (355)
T ss_pred eccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHH---HhcCeeeccCChHHeeeccCCcEEEEeccceEEecC---
Confidence 9999999999999875 788999999999999999999 899999999999999999999999999999998742
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhhHHHHHHHHHHHHHHccCCCCCCCC
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRI 961 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 961 (985)
.+...||||.|+|||.+....+..+.|. |++|+.++||+.|..++...... .-..+|+..=+..-+---|
T Consensus 197 --rT~TlCGTPeYLAPEii~sk~ynkavDW-WalGVLIYEMlaG~pPF~~~~~~-------~iY~KI~~~~v~fP~~fs~ 266 (355)
T KOG0616|consen 197 --RTWTLCGTPEYLAPEIIQSKGYNKAVDW-WALGVLIYEMLAGYPPFYDDNPI-------QIYEKILEGKVKFPSYFSS 266 (355)
T ss_pred --cEEEecCCccccChHHhhcCCCCcchhH-HHHHHHHHHHHcCCCCCcCCChH-------HHHHHHHhCcccCCcccCH
Confidence 2456899999999999999999877776 99999999999998876654321 1122222222333333355
Q ss_pred CHHHHHHHHHHh
Q 001988 962 DAKDTITRLLKI 973 (985)
Q Consensus 962 t~~ev~~~L~~i 973 (985)
.+.++++.|.++
T Consensus 267 ~~kdLl~~LL~v 278 (355)
T KOG0616|consen 267 DAKDLLKKLLQV 278 (355)
T ss_pred HHHHHHHHHHhh
Confidence 566666555443
No 30
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.5e-36 Score=336.30 Aligned_cols=249 Identities=22% Similarity=0.356 Sum_probs=202.4
Q ss_pred HhcCccCCceeeccCceeEEEEEE------cCCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecC-
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARL------EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSND- 794 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~- 794 (985)
..++|...+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+++++++ +||||++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 456889999999999999999974 2456799999875432 3346789999999999 899999999998764
Q ss_pred CceEEEEeccCCCChHHHhhcCC---------------------------------------------------------
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSN--------------------------------------------------------- 817 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 817 (985)
+..++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 45789999999999999987531
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccccccc
Q 001988 818 ----CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIG 893 (985)
Q Consensus 818 ----~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~ 893 (985)
..+++.+..+++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.+.............+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 2367888899999999999999 789999999999999999999999999999987643322222233346788
Q ss_pred cccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-------------hhHHHHHHHHHHHHHHccCCCCCC
Q 001988 894 YMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------------AAKEQCLLSIFSLALECTMESPEK 959 (985)
Q Consensus 894 y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------------~~~~~~~~~l~~l~~~cl~~~P~~ 959 (985)
|+|||.+.+..++.++|+ |++|++++++++ +..+....... ..+..+++++.+++.+||+.||++
T Consensus 242 y~aPE~~~~~~~~~~sDi-wslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 320 (338)
T cd05102 242 WMAPESIFDKVYTTQSDV-WSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKE 320 (338)
T ss_pred ccCcHHhhcCCCCcccCH-HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence 999999999999999999 999999999986 65544321110 112235678999999999999999
Q ss_pred CCCHHHHHHHHHHhHhh
Q 001988 960 RIDAKDTITRLLKIRDT 976 (985)
Q Consensus 960 RPt~~ev~~~L~~i~~~ 976 (985)
||++.|+++.|+++.++
T Consensus 321 RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 321 RPTFSALVEILGDLLQE 337 (338)
T ss_pred CcCHHHHHHHHHHHHhc
Confidence 99999999999988753
No 31
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=321.80 Aligned_cols=244 Identities=25% Similarity=0.408 Sum_probs=209.6
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcch-HHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST-LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
+.....++||+|-||+|.+++...+..||||.++...... ..+|.+|+++|.+++|||||+++|+|..++..++|+||+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 3445678899999999999999888999999999875554 488999999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSNCA-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~-~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++|+|.+++.++..+ .+.....+|+.|||.|++|| .+.++||||+.++|+|+|.++++||+|||+++-+...+.+.
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYL---es~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYL---ESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHH---HhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999887433 35556678999999999999 89999999999999999999999999999999776666666
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhccccc--ccC-----------------cc--hhhhhHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL--LSG-----------------EE--KHFAAKEQCL 942 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~--~~~-----------------~~--~~~~~~~~~~ 942 (985)
.....+-..+|||||.+..++++.++|+ |.||+.+||++...- ++. .. -....+..|+
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDv-WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp 773 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDV-WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACP 773 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhh-hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCc
Confidence 6666677899999999999999999999 999999999876321 111 10 0122345589
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 943 LSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 943 ~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
.+++++|.+||+.+..+||+++++...|.+.
T Consensus 774 ~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 774 QGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 9999999999999999999999999988764
No 32
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=355.86 Aligned_cols=249 Identities=25% Similarity=0.414 Sum_probs=214.1
Q ss_pred cCccCCceeeccCceeEEEEEEc--CCc----EEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE--DGV----EIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~--~~~----~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
++....+.||+|+||.||.|... ++. .||||.+++.. .++..+|.+|..+|++++|||||+++|+|.+.+..+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 34556678999999999999865 343 49999998763 456778999999999999999999999999999999
Q ss_pred EEEeccCCCChHHHhhcC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 799 LVLEYMSNGSLEDCLHSS------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
|++|||+||+|..++++. ...++..+.+.++.|||+|+.|| +++++|||||.++|+|++....|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL---e~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL---ESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH---HhCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999987 56789999999999999999999 899999999999999999999999999999
Q ss_pred ceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhccc-ccccCcc------------hhhhhHH
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK-SLLSGEE------------KHFAAKE 939 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~------------~~~~~~~ 939 (985)
|+.+.+.+.+.......-...|||||.+.++.++.++|| |+||+.+||+++. ..+++.. .+.+.+.
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDv-WsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~ 927 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDV-WSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPS 927 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccch-hhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCC
Confidence 997655554443333345678999999999999999999 9999999999973 3333322 1445677
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
.|++.++++|..||+.+|++||++..+++++..+.++..
T Consensus 928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 799999999999999999999999999999998887643
No 33
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=329.45 Aligned_cols=244 Identities=24% Similarity=0.310 Sum_probs=208.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC----Cc-chHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCc
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ----CA-STLKSFEAECEVIKNIR-HRNLVKIISSCSNDDF 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~----~~-~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~ 796 (985)
..++|..++.||+|+||.|+.|... +++.||+|++.++ .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4578999999999999999999754 7899999987664 11 23456778999999999 9999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCcee
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAKL 875 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla~~ 875 (985)
.++||||+.||+|.+++.. ..++.+....++++|++.|++|+ |++||+||||||+||++|.+ +++||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~---H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYC---HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999998 55788899999999999999999 89999999999999999999 9999999999998
Q ss_pred ccCCCCcceecccccccccccccccccCc-cc-hhhhcccccccchhhhcccccccCcchh-----------hhhHHHH-
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFVGE-LS-LKRWVNDLLPVSLVEVVDKSLLSGEEKH-----------FAAKEQC- 941 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~dv~~~~g~~~~~i~~~~~~~~~~~~-----------~~~~~~~- 941 (985)
.. .........+||+.|+|||++.+.. |. .+.|+ |++|++++.|+.|..++..... +..+..+
T Consensus 171 ~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDv-WS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~ 247 (370)
T KOG0583|consen 171 SP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADV-WSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL 247 (370)
T ss_pred cC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhh-hhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC
Confidence 63 2233455678999999999999877 75 67788 9999999999999998876431 1123334
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 942 LLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
..++..++.+|+..+|.+|+++.+++ .-.-+++
T Consensus 248 S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 248 SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhcc
Confidence 78889999999999999999999998 4444443
No 34
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=312.29 Aligned_cols=248 Identities=25% Similarity=0.344 Sum_probs=201.5
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHh--cCCCCeeeEEeeeecCC----ceE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKN--IRHRNLVKIISSCSNDD----FKA 798 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~h~niv~l~~~~~~~~----~~~ 798 (985)
.+..+..++||+|+||.||+|.+. ++.||||++... +.+.|..|-+|++. ++|+||++|+++-...+ +++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 345556688999999999999996 699999999744 45678888888775 58999999999876655 789
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh------cCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF------GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~------~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
+|+||.+.|+|.++++.+ ..+|....+|+.-+++||+|||+ .|+++|+|||||++|||+..|+++.|+|||+
T Consensus 285 LVt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999999986 58999999999999999999996 3678899999999999999999999999999
Q ss_pred ceeccCCCCcceeccccccccccccccccc------Cccchhhhcccccccchhhhccccccc--Ccchhhhh-------
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFV------GELSLKRWVNDLLPVSLVEVVDKSLLS--GEEKHFAA------- 937 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~dv~~~~g~~~~~i~~~~~~~--~~~~~~~~------- 937 (985)
|..+............+||.+|||||++.+ ...-.+.|| |++|.++||++..-... +..+.+..
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~Dv-YamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDV-YAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHH-HHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 999876555555556789999999998643 122234588 99999999998754332 22211110
Q ss_pred ----H----------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhcc
Q 001988 938 ----K----------------------EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLSK 979 (985)
Q Consensus 938 ----~----------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~~ 979 (985)
. ...+..+.+.+..||..||+.|.|+.=+.+++.++..-.+.
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 0 01346678899999999999999999999999998875543
No 35
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=324.80 Aligned_cols=234 Identities=24% Similarity=0.378 Sum_probs=206.4
Q ss_pred ccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 728 FAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
....+.+|.|+.|.||+|+.+ ++.||||+++.-. +.+|+=|++++||||+.|.|+|...-.++||||||+.|
T Consensus 126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 345678999999999999997 7889999876331 35778899999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecc
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 887 (985)
-|...++... .++......|..+||.|+.|| |.+.|||||||.-||||..+..|||+|||-++...+. .....
T Consensus 198 qL~~VLka~~-~itp~llv~Wsk~IA~GM~YL---H~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMS 270 (904)
T KOG4721|consen 198 QLYEVLKAGR-PITPSLLVDWSKGIAGGMNYL---HLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMS 270 (904)
T ss_pred cHHHHHhccC-ccCHHHHHHHHHHhhhhhHHH---HHhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhh
Confidence 9999999865 677888889999999999999 7889999999999999999999999999999876533 33456
Q ss_pred cccccccccccccccCccchhhhcccccccchhhhcccccccCcch-------------hhhhHHHHHHHHHHHHHHccC
Q 001988 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-------------HFAAKEQCLLSIFSLALECTM 954 (985)
Q Consensus 888 ~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~l~~l~~~cl~ 954 (985)
++||..|||||++...+.+.+.|+ |+||+++|||+++++++.+.. ..+.+..|++.+.-+++.||+
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDI-wSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~ 349 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDI-WSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN 349 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccce-ehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence 789999999999999999999999 999999999999998876542 334577899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhHhhh
Q 001988 955 ESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 955 ~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
.+|..||++++++..|.-+..++
T Consensus 350 sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 350 SKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred cCCCCCccHHHHHHHHhhcCHHH
Confidence 99999999999999997766544
No 36
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-35 Score=324.76 Aligned_cols=247 Identities=26% Similarity=0.401 Sum_probs=206.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc--CC---cEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE--DG---VEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDF 796 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~--~~---~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~ 796 (985)
-++....++||+|+||+||+|+++ ++ ..||||..+... .....++.+|+++|++++|||||++||++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 344555689999999999999865 22 238999988532 3456789999999999999999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
.++|||+|+||+|.+++...+..++..++.+++.++|.||+|| |++++|||||.++|+|++.++.+||+|||+++.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YL---h~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYL---HSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHH---HHCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 9999999999999999999877899999999999999999999 8999999999999999999999999999998753
Q ss_pred cCCCCcceec-ccccccccccccccccCccchhhhcccccccchhhhccc-ccccCcch-------------hhhhHHHH
Q 001988 877 SGEDESTMRT-QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK-SLLSGEEK-------------HFAAKEQC 941 (985)
Q Consensus 877 ~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~~-------------~~~~~~~~ 941 (985)
. ...... ...-..+|+|||.+..+.++.++|| |++|+.+||++.. .-++..-. +...+...
T Consensus 313 ~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV-~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~ 388 (474)
T KOG0194|consen 313 S---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDV-WSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKT 388 (474)
T ss_pred c---ceeeccccccCcceecChhhhccCccccccch-hheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCC
Confidence 2 111111 2235678999999999999999999 8999999999883 22222111 11223456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 942 LLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
+.++..++.+||..+|++||+|.++.+.++.+.+...
T Consensus 389 p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 389 PKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 7889999999999999999999999999999887644
No 37
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4e-36 Score=322.16 Aligned_cols=235 Identities=26% Similarity=0.338 Sum_probs=205.1
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+... .+.+.+++|++|++.++|||||.++++|+...++++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778889999999999999865 778899999976533 346678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+.| +|+.++...+ .++++.+..++.|++.||.|| |+.+|+|||+||+||+++..|++|++|||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yL---hs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYL---HSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--NT 154 (808)
T ss_pred hhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHH---HhcCcccccCCcceeeecCCCceeechhhhhhhccc--Cc
Confidence 9976 9999998765 688999999999999999999 899999999999999999999999999999998753 34
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh-----------hhHHHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-----------AAKEQCLLSIFSLALE 951 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-----------~~~~~~~~~l~~l~~~ 951 (985)
...+.+.|||.|||||.+.++.|+..+|. |++|++++|+..|+.++-..... ..+......+..+++.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDl-WslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~g 233 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDL-WSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQG 233 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhH-HHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHH
Confidence 45677889999999999999999999999 99999999999988765433111 1223456778999999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 001988 952 CTMESPEKRIDAKDTIT 968 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~ 968 (985)
.+..||.+|.+..+++.
T Consensus 234 LL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 234 LLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HhhcChhhcccHHHHhc
Confidence 99999999999988764
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.4e-35 Score=316.54 Aligned_cols=233 Identities=23% Similarity=0.300 Sum_probs=193.7
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
..++|....+||+|+||+||+|+-+ +|..+|+|++++... ...+.++.|-.+|....+|.||++|..|++.++.|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5578999999999999999999854 799999999987632 335667899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+||||+...|...+ .+++.....++.+++-|++.+ |..|+|||||||+|+|||..|++||+|||+++-+...
T Consensus 219 iMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~i---H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESI---HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHH---HHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 999999999999998775 788899999999999999999 8999999999999999999999999999998543210
Q ss_pred ----------------------CCc-----------------------ceecccccccccccccccccCccchhhhcccc
Q 001988 880 ----------------------DES-----------------------TMRTQTLATIGYMAPDEIFVGELSLKRWVNDL 914 (985)
Q Consensus 880 ----------------------~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~ 914 (985)
+.. ......+|||.|||||++.+..|+..+|. |+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw-WS 373 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW-WS 373 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH-HH
Confidence 000 00123579999999999999999888887 99
Q ss_pred cccchhhhcccccccCcchhh---------------hhHHHHHHHHHHHHHHccCCCCCCCCC
Q 001988 915 LPVSLVEVVDKSLLSGEEKHF---------------AAKEQCLLSIFSLALECTMESPEKRID 962 (985)
Q Consensus 915 ~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~l~~l~~~cl~~~P~~RPt 962 (985)
+|++++|++.|..++...... +....+.++..++|.+|+. ||++|-.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999887765443211 1122345778888888887 8888876
No 39
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.6e-37 Score=334.93 Aligned_cols=368 Identities=27% Similarity=0.458 Sum_probs=205.2
Q ss_pred ceEEEcccccCC-CccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEcc
Q 001988 196 LQELHLGYNNLS-GAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLY 274 (985)
Q Consensus 196 L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 274 (985)
.+-.|+++|.++ +..|.....+++++.|.|...++. .+|++++.+++|++|.+++|++. .+-..+..++.|+.+++.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 344455555554 334445555555555555555554 45555555555555555555554 333444455555555555
Q ss_pred CCcCcc-cCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcccC
Q 001988 275 NNSLSG-SLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTS 353 (985)
Q Consensus 275 ~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 353 (985)
+|++.. -+|..+| .+..|+.||||+|++. ..|..+....++.+|+||+|+|..+..+.|-+|+.|-.|||++|++..
T Consensus 87 ~N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~ 164 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEM 164 (1255)
T ss_pred ccccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhh
Confidence 555542 2444443 4555555555555555 455555666666666666666664444555666666666666666666
Q ss_pred CCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEccCCCCC-CC
Q 001988 354 STPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLS-GS 432 (985)
Q Consensus 354 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~ 432 (985)
++|. ...+..|++|+|++|++...-- ..+..+++|++|.+++.+=+ ..
T Consensus 165 LPPQ------~RRL~~LqtL~Ls~NPL~hfQL-------------------------rQLPsmtsL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 165 LPPQ------IRRLSMLQTLKLSNNPLNHFQL-------------------------RQLPSMTSLSVLHMSNTQRTLDN 213 (1255)
T ss_pred cCHH------HHHHhhhhhhhcCCChhhHHHH-------------------------hcCccchhhhhhhcccccchhhc
Confidence 5553 3455566666666666543211 11223455556666555432 24
Q ss_pred CCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCc
Q 001988 433 IPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNL 512 (985)
Q Consensus 433 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 512 (985)
+|.++.++.+|..+|||.|.+. .+|+.+.++++|+.|+||+|+|+ ....+.....+|+.|+||.|+++ .+|.++..+
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 5666777777777777777776 67777777777777777777776 34445555667777777777776 356655555
Q ss_pred cceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEec
Q 001988 513 KDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDL 592 (985)
Q Consensus 513 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 592 (985)
+.|+.|++.+|+++-. -+|..++.|.+|+.+..++|.+. .+|+.+..+..|+.|.|
T Consensus 291 ~kL~kLy~n~NkL~Fe-----------------------GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L 346 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFE-----------------------GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKL 346 (1255)
T ss_pred HHHHHHHhccCccccc-----------------------CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcc
Confidence 5555555555555311 23444555555555555555554 45555555555555555
Q ss_pred CCCcccCCCCccccccccccccccccccccCCCC
Q 001988 593 SNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIP 626 (985)
Q Consensus 593 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 626 (985)
+.|+|. .+|+.+.-|+.|+.||+..|+=--.+|
T Consensus 347 ~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 347 DHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred ccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 555554 455555555555555555554443333
No 40
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.8e-34 Score=319.01 Aligned_cols=242 Identities=24% Similarity=0.420 Sum_probs=197.1
Q ss_pred cCccCCceeeccCceeEEEEEEcC-----------------CcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLED-----------------GVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKI 787 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l 787 (985)
++|...+.||+|+||.||+|.+++ +..||+|.+...... ....+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568888999999999999997532 346999998765333 34678999999999999999999
Q ss_pred EeeeecCCceEEEEeccCCCChHHHhhcCC------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 001988 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSN------------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849 (985)
Q Consensus 788 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH 849 (985)
++++.+.+..++||||+++|+|.+++.... ..+++....+++.|++.||+|| |+.||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH---HHCCccc
Confidence 999999999999999999999999886431 2467888999999999999999 7899999
Q ss_pred CCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhccc--cc
Q 001988 850 CDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK--SL 927 (985)
Q Consensus 850 rDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~--~~ 927 (985)
|||||+||++++++.+||+|||+++.+.............++..|+|||.+..+.++.++|+ |++|+.+++++++ ..
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~~l~el~~~~~~~ 240 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDV-WAFGVTLWEILMLCKEQ 240 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhh-HHHHHHHHHHHHccCCC
Confidence 99999999999999999999999987643332222333456889999999998999999999 9999999998753 22
Q ss_pred ccCcchhhh-------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 928 LSGEEKHFA-------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 928 ~~~~~~~~~-------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
+........ .+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 222111100 11234577999999999999999999999998875
No 41
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-36 Score=314.82 Aligned_cols=237 Identities=26% Similarity=0.336 Sum_probs=204.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..|...+.||+|.||.||+|... +++.||+|++..... .+...+++|+.++.+++++||.++|+.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45677789999999999999854 788899999987643 3467789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+.||++.+.++... .+++....-++.++..|+.|+ |.++.+|||||+.||++..+|.||++|||.+..+... ..
T Consensus 93 ~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~yl---H~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~--~~ 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYL---HSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT--VK 166 (467)
T ss_pred hcCcchhhhhccCC-CCccceeeeehHHHHHHhhhh---hhcceecccccccceeEeccCcEEEEecceeeeeech--hh
Confidence 99999999998764 447777788999999999999 8999999999999999999999999999999876432 23
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch------------hhhhHHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK------------HFAAKEQCLLSIFSLALE 951 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~------------~~~~~~~~~~~l~~l~~~ 951 (985)
....++|||.|||||++....|+.+.|+ |++|+.++|+..|+.+..... .+.....+...+.+++..
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADI-WSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~ 245 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADI-WSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEA 245 (467)
T ss_pred ccccccccccccchhhhccccccchhhh-hhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHH
Confidence 3467889999999999999999999999 999999999999987654321 111122577889999999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 001988 952 CTMESPEKRIDAKDTITR 969 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~ 969 (985)
|+..+|+.||+|.++++.
T Consensus 246 CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 246 CLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HhhcCcccCcCHHHHhhh
Confidence 999999999999998863
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-35 Score=322.25 Aligned_cols=237 Identities=25% Similarity=0.297 Sum_probs=207.5
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
+-|+.++-||+|+.|.|-+|++ .+|+.+|||++.+... .....+++|+-||+.++|||++++|++|+...++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4577788899999999999985 5999999999987622 22466899999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||++||.|++++-.++ .+++.+..++++||+.|+.|+ |..+|+|||+||+|+|+|..+.+||+|||+|..- .+
T Consensus 92 Eyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yC---H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe---~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYC---HAFNICHRDLKPENLLLDVKNNIKIADFGMASLE---VP 164 (786)
T ss_pred EecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHH---hhhcceeccCCchhhhhhcccCEeeeccceeecc---cC
Confidence 9999999999998876 677778888999999999999 8899999999999999999999999999999873 23
Q ss_pred cceecccccccccccccccccCccc-hhhhcccccccchhhhcccccccCcch-----------hhhhHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELS-LKRWVNDLLPVSLVEVVDKSLLSGEEK-----------HFAAKEQCLLSIFSLA 949 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~dv~~~~g~~~~~i~~~~~~~~~~~-----------~~~~~~~~~~~l~~l~ 949 (985)
.......||+|.|.|||++++.+|. .++|| |+-|++++.+++|+++++++. .++-+...+.+..+++
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDV-WSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLL 243 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDV-WSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLL 243 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCcccc-chhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHH
Confidence 3445667899999999999999885 67888 999999999999999988663 2233445678899999
Q ss_pred HHccCCCCCCCCCHHHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~L 970 (985)
++|+..||++|.|+.||.+.-
T Consensus 244 r~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 244 RRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHhccCccccccHHHHhhCc
Confidence 999999999999999998754
No 43
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-35 Score=322.17 Aligned_cols=232 Identities=23% Similarity=0.268 Sum_probs=200.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 798 (985)
..++|...++||+|.||+|++|..+ +++.+|||++++.. ..+.+..+.|.+|+... +||.+++++.+|++.++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4477888999999999999999976 78889999999873 34567788999998887 5999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+||||+.||++..+.+ ...+++....-+|..|+.||+|| |++||||||||.+|||+|.+|++||+|||+++.--
T Consensus 446 fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fL---H~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m- 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFL---HENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM- 519 (694)
T ss_pred EEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHH---HhcCceeeecchhheEEcccCcEEecccccccccC-
Confidence 9999999999544433 34689999999999999999999 89999999999999999999999999999998742
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFS 947 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~ 947 (985)
.....+.++||||.|||||++.+..|+.+.|. |++|+.++||+.|+.++..+.+.+. |..++.+...
T Consensus 520 -~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDW-W~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~ 597 (694)
T KOG0694|consen 520 -GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDW-WGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIA 597 (694)
T ss_pred -CCCCccccccCChhhcChhhhccCcccchhhH-HHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHH
Confidence 23345678999999999999999999988887 9999999999999987765433322 2236788999
Q ss_pred HHHHccCCCCCCCCCH
Q 001988 948 LALECTMESPEKRIDA 963 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~ 963 (985)
++++.+..+|++|-.+
T Consensus 598 il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHhccCcccccCC
Confidence 9999999999999977
No 44
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2e-34 Score=327.08 Aligned_cols=245 Identities=21% Similarity=0.347 Sum_probs=200.2
Q ss_pred hcCccCCceeeccCceeEEEEEE------cCCcEEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARL------EDGVEIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDF 796 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~ 796 (985)
.++|+..+.||+|+||.||+|.+ +++..||||+++... ....+.+.+|+++++.+ +||||++++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788899999999999999963 246689999987543 23456788999999999 89999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCC-----------------------------------------------------------
Q 001988 797 KALVLEYMSNGSLEDCLHSSN----------------------------------------------------------- 817 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 817 (985)
.++||||+++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999986431
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 818 ---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 818 ---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
..+++..+.+++.||++||+|| |+++|+||||||+||++++++.+||+|||+++.+......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1467888999999999999999 7899999999999999999999999999999876433322
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-------------hhHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------------AAKEQCLLSIFSL 948 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------------~~~~~~~~~l~~l 948 (985)
.......++..|+|||.+.+..++.++|+ |++|+.++++++ +..+....... ..+...+.++.++
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi-~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 349 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDV-WSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDI 349 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCH-HHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHH
Confidence 22222345678999999999999999999 999999999986 55443221111 0112245679999
Q ss_pred HHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 949 ALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+.+||+.||++||++.|+++.|++.
T Consensus 350 i~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 350 MKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHccCChhHCcCHHHHHHHHHhh
Confidence 9999999999999999999999863
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-35 Score=318.96 Aligned_cols=238 Identities=25% Similarity=0.324 Sum_probs=209.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc-eEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDF-KALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~-~~lv~ 801 (985)
++|...+.+|+|+||.++.++++ +++.||+|.+.... ........+|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999999865 78899999987653 3345578899999999999999999999999988 99999
Q ss_pred eccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 802 EYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
+||+||++.+.+.... ..+++..+..|+.|++.|+.|| |+.+|+|||||++||++++++.|||+|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~yl---H~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYL---HENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH---HhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998764 6789999999999999999999 79999999999999999999999999999999985333
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh------------hhhHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH------------FAAKEQCLLSIFSL 948 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~------------~~~~~~~~~~l~~l 948 (985)
....+.+||+.||.||.+.+.+|..++|+ |++|++++|+.+-+..+....- .+.+..+..++..+
T Consensus 161 --~~a~tvvGTp~YmcPEil~d~pYn~KSDi-WsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~l 237 (426)
T KOG0589|consen 161 --SLASTVVGTPYYMCPEILSDIPYNEKSDI-WSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSL 237 (426)
T ss_pred --hhhheecCCCcccCHHHhCCCCCCccCcc-hhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHH
Confidence 34566789999999999999999999999 9999999999987765544321 22345567889999
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+..|++.+|..||++.+++.+
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999988
No 46
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.6e-35 Score=294.95 Aligned_cols=237 Identities=23% Similarity=0.272 Sum_probs=196.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~l 799 (985)
.++|+..+.|++|+||.||+|+++ +++.||+|+++.+... ..-...+||.+|.+++|||||.+-.+.... +..||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 356777899999999999999965 7888999999866322 233457999999999999999999887543 56899
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
|||||+. ||...++.-..++...++..++.|+++|++|| |...|+|||+|++|+|+...|.+||+|||+|+.+..+
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~l---H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHL---HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHH---hhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999976 99999998878899999999999999999999 8999999999999999999999999999999998643
Q ss_pred CCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhhH--------------------
Q 001988 880 DESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAK-------------------- 938 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~-------------------- 938 (985)
. ...+..+-|.+|+|||.+.+ ..|+.+.|+ |++||++.|++.++.........++.
T Consensus 231 ~--k~~T~lVVTLWYRaPELLLG~~tyst~iDM-WSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 231 L--KPYTPLVVTLWYRAPELLLGAKTYSTAVDM-WSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred c--ccCcceEEEeeecCHHHhcCCcccCcchhh-hhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 2 23455678999999998876 568899999 99999999998876544332211100
Q ss_pred ---------------------H--HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 939 ---------------------E--QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 939 ---------------------~--~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
. ...+.-++++...+.+||.+|.||.|.++
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0 02366788999999999999999999875
No 47
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=7.8e-37 Score=329.70 Aligned_cols=372 Identities=29% Similarity=0.443 Sum_probs=275.7
Q ss_pred ccccccceecccCCcCC-CCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhcccc
Q 001988 94 ANLSSLKSLDLSHNKLS-SNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYL 172 (985)
Q Consensus 94 ~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L 172 (985)
+-|+..+..|+++|.|+ +.+|.....+++++.|.|...++. .+|+++ +++.+|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-------------------------~vPeEL-~~lqkL 57 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-------------------------QVPEEL-SRLQKL 57 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-------------------------hChHHH-HHHhhh
Confidence 44667778888888888 468888888888888888777765 778887 678888
Q ss_pred ceecccCccccccCCcccCCCCCceEEEcccccCC-CccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecC
Q 001988 173 KHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLS-GAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGF 251 (985)
Q Consensus 173 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 251 (985)
++|.+++|++. .+-..++.|+.|+.+++..|++. .-||..+-.+..|..||||+|+++ +.|..+..-+++-+|+||+
T Consensus 58 EHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~ 135 (1255)
T KOG0444|consen 58 EHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSY 135 (1255)
T ss_pred hhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEccc
Confidence 88888888887 66777888888888888888885 347777888888888888888888 7888888888888888888
Q ss_pred CcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccc-cc
Q 001988 252 NNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFS-GF 330 (985)
Q Consensus 252 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~ 330 (985)
|+|..+....|-+++.|-.||||+|++. .+|..+- .+.+|++|+|++|.+.-.--..+..+++|++|.+++.+=+ ..
T Consensus 136 N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~R-RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 136 NNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIR-RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDN 213 (1255)
T ss_pred CccccCCchHHHhhHhHhhhccccchhh-hcCHHHH-HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhc
Confidence 8888444444557888888888888887 6776653 6778888888888766444445556677777777775532 35
Q ss_pred cCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccC
Q 001988 331 IPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIP 410 (985)
Q Consensus 331 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~ 410 (985)
+|..+..|.+|..+|++.|++...+. .+-++++|+.|+||+|+|+ .+....+.+. +|++|+++.|+++ .+|
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp~vPe------cly~l~~LrrLNLS~N~it-eL~~~~~~W~-~lEtLNlSrNQLt-~LP 284 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLPIVPE------CLYKLRNLRRLNLSGNKIT-ELNMTEGEWE-NLETLNLSRNQLT-VLP 284 (1255)
T ss_pred CCCchhhhhhhhhccccccCCCcchH------HHhhhhhhheeccCcCcee-eeeccHHHHh-hhhhhccccchhc-cch
Confidence 67777788888888888887776553 3566777788888888776 3334444444 6777777777777 667
Q ss_pred CcCCCCCCccEEEccCCCCC-CCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcC
Q 001988 411 KAIGNLSNLIVLSLGGNNLS-GSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLT 489 (985)
Q Consensus 411 ~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 489 (985)
++++.++.|+.|++.+|+++ .-+|..++.+.+|+.+..++|.+. .+|+.+|.+..|+.|.|+.|++- ..|.++.-++
T Consensus 285 ~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~ 362 (1255)
T KOG0444|consen 285 DAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLP 362 (1255)
T ss_pred HHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcC
Confidence 77777777777777777765 235677777777777777777776 77777777777777777777775 5677777777
Q ss_pred cCceEeeccceeeeecC
Q 001988 490 SLQYLNLGSNRFTFVIP 506 (985)
Q Consensus 490 ~L~~L~L~~N~l~~~~p 506 (985)
.|+.|||..|.=--..|
T Consensus 363 ~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 363 DLKVLDLRENPNLVMPP 379 (1255)
T ss_pred CcceeeccCCcCccCCC
Confidence 77777777775433333
No 48
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=309.35 Aligned_cols=234 Identities=21% Similarity=0.258 Sum_probs=198.3
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcch---HHHHHHHHHHHHhcCCCCeeeEEeeeec----CCceEEEEec
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST---LKSFEAECEVIKNIRHRNLVKIISSCSN----DDFKALVLEY 803 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~h~niv~l~~~~~~----~~~~~lv~e~ 803 (985)
...||+|++|.||+|.+ +|+.||||+++...... .+.+.+|++++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46799999999999998 58999999997653332 4677899999999999999999999876 3467899999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++|+|.+++.... .+++....+++.|++.|++|+ |+ .+++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~l---H~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNL---YKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHH---HhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999998754 688999999999999999999 55 588999999999999999999999999998754322
Q ss_pred ceeccccccccccccccccc--CccchhhhcccccccchhhhcccccccCcchhhh-------------hHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFV--GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------AKEQCLLSIFS 947 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------~~~~~~~~l~~ 947 (985)
....++..|+|||.+.+ ..++.++|+ |++|+.+++++++..++....... .+..+++++.+
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di-~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~ 253 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDI-YSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKC 253 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhh-hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHH
Confidence 22458899999999876 788999999 999999999999987765432111 12246788999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 948 LALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
++.+||+.||++||++.|+++.|+....
T Consensus 254 li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 254 IVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999988764
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.1e-34 Score=324.19 Aligned_cols=247 Identities=21% Similarity=0.333 Sum_probs=201.1
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhc-CCCCeeeEEeeeecCC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNI-RHRNLVKIISSCSNDD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~ 795 (985)
..++|+..+.||+|+||.||+|+.. ++..||+|+++..... ....+.+|+++++++ +|+||++++++|...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457889999999999999998742 3457999999765332 345688999999999 8999999999999999
Q ss_pred ceEEEEeccCCCChHHHhhcCC----------------------------------------------------------
Q 001988 796 FKALVLEYMSNGSLEDCLHSSN---------------------------------------------------------- 817 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 817 (985)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999886421
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 818 -----------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 818 -----------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
..+++....+++.||++||+|| |++||+||||||+||++++++.+||+|||+++.+..........
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 2367888899999999999999 78999999999999999999999999999998764332222222
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh-------------hHHHHHHHHHHHHHHc
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA-------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~-------------~~~~~~~~l~~l~~~c 952 (985)
...+++.|||||++....++.+.|+ |++|+.++++++ +..++....... .+...+.++.+++.+|
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~Dv-wSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 351 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDV-WSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMC 351 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccH-HHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHH
Confidence 2335678999999999999999999 999999999986 665443221100 1112357899999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhH
Q 001988 953 TMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L~~i~ 974 (985)
|..||.+||++.++++.|+++.
T Consensus 352 l~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 352 WNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999998863
No 50
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.4e-34 Score=308.73 Aligned_cols=237 Identities=33% Similarity=0.527 Sum_probs=193.8
Q ss_pred CCceeeccCceeEEEEEEc-----CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 730 ENNIIGIGGFGSVYRARLE-----DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 730 ~~~~ig~G~~g~V~~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..+.||.|+||.||+|.+. .+..||||.++..... ..+.+.+|++++++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999876 3577999999654333 467899999999999999999999999988889999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++|+|.+++... ...+++.++.+|+.||++||+|| |+.+++||||+++||+++.++.+||+|||++.........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~L---h~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYL---HSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHH---HHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999987 66789999999999999999999 6789999999999999999999999999999887433333
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLA 949 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~ 949 (985)
...........|+|||.+....++.++|| |++|+.++|+++ +..+....... ..+..++..+.+++
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDV-ysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 238 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDV-YSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLI 238 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHH-HHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHH
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccceeccchhHHHHHHH
Confidence 33344457889999999999999999999 999999999999 45544332111 12334678899999
Q ss_pred HHccCCCCCCCCCHHHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~L 970 (985)
.+||..+|++||++.+++++|
T Consensus 239 ~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 239 QQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHT-SSGGGS--HHHHHHHH
T ss_pred HHHcCCChhhCcCHHHHHhcC
Confidence 999999999999999999876
No 51
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.4e-34 Score=309.32 Aligned_cols=244 Identities=22% Similarity=0.320 Sum_probs=202.0
Q ss_pred hcCccCCceeeccCceeEEEEEEc----CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
..+|+..+.||+|+||.||+|.++ .+..||+|.++.... .....+.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888899999999999999753 456899999886533 234578899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++|+|.+++......+++.+++.++.|++.|++|| |++|++||||||+||+++.++.+|++|||.+......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l---H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 9999999999999987656789999999999999999999 7899999999999999999999999999987653221
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIF 946 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~ 946 (985)
. ........++..|+|||.+..+.++.++|+ |++|+.+++++. ++.+...... .+.+..++..+.
T Consensus 161 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd05064 161 A-IYTTMSGKSPVLWAAPEAIQYHHFSSASDV-WSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLH 238 (266)
T ss_pred c-hhcccCCCCceeecCHHHHhhCCccchhHH-HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHH
Confidence 1 111122335678999999999999999999 999999999764 6654432211 112334678899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 947 SLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+++.+||+.+|.+||++.++.+.|.++
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999998764
No 52
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=315.91 Aligned_cols=251 Identities=24% Similarity=0.394 Sum_probs=215.1
Q ss_pred HHHHHHhcCccCCceeeccCceeEEEEEEcC-CcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCce
Q 001988 719 FELLRATDNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~ 797 (985)
++|+....+...-.+||-|-||.||.|.|+. ...||||.++.+ .....+|.+|..+|+.++|||+|+++|+|...-.+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 3444444556667889999999999999873 567999999866 45678999999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 798 ALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
|||+|||..|+|.+|+++. +..++.-..+.+|.||+.|++|| ..+++|||||.++|+|+.++..|||+|||+++++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYL---EkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHH---HHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 9999999999999999876 33466667788999999999999 8999999999999999999999999999999998
Q ss_pred cCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc-------------hhhhhHHHHHH
Q 001988 877 SGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE-------------KHFAAKEQCLL 943 (985)
Q Consensus 877 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~-------------~~~~~~~~~~~ 943 (985)
.++. ++......-...|.|||-+....++.++|| |.||+.+||+.++.+..... .+.+.++.|++
T Consensus 416 tgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDV-WAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 416 TGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDV-WAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPP 493 (1157)
T ss_pred cCCc-eecccCccCcccccCcccccccccccchhh-HHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCH
Confidence 6433 333333445678999999999999999999 99999999999988743322 24456788999
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
.++++|+.||++.|.+||++.|+-+.++.+-+
T Consensus 494 kVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 99999999999999999999999999987654
No 53
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.9e-35 Score=299.36 Aligned_cols=238 Identities=24% Similarity=0.310 Sum_probs=203.6
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
-+|...+.+|+|.||.|-+|.. ..|+.||||.++++. .++.-.+++|++||..++||||+++|.+|+..+...|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 3566677899999999999984 689999999998763 334556899999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||..+|.|.||+.+.+ .+++.+...+++||+.|+.|+ |.++++|||+|.+|||+|+++++||+|||++..+.+
T Consensus 133 EYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYC---HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~--- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYC---HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD--- 205 (668)
T ss_pred EecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHH---hhccceecccchhheeecCCCCeeeeccchhhhhcc---
Confidence 9999999999999875 688999999999999999999 899999999999999999999999999999988753
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhhHHH----------HHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQ----------CLLSIFSLALE 951 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~l~~l~~~ 951 (985)
......+||+|-|.+||.+.+.+|....-.-|++|+.++-++-|.+++....+.....+ .+....-+|+.
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PSdA~gLIRw 285 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPSDASGLIRW 285 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCchHHHHHHH
Confidence 33456789999999999999998865544449999999999999988776533221111 23446669999
Q ss_pred ccCCCCCCCCCHHHHHHHH
Q 001988 952 CTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~L 970 (985)
|+..+|++|.|..||....
T Consensus 286 mLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 286 MLMVNPERRATIEDIASHW 304 (668)
T ss_pred HHhcCcccchhHHHHhhhh
Confidence 9999999999999998765
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-33 Score=315.19 Aligned_cols=230 Identities=25% Similarity=0.276 Sum_probs=194.4
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
+.||+|+||.||+|+.. +|+.||+|++++.. ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 78999999997542 223456788999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecc
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 887 (985)
+|.+++...+ .+++.....++.||+.||+|| |+.||+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYL---HSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Ccccc
Confidence 9999987654 688999999999999999999 78999999999999999999999999999987642221 12234
Q ss_pred cccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCCC
Q 001988 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTMES 956 (985)
Q Consensus 888 ~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~~ 956 (985)
.+||+.|+|||.+.+..++.++|+ |++|++++++++|..+........ .+...+.++.+++.+|+..|
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~Di-wSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDW-WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 233 (323)
T ss_pred eecCccccChhhhcCCCCCccccC-cccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCC
Confidence 569999999999999999999999 999999999999987654322111 12235678899999999999
Q ss_pred CCCCC-----CHHHHHH
Q 001988 957 PEKRI-----DAKDTIT 968 (985)
Q Consensus 957 P~~RP-----t~~ev~~ 968 (985)
|++|| ++.++++
T Consensus 234 P~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 234 PKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHcCCCCCCCHHHHHc
Confidence 99999 7888865
No 55
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.6e-33 Score=303.30 Aligned_cols=239 Identities=23% Similarity=0.365 Sum_probs=200.5
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
++|...+.||+|+||.||+|+++++..+|+|.+... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457788999999999999999988889999988644 2334678899999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+|+|.++++.....+++..+..++.|++.||+|| |+.||+||||||+||++++++.+|++|||.++....... ...
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYL---ERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-ecc
Confidence 9999999986555689999999999999999999 789999999999999999999999999999886532221 112
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh------------hHHHHHHHHHHHHHHc
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~------------~~~~~~~~l~~l~~~c 952 (985)
....++..|+|||.+....++.++|+ |++|+.++++++ ++.+........ .+...+.++.+++.+|
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di-~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c 237 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDV-WSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSC 237 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhh-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence 22335678999999988889999999 999999999998 665443321111 1222456789999999
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITRL 970 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L 970 (985)
|..+|++||++.|+++.|
T Consensus 238 ~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 238 WHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ccCCcccCcCHHHHHHhh
Confidence 999999999999999876
No 56
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=298.42 Aligned_cols=231 Identities=26% Similarity=0.373 Sum_probs=187.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-----ceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD-----FKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~-----~~~l 799 (985)
-.|...+++|+|+||.||+|... ++.+||||++-.+.. ---+|+.+|+++.|||||++..+|.... ...+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 35677889999999999999854 678999999865522 1247999999999999999998885432 3458
Q ss_pred EEeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCcee
Q 001988 800 VLEYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAKL 875 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla~~ 875 (985)
||||+|. +|.+.++.. +..++...++-+.+||.+||+|| |+.||+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL---h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL---HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH---HhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999976 999988852 45677778888999999999999 78999999999999999976 8999999999999
Q ss_pred ccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh-----------------
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------- 937 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------- 937 (985)
+...... .....|..|+|||.+++ ..|+.+.|+ ||.|+++.|++.|...+......++
T Consensus 176 L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDi-WSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 176 LVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDI-WSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred eccCCCc---eeEEEeccccCHHHHcCccccCceeEE-hhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 8654443 33458899999998886 679999999 9999999999988875544321110
Q ss_pred -----------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -----------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -----------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+.+..+++.+++.++|.+|.++.|++.
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 0114578899999999999999999999875
No 57
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-33 Score=313.25 Aligned_cols=248 Identities=21% Similarity=0.350 Sum_probs=204.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCc----EEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGV----EIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
.+|+..+.||+|+||.||+|++. ++. .||+|.++.... ....++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999853 333 489999875432 3456788999999999999999999999765 4679
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
|+||+++|+|.+++......+++...++++.||+.||+|| |+++|+||||||+||++++++.+||+|||+++.+...
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 9999999999999988766788999999999999999999 7999999999999999999999999999999887543
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIF 946 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~ 946 (985)
..........++..|+|||.+....++.++|+ |++|+.++++++ +..+....+.. +.+..++.++.
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di-~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDV-WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY 241 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhh-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 33222223335678999999999999999999 999999999886 65554332211 11223567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 947 SLALECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
+++.+||..+|.+||++.+++..+.++.++..
T Consensus 242 ~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 242 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999998876543
No 58
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.7e-34 Score=322.10 Aligned_cols=248 Identities=22% Similarity=0.365 Sum_probs=202.9
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcC-CCCeeeEEeeeecCC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIR-HRNLVKIISSCSNDD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~ 795 (985)
..++|...+.||+|+||.||+|... .+..||||+++.... ...+.+.+|+++++++. ||||++++++|.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3568889999999999999999753 234699999975533 23467899999999996 999999999999999
Q ss_pred ceEEEEeccCCCChHHHhhcCC----------------------------------------------------------
Q 001988 796 FKALVLEYMSNGSLEDCLHSSN---------------------------------------------------------- 817 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 817 (985)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999999886431
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc
Q 001988 818 -------------------------------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD 860 (985)
Q Consensus 818 -------------------------------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~ 860 (985)
..+++..+.+++.|+++|++|| |+.+|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFL---ASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHhEEEe
Confidence 2367788899999999999999 789999999999999999
Q ss_pred CCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcch------
Q 001988 861 EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEK------ 933 (985)
Q Consensus 861 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~------ 933 (985)
+++.+||+|||+++.+.............+++.|+|||.+.+..++.++|+ |++|++++++++ +..+.....
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDV-WSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhH-HHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 999999999999987643333222333457788999999999999999999 999999999975 544432210
Q ss_pred -------hhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 934 -------HFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 934 -------~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
....+..++.++.+++.+||..+|++||++.++++.|+++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 NKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 011223456789999999999999999999999999987643
No 59
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.8e-33 Score=304.70 Aligned_cols=244 Identities=22% Similarity=0.391 Sum_probs=204.2
Q ss_pred cCccCCceeeccCceeEEEEEEc----CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
++|+..+.||+|+||.||+|.+. +...||||.++..... ....+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999874 2457999998755332 346788999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++++|.+++......+++..+.+++.|++.|++|| |+++|+||||||+||++++++.+||+|||+++.+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999999999987666789999999999999999999 78999999999999999999999999999999875222
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFS 947 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~ 947 (985)
.........+++.|+|||.+....++.++|+ |++|++++++++ +..+....... +.+..+++.+.+
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv-~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 239 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDV-WSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQ 239 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccch-HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 2222222345678999999998899999999 999999999886 65543221111 122345678999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 948 LALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
++.+|++.+|++||++.|+++.|.++
T Consensus 240 li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 240 LMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999875
No 60
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=294.44 Aligned_cols=234 Identities=25% Similarity=0.333 Sum_probs=208.3
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
|.+.+++|+|+||.||+|.++ +|..||||.+..+ .+.+++.+|+.|++++..|++|++||.+......|||||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 455678999999999999865 7999999998754 5678999999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+..+.++..++.+++.++..++...+.||+|| |...-||||||+-|||++.+|.+|++|||.|-.+.+ .-....
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YL---H~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKRN 187 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYL---HDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKRN 187 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHH---HHHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhhC
Confidence 999999999988999999999999999999999 678889999999999999999999999999877642 222345
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcc--------------hhhhhHHHHHHHHHHHHHHc
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE--------------KHFAAKEQCLLSIFSLALEC 952 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~l~~l~~~c 952 (985)
.+.|||.|||||++..-.|..+.|+ |++|+...||..|+.++.+. +.+..++..+.++-++++.|
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADI-WSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADI-WSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhH-hhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 5679999999999999999999999 99999999999988765432 34456888999999999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITR 969 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~ 969 (985)
+-.+|++|-||-++.+.
T Consensus 267 LiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCEH 283 (502)
T ss_pred hcCCHHHHHHHHHHhhh
Confidence 99999999999887653
No 61
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.4e-33 Score=307.36 Aligned_cols=249 Identities=26% Similarity=0.419 Sum_probs=207.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
..+|...+.||+|+||.||++... ++..||+|.+..........+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 356888899999999999999742 35669999987665555678999999999999999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEE
Q 001988 799 LVLEYMSNGSLEDCLHSSN------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~k 866 (985)
+||||+++++|.+++...+ ..+++.+++.++.|++.||+|| |++|++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l---H~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCcEE
Confidence 9999999999999987542 2489999999999999999999 789999999999999999999999
Q ss_pred EecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh----------
Q 001988 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF---------- 935 (985)
Q Consensus 867 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~---------- 935 (985)
|+|||+++...............+++.|+|||.+....++.++|+ |++|+.++++++ +..+.......
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi-wslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~ 239 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV-WSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 239 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987643332222233446788999999998899999999 999999999997 66543322111
Q ss_pred --hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 936 --AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 936 --~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
..+..++.++.+++.+||+.+|.+||++.|+.+.|+++.++.
T Consensus 240 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 240 VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 112235678999999999999999999999999999998753
No 62
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.7e-33 Score=308.02 Aligned_cols=235 Identities=22% Similarity=0.279 Sum_probs=197.3
Q ss_pred CccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|++++++++|++|+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999986 4799999999875422 223457889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 803 YMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|+++|+|.+++... ...+++..+..++.|++.||+|| |+++|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDL---QRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 99999999887653 33688999999999999999999 89999999999999999999999999999998764222
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh---------------hHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQCLLSIF 946 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~~~~~l~ 946 (985)
......||+.|+|||.+.+..++.+.|+ |++|++++++++|+.++....... .+...+.++.
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~Dv-wslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 233 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDW-WGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAK 233 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCc-hhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHH
Confidence 1234569999999999999999999999 999999999999987765322110 1122456789
Q ss_pred HHHHHccCCCCCCCCC-----HHHHHH
Q 001988 947 SLALECTMESPEKRID-----AKDTIT 968 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt-----~~ev~~ 968 (985)
+++++||+.||.+||+ +.++++
T Consensus 234 ~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 234 SICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 9999999999999997 777776
No 63
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=315.79 Aligned_cols=233 Identities=23% Similarity=0.270 Sum_probs=197.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57888899999999999999875 68899999987542 223456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYL---HSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred cCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-
Confidence 9999999999998654 678888899999999999999 78999999999999999999999999999998764221
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~l~~ 950 (985)
....||+.|+|||.+.+..++.++|+ |++|+++++++++..+......... +...+.++.+++.
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDW-WTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVK 247 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCccee-echHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHH
Confidence 23469999999999999999999999 9999999999999876543321111 1124567889999
Q ss_pred HccCCCCCCCCC-----HHHHHH
Q 001988 951 ECTMESPEKRID-----AKDTIT 968 (985)
Q Consensus 951 ~cl~~~P~~RPt-----~~ev~~ 968 (985)
+||..||.+||+ +.|++.
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhc
Confidence 999999999997 566663
No 64
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.9e-33 Score=312.78 Aligned_cols=238 Identities=22% Similarity=0.310 Sum_probs=199.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.++|+..+.||+|+||.||+|+.. ++..||+|.+..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367899999999999999999875 788899999876532 234678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+++|+|.+++.... .+++..+..++.|++.||.||| +..+|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH--~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh--hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 999999999997654 5788999999999999999994 2346999999999999999999999999998765322
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......||+.|+|||.+.+..++.++|+ |++|++++++++|+.+........
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~Di-wslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDI-WSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRP 235 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccc
Confidence 1233469999999999999999999999 999999999999886653211000
Q ss_pred ---------------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 937 ---------------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 937 ---------------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
.....+.++.+++.+||+.||++||++.|+++.-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 236 PGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0001356789999999999999999999998764
No 65
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=298.93 Aligned_cols=245 Identities=27% Similarity=0.340 Sum_probs=197.7
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---------c-----hHHHHHHHHHHHHhcCCCCeeeE
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---------S-----TLKSFEAECEVIKNIRHRNLVKI 787 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---------~-----~~~~~~~E~~il~~l~h~niv~l 787 (985)
+..++|...+.||+|.||.|-+|+.. +++.||||++.+... . ..+.+++||.||+++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999965 789999999975411 1 12478999999999999999999
Q ss_pred EeeeecC--CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcE
Q 001988 788 ISSCSND--DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 865 (985)
Q Consensus 788 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~ 865 (985)
+++..+. +..|||+|||..|.+...=.. ...++..+.++++++++.||+|| |.+|||||||||+|+|++++|+|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylrDvv~GLEYL---H~QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLRDVVLGLEYL---HYQGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEEcCCCcE
Confidence 9999875 678999999999877644322 22388999999999999999999 88999999999999999999999
Q ss_pred EEecccCceeccCC---CCcceecccccccccccccccccCc----cchhhhcccccccchhhhcccccccCcchhhh--
Q 001988 866 HLSDFGMAKLLSGE---DESTMRTQTLATIGYMAPDEIFVGE----LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-- 936 (985)
Q Consensus 866 kl~DfGla~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-- 936 (985)
||+|||.+..+... +........+|||.|+|||...++. .+.+.|+ |++|+.++-++.|+.++.......
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~Di-WalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDI-WALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhh-hhhhhhHHHhhhccCCcccchHHHHH
Confidence 99999998876322 1122234468999999999887743 2466788 999999999999988766543222
Q ss_pred -----------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 937 -----------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 937 -----------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
..++..+.+.+++.+++..||++|.+..||......
T Consensus 329 ~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 329 DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 112346778999999999999999999998765543
No 66
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-33 Score=315.11 Aligned_cols=234 Identities=21% Similarity=0.272 Sum_probs=200.3
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|+.. +++.||+|++++.. ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999976 68899999997542 223456789999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDAL---HELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 9999999999997654 678899999999999999999 789999999999999999999999999999986532
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-------------H------HHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-------------K------EQCL 942 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-------------~------~~~~ 942 (985)
......||+.|+|||.+.+..++.++|+ |++|+++++++++..+......... + ...+
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv-wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s 230 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDY-WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLS 230 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccce-ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccC
Confidence 2234569999999999999999999999 9999999999998876543211110 0 1236
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 943 LSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 943 ~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+++.+++.+|+..+|.+||++.++++.
T Consensus 231 ~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 231 DEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 788999999999999999999999864
No 67
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.5e-34 Score=295.14 Aligned_cols=242 Identities=24% Similarity=0.322 Sum_probs=198.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCC-eeeEEeeeecCC------
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRN-LVKIISSCSNDD------ 795 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~n-iv~l~~~~~~~~------ 795 (985)
..|...++||+|+||+||+|+.. +|+.||+|+++-.... ......+|+.++++++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 44666678999999999999854 8899999999866432 3456789999999999999 999999998776
Q ss_pred ceEEEEeccCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 796 FKALVLEYMSNGSLEDCLHSSN---CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
..++|+||++ -+|.+++.... ...+...++.+++|++.||+|| |+++|+||||||+||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~---H~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL---HSHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCcceEEECCCCcEeeeccch
Confidence 7889999995 59999998765 3577788999999999999999 899999999999999999999999999999
Q ss_pred ceeccCCCCcceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhh--------------
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-------------- 937 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-------------- 937 (985)
|+.+.-+.. ..+..++|..|.|||++++. .|+...|+ |++|+.+.||++++.++....+.++
T Consensus 167 Ara~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDi-Ws~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 167 ARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDI-WSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred HHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcch-HhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 997652222 24456799999999999987 78899999 9999999999987654433211110
Q ss_pred --------------------HH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHhH
Q 001988 938 --------------------KE-------QCLLSIFSLALECTMESPEKRIDAKDTITR--LLKIR 974 (985)
Q Consensus 938 --------------------~~-------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~--L~~i~ 974 (985)
+. .......+++.+|++++|.+|.++..++.. +.++.
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 00 012478899999999999999999999886 55543
No 68
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=309.41 Aligned_cols=243 Identities=23% Similarity=0.426 Sum_probs=208.8
Q ss_pred CccCCceeeccCceeEEEEEEcC---Cc--EEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLED---GV--EIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~~---~~--~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
.....++||.|-||.||+|.+.+ |. .||||.-+.+. ..+.+.|..|..+|++++|||||+++|+|.+. ..|||
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence 34556789999999999998642 33 38999888753 34567899999999999999999999999865 57899
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
||+++-|.|..+++.+...++..+...++.||+.||+|| |+.++|||||.++|||+.....||++|||+++.+.+..
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYL---eSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYL---ESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH---HhhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 999999999999999888899999999999999999999 89999999999999999999999999999999887555
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhccccc--ccCc-----------chhhhhHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL--LSGE-----------EKHFAAKEQCLLSIFS 947 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~--~~~~-----------~~~~~~~~~~~~~l~~ 947 (985)
.+.. +...-...|||||-+...+++.++|| |+||+++||++.-.+ +.+- ..+.+.++.|+..++.
T Consensus 546 yYka-S~~kLPIKWmaPESINfRrFTtASDV-WMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYs 623 (974)
T KOG4257|consen 546 YYKA-SRGKLPIKWMAPESINFRRFTTASDV-WMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYS 623 (974)
T ss_pred hhhc-cccccceeecCccccchhcccchhhH-HHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHH
Confidence 4433 33345678999999999999999999 999999999976332 2221 1355677889999999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 948 LALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
+|.+||.++|.+||++.++...|.++.+
T Consensus 624 lmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 624 LMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999887
No 69
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.6e-33 Score=300.59 Aligned_cols=242 Identities=24% Similarity=0.412 Sum_probs=204.2
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.++|+..++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 46788899999999999999998888899999987542 34568899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++|+|.+++... ...+++..+..++.|+++|++|| |+.+++||||||+||++++++.+||+|||+++....... .
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI---ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-T 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEecCCCcEEECCCccceecCCCce-e
Confidence 999999998754 44678899999999999999999 789999999999999999999999999999987643221 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
......++..|+|||.+..+.++.+.|+ |++|++++++++ +..+....... +....+++++.+++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 238 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDV-WSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMK 238 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhh-hhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 1222346778999999988889999999 999999999997 66654322111 111235678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
+|+..+|++||+++++.+.|++
T Consensus 239 ~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 239 TCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999999875
No 70
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-34 Score=292.81 Aligned_cols=240 Identities=25% Similarity=0.310 Sum_probs=200.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEec--cCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeec-----CC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFH--PQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN-----DD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~--~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~-----~~ 795 (985)
....|...+.||+|+||.|+.|..+ +|+.||||++. .+.....++..+|+++++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3455666789999999999999864 89999999997 4455567888999999999999999999998865 34
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
..|+|+|+| +-+|...++.+. .++.....-+++|+++||.|+ |+.+|+|||+||+|++++.++..||+|||+|+.
T Consensus 100 DvYiV~elM-etDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyi---HSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYI---HSANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchh---hcccccccccchhheeeccCCCEEeccccceee
Confidence 689999999 558998888763 588999999999999999999 899999999999999999999999999999999
Q ss_pred ccCCCCcceecccccccccccccccc-cCccchhhhcccccccchhhhcccccccCcchhhhhH----------------
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIF-VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAK---------------- 938 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~---------------- 938 (985)
..........+..+.|.+|.|||.+. ...|+...|+ |+.||.+.||++++..+......++.
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDi-WSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDI-WSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhh-hhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 86543344557778999999999875 4778999999 99999999999988755443211110
Q ss_pred --------------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 939 --------------------------EQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 939 --------------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.......++++.+|+..||.+|+|+.|+++.
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0133567889999999999999999998763
No 71
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=327.31 Aligned_cols=238 Identities=19% Similarity=0.183 Sum_probs=201.5
Q ss_pred CccCCceeeccCceeEEEEEEc-C-CcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-D-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~-~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.|...+.||+|+||.||+|... + ++.||+|.+..........+++|+.+++.++|||||++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888899999999999999754 4 6789999876554455567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 805 SNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 805 ~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
++|+|.+++... ...+++.....++.|++.||+|+ |+++|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV---HSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 34688999999999999999999 789999999999999999999999999999998754333
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSLA 949 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l~ 949 (985)
.......+||+.|+|||++.+..++.++|+ |++|+++++++++..+........ .+..++.++.+++
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv-~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 303 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADM-WSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALL 303 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHH
Confidence 233445679999999999999999999999 999999999999877654321111 1223567899999
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~ 968 (985)
.+||..+|++||++.+++.
T Consensus 304 ~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 304 DPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHhccChhhCcCHHHHHh
Confidence 9999999999999999875
No 72
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.9e-33 Score=305.59 Aligned_cols=236 Identities=21% Similarity=0.296 Sum_probs=195.0
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|...+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999865 788999999875432 2345678999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++ +|.+++...+..+++.....++.|+++||+|| |++||+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-- 158 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYC---HKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-- 158 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--
Confidence 975 99999887666688999999999999999999 789999999999999999999999999999976532221
Q ss_pred eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......+++.|+|||.+.+ ..++.++|+ |++|+.+++++++..++.......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDM-WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 1233468999999998865 568889999 999999999999876543211000
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.......+..+++.+|+..||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00012456789999999999999999999974
No 73
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-33 Score=310.68 Aligned_cols=234 Identities=25% Similarity=0.301 Sum_probs=198.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999875 789999999865421 23456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+||++++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYL---HSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 9999999999998654 678899999999999999999 7899999999999999999999999999999876321
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~ 950 (985)
.....||+.|+|||.+.+..++.++|+ |++|+++++++++..+........ .+......+.++++
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~ 230 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDW-WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIK 230 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHH
Confidence 123469999999999998889999999 999999999999887654432111 11224567899999
Q ss_pred HccCCCCCCCCC-----HHHHHHH
Q 001988 951 ECTMESPEKRID-----AKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt-----~~ev~~~ 969 (985)
+|+..||.+||+ +.|+++.
T Consensus 231 ~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 231 KLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHcCCCHHHccCCccCCHHHHhcC
Confidence 999999999995 7777654
No 74
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.8e-33 Score=305.53 Aligned_cols=248 Identities=25% Similarity=0.416 Sum_probs=207.3
Q ss_pred cCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
.+|...+.||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45778889999999999999742 456699999876655556789999999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc
Q 001988 800 VLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 864 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~ 864 (985)
||||+++++|.+++.... ..+++..+++++.|++.|++|| |++||+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCc
Confidence 999999999999997542 2478999999999999999999 8999999999999999999999
Q ss_pred EEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh--------
Q 001988 865 AHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------- 935 (985)
Q Consensus 865 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------- 935 (985)
+||+|||+++...............++..|+|||.+....++.++|+ |++|++++++++ +..+.......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 240 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV-WSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 240 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence 99999999986543322222233457889999999999999999999 999999999997 66654322111
Q ss_pred ----hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 936 ----AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 936 ----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
..+..++..+.+++.+||..+|++||++.++++.|.++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 241 GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 112235678999999999999999999999999999997754
No 75
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.7e-33 Score=306.25 Aligned_cols=243 Identities=26% Similarity=0.473 Sum_probs=201.4
Q ss_pred cCccCCceeeccCceeEEEEEEcC------CcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLED------GVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~------~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
++|+..+.||+|+||.||+|.... ...||+|.+..... .....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998642 25799999875533 23456889999999999999999999999988999
Q ss_pred EEEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC
Q 001988 799 LVLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~ 863 (985)
++|||+++|+|.+++.... ..+++.....++.|++.||+|| |+.+++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccccceEEEcCCC
Confidence 9999999999999987541 3578889999999999999999 789999999999999999999
Q ss_pred cEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcch---------
Q 001988 864 VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEK--------- 933 (985)
Q Consensus 864 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~--------- 933 (985)
.+||+|||+++...............+++.|+|||.+..+.++.++|+ |++|+.++++++ +..+.....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv-~slG~il~el~~~g~~p~~~~~~~~~~~~i~ 240 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDI-WSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR 240 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999999987643333223334457889999999998999999999 999999999986 543322111
Q ss_pred ---hhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 934 ---HFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 934 ---~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
....+..++.++.+++.+||+.+|.+||++.|++++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 241 SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 011234567899999999999999999999999999975
No 76
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.2e-33 Score=310.00 Aligned_cols=231 Identities=26% Similarity=0.299 Sum_probs=194.6
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 78999999997542 233457788999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecc
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 887 (985)
+|.+++.... .+++.+...++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYL---HSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMKT 154 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--cccccc
Confidence 9999887653 688999999999999999999 7999999999999999999999999999998764221 112234
Q ss_pred cccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHHHHHHccCCC
Q 001988 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFSLALECTMES 956 (985)
Q Consensus 888 ~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~l~~~cl~~~ 956 (985)
.+||+.|+|||.+.+..++.++|+ |++|++++++++|..++........ +...+.++.+++.+|+..|
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~Di-wslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDW-WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKD 233 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCc-cccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCC
Confidence 569999999999999999999999 9999999999999877643321111 1224567899999999999
Q ss_pred CCCCC-----CHHHHHHH
Q 001988 957 PEKRI-----DAKDTITR 969 (985)
Q Consensus 957 P~~RP-----t~~ev~~~ 969 (985)
|.+|| ++.|+++.
T Consensus 234 P~~R~~~~~~~~~~il~h 251 (328)
T cd05593 234 PNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHcCCCCCCCHHHHhcC
Confidence 99997 88888754
No 77
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=284.80 Aligned_cols=238 Identities=24% Similarity=0.343 Sum_probs=199.2
Q ss_pred HhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
..+.|+.-+.||+|+|+.||++.. .+|+.+|+|++... ...+.+.+.+|++|.+.++||||+++++.+.+.+..|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 456777888999999999999975 48999999988644 334567889999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc---CCCcEEEecccCceecc
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~---~~~~~kl~DfGla~~~~ 877 (985)
+|+|.|++|..-+-.. ...++...-.+++||++||.|+ |.++|||||+||+|+++. ..-.+|++|||+|..+.
T Consensus 89 Fe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yC---H~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYC---HSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 9999999998766544 3567888888999999999999 899999999999999994 34479999999999885
Q ss_pred CCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCc-chh--------------hhhHHHHH
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGE-EKH--------------FAAKEQCL 942 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~-~~~--------------~~~~~~~~ 942 (985)
........+|||+|||||++...+|+-..|+ |+-|++++-++.|.+++.. ... .+......
T Consensus 165 ---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDi-W~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is 240 (355)
T KOG0033|consen 165 ---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDI-WACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVT 240 (355)
T ss_pred ---CccccccccCCCcccCHHHhhcCCCCCcchh-hhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCC
Confidence 3344567789999999999999999999999 7788888888777765544 210 11223356
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 943 LSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 943 ~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++..+++++|+..||.+|.|+.|.+..
T Consensus 241 ~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 241 PEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred HHHHHHHHHHhccChhhhccHHHHhCC
Confidence 788999999999999999999998753
No 78
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-33 Score=310.65 Aligned_cols=228 Identities=24% Similarity=0.251 Sum_probs=191.3
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||.||+|+.. +++.||+|+++.. .......+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999865 6889999998753 223345678899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 889 (985)
.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... ......+
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENL---HKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFC 154 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccccc
Confidence 99997654 688999999999999999999 78999999999999999999999999999988643222 2233456
Q ss_pred cccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCCCCC
Q 001988 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTMESPE 958 (985)
Q Consensus 890 gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~~P~ 958 (985)
||+.|+|||.+.+..++.++|+ |++|++++++++|..++....... .+...+.++.+++.+||..||.
T Consensus 155 gt~~y~aPE~~~~~~~~~~~Dv-wslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 233 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDW-WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPT 233 (312)
T ss_pred CCcccCCHHHHcCCCCCCccce-echhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHH
Confidence 9999999999999999999999 999999999999987754332111 1223557789999999999999
Q ss_pred CCCC---HHHHHH
Q 001988 959 KRID---AKDTIT 968 (985)
Q Consensus 959 ~RPt---~~ev~~ 968 (985)
+||+ +.|++.
T Consensus 234 ~R~~~~~~~e~l~ 246 (312)
T cd05585 234 RRLGYNGAQEIKN 246 (312)
T ss_pred HcCCCCCHHHHHc
Confidence 9985 555543
No 79
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.6e-33 Score=303.94 Aligned_cols=243 Identities=28% Similarity=0.447 Sum_probs=202.1
Q ss_pred hcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~ 797 (985)
.++|...+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 356778899999999999999863 3478999998765444 457899999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc
Q 001988 798 ALVLEYMSNGSLEDCLHSSN-------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 864 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~ 864 (985)
++||||+++++|.+++...+ ..+++.+...++.|++.|++|| |++|++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeeccccccceEEEcCCCe
Confidence 99999999999999997542 3478889999999999999999 8899999999999999999999
Q ss_pred EEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh--------
Q 001988 865 AHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------- 935 (985)
Q Consensus 865 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------- 935 (985)
+||+|||+++...............+++.|+|||.+..+.++.++|+ |++|+.++++++ +..+.......
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV-WSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999986543322222233346788999999999999999999 999999999997 66554321111
Q ss_pred ----hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 936 ----AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 936 ----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
..+..++..+.+++.+||..+|++||++.|++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 112235678999999999999999999999999885
No 80
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.7e-33 Score=297.62 Aligned_cols=236 Identities=24% Similarity=0.362 Sum_probs=195.0
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999864 789999998865433 2346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 889 (985)
.+++...+..+++.+++.++.|+++||+|| |+.|++||||||+||+++.++.+||+|||++................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYL---ESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 999987666789999999999999999999 79999999999999999999999999999987653221111111112
Q ss_pred cccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHHHHHHccCCC
Q 001988 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFSLALECTMES 956 (985)
Q Consensus 890 gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~l~~~cl~~~ 956 (985)
.+..|+|||.+..+.++.++|+ |++|+.++++++ +..+...... ...++.++.++.+++.+|+..+
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDV-WSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYD 236 (252)
T ss_pred CceeecCchhhcCCCCChHHHH-HHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCC
Confidence 3567999999999999999999 999999999986 5544322111 1112335678999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 001988 957 PEKRIDAKDTITRLL 971 (985)
Q Consensus 957 P~~RPt~~ev~~~L~ 971 (985)
|++||++.++.++|+
T Consensus 237 p~~Rps~~~~~~~l~ 251 (252)
T cd05084 237 PGQRPSFSTVHQELQ 251 (252)
T ss_pred hhhCcCHHHHHHHHh
Confidence 999999999999876
No 81
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.4e-33 Score=310.96 Aligned_cols=230 Identities=25% Similarity=0.282 Sum_probs=193.5
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 78999999997542 223456778999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecc
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 887 (985)
+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccccc
Confidence 9999887654 688999999999999999999 78999999999999999999999999999987532211 12234
Q ss_pred cccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCCC
Q 001988 888 TLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTMES 956 (985)
Q Consensus 888 ~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~~ 956 (985)
..||+.|+|||.+.++.++.++|+ |++|+++++++++..+........ .+...++++.+++.+|+..|
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDW-WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 233 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhch-hhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCC
Confidence 569999999999999999999999 999999999999887654332111 12235678899999999999
Q ss_pred CCCCC-----CHHHHHH
Q 001988 957 PEKRI-----DAKDTIT 968 (985)
Q Consensus 957 P~~RP-----t~~ev~~ 968 (985)
|++|| ++.++++
T Consensus 234 P~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 234 PKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHhCCCCCCCHHHHHc
Confidence 99998 7888765
No 82
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.4e-33 Score=306.19 Aligned_cols=237 Identities=21% Similarity=0.259 Sum_probs=195.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|...+.||+|+||.||+|+.+ +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888999999999999999975 688899999875422 234567899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++++.+..+.. ....+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 155 (287)
T cd07848 81 YVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWC---HKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN- 155 (287)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-
Confidence 999876665443 344688999999999999999999 789999999999999999999999999999987643221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------- 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------- 937 (985)
.......|++.|+|||.+.+..++.++|+ |++|+.++++++|+.++........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDM-WSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhH-HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 12234568999999999999899999999 9999999999998865532211000
Q ss_pred ------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+.++.+++++|++.||++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0013456899999999999999999999875
No 83
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.1e-33 Score=304.29 Aligned_cols=245 Identities=28% Similarity=0.397 Sum_probs=200.4
Q ss_pred cCccCCceeeccCceeEEEEEEc-----CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCceE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-----DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFKA 798 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~~ 798 (985)
.+|+..+.||+|+||.||+|..+ +++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46778899999999999999742 578999999886655556788999999999999999999998754 34678
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+||||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||++++++.+||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~L---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYL---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 99999999999999987655789999999999999999999 789999999999999999999999999999987643
Q ss_pred CCCcce-ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh----------------------
Q 001988 879 EDESTM-RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------------- 935 (985)
Q Consensus 879 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------------- 935 (985)
...... .....++..|+|||.+.+..++.++|+ |++|+++++++++..........
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDV-WSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHH-HHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 322211 112224456999999988899999999 99999999998854322111000
Q ss_pred ------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 936 ------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 936 ------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
+.+..++.++.+++.+||..+|++||||.|+++.|+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 011234568999999999999999999999999998763
No 84
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.1e-33 Score=298.67 Aligned_cols=242 Identities=24% Similarity=0.412 Sum_probs=204.1
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.++|+..+.||+|+||.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688899999999999999998878899999987543 33567899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++.... ..+++..+.+++.|++.|+.|| |+.||+||||||+||++++++.+||+|||+++.+..... .
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL---EAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-E 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-c
Confidence 9999999997653 5689999999999999999999 789999999999999999999999999999988752221 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
.......+..|+|||.+....++.++|+ |++|+.++++++ ++.+....... +.+..++..+.+++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 238 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDV-WSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIML 238 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 1122223467999999998999999999 999999999998 76654332111 112335688999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
+|++.+|.+||++.++++.|++
T Consensus 239 ~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 239 DCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999975
No 85
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.3e-33 Score=302.91 Aligned_cols=245 Identities=26% Similarity=0.435 Sum_probs=208.2
Q ss_pred HHhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
+...+|...+.||.|+||.||+|...+++.||+|.+..........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567888999999999999999988899999999987655556788999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 803 YMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|+++|+|.+++... +..+++..+.+++.|++.|++|| |++|++||||||+||++++++.+||+|||.+........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL---EEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999999864 44689999999999999999999 789999999999999999999999999999987643221
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSL 948 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l 948 (985)
......++..|+|||.+....++.++|+ |++|++++++++ +..+....... +.+..+++.+.++
T Consensus 160 --~~~~~~~~~~~~~PE~~~~~~~~~~~Di-wslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (261)
T cd05148 160 --LSSDKKIPYKWTAPEAASHGTFSTKSDV-WSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKI 236 (261)
T ss_pred --cccCCCCceEecCHHHHccCCCCchhhH-HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHH
Confidence 1223346778999999988899999999 999999999997 56554332111 1123456789999
Q ss_pred HHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 949 ALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+.+||..+|.+||++.++++.|+.+
T Consensus 237 i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 237 MLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHcCCCchhCcCHHHHHHHHhcC
Confidence 9999999999999999999999753
No 86
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.6e-33 Score=309.90 Aligned_cols=237 Identities=22% Similarity=0.308 Sum_probs=197.4
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.++|+..+.||+|+||.||+|... ++..||+|.+..... .....+.+|++++++++||||+++++++.++++.++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468899999999999999999876 788899998876532 234678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+++|+|.+++...+ .+++.....++.|++.|++||| +..+|+||||||+||+++.++.+||+|||++..+....
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH--~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 158 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH--hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc--
Confidence 999999999997654 5788899999999999999994 24579999999999999999999999999987653221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------- 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------- 937 (985)
.....|+..|+|||.+.+..++.++|+ |++|+.++++++++.+.........
T Consensus 159 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 159 --ANSFVGTRSYMSPERLQGTHYSVQSDI-WSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred --cccCCCCccccCHHHhcCCCCCcHHHH-HHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCcc
Confidence 223468999999999998889999999 9999999999998765432110000
Q ss_pred -------------------H-------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 -------------------K-------------EQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 -------------------~-------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
. .....++.+++.+||+.||++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0 0123568899999999999999999999753
No 87
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.5e-33 Score=305.80 Aligned_cols=237 Identities=22% Similarity=0.310 Sum_probs=194.8
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 788999999875432 223467889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++ +++.+++......+++..+..++.|++.||+|| |++||+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYI---HQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-- 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--
Confidence 995 688888877666788999999999999999999 78999999999999999999999999999987653222
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-h-----------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-A----------------------- 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-~----------------------- 937 (985)
.......+|+.|+|||.+.+ ..++.++|+ |++|+.++++++|..++....... .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDM-WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 12233468999999998865 457888999 999999999999876654321100 0
Q ss_pred -----------H---H------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -----------K---E------QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -----------~---~------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+ . .....+.+++.+|+..||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0 0 01245778999999999999999999985
No 88
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.9e-33 Score=300.97 Aligned_cols=247 Identities=21% Similarity=0.361 Sum_probs=201.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCc----EEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGV----EIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
++|+..+.||+|+||.||+|.+. +++ +||+|.+..... ....++..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999864 444 478888754422 234567888889999999999999999864 45678
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
++||+++|+|.+++......+++.....++.|++.||+|| |+++++||||||+||++++++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYL---EEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 9999999999999987766789999999999999999999 7899999999999999999999999999999876433
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIF 946 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~ 946 (985)
..........++..|+|||.+..+.++.++|+ |++|+.++++++ +..+....... ..+..++..+.
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv-~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDV-WSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVY 241 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHH
Confidence 33222334457788999999999999999999 999999999987 66544322111 11223566788
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 947 SLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
+++.+||..+|.+||++.|+++.+..+.++.
T Consensus 242 ~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 242 MVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999887654
No 89
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.3e-33 Score=297.99 Aligned_cols=239 Identities=22% Similarity=0.346 Sum_probs=200.2
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
++|...+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4577888999999999999998777789999987543 334678999999999999999999999999889999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+|+|.+++......+++..+++++.|++.|++|| |+.|++||||||+||++++++.+||+|||.++....... ...
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYL---ESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSS 158 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-eec
Confidence 9999999987655789999999999999999999 789999999999999999999999999999887643221 111
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh------------hHHHHHHHHHHHHHHc
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~------------~~~~~~~~l~~l~~~c 952 (985)
....++..|+|||......++.++|+ |++|+.++++++ +..+........ .+...++.+.+++.+|
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di-~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 237 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDV-WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSC 237 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHH-HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 22335678999999988889999999 999999999987 665543321111 1122456799999999
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITRL 970 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L 970 (985)
|+.+|.+||++.++++.+
T Consensus 238 l~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 238 WHEKAEERPTFQQLLSSI 255 (256)
T ss_pred cCCCcccCCCHHHHHHhh
Confidence 999999999999999876
No 90
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.5e-33 Score=312.24 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=201.4
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecC-
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSND- 794 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~- 794 (985)
..++|+..+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.+++++ +|+||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3457889999999999999999632 357899999875432 2345678899999999 899999999988654
Q ss_pred CceEEEEeccCCCChHHHhhcCC---------------------------------------------------------
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSN--------------------------------------------------------- 817 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 817 (985)
...+++|||+++|+|.+++....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 56789999999999999886421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccccccccc
Q 001988 818 ---CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGY 894 (985)
Q Consensus 818 ---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y 894 (985)
..+++..+.+++.||+.||+|| |+.||+||||||+||++++++.+||+|||+++.+.............++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~l---H~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 2578999999999999999999 7899999999999999999999999999999876433322223334467789
Q ss_pred ccccccccCccchhhhcccccccchhhhcc-cccccCcchh-h------------hhHHHHHHHHHHHHHHccCCCCCCC
Q 001988 895 MAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH-F------------AAKEQCLLSIFSLALECTMESPEKR 960 (985)
Q Consensus 895 ~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~-~------------~~~~~~~~~l~~l~~~cl~~~P~~R 960 (985)
+|||++.+..++.++|+ |++|++++++++ +..++..... . ..+..+.+++.+++.+||..+|++|
T Consensus 242 ~aPE~~~~~~~~~~~Di-~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R 320 (337)
T cd05054 242 MAPESIFDKVYTTQSDV-WSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDR 320 (337)
T ss_pred cCcHHhcCCCCCccccH-HHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 99999999999999999 999999999986 6654432110 0 0112345789999999999999999
Q ss_pred CCHHHHHHHHHHhHh
Q 001988 961 IDAKDTITRLLKIRD 975 (985)
Q Consensus 961 Pt~~ev~~~L~~i~~ 975 (985)
|++.|+++.|+++.+
T Consensus 321 Ps~~ell~~l~~~~~ 335 (337)
T cd05054 321 PTFSELVEILGDLLQ 335 (337)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999998765
No 91
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.5e-33 Score=303.49 Aligned_cols=245 Identities=21% Similarity=0.336 Sum_probs=199.7
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDF 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~ 796 (985)
..++|+..+.||+|+||.||+|... ++..||+|++..... ....++.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999753 356799999865422 234568899999999999999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEE
Q 001988 797 KALVLEYMSNGSLEDCLHSSN---------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHL 867 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl 867 (985)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++|| |+.+++||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999987532 2357788899999999999999 7899999999999999999999999
Q ss_pred ecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-----------
Q 001988 868 SDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF----------- 935 (985)
Q Consensus 868 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~----------- 935 (985)
+|||+++...............+++.|+|||.+.++.++.++|+ |++|+.++++++ +..+.......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV-WSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL 239 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999876543222221222345788999999999999999999 999999999997 45443222110
Q ss_pred -hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 936 -AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 936 -~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
..+..+++.+.+++.+|++.+|++||++.|+++.+++
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 240 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1123356789999999999999999999999998763
No 92
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.3e-33 Score=311.52 Aligned_cols=235 Identities=22% Similarity=0.244 Sum_probs=198.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-C-CcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-D-GVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~-~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
.++|...+.||+|+||.||+|..+ + +..||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 357888999999999999999854 3 3689999986432 2234567899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++|+|.+++.... .+++..+..++.|++.||+|| |+.||+||||||+|||++.++.+||+|||+++.+...
T Consensus 109 v~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYL---QSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 999999999999998654 688999999999999999999 7899999999999999999999999999999876421
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSL 948 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l 948 (985)
.....||+.|+|||++.+..++.++|+ |++|+.++++++|..+........ .+...+..+.++
T Consensus 185 -----~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l 258 (340)
T PTZ00426 185 -----TYTLCGTPEYIAPEILLNVGHGKAADW-WTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHL 258 (340)
T ss_pred -----cceecCChhhcCHHHHhCCCCCccccc-cchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 123569999999999998889999999 999999999999987665432211 112245678899
Q ss_pred HHHccCCCCCCCC-----CHHHHHHH
Q 001988 949 ALECTMESPEKRI-----DAKDTITR 969 (985)
Q Consensus 949 ~~~cl~~~P~~RP-----t~~ev~~~ 969 (985)
+++|++.+|.+|+ ++.++.+.
T Consensus 259 i~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 259 MKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 9999999999995 78887653
No 93
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.8e-33 Score=297.44 Aligned_cols=239 Identities=26% Similarity=0.378 Sum_probs=199.4
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
.+|...+.||+|+||.||+|.++++..+|+|.+.... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 3577788999999999999998877889999986543 234578889999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+++|.+++......+++..+..++.|++.|++|| |+.+++||||||+||++++++.+||+|||+++...+... ...
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~~~ 158 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYL---ESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-TSS 158 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHhhEEECCCCcEEECCcccceecccccc-ccc
Confidence 9999999987655789999999999999999999 789999999999999999999999999999986532211 111
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh------------hHHHHHHHHHHHHHHc
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~------------~~~~~~~~l~~l~~~c 952 (985)
....++..|+|||.+....++.++|+ |++|++++++++ +..+........ .+..++.++.+++.+|
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di-~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 237 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDV-WSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSC 237 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhH-HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence 12224567999999998999999999 999999999997 565543221111 1123567899999999
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITRL 970 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L 970 (985)
|..+|++||++.|+++.|
T Consensus 238 l~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 238 WHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred hcCChhhCcCHHHHHHHh
Confidence 999999999999999876
No 94
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.8e-33 Score=301.96 Aligned_cols=249 Identities=21% Similarity=0.346 Sum_probs=204.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCc----EEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGV----EIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
.++|...+.||+|+||.||+|.+. +++ +||+|+++.... .....+.+|+.+++.+.||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 457888899999999999999853 444 489999875533 3356788999999999999999999999754 467
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
++|||+++|+|.+++......+++.+++.++.|+++||+|| |+++|+||||||+||++++++.+||+|||+++.+..
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYL---EEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999999987666789999999999999999999 799999999999999999999999999999987753
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSI 945 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l 945 (985)
...........+++.|+|||...+..++.++|+ |++|+.++|+++ +..+...... .+.+..++.++
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDV-WSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDV 240 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHH
Confidence 332222222335678999999999999999999 999999999887 5554432211 11123356788
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 946 FSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
.+++.+||..||++||++.++++.+.++.....
T Consensus 241 ~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 241 YMIMVKCWMIDSECRPRFRELVDEFSRMARDPS 273 (279)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999988876553
No 95
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.5e-33 Score=307.91 Aligned_cols=231 Identities=25% Similarity=0.270 Sum_probs=193.3
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
+.||+|+||.||+|... +++.||+|++++.. ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 78999999997542 223456778999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
+|.+++.... .+++..+..++.|++.||+|| |+ .||+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~l---H~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~ 154 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMK 154 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccc
Confidence 9999887654 688999999999999999999 65 7999999999999999999999999999876432221 223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
...||+.|+|||.+.+..++.++|+ |++|++++++++|..++....... .+...+.++.+++.+|+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~ 233 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDW-WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKK 233 (325)
T ss_pred cccCCcccCCHHHHccCCCCCcccc-ccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 4569999999999999999999999 999999999999987654332211 1123467789999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 001988 956 SPEKRI-----DAKDTITR 969 (985)
Q Consensus 956 ~P~~RP-----t~~ev~~~ 969 (985)
||++|+ ++.++++.
T Consensus 234 dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 234 DPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CHHHhCCCCCCCHHHHhcC
Confidence 999997 88888753
No 96
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=288.45 Aligned_cols=246 Identities=26% Similarity=0.389 Sum_probs=196.2
Q ss_pred HHhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhc--CCCCeeeEEeeeecC----Cc
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI--RHRNLVKIISSCSND----DF 796 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l--~h~niv~l~~~~~~~----~~ 796 (985)
....+....+.||+|.||+||+|.++ |..||||+|.. .+++.+.+|.+|++.+ +|+||+.|++.-..+ .+
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 34456778899999999999999997 89999999974 3557788999999875 999999999887544 35
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEeCCCCCCCEEEcCCCcEEEeccc
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF-----GHSTPIIHCDLKPSNVLLDEDMVAHLSDFG 871 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~-----~h~~~ivHrDlk~~Nill~~~~~~kl~DfG 871 (985)
.++|++|.+.|||+|+|... .++....++++.-+|.||++||. .-++.|.|||||++|||+.+++.+.|+|+|
T Consensus 284 LwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 78999999999999999974 68899999999999999999984 246779999999999999999999999999
Q ss_pred CceeccCCCCc--ceecccccccccccccccccCc-----cchh-hhcccccccchhhhcccccccCcc-----------
Q 001988 872 MAKLLSGEDES--TMRTQTLATIGYMAPDEIFVGE-----LSLK-RWVNDLLPVSLVEVVDKSLLSGEE----------- 932 (985)
Q Consensus 872 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~-----~~~~-~dv~~~~g~~~~~i~~~~~~~~~~----------- 932 (985)
+|......... ......+||.+|||||++-..- -+++ .|+ |+||.++||+...-.-.+..
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADI-YafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADI-YAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHH-HHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 99887543221 1234567999999999874322 1233 466 99999999987533221110
Q ss_pred hhhh----------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 933 KHFA----------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 933 ~~~~----------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
+..+ ....+...+.++|+.||..+|..|-||-.+-++|.++.+
T Consensus 441 p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 441 PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1111 122356789999999999999999999999999999875
No 97
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-32 Score=313.36 Aligned_cols=248 Identities=23% Similarity=0.346 Sum_probs=201.5
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcC-CCCeeeEEeeeecC
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIR-HRNLVKIISSCSND 794 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~-h~niv~l~~~~~~~ 794 (985)
...++|...+.||+|+||.||+|++. .++.||+|+++..... ....+.+|++++.++. ||||++++++|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34457888899999999999999853 3467999999765332 3457889999999997 99999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcCC---------------------------------------------------------
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSN--------------------------------------------------------- 817 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 817 (985)
+..++||||+++|+|.++++..+
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999999986531
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCE
Q 001988 818 ----------------------------------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNV 857 (985)
Q Consensus 818 ----------------------------------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Ni 857 (985)
..+++....+++.|++.||+|| |+.+++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCcCcccCCcceE
Confidence 1356777889999999999999 789999999999999
Q ss_pred EEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh
Q 001988 858 LLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA 936 (985)
Q Consensus 858 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~ 936 (985)
++++++.+||+|||+++.+.............+++.|+|||.+....++.+.|+ |++|+.++|+++ +..+....+...
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDV-WSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHH-HHHHHHHHHHHHcCCCCCCCCCchH
Confidence 999999999999999987543222222223457889999999998889999999 999999999987 554433221111
Q ss_pred -------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 937 -------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 937 -------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
.+..++.++.+++.+||..+|.+||+++|+++.|+++.
T Consensus 350 ~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11224578999999999999999999999999998763
No 98
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-34 Score=275.64 Aligned_cols=238 Identities=22% Similarity=0.267 Sum_probs=204.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
.++|..++.+|+|-||.||.|+.+ ++-.||+|++.+. ......++++|++|-..++||||.++|+++.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467889999999999999999865 6778999998654 233467899999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 801 LEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
+||.++|++...+... ...+++.....+..|+|.|+.|+ |.++||||||||+|+|++.++..|++|||-+..-.
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~---h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYC---HLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHh---ccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 9999999999999855 34588888899999999999999 89999999999999999999999999999876532
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSL 948 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l 948 (985)
.......|||..|.+||.+.+...+...|+ |++|+..+|++.|..++....... .+...+.+..++
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~-w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dl 252 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDL-WSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADL 252 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhH-HHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHH
Confidence 334566789999999999999999999999 999999999988876654432111 223356788999
Q ss_pred HHHccCCCCCCCCCHHHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~L 970 (985)
+.+|+..+|.+|.+..|++..-
T Consensus 253 I~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred HHHHhccCccccccHHHHhhhH
Confidence 9999999999999999998753
No 99
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.7e-33 Score=309.60 Aligned_cols=237 Identities=21% Similarity=0.258 Sum_probs=199.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999865 789999999975422 23456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++......+++.....++.|++.||+|| |+++|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSV---HQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 99999999999987756789999999999999999999 789999999999999999999999999999987653332
Q ss_pred cceecccccccccccccccc------cCccchhhhcccccccchhhhcccccccCcchhhh---------------hHHH
Q 001988 882 STMRTQTLATIGYMAPDEIF------VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQ 940 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~ 940 (985)
. ......||+.|+|||.+. ...++.++|+ |++|++++++++|..+........ ....
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di-wslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (330)
T cd05601 158 V-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDW-WSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPK 235 (330)
T ss_pred e-eeecccCCccccCHHHhccccccccCCCCCccee-ecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCC
Confidence 2 223346999999999886 4567789999 999999999999887654322111 1112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+.++.+++..|+. +|.+||++.+++.
T Consensus 236 ~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 236 VSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 46778999999997 9999999999875
No 100
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-32 Score=301.26 Aligned_cols=243 Identities=26% Similarity=0.413 Sum_probs=199.8
Q ss_pred cCccCCceeeccCceeEEEEEE-----cCCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-----EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
++|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4677889999999999999974 2567899999875432 234678899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC
Q 001988 800 VLEYMSNGSLEDCLHSS----------------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~----------------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~ 863 (985)
||||+++++|.+++... ...+++.+...++.|++.||+|| |++|++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhcCeehhccccceEEEcCCC
Confidence 99999999999998532 12467888999999999999999 789999999999999999999
Q ss_pred cEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh--------
Q 001988 864 VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH-------- 934 (985)
Q Consensus 864 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~-------- 934 (985)
.+||+|||+++...............++..|+|||.+.++.++.++|+ |++|+.++++++ +..+......
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 240 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDI-WSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR 240 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhh-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999999987643332222333446778999999988889999999 999999999997 6544322111
Q ss_pred ----hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 935 ----FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 935 ----~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
...++.+++++.+++.+||..+|++||++.++.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 241 KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11123357789999999999999999999999998864
No 101
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-32 Score=302.75 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=202.6
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecC
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSND 794 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~ 794 (985)
...++|+..+.||+|+||.||+|... +...||+|.+..... .....+.+|+++++++ +|+||+++++++..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34567888999999999999999864 236799999875432 3345688999999999 799999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 001988 795 DFKALVLEYMSNGSLEDCLHSS---------------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL 859 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill 859 (985)
+..++||||+++|+|.++++.. ...+++..+++++.|++.|++|| |+++|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHCCccccccceeeEEE
Confidence 9999999999999999998642 34688999999999999999999 78999999999999999
Q ss_pred cCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh---
Q 001988 860 DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF--- 935 (985)
Q Consensus 860 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~--- 935 (985)
++++.+||+|||+++.+.............++..|+|||.+....++.++|+ |++|+.++++++ +..+.......
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~~~~~~~~ 244 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDV-WSFGVLLWEIFTLGGSPYPGIPVEELF 244 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccce-eehhhHHHHHhcCCCCCCCCCCHHHHH
Confidence 9999999999999987654332222222335678999999998999999999 999999999886 54433221110
Q ss_pred ---------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 936 ---------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 936 ---------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
..+..++.++.+++.+|+.++|++||++.|+++.|+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 KLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 112234678999999999999999999999999998864
No 102
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=306.05 Aligned_cols=230 Identities=29% Similarity=0.381 Sum_probs=202.8
Q ss_pred eeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHH
Q 001988 733 IIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLED 811 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 811 (985)
++|+|.||+||.|++. +...+|||.+..+.....+.+..||..-++++|+|||+++|.|.++++.-|.||-+|||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999965 566799999988877778889999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc-CCCcEEEecccCceeccCCCCcceeccc
Q 001988 812 CLHSSNCAL--NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAHLSDFGMAKLLSGEDESTMRTQT 888 (985)
Q Consensus 812 ~l~~~~~~~--~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~ 888 (985)
.++...+++ .+.+.--+..||++||.|| |+..|||||||-+|||++ -.|.+||+|||-++++.+.. +.+..+
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYL---Hen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYL---HENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCTETF 736 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhh---hhcceeeccccCCcEEEeeccceEEecccccchhhccCC--cccccc
Confidence 999886677 6778888999999999999 899999999999999995 67899999999999886433 345567
Q ss_pred ccccccccccccccCc--cchhhhcccccccchhhhcccccccCcc--------------hhhhhHHHHHHHHHHHHHHc
Q 001988 889 LATIGYMAPDEIFVGE--LSLKRWVNDLLPVSLVEVVDKSLLSGEE--------------KHFAAKEQCLLSIFSLALEC 952 (985)
Q Consensus 889 ~gt~~y~aPE~~~~~~--~~~~~dv~~~~g~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~l~~l~~~c 952 (985)
.||..|||||++-.|+ |..+.|+ |++|+.+.||.+|+.++.+- .+++.+++..++...++.+|
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADI-WS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Filrc 815 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADI-WSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRC 815 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhh-hhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHH
Confidence 7999999999997654 6778899 99999999999999765432 24456778889999999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 001988 953 TMESPEKRIDAKDTIT 968 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~ 968 (985)
+.+||.+||+|+++++
T Consensus 816 Fepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 816 FEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCcccCccHHHhcc
Confidence 9999999999999885
No 103
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-33 Score=278.31 Aligned_cols=239 Identities=25% Similarity=0.321 Sum_probs=198.9
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--------hHHHHHHHHHHHHhc-CCCCeeeEEeeee
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--------TLKSFEAECEVIKNI-RHRNLVKIISSCS 792 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l-~h~niv~l~~~~~ 792 (985)
..-..|...+++|.|..+.|-++.++ +|.++|+|++...... -.+...+|++||+++ .||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 34566788889999999999998754 8899999998643211 134567899999998 6999999999999
Q ss_pred cCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 793 NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 793 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
.+..+++|+|.|+.|.|+|++.... .+++....+|+.|+.+|++|| |.++|||||+||+|||+|++.++||+|||+
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeyl---Ha~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYL---HARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHH---HHhhhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999999999864 688999999999999999999 899999999999999999999999999999
Q ss_pred ceeccCCCCcceecccccccccccccccc------cCccchhhhcccccccchhhhcccccccCcc--------------
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIF------VGELSLKRWVNDLLPVSLVEVVDKSLLSGEE-------------- 932 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~-------------- 932 (985)
|+.+.... .....||||+|.|||.+. ...|+-..|. |+.|+.++-++.|..++-..
T Consensus 170 a~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~-Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky 245 (411)
T KOG0599|consen 170 ACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDE-WACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY 245 (411)
T ss_pred eeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhH-HHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc
Confidence 99875333 345689999999999774 3456777788 88888888877766443221
Q ss_pred -hhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 933 -KHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 933 -~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
...+...+..+...+++.+|++.||.+|.|+.|+++.
T Consensus 246 qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 246 QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 1223455667888999999999999999999999863
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-32 Score=306.37 Aligned_cols=230 Identities=26% Similarity=0.319 Sum_probs=192.4
Q ss_pred ceeeccCceeEEEEEE----cCCcEEEEEEeccCC----cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 732 NIIGIGGFGSVYRARL----EDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+.||+|+||.||+++. .+++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 367889999987531 22345678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++|+|.+++...+ .+.+.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHL---HQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--T 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--C
Confidence 99999999997654 577888888999999999999 78999999999999999999999999999987643222 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHc
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~c 952 (985)
......||+.|+|||.+.+..++.++|+ |++|++++++++|..+........ .+...++++.+++.+|
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 234 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDW-WSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKL 234 (323)
T ss_pred cccccCCCccccChhhccCCCCCCccee-cccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 2234569999999999998889999999 999999999999987655432211 1223457789999999
Q ss_pred cCCCCCCCC-----CHHHHHH
Q 001988 953 TMESPEKRI-----DAKDTIT 968 (985)
Q Consensus 953 l~~~P~~RP-----t~~ev~~ 968 (985)
+..+|++|| ++.++++
T Consensus 235 l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 235 LKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred cccCHhHcCCCCCCCHHHHhc
Confidence 999999999 7777765
No 105
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-32 Score=296.29 Aligned_cols=242 Identities=24% Similarity=0.410 Sum_probs=201.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.+|...+.||+|+||.||+|..+ +++.||+|.+... .....++.+|++++++++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35777889999999999999865 6888999998754 334567899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++... ...+++..++.++.|+++||+|| |+.|++||||||+||++++++.+||+|||++........ .
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-~ 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-e
Confidence 999999998764 34589999999999999999999 789999999999999999999999999999987643221 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~l~~ 950 (985)
......++..|+|||.+.+..++.++|+ |++|+.++++++ +..+...... ...++.++.++.+++.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 239 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDV-WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMR 239 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 1122234668999999998999999999 999999999997 5544332111 1122335678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHHh
Q 001988 951 ECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+||..+|++||++.++++.|+.+
T Consensus 240 ~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 240 ACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999998864
No 106
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.1e-32 Score=311.86 Aligned_cols=238 Identities=21% Similarity=0.255 Sum_probs=194.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.|...+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999864 78899999997542 2234568899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC-
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE- 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 881 (985)
|+++|+|.+++...+ .+++.....++.|++.||+|| |+.||+||||||+||+++.++++||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~L---H~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESV---HKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999987654 578888899999999999999 789999999999999999999999999999864321000
Q ss_pred --------------------------------------------cceecccccccccccccccccCccchhhhccccccc
Q 001988 882 --------------------------------------------STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPV 917 (985)
Q Consensus 882 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~ 917 (985)
.......+||+.|+|||.+.+..++.++|+ |++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di-wSlG~ 236 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW-WSVGV 236 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccce-eehhh
Confidence 000123469999999999998889999999 99999
Q ss_pred chhhhcccccccCcchhhhh---------------HHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHHH
Q 001988 918 SLVEVVDKSLLSGEEKHFAA---------------KEQCLLSIFSLALE--CTMESPEKRIDAKDTITR 969 (985)
Q Consensus 918 ~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~l~~l~~~--cl~~~P~~RPt~~ev~~~ 969 (985)
+++++++|..++........ ....+.++.+++.+ |+..+|..||++.|+++.
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999877643321110 01235678888888 556667779999999864
No 107
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=318.99 Aligned_cols=250 Identities=24% Similarity=0.291 Sum_probs=205.1
Q ss_pred cCccCCceeeccCceeEEEEEEcCC-cEEEEEEeccCCcchHHHHHHHHHHHHhcC-CCCeeeEEee-eec------CCc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDG-VEIAIKVFHPQCASTLKSFEAECEVIKNIR-HRNLVKIISS-CSN------DDF 796 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~-~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-h~niv~l~~~-~~~------~~~ 796 (985)
-++.+.+.|.+|||+.||.|....+ .+||+|++-.........+++||++|++++ |+|||.|++. ... .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3556778899999999999997655 999999988777777888999999999996 9999999993 321 135
Q ss_pred eEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 797 KALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
++|.||||+||.|-|++... ...+++.++++|+.|+++|+++||+ ....|||||||.+|||++.+|..||||||.|+-
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 77999999999999999854 3359999999999999999999976 566799999999999999999999999999875
Q ss_pred ccCCCCcce-------eccccccccccccccc---ccCccchhhhcccccccchhhhcccccccCcch---------hhh
Q 001988 876 LSGEDESTM-------RTQTLATIGYMAPDEI---FVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---------HFA 936 (985)
Q Consensus 876 ~~~~~~~~~-------~~~~~gt~~y~aPE~~---~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~---------~~~ 936 (985)
.-...+... .-...-|+.|+|||++ .+...+.++|+ |++||++|-+.-+..++.... ..+
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDI-WALGclLYkLCy~t~PFe~sg~laIlng~Y~~P 274 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDI-WALGCLLYKLCYFTTPFEESGKLAILNGNYSFP 274 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHH-HHHHHHHHHHHHhCCCcCcCcceeEEeccccCC
Confidence 432221111 0112368999999965 47788999999 999999999887777665441 222
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
....+...+.+||+.||.++|.+||++-+|++.+.++....
T Consensus 275 ~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 275 PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 33467888999999999999999999999999999988653
No 108
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9.2e-33 Score=302.79 Aligned_cols=247 Identities=20% Similarity=0.305 Sum_probs=199.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDF 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~ 796 (985)
..++|++.+.||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999753 245799998865432 234467889999999999999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEE
Q 001988 797 KALVLEYMSNGSLEDCLHSSN---------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHL 867 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl 867 (985)
.++||||+++|+|.+++.... ...++....+++.|++.||+|| |+++|+||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999997531 2346778889999999999999 7899999999999999999999999
Q ss_pred ecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcch------------h
Q 001988 868 SDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEK------------H 934 (985)
Q Consensus 868 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~------------~ 934 (985)
+|||+++...............++..|+|||.+.++.++.++|+ |++|++++++++ +..+..... .
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv-wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM-WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 239 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 99999986543222222222345678999999999999999999 999999999987 443332111 0
Q ss_pred hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 935 FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 935 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
...++.+++.+.+++.+|++.+|++||++.++++.+++..
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1112345678999999999999999999999998887654
No 109
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.1e-32 Score=296.56 Aligned_cols=243 Identities=24% Similarity=0.324 Sum_probs=203.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|+.. +++.||||.++... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999864 78999999886432 223456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 802 EYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 802 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
||+++|+|.+++.. ....+++.....++.|++.||+|| |+++++||||||+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988853 234578899999999999999999 899999999999999999999999999999987643
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh---------------hhhHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH---------------FAAKEQCLL 943 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~---------------~~~~~~~~~ 943 (985)
.. .......+++.|+|||.+.+..++.++|+ |++|+.+++++++..+...... ....+..+.
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di-~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDI-WSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSE 235 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhH-HHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCH
Confidence 22 11223458889999999998889999999 9999999999988765432210 001234567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
.+.+++.+||..+|++||++.++++.++.++
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 7999999999999999999999999998764
No 110
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.7e-32 Score=300.05 Aligned_cols=244 Identities=24% Similarity=0.429 Sum_probs=200.5
Q ss_pred cCccCCceeeccCceeEEEEEE-----cCCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecC--Cce
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-----EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSND--DFK 797 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~ 797 (985)
..|+..+.||+|+||.||+|.. .++..||+|.++.... .....+.+|++++++++|||++++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999974 3578899999875532 2346789999999999999999999999775 567
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++++|.+++......+++.++..++.|++.||+|| |++|++||||||+||+++.++.+||+|||+++.+.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l---H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 899999999999999977655689999999999999999999 78999999999999999999999999999998765
Q ss_pred CCCCc-ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc------------------------
Q 001988 878 GEDES-TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE------------------------ 932 (985)
Q Consensus 878 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~------------------------ 932 (985)
..... .......++..|+|||.+.+..++.++|+ |++|+++++++++.......
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di-~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDV-WSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccc-hhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 33221 12223456778999999988889999999 99999999998754321100
Q ss_pred ---hhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 933 ---KHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 933 ---~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
...+.+..++.++.+++.+|++.+|++||++.++++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00111223567899999999999999999999999999875
No 111
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-32 Score=312.80 Aligned_cols=237 Identities=21% Similarity=0.277 Sum_probs=196.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999865 78999999997542 223456788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSI---HKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999998654 688999999999999999999 789999999999999999999999999999876532111
Q ss_pred cc------------------------------------eecccccccccccccccccCccchhhhcccccccchhhhccc
Q 001988 882 ST------------------------------------MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK 925 (985)
Q Consensus 882 ~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~ 925 (985)
.. .....+||+.|+|||++....++.++|+ |++|++++++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlG~il~el~~G 235 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW-WSLGVIMYEMLVG 235 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeee-ecchhHHHHhhcC
Confidence 00 0112469999999999999999999999 9999999999998
Q ss_pred ccccCcchhhhh---------------HHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 001988 926 SLLSGEEKHFAA---------------KEQCLLSIFSLALECTMESPEKRID---AKDTIT 968 (985)
Q Consensus 926 ~~~~~~~~~~~~---------------~~~~~~~l~~l~~~cl~~~P~~RPt---~~ev~~ 968 (985)
..++........ ....++++.+++.+|+. +|.+|++ +.|+++
T Consensus 236 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 876543321110 01235678899999996 9999998 888866
No 112
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.8e-33 Score=311.70 Aligned_cols=238 Identities=24% Similarity=0.312 Sum_probs=201.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|+++++.++||||+++++++.++++.++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999975 78999999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC-
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED- 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~- 880 (985)
||+++|+|.+++... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~L---H~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSV---HKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999876 4688999999999999999999 78999999999999999999999999999998764332
Q ss_pred --------------------------CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh
Q 001988 881 --------------------------ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH 934 (985)
Q Consensus 881 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~ 934 (985)
.........||+.|+|||.+.+..++.++|+ |++|++++++++|..+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDW-WSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceee-EecchhhhhhccCCCCCCCCCH
Confidence 0011234469999999999999999999999 9999999999999876544321
Q ss_pred hh---------------hHHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 001988 935 FA---------------AKEQCLLSIFSLALECTMESPEKRID-AKDTITR 969 (985)
Q Consensus 935 ~~---------------~~~~~~~~l~~l~~~cl~~~P~~RPt-~~ev~~~ 969 (985)
.. .....++++.+++.+|+. +|.+||+ +.|+++.
T Consensus 236 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11 011136788999999997 9999999 9999874
No 113
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-32 Score=321.70 Aligned_cols=243 Identities=22% Similarity=0.260 Sum_probs=202.1
Q ss_pred HHhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC----
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD---- 795 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~---- 795 (985)
...++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++..++|+|++++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3457899999999999999999985 479999999987553 234556789999999999999999988775432
Q ss_pred ----ceEEEEeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEe
Q 001988 796 ----FKALVLEYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLS 868 (985)
Q Consensus 796 ----~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~ 868 (985)
..++||||+++|+|.++++.. ...+++.....++.|++.||.|+ |+++|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l---H~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV---HSKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEeCCCCEEEE
Confidence 367999999999999998753 34688999999999999999999 88999999999999999999999999
Q ss_pred cccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------h
Q 001988 869 DFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------A 936 (985)
Q Consensus 869 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~ 936 (985)
|||+++.+............+||+.|+|||.+.+..++.++|+ |++|++++++++++.++...... +
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DV-wSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~ 264 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADM-FSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP 264 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 9999987654332333345679999999999999999999999 99999999999988765432211 1
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+..+++++.+++.+||+.+|.+||++.++++.
T Consensus 265 ~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 265 LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 123456789999999999999999999999763
No 114
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-32 Score=304.40 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=203.3
Q ss_pred hcCccCCceeeccCceeEEEEEEc--------CCcEEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecC
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE--------DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSND 794 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~ 794 (985)
.++|.+.+.||+|+||.||+|+.. ++..||+|.++... ......+..|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 367899999999999999999752 23569999998653 23456788899999999 799999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL 859 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill 859 (985)
+..++||||+++|+|.+++.... ..+++.++.+++.|++.||+|| |+.|++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHHheEE
Confidence 99999999999999999997542 2478899999999999999999 78999999999999999
Q ss_pred cCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh----
Q 001988 860 DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH---- 934 (985)
Q Consensus 860 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~---- 934 (985)
++++.+||+|||.++...............+++.|+|||.+.+..++.++|+ |++|++++++++ +..+....+.
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV-WSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHH-HHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 9999999999999886643221111222234578999999998889999999 999999999987 5444332211
Q ss_pred --------hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 935 --------FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 935 --------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
...+..++.++.+++.+|+..+|++||++.++++.|.++.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 253 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1122345678999999999999999999999999999987653
No 115
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-32 Score=301.61 Aligned_cols=249 Identities=24% Similarity=0.373 Sum_probs=203.3
Q ss_pred HhcCccCCceeeccCceeEEEEEEc--------CCcEEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeec
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE--------DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSN 793 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~ 793 (985)
..++|...+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3467888899999999999999741 34579999987543 23456789999999999 89999999999999
Q ss_pred CCceEEEEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 001988 794 DDFKALVLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVL 858 (985)
Q Consensus 794 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nil 858 (985)
.+..++||||+++|+|.+++.... ..+++.++..++.|+++||+|| |++|++||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL---ASQKCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH---HHCCeeecccccceEE
Confidence 999999999999999999987531 2467888999999999999999 7899999999999999
Q ss_pred EcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh--
Q 001988 859 LDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-- 935 (985)
Q Consensus 859 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-- 935 (985)
+++++.+||+|||+++.+.............+++.|+|||++.+..++.++|+ |++|+.++++++ +..+....+..
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV-WSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhH-HHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 99999999999999987653332222233346778999999998889999999 999999999987 44332211111
Q ss_pred ----------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 936 ----------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 936 ----------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
..+..++.++.+++.+||+.+|.+||++.|+++.|.++..-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 249 FKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 11223567899999999999999999999999999987653
No 116
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=304.23 Aligned_cols=237 Identities=24% Similarity=0.287 Sum_probs=205.7
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~ 798 (985)
..+.|...+.||+|.||.||+++.+ +|+.+|+|.+.+.... +...+.+|+.+|+++. |||||++++++++.+..+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456888899999999999999976 5999999999876443 3468899999999998 999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC----CCcEEEecccCce
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE----DMVAHLSDFGMAK 874 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~----~~~~kl~DfGla~ 874 (985)
+|||++.||.|++.+... .+++.....++.|++++++|| |+.||+|||+||+|+|+.. ++.+|++|||++.
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~l---H~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYL---HSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHH---HhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 999999999999999876 389999999999999999999 8899999999999999953 3589999999999
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch---------------hhhhHH
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---------------HFAAKE 939 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~---------------~~~~~~ 939 (985)
.... .......+||+.|+|||++....++...|+ |+.|+..+.++.|..++.... ..+..+
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~Di-WS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~ 263 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDV-WSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWD 263 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccch-hHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcc
Confidence 8754 334567889999999999999999999999 999999999988776544332 111233
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
...+...++++.|+..||.+|+++.++++.
T Consensus 264 ~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 264 DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 457889999999999999999999999984
No 117
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-32 Score=302.87 Aligned_cols=252 Identities=24% Similarity=0.377 Sum_probs=203.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc--------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecC
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE--------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSND 794 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~ 794 (985)
.++|...+.||+|+||.||+|+.. ....||+|.++.... .....+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 467888999999999999999742 345699999875432 3356788999999999 699999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL 859 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill 859 (985)
+..++||||+++|+|.+++.... ..+++.++.+++.|++.||+|| |++|++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL---ESRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeeccccceeEEE
Confidence 99999999999999999996532 3478899999999999999999 78999999999999999
Q ss_pred cCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh---
Q 001988 860 DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF--- 935 (985)
Q Consensus 860 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~--- 935 (985)
++++.+||+|||.++...............++..|+|||.+..+.++.++|+ |++|+.++++++ +..+....+..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV-WSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchh-hHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999987643222221222234567999999999999999999 999999999987 54433221110
Q ss_pred ---------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhccc
Q 001988 936 ---------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLSKR 980 (985)
Q Consensus 936 ---------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~~~ 980 (985)
..+..++.++.+++.+|+..+|++||++.|+++.|.++......+
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 300 (314)
T cd05099 247 KLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEE 300 (314)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCC
Confidence 112234568999999999999999999999999999988755443
No 118
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.7e-32 Score=304.41 Aligned_cols=227 Identities=23% Similarity=0.236 Sum_probs=188.1
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999865 67889999997542 22334556677777654 899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++.....++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFL---HKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 99999987654 688999999999999999999 78999999999999999999999999999998653222 2233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||.+.+..++.++|+ |++|++++++++|..+........ .+..++.++.+++.+||..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Dv-wslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDW-WSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFER 233 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccc-hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccC
Confidence 4579999999999999899999999 999999999999987654332111 1122456788999999999
Q ss_pred CCCCCCCHHH
Q 001988 956 SPEKRIDAKD 965 (985)
Q Consensus 956 ~P~~RPt~~e 965 (985)
+|.+||++.+
T Consensus 234 ~P~~R~~~~~ 243 (316)
T cd05592 234 DPTKRLGVDG 243 (316)
T ss_pred CHHHcCCChH
Confidence 9999998753
No 119
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.3e-32 Score=305.89 Aligned_cols=227 Identities=24% Similarity=0.282 Sum_probs=190.8
Q ss_pred ceeeccCceeEEEEEE----cCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 732 NIIGIGGFGSVYRARL----EDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~----~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 3688999999975422 233457789999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+|+|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||++++++.+||+|||+++...... ...
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKA 155 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--Cce
Confidence 999999987653 689999999999999999999 78999999999999999999999999999988653321 223
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccC
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTM 954 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~ 954 (985)
....||+.|+|||.+.+..++.++|+ |++|+.++++++|..+........ .+...+.++.+++++||.
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~Di-wslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~ 234 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADW-WSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFK 234 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccce-eccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence 34579999999999988889999999 999999999999887654332111 122346778999999999
Q ss_pred CCCCCCCCHHH
Q 001988 955 ESPEKRIDAKD 965 (985)
Q Consensus 955 ~~P~~RPt~~e 965 (985)
.||.+||++.+
T Consensus 235 ~~P~~R~~a~~ 245 (318)
T cd05582 235 RNPANRLGAGP 245 (318)
T ss_pred cCHhHcCCCCC
Confidence 99999999655
No 120
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.2e-32 Score=296.35 Aligned_cols=244 Identities=23% Similarity=0.406 Sum_probs=201.6
Q ss_pred cCccCCceeeccCceeEEEEEEc----CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
++|+..+.||+|+||.||+|+.. ++..||+|.++.... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56788899999999999999863 234799999875432 2346789999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++++|.+++......+++.+...++.|++.|++|| |+.+++||||||+||+++.++.+|++|||++..+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 999999999999987766789999999999999999999 78999999999999999999999999999998765332
Q ss_pred Ccce-ecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHH
Q 001988 881 ESTM-RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIF 946 (985)
Q Consensus 881 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~ 946 (985)
.... .....++..|+|||.+....++.+.|+ |++|+.+++++. +..+...... .+.+..++..+.
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv-~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDV-WSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALH 239 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhh-HHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHH
Confidence 2111 112234568999999998899999999 999999999775 6654432211 111223567889
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 947 SLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+++.+|++.+|.+||++.++++.|.++
T Consensus 240 ~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 240 QLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999999875
No 121
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-32 Score=304.85 Aligned_cols=231 Identities=23% Similarity=0.225 Sum_probs=192.1
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|++.+.. ......+..|.++++.+ +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999865 67899999987542 22345677899998876 799999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFL---HRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTT 154 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC--cccc
Confidence 99999987654 688899999999999999999 78999999999999999999999999999987643222 2233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhhH-----------HHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAK-----------EQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~-----------~~~~~~l~~l~~~cl~~ 955 (985)
...||+.|+|||.+.+..++.++|+ |++|+.++++++|..+.......... ..++.++.+++.+|+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Dv-wslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDW-WALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTK 233 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccce-echhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcc
Confidence 4569999999999998899999999 99999999999998776543222111 12357789999999999
Q ss_pred CCCCCC-------CHHHHHHH
Q 001988 956 SPEKRI-------DAKDTITR 969 (985)
Q Consensus 956 ~P~~RP-------t~~ev~~~ 969 (985)
+|++|| ++.++++.
T Consensus 234 dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcC
Confidence 999999 67777643
No 122
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-32 Score=298.71 Aligned_cols=242 Identities=25% Similarity=0.415 Sum_probs=201.1
Q ss_pred cCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
++|...++||+|+||.||+|... ++..||+|.+..........+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777899999999999999642 466799999876655566789999999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcE
Q 001988 800 VLEYMSNGSLEDCLHSSN--------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 865 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~ 865 (985)
||||+++|+|.+++.... ..+++..++.++.|++.|++|| |++|++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH---HHCCeecccccHhhEEEcCCCCE
Confidence 999999999999987643 2478899999999999999999 78999999999999999999999
Q ss_pred EEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh----------
Q 001988 866 HLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH---------- 934 (985)
Q Consensus 866 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~---------- 934 (985)
||+|||+++.+.............+++.|+|||.+.+..++.++|+ |++|+.++++++ +..+......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 240 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI-WSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG 240 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhH-HHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence 9999999986543222222223345788999999999999999999 999999999987 5554322111
Q ss_pred --hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 935 --FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 935 --~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
...+..++..+.+++.+||..+|.+||++.|+.+.|+
T Consensus 241 ~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1112345688999999999999999999999999886
No 123
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-34 Score=305.15 Aligned_cols=232 Identities=25% Similarity=0.330 Sum_probs=196.7
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
|...+.||+|+||.||-|+.. +...||||++.....+ ....+.+|++.|++++|||+|.+-|+|......|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 555677999999999999854 7788999999755333 345788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
| -|+-.|.+.-..+++.+.++..|+.+.++||+|| |+++.||||||+-|||+++.|.|||+|||.|....+
T Consensus 108 C-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYL---HS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 108 C-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred H-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHH---HHhhHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 9 5688888887777888999999999999999999 899999999999999999999999999999987532
Q ss_pred eecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCc--------------chhhhhHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGE--------------EKHFAAKEQCLLSIF 946 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~--------------~~~~~~~~~~~~~l~ 946 (985)
...++|||+|||||++. .|.|+.+.|| |++|+...|+...+.+... .|.. ...++.+.+.
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDv-WSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL-qs~eWS~~F~ 255 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDV-WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL-QSNEWSDYFR 255 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccce-eeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC-CCchhHHHHH
Confidence 23568999999999875 5889999999 9999998888876543221 1111 2345788899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 947 SLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
+++..|++.-|.+|||..++++.--
T Consensus 256 ~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 256 NFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred HHHHHHHhhCcccCCcHHHHhhcch
Confidence 9999999999999999999876543
No 124
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.3e-32 Score=298.78 Aligned_cols=245 Identities=26% Similarity=0.382 Sum_probs=201.0
Q ss_pred CccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
+|+..+.||+|+||.||+|... ....||+|.+..... .....+.+|+.++++++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999753 235689998875532 234678899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 001988 800 VLEYMSNGSLEDCLHSS-----------------------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSN 856 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~-----------------------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~N 856 (985)
||||+++|+|.+++... ...+++.++..++.|++.|++|| |+++|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH---HHCCeehhhhhhhe
Confidence 99999999999987642 12478889999999999999999 78999999999999
Q ss_pred EEEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh
Q 001988 857 VLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF 935 (985)
Q Consensus 857 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~ 935 (985)
|++++++.+||+|||+++...............++..|+|||.+.+..++.++|+ |++|++++++++ +..+.......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDV-WSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHH-HHHHHHHHHHHhcCCCCCCCCCHH
Confidence 9999999999999999987543332222223346778999999988889999999 999999999997 66544322111
Q ss_pred ------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 936 ------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 936 ------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
+.+..++.++.+++.+|++.+|++||++.++++.|+++-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 RLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1123356789999999999999999999999999998764
No 125
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.1e-32 Score=299.74 Aligned_cols=243 Identities=23% Similarity=0.377 Sum_probs=196.0
Q ss_pred cCccCCceeeccCceeEEEEEEcC---------------CcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLED---------------GVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIIS 789 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~---------------~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~ 789 (985)
++|+..+.||+|+||.||+|+... ...||+|.++..... ....+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578888999999999999987542 234899998765332 3457899999999999999999999
Q ss_pred eeecCCceEEEEeccCCCChHHHhhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 001988 790 SCSNDDFKALVLEYMSNGSLEDCLHSSN-----------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVL 858 (985)
Q Consensus 790 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nil 858 (985)
++...+..++||||+++++|.+++.... ..+++..+++++.|++.|++|| |+.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH---HhcCeeccccChhhEE
Confidence 9999999999999999999999986532 2367889999999999999999 7899999999999999
Q ss_pred EcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhccc--ccccCcchhh-
Q 001988 859 LDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK--SLLSGEEKHF- 935 (985)
Q Consensus 859 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~--~~~~~~~~~~- 935 (985)
+++++.+||+|||++................++..|+|||.+..+.++.++|+ |++|+.++++++. ..+.......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDV-WAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhH-HHHHHHHHHHHHcCCCCCCcccChHH
Confidence 99999999999999986543322222223345778999999999999999999 9999999999863 2222111000
Q ss_pred ------------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 936 ------------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 936 ------------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
..+..+++.+.+++.+||..+|++||++.+|++.|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 0011245779999999999999999999999998863
No 126
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=9e-33 Score=311.76 Aligned_cols=233 Identities=25% Similarity=0.353 Sum_probs=190.2
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34566788999999999999865 7899999998654322 346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++|+|.+.. ..++.....++.||+.||+|| |+.||+||||||+||++++++.+||+|||+++.+.....
T Consensus 154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 223 (353)
T PLN00034 154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYL---HRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-- 223 (353)
T ss_pred CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--
Confidence 9999987532 345677888999999999999 789999999999999999999999999999987643221
Q ss_pred eeccccccccccccccccc-----CccchhhhcccccccchhhhcccccccCcchhh---------------hhHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFV-----GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQCLL 943 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~ 943 (985)
......||..|+|||.+.. ...+.++|+ |++|++++++++++.++...... ..+..++.
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dv-wslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDI-WSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASR 302 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhH-HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCH
Confidence 1233569999999998743 233468899 99999999999998766422110 01223467
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++.+++.+||..+|++||++.|+++.
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999874
No 127
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.7e-32 Score=306.37 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=199.0
Q ss_pred hcCccCCceeeccCceeEEEEEE------cCCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecC-C
Q 001988 725 TDNFAENNIIGIGGFGSVYRARL------EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSND-D 795 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~-~ 795 (985)
.++|+..+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46789999999999999999973 3578899999976532 2345688999999999 689999999988654 4
Q ss_pred ceEEEEeccCCCChHHHhhcCC----------------------------------------------------------
Q 001988 796 FKALVLEYMSNGSLEDCLHSSN---------------------------------------------------------- 817 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 817 (985)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999986431
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccc
Q 001988 818 --------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889 (985)
Q Consensus 818 --------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 889 (985)
..+++....+++.|+++||+|| |+++|+||||||+||++++++.+||+|||+++.+.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 2357788899999999999999 78999999999999999999999999999998754332222222234
Q ss_pred cccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-------------hhHHHHHHHHHHHHHHccCC
Q 001988 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------------AAKEQCLLSIFSLALECTME 955 (985)
Q Consensus 890 gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------------~~~~~~~~~l~~l~~~cl~~ 955 (985)
+++.|+|||.+....++.++|+ |++|+.++++++ +..+....... ..+...++++.+++.+||..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~ 321 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDV-WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG 321 (343)
T ss_pred CCcceECcHHhcCCCCCchhhH-HHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccC
Confidence 5678999999999999999999 999999999985 55443221100 01112346789999999999
Q ss_pred CCCCCCCHHHHHHHHHHhHhh
Q 001988 956 SPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 956 ~P~~RPt~~ev~~~L~~i~~~ 976 (985)
+|++||++.|+++.|+.+.++
T Consensus 322 ~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 322 EPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999988764
No 128
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-32 Score=311.03 Aligned_cols=231 Identities=18% Similarity=0.194 Sum_probs=191.3
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..+|+..+.||+|+||.||+|... +++.||+|.... ..+.+|++++++++||||+++++++...+..++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999864 788999997532 3467899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+. ++|.+++.... .+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+...... ..
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~yl---H~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYL---HENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-AN 238 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cc
Confidence 95 68988887653 678999999999999999999 78999999999999999999999999999997543221 11
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhccccccc-Ccc----------------------h-hh----
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLS-GEE----------------------K-HF---- 935 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~-~~~----------------------~-~~---- 935 (985)
.....+||+.|+|||++.+..++.++|+ |++|+++++++++..+. ... + ..
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDI-WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHH-HHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 2234579999999999999999999999 99999999999876321 100 0 00
Q ss_pred -------------------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 -------------------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 -------------------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
......+.++.+++.+|++.||.+|||+.|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 001123567889999999999999999999985
No 129
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.7e-32 Score=308.23 Aligned_cols=237 Identities=21% Similarity=0.277 Sum_probs=191.5
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC-----CceE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND-----DFKA 798 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~-----~~~~ 798 (985)
+|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999865 78999999987432 22345688999999999999999999988543 2479
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+||||++ ++|.+++.... .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYI---HTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68999887654 588999999999999999999 789999999999999999999999999999986532
Q ss_pred CCC-cceeccccccccccccccccc--CccchhhhcccccccchhhhcccccccCcchhhhh------------------
Q 001988 879 EDE-STMRTQTLATIGYMAPDEIFV--GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------ 937 (985)
Q Consensus 879 ~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------ 937 (985)
... ........||+.|+|||.+.+ ..++.++|+ |++|++++++++|+.+.........
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~Dv-wSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDI-WSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHH-HHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 222 112234579999999998865 678899999 9999999999998865432210000
Q ss_pred ------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 ------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 ------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
....+..+.+++.+|+..+|++||++.|+++.
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00123557899999999999999999999864
No 130
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.7e-32 Score=293.57 Aligned_cols=242 Identities=26% Similarity=0.418 Sum_probs=201.2
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.++|...+.||+|+||.||+|...++..||+|.++.... ..+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 356888999999999999999987777899999875432 34678999999999999999999998754 5578999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++|+|.+++... ...+++..+..++.|+++||+|+ |+.+++||||||+||++++++.+||+|||.++.+..... .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~ 158 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 158 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence 999999999764 34578999999999999999999 789999999999999999999999999999987643322 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~l~~ 950 (985)
......++..|+|||....+.++.++|+ |++|+.++++++ +..+...... ......++..+.+++.
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv-wslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 237 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhH-HHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHH
Confidence 2223346778999999988999999999 999999999998 6654432211 1112346788999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHHh
Q 001988 951 ECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+|++.+|++||++.++.+.|++.
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999998764
No 131
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.9e-32 Score=298.44 Aligned_cols=243 Identities=24% Similarity=0.399 Sum_probs=199.3
Q ss_pred hcCccCCceeeccCceeEEEEEEcC-----------------CcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeee
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLED-----------------GVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVK 786 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~ 786 (985)
.++|...+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999987542 34689999876533 34567899999999999999999
Q ss_pred EEeeeecCCceEEEEeccCCCChHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 001988 787 IISSCSNDDFKALVLEYMSNGSLEDCLHSSN----------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSN 856 (985)
Q Consensus 787 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~N 856 (985)
+++++..++..++||||+++++|.+++.... ..+++..++.++.|++.||+|| |+.+|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L---H~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL---ESLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH---HHcCccccccchhc
Confidence 9999999999999999999999999987643 2578999999999999999999 78999999999999
Q ss_pred EEEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc--cccccCcchh
Q 001988 857 VLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD--KSLLSGEEKH 934 (985)
Q Consensus 857 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~--~~~~~~~~~~ 934 (985)
|+++.++.++|+|||+++...............+++.|+|||.+..+.++.++|+ |++|+.++++++ +..+......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDV-WAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchh-hhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9999999999999999987643332222334456789999999988899999999 999999999886 3322221111
Q ss_pred h-------------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 935 F-------------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 935 ~-------------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
. ..+..+++++.+++.+|++.+|.+||++.|+++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 0 011123578999999999999999999999998875
No 132
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.2e-32 Score=310.16 Aligned_cols=238 Identities=22% Similarity=0.265 Sum_probs=194.1
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|+.. +++.||||++.+.. ....+.+.+|++++++++||||+++++++.+.++.|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999864 78999999986532 223456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.....++.|++.||+|| |+.||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~L---H~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAV---HKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999997653 678888999999999999999 899999999999999999999999999999964321100
Q ss_pred c---------------------------------------------ceecccccccccccccccccCccchhhhcccccc
Q 001988 882 S---------------------------------------------TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLP 916 (985)
Q Consensus 882 ~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g 916 (985)
. ......+||+.|+|||.+.+..++.++|+ |++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlG 235 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDW-WSLG 235 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceee-Eecc
Confidence 0 00012469999999999999999999999 9999
Q ss_pred cchhhhcccccccCcchhhhh---------------HHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 001988 917 VSLVEVVDKSLLSGEEKHFAA---------------KEQCLLSIFSLALECTMESPEKR---IDAKDTITR 969 (985)
Q Consensus 917 ~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~l~~l~~~cl~~~P~~R---Pt~~ev~~~ 969 (985)
++++++++|..++........ ......++.+++.+|+. +|.+| +++.|++..
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999876543221110 01234678899999997 66664 599888764
No 133
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-32 Score=305.51 Aligned_cols=236 Identities=24% Similarity=0.259 Sum_probs=193.7
Q ss_pred CccCCceeeccCceeEEEEEE----cCCcEEEEEEeccCC----cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCce
Q 001988 727 NFAENNIIGIGGFGSVYRARL----EDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~ 797 (985)
+|+..+.||+|+||.||+|+. .+++.||+|++.+.. ....+.+..|+.+++++ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999975 368899999987531 22345678899999999 589999999999999999
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++|+|.+++.... .+++.....++.|++.||+|| |++||+||||||+|||++.++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHL---HKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999987653 588999999999999999999 78999999999999999999999999999998754
Q ss_pred CCCCcceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhh---------------hhHHHH
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQC 941 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~ 941 (985)
.... ......+||+.|+|||.+.+. .++.++|+ |++|++++++++|..+....... ..+...
T Consensus 157 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di-wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd05614 157 SEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDW-WSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFI 234 (332)
T ss_pred ccCC-CccccccCCccccCHHHhcCCCCCCCcccc-ccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence 3222 222345799999999998765 47788999 99999999999998765421110 011124
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001988 942 LLSIFSLALECTMESPEKRI-----DAKDTIT 968 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RP-----t~~ev~~ 968 (985)
+..+.+++.+|+..||++|| ++.++++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 56788999999999999999 6667764
No 134
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2e-32 Score=304.41 Aligned_cols=225 Identities=24% Similarity=0.245 Sum_probs=189.0
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.+ +++.||+|++.+.. ......+..|.++++.. +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 68899999987542 23345677888888876 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++..+..++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~l---H~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTS 154 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cccc
Confidence 99999887654 688999999999999999999 78999999999999999999999999999987642222 1223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
...||+.|+|||.+.+..++.++|+ |++|++++++++|..++....... .+...+.++.+++.+|++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~ 233 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDW-WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTK 233 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccch-hhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccc
Confidence 4569999999999998899999999 999999999999987765432211 1122467789999999999
Q ss_pred CCCCCCCH
Q 001988 956 SPEKRIDA 963 (985)
Q Consensus 956 ~P~~RPt~ 963 (985)
||.+||++
T Consensus 234 dP~~R~~~ 241 (320)
T cd05590 234 NPTMRLGS 241 (320)
T ss_pred CHHHCCCC
Confidence 99999998
No 135
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.9e-32 Score=295.81 Aligned_cols=244 Identities=22% Similarity=0.398 Sum_probs=200.0
Q ss_pred cCccCCceeeccCceeEEEEEEc-CC---cEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DG---VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
.+|+..+.||+|+||.||+|... ++ ..||+|.+.... .....++..|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35778899999999999999865 33 369999987552 23456789999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++|+|.+++......+++.+++.++.|++.|++|| |++|++||||||+||+++.++.+|++|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~l---H~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999999999987666789999999999999999999 78999999999999999999999999999987664322
Q ss_pred Ccceec-ccc--cccccccccccccCccchhhhcccccccchhhhcc-cccccCcch------------hhhhHHHHHHH
Q 001988 881 ESTMRT-QTL--ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEK------------HFAAKEQCLLS 944 (985)
Q Consensus 881 ~~~~~~-~~~--gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~------------~~~~~~~~~~~ 944 (985)
...... ... .+..|+|||.+..+.++.++|+ |++|+.++++++ +..+..... ..+.+.+++..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv-wslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 239 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDV-WSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTA 239 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhh-hhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHH
Confidence 211111 111 2457999999999999999999 999999999775 554432211 11123346778
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 945 IFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+.+++.+||..+|.+||++.+++..|+++
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 240 LHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998764
No 136
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-32 Score=299.50 Aligned_cols=242 Identities=24% Similarity=0.375 Sum_probs=197.8
Q ss_pred CccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
+|...+.||+|+||.||+|... +++.||+|+++..... ....+.+|+.++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4666788999999999999853 3578999999755332 24568899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc
Q 001988 800 VLEYMSNGSLEDCLHSS---------------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 864 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~ 864 (985)
++||+++++|.+++... ...+++..+.+++.|++.||+|+ |++||+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l---H~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHcCccccccchhheEecCCCc
Confidence 99999999999998532 12478888999999999999999 7899999999999999999999
Q ss_pred EEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh---------
Q 001988 865 AHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH--------- 934 (985)
Q Consensus 865 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~--------- 934 (985)
+||+|||+++...............+++.|+|||.+..+.++.++|+ |++|+.++++++ +..+......
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDI-WSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999887643332222233446789999999998999999999 999999999987 4433222111
Q ss_pred ---hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 935 ---FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 935 ---~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
...+.+++..+.+++.+||+.+|++||++.+++++|+.
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 242 RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 01123467789999999999999999999999999863
No 137
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.8e-32 Score=295.94 Aligned_cols=249 Identities=21% Similarity=0.316 Sum_probs=205.2
Q ss_pred HhcCccCCceeeccCceeEEEEEEcC-----CcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeec-CCc
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLED-----GVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSN-DDF 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~~-----~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~-~~~ 796 (985)
..++|...+.||+|+||.||+|...+ +..||+|++..... .....+.+|+.++++++||||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35678889999999999999998765 68899998875432 335668899999999999999999998866 567
Q ss_pred eEEEEeccCCCChHHHhhcCC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 797 KALVLEYMSNGSLEDCLHSSN-------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
.++++||+++|+|.+++.... ..+++.++..++.|++.||+|| |+.+++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL---HKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCHhhEEEcCCCcEEECC
Confidence 899999999999999987542 4588999999999999999999 789999999999999999999999999
Q ss_pred ccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------h
Q 001988 870 FGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------A 936 (985)
Q Consensus 870 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~ 936 (985)
||+++.+.............++..|+|||.+....++.++|+ |++|+.++++++ ++.+....... .
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 239 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDV-WSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA 239 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhH-HHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC
Confidence 999987643332222223346778999999988889999999 999999999997 66654322111 1
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
....+++++.+++.+||+.+|++||++.++++.|..+.+.
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 1223567899999999999999999999999999998764
No 138
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4e-32 Score=307.58 Aligned_cols=239 Identities=21% Similarity=0.233 Sum_probs=193.4
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||+||+|+.. +++.||+|++++.. ......+++|++++.+++||+|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47888999999999999999865 68899999997542 123356788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~l---H~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSI---HQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999999998654 688999999999999999999 899999999999999999999999999999876532110
Q ss_pred c---------------------------------ceecccccccccccccccccCccchhhhcccccccchhhhcccccc
Q 001988 882 S---------------------------------TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLL 928 (985)
Q Consensus 882 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~ 928 (985)
. ......+||+.|+|||.+.+..++.++|+ |++|++++++++|..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Dv-wSlGvil~ell~G~~P 235 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDW-WSLGVIMYEMLIGYPP 235 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhh-hhhHHHHHHHHhCCCC
Confidence 0 00123579999999999999999999999 9999999999999877
Q ss_pred cCcchhhhh-------------H--HHHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 001988 929 SGEEKHFAA-------------K--EQCLLSIFSLALECTM--ESPEKRIDAKDTITR 969 (985)
Q Consensus 929 ~~~~~~~~~-------------~--~~~~~~l~~l~~~cl~--~~P~~RPt~~ev~~~ 969 (985)
+........ + ....++..+++.+++. .++..||++.|+++.
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 643221110 0 0124566777776433 234467899999875
No 139
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.8e-32 Score=298.92 Aligned_cols=246 Identities=23% Similarity=0.350 Sum_probs=201.9
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSNDD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~ 795 (985)
..++|...+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3457889999999999999999741 355799999875532 2345788999999999 7999999999999999
Q ss_pred ceEEEEeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 796 FKALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
..++||||+++|+|.++++... ..+++.++..++.|++.|++|| |+.+|+||||||+||+++.++.+|++|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 9999999999999999997643 3489999999999999999999 78999999999999999999999999999998
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-------------hhHHH
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------------AAKEQ 940 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------------~~~~~ 940 (985)
.+.............++..|+|||.+..+.++.++|+ |++|+.++++++ +..+....... ..+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV-WSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEH 268 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHH-HHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCC
Confidence 7643322222223346788999999999999999999 999999999987 65543221110 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
.++++.+++.+|+.++|++||++.|+++.|+++
T Consensus 269 ~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 269 APAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 457799999999999999999999999999874
No 140
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.7e-32 Score=304.14 Aligned_cols=233 Identities=23% Similarity=0.271 Sum_probs=191.5
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHH---hcCCCCeeeEEeeeecCCceEEE
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIK---NIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~---~l~h~niv~l~~~~~~~~~~~lv 800 (985)
|+..+.||+|+||.||+|... +++.||||++++.. ....+.+.+|++++. +++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999865 78999999997542 223455667776654 56799999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++|+|..++... .+++.....++.|++.||+|| |+.||+||||||+||++++++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~l---H~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYL---HENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 9999999999888653 589999999999999999999 78999999999999999999999999999987543221
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLA 949 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~ 949 (985)
......+|++.|+|||.+.+..++.++|+ |++|+.++++++|..+........ .+...+..+.+++
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 232 (324)
T cd05589 156 --DRTSTFCGTPEFLAPEVLTETSYTRAVDW-WGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIM 232 (324)
T ss_pred --CcccccccCccccCHhHhcCCCCCcccch-hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 22334579999999999999999999999 999999999999987765432111 1123467789999
Q ss_pred HHccCCCCCCCCC-----HHHHHH
Q 001988 950 LECTMESPEKRID-----AKDTIT 968 (985)
Q Consensus 950 ~~cl~~~P~~RPt-----~~ev~~ 968 (985)
.+|+..||.+||+ +.++++
T Consensus 233 ~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 233 RRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHhhcCHhHcCCCCCCCHHHHhh
Confidence 9999999999994 555554
No 141
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.3e-32 Score=289.17 Aligned_cols=235 Identities=23% Similarity=0.351 Sum_probs=195.4
Q ss_pred ceeeccCceeEEEEEEcCCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChH
Q 001988 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLE 810 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 810 (985)
++||+|+||.||+|..++++.||+|.++..... ....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888999999998765433 2346889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccccc
Q 001988 811 DCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890 (985)
Q Consensus 811 ~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~g 890 (985)
+++......+++..+..++.|++.||.|+ |++|++||||||+||++++++.+||+|||++........ .......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQI 156 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCC
Confidence 99987665689999999999999999999 789999999999999999999999999999876432211 11112234
Q ss_pred ccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHHHccCCCC
Q 001988 891 TIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLALECTMESP 957 (985)
Q Consensus 891 t~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~~cl~~~P 957 (985)
+..|+|||++..+.++.++|+ |++|+.++++++ +..+....... ..+..++..+.+++.+|+..+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di-~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 235 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDV-WSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKP 235 (250)
T ss_pred cccccCHHHhccCCCCchhHH-HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence 677999999998999999999 999999999987 55443221110 1122356789999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 001988 958 EKRIDAKDTITRLL 971 (985)
Q Consensus 958 ~~RPt~~ev~~~L~ 971 (985)
++||++.|+++.|.
T Consensus 236 ~~Rp~~~~l~~~l~ 249 (250)
T cd05085 236 ENRPKFSELQKELA 249 (250)
T ss_pred ccCCCHHHHHHHhc
Confidence 99999999999874
No 142
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8e-32 Score=293.99 Aligned_cols=248 Identities=23% Similarity=0.365 Sum_probs=204.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCc----EEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGV----EIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
++|+..+.||+|+||.||+|..+ +|. .||+|....... .....+.+|+.++++++||||+++++++.. +..++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999864 333 589998876543 234678899999999999999999999987 77899
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++|+|.+++......+++.....++.|++.|++|| |+.+++||||||+||++++++.+||+|||.++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYL---EEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 9999999999999988766789999999999999999999 7899999999999999999999999999999876533
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIF 946 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~ 946 (985)
..........++..|+|||.+....++.++|+ |++|+.++++++ +..+....... +.+..++..+.
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDV-WSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVY 241 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhH-HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 22222222234678999999988899999999 999999999997 66654432211 11222456788
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 947 SLALECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
+++.+||..+|.+||++.++++.+.++.++..
T Consensus 242 ~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 242 MVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred HHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999876543
No 143
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.4e-32 Score=297.80 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=200.9
Q ss_pred hcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~ 797 (985)
.++|...+.||+|+||.||+|... ++..||+|.+..... .....+.+|+.+++.++||||+++++++...+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999864 246799999875532 3345788999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEe
Q 001988 798 ALVLEYMSNGSLEDCLHSSN---------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLS 868 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~ 868 (985)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|| |+.+++||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL---AAKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999986531 2367889999999999999999 78999999999999999999999999
Q ss_pred cccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcch------------hh
Q 001988 869 DFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEK------------HF 935 (985)
Q Consensus 869 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~------------~~ 935 (985)
|||+++.+.............++..|+|||.+..+.++.++|+ |++|++++++++ +..+..... ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 240 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDV-WSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL 240 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccch-HHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCC
Confidence 9999987643332222233456789999999998899999999 999999999997 555432211 11
Q ss_pred hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 936 AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 936 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
..+..++.++.+++.+||..+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 123335788999999999999999999999999875
No 144
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.98 E-value=1.9e-32 Score=305.71 Aligned_cols=225 Identities=23% Similarity=0.248 Sum_probs=187.3
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|++++.. ......+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 68899999997642 22345678899988877 799999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++.... .+++..+..++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--Cccc
Confidence 99999887653 688999999999999999999 78999999999999999999999999999987542221 1223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcc-----hh---------------hhhHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE-----KH---------------FAAKEQCLLSIF 946 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~-----~~---------------~~~~~~~~~~l~ 946 (985)
...||+.|+|||.+.+..++.++|+ |++|++++++++|..+.... +. ...+...+.++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 233 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDW-WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 233 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccce-ecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 4579999999999999999999999 99999999999998765311 00 001223456788
Q ss_pred HHHHHccCCCCCCCCCH
Q 001988 947 SLALECTMESPEKRIDA 963 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~ 963 (985)
+++.+|+..||++||++
T Consensus 234 ~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 234 SVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHhcCCHHHcCCC
Confidence 99999999999999984
No 145
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=5.9e-32 Score=291.72 Aligned_cols=241 Identities=26% Similarity=0.448 Sum_probs=200.3
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.++|++.+.||+|+||.||+|..+++..||+|.++.... ..+.+.+|+.++++++|++++++++++.. +..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence 357888899999999999999988888999999876533 34678999999999999999999998854 5678999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++... ...+++.+++.++.|++.|++|| |+.+++||||||+||++++++.+||+|||++..+......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI---ERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-
Confidence 999999999764 34589999999999999999999 7889999999999999999999999999999876432211
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
......++..|+|||......++.++|+ |++|+.++++++ +..+....... +.+...+..+.+++.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDV-WSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELML 237 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhh-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 1222335678999999988899999999 999999999998 66544322111 112335678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
+|+.++|++||++.++.+.|++
T Consensus 238 ~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 238 QCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999998875
No 146
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.98 E-value=7e-32 Score=293.42 Aligned_cols=242 Identities=26% Similarity=0.400 Sum_probs=197.1
Q ss_pred ccCCceeeccCceeEEEEEEc-C---CcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc-----
Q 001988 728 FAENNIIGIGGFGSVYRARLE-D---GVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDF----- 796 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~---~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~----- 796 (985)
|...+.||+|+||.||+|... + +..||+|+++.... .....+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456788999999999999864 2 36799999875432 334678999999999999999999998866544
Q ss_pred -eEEEEeccCCCChHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecc
Q 001988 797 -KALVLEYMSNGSLEDCLHSS-----NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDF 870 (985)
Q Consensus 797 -~~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~Df 870 (985)
.++||||+++|+|.+++... ...+++.....++.|++.||+|| |+.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchheEEECCCCeEEECCc
Confidence 78999999999999988543 23578999999999999999999 7899999999999999999999999999
Q ss_pred cCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhh
Q 001988 871 GMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAA 937 (985)
Q Consensus 871 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~ 937 (985)
|+++.+.............++..|+|||.+....++.++|+ |++|++++|+++ +..+...... ...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv-~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 236 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDV-WAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQ 236 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccch-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99987653332222222335678999999988889999999 999999999987 5554432211 112
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 938 KEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 938 ~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+..++.++.+++.+||..+|++||++.|+++.|+++
T Consensus 237 ~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 237 PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 234567899999999999999999999999999875
No 147
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.98 E-value=1.9e-32 Score=305.88 Aligned_cols=230 Identities=22% Similarity=0.229 Sum_probs=190.8
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|++++... ...+.+..|..+++++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 788999999976422 2345678899999998 799999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Cccc
Confidence 99999887653 689999999999999999999 79999999999999999999999999999987532111 1223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcch-----hh---------------hhHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-----HF---------------AAKEQCLLSIF 946 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-----~~---------------~~~~~~~~~l~ 946 (985)
..+||+.|+|||.+.+..++.++|+ |++|+.++++++|..++.... .. ..+...+.++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 233 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDW-WALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAS 233 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccce-echHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHH
Confidence 4579999999999999999999999 999999999999987764210 00 01122456788
Q ss_pred HHHHHccCCCCCCCCC------HHHHHH
Q 001988 947 SLALECTMESPEKRID------AKDTIT 968 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt------~~ev~~ 968 (985)
+++.+|++.||.+||+ +.++++
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999999999999997 566653
No 148
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.98 E-value=2.9e-32 Score=302.51 Aligned_cols=229 Identities=21% Similarity=0.247 Sum_probs=189.6
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.+ +++.||+|.++... ......+..|.+++... +||+|+++++++.+.++.++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999875 78899999997542 22345567788888765 899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++.... .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFL---HSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Ccee
Confidence 99999987653 678999999999999999999 78999999999999999999999999999987532111 1233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||.+.+..++.++|+ |++|++++++++|..+......... +..+..++.+++.+|+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDW-WSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFER 233 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccch-hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccC
Confidence 4569999999999999999999999 9999999999999876544322111 112456788999999999
Q ss_pred CCCCCCCHH-HHH
Q 001988 956 SPEKRIDAK-DTI 967 (985)
Q Consensus 956 ~P~~RPt~~-ev~ 967 (985)
||++||++. ++.
T Consensus 234 dP~~R~~~~~~~~ 246 (316)
T cd05620 234 DPTRRLGVVGNIR 246 (316)
T ss_pred CHHHcCCChHHHH
Confidence 999999985 444
No 149
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.98 E-value=6.8e-32 Score=291.28 Aligned_cols=241 Identities=25% Similarity=0.415 Sum_probs=201.8
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.++|+..++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|+||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 467888999999999999999988899999999875533 3467899999999999999999999874 45689999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++... +..+++.++..++.|++.||+|| |+.|++||||||+||++++++.++++|||++........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFI---ERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-c
Confidence 999999998754 44688999999999999999999 889999999999999999999999999999987642221 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
......++..|+|||.+..+.++.++|+ |++|+.++++++ ++.+....... +.+...+.++.+++.
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDV-WSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMR 237 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccch-HHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 2223346778999999988889999999 999999999997 77655422111 112234578999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
+|+..+|++||+++++...|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 238 LCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999999875
No 150
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.98 E-value=4.6e-32 Score=295.47 Aligned_cols=244 Identities=23% Similarity=0.368 Sum_probs=198.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDF 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~ 796 (985)
.+++|...+.||+|+||.||+|.+. .+..||+|.+...... ....+.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567888999999999999999875 3567999988654322 34568899999999999999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC---cEEE
Q 001988 797 KALVLEYMSNGSLEDCLHSSN------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHL 867 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~---~~kl 867 (985)
.++||||+++++|.++++..+ ..+++..+.+++.||+.|++|| |+++++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL---EENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchheEEEeccCCCcceEe
Confidence 999999999999999997653 2588999999999999999999 789999999999999998765 6999
Q ss_pred ecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-----------
Q 001988 868 SDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF----------- 935 (985)
Q Consensus 868 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~----------- 935 (985)
+|||+++.+..............+..|+|||++.+..++.++|+ |++|++++++++ +..+.......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 239 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDV-WSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR 239 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999987633222111122234568999999999999999999 999999999886 66544322111
Q ss_pred -hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 936 -AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 936 -~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
..+..++.++.+++.+|++.+|++||++.++++.|.
T Consensus 240 ~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 240 LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 112234578899999999999999999999999875
No 151
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.98 E-value=7e-32 Score=297.15 Aligned_cols=247 Identities=24% Similarity=0.394 Sum_probs=200.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCc--EEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGV--EIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~--~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv 800 (985)
++|+..+.||+|+||.||+|..+ ++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999865 333 47888887432 23346788999999999 799999999999999999999
Q ss_pred EeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcE
Q 001988 801 LEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 865 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~ 865 (985)
|||+++|+|.+++.... ..+++.....++.|++.|++|| |++||+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYL---SEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCcCCcceEEECCCCeE
Confidence 99999999999997532 2478889999999999999999 78999999999999999999999
Q ss_pred EEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh---------
Q 001988 866 HLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF--------- 935 (985)
Q Consensus 866 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~--------- 935 (985)
||+|||++..... .........+..|+|||.+....++.++|+ |++|+.++++++ +..++......
T Consensus 159 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 159 KIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDV-WSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred EECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 9999999864321 111111223567999999988889999999 999999999986 65544322111
Q ss_pred ---hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhcc
Q 001988 936 ---AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTLSK 979 (985)
Q Consensus 936 ---~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~~ 979 (985)
..+..++.++.+++.+||+.+|.+||++.++++.++.+.+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 11223567899999999999999999999999999998876543
No 152
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.98 E-value=4.9e-32 Score=296.50 Aligned_cols=245 Identities=25% Similarity=0.392 Sum_probs=203.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-----CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCce
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-----DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFK 797 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~ 797 (985)
+.|+..+.||+|+||.||+|.+. ++..||||.+...... ....+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677789999999999999854 4678999999866443 46789999999999999999999999977 5578
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++++|.+++......+++..+..++.|++.||+|| |+.|++||||||+||+++.++.+||+|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYL---GSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 999999999999999987765789999999999999999999 78999999999999999999999999999998875
Q ss_pred CCCCcc-eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh----------------------
Q 001988 878 GEDEST-MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH---------------------- 934 (985)
Q Consensus 878 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~---------------------- 934 (985)
...... ......++..|+|||......++.++|+ |++|+.+++++++..+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di-~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDV-WSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccch-HHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 322211 1112335667999999988899999999 9999999999997754332110
Q ss_pred -----hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 935 -----FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 935 -----~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
.+.+..++.++.+++.+||+.+|.+||+|.|++++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0112235678999999999999999999999999998763
No 153
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.98 E-value=7e-32 Score=293.26 Aligned_cols=241 Identities=25% Similarity=0.367 Sum_probs=193.2
Q ss_pred cCCceeeccCceeEEEEEEcC-Cc--EEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC------Cce
Q 001988 729 AENNIIGIGGFGSVYRARLED-GV--EIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND------DFK 797 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~~~-~~--~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~------~~~ 797 (985)
..++.||+|+||.||+|+..+ +. .||+|.++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999998753 32 69999887542 23456788999999999999999999987432 246
Q ss_pred EEEEeccCCCChHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 798 ALVLEYMSNGSLEDCLHSS-----NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
++||||+++|+|.+++... ...+++.....++.|++.||+|| |+++|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999887432 23578999999999999999999 789999999999999999999999999999
Q ss_pred ceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHH
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKE 939 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~ 939 (985)
++.+.............+++.|+|||......++.+.|+ |++|+.++++++ ++.+....... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDV-WSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPP 237 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 987643332211222346778999999999999999999 999999999987 55543321110 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
.+++.+.+++.+||..+|++||++.++++.|+++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 238 DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 3567799999999999999999999999999874
No 154
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.98 E-value=3.6e-32 Score=303.12 Aligned_cols=230 Identities=23% Similarity=0.213 Sum_probs=191.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCC-CCeeeEEeeeecCCceEEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRH-RNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h-~niv~l~~~~~~~~~~~lv~ 801 (985)
+|...+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+..|.++++.++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999865 67889999987542 2334567889999999976 56888999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++.... .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~- 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG- 155 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-
Confidence 9999999999987654 578899999999999999999 78999999999999999999999999999987532211
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~ 950 (985)
......+||+.|+|||++.+..++.++|+ |++|++++++++|+.+........ .+...+.++.+++.
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~ 233 (324)
T cd05587 156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDW-WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICK 233 (324)
T ss_pred -CceeeecCCccccChhhhcCCCCCcccch-hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 12234569999999999999999999999 999999999999987764332111 12234567889999
Q ss_pred HccCCCCCCCCCH
Q 001988 951 ECTMESPEKRIDA 963 (985)
Q Consensus 951 ~cl~~~P~~RPt~ 963 (985)
+|+..+|.+||+.
T Consensus 234 ~~l~~~P~~R~~~ 246 (324)
T cd05587 234 GLLTKHPAKRLGC 246 (324)
T ss_pred HHhhcCHHHcCCC
Confidence 9999999999976
No 155
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=3.3e-32 Score=303.34 Aligned_cols=226 Identities=29% Similarity=0.291 Sum_probs=186.5
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHH-HHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECE-VIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~-il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||+||+|+.. +++.||+|++.+.. ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 78999999987542 122344555555 45778999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++.... .+++.....++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYL---HSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTS 154 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cccc
Confidence 99999987654 678889999999999999999 78999999999999999999999999999987542211 2233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||.+.+..++.++|+ |++|+.+++++++..++....... .+...+.++.+++.+|++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Dv-wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDW-WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQK 233 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccc-cccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 4569999999999999999999999 999999999999887654322111 1122467789999999999
Q ss_pred CCCCCCCHH
Q 001988 956 SPEKRIDAK 964 (985)
Q Consensus 956 ~P~~RPt~~ 964 (985)
+|.+||++.
T Consensus 234 ~p~~R~~~~ 242 (323)
T cd05575 234 DRTKRLGAK 242 (323)
T ss_pred CHHhCCCCC
Confidence 999999985
No 156
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.98 E-value=7e-32 Score=291.28 Aligned_cols=229 Identities=19% Similarity=0.313 Sum_probs=187.0
Q ss_pred ceeeccCceeEEEEEEcC-------------CcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 732 NIIGIGGFGSVYRARLED-------------GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~-------------~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
+.||+|+||.||+|...+ ..+||+|.+..........+..|+.++++++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 358999999999997532 2358999887655445567889999999999999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc-------EEEeccc
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV-------AHLSDFG 871 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~-------~kl~DfG 871 (985)
+||||+++|+|..++......+++..+.+++.||++|++|| |+++|+||||||+||+++.++. +|++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYL---EDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh---hhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999999887666789999999999999999999 8999999999999999987664 8999999
Q ss_pred CceeccCCCCcceecccccccccccccccc-cCccchhhhcccccccchhhhc-ccccccCcchhhhh----------HH
Q 001988 872 MAKLLSGEDESTMRTQTLATIGYMAPDEIF-VGELSLKRWVNDLLPVSLVEVV-DKSLLSGEEKHFAA----------KE 939 (985)
Q Consensus 872 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~dv~~~~g~~~~~i~-~~~~~~~~~~~~~~----------~~ 939 (985)
++...... ....++..|+|||.+. ...++.++|+ |++|+.+++++ .+..+......... ..
T Consensus 158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 230 (262)
T cd05077 158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADK-WSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVT 230 (262)
T ss_pred CCccccCc------ccccccccccChhhhcCCCCCCchhHH-HHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCC
Confidence 98765321 2235788999999886 4668889999 99999999997 45554332211110 00
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
...+++.+++.+||+.||.+||++.++++.+
T Consensus 231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 231 PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1246789999999999999999999998875
No 157
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.98 E-value=9.4e-32 Score=289.46 Aligned_cols=235 Identities=23% Similarity=0.364 Sum_probs=192.4
Q ss_pred eeccCceeEEEEEEc---CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE---DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||.||+|.+. ++..||+|++...... ..+.+.+|+.++++++||||+++++++.. +..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence 899999999999764 4567999998765332 34568999999999999999999999864 467899999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce-eccc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM-RTQT 888 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~-~~~~ 888 (985)
.+++......+++.++.+++.|++.|++|| |++|++||||||+||+++.++.+||+|||++..+........ ....
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYL---EGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 999987666789999999999999999999 789999999999999999999999999999986543322111 1122
Q ss_pred ccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHHHccCC
Q 001988 889 LATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLALECTME 955 (985)
Q Consensus 889 ~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~~cl~~ 955 (985)
.+++.|+|||.+....++.++|+ |++|++++++++ +..+....... ..+..+++++.+++.+||..
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~ 237 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDV-WSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIY 237 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhH-HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 24578999999988889999999 999999999886 66554322111 11223567899999999999
Q ss_pred CCCCCCCHHHHHHHHHHh
Q 001988 956 SPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 956 ~P~~RPt~~ev~~~L~~i 973 (985)
+|++||++.+|.+.|+.+
T Consensus 238 ~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 238 KWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ChhhCcCHHHHHHHHhhh
Confidence 999999999999998764
No 158
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.98 E-value=4.8e-32 Score=296.35 Aligned_cols=240 Identities=26% Similarity=0.387 Sum_probs=196.9
Q ss_pred cCCceeeccCceeEEEEEE-----cCCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEEE
Q 001988 729 AENNIIGIGGFGSVYRARL-----EDGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKALV 800 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~-----~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~lv 800 (985)
+..+.||+|+||+||++.. .+++.||+|.++.... .....+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7889999999999988653 3678899999876532 2456788999999999999999999988653 457899
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++|+|.+++... .+++.++..++.|++.|++|| |+++|+||||||+||++++++.+||+|||+++.+....
T Consensus 87 ~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 87 MEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYL---HSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred ecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHH---HHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 9999999999999764 489999999999999999999 78999999999999999999999999999998764322
Q ss_pred Ccc-eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh---------------h---------
Q 001988 881 EST-MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH---------------F--------- 935 (985)
Q Consensus 881 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~---------------~--------- 935 (985)
... ......++..|+|||.+....++.++|+ |++|+.+++++++..+....+. .
T Consensus 162 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di-~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd05080 162 EYYRVREDGDSPVFWYAVECLKENKFSYASDV-WSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG 240 (283)
T ss_pred hhhccCCCCCCCceeeCHhHhcccCCCccccc-HHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC
Confidence 211 1122335667999999988889999999 9999999999998654322110 0
Q ss_pred ---hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 936 ---AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 936 ---~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
+.+..++.++.+++.+||+.+|++||+++++++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 001224578999999999999999999999999998875
No 159
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.98 E-value=4.7e-32 Score=323.42 Aligned_cols=247 Identities=24% Similarity=0.299 Sum_probs=202.0
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...++||+|+||.||+|+.. +++.||+|+++.... ...+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57888999999999999999865 689999999975422 23457889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEeccc
Q 001988 802 EYMSNGSLEDCLHSS----------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFG 871 (985)
Q Consensus 802 e~~~~gsL~~~l~~~----------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfG 871 (985)
||++||+|.+++... ....++...++++.||++||+|| |++||+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL---Hs~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV---HSKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH---HHCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988642 12356678889999999999999 78999999999999999999999999999
Q ss_pred CceeccCCCC----------------cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh
Q 001988 872 MAKLLSGEDE----------------STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF 935 (985)
Q Consensus 872 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~ 935 (985)
+++....... .......+||+.|||||.+.+..++.++|+ |++|+.++++++|..+.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDI-WSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDI-YALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHH-HHHHHHHHHHHHCCCCCCCcchh
Confidence 9987621110 011123469999999999999999999999 99999999999988765332110
Q ss_pred h--------------hHHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHhHhh
Q 001988 936 A--------------AKEQCLLSIFSLALECTMESPEKRI-DAKDTITRLLKIRDT 976 (985)
Q Consensus 936 ~--------------~~~~~~~~l~~l~~~cl~~~P~~RP-t~~ev~~~L~~i~~~ 976 (985)
. .....+..+.+++.+|+..||++|| ++.++.+.++...+.
T Consensus 238 ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 KISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 1123456789999999999999996 677777778776553
No 160
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=3.8e-32 Score=294.54 Aligned_cols=238 Identities=22% Similarity=0.317 Sum_probs=198.2
Q ss_pred hcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 725 TDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
.++|+..+.||+|+||.||+|.. .+++.||+|++..........+++|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35788999999999999999986 47889999999766545556788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|.++++..+ .+++..+..++.|++.|++|| |+++|+|||+||+||++++++.+||+|||++..+.... .
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~ 161 (267)
T cd06646 88 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYL---HSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--A 161 (267)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEEECcCccceeecccc--c
Confidence 99999999987653 678999999999999999999 78999999999999999999999999999998763221 1
Q ss_pred eecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcchh----------------hhhHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH----------------FAAKEQCLLS 944 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~----------------~~~~~~~~~~ 944 (985)
......+++.|+|||.+. ...++.++|+ |++|+.+++++++..+...... .......+.+
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dv-ws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDI-WAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSST 240 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhH-HHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHH
Confidence 123346889999999874 4557788999 9999999999988764321110 0011234578
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 945 IFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+.+++++||..+|++||++.++++.
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcC
Confidence 9999999999999999999999864
No 161
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=4.4e-32 Score=300.87 Aligned_cols=229 Identities=23% Similarity=0.269 Sum_probs=189.5
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 67899999997642 23345567788888765 899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++.... .+++.+...++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFL---HSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKTC 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--Ccee
Confidence 99999987643 678899999999999999999 78999999999999999999999999999987642211 1223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
...||+.|+|||.+.+..++.++|+ |++|+.++++++|..+........ .+.....++.+++.+|+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Dv-wslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDW-WSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVR 233 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhh-hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhcc
Confidence 4569999999999999899999999 999999999999887654332111 1112456788999999999
Q ss_pred CCCCCCCHH-HHH
Q 001988 956 SPEKRIDAK-DTI 967 (985)
Q Consensus 956 ~P~~RPt~~-ev~ 967 (985)
+|++||++. ++.
T Consensus 234 ~P~~R~~~~~~l~ 246 (316)
T cd05619 234 EPERRLGVKGDIR 246 (316)
T ss_pred CHhhcCCChHHHH
Confidence 999999997 553
No 162
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.98 E-value=6.6e-32 Score=299.14 Aligned_cols=236 Identities=20% Similarity=0.297 Sum_probs=194.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|...+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999865 678899999875432 2334677899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++ ++.+++...+..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-- 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc--
Confidence 975 89888877666788999999999999999999 789999999999999999999999999999976532221
Q ss_pred eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......+++.|+|||.+.+ ..++.++|+ |++|++++++++|..++.......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDM-WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 1223457899999998865 457889999 999999999999886543221000
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.....+.++.+++.+|+..||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00113457789999999999999999999987
No 163
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.98 E-value=7.5e-32 Score=297.65 Aligned_cols=245 Identities=25% Similarity=0.403 Sum_probs=198.1
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCc--EEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGV--EIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~--~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~l 799 (985)
.++|+..+.||+|+||.||+|.++ ++. .+|+|.++... ......+.+|++++.++ +||||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357788899999999999999864 454 46888776432 23456788999999999 89999999999999999999
Q ss_pred EEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc
Q 001988 800 VLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 864 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~ 864 (985)
||||+++|+|.++++..+ ..+++.+++.++.|++.|++|| |++|++||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEecCCCc
Confidence 999999999999997542 2578899999999999999999 7899999999999999999999
Q ss_pred EEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh--------
Q 001988 865 AHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------- 935 (985)
Q Consensus 865 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------- 935 (985)
+||+|||+++... .........++..|+|||.+....++.++|+ |++|+.++++++ +..+.......
T Consensus 163 ~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 238 (303)
T cd05088 163 AKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDV-WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 238 (303)
T ss_pred EEeCccccCcccc---hhhhcccCCCcccccCHHHHhccCCcccccc-hhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence 9999999986431 1111112234668999999988888999999 999999999997 55543221111
Q ss_pred ----hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 936 ----AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 936 ----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
..+..++.++.+++.+||+.+|++||++.++++.+..+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122457789999999999999999999999999887654
No 164
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=2.9e-32 Score=308.79 Aligned_cols=239 Identities=19% Similarity=0.228 Sum_probs=197.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
..++|...+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+++++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567889999999999999999865 78899999986431 2234457889999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++|+|.+++... .+++.....++.|++.||+|| |++||+||||||+|||++.++.+||+|||+++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999998754 477888889999999999999 7899999999999999999999999999999876432
Q ss_pred CCcceecccccccccccccccccC----ccchhhhcccccccchhhhcccccccCcchhhh---------------hHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVG----ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQ 940 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~ 940 (985)
.. ......+||+.|+|||.+... .++.++|+ |++|+.++++++|..++....... ....
T Consensus 196 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di-wSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (370)
T cd05596 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW-WSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIE 273 (370)
T ss_pred Cc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceee-eehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCC
Confidence 21 122345699999999988653 47889999 999999999999987654432111 1112
Q ss_pred HHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEK--RIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~--RPt~~ev~~~ 969 (985)
.+.++.+++.+|+..+|.+ ||++.|++..
T Consensus 274 ~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 274 ISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 4678899999999999987 9999999653
No 165
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.98 E-value=4.8e-32 Score=296.44 Aligned_cols=236 Identities=22% Similarity=0.286 Sum_probs=197.3
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
+|+..+.||+|+||.||++... +++.||+|++..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4777899999999999999864 789999999875422 123456789999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 803 YMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|+++|+|.+++... ...+++..+..++.|++.|++|| |+.+|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDL---HRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99999999988654 34689999999999999999999 789999999999999999999999999999987542221
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh---------------hHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQCLLSIF 946 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~~~~~l~ 946 (985)
.....|++.|+|||.+.+..++.++|+ |++|++++++++|..+........ .+...+..+.
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di-ws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd05605 158 ---IRGRVGTVGYMAPEVVKNERYTFSPDW-WGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAAR 233 (285)
T ss_pred ---cccccCCCCccCcHHhcCCCCCccccc-hhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHH
Confidence 223468999999999998889999999 999999999999887665332110 1123567789
Q ss_pred HHHHHccCCCCCCCC-----CHHHHHHH
Q 001988 947 SLALECTMESPEKRI-----DAKDTITR 969 (985)
Q Consensus 947 ~l~~~cl~~~P~~RP-----t~~ev~~~ 969 (985)
+++.+||..||++|| ++.++++.
T Consensus 234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 234 SICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 999999999999999 78888653
No 166
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.98 E-value=8.8e-32 Score=295.44 Aligned_cols=235 Identities=24% Similarity=0.344 Sum_probs=189.8
Q ss_pred cCccCCceeeccCceeEEEEEEc--CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhc---CCCCeeeEEeeee-----c
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE--DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNI---RHRNLVKIISSCS-----N 793 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~--~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l---~h~niv~l~~~~~-----~ 793 (985)
++|...+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|+.+++++ +||||++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 4688999998754322 234566788887766 6999999999985 2
Q ss_pred CCceEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 794 DDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 794 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
....++||||++ ++|.+++... ...+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456889999996 6899998754 34588999999999999999999 789999999999999999999999999999
Q ss_pred ceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh---------------
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA--------------- 937 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~--------------- 937 (985)
++..... .......||+.|+|||.+....++.++|+ |++|+.+++++++..+.........
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDL-WSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccch-HHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 9876432 22334568999999999988899999999 9999999999988765543211000
Q ss_pred -----------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -----------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -----------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....++.+.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0113456689999999999999999999975
No 167
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.98 E-value=9.7e-32 Score=291.48 Aligned_cols=245 Identities=23% Similarity=0.441 Sum_probs=202.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CC---cEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DG---VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
.++|...+.||+|+||.||+|... ++ ..||+|.++... ....+.+.+|++++++++|||++++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356778899999999999999864 33 369999987553 2335678899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++++|.+++......+++.++..++.|++.|++|| |+.|++||||||+||++++++.+|++|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 9999999999999987666789999999999999999999 7899999999999999999999999999999876433
Q ss_pred CCccee-cccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHH
Q 001988 880 DESTMR-TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSI 945 (985)
Q Consensus 880 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l 945 (985)
...... .....++.|+|||.+....++.+.|+ |++|+.++++++ +..+...... .+....++.++
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv-~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDV-WSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAV 239 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHH-HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 222111 11223567999999988889999999 999999999886 6655432211 11123356789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 946 FSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
.+++.+||..+|++||++.++++.|.++
T Consensus 240 ~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 240 YQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999999875
No 168
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.98 E-value=5.7e-32 Score=294.59 Aligned_cols=230 Identities=24% Similarity=0.285 Sum_probs=190.9
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||.||+++.+ +|+.||+|.+..... .....+..|++++++++||||+++++++..+.+.++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 789999999864321 2234566799999999999999999999999999999999999999
Q ss_pred HHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccc
Q 001988 810 EDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888 (985)
Q Consensus 810 ~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 888 (985)
.+++... ...+++..+..++.|++.|++|| |+.||+||||||+||++++++.+||+|||++..+.... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHL---HSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeecc
Confidence 9888654 33588999999999999999999 78999999999999999999999999999998764322 22334
Q ss_pred ccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh----------------HHHHHHHHHHHHHHc
Q 001988 889 LATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------KEQCLLSIFSLALEC 952 (985)
Q Consensus 889 ~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------~~~~~~~l~~l~~~c 952 (985)
.|++.|+|||++....++.++|+ |++|+.+++++++..+......... ....+.++.+++.+|
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Dv-wslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 233 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDW-FAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLF 233 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhH-HHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHH
Confidence 68999999999999999999999 9999999999998876543211000 012457789999999
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITRL 970 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L 970 (985)
++.+|.+||++.|+++.+
T Consensus 234 L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 234 LAKKPEDRLGSREKNDDP 251 (277)
T ss_pred hccCHhhCCCCccchhhh
Confidence 999999999998766443
No 169
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.98 E-value=4.2e-32 Score=301.62 Aligned_cols=230 Identities=24% Similarity=0.242 Sum_probs=192.9
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||||++++.. ......+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 67899999997542 23345677899999888 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++..+..++.|++.||+|| |+.+|+||||||+||++++++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFL---HERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTS 154 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Cccc
Confidence 99999887654 689999999999999999999 79999999999999999999999999999987532222 1223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||.+.+..++.++|+ |++|+.++++++|..+........ .+..+++++.+++.+||..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~Di-wslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDW-WALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTK 233 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhh-hhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccC
Confidence 4569999999999999999999999 999999999999887654332111 1123567889999999999
Q ss_pred CCCCCCCH-----HHHHH
Q 001988 956 SPEKRIDA-----KDTIT 968 (985)
Q Consensus 956 ~P~~RPt~-----~ev~~ 968 (985)
||++||++ .++++
T Consensus 234 dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CHHHcCCCCCCCHHHHhc
Confidence 99999999 77764
No 170
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=3.9e-32 Score=296.34 Aligned_cols=229 Identities=25% Similarity=0.270 Sum_probs=190.8
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||+||+|... +++.||+|.+...... ..+.+..|++++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 7889999998754222 235677899999999999999999999999999999999999999
Q ss_pred HHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 810 EDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 810 ~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
.+++.. ....+++..+..++.|++.||+|| |+++|+||||||+||++++++.+||+|||++..+..... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHL---HQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 988753 234689999999999999999999 789999999999999999999999999999987643221 223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh---------------hhHHHHHHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQCLLSIFSLALE 951 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~l~~l~~~ 951 (985)
...||+.|+|||.+.+..++.++|+ |++|++++++++++.++...... ..++..++.+.+++.+
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~Dv-wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 234 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDY-FALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEA 234 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccH-HHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHH
Confidence 4568999999999999999999999 99999999999988765432110 0122356789999999
Q ss_pred ccCCCCCCCC-----CHHHHHH
Q 001988 952 CTMESPEKRI-----DAKDTIT 968 (985)
Q Consensus 952 cl~~~P~~RP-----t~~ev~~ 968 (985)
|++.||++|| ++.++++
T Consensus 235 ~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 235 LLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HhcCCHHHhcCCCCCCHHHHhc
Confidence 9999999999 6666665
No 171
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.98 E-value=1e-31 Score=289.23 Aligned_cols=238 Identities=28% Similarity=0.424 Sum_probs=201.8
Q ss_pred hcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.++|+..+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888899999999999999875 78999999976643 5678899999999999999999999999889999999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++.... ..+++..+..++.|++.|+.|| |+++++||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL---EEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999997653 3689999999999999999999 789999999999999999999999999999987632111
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh------------hHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA------------AKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~------------~~~~~~~~l~~l~~ 950 (985)
...++..|+|||.+..+.++.++|+ |++|+.++++++ +..+....+... .+..+++++.+++.
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di-~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 233 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDV-WSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMK 233 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHH-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHH
Confidence 2235668999999988899999999 999999999986 655443322111 12235678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHHh
Q 001988 951 ECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+|+..+|++||++.|++++|..+
T Consensus 234 ~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 234 DCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHhccChhhCcCHHHHHHHHhcC
Confidence 99999999999999999998753
No 172
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.98 E-value=8e-32 Score=296.60 Aligned_cols=243 Identities=23% Similarity=0.407 Sum_probs=196.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-----------------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-----------------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKI 787 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-----------------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l 787 (985)
++|+..+.||+|+||.||++... +...||+|+++.... .....+.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998532 244699999875532 335678999999999999999999
Q ss_pred EeeeecCCceEEEEeccCCCChHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCE
Q 001988 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSN----------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNV 857 (985)
Q Consensus 788 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Ni 857 (985)
++++...+..++||||+++|+|.+++.... ..+++.+...++.|++.|++|| |+.|++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHH---HHCCeecccCChheE
Confidence 999999999999999999999999987542 2367788999999999999999 789999999999999
Q ss_pred EEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc--cccccCcchh-
Q 001988 858 LLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD--KSLLSGEEKH- 934 (985)
Q Consensus 858 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~--~~~~~~~~~~- 934 (985)
++++++.+||+|||+++.+.............+++.|+|||....+.++.++|+ |++|+.++++++ +..+......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di-wSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDV-WAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhh-hHHHHHHHHHHHhCCCCCccccChH
Confidence 999999999999999987643222221222335678999999888899999999 999999999987 3333221110
Q ss_pred ------------------hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 935 ------------------FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 935 ------------------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
.+.+..++..+.+++.+||+.+|++||++.|+.+.|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 QVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 01112356789999999999999999999999998863
No 173
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.98 E-value=5.8e-32 Score=290.15 Aligned_cols=236 Identities=28% Similarity=0.407 Sum_probs=196.9
Q ss_pred ceeeccCceeEEEEEEcCCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChH
Q 001988 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLE 810 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 810 (985)
++||+|+||.||+|...+++.||+|.+...... ....+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999877999999998765443 4567899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccccc
Q 001988 811 DCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890 (985)
Q Consensus 811 ~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~g 890 (985)
+++......+++..+..++.+++.|++|| |+.+++||||||+||+++.++.+||+|||.++...............+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~l---H~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 99987655788999999999999999999 889999999999999999999999999999986542221111112234
Q ss_pred ccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHHHHHHccCCCC
Q 001988 891 TIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFSLALECTMESP 957 (985)
Q Consensus 891 t~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~l~~~cl~~~P 957 (985)
+..|+|||.+.++.++.++|+ |++|++++++++ +..+...... ...++.++.++.+++.+|+..+|
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di-~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 236 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDV-WSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDP 236 (251)
T ss_pred eeccCChHhhccCCCCcchhH-HHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccCh
Confidence 667999999998899999999 999999999997 5544322110 11223456789999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 001988 958 EKRIDAKDTITRLL 971 (985)
Q Consensus 958 ~~RPt~~ev~~~L~ 971 (985)
.+||++.|+++.|.
T Consensus 237 ~~Rp~~~ell~~l~ 250 (251)
T cd05041 237 ENRPSFSEIYNELQ 250 (251)
T ss_pred hhCcCHHHHHHHhh
Confidence 99999999999885
No 174
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.98 E-value=1.3e-31 Score=288.99 Aligned_cols=240 Identities=25% Similarity=0.404 Sum_probs=199.3
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
++|...+.||+|+||.||+|..+++..||+|.+.... ...+.+.+|++++++++|||++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 5688889999999999999998777789999886543 234678899999999999999999998854 56789999999
Q ss_pred CCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 806 NGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 806 ~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
+|+|.+++... ...+++..+..++.|+++||+|| |+.|++||||||+||++++++.+||+|||+++....... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYI---ERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-TA 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-cc
Confidence 99999999764 34578999999999999999999 789999999999999999999999999999987643221 12
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLALE 951 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~~ 951 (985)
.....++..|+|||......++.++|+ |++|++++++++ +..+....... ..++..+..+.+++.+
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDV-WSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKL 238 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHH
Confidence 222346778999999988899999999 999999999998 66654332111 1123456789999999
Q ss_pred ccCCCCCCCCCHHHHHHHHHH
Q 001988 952 CTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~L~~ 972 (985)
||..+|.+||++.++++.|++
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999875
No 175
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=4.4e-32 Score=309.05 Aligned_cols=238 Identities=21% Similarity=0.258 Sum_probs=194.1
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
.+|++.+.||+|+||.||+|+.. +++.||||++.+.. ......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999864 78999999986532 123456789999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC-
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED- 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~- 880 (985)
||+++|+|.+++...+ .+++.....++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 9999999999997654 578888889999999999999 78999999999999999999999999999985431000
Q ss_pred ----------------------------------------CcceecccccccccccccccccCccchhhhcccccccchh
Q 001988 881 ----------------------------------------ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLV 920 (985)
Q Consensus 881 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~ 920 (985)
........+||+.|||||++.+..++.++|+ |++|++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvily 235 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW-WSVGVILY 235 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceee-eeccceee
Confidence 0000123469999999999999999999999 99999999
Q ss_pred hhcccccccCcchhhhh---------------HHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 001988 921 EVVDKSLLSGEEKHFAA---------------KEQCLLSIFSLALECTMESPEKRI---DAKDTITR 969 (985)
Q Consensus 921 ~i~~~~~~~~~~~~~~~---------------~~~~~~~l~~l~~~cl~~~P~~RP---t~~ev~~~ 969 (985)
++++|+.++........ ....+.++.+++.+|+ .+|.+|+ ++.|++..
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999876543321110 1123566788888876 5999999 88888754
No 176
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.98 E-value=3.9e-32 Score=302.96 Aligned_cols=232 Identities=28% Similarity=0.302 Sum_probs=188.9
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHH-HHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECE-VIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~-il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +|+.||+|++.+.. ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999864 78999999987542 223345556655 46778999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++.... .+++.....++.||+.||+|| |+.||+||||||+||++++++.+||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYL---HSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTT 154 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcc
Confidence 99999887653 688999999999999999999 78999999999999999999999999999987532211 2233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||.+.+..++.++|+ |++|+.++++++|..+......... ....+.++.+++.+|+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Dv-wslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~ 233 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDW-WCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEK 233 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCcc-ccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhcc
Confidence 4569999999999999999999999 9999999999998876543321111 112456788999999999
Q ss_pred CCCCCCCHHHHHHHH
Q 001988 956 SPEKRIDAKDTITRL 970 (985)
Q Consensus 956 ~P~~RPt~~ev~~~L 970 (985)
+|.+||++.+.++.+
T Consensus 234 ~p~~R~~~~~~~~~i 248 (325)
T cd05604 234 DRQRRLGAKEDFLEI 248 (325)
T ss_pred CHHhcCCCCCCHHHH
Confidence 999999887544443
No 177
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=9.5e-33 Score=302.52 Aligned_cols=238 Identities=21% Similarity=0.350 Sum_probs=202.6
Q ss_pred cCCceeeccCceeEEEEEEc----CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 729 AENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
...++||+|.||.|++|.|. +...||||.++..... ....|.+|+.+|.+++|||++++||+..+ ...+||||+
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34578999999999999875 3346899999877554 67899999999999999999999999987 566799999
Q ss_pred cCCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~-~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
++.|+|.+++++ ....+-......++.|||.|+.|| .+++.||||+..+|+++.....|||+|||+.+.+...+..
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL---eskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL---ESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999999998 455677788889999999999999 8999999999999999999999999999999998765544
Q ss_pred ce-ecccccccccccccccccCccchhhhcccccccchhhhccccc-cc-C-----------cchhhhhHHHHHHHHHHH
Q 001988 883 TM-RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL-LS-G-----------EEKHFAAKEQCLLSIFSL 948 (985)
Q Consensus 883 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~-~~-~-----------~~~~~~~~~~~~~~l~~l 948 (985)
.. .....-.+.|+|||.+....++-++|| |++|+.+|||+++.- ++ + .....+.++.|++.++++
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDv-WmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~i 347 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDV-WMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQI 347 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchh-hhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHH
Confidence 33 333345678999999999999999999 999999999998642 21 1 112344567799999999
Q ss_pred HHHccCCCCCCCCCHHHHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
|..||..+|.+||++.++.+.+-
T Consensus 348 mk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 348 MKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred HHHhccCCccccccHHHHHHhHH
Confidence 99999999999999999985543
No 178
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=5.4e-32 Score=306.15 Aligned_cols=239 Identities=19% Similarity=0.227 Sum_probs=195.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
..++|+..+.||+|+||.||+|+.. +++.||+|++.+. .......+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4578899999999999999999975 6889999998643 12234567899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++|+|.+++... .+++.....++.|++.||+|| |+++|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~L---H~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAI---HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999998754 478888999999999999999 7899999999999999999999999999999876432
Q ss_pred CCcceecccccccccccccccccCc----cchhhhcccccccchhhhcccccccCcchhhh---------------hHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGE----LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQ 940 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~ 940 (985)
.. ......+||+.|+|||.+.... ++.++|+ |++|++++++++|..++....... ....
T Consensus 196 ~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~Di-wSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 273 (370)
T cd05621 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW-WSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVE 273 (370)
T ss_pred Cc-eecccCCCCcccCCHHHHhccCCCCCCCcccCE-EeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCccc
Confidence 21 1223457999999999987543 6788999 999999999999987654332110 1112
Q ss_pred HHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEK--RIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~--RPt~~ev~~~ 969 (985)
.+..+.+++..|+..+|.+ ||++.|+++.
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 3566888999999755543 8899998875
No 179
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.98 E-value=9.8e-32 Score=289.13 Aligned_cols=237 Identities=19% Similarity=0.252 Sum_probs=200.4
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC-CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ-CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
+|+..+.||.|+||.||++... +++.||+|.++.. .....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4777899999999999999865 7899999998643 2334567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++|+|.+++... ...+++.....++.|++.|+.|| |++||+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI---HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--
Confidence 999999988753 44578999999999999999999 899999999999999999999999999999987643222
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQCLLSIFSLALE 951 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~l~~l~~~ 951 (985)
......+++.|+|||.+....++.++|+ |++|+.+++++++..+....... ..+..++..+.+++.+
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv-~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 234 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDI-WSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQ 234 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhh-hhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHH
Confidence 2233568899999999988889999999 99999999999987765433211 1123356678999999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 001988 952 CTMESPEKRIDAKDTITR 969 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~ 969 (985)
||..+|++||++.+++.+
T Consensus 235 ~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 235 MFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhCCcccCCCHHHHhhc
Confidence 999999999999999875
No 180
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.98 E-value=8.9e-33 Score=269.34 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=203.1
Q ss_pred HhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecC-----Cce
Q 001988 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSND-----DFK 797 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~-----~~~ 797 (985)
..++|.+.+.+|.|||+-||+++ ..++..||+|++.....++.+..++|++..++++|||++++++++..+ .+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45688999999999999999998 568899999999888777788899999999999999999999987433 458
Q ss_pred EEEEeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 798 ALVLEYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTP--IIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
|++++|...|+|.+.+... +..+++.+.+.|+.++++||++| |+.. ++||||||.||++.+++.+++.|||.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l---H~~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL---HEKEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH---hccCCcccccCCCcceeEecCCCceEEEeccC
Confidence 9999999999999998653 55789999999999999999999 6666 99999999999999999999999999
Q ss_pred ceeccCCCCc-------ceecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcch---------
Q 001988 873 AKLLSGEDES-------TMRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK--------- 933 (985)
Q Consensus 873 a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~--------- 933 (985)
++...-.-.. ........|..|+|||.+. ....+.+.|+ |++|+.+++++-+..++....
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDI-WSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDI-WSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccch-hhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 8765321111 1122334789999999774 4556789999 999999999988765543221
Q ss_pred ------hhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 934 ------HFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 934 ------~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
..+.....++.+.++++.|+++||.+||++.+++.++...
T Consensus 255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1112223678899999999999999999999999998764
No 181
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.98 E-value=5.6e-32 Score=291.38 Aligned_cols=234 Identities=21% Similarity=0.308 Sum_probs=192.8
Q ss_pred eeeccCceeEEEEEEc---CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 733 IIGIGGFGSVYRARLE---DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
.||+|+||.||+|.++ ++..||+|+++.... ...+++.+|+.++++++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999753 678899999875432 235678999999999999999999999864 4678999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce-ec
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM-RT 886 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~-~~ 886 (985)
+|.+++.... .+++....+++.|++.|++|+ |++||+||||||+||++++++.+||+|||+++.+........ ..
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYL---EETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 9999997653 688999999999999999999 789999999999999999999999999999987643322111 12
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHHHHHHcc
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFSLALECT 953 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~l~~~cl 953 (985)
...++..|+|||.+....++.++|+ |++|+.++++++ +..++..... .+.+..++.++.+++.+||
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~ 235 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDV-WSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCW 235 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHh
Confidence 2234678999999988888999999 999999999997 6655443211 1123346788999999999
Q ss_pred CCCCCCCCCHHHHHHHHHH
Q 001988 954 MESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 954 ~~~P~~RPt~~ev~~~L~~ 972 (985)
+++|++||++.+|++.|+.
T Consensus 236 ~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 236 TYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ccCchhCcCHHHHHHHHhc
Confidence 9999999999999999875
No 182
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.98 E-value=1.1e-31 Score=290.86 Aligned_cols=243 Identities=25% Similarity=0.329 Sum_probs=204.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++|++++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999976 89999999886432 223567889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 802 EYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 802 e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
||+++|+|.+++... ...+++..+..++.+++.|++|| |+.||+||||||+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHM---HSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988642 34578999999999999999999 789999999999999999999999999999887543
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh--------------hhhH-HHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------------FAAK-EQCLL 943 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------------~~~~-~~~~~ 943 (985)
... ......+++.|+|||.+.+..++.++|+ |++|+.+++++++..+...... .+.+ +..+.
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDI-WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSE 235 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcH-HHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCH
Confidence 221 1223458889999999998889999999 9999999999988765422110 0111 24566
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
.+.+++.+||..+|++||++.++++.++++.
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 8999999999999999999999999998875
No 183
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.98 E-value=1.1e-31 Score=291.28 Aligned_cols=245 Identities=23% Similarity=0.357 Sum_probs=202.3
Q ss_pred cCccCCceeeccCceeEEEEEEcC----CcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLED----GVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
++|...+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998643 3469999887654 3345678999999999999999999999875 457899
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++|+|.+++......+++..+..++.|++.|++|+ |+.+++||||||+||+++.++.+|++|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL---ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 999999999999987655689999999999999999999 78999999999999999999999999999998765332
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFS 947 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~ 947 (985)
.. ......++..|+|||.+....++.++|+ |++|+.++++++ +..++..... ...+..++.++.+
T Consensus 162 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
T cd05056 162 YY-KASKGKLPIKWMAPESINFRRFTSASDV-WMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 239 (270)
T ss_pred ce-ecCCCCccccccChhhhccCCCCchhhh-HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHH
Confidence 21 1222335568999999988889999999 999999999875 6554332211 1122346788999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 948 LALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
++.+|+.++|.+||++.++++.|.+++++
T Consensus 240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 240 LMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999998765
No 184
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.98 E-value=4.7e-32 Score=297.29 Aligned_cols=244 Identities=25% Similarity=0.409 Sum_probs=198.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~ 797 (985)
.++|+..+.||+|+||.||+|... ++..||+|.+..... ....++.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888999999999999999863 467899999875532 2356788999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 001988 798 ALVLEYMSNGSLEDCLHSSN---------------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSN 856 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~N 856 (985)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|| |+++++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l---H~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCeecccccHhh
Confidence 99999999999999987431 2467888899999999999999 78999999999999
Q ss_pred EEEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-ccccc-Ccchh
Q 001988 857 VLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLS-GEEKH 934 (985)
Q Consensus 857 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~-~~~~~ 934 (985)
|++++++.+||+|||+++.+..............+..|+|||.+....++.++|+ |++|+.++++++ +..+. +....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDV-WAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHH-HHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999886543222211222335678999999988999999999 999999999986 43222 11110
Q ss_pred h-----------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 935 F-----------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 935 ~-----------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
. ..++.++.++.+++.+|++.+|.+||++.|+++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 0 1123356789999999999999999999999998863
No 185
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.98 E-value=7.1e-32 Score=291.49 Aligned_cols=240 Identities=23% Similarity=0.400 Sum_probs=193.2
Q ss_pred ceeeccCceeEEEEEEc----CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeee-cCCceEEEEeccC
Q 001988 732 NIIGIGGFGSVYRARLE----DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCS-NDDFKALVLEYMS 805 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 805 (985)
+.||+|+||.||+|... +...||+|.+.... ....+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 34579999986432 234567889999999999999999999875 4556789999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc--
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST-- 883 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-- 883 (985)
+|+|.+++.......++..+..++.|+++|++|| |+.+++||||||+||++++++.+||+|||+++.+.......
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 9999999987655678888899999999999999 78999999999999999999999999999998654322111
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhccc-ccccCcchh------------hhhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK-SLLSGEEKH------------FAAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~~~------------~~~~~~~~~~l~~l~~ 950 (985)
......++..|+|||.+....++.++|+ |++|+++++++++ ..+...... ...++.++..+.+++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 236 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDV-WSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVML 236 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHH
Confidence 1122346778999999988899999999 9999999999885 333221110 1112234678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 951 ECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
+||..+|++||++.|+++.++++..
T Consensus 237 ~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 237 SCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHcCCChhhCCCHHHHHHHHHHHhc
Confidence 9999999999999999999998753
No 186
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.98 E-value=1.4e-31 Score=288.76 Aligned_cols=236 Identities=31% Similarity=0.479 Sum_probs=200.4
Q ss_pred ceeeccCceeEEEEEEcC----CcEEEEEEeccCCcch-HHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLED----GVEIAIKVFHPQCAST-LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~----~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|...+ +..||+|.++...... .+.+.+|++++++++|+|++++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999998753 7889999998664433 67889999999999999999999999999999999999999
Q ss_pred CChHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 807 GSLEDCLHSS--------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 807 gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
++|.+++... ...+++..+.+++.|++.|++|| |+++++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL---ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH---HcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999876 46789999999999999999999 889999999999999999999999999999988754
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhccc-ccccCcchhh------------hhHHHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK-SLLSGEEKHF------------AAKEQCLLSI 945 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~~~~------------~~~~~~~~~l 945 (985)
...........+++.|+|||.+....++.++|+ |++|+++++++++ ..+....... ..+..++.++
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDV-WSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDEL 236 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhcc-HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHH
Confidence 332223344557889999999988899999999 9999999999874 5443322111 1233456889
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
.+++.+|+..+|.+||++.|+++.|+
T Consensus 237 ~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 237 YELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHccCCcccCcCHHHHHHhhC
Confidence 99999999999999999999998763
No 187
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.98 E-value=4.8e-32 Score=293.67 Aligned_cols=243 Identities=26% Similarity=0.338 Sum_probs=203.7
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|+. .+++.||||.+.... .....++.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677889999999999999985 489999999886532 223457889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 802 EYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 802 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
||+++++|.+++.. ....+++...+.++.|++.|++|| |+.|++|+||||+||+++.++.++++|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998864 234688999999999999999999 799999999999999999999999999999887643
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh---------------hhHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQCLL 943 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~ 943 (985)
... ......++..|+|||.+.+..++.++|+ |++|+++++++++..+....... ......++
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDI-WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 235 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhH-HHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccH
Confidence 221 1233468899999999988889999999 99999999999987654322110 01123567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
++.+++.+||..+|.+||||.+|++.++++.
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 8999999999999999999999999998763
No 188
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.98 E-value=9.5e-32 Score=299.59 Aligned_cols=230 Identities=23% Similarity=0.224 Sum_probs=192.2
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~ 801 (985)
+|...+.||+|+||.||+|+.. +++.||+|++.+... .....+..|..++..+ .|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999865 678999999875422 2334567788888877 5899999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.++..++.|++.||+|| |++||+||||||+||++++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 9999999999987654 588999999999999999999 78999999999999999999999999999997643211
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~l~~ 950 (985)
......+||+.|+|||.+....++.++|+ |++|+.++++++|..+......... +...+.++.+++.
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 233 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDW-WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 233 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccch-hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence 12334569999999999999999999999 9999999999999877654322111 1234577899999
Q ss_pred HccCCCCCCCCCH
Q 001988 951 ECTMESPEKRIDA 963 (985)
Q Consensus 951 ~cl~~~P~~RPt~ 963 (985)
+|++.+|.+|+++
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05616 234 GLMTKHPGKRLGC 246 (323)
T ss_pred HHcccCHHhcCCC
Confidence 9999999999985
No 189
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.98 E-value=1.6e-31 Score=287.64 Aligned_cols=236 Identities=28% Similarity=0.393 Sum_probs=196.4
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeee-cCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCS-NDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 804 (985)
++|...+.||+|+||.||+|..+ +..||+|.++.. ...+.+.+|+.++++++|+|++++++++. .++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999875 788999998644 23467889999999999999999999764 556789999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++.... ..+++....+++.|++.||+|| |++|++||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999998653 3478999999999999999999 78999999999999999999999999999988653221
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
....++..|+|||++....++.++|+ |++|++++++++ ++.+....... ..++.++..+.+++.
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 233 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDV-WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMK 233 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhh-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 12235678999999988889999999 999999999986 66543322111 112235678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHHHh
Q 001988 951 ECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+|++.+|++||++.++++.|+++
T Consensus 234 ~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 234 QCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHhcCChhhCcCHHHHHHHHhcC
Confidence 99999999999999999998764
No 190
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-33 Score=303.39 Aligned_cols=235 Identities=23% Similarity=0.318 Sum_probs=204.1
Q ss_pred ccCCceeeccCceeEEEEEEcC-CcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 728 FAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
|.+...+|.|+||.||+|..++ +...|.|++..+.......+.-||+||..+.||+||++++.|...+..+|..|||+|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4455679999999999998763 445688888877777888999999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|-....+-.-+..+++.++.-+++|++.||.|| |+.+|||||+|+-|||++-+|.++|+|||.+.... .......
T Consensus 114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~L---Hs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRD 188 (1187)
T KOG0579|consen 114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWL---HSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRD 188 (1187)
T ss_pred chHhHHHHHhccccchHHHHHHHHHHHHHHHHH---hhcchhhhhccccceEEEecCcEeeecccccccch--hHHhhhc
Confidence 999988888788899999999999999999999 89999999999999999999999999999875432 2333456
Q ss_pred ccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcc--------------hhhhhHHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEE--------------KHFAAKEQCLLSIFS 947 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~l~~ 947 (985)
.+.|||+|||||+++ +.+|.+++|+ |++|+.+.||...+.+.... |..-++..+...+.+
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDi-WSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D 267 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADI-WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD 267 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhH-HhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence 778999999999875 6789999999 99999999999887655433 233355667888999
Q ss_pred HHHHccCCCCCCCCCHHHHHH
Q 001988 948 LALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~ 968 (985)
++.+|+..+|..||++.++++
T Consensus 268 fLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 268 FLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHhcCCccCCCHHHHhh
Confidence 999999999999999999875
No 191
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.98 E-value=1.1e-31 Score=288.73 Aligned_cols=237 Identities=23% Similarity=0.262 Sum_probs=201.7
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|...+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677789999999999999865 7899999998654 233456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++... ...+++..+..++.|++.|+.|| |+.|++||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL---HSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999999875 45788999999999999999999 789999999999999999999999999999987653322
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
......|++.|+|||+...+.++.++|+ |++|+++++++++..+....... ..+...+.++.+++.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDV-WALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLID 234 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccch-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHH
Confidence 1233468899999999999999999999 99999999999988765433211 112245678999999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
+||+.+|++||++.++++.
T Consensus 235 ~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHccCCcccCcCHHHHhhC
Confidence 9999999999999999863
No 192
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.98 E-value=9.2e-32 Score=297.02 Aligned_cols=249 Identities=22% Similarity=0.372 Sum_probs=202.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCc----EEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGV----EIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+...... ...++.+|+.++++++||||++++++|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356778899999999999999864 444 5799988755332 234688999999999999999999998764 467
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+++||+++|+|.+++......+++..+..++.|++.||+|| |+++|+||||||+||++++++.+||+|||+++.+..
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---hhcCeeccccccceeeecCCCceEEccccccccccC
Confidence 89999999999999987766788999999999999999999 789999999999999999999999999999987654
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSI 945 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l 945 (985)
...........++..|+|||.+.+..++.++|+ |++|++++++++ +..+....+.. +.+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di-wslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDV-WSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDV 240 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHH
Confidence 332222233346778999999988999999999 999999999886 44443221110 1112245678
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 946 FSLALECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
.+++.+||..+|++||++.++++.+.++.++..
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 999999999999999999999999999876544
No 193
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.98 E-value=1.4e-31 Score=288.19 Aligned_cols=239 Identities=25% Similarity=0.373 Sum_probs=199.7
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+..... ....+.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46777899999999999999987788999998875432 34678999999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+++|.+++......+++..+..++.|++.|++|| |+.+++||||||+||+++.++.+||+|||.++....... ...
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYL---ESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccccceEEEcCCCeEEECCCcceeecccCcc-ccc
Confidence 9999999987655788999999999999999999 789999999999999999999999999999887542211 111
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh------------hHHHHHHHHHHHHHHc
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~------------~~~~~~~~l~~l~~~c 952 (985)
....++.+|+|||.+..+.++.++|+ |++|+.++++++ +..+........ .+...++.+.+++.+|
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDV-WSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHC 237 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHH-HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHH
Confidence 22335678999999998899999999 999999999987 665543221111 1112467799999999
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITRL 970 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L 970 (985)
|..+|++||++.|+++.|
T Consensus 238 l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 238 WKERPEDRPSFSLLLHQL 255 (256)
T ss_pred cccChhhCCCHHHHHHhh
Confidence 999999999999999886
No 194
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=6e-32 Score=308.51 Aligned_cols=236 Identities=20% Similarity=0.281 Sum_probs=191.8
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.|...+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999864 78899999987542 2234568899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC-
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE- 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 881 (985)
|+++|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~l---H~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999999987653 578888899999999999999 789999999999999999999999999999754321000
Q ss_pred --------------------------------------------cceecccccccccccccccccCccchhhhccccccc
Q 001988 882 --------------------------------------------STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPV 917 (985)
Q Consensus 882 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~ 917 (985)
.......+||+.|+|||++.+..++.++|+ |++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di-wSlGv 236 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW-WSVGV 236 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeE-EechH
Confidence 000123469999999999999999999999 99999
Q ss_pred chhhhcccccccCcchhhh---------------hHHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 001988 918 SLVEVVDKSLLSGEEKHFA---------------AKEQCLLSIFSLALECTMESPEKRID---AKDTIT 968 (985)
Q Consensus 918 ~~~~i~~~~~~~~~~~~~~---------------~~~~~~~~l~~l~~~cl~~~P~~RPt---~~ev~~ 968 (985)
+++++++|..++....... ......++..+++.+++ .+|.+|++ +.|+++
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 9999999987765332111 01123566777787776 49999997 777654
No 195
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=1.2e-31 Score=300.48 Aligned_cols=247 Identities=25% Similarity=0.371 Sum_probs=201.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc--------CCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecC
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE--------DGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSND 794 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~ 794 (985)
..+|.+.+.||+|+||.||+|+.. ++..||+|.++.... ...+++.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 356888999999999999999742 123689998875432 2356789999999999 799999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL 859 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill 859 (985)
+..++||||+++|+|.+++.... ..+++.++..++.|+++||+|| |++|++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEE
Confidence 99999999999999999987531 2478889999999999999999 78999999999999999
Q ss_pred cCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh---
Q 001988 860 DEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF--- 935 (985)
Q Consensus 860 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~--- 935 (985)
++++.+||+|||+++...............++..|+|||.+....++.++|+ |++|++++++++ +..+....+..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV-WSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhh-HHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999999999999987643322222222334578999999999999999999 999999999987 54433221111
Q ss_pred ---------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 936 ---------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 936 ---------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
+.+..++.++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 247 KLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 1122346789999999999999999999999999999874
No 196
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.98 E-value=7.9e-32 Score=290.93 Aligned_cols=243 Identities=27% Similarity=0.455 Sum_probs=204.0
Q ss_pred HhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..++|...+.||+|+||.||+|..++++.||||.+.... ...+++.+|+.++++++|+||+++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 356788999999999999999998888899999987553 3456789999999999999999999999998899999999
Q ss_pred cCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++.... ..+++.++..++.|++.|++|| |+.+++||||||+||++++++.+|++|||.++.+.... .
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~l---h~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYL---ESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-Y 158 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcchheEEEcCCCCEEECccccceeccchh-h
Confidence 99999999998653 4689999999999999999999 78999999999999999999999999999998764321 1
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLA 949 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~ 949 (985)
........+..|+|||.+.+..++.++|+ |++|+.++++++ +..+....... ..+..++.++.+++
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di-~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 237 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDV-WSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLM 237 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 11122234568999999998889999999 999999999997 66654322111 11223467899999
Q ss_pred HHccCCCCCCCCCHHHHHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
.+|+..+|.+||++.++.+.|+.
T Consensus 238 ~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 238 LQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHcccCcccCCCHHHHHHHHhc
Confidence 99999999999999999998874
No 197
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.98 E-value=1.4e-31 Score=288.32 Aligned_cols=235 Identities=23% Similarity=0.351 Sum_probs=196.8
Q ss_pred ceeeccCceeEEEEEEcC--C--cEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLED--G--VEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~--~--~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|.+.+ + ..||+|.+..... ...+.+.+|+.++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998642 2 3699999987755 456788999999999999999999999988 888999999999
Q ss_pred CChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc-e
Q 001988 807 GSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST-M 884 (985)
Q Consensus 807 gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~ 884 (985)
|+|.+++.... ..+++.....++.|++.||+|| |+++++||||||+||+++.++.+||+|||+++.+....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL---ESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH---HhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999998764 5689999999999999999999 78999999999999999999999999999998875432221 1
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh-------------hhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-------------~~~~~~~~~l~~l~~ 950 (985)
.....++..|+|||.+....++.++|+ |++|++++++++ |..+....... ..++..+..+.+++.
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di-~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDV-WMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVML 235 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhh-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHH
Confidence 223457789999999998899999999 999999999997 66654221111 112235678999999
Q ss_pred HccCCCCCCCCCHHHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L~ 971 (985)
+|++.+|++||++.|+++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999875
No 198
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.98 E-value=1.4e-31 Score=294.18 Aligned_cols=238 Identities=24% Similarity=0.314 Sum_probs=200.3
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
.+.|+..+.||+|+||.||+|+.. +++.||+|.+..........+.+|++++++++||||+++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 367888899999999999999875 6889999999876555667889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|..++......+++..+..++.|++.|++|| |+.+++||||||+||+++.++.+||+|||++...... ..
T Consensus 91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~ 165 (292)
T cd06644 91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYL---HSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQ 165 (292)
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hcCCeeecCCCcceEEEcCCCCEEEccCccceecccc--cc
Confidence 999999998876656789999999999999999999 8899999999999999999999999999998764322 11
Q ss_pred eecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchhh--------------hhHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQCLLS 944 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~~~~ 944 (985)
......+++.|+|||.+. ...++.++|+ |++|+.+++++++..+....... ..+..++.+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI-WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSME 244 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhh-HhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHH
Confidence 123345888999999884 3456778999 99999999999988765432110 112234567
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 001988 945 IFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+.+++.+||+.+|++||++.|+++
T Consensus 245 ~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 245 FRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhc
Confidence 899999999999999999999976
No 199
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.98 E-value=6.8e-32 Score=301.05 Aligned_cols=231 Identities=28% Similarity=0.276 Sum_probs=187.8
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHH-HHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECE-VIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~-il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 67889999987542 122234444444 56778999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+.+.....++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~ 154 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTS 154 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CCcc
Confidence 99999997654 567888888999999999999 78999999999999999999999999999997643222 1233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||++.+..++.++|+ |++|+.+++++++..++....... .....+..+.+++.+|++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDW-WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQK 233 (325)
T ss_pred cccCCccccCHHHHcCCCCCCcccc-ccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHccc
Confidence 4569999999999999999999999 999999999999987654332111 1123567789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 001988 956 SPEKRIDAKDTITR 969 (985)
Q Consensus 956 ~P~~RPt~~ev~~~ 969 (985)
+|.+||++.+.+..
T Consensus 234 ~p~~R~~~~~~~~~ 247 (325)
T cd05602 234 DRTKRLGAKDDFME 247 (325)
T ss_pred CHHHCCCCCCCHHH
Confidence 99999998754443
No 200
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=1.1e-31 Score=293.46 Aligned_cols=236 Identities=22% Similarity=0.318 Sum_probs=197.8
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
|+..+.||+|+||.||+|... ++..+|+|.+..........+.+|+++++.++|||++++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999865 6788999998766555567788999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
++|..++......+++..+..++.|+++||+|| |+.|++||||||+||+++.++.+||+|||++....... ....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~L---H~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~ 161 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYL---HENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRD 161 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEccCCCEEEccccccccccccc--cccc
Confidence 999998876555789999999999999999999 78999999999999999999999999999987653221 1223
Q ss_pred ccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchhh--------------hhHHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQCLLSIFS 947 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~~~~l~~ 947 (985)
...+++.|+|||.+. ...++.++|+ |++|+++++++++..+....... ..+..++.++.+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv-~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADV-WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKD 240 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchh-hhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHH
Confidence 456899999999874 4557788999 99999999999988665432111 112235678999
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 001988 948 LALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++.+||+.+|.+||++.++++.
T Consensus 241 li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 241 FLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999998754
No 201
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.1e-31 Score=295.11 Aligned_cols=236 Identities=25% Similarity=0.327 Sum_probs=201.4
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.+|...+.||+|+||.||+|.. .+++.||+|.+..........+.+|+.++++++|||++++++++....+.++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4688889999999999999985 478999999998765556677899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... .+++.++..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||++........ .
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~L---H~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~ 172 (296)
T cd06654 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 172 (296)
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--c
Confidence 999999998754 478899999999999999999 789999999999999999999999999999876532221 1
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh--------------hhhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------------FAAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------------~~~~~~~~~~l~~l~~ 950 (985)
.....+++.|+|||.+.+..++.++|+ |++|+.++++++++.++..... ...++..+..+.+++.
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 251 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDI-WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchH-HHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHH
Confidence 223468899999999988889999999 9999999999998876533211 0112345577899999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
+||.++|++||++.|+++.
T Consensus 252 ~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 252 RCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHCcCCcccCcCHHHHhhC
Confidence 9999999999999999873
No 202
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=1.2e-31 Score=290.80 Aligned_cols=241 Identities=29% Similarity=0.359 Sum_probs=199.3
Q ss_pred HHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
+.+++++.....||+|+||.||+|... +++.||+|.+........+.+.+|++++++++|+||+++++++..++..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 345666777789999999999999854 6788999998876656667899999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-CCcEEEecccCceecc
Q 001988 801 LEYMSNGSLEDCLHSSNCAL--NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLS 877 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~--~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-~~~~kl~DfGla~~~~ 877 (985)
|||+++++|.+++......+ ++..+..++.|++.|++|| |++||+||||||+||+++. ++.+||+|||.+..+.
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYL---HDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 99999999999998754445 7888889999999999999 7899999999999999976 6799999999988764
Q ss_pred CCCCcceecccccccccccccccccCc--cchhhhcccccccchhhhcccccccCcchhh--------------hhHHHH
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFVGE--LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQC 941 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~ 941 (985)
.... ......+++.|+|||.+.... ++.++|+ |++|+++++++++..+....... ..+..+
T Consensus 161 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv-~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06624 161 GINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADI-WSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESL 237 (268)
T ss_pred cCCC--ccccCCCCccccChhhhccccccCCchhhh-HHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCccc
Confidence 3221 122335889999999986544 6789999 99999999999987664322110 112235
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 942 LLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+++.+++.+||..+|++||++.|+++
T Consensus 238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 238 SAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 577899999999999999999999875
No 203
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=1.6e-31 Score=290.51 Aligned_cols=228 Identities=21% Similarity=0.331 Sum_probs=183.5
Q ss_pred eeeccCceeEEEEEEc-------------------------CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeE
Q 001988 733 IIGIGGFGSVYRARLE-------------------------DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKI 787 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~-------------------------~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l 787 (985)
.||+|+||.||+|... ....||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5899999999999742 123589999876544445678889999999999999999
Q ss_pred EeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC----
Q 001988 788 ISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM---- 863 (985)
Q Consensus 788 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~---- 863 (985)
++++.+....++||||+++|+|..++......+++..+.+++.|+++||+|| |+++|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYL---EDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999987666789999999999999999999 789999999999999997654
Q ss_pred ---cEEEecccCceeccCCCCcceeccccccccccccccccc-Cccchhhhcccccccchhhhc-ccccccCcchhhh--
Q 001988 864 ---VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVV-DKSLLSGEEKHFA-- 936 (985)
Q Consensus 864 ---~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~-~~~~~~~~~~~~~-- 936 (985)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|+ |++|+.+++++ ++..+........
T Consensus 159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv-~slG~~l~el~~~g~~p~~~~~~~~~~ 231 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADK-WSFGTTLLEICFDGEVPLKERTPSEKE 231 (274)
T ss_pred ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHH-HHHHHHHHHHHhCCCCCccccChHHHH
Confidence 4899999987654211 12347788999998865 567899999 99999999984 5554432211110
Q ss_pred --------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 937 --------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 937 --------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
.++....++.+++.+||..+|++||++.++++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 232 RFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 0111235689999999999999999999999876
No 204
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=1.9e-31 Score=298.02 Aligned_cols=239 Identities=21% Similarity=0.241 Sum_probs=194.4
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|+.. +++.||+|++.+. .....+.+.+|+.+++.++|+||+++++++.++++.++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999865 6889999998742 1223456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++......+++..+..++.||+.||+|| |+++|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSV---HQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999999987656788999999999999999999 899999999999999999999999999999977643222
Q ss_pred cceeccccccccccccccccc-----CccchhhhcccccccchhhhcccccccCcchhhh----------------hHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFV-----GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------AKEQ 940 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------~~~~ 940 (985)
.......||+.|+|||++.. +.++.++|+ |++|++++++++|..+........ ....
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Di-wslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 235 (331)
T cd05597 158 -VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDW-WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTD 235 (331)
T ss_pred -ccccceeccccccCHHHHhhccccccCCCCccee-ehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCC
Confidence 11223469999999999863 456788999 999999999999887654321110 1112
Q ss_pred HHHHHHHHHHHccCCCC--CCCCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESP--EKRIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P--~~RPt~~ev~~~ 969 (985)
.++++.+++++|+..++ ..||++.+++..
T Consensus 236 ~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 236 VSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 46778889998775533 347899888765
No 205
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=1e-31 Score=299.13 Aligned_cols=226 Identities=26% Similarity=0.275 Sum_probs=185.0
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHH-HHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECE-VIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~-il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|++.+... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 688999999875421 22344555554 57888999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++.... .+++.....++.||++||+|| |+.||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYL---HSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTS 154 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cccc
Confidence 99998887643 578888899999999999999 78999999999999999999999999999987532221 2233
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~ 955 (985)
..+||+.|+|||.+.+..++.++|+ |++|++++++++|..+........ .+.....++.+++.+|++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDW-WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHK 233 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcc-cccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccC
Confidence 4569999999999998889999999 999999999999987654332111 1122456788999999999
Q ss_pred CCCCCCCHH
Q 001988 956 SPEKRIDAK 964 (985)
Q Consensus 956 ~P~~RPt~~ 964 (985)
+|.+||++.
T Consensus 234 ~p~~R~~~~ 242 (321)
T cd05603 234 DQRRRLGAK 242 (321)
T ss_pred CHhhcCCCC
Confidence 999999764
No 206
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=2.7e-31 Score=287.15 Aligned_cols=239 Identities=25% Similarity=0.330 Sum_probs=200.1
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-----chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-----STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
++|...+.||+|+||.||+|... ++++||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57888999999999999999864 789999999865422 123568899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||+++++|.+++.... .+++....+++.|++.|++|| |+.|++||||||+||++++++.++|+|||+++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999999999987654 578889999999999999999 7899999999999999999999999999999875432
Q ss_pred CCcce-ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh-------------hhHHHHHHHH
Q 001988 880 DESTM-RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------AAKEQCLLSI 945 (985)
Q Consensus 880 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------~~~~~~~~~l 945 (985)
..... .....++..|+|||.+.+..++.++|+ |++|++++++++++.+....... ..++.++..+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADV-WSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDA 236 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhh-HHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHH
Confidence 21111 123457889999999999989999999 99999999999988765332111 1123456789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+++.+||..+|.+||++.|+++.
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 237 RNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHhhcCcccCCCHHHHhhC
Confidence 999999999999999999999863
No 207
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.3e-31 Score=304.66 Aligned_cols=236 Identities=23% Similarity=0.324 Sum_probs=192.7
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-----ceE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD-----FKA 798 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~-----~~~ 798 (985)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ +.+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999864 78999999986542 223467889999999999999999999998776 789
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+||||++ ++|.+.+... ..+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYL---HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999996 5888887654 3688999999999999999999 789999999999999999999999999999987542
Q ss_pred CCCcceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhh--------------------
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-------------------- 937 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-------------------- 937 (985)
... .......+++.|+|||.+.+. .++.++|+ |++|++++++++|+.++........
T Consensus 156 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 156 DES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDI-WSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred Ccc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHH-HhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 221 222334688999999998764 47889999 9999999999998875532211000
Q ss_pred -----------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 -----------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 -----------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.....+++.+++.+|+..||++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 01124568899999999999999999999864
No 208
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=9e-32 Score=309.18 Aligned_cols=234 Identities=18% Similarity=0.177 Sum_probs=191.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..+|...+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|+|||++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 346888999999999999999875 678899996432 3457899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+ .++|.+++......+++.++..++.|++.||+|| |++||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 242 ~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 242 Y-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYI---HGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 9 4799998877655799999999999999999999 78999999999999999999999999999998765433322
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhccccc--ccCcc-----hhhh--------------------
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL--LSGEE-----KHFA-------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~--~~~~~-----~~~~-------------------- 936 (985)
......||+.|+|||++.+..++.++|+ |++|++++|++.+.. +.... +...
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDv-wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDI-WSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHH-HHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 3334579999999999999999999999 999999999876432 11100 0000
Q ss_pred --------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 --------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 --------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
........+.+++.+|++.||.+||++.|+++.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000112367889999999999999999999863
No 209
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=9.9e-32 Score=298.46 Aligned_cols=233 Identities=22% Similarity=0.309 Sum_probs=195.9
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcchHHHHHHHHHHHHhcC-C-----CCeeeEEeeeecCCceE
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-H-----RNLVKIISSCSNDDFKA 798 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-h-----~niv~l~~~~~~~~~~~ 798 (985)
.+|.+.+.||+|+||.|.+|.. ++++.||||+++.+ .....+...|+.+|..++ | -|+|++++++..+++.|
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 3789999999999999999985 47999999999865 344567789999999996 3 48999999999999999
Q ss_pred EEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC--cEEEecccCcee
Q 001988 799 LVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM--VAHLSDFGMAKL 875 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~--~~kl~DfGla~~ 875 (985)
||+|.+ .-+|.++++.+ ...++...++.|+.||+.||.+| |+.+||||||||+|||+.+.+ .+||+|||.|+.
T Consensus 265 iVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L---~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 265 IVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFL---HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999999 45999999987 34689999999999999999999 899999999999999996543 799999999987
Q ss_pred ccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-------------------
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------- 936 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------- 936 (985)
..... . ..+-+..|+|||++.+.+|+.+.|+ |++||++.|+++|..++......+
T Consensus 341 ~~q~v----y-tYiQSRfYRAPEVILGlpY~~~IDm-WSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 341 ESQRV----Y-TYIQSRFYRAPEVILGLPYDTAIDM-WSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred cCCcc----e-eeeeccccccchhhccCCCCCccce-eehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 53211 1 4567889999999999999999999 999999999999876544331110
Q ss_pred --------------------------------------------hH----------H-HHHHHHHHHHHHccCCCCCCCC
Q 001988 937 --------------------------------------------AK----------E-QCLLSIFSLALECTMESPEKRI 961 (985)
Q Consensus 937 --------------------------------------------~~----------~-~~~~~l~~l~~~cl~~~P~~RP 961 (985)
.+ + .....+.+++++|+.+||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 00 0 1245689999999999999999
Q ss_pred CHHHHHHH
Q 001988 962 DAKDTITR 969 (985)
Q Consensus 962 t~~ev~~~ 969 (985)
|+.++++.
T Consensus 495 tp~qal~H 502 (586)
T KOG0667|consen 495 TPAQALNH 502 (586)
T ss_pred CHHHHhcC
Confidence 99998864
No 210
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=2.3e-31 Score=287.38 Aligned_cols=237 Identities=27% Similarity=0.359 Sum_probs=202.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
++|...+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888899999999999999864 67889999998765556678999999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++......+++..+..++.|++.|++|| |+.+++||||||+||++++++.+||+|||.+..+.... ..
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~ 157 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYL---HETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--AK 157 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HhCCceecCCChhhEEECCCCCEEECccccchhhhhhh--hc
Confidence 99999999987655789999999999999999999 78999999999999999999999999999988754221 12
Q ss_pred ecccccccccccccccccC---ccchhhhcccccccchhhhcccccccCcchhh----------------hhHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVG---ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----------------AAKEQCLLSI 945 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~---~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----------------~~~~~~~~~l 945 (985)
.....++..|+|||.+... .++.++|+ |++|+.+++++++..+....... ......+.++
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di-~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDI-WALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVF 236 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhh-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHH
Confidence 2334688899999998776 88899999 99999999999988765432100 1123346779
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+++.+||..+|.+||++.+++.
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 237 HDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 99999999999999999999875
No 211
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.4e-31 Score=298.08 Aligned_cols=230 Identities=22% Similarity=0.215 Sum_probs=191.5
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (985)
+|...+.||+|+||.||+|+.. +++.||+|++.+.. ......+..|.++++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999865 78999999987542 223456778999998886 577888999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.++..++.|++.||+|| |++||+||||||+||++++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~l---H~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFL---HRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999999999987654 688999999999999999999 78999999999999999999999999999987643222
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~ 950 (985)
.......||+.|+|||.+.+..++.++|+ |++|++++++++|..+........ .+...+.++.+++.
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDW-WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICK 233 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccch-hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 12334569999999999998899999999 999999999999988765432211 12234667889999
Q ss_pred HccCCCCCCCCCH
Q 001988 951 ECTMESPEKRIDA 963 (985)
Q Consensus 951 ~cl~~~P~~RPt~ 963 (985)
+|+..+|.+|++.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05615 234 GLMTKHPSKRLGC 246 (323)
T ss_pred HHcccCHhhCCCC
Confidence 9999999999975
No 212
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=1.9e-31 Score=301.80 Aligned_cols=237 Identities=22% Similarity=0.276 Sum_probs=192.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ......+++|++++.+++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999865 78999999987532 223456788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++...+ .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~l---H~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAI---HQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999999997654 688999999999999999999 799999999999999999999999999999875432110
Q ss_pred c---------------------------------ceecccccccccccccccccCccchhhhcccccccchhhhcccccc
Q 001988 882 S---------------------------------TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLL 928 (985)
Q Consensus 882 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~ 928 (985)
. ......+||+.|+|||++.+..++.++|+ |++|++++++++|..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Di-wSlGvilyel~tG~~P 235 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDW-WSLGVIMYEMLIGYPP 235 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCccee-ccccceeeecccCCCC
Confidence 0 00123469999999999999999999999 9999999999998876
Q ss_pred cCcchhhhh-------------HH--HHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 001988 929 SGEEKHFAA-------------KE--QCLLSIFSLALECTMESPEKRID---AKDTIT 968 (985)
Q Consensus 929 ~~~~~~~~~-------------~~--~~~~~l~~l~~~cl~~~P~~RPt---~~ev~~ 968 (985)
......... +. ..+++..+++.+|+ .+|.+|++ +.|+.+
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 236 FCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 543221110 00 13456788888877 49999986 455544
No 213
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=7.9e-32 Score=294.21 Aligned_cols=239 Identities=23% Similarity=0.333 Sum_probs=202.1
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
.++|.+.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888899999999999999864 6889999999766555667889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|.+++...+..+++.....++.|++.|+.|| |+.+|+||||||+||+++.++.++|+|||++....... .
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~ 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFL---HSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--Q 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc--c
Confidence 999999999987666789999999999999999999 78999999999999999999999999999987653222 1
Q ss_pred eecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchh--------------hhhHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------------FAAKEQCLLS 944 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------------~~~~~~~~~~ 944 (985)
......+++.|+|||.+. ...++.++|+ |++|+.++++++++.+...... ...+..++.+
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADI-WSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSS 237 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccH-HHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHH
Confidence 223446899999999875 3446778999 9999999999998876543211 1122345678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 945 IFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+.+++.+||..+|.+||++.++++.
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhcC
Confidence 9999999999999999999999865
No 214
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=2.9e-31 Score=287.91 Aligned_cols=235 Identities=22% Similarity=0.278 Sum_probs=186.1
Q ss_pred ceeeccCceeEEEEEEc---CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 732 NIIGIGGFGSVYRARLE---DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
+.||+|+||.||+|... ++..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 35899999999999864 346799998876533 23457889999999999999999999999999999999999999
Q ss_pred ChHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 808 SLEDCLHSSN----CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 808 sL~~~l~~~~----~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+|.+++.... ...++....+++.|++.|++|| |+.+++||||||+||+++.++.+||+|||.++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL---HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997532 2456778888999999999999 78999999999999999999999999999997653322222
Q ss_pred eecccccccccccccccccC-------ccchhhhcccccccchhhhcc-cccccCcchhhhh-----------------H
Q 001988 884 MRTQTLATIGYMAPDEIFVG-------ELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFAA-----------------K 938 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~~-----------------~ 938 (985)
......++..|+|||.+... .++.++|+ |++|+.++++++ +..+......... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di-wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNV-WSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLK 236 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchh-HHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccC
Confidence 22334578889999987542 35678899 999999999985 7655432211100 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 939 ~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
....+.+.+++..|| .+|++||++.|+++.|.
T Consensus 237 ~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 237 LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 123466888999999 68999999999998864
No 215
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=3e-31 Score=286.18 Aligned_cols=242 Identities=24% Similarity=0.431 Sum_probs=201.3
Q ss_pred HhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..++|+..+.||+|+||.||+|...++..||+|.+... ....+.+.+|++++++++|+||+++++++.+ ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 34678899999999999999999877888999988754 2345678899999999999999999999887 778999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++... ....++..+..++.|++.||+|| |+.|++||||||+||+++.++.+||+|||.+..+.....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 9999999999764 44578889999999999999999 789999999999999999999999999999987643221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLA 949 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~ 949 (985)
.......++..|+|||.+..+.++.++|+ |++|+.++++++ +..+....... +.....+.++.+++
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di-~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 236 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDV-WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM 236 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccc-hHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHH
Confidence 12222345678999999988889999999 999999999997 66654322111 11223457899999
Q ss_pred HHccCCCCCCCCCHHHHHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
.+|+..+|++||++.++.+.|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 237 MRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999998874
No 216
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=1.8e-31 Score=302.27 Aligned_cols=244 Identities=19% Similarity=0.218 Sum_probs=198.0
Q ss_pred HHHHHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC
Q 001988 719 FELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSND 794 (985)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~ 794 (985)
.++....++|...+.||+|+||.||+|+.+ +++.||+|++.+.. ......+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344456689999999999999999999875 78899999986431 22345578899999999999999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
+..++||||+++|+|.+++... .++......++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 9999999999999999998754 478888899999999999999 79999999999999999999999999999998
Q ss_pred eccCCCCcceecccccccccccccccccC----ccchhhhcccccccchhhhcccccccCcchhh---------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVG----ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------- 935 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------- 935 (985)
....... ......+||+.|+|||.+... .++.++|+ |++|++++++++|..+.......
T Consensus 191 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~Di-wSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (371)
T cd05622 191 KMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW-WSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF 268 (371)
T ss_pred EcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccce-eehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC
Confidence 7643221 122345799999999998653 37788999 99999999999998766543211
Q ss_pred hhHHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001988 936 AAKEQCLLSIFSLALECTMESPEK--RIDAKDTITR 969 (985)
Q Consensus 936 ~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~ev~~~ 969 (985)
+.....+.++.+++..|+...+.+ ||++.|+.+.
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 111235677889999999844433 7788888874
No 217
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2e-31 Score=293.31 Aligned_cols=235 Identities=25% Similarity=0.329 Sum_probs=201.6
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.+|...+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..+++.++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 6788899999999999999986 479999999998665556677889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... .+++.++..++.|++.||.|| |+.|++||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~L---H~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--~ 171 (297)
T cd06656 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALDFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 171 (297)
T ss_pred CCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--C
Confidence 999999998754 478889999999999999999 789999999999999999999999999999887543221 1
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch--------------hhhhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK--------------HFAAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~l~~l~~ 950 (985)
.....+++.|+|||.+.+..++.++|+ |++|+.+++++++..+..... ....+...+..+.+++.
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 250 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDI-WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLN 250 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHH
Confidence 223468899999999999889999999 999999999999887543211 11123345677899999
Q ss_pred HccCCCCCCCCCHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~ 968 (985)
+||..+|++||++.++++
T Consensus 251 ~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 251 RCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999987
No 218
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=2.9e-31 Score=300.38 Aligned_cols=235 Identities=23% Similarity=0.295 Sum_probs=191.9
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-----
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD----- 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~----- 795 (985)
..++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999864 78999999997542 233567789999999999999999999986543
Q ss_pred -ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 796 -FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 796 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~L---H~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 46899999965 67666643 467888899999999999999 78999999999999999999999999999997
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------- 937 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------- 937 (985)
..... .......||+.|+|||.+.+..++.++|+ |++|++++++++|..++........
T Consensus 172 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~Di-wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 172 TACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDI-WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccC---ccCCCCcccCCCCCchhccCCCCCcchhh-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 64321 12234568999999999999999999999 9999999999998876543211000
Q ss_pred ------------------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 ------------------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 ------------------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.....+++.+++.+|+..||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00013567899999999999999999999874
No 219
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=3.9e-31 Score=284.77 Aligned_cols=237 Identities=27% Similarity=0.372 Sum_probs=194.7
Q ss_pred ceeeccCceeEEEEEEc-C---CcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-D---GVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~---~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
++||+|+||.||+|.+. . +..||+|.+..... ...+++.+|+.+++++.||||+++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 46999999999999753 2 26899999886643 245678999999999999999999998864 467999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce-e
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM-R 885 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~-~ 885 (985)
|+|.+++.... .+++..+..++.|+++|++|| |+.+++||||||+||+++.++.+||+|||+++.+........ .
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYL---ESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHH---hhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998765 689999999999999999999 789999999999999999999999999999987643332111 1
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHHHHHc
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSLALEC 952 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l~~~c 952 (985)
....++..|+|||.+....++.++|+ |++|+.++++++ +..+....... ..+..++..+.+++.+|
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 234 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDV-WSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSC 234 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchH-HHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence 11223567999999998999999999 999999999997 66654332111 12234567899999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhH
Q 001988 953 TMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L~~i~ 974 (985)
|..+|++||++.++++.|+++.
T Consensus 235 l~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 235 WKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred hcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999998764
No 220
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=9e-32 Score=289.89 Aligned_cols=229 Identities=22% Similarity=0.280 Sum_probs=187.6
Q ss_pred ceeeccCceeEEEEEEc-C-------CcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 732 NIIGIGGFGSVYRARLE-D-------GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~-------~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+.||+|+||.||+|... + ..+||+|.+........+.+..|+.+++++.||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 46899999999999764 2 234888888655444556788999999999999999999999998999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc--------EEEecccCcee
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV--------AHLSDFGMAKL 875 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~--------~kl~DfGla~~ 875 (985)
+++|+|.++++..+..+++..+.+++.|++.|++|| |++||+||||||+||+++.++. ++++|||.+..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFL---EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 999999999987766789999999999999999999 7999999999999999987765 69999998876
Q ss_pred ccCCCCcceeccccccccccccccccc-Cccchhhhcccccccchhhhcccc-cccCcchhhh----------hHHHHHH
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKS-LLSGEEKHFA----------AKEQCLL 943 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~-~~~~~~~~~~----------~~~~~~~ 943 (985)
... .....+++.|+|||.+.+ ..++.++|+ |++|+.+++++++. .+........ .+.....
T Consensus 158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (258)
T cd05078 158 VLP------KEILLERIPWVPPECIENPQNLSLAADK-WSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWT 230 (258)
T ss_pred cCC------chhccccCCccCchhccCCCCCCchhhH-HHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcH
Confidence 432 122458889999999876 457889999 99999999999974 3322211110 0111336
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
++.+++.+||+.+|++||+++++++.|
T Consensus 231 ~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 231 ELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 789999999999999999999999876
No 221
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=3.3e-31 Score=296.06 Aligned_cols=239 Identities=19% Similarity=0.231 Sum_probs=194.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+++.. +++.||+|++.+.. ......+.+|+.++..++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47888999999999999999865 68889999986531 223445788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||++||+|.+++......+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~l---H~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSI---HQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999999987555788999999999999999999 789999999999999999999999999999987643222
Q ss_pred cceeccccccccccccccccc-----CccchhhhcccccccchhhhcccccccCcchhhh----------------hHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFV-----GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------AKEQ 940 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------~~~~ 940 (985)
.......||+.|+|||++.+ +.++.++|+ |++|++++++++|..+........ ....
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Di-wSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 235 (331)
T cd05624 158 -VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDW-WSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITD 235 (331)
T ss_pred -eeeccccCCcccCCHHHHhccccCCCCCCCcccE-EeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCcccc
Confidence 12233569999999998865 567888999 999999999999987654321110 1122
Q ss_pred HHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEK--RIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~--RPt~~ev~~~ 969 (985)
.++++.+++.+|+..++.+ |+++.++.+.
T Consensus 236 ~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 236 VSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 4678899999998865544 4678777653
No 222
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=2.6e-31 Score=288.44 Aligned_cols=236 Identities=26% Similarity=0.423 Sum_probs=191.1
Q ss_pred ceeeccCceeEEEEEEc-CCc--EEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGV--EIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~--~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|... ++. .+|+|.++... ......+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999875 443 47888887543 23446788999999999 799999999999999999999999999
Q ss_pred CChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEeccc
Q 001988 807 GSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFG 871 (985)
Q Consensus 807 gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfG 871 (985)
|+|.+++.... ..+++.++..++.|++.|++|| |++|++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999987532 2478899999999999999999 78999999999999999999999999999
Q ss_pred CceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhH
Q 001988 872 MAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAK 938 (985)
Q Consensus 872 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~ 938 (985)
++.... ..........+..|+|||.+....++.+.|+ |++|+.++++++ +..+...... .+.+
T Consensus 158 l~~~~~---~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di-~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 233 (270)
T cd05047 158 LSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDV-WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 233 (270)
T ss_pred Cccccc---hhhhccCCCCccccCChHHHccCCCCchhhH-HHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCC
Confidence 986421 1111111234567999999988889999999 999999999986 6554322110 1112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 939 EQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 939 ~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
..++.++.+++.+||..+|.+||++.|++..|.++.
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 234 LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 234577999999999999999999999999998764
No 223
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=1.4e-31 Score=298.43 Aligned_cols=226 Identities=23% Similarity=0.249 Sum_probs=188.3
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|+.. +++.||+|++++... ...+.+.+|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 678999999986522 2345678999999888 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFL---HERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTS 154 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Ccee
Confidence 99999887653 689999999999999999999 78999999999999999999999999999987532222 1223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh---h---------------hhHHHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH---F---------------AAKEQCLLSIFSL 948 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~---~---------------~~~~~~~~~l~~l 948 (985)
..+||+.|+|||.+.+..++.++|+ |++|++++++++|..+...... . ..+...+..+.++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~Di-wslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l 233 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDW-WALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHV 233 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchhee-ehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 4579999999999999999999999 9999999999999877632110 0 0112235678899
Q ss_pred HHHccCCCCCCCCCHH
Q 001988 949 ALECTMESPEKRIDAK 964 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ 964 (985)
+.+|+..||++||++.
T Consensus 234 i~~~L~~dP~~R~~~~ 249 (327)
T cd05617 234 LKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHhccCHHHcCCCC
Confidence 9999999999999853
No 224
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=2.2e-31 Score=307.70 Aligned_cols=233 Identities=23% Similarity=0.320 Sum_probs=186.1
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecC--------C
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSND--------D 795 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--------~ 795 (985)
.++|...+.||+|+||.||+|... +++.||||++.... ....+|+.++++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999864 78899999886432 2345799999999999999998876432 2
Q ss_pred ceEEEEeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-cEEEeccc
Q 001988 796 FKALVLEYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFG 871 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-~~kl~DfG 871 (985)
..++||||+++ ++.+++.. ....+++.....++.|++.||+|| |+++|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL---H~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI---HSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46789999975 77776653 345688999999999999999999 789999999999999999665 79999999
Q ss_pred CceeccCCCCcceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhh-------------
Q 001988 872 MAKLLSGEDESTMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------- 937 (985)
Q Consensus 872 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------- 937 (985)
+|+.+..... .....||+.|+|||.+.+. .++.++|+ |++|++++++++|..++........
T Consensus 217 la~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di-wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDL-WSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 9987643221 2235689999999988754 68999999 9999999999998866543211000
Q ss_pred ---------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 ---------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 ---------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+...++++.+++.+||.+||.+||++.|+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 01134678999999999999999999998843
No 225
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=1.7e-31 Score=288.14 Aligned_cols=234 Identities=29% Similarity=0.437 Sum_probs=196.1
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHH--HHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLK--SFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
|+..+.||+|+||.||+|+.. +++.||+|.+......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567789999999999999976 5678999999877443322 3456999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... ..+++..+..++.|+++||++| |+.+|+||||||+||++++++.++|+|||.+.... .....
T Consensus 81 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~L---h~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYL---HSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNEN 154 (260)
T ss_dssp TTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHH---HHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTSE
T ss_pred cccccccccccc-cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc--ccccc
Confidence 999999999833 3679999999999999999999 67899999999999999999999999999998652 22223
Q ss_pred ecccccccccccccccc-cCccchhhhcccccccchhhhcccccccCcch---hhhhH---------H------HHHHHH
Q 001988 885 RTQTLATIGYMAPDEIF-VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---HFAAK---------E------QCLLSI 945 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~-~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~---~~~~~---------~------~~~~~l 945 (985)
.....++..|+|||.+. ...++.++|+ |++|+.+++++++..+..... ..... . ....++
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di-~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDI-WSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEEL 233 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHH-HHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred cccccccccccccccccccccccccccc-cccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHH
Confidence 44566899999999988 8889999999 999999999999887665431 11000 0 013789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+++.+|++.+|++||++.++++
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 99999999999999999999875
No 226
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=1.9e-31 Score=289.78 Aligned_cols=239 Identities=23% Similarity=0.321 Sum_probs=196.4
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecC------
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSND------ 794 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~------ 794 (985)
.+++.|...+.||+|+||.||+|... +++.||+|.+.... .....+..|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677888899999999999999865 68889999987543 3446788999999998 699999999998653
Q ss_pred CceEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCc
Q 001988 795 DFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla 873 (985)
...++||||+++|+|.+++... ...+++..+..++.|++.|++|| |+++|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~L---H~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 4578999999999999998864 34688999999999999999999 7889999999999999999999999999999
Q ss_pred eeccCCCCcceecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchhhh------------
Q 001988 874 KLLSGEDESTMRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------ 936 (985)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------ 936 (985)
....... .......|++.|+|||++. +..++.++|+ |++|+++++++++..+........
T Consensus 159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv-~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd06637 159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDL-WSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR 235 (272)
T ss_pred eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhH-HHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCC
Confidence 8754222 1223456899999999886 3457889999 999999999999887654321110
Q ss_pred -hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....++.++.+++.+||..+|.+||++.|+++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 236 LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11234578999999999999999999999875
No 227
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.4e-31 Score=290.11 Aligned_cols=236 Identities=24% Similarity=0.311 Sum_probs=196.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
++|...+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777788999999999999864 78899999987665455567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++...+ .+++.+...++.|++.|++|| |+.|++||||||+||+++.++.+||+|||++....... ..
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--~~ 162 (267)
T cd06645 89 GGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYL---HSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--AK 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--cc
Confidence 9999999987654 688999999999999999999 78899999999999999999999999999987764221 12
Q ss_pred ecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcchhh----------------hhHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----------------AAKEQCLLSI 945 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----------------~~~~~~~~~l 945 (985)
.....|++.|+|||.+. .+.++.++|+ |++|+.+++++++..+....... .....++..+
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv-wSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDI-WAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSF 241 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhh-HHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHH
Confidence 23446899999999874 4567889999 99999999999987653221100 0011244678
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+++.+|+..+|++||++.++++
T Consensus 242 ~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 242 HHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHccCCchhCcCHHHHhc
Confidence 89999999999999999999875
No 228
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=2.6e-31 Score=289.82 Aligned_cols=231 Identities=22% Similarity=0.302 Sum_probs=193.6
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577889999999999999985 478899999987553 23346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|..+. .+++.....++.|++.|++|| |+.||+||||||+||+++.++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 9999997652 357888899999999999999 7899999999999999999999999999999876422
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------hh--------------HHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------AA--------------KEQCLL 943 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------~~--------------~~~~~~ 943 (985)
......++..|+|||.+.+..++.++|+ |++|+.++++++|..++...... .. ....+.
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDV-WSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSE 227 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchH-HHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCH
Confidence 1233568999999999999999999999 99999999999988765321100 00 012346
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++.+++.+|+..+|++||++.|+++.
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 78999999999999999999999765
No 229
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=2.8e-31 Score=285.69 Aligned_cols=235 Identities=27% Similarity=0.348 Sum_probs=201.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
++|...+.||+|+||.||+|... +++.||+|.+..... .+++.+|++++++++||||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57888899999999999999976 478999999875532 678999999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++......+++.....++.|++.|+.|| |+.+++||||+|+||++++++.+||+|||++........ .
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~ 155 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYL---HSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--K 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--c
Confidence 99999999987666789999999999999999999 788999999999999999999999999999887643221 2
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh--------------hhhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------------FAAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------------~~~~~~~~~~l~~l~~ 950 (985)
.....++..|+|||.+.+..++.++|+ |++|+.+++++++..+...... ...+.....++.+++.
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di-~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADI-WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVK 234 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhH-HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHH
Confidence 233458889999999998899999999 9999999999998875443211 1122334567999999
Q ss_pred HccCCCCCCCCCHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~ 968 (985)
+||+.+|++||++.|+++
T Consensus 235 ~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 235 KCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHhcChhhCcCHHHHhc
Confidence 999999999999999975
No 230
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.2e-31 Score=280.07 Aligned_cols=239 Identities=23% Similarity=0.290 Sum_probs=196.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
+.|+..+.||+|.-|+||+++.+ ++..+|+|++.+... ....+++.|.+||+.+.||.++.+|..++.++..++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 34556678999999999999976 458899999987633 33557788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC-
Q 001988 802 EYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE- 879 (985)
Q Consensus 802 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~- 879 (985)
|||+||+|....+.+ ++.+++...+-+|.+++-||+|| |..|||+|||||+|||+-++|++-|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYL---HmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYL---HMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHH---HhhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999988766 56799999999999999999999 8999999999999999999999999999987542110
Q ss_pred --------------------------------CC---------------------cceecccccccccccccccccCccc
Q 001988 880 --------------------------------DE---------------------STMRTQTLATIGYMAPDEIFVGELS 906 (985)
Q Consensus 880 --------------------------------~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 906 (985)
.. .......+||-.|+|||++.+..-+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 00 0112345799999999999998888
Q ss_pred hhhhcccccccchhhhcccccccCcch-------------hhhhHHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 001988 907 LKRWVNDLLPVSLVEVVDKSLLSGEEK-------------HFAAKEQCLLSIFSLALECTMESPEKRID----AKDTIT 968 (985)
Q Consensus 907 ~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~l~~l~~~cl~~~P~~RPt----~~ev~~ 968 (985)
.+.|. |.+|++++||+-|.-++.... .++.....+....++|++.+..||.+|.. |.||-+
T Consensus 314 sAVDW-WtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 314 SAVDW-WTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred chhhH-HHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 88776 999999999998876554332 11122245678999999999999999997 666643
No 231
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.9e-31 Score=292.68 Aligned_cols=236 Identities=22% Similarity=0.295 Sum_probs=196.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||+|+||.||+|... ++..||+|.++..... ...++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999865 6888999998755322 345688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.++++.. ..+++.....++.|+++||+|| |+ .+++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~l---H~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYL---REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 9999999999865 3678999999999999999999 54 68999999999999999999999999998765322
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......+++.|+|||.+.+..++.+.|+ |++|+++++++++..+........
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~Di-wslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 -MANSFVGTRSYMSPERLQGTHYTVQSDI-WSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred -ccccCCCCcCccChhHhcCCCCCccchH-HHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 1233468999999999888888999999 999999999999876532110000
Q ss_pred ---h--------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 937 ---A--------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 937 ---~--------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
. ....+.++.+++.+|+..+|++||++.++++.-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 001345789999999999999999999998763
No 232
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=4.1e-31 Score=295.58 Aligned_cols=239 Identities=19% Similarity=0.224 Sum_probs=194.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+++.+ +++.||+|++.+.. ......+..|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999865 67889999986431 122345788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++|+|.+++......+++.....++.|++.|++|| |+++|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~l---H~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 99999999999987655789999999999999999999 789999999999999999999999999999976542222
Q ss_pred cceecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchhh----------------hhHHH
Q 001988 882 STMRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----------------AAKEQ 940 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----------------~~~~~ 940 (985)
......+||+.|+|||++. .+.++.++|+ |++|++++++++|+.++...... .....
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dv-wSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 235 (332)
T cd05623 158 -VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDW-WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTD 235 (332)
T ss_pred -ceecccccCccccCHHHHhccccCCCCCCCcCCE-EeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCcccc
Confidence 2223456999999999886 3567889999 99999999999988765432111 11123
Q ss_pred HHHHHHHHHHHccCCCCC--CCCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPE--KRIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~--~RPt~~ev~~~ 969 (985)
++.++.+++++|+..+++ .|+++.|+++.
T Consensus 236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 567788999998865444 37889888766
No 233
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=6.4e-31 Score=286.21 Aligned_cols=241 Identities=20% Similarity=0.342 Sum_probs=198.7
Q ss_pred cCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 798 (985)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+...... ....+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888899999999999999864 3467999988755333 3567899999999999999999999999989999
Q ss_pred EEEeccCCCChHHHhhcCC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecc
Q 001988 799 LVLEYMSNGSLEDCLHSSN--------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDF 870 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~Df 870 (985)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|| |+.+|+||||||+||++++++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh---hhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997653 1589999999999999999999 8999999999999999999999999999
Q ss_pred cCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh-------------hh
Q 001988 871 GMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH-------------FA 936 (985)
Q Consensus 871 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~-------------~~ 936 (985)
|++....... ........++..|+|||.+.++.++.++|+ |++|+.++++++ +..+...... ..
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di-~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 239 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDV-WSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP 239 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhH-HHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC
Confidence 9987543221 122233456788999999988888999999 999999999987 4433322111 11
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
.+..++..+.+++.+|++.+|.+||++.|+++.|.
T Consensus 240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 12235678999999999999999999999999875
No 234
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=2.9e-31 Score=296.76 Aligned_cols=224 Identities=24% Similarity=0.223 Sum_probs=181.3
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhc---CCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNI---RHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
||+|+||.||+|+.. +++.||||++.+... .....+..|..++.+. +||+|+++++++.+++..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 689999999865321 2233455677777665 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.+++...+ .+++.....++.||++||+|| |++||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~L---H~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHL---HKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTN 154 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCcc
Confidence 99999987653 688999999999999999999 78999999999999999999999999999987642221 1223
Q ss_pred ccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhh------------HHHHHHHHHHHHHHcc
Q 001988 887 QTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------KEQCLLSIFSLALECT 953 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------~~~~~~~l~~l~~~cl 953 (985)
..+||+.|+|||.+.+. .++.++|+ |++|+.++++++|..+......... ....++++.+++.+|+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~Dv-wslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L 233 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDF-WSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLL 233 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccce-eccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence 45699999999998764 47889999 9999999999998876543211110 0124577889999999
Q ss_pred CCCCCCCCCHH
Q 001988 954 MESPEKRIDAK 964 (985)
Q Consensus 954 ~~~P~~RPt~~ 964 (985)
..+|.+||++.
T Consensus 234 ~~~P~~R~~~~ 244 (330)
T cd05586 234 NRNPQHRLGAH 244 (330)
T ss_pred CCCHHHCCCCC
Confidence 99999999543
No 235
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.2e-31 Score=304.24 Aligned_cols=234 Identities=21% Similarity=0.208 Sum_probs=193.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc---CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE---DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
..+|...+.||+|+||.||+|... +++.||+|.+... ....+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 4678999987643 34568999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+. ++|.+++... ..+++.+++.++.|++.||+|| |++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 166 e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~L---H~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYL---HGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9995 6898888543 4789999999999999999999 789999999999999999999999999999987654433
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh--------------------h-----
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------------A----- 936 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------------~----- 936 (985)
........||+.|+|||.+....++.++|+ |++|+++++++++..+....... +
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv-wslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDI-WSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhH-HHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 333345679999999999999999999999 99999999999877544221000 0
Q ss_pred ------------------hH-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 ------------------AK-----EQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 ------------------~~-----~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+ ...+.++.+++.+|+..||.+||++.|++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 0123467789999999999999999999875
No 236
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=2.5e-31 Score=290.65 Aligned_cols=234 Identities=23% Similarity=0.296 Sum_probs=196.0
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
|+..+.||+|+||.||+|... +++.||+|.+...... ....+.+|+.++++++|++++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999865 7899999998754222 234577899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++... ...+++..+..++.|++.||.|| |+++|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDL---HQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 9999999988654 33588999999999999999999 789999999999999999999999999999876532221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh---------------hhHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQCLLSIFS 947 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~l~~ 947 (985)
.....|++.|+|||.+.+..++.++|+ |++|+.++++++|..+....... ..+..++.++.+
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~Di-wslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDW-WALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARS 234 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCcccc-HHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHH
Confidence 123468999999999999999999999 99999999999998776532110 001124567899
Q ss_pred HHHHccCCCCCCCCC-----HHHHHH
Q 001988 948 LALECTMESPEKRID-----AKDTIT 968 (985)
Q Consensus 948 l~~~cl~~~P~~RPt-----~~ev~~ 968 (985)
++.+||..||++||+ +.|+++
T Consensus 235 li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 235 LCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHhhcCHHHccCCCCCchHHHHc
Confidence 999999999999999 788876
No 237
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=4.5e-31 Score=286.41 Aligned_cols=234 Identities=21% Similarity=0.264 Sum_probs=183.8
Q ss_pred eeeccCceeEEEEEEc---CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCC
Q 001988 733 IIGIGGFGSVYRARLE---DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGS 808 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 808 (985)
.||+|+||.||+|... ....+|+|.+..... .....+.+|+++++.++||||+++++++.+.+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5899999999999754 335688888764432 234567899999999999999999999999999999999999999
Q ss_pred hHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 809 LEDCLHSSN----CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 809 L~~~l~~~~----~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
|.+++.... ...++.....++.|++.|++|| |+++|+||||||+||++++++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL---HQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHH---HhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999997642 2346777889999999999999 789999999999999999999999999999876432222111
Q ss_pred ecccccccccccccccc-------cCccchhhhcccccccchhhhcc-cccccCcchhh-----------------hhHH
Q 001988 885 RTQTLATIGYMAPDEIF-------VGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF-----------------AAKE 939 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~-------~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~-----------------~~~~ 939 (985)
.....+++.|+|||.+. ...++.++|+ |++|+.++++++ +..+....... ..+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di-wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNI-WSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDL 237 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHH-HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccc
Confidence 23334677899999864 3456788999 999999999987 55443322111 0112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
.++..+.+++..|| .||++||++.||++.+.
T Consensus 238 ~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 238 KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 34567788999999 59999999999998863
No 238
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=7.2e-31 Score=284.46 Aligned_cols=237 Identities=25% Similarity=0.344 Sum_probs=197.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---------TLKSFEAECEVIKNIRHRNLVKIISSCSNDDF 796 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~ 796 (985)
+|.....||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677889999999999999864 6889999988654222 12467899999999999999999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
.++||||+++++|.+++...+ .+++.....++.|++.|++|| |+.|++||||+|+||++++++.+||+|||.++.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~l---H~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYL---HNRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHH---HhcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999997653 678889999999999999999 7899999999999999999999999999999876
Q ss_pred cCCCCc----ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHH
Q 001988 877 SGEDES----TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQ 940 (985)
Q Consensus 877 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~ 940 (985)
...... .......|+..|+|||.+.+..++.++|+ |++|+++++++++..+....... ..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADI-WSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSN 235 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhh-HHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcc
Confidence 522111 11123458889999999988889999999 99999999999988765432111 11233
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+..+.+++++||+.+|.+||++.|+++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 236 ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 5678899999999999999999999875
No 239
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=4.6e-31 Score=289.14 Aligned_cols=247 Identities=24% Similarity=0.307 Sum_probs=199.5
Q ss_pred cCHHHHHHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeee-
Q 001988 716 FSYFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCS- 792 (985)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~- 792 (985)
+.++.+..+.++|+..+.||+|+||.||+|... +++.||+|++... ......+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 444556667889999999999999999999864 6889999987653 22346688999999999 6999999999874
Q ss_pred ----cCCceEEEEeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcE
Q 001988 793 ----NDDFKALVLEYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 865 (985)
Q Consensus 793 ----~~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~ 865 (985)
.++..++||||+++++|.+++.. ....+++..+..++.|+++|+.|| |+.+++||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL---HVNKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH---HhCCccccCCCHHhEEECCCCCE
Confidence 34568999999999999998763 234678889999999999999999 78999999999999999999999
Q ss_pred EEecccCceeccCCCCcceecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchhhh----
Q 001988 866 HLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---- 936 (985)
Q Consensus 866 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---- 936 (985)
||+|||+++.+..... ......|++.|+|||.+. ...++.++|+ |++|+.++++++++.+........
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv-~slGvi~~el~~g~~p~~~~~~~~~~~~ 240 (286)
T cd06638 164 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDV-WSLGITAIELGDGDPPLADLHPMRALFK 240 (286)
T ss_pred EEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhh-hhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence 9999999987643221 223346899999999875 3457889999 999999999999876543221110
Q ss_pred ----------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 ----------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 ----------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.++.+..++.+++.+||+.+|++||++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 112235679999999999999999999999874
No 240
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=3.8e-31 Score=286.28 Aligned_cols=237 Identities=21% Similarity=0.342 Sum_probs=198.3
Q ss_pred CccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCc------chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCA------STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
+|...+.||+|+||.||+|...+++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999988899999998875421 1235688999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++++|.+++.... .+++..+..++.|++.|++|| |+.+|+|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYL---HNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999997654 578899999999999999999 78999999999999999999999999999987653211
Q ss_pred C----cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh--------------hhHHHHH
Q 001988 881 E----STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQCL 942 (985)
Q Consensus 881 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~~ 942 (985)
. ........++..|+|||.+.+..++.++|+ |++|+.+++++++..+....... ..+..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv-~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDI-WSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS 235 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhH-HHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCC
Confidence 1 111223458999999999998889999999 99999999999988765432111 1122346
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 943 LSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 943 ~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+++.+++++||..+|.+||++.|+++
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 77899999999999999999999875
No 241
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=8.3e-31 Score=282.09 Aligned_cols=237 Identities=22% Similarity=0.300 Sum_probs=200.8
Q ss_pred CccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||.|+||.||.++. ++++.||+|.+.... ......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999985 478899999987542 33456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++|+|.+++... ...+++.++..++.|++.|++|| |+.+++||||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYI---HKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999865 45689999999999999999999 789999999999999999999999999999987643331
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSLAL 950 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l~~ 950 (985)
......+++.|+|||...+..++.++|+ |++|+.+++++++..+........ ....++.++.+++.
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv-~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDI-WALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVH 234 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchh-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHH
Confidence 2234568999999999988888899999 999999999998876543321111 11234677999999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
+||+.+|.+||++.|+++.
T Consensus 235 ~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 235 SLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHcccCcccCCCHHHHhhC
Confidence 9999999999999999875
No 242
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=5.9e-31 Score=287.88 Aligned_cols=235 Identities=22% Similarity=0.270 Sum_probs=195.7
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
|+..+.||+|+||+||+|... +++.||+|.+..... .....+.+|++++++++|++|+++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999864 789999999865422 2234567899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++... ...+++.....++.|++.||+|| |+++|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDL---HRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 9999999988654 34689999999999999999999 78999999999999999999999999999987653221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh---------------hHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQCLLSIFS 947 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~~~~~l~~ 947 (985)
......|+..|+|||.+.+..++.++|+ |++|+.+++++++..+........ .+...+.++.+
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di-~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDY-WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKS 234 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccch-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHH
Confidence 1233468999999999998999999999 999999999999987765432111 11234567899
Q ss_pred HHHHccCCCCCCCCC-----HHHHHHH
Q 001988 948 LALECTMESPEKRID-----AKDTITR 969 (985)
Q Consensus 948 l~~~cl~~~P~~RPt-----~~ev~~~ 969 (985)
++..|++.+|++||+ +.+++..
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 235 ICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHHHHccCCHhHcCCCcccChHHHHcC
Confidence 999999999999999 6666653
No 243
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.5e-31 Score=291.12 Aligned_cols=235 Identities=26% Similarity=0.340 Sum_probs=201.1
Q ss_pred cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++|||++++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688889999999999999985 478999999997665555678899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... .+++.++..++.|++.|++|| |+.|++||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~L---H~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~ 171 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFL---HANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--K 171 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--c
Confidence 999999988754 578999999999999999999 789999999999999999999999999999876543221 1
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh--------------hhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~~~~l~~l~~ 950 (985)
.....+++.|+|||.+....++.++|+ |++|+.+++++++..+....... ..+..++..+.+++.
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 250 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDI-WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLN 250 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHH
Confidence 223468899999999998889999999 99999999999988755432111 122335677899999
Q ss_pred HccCCCCCCCCCHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~ 968 (985)
+||..+|.+||++.++++
T Consensus 251 ~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 251 RCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHhhcChhhCCCHHHHhh
Confidence 999999999999999985
No 244
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.2e-31 Score=299.12 Aligned_cols=188 Identities=20% Similarity=0.239 Sum_probs=163.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
...+|...+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++...+..++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4467999999999999999999875 6778999975432 23569999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+ .++|.+++......+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 138 ~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 210 (357)
T PHA03209 138 HY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYL---HAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--- 210 (357)
T ss_pred cc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEecCccccccccC---
Confidence 99 4689999887766789999999999999999999 7899999999999999999999999999998753211
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhccc
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK 925 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~ 925 (985)
.......||+.|+|||.+.+..++.++|+ |++|+++++++++
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvvl~ell~~ 252 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADI-WSAGIVLFEMLAY 252 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhH-HHHHHHHHHHHHc
Confidence 12234569999999999999999999999 9999999999864
No 245
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=4.5e-31 Score=286.40 Aligned_cols=237 Identities=25% Similarity=0.416 Sum_probs=193.9
Q ss_pred ceeeccCceeEEEEEEcC-------CcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 732 NIIGIGGFGSVYRARLED-------GVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~-------~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 358999999999998642 2579999886543 23456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-----cEEEecccC
Q 001988 804 MSNGSLEDCLHSS------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-----VAHLSDFGM 872 (985)
Q Consensus 804 ~~~gsL~~~l~~~------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-----~~kl~DfGl 872 (985)
+++++|.+++... ...+++.+++.++.|++.|++|| |+.+++||||||+||+++.++ .+|++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL---EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHH---HhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999998753 23478899999999999999999 789999999999999999887 899999999
Q ss_pred ceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHH
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKE 939 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~ 939 (985)
++...............++..|+|||.+.++.++.++|+ |++|+.++++++ +..+...... ...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDV-WSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPE 236 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhH-HHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcc
Confidence 976543322222223346788999999999999999999 999999999987 6654332111 11223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
..+..+.+++.+||..+|.+||++.++.+.|++
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 237 NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 456789999999999999999999999998863
No 246
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=8.5e-31 Score=285.52 Aligned_cols=235 Identities=24% Similarity=0.325 Sum_probs=199.9
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667788999999999999865 68899999987543 334567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++|+|.+++... .+++.+...++.|++.|++|+ |+.+++|+||+|+||+++.++.++++|||++..+.... ..
T Consensus 85 ~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~l---h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06640 85 GGGSALDLLRAG--PFDEFQIATMLKEILKGLDYL---HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--cc
Confidence 999999998754 578889999999999999999 78999999999999999999999999999998764322 12
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch------------hhhhHHHHHHHHHHHHHHc
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK------------HFAAKEQCLLSIFSLALEC 952 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~------------~~~~~~~~~~~l~~l~~~c 952 (985)
.....++..|+|||.+.+..++.++|+ |++|+.++++++|..+..... .......++..+.+++.+|
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv-~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADI-WSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDAC 236 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHH-HHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHH
Confidence 233458889999999988889999999 999999999999987654221 1112335677899999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITR 969 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~ 969 (985)
|+.+|++||++.++++.
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 237 LNKDPSFRPTAKELLKH 253 (277)
T ss_pred cccCcccCcCHHHHHhC
Confidence 99999999999999776
No 247
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=6.2e-31 Score=290.26 Aligned_cols=236 Identities=20% Similarity=0.284 Sum_probs=194.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|...+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57888999999999999999865 688999999875432 2345678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++ ++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||++++++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-- 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--
Confidence 96 599999887666788999999999999999999 789999999999999999999999999999876532221
Q ss_pred eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......+++.|+|||.+.+ ..++.++|+ |++|++++++++|..+........
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv-~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDM-WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 1223457889999998765 347788999 999999999999886543221100
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..+.++..+.+++.+|+..||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00113456789999999999999999999986
No 248
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=6.9e-31 Score=283.18 Aligned_cols=227 Identities=22% Similarity=0.352 Sum_probs=186.1
Q ss_pred ceeeccCceeEEEEEEcCC-----------cEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 732 NIIGIGGFGSVYRARLEDG-----------VEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~-----------~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
+.||+|+||.||+|...+. ..||+|.+...... ...+.+|+.++++++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 4689999999999987633 25788877654322 6788999999999999999999999988 778999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-------cEEEecccCc
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-------VAHLSDFGMA 873 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-------~~kl~DfGla 873 (985)
|||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYL---EDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 999999999999987665789999999999999999999 899999999999999999888 8999999999
Q ss_pred eeccCCCCcceecccccccccccccccccC--ccchhhhcccccccchhhhccc-ccccCcchhhhh----------HHH
Q 001988 874 KLLSGEDESTMRTQTLATIGYMAPDEIFVG--ELSLKRWVNDLLPVSLVEVVDK-SLLSGEEKHFAA----------KEQ 940 (985)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~~~~~~----------~~~ 940 (985)
+.... .....++..|+|||++... .++.++|+ |++|+.+++++.+ ..+......... +..
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di-~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 228 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADK-WSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMP 228 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHH-HHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCC
Confidence 87532 1223467789999998776 78899999 9999999999874 433222110000 001
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
....+.+++.+||..+|.+||++.|+++.|
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 229 DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 126788999999999999999999999876
No 249
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=295.85 Aligned_cols=245 Identities=22% Similarity=0.361 Sum_probs=210.5
Q ss_pred cCCceeeccCceeEEEEEE-cCC----cEEEEEEeccC-CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 729 AENNIIGIGGFGSVYRARL-EDG----VEIAIKVFHPQ-CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~-~~~----~~vAvK~~~~~-~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
+..++||+|+||+||+|.+ .+| .+||||++... ......++..|+-+|.+++|||+++++++|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 4567899999999999975 343 35899988755 3345678999999999999999999999998776 789999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+|.|+|.|+++.++..+-....+.|..|||+||.|| |++++|||||.++|||+..-..+|+.|||+|+....++..
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YL---e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYL---EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHH---HhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 9999999999999888888999999999999999999 8999999999999999999999999999999998766666
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhccccc-ccCcc------------hhhhhHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL-LSGEE------------KHFAAKEQCLLSIFSLA 949 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~-~~~~~------------~~~~~~~~~~~~l~~l~ 949 (985)
.......-.+.|||-|.+....++.++|| |++|+.+||+++-.- +.... .+..+++-|...++.+|
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDV-WsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~m 933 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDV-WSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVM 933 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhh-hhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHH
Confidence 55555556778999999999999999999 999999999987322 11111 13445666889999999
Q ss_pred HHccCCCCCCCCCHHHHHHHHHHhHhhhc
Q 001988 950 LECTMESPEKRIDAKDTITRLLKIRDTLS 978 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~L~~i~~~~~ 978 (985)
.+||+.|++.||+++++...+.++.++..
T Consensus 934 vkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 934 VKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred HHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 99999999999999999999998876543
No 250
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=7.6e-31 Score=287.26 Aligned_cols=235 Identities=23% Similarity=0.327 Sum_probs=191.8
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999865 789999999875422 2346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 804 MSNGSLEDCLHSS--NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 804 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
++ ++|.+++... +..+++..+..++.|+++||+|| |+++++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC---HSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 6898888653 24689999999999999999999 78999999999999999999999999999987653221
Q ss_pred cceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhh-----------------------
Q 001988 882 STMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------------- 937 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------------- 937 (985)
.......+++.|+|||.+.+. .++.++|+ |++|+.+++++++..+.........
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI-WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 112233578899999987654 46889999 9999999999998765432211000
Q ss_pred -----------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -----------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -----------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...+++++.+++++|+..||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0113466789999999999999999999875
No 251
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=9e-31 Score=287.12 Aligned_cols=234 Identities=25% Similarity=0.346 Sum_probs=188.3
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhc---CCCCeeeEEeeeec-----CC
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNI---RHRNLVKIISSCSN-----DD 795 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l---~h~niv~l~~~~~~-----~~ 795 (985)
+|+..+.||+|+||.||+|+.. +++.||+|.++..... ....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999865 7889999998754322 234566788877766 69999999998864 24
Q ss_pred ceEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 796 FKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
..++||||++ ++|.+++... ...+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5789999997 4898888764 33589999999999999999999 78999999999999999999999999999998
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------ 936 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------ 936 (985)
.+.... ......+|+.|+|||.+.+..++.++|+ |++|+.+++++++..+........
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di-wslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDM-WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCcc---cCCCccccccccCchHhhCCCCCCcchh-hhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 764222 1233468999999999999999999999 999999999998776543221100
Q ss_pred --------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 --------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 --------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+++++.+++.+|+++||++||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00123566789999999999999999999875
No 252
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=8e-31 Score=285.30 Aligned_cols=235 Identities=24% Similarity=0.319 Sum_probs=200.4
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36778889999999999999865 78899999987653 33456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|.+++... .+++.....++.|++.|++|| |+++++||||+|+||++++++.++++|||+++.+.... .
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYL---HEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 9999999999865 688999999999999999999 78999999999999999999999999999998875332 1
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHH-HHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQ-CLLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~-~~~~l~~l~~ 950 (985)
......+++.|+|||.+.+..++.++|+ |++|+.++++++|..+........ ..+. .+..+.+++.
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv-~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADI-WSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhH-HHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHH
Confidence 2234468889999999999889999999 999999999999887654321110 0111 4677999999
Q ss_pred HccCCCCCCCCCHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~ 968 (985)
+|+..+|++||+++++++
T Consensus 233 ~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 233 LCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999976
No 253
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=5.6e-31 Score=297.63 Aligned_cols=235 Identities=22% Similarity=0.260 Sum_probs=191.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC------
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND------ 794 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~------ 794 (985)
..++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999864 68899999987542 22345678899999999999999999988643
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|| |++||+||||||+||++++++.+||+|||+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~L---H~~givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 346899999965 67776653 478888899999999999999 78999999999999999999999999999998
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------- 937 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------- 937 (985)
..... .......||+.|+|||.+.+..++.++|+ |++|++++++++++.++........
T Consensus 168 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~Di-wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 168 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDI-WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cCCCc---cccCCccccCCccCHHHHcCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 65322 12234568999999999999899999999 9999999999998865432210000
Q ss_pred ------------------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 ------------------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 ------------------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
......++.+++.+|+..||.+|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00013457899999999999999999999984
No 254
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=1.6e-30 Score=279.98 Aligned_cols=237 Identities=29% Similarity=0.482 Sum_probs=197.1
Q ss_pred cCCceeeccCceeEEEEEEcC-----CcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 729 AENNIIGIGGFGSVYRARLED-----GVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~~~-----~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
...+.||.|+||.||+|+..+ +..||+|.+...... ..+.+..|++++++++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456889999999999998753 378999999766443 56788999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 803 YMSNGSLEDCLHSSNCA-LNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~-~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|+++++|.+++...... +++..+..++.|++.|++|| |+.+++||||||+||++++++.++++|||+++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH---hcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999876434 89999999999999999999 899999999999999999999999999999987653322
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhh------------hhHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHF------------AAKEQCLLSIFSL 948 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~------------~~~~~~~~~l~~l 948 (985)
... ....+++.|+|||.+....++.++|+ |++|++++++++ +..+....... ..+..++.++.++
T Consensus 159 ~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di-~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (258)
T smart00219 159 YKK-KGGKLPIRWMAPESLKDGKFTSKSDV-WSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKL 236 (258)
T ss_pred ccc-ccCCCcccccChHHhccCCCCcchhH-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHH
Confidence 211 12236789999999988889999999 999999999987 44433221111 1122356789999
Q ss_pred HHHccCCCCCCCCCHHHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~L 970 (985)
+.+|+..+|.+||++.|+++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998764
No 255
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=9.4e-31 Score=296.75 Aligned_cols=235 Identities=21% Similarity=0.247 Sum_probs=191.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC------
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND------ 794 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~------ 794 (985)
..++|...+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999864 68899999987542 23346678999999999999999999987543
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
...++||||+++ ++.+.+.. .+++.....++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999965 77777753 467888999999999999999 89999999999999999999999999999998
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhhH----------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAK---------------- 938 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~---------------- 938 (985)
..... .......+|+.|+|||.+.+..++.++|+ |++|++++++++|..++.........
T Consensus 175 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~Di-wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 175 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDI-WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhH-HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 65321 12234568999999999999999999999 99999999999988655322110000
Q ss_pred -------------------------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 939 -------------------------------------EQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 939 -------------------------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.....++.+++.+|+..||.+|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0012457899999999999999999999874
No 256
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=5.5e-31 Score=288.13 Aligned_cols=237 Identities=22% Similarity=0.308 Sum_probs=199.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56778889999999999999865 68899999886543 23356789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|.+++...+ .+++.....++.+++.|+.||| +.++++||||||+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH--HhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999999987653 6889999999999999999995 34689999999999999999999999999987653221
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh-----------h-------------hHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-----------A-------------AKE 939 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-----------~-------------~~~ 939 (985)
.....|+..|+|||.+.++.++.++|+ |++|+.+++++++..+....... . ...
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di-~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDV-WSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSS 236 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchH-HHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCch
Confidence 223468999999999988899999999 99999999999988765432110 0 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
.++.++.+++.+|+..||++||++.|+++..
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 2556789999999999999999999999864
No 257
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=4.1e-31 Score=288.04 Aligned_cols=235 Identities=25% Similarity=0.338 Sum_probs=197.5
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3556678999999999999864 67889999987543 234567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... .+++..+..++.|+++|+.|| |+++++|+||+|+||++++++.+|++|||++..+.... ..
T Consensus 85 ~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~l---H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06642 85 GGGSALDLLKPG--PLEETYIATILREILKGLDYL---HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---hcCCeeccCCChheEEEeCCCCEEEccccccccccCcc--hh
Confidence 999999988753 578999999999999999999 78999999999999999999999999999998764322 11
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHHHHHHHHHHHHHc
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQCLLSIFSLALEC 952 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~l~~l~~~c 952 (985)
.....++..|+|||.+.+..++.++|+ |++|+.++++++|..+....... .....++.++.+++.+|
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADI-WSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhH-HHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHH
Confidence 223458889999999999899999999 99999999999988765322111 11123567799999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITR 969 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~ 969 (985)
|+.+|++||++.++++.
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999983
No 258
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=6.5e-31 Score=287.94 Aligned_cols=237 Identities=22% Similarity=0.306 Sum_probs=196.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||+|+||.||+|... +++.||+|.++.... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36778899999999999999876 789999998875422 2346788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 804 MSNGSLEDCLHSS--NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 804 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
+++++|.+++... ...+++..+..++.|++.|+.||| ++.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK--EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH--hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999999988764 236899999999999999999995 35699999999999999999999999999987653221
Q ss_pred cceecccccccccccccccccCc------cchhhhcccccccchhhhcccccccCcchh---------------hhhHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGE------LSLKRWVNDLLPVSLVEVVDKSLLSGEEKH---------------FAAKEQ 940 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~---------------~~~~~~ 940 (985)
.....+++.|+|||.+.+.. ++.++|+ |++|+.+++++++..+...... ...+..
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di-wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDV-WSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG 233 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccch-HhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc
Confidence 22345888999999885543 4788999 9999999999998876532211 111233
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++.++.+++.+|+..+|++||++.+++..
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 234 YSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 56788999999999999999999999874
No 259
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=2e-30 Score=279.25 Aligned_cols=237 Identities=24% Similarity=0.328 Sum_probs=197.0
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeec-CCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSN-DDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~-~~~~~lv~e 802 (985)
+|+..+.||+|+||.||++..+ +++.||+|.+..... ...+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999865 678899999875432 334578899999999999999999998764 446789999
Q ss_pred ccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 803 YMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|+++++|.+++... ...+++.++..++.|++.|++|+ |+.|++||||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~l---H~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYL---HEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 99999999999864 34589999999999999999999 78999999999999999999999999999998764322
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSLA 949 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l~ 949 (985)
.......+++.|+|||...+..++.++|+ |++|++++++++++.+........ .+...++++.+++
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 234 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDV-WALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELI 234 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhh-HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHH
Confidence 12234468899999999999999999999 999999999999876543321111 1123457799999
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+|+..+|++||++.++++.
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHhccCcccCCCHHHHhcC
Confidence 99999999999999999763
No 260
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=1.5e-30 Score=279.78 Aligned_cols=234 Identities=28% Similarity=0.424 Sum_probs=194.4
Q ss_pred cCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
++|...+.||+|+||.||+|.. +++.||+|.++... ....+.+|+.++++++|||++++++++...+ .++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCC
Confidence 4688889999999999999975 57889999986542 3467889999999999999999999987654 689999999
Q ss_pred CCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 806 NGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 806 ~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
+++|.+++.... ..+++..+.+++.|++.|++|| |+.|++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 999999997653 3578999999999999999999 78999999999999999999999999999987643211
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchh------------hhhHHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKH------------FAAKEQCLLSIFSLALE 951 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~------------~~~~~~~~~~l~~l~~~ 951 (985)
.....+..|+|||.+..+.++.+.|+ |++|+.++++++ +..+...... ...++.+++++.+++.+
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv-~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 232 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDV-WSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTS 232 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhH-HHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHH
Confidence 12234568999999988899999999 999999999986 6554332211 01123356789999999
Q ss_pred ccCCCCCCCCCHHHHHHHHHH
Q 001988 952 CTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~L~~ 972 (985)
||+.+|++||++.++++.|++
T Consensus 233 ~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 233 CWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HcCCChhhCcCHHHHHHHHcc
Confidence 999999999999999998763
No 261
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.2e-31 Score=294.34 Aligned_cols=229 Identities=23% Similarity=0.359 Sum_probs=190.3
Q ss_pred CceeeccCceeEEEEEEc-CCcEEEEEEeccC----CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc--eEEEEec
Q 001988 731 NNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ----CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDF--KALVLEY 803 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~----~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~--~~lv~e~ 803 (985)
.++||+|+|-+||+|.+. +|.+||.-.++.. ......+|..|+++|+.++|||||++|.+|.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 457999999999999864 7888876555422 33445789999999999999999999999987655 6789999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc-CCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+..|+|+.|.++.+ ..+....+.|++||+.||.|||. |.++|||||||-+||||+ .-|.|||+|+|+|+....
T Consensus 125 ~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~---- 198 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK---- 198 (632)
T ss_pred ccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhc----
Confidence 99999999998775 67889999999999999999997 888999999999999996 568999999999998642
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhhH--------------HHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAK--------------EQCLLSIFSL 948 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~--------------~~~~~~l~~l 948 (985)
.....+.|||.|||||.+- ..|....|| |+||++++||++++-++..=....+. .-..+++.++
T Consensus 199 s~aksvIGTPEFMAPEmYE-E~YnE~VDV-YaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~f 276 (632)
T KOG0584|consen 199 SHAKSVIGTPEFMAPEMYE-ENYNELVDV-YAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREF 276 (632)
T ss_pred cccceeccCccccChHHHh-hhcchhhhh-hhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHH
Confidence 2334478999999999755 889999999 99999999999988665432111110 1124678999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~ 968 (985)
|.+|+.. ..+||++.|++.
T Consensus 277 IekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 277 IEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHhcC-chhccCHHHHhh
Confidence 9999999 999999999985
No 262
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=9e-31 Score=306.26 Aligned_cols=236 Identities=19% Similarity=0.241 Sum_probs=188.5
Q ss_pred HHHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCC------CCeeeEEeeeec
Q 001988 721 LLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRH------RNLVKIISSCSN 793 (985)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h------~niv~l~~~~~~ 793 (985)
+...+++|+..+.||+|+||.||+|... +++.||||+++.. ......+..|+.++++++| ++++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345688999999999999999999864 6788999998643 2233456778888887754 458889998876
Q ss_pred C-CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCC--------
Q 001988 794 D-DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDM-------- 863 (985)
Q Consensus 794 ~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~-------- 863 (985)
. ++.++|||++ +++|.+++...+ .+++..+..++.||+.||+|| |+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yL---H~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYF---HTELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhcCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999998 779999887653 688999999999999999999 55 6999999999999998765
Q ss_pred --------cEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh
Q 001988 864 --------VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF 935 (985)
Q Consensus 864 --------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~ 935 (985)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|+ |++|++++|+++|+.++......
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~Di-wSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDM-WSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCChH
Confidence 49999999876432 12234579999999999999999999999 99999999999998876432110
Q ss_pred hh---------------------------------------HH--------------HHHHHHHHHHHHccCCCCCCCCC
Q 001988 936 AA---------------------------------------KE--------------QCLLSIFSLALECTMESPEKRID 962 (985)
Q Consensus 936 ~~---------------------------------------~~--------------~~~~~l~~l~~~cl~~~P~~RPt 962 (985)
.. +. .....+.+++.+|+.+||++||+
T Consensus 352 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 431 (467)
T PTZ00284 352 EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN 431 (467)
T ss_pred HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence 00 00 01234678999999999999999
Q ss_pred HHHHHH
Q 001988 963 AKDTIT 968 (985)
Q Consensus 963 ~~ev~~ 968 (985)
+.|+++
T Consensus 432 a~e~L~ 437 (467)
T PTZ00284 432 ARQMTT 437 (467)
T ss_pred HHHHhc
Confidence 999986
No 263
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=1.6e-30 Score=289.30 Aligned_cols=231 Identities=20% Similarity=0.271 Sum_probs=181.7
Q ss_pred CceeeccCceeEEEEEEc---CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCceEEEEeccC
Q 001988 731 NNIIGIGGFGSVYRARLE---DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFKALVLEYMS 805 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 805 (985)
+++||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 56789999987542 23457889999999999999999998854 456789999995
Q ss_pred CCChHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----cCCCcEEEecccCc
Q 001988 806 NGSLEDCLHSS--------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL----DEDMVAHLSDFGMA 873 (985)
Q Consensus 806 ~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill----~~~~~~kl~DfGla 873 (985)
++|.+++... ...+++.....++.|++.||+|| |+.||+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5888877532 22478889999999999999999 89999999999999999 46689999999999
Q ss_pred eeccCCCCc-ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchh-----------------
Q 001988 874 KLLSGEDES-TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH----------------- 934 (985)
Q Consensus 874 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~----------------- 934 (985)
+.+...... .......||+.|+|||.+.+ ..++.++|+ |++|+++++++++..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di-wslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI-WAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhH-HHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 876533221 12234568999999999876 457889999 9999999999998765431100
Q ss_pred -------hhhHH----------------------------------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 935 -------FAAKE----------------------------------QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 935 -------~~~~~----------------------------------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+ ....++.+++.+|+..||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 00134678999999999999999999875
No 264
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=1.8e-30 Score=284.35 Aligned_cols=236 Identities=23% Similarity=0.325 Sum_probs=194.4
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|+..+.||+|+||.||+|+.+ +++.||+|++..... ...+.+.+|++++++++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999876 689999999864421 233567899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++++++..+.... ..+++..+..++.|++.||+|| |+.+++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFC---HKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 99998888776544 3689999999999999999999 789999999999999999999999999999987653322
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------ 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------ 937 (985)
......++..|+|||.+.+ ..++.++|+ |++|+.++++++++.+.........
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di-~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDV-WAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhh-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 1223457889999999875 557889999 9999999999998865432211000
Q ss_pred ------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+..+.+++.+||..+|++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0123466889999999999999999999875
No 265
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=2.1e-30 Score=280.82 Aligned_cols=239 Identities=26% Similarity=0.360 Sum_probs=201.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||.|+||.||+|... ++..||+|++.... ....+.+.+|+++++.++|+|++++++.+..++..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999854 68899999987543 23457789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 804 MSNGSLEDCLHSSN--CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 804 ~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
+++++|.+++.... ..+++.....++.|++.|++|| |+.|++||||||+||++++++.+||+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---h~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL---HSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999997642 3688999999999999999999 799999999999999999999999999999887654333
Q ss_pred cc--eecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh--------------h---HHHH
Q 001988 882 ST--MRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------A---KEQC 941 (985)
Q Consensus 882 ~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------~---~~~~ 941 (985)
.. ......|+..|+|||.+... .++.++|+ |++|+.++++++|+.+........ . ....
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv-~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADI-WSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKY 236 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccch-HhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccc
Confidence 21 22344689999999998877 78899999 999999999999987654322110 0 0134
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 942 LLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+.++.+++.+|+..+|++||++.++++
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 237 SKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 577899999999999999999999876
No 266
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=1.7e-30 Score=279.66 Aligned_cols=237 Identities=21% Similarity=0.298 Sum_probs=199.5
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++||||+++++++.+.++.++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778899999999999999854 7899999998643 223456789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++... ...+++.++.+++.|++.|++|| |+.+++|+||+|+||+++.++.++++|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 9999999998764 33578999999999999999999 789999999999999999999999999999987643221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~l~~l~~ 950 (985)
......|++.|+|||...+..++.++|+ |++|+.+++++++..+....... ..+...+.++.+++.
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv-~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDI-WALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVS 234 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccch-hHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHH
Confidence 1223458889999999998889999999 99999999999987654332111 112335677999999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
+||+.+|++||++.|+++.
T Consensus 235 ~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 235 QLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999863
No 267
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=7.4e-31 Score=314.17 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=194.9
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCce
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFK 797 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~ 797 (985)
...++|.+.+.||+|+||.||+|... ++..||+|.+.... ......+..|+.++++++|||||++++++.. ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 35578999999999999999999865 67789999987542 2335678899999999999999999998854 4568
Q ss_pred EEEEeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCeEeCCCCCCCEEEcC---------
Q 001988 798 ALVLEYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGH----STPIIHCDLKPSNVLLDE--------- 861 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h----~~~ivHrDlk~~Nill~~--------- 861 (985)
||||||+++|+|.+++... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999998753 346899999999999999999995321 256999999999999964
Q ss_pred --------CCcEEEecccCceeccCCCCcceeccccccccccccccccc--CccchhhhcccccccchhhhcccccccCc
Q 001988 862 --------DMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV--GELSLKRWVNDLLPVSLVEVVDKSLLSGE 931 (985)
Q Consensus 862 --------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~~~~g~~~~~i~~~~~~~~~ 931 (985)
.+.+||+|||++..+.... ......||+.|+|||++.. ..++.++|+ |++|+++++++++..++..
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDV-WSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDM-WALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHH-HHHHHHHHHHHHCCCCCCc
Confidence 2358999999998764222 2234569999999999864 457889999 9999999999999877643
Q ss_pred chhhhh------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 932 EKHFAA------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 932 ~~~~~~------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...... ....+.++.+++..||..+|.+||++.|++.
T Consensus 246 ~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 321111 1124577999999999999999999999984
No 268
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=2e-30 Score=285.96 Aligned_cols=236 Identities=23% Similarity=0.332 Sum_probs=193.8
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-----hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-----TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
+|...+.||+|+||.||+|... +++.||||.++..... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4677889999999999999865 7899999999765322 234567899999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+ +|+|.+++......+++..+.+++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL---HSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 8999999987654689999999999999999999 88999999999999999999999999999998764332
Q ss_pred Ccceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-----------------------
Q 001988 881 ESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------------- 936 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------------- 936 (985)
. ......+++.|+|||.+.+ ..++.+.|+ |++|+.+++++++..+........
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 R--KMTHQVVTRWYRAPELLFGARHYGVGVDM-WSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred c--cccccccceeeeCHHHHhCCCCCCcHHHH-HHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccc
Confidence 1 1222346888999998864 456888999 999999999998854332111000
Q ss_pred ----------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 ----------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 ----------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.....+.++.+++.+||+.+|++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 001134678899999999999999999999873
No 269
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=1.4e-30 Score=292.95 Aligned_cols=235 Identities=22% Similarity=0.287 Sum_probs=191.1
Q ss_pred HHhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecC-----
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSND----- 794 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~----- 794 (985)
...++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457899999999999999999986 4788999999875422 2345677899999999999999999987543
Q ss_pred -CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCc
Q 001988 795 -DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873 (985)
Q Consensus 795 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla 873 (985)
...+++||++ +++|.+++... .+++..+..++.|+++||+|| |++||+||||||+||++++++.+||+|||++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYI---HSAGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecccCChhhEEECCCCCEEEcCCccc
Confidence 3568999998 78998887643 588999999999999999999 7899999999999999999999999999999
Q ss_pred eeccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh------------H--
Q 001988 874 KLLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------K-- 938 (985)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------~-- 938 (985)
+..... .....||+.|+|||.+.+ ..++.++|+ |++|+++++++++..+......... +
T Consensus 166 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di-wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 166 RQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDI-WSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred eecCCC-----cCCccccccccCchHhcCCccCCchhhh-HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 876422 223468999999999876 568889999 9999999999998765432210000 0
Q ss_pred ----------------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 939 ----------------------------EQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 939 ----------------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
....+.+.+++.+|+..||.+||++.|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0112346789999999999999999999864
No 270
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=2.4e-30 Score=283.45 Aligned_cols=236 Identities=23% Similarity=0.331 Sum_probs=196.7
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||.|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999864 78999999987654 23356789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+ +++|.+++......+++.+++.++.|+++||+|| |+++++||||||+||++++++.++++|||.+........ .
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYM---HANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 9 9999999987666789999999999999999999 789999999999999999999999999999987653322 1
Q ss_pred eecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......++..|+|||.+.+.. ++.++|+ |++|+.+++++++..+........
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDL-WAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHH-HHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 123346899999999886544 5889999 999999999999865432211000
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...+.+.++.+++++|+..+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00123577899999999999999999999875
No 271
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=1.8e-30 Score=281.48 Aligned_cols=234 Identities=20% Similarity=0.286 Sum_probs=181.2
Q ss_pred eeeccCceeEEEEEEcCC---cEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCC
Q 001988 733 IIGIGGFGSVYRARLEDG---VEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGS 808 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~~~---~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 808 (985)
.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975433 346677766443 2345678999999999999999999999999999999999999999
Q ss_pred hHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 809 LEDCLHSSN---CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 809 L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
|.+++.... ...++.....++.|+++||+|| |+.+++||||||+||+++.++.+||+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHM---HKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999997642 2456677788999999999999 7899999999999999999999999999998653222211222
Q ss_pred ccccccccccccccccc-------Cccchhhhcccccccchhhhccc-ccccCcchhhh-----------------hHHH
Q 001988 886 TQTLATIGYMAPDEIFV-------GELSLKRWVNDLLPVSLVEVVDK-SLLSGEEKHFA-----------------AKEQ 940 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~-------~~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~~~~~-----------------~~~~ 940 (985)
....++..|+|||++.. ..++.+.|+ |++|+.+++++++ ..+........ ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di-wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNV-WALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELP 237 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchh-HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCC
Confidence 34568889999998743 235678899 9999999999864 32222111100 0112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
..+.+.+++..|| .+|++||++.++++.|.
T Consensus 238 ~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 238 YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3566888999999 67999999999998873
No 272
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=2.1e-30 Score=281.68 Aligned_cols=237 Identities=24% Similarity=0.378 Sum_probs=195.0
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc----------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCC
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS----------TLKSFEAECEVIKNIRHRNLVKIISSCSNDD 795 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~----------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~ 795 (985)
+|...+.||.|+||.||+|... +++.||+|.++..... ..+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999854 7899999988642111 1245788999999999999999999999999
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
..++||||+++++|.+++...+ .+++..+..++.|++.|+.|| |+++++||||+|+||+++.++.++++|||+++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYL---HSKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---hhCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999999998764 688899999999999999999 789999999999999999999999999999976
Q ss_pred ccCCCCcceecccccccccccccccccCc--cchhhhcccccccchhhhcccccccCcchhhh-----------------
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFVGE--LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------- 936 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------- 936 (985)
..............++..|+|||.+.... ++.++|+ |++|+++++++++..+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDI-WSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPD 236 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchh-HHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcc
Confidence 54322222233445889999999987655 7889999 999999999999876653221110
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....++.++.+++.+|+.++|++||++.++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 01124678999999999999999999999876
No 273
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=2.5e-30 Score=278.57 Aligned_cols=234 Identities=24% Similarity=0.325 Sum_probs=197.8
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-----cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-----ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++......++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999976 78999999986543 12346788999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++++|.+++.... .+++..+..++.|+++|++|| |+.|++||||+|+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYL---HDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999997654 578999999999999999999 78999999999999999999999999999988754322
Q ss_pred CcceecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhhh-------------hHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------AKEQCLLSIF 946 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------~~~~~~~~l~ 946 (985)
......+++.|+|||.+.... ++.++|+ |++|+.+++++++..+........ .++.+.+.+.
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~-~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADI-WSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAK 232 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhh-HHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHH
Confidence 223456889999999987776 8899999 999999999999887654432111 1122457789
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 001988 947 SLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+++.+||..+|++||++.++++
T Consensus 233 ~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 233 DFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHhhcCcccCcCHHHHhc
Confidence 9999999999999999999975
No 274
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=3.1e-30 Score=279.31 Aligned_cols=237 Identities=25% Similarity=0.319 Sum_probs=192.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-----chHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCce
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-----STLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFK 797 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~ 797 (985)
.+|...+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++.+ .+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999864 689999998864421 223568899999999999999999998865 3567
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
+++|||+++++|.+++.... .+++.....++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~L---H~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 89999999999999997654 578899999999999999999 78999999999999999999999999999987653
Q ss_pred CCCC-cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-------------hHHHHHH
Q 001988 878 GEDE-STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------AKEQCLL 943 (985)
Q Consensus 878 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------~~~~~~~ 943 (985)
.... ........++..|+|||.+.+..++.++|+ |++|+.++++++|+.+........ .+....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADV-WSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISE 236 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhh-HHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCH
Confidence 2111 111223458899999999998889999999 999999999999887654321111 1223345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+.+++ .||..+|++||++.|+++
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhc
Confidence 566677 688899999999999975
No 275
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=3.5e-30 Score=279.45 Aligned_cols=238 Identities=23% Similarity=0.330 Sum_probs=196.8
Q ss_pred CccCCceeeccCceeEEEEEEcC--CcEEEEEEeccCC----------cchHHHHHHHHHHHHh-cCCCCeeeEEeeeec
Q 001988 727 NFAENNIIGIGGFGSVYRARLED--GVEIAIKVFHPQC----------ASTLKSFEAECEVIKN-IRHRNLVKIISSCSN 793 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~~--~~~vAvK~~~~~~----------~~~~~~~~~E~~il~~-l~h~niv~l~~~~~~ 793 (985)
+|+..+.||+|+||.||+|..+. ++.+|+|.+.... .....++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778899999999999999764 6789999885331 1223456778888865 799999999999999
Q ss_pred CCceEEEEeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 794 DDFKALVLEYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGH-STPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 794 ~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h-~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
++..++||||+++++|.+++.. ....+++..+++++.|++.|+.|| | ..+++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYL---HKEKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHh---ccCCceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999988743 345688999999999999999999 6 47899999999999999999999999
Q ss_pred ccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-------------
Q 001988 870 FGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------- 936 (985)
Q Consensus 870 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------- 936 (985)
||.+....... ......++..|+|||.+..+.++.++|+ |++|+.+++++++..+........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv-~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 233 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADV-WAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL 233 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHH-HHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC
Confidence 99998764332 2334568899999999998889999999 999999999999876644321110
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
....++.++.+++.+||+.||++||++.|+..+++
T Consensus 234 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11134678999999999999999999999999875
No 276
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=7.3e-31 Score=288.01 Aligned_cols=234 Identities=23% Similarity=0.285 Sum_probs=196.7
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.++++++||||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334467999999999999864 6889999998765555566789999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
++|.+++... .+++.++..++.|++.|++|| |+++|+||||||+||++++++.+||+|||++........ ...
T Consensus 104 ~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~ 176 (292)
T cd06658 104 GALTDIVTHT--RMNEEQIATVCLSVLRALSYL---HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRK 176 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCc
Confidence 9999988653 578999999999999999999 788999999999999999999999999999876542221 223
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh--------------hHHHHHHHHHHHHHHc
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~l~~l~~~c 952 (985)
...++..|+|||......++.++|+ |++|+++++++++..+........ .....++.+.+++.+|
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv-~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 255 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDI-WSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLM 255 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHH
Confidence 3468999999999988889999999 999999999999887654322111 1112456788999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITR 969 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~ 969 (985)
+..+|.+||++.|+++.
T Consensus 256 l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 256 LVREPSQRATAQELLQH 272 (292)
T ss_pred ccCChhHCcCHHHHhhC
Confidence 99999999999999975
No 277
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.4e-30 Score=290.94 Aligned_cols=234 Identities=16% Similarity=0.236 Sum_probs=188.6
Q ss_pred Cceeecc--CceeEEEEEE-cCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 731 NNIIGIG--GFGSVYRARL-EDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 731 ~~~ig~G--~~g~V~~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
.++||+| +|++||++.. .+|+.||+|+++.... .....+.+|+++++.++||||+++++++..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 7889999986 4889999999976532 234567889999999999999999999999999999999999
Q ss_pred CCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc-
Q 001988 806 NGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST- 883 (985)
Q Consensus 806 ~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~- 883 (985)
+|+|.+++... ...+++..+..++.|++.||+|| |+++|+||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 99999998754 34588999999999999999999 78999999999999999999999999998754432111110
Q ss_pred ----eeccccccccccccccccc--CccchhhhcccccccchhhhcccccccCcchhhh---------------------
Q 001988 884 ----MRTQTLATIGYMAPDEIFV--GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------------- 936 (985)
Q Consensus 884 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------------- 936 (985)
......++..|+|||++.. ..++.++|+ |++|+++++++++..++.......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di-wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI-YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhH-HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 1122346778999999876 458899999 999999999999887653211000
Q ss_pred ------------------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ------------------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ------------------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.......++.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00123457889999999999999999999986
No 278
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=6.2e-31 Score=287.80 Aligned_cols=235 Identities=21% Similarity=0.298 Sum_probs=191.5
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999865 789999999875422 2235678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++ ++|.+++......+++...+.++.||++||+|| |+++|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFC---HSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--
Confidence 96 588888876555789999999999999999999 789999999999999999999999999999986542221
Q ss_pred eecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhh-h-------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-A------------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-~------------------------- 936 (985)
......+++.|+|||.+.+.. ++.++|+ |++|+.+++++++..+....... .
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDM-WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHH-HHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 122345788999999887644 6889999 99999999999876542111000 0
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
......+++.+++++|+..||.+|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00113467789999999999999999999875
No 279
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.1e-32 Score=315.10 Aligned_cols=240 Identities=25% Similarity=0.306 Sum_probs=200.5
Q ss_pred HhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
.+-+++.+..||.|.||.||-|. .++|.-.|+|.++.+. ....+.+.+|..++..++|||+|++||+-..++..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 45567888999999999999998 5678889999887552 33456788999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
||||++|+|.+.+...+ ..++.....+..|++.|++|| |++|||||||||+||+++.+|.+|++|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~L---H~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYL---HEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHH---HhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 99999999999998764 556677777899999999999 89999999999999999999999999999999886542
Q ss_pred C--cceecccccccccccccccccCc---cchhhhcccccccchhhhcccccccCcch-------------hhhhHHHHH
Q 001988 881 E--STMRTQTLATIGYMAPDEIFVGE---LSLKRWVNDLLPVSLVEVVDKSLLSGEEK-------------HFAAKEQCL 942 (985)
Q Consensus 881 ~--~~~~~~~~gt~~y~aPE~~~~~~---~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------~~~~~~~~~ 942 (985)
. .......+||+.|||||++.+.. -..+.|+ |++||++.||++|+-++.... .+..|+...
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~Di-WslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls 1467 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADI-WSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLS 1467 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhh-hcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhh
Confidence 1 12234567999999999987533 3456677 999999999999987665432 223456677
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 943 LSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 943 ~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+-.+++.+|+..||++|.++.|+++
T Consensus 1468 ~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1468 SEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 88899999999999999998887654
No 280
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=1.8e-30 Score=283.74 Aligned_cols=245 Identities=23% Similarity=0.309 Sum_probs=199.0
Q ss_pred CHHHHHHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeec-
Q 001988 717 SYFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSN- 793 (985)
Q Consensus 717 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~- 793 (985)
+..++..+.+.|+..+.||+|+||.||+|... +++.||+|.+.... ....++..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555567788999999999999999999864 78899999986542 3346788999999998 69999999999853
Q ss_pred -----CCceEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEE
Q 001988 794 -----DDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHL 867 (985)
Q Consensus 794 -----~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl 867 (985)
.+..++||||+++|+|.+++... ...+++..+..++.|++.|++|| |+.+|+||||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL---HAHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEE
Confidence 45789999999999999998764 34578888899999999999999 7899999999999999999999999
Q ss_pred ecccCceeccCCCCcceecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcchhhh------
Q 001988 868 SDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------ 936 (985)
Q Consensus 868 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------ 936 (985)
+|||++........ ......|++.|+|||.+. ...++.++|+ |++|+.+++++++..+........
T Consensus 163 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dv-wslG~~l~el~~g~~p~~~~~~~~~~~~~~ 239 (282)
T cd06636 163 VDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDI-WSLGITAIEMAEGAPPLCDMHPMRALFLIP 239 (282)
T ss_pred eeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccch-hHHHHHHHHHHhCCCCccccCHHhhhhhHh
Confidence 99999876532111 123356899999999875 3557788999 999999999999887653321110
Q ss_pred -------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....++.++.+++.+||+.+|.+||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 240 RNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11235678999999999999999999999875
No 281
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=3.7e-30 Score=279.91 Aligned_cols=242 Identities=25% Similarity=0.395 Sum_probs=193.7
Q ss_pred ccCCceeeccCceeEEEEEEc----CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC------
Q 001988 728 FAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD------ 795 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~------ 795 (985)
|...+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999753 46889999987653 233567889999999999999999999886532
Q ss_pred ceEEEEeccCCCChHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecc
Q 001988 796 FKALVLEYMSNGSLEDCLHSS-----NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDF 870 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~Df 870 (985)
..++++||+++|+|.+++... ...+++....+++.|++.|++|| |+.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887532 22478889999999999999999 7899999999999999999999999999
Q ss_pred cCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcchhhh------------h
Q 001988 871 GMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEEKHFA------------A 937 (985)
Q Consensus 871 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~~~~~------------~ 937 (985)
|.++...............+++.|++||.+....++.++|+ |++|++++++++ +..+........ .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi-~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 236 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDV-WAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQ 236 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhh-HHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 99987643322222223346678999999998889999999 999999999987 544432221110 1
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 001988 938 KEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKI 973 (985)
Q Consensus 938 ~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i 973 (985)
+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 237 ~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 237 PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 123457899999999999999999999999999876
No 282
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=3.6e-30 Score=282.77 Aligned_cols=236 Identities=22% Similarity=0.326 Sum_probs=192.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||+|+||.||+|..+ +++.||+|.+...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67888999999999999999875 7899999998754322 234567899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++ +|.+++......+++.....++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-- 158 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYC---HQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-- 158 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc--
Confidence 974 99999887666789999999999999999999 789999999999999999999999999999876432111
Q ss_pred eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhh-hh------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-AA------------------------ 937 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-~~------------------------ 937 (985)
......++..|+|||.+.+ ..++.++|+ |++|+++++++++..+....... ..
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv-~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDM-WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHH-HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 1122346889999998875 457889999 99999999999987655322100 00
Q ss_pred ------------H-----HHHH--HHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ------------K-----EQCL--LSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ------------~-----~~~~--~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+ .... .+..+++.+|++.+|++||++.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0011 56779999999999999999999875
No 283
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.1e-31 Score=278.33 Aligned_cols=236 Identities=22% Similarity=0.273 Sum_probs=202.9
Q ss_pred CccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
=|...+-||+|.|+.|-+|++ -+|.+||||++.+.... ....+.+|++.|+.++|||||++|++.......|+|+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 355566799999999999985 48999999999876443 345788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE-cCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL-DEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill-~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
-++|+|+||+.++...+.+....+++.||+.|+.|+ |...+||||+||+||.+ .+-|-|||.|||++..+.+.
T Consensus 99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YC---HqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--- 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYC---HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--- 172 (864)
T ss_pred cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHH---hhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc---
Confidence 999999999998887899999999999999999999 67789999999999877 56789999999999887432
Q ss_pred ceecccccccccccccccccCccch-hhhcccccccchhhhcccccccCcchhh-----------hhHHHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSL-KRWVNDLLPVSLVEVVDKSLLSGEEKHF-----------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~-~~dv~~~~g~~~~~i~~~~~~~~~~~~~-----------~~~~~~~~~l~~l~~ 950 (985)
......||+..|-|||++.+..|.. +.|+ |++|+.++.++-|..++....+. ..+..+..+..++|.
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDi-WSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDI-WSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQ 251 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhh-hHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHH
Confidence 2345678999999999999999875 5566 99999999999998877654322 234456788999999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
.|+..||++|.+..||+..
T Consensus 252 sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHhcCchhhccHHHHhcc
Confidence 9999999999999998753
No 284
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=1.4e-30 Score=285.39 Aligned_cols=236 Identities=25% Similarity=0.358 Sum_probs=194.3
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|+..+.||+|+||.||+|..+ +++.||+|++...... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999975 6899999998654322 34568899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++++++.++..... .+++..+..++.|+++|++|| |+.+++|||++|+||++++++.+||+|||++..+.....
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~L---H~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 155 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-
Confidence 999998888766543 589999999999999999999 788999999999999999999999999999987643321
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------------- 936 (985)
......++..|+|||.+.+ ..++.++|+ |++|+.++++++|..+........
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 156 -VYTDYVATRWYRAPELLVGDTKYGRAVDI-WAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred -ccCcccceeeccCcHHhccccccCchHhH-HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 2233458899999998875 446788999 999999999999875443211100
Q ss_pred -----------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -----------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -----------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.....+..+.+++.+||..+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00123567889999999999999999999875
No 285
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.3e-31 Score=310.10 Aligned_cols=241 Identities=25% Similarity=0.310 Sum_probs=188.5
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeec-------
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSN------- 793 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~------- 793 (985)
+...+|.+.+.||+||||.||+++.+ ||+.||||++.... ......+.+|+..+++++|||||+|+..|.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34567778889999999999999977 99999999998664 2234567899999999999999999865410
Q ss_pred ------------------------------------------------C-------------------------------
Q 001988 794 ------------------------------------------------D------------------------------- 794 (985)
Q Consensus 794 ------------------------------------------------~------------------------------- 794 (985)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001988 795 ---------------------------------DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHF 841 (985)
Q Consensus 795 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~ 841 (985)
...||.||||+..++.+.++.+...-.....++++++|++||+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI-- 713 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI-- 713 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH--
Confidence 124688999999888888877643324667788999999999999
Q ss_pred cCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc----------------CCCCcceecccccccccccccccccCc-
Q 001988 842 GHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS----------------GEDESTMRTQTLATIGYMAPDEIFVGE- 904 (985)
Q Consensus 842 ~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~- 904 (985)
|++|||||||||.||++|+++.|||+|||+|+... ........+..+||.-|+|||.+.+..
T Consensus 714 -H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 714 -HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred -HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 89999999999999999999999999999998721 011122456678999999999987654
Q ss_pred --cchhhhcccccccchhhhcccccccC-------------cchhh-hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 905 --LSLKRWVNDLLPVSLVEVVDKSLLSG-------------EEKHF-AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 905 --~~~~~dv~~~~g~~~~~i~~~~~~~~-------------~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
|+.+.|+ |++|++++||+.. +.+. ..|.. .........-.++++.+++.||.+||||.|++.
T Consensus 793 ~~Yn~KiDm-YSLGIVlFEM~yP-F~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 793 NKYNSKIDM-YSLGIVLFEMLYP-FGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ccccchhhh-HHHHHHHHHHhcc-CCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 9999999 9999999999865 2111 11111 111223444577999999999999999999874
No 286
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=4.7e-30 Score=281.83 Aligned_cols=238 Identities=22% Similarity=0.294 Sum_probs=192.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++++|...+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999864 7899999998755322 2346788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||++ +++.+++......+.+.....++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYI---HGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9995 688777765545678888899999999999999 788999999999999999999999999999876432221
Q ss_pred cceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhh-hh----------------------
Q 001988 882 STMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-AA---------------------- 937 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-~~---------------------- 937 (985)
......+++.|+|||.+.+. .++.++|+ |++|+++++++++..+....... ..
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGATDYSSALDI-WGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred --CCCCccccccccCCceeecCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 12234578899999988753 57888999 99999999999988754321100 00
Q ss_pred ---------------H------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ---------------K------EQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ---------------~------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
. ...+.++.+++.+|+..||++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 001356788999999999999999999874
No 287
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.1e-30 Score=282.70 Aligned_cols=235 Identities=23% Similarity=0.331 Sum_probs=198.9
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
+|+..+.||+|+||.||+|..+ +++.||+|.+..... ....++.+|++++++++||||+++++++...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677788999999999999876 688999999876533 34567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++++|.+++......+++....+++.|+++|++|+ |+ .+++||||||+||++++++.+||+|||.+........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 156 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYL---HEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-- 156 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---cCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence 99999999987655788999999999999999999 78 9999999999999999999999999999876532211
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch----h-h------------hhHH-HHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK----H-F------------AAKE-QCLLSI 945 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~----~-~------------~~~~-~~~~~l 945 (985)
....++..|+|||.+.+..++.++|+ |++|+++++++++..+..... . . ..+. ..+.++
T Consensus 157 --~~~~~~~~y~~PE~~~~~~~~~~~Dv-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd06605 157 --KTFVGTSSYMAPERIQGNDYSVKSDI-WSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDF 233 (265)
T ss_pred --hcccCChhccCHHHHcCCCCCchhhH-HHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHH
Confidence 12568899999999999999999999 999999999999876553321 0 0 0111 156779
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+++.+||..+|++||++.++++.
T Consensus 234 ~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 234 QDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHHcCCCchhCcCHHHHhhC
Confidence 999999999999999999998753
No 288
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=2.5e-30 Score=285.99 Aligned_cols=242 Identities=21% Similarity=0.258 Sum_probs=196.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+|+++++.++||||+++++++..+++.++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999865 678999999876532 23456789999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC-
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED- 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~- 880 (985)
||++|++|.+++...+ .+++.....++.|++.|++|| |+.+++||||||+||+++.++.+|++|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYL---HNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999999997654 678899999999999999999 78999999999999999999999999999986421100
Q ss_pred ------------CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------
Q 001988 881 ------------ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------ 936 (985)
Q Consensus 881 ------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------ 936 (985)
.........++..|+|||.+....++.++|+ |++|+++++++++..+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDW-WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 235 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC
Confidence 0001112357889999999988899999999 899999999999887654221110
Q ss_pred --hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 937 --AKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 937 --~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
....++.++.+++.+||+.+|++||++.++.+.++.
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 011246779999999999999999997655555543
No 289
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.2e-30 Score=284.43 Aligned_cols=246 Identities=24% Similarity=0.305 Sum_probs=199.0
Q ss_pred cCHHHHHHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeec
Q 001988 716 FSYFELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSN 793 (985)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~ 793 (985)
+.+.++..++++|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 334555567889999999999999999999864 78899999986542 2346678899999999 89999999999865
Q ss_pred C-----CceEEEEeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcE
Q 001988 794 D-----DFKALVLEYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 865 (985)
Q Consensus 794 ~-----~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~ 865 (985)
. +..++||||+++|+|.++++. ....+++..++.++.|++.||+|| |+.+++||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL---HNNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCE
Confidence 3 357999999999999998863 244688999999999999999999 78999999999999999999999
Q ss_pred EEecccCceeccCCCCcceecccccccccccccccccC-----ccchhhhcccccccchhhhcccccccCcchhh-----
Q 001988 866 HLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVG-----ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----- 935 (985)
Q Consensus 866 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----- 935 (985)
||+|||++........ ......++..|+|||.+... .++.++|+ |++|+.++++++|+.+.......
T Consensus 168 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di-~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 168 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDV-WSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred EEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccch-HHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 9999999887542221 12234588999999987543 35789999 99999999999988654432111
Q ss_pred ---------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 ---------AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 ---------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..++.....+.+++.+||..+|++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 245 IPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 112234567889999999999999999999875
No 290
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=8.7e-31 Score=288.17 Aligned_cols=231 Identities=23% Similarity=0.292 Sum_probs=195.2
Q ss_pred CceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 731 NNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
...||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 456999999999999864 7899999998765545566788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 889 (985)
.+++... .+++..+..++.|++.||+|| |+.+++||||||+||+++.++.+||+|||++..+.... .......
T Consensus 106 ~~~~~~~--~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~ 178 (297)
T cd06659 106 TDIVSQT--RLNEEQIATVCESVLQALCYL---HSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSLV 178 (297)
T ss_pred HHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--cccccee
Confidence 9987653 578999999999999999999 78999999999999999999999999999987654222 1223356
Q ss_pred cccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh--------------hHHHHHHHHHHHHHHccCC
Q 001988 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------AKEQCLLSIFSLALECTME 955 (985)
Q Consensus 890 gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~l~~l~~~cl~~ 955 (985)
+++.|+|||.+.+..++.++|+ |++|+.++++++++.+........ .....+..+.+++.+|+..
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 257 (297)
T cd06659 179 GTPYWMAPEVISRTPYGTEVDI-WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTR 257 (297)
T ss_pred cCccccCHHHHccCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcC
Confidence 8999999999998899999999 999999999999887643221111 1112356789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 001988 956 SPEKRIDAKDTITR 969 (985)
Q Consensus 956 ~P~~RPt~~ev~~~ 969 (985)
+|++||++.++++.
T Consensus 258 ~P~~Rps~~~ll~~ 271 (297)
T cd06659 258 EPQERATAQELLDH 271 (297)
T ss_pred CcccCcCHHHHhhC
Confidence 99999999999984
No 291
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=5e-30 Score=279.46 Aligned_cols=235 Identities=25% Similarity=0.332 Sum_probs=198.1
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
-|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667788999999999999864 78899999886442 233467889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... .+++.....++.|++.|++|| |+.|++|+||||+||+++.++.++++|||++..+.... ..
T Consensus 85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06641 85 GGGSALDLLEPG--PLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---ccCCeecCCCCHHhEEECCCCCEEEeecccceecccch--hh
Confidence 999999998753 578999999999999999999 89999999999999999999999999999987764322 11
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHHHHHc
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSLALEC 952 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l~~~c 952 (985)
.....++..|+|||.+....++.++|+ |++|+.+++++++..+........ ....++.++.+++.+|
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADI-WSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhH-HHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHH
Confidence 223458889999999988888999999 999999999999987654322111 1123457799999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITR 969 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~ 969 (985)
++.+|.+||++.++++.
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999984
No 292
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2.9e-30 Score=279.93 Aligned_cols=237 Identities=24% Similarity=0.383 Sum_probs=197.5
Q ss_pred CccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc------chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 727 NFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA------STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~------~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
+|+..+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999985 5789999999875421 124678899999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-cEEEecccCceeccC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAKLLSG 878 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-~~kl~DfGla~~~~~ 878 (985)
||||+++++|.+++...+ .+++..+..++.|++.||+|| |++|++||||||+||+++.++ .+||+|||.+..+..
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~L---H~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYL---HENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999997654 678999999999999999999 789999999999999998776 699999999887653
Q ss_pred CCCc--ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh----------------hhHHH
Q 001988 879 EDES--TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----------------AAKEQ 940 (985)
Q Consensus 879 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----------------~~~~~ 940 (985)
.... .......++..|+|||.+.+..++.++|+ |++|++++++++++.+....... ..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDV-WSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEH 235 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccch-HHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchh
Confidence 3211 11223468899999999988888999999 99999999999988765432111 11223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+.++.+++.+|+..+|++||++.|+++
T Consensus 236 ~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 236 LSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 5577899999999999999999999874
No 293
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=5.9e-30 Score=283.24 Aligned_cols=233 Identities=26% Similarity=0.312 Sum_probs=194.4
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
..|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778899999999999999865 789999999864422 23456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||++ |++.+.+......+++..+..++.|++.||.|| |+.+|+||||+|+||++++++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~L---H~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYL---HSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 9996 578777765555789999999999999999999 7899999999999999999999999999998765321
Q ss_pred cceecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcchh-------------hhhHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-------------FAAKEQCLLSI 945 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-------------~~~~~~~~~~l 945 (985)
....+++.|+|||.+. .+.++.++|+ |++|+.++++++|..+...... ......++.++
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv-~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDV-WSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYF 243 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccch-HHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHH
Confidence 1245888999999874 4668889999 9999999999998865432111 01123466789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+++.+||+.+|++||++.+++..
T Consensus 244 ~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 244 RNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHHhcCChhhCcCHHHHhcC
Confidence 999999999999999999999874
No 294
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=3.3e-30 Score=283.04 Aligned_cols=236 Identities=27% Similarity=0.335 Sum_probs=200.3
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
++|...+.||+|+||.||+|... ++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 67888899999999999999854 78899999987654555677899999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++++|.+++... .+++..+..++.|++.|+.|| |+.|++||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~L---H~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~ 171 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 171 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--c
Confidence 999999998764 468889999999999999999 799999999999999999999999999999876543222 2
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch--------------hhhhHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK--------------HFAAKEQCLLSIFSLAL 950 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~l~~l~~ 950 (985)
.....+++.|+|||.+..+.++.++|+ |++|+.+++++++..+..... ....++..+..+.+++.
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv-~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDI-WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhH-HHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence 233468899999999988889999999 999999999999886543221 11122334567889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
+||..+|.+||++.+++..
T Consensus 251 ~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999875
No 295
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=3.8e-30 Score=286.41 Aligned_cols=231 Identities=20% Similarity=0.286 Sum_probs=181.4
Q ss_pred CceeeccCceeEEEEEEc---CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCceEEEEeccC
Q 001988 731 NNIIGIGGFGSVYRARLE---DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFKALVLEYMS 805 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 805 (985)
+.+||+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 468999999999999865 45789999987542 23467899999999999999999999854 457789999996
Q ss_pred CCChHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----cCCCcEEEecccCc
Q 001988 806 NGSLEDCLHSS--------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL----DEDMVAHLSDFGMA 873 (985)
Q Consensus 806 ~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill----~~~~~~kl~DfGla 873 (985)
++|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||++ ++++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 4787776422 22478889999999999999999 78999999999999999 56789999999999
Q ss_pred eeccCCCCc-ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhh----------------
Q 001988 874 KLLSGEDES-TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------- 935 (985)
Q Consensus 874 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------- 935 (985)
+.+...... .......+|+.|+|||.+.+ ..++.++|+ |++|+++++++++..++......
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di-wSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI-WAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHH-HhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 876433221 12234568999999999876 457889999 99999999999988664321100
Q ss_pred -----------h---------h-HH---------------------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 -----------A---------A-KE---------------------QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 -----------~---------~-~~---------------------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
. . .. .....+.+++.+|+..||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0 00 01234778999999999999999999875
No 296
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=3.8e-30 Score=282.32 Aligned_cols=232 Identities=26% Similarity=0.306 Sum_probs=196.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888899999999999999865 68999999986542 223466889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++++|.+++.... .+++..+..++.|+++||+|| |+.|++||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYL---HSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 9999999999997763 688999999999999999999 7899999999999999999999999999999876432
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLAL 950 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~ 950 (985)
.....+++.|+|||.+.....+.++|+ |++|+++++++++..+........ .+...+..+.+++.
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 230 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDW-WALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIR 230 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHH
Confidence 233468999999999988888899999 999999999999887654332111 11224577899999
Q ss_pred HccCCCCCCCC-----CHHHHH
Q 001988 951 ECTMESPEKRI-----DAKDTI 967 (985)
Q Consensus 951 ~cl~~~P~~RP-----t~~ev~ 967 (985)
+||..+|.+|| ++.|++
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 231 NLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred HHccCCHHHccCcccCCHHHHH
Confidence 99999999999 666665
No 297
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=3.2e-30 Score=282.05 Aligned_cols=234 Identities=24% Similarity=0.283 Sum_probs=196.9
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
.|...+.||+|++|.||+|... +++.||+|++........+.+.+|+.++++++||||+++++++...++.++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3455678999999999999864 788999999876554555678899999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+++|.+++.. ..+++..+..++.|++.|++|| |++|++||||+|+||+++.++.++++|||.+....... ...
T Consensus 100 ~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~~~ 172 (285)
T cd06648 100 GGALTDIVTH--TRMNEEQIATVCLAVLKALSFL---HAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--PRR 172 (285)
T ss_pred CCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC--ccc
Confidence 9999999887 3578999999999999999999 78999999999999999999999999999887653222 122
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh--------------hhHHHHHHHHHHHHHH
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQCLLSIFSLALE 951 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~~~~l~~l~~~ 951 (985)
....|++.|+|||...+..++.++|+ |++|+++++++++..+....... .....++..+.+++.+
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDI-WSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDR 251 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccH-HHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHH
Confidence 33458999999999988889999999 99999999999987654321100 0111245789999999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 001988 952 CTMESPEKRIDAKDTIT 968 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~ 968 (985)
||..+|++||++.++++
T Consensus 252 ~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 252 MLVRDPAQRATAAELLN 268 (285)
T ss_pred HcccChhhCcCHHHHcc
Confidence 99999999999999986
No 298
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=5.7e-30 Score=274.51 Aligned_cols=235 Identities=31% Similarity=0.418 Sum_probs=201.8
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
+|...+.||+|++|.||+|... +++.||+|++........+.+.+|++++++++|++++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4677889999999999999975 788999999987655566789999999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+++|.+++......+++..+..++.|+++|++|| |++|++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYL---HSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHh---hcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 9999999987655789999999999999999999 789999999999999999999999999999987643321 2
Q ss_pred cccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh--------------hHHHHHHHHHHHHHH
Q 001988 886 TQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------AKEQCLLSIFSLALE 951 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~l~~l~~~ 951 (985)
....++..|+|||.+....++.+.|+ |++|+++++++++..+........ ....++.++.+++.+
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADI-WSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKK 233 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccH-HHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHH
Confidence 34468899999999988888999999 999999999999886554331110 111125779999999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 001988 952 CTMESPEKRIDAKDTIT 968 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~ 968 (985)
|+..+|++||++.|+++
T Consensus 234 ~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 234 CLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HccCChhhCCCHHHHhc
Confidence 99999999999999875
No 299
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=4.7e-30 Score=279.22 Aligned_cols=238 Identities=24% Similarity=0.329 Sum_probs=196.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCC------
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDD------ 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~------ 795 (985)
++++|+..+.||+|+||.||+|..+ +++.||+|++.... ...+.+.+|+++++++ +|+||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5688999999999999999999975 67899999987653 3446789999999999 6999999999997644
Q ss_pred ceEEEEeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 796 FKALVLEYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
..++||||+++++|.+++... +..+++..+..++.|+++||+|| |+.+++||||+|+||++++++.+||+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL---HENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 489999999999999988653 35789999999999999999999 899999999999999999999999999999
Q ss_pred ceeccCCCCcceeccccccccccccccccc-----CccchhhhcccccccchhhhcccccccCcchh-------------
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFV-----GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH------------- 934 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~------------- 934 (985)
+....... .......+++.|+|||.+.. ..++.++|+ |++|+++++++++..+......
T Consensus 160 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 160 SAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDV-WSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred ceecccch--hhhcCccccccccCHhHhcccccccCCccccccH-HHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 88754222 22233458999999998753 346778999 9999999999998876543211
Q ss_pred -hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 935 -FAAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 935 -~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...+...+.++.+++.+|+..||++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 237 TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1112235568899999999999999999999975
No 300
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=6.2e-30 Score=276.55 Aligned_cols=237 Identities=25% Similarity=0.358 Sum_probs=202.7
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++|+|++++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999876 699999999886644 3457889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
+++++|.+++... ..+++..+..++.|+++|++|+ |+ .+++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~l---h~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYL---HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---hccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 9999999999865 4689999999999999999999 88 99999999999999999999999999999876432221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch---hh------------hhHHH-HHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---HF------------AAKEQ-CLLSIF 946 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~---~~------------~~~~~-~~~~l~ 946 (985)
.....++..|+|||.+....++.++|+ |++|+++++++++..+..... .. ..+.. +++.+.
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv-~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (264)
T cd06623 157 --CNTFVGTVTYMSPERIQGESYSYAADI-WSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFR 233 (264)
T ss_pred --ccceeecccccCHhhhCCCCCCchhhH-HHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHH
Confidence 123458889999999999999999999 999999999999876654331 01 11122 567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 001988 947 SLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+++.+|+..+|++||++.++++.
T Consensus 234 ~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 234 DFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHccCChhhCCCHHHHHhC
Confidence 99999999999999999999874
No 301
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=4.5e-30 Score=282.35 Aligned_cols=236 Identities=24% Similarity=0.294 Sum_probs=192.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~lv 800 (985)
++|+..+.||+|+||.||+|..+ +++.||+|.++..... ....+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888899999999999999976 6889999998754322 234567899999999999999999999877 889999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||++ ++|.+.+......+++.....++.|++.||+|| |+.+++||||||+||+++.++.+||+|||+++.+....
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHL---HDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99997 599999887655789999999999999999999 78999999999999999999999999999998765332
Q ss_pred CcceecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhhhh----------------------
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA---------------------- 937 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~---------------------- 937 (985)
. ......+++.|+|||.+.+.. ++.++|+ |++|+.+++++++..+.........
T Consensus 161 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di-~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 K--PYTQLVVTLWYRAPELLLGAKEYSTAIDM-WSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred c--ccccccccccccCchhhcCCccccchhhH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 1 122345788999999887544 5788999 9999999999998765432111000
Q ss_pred -------------------HHH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -------------------KEQ--CLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -------------------~~~--~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
... ..+.+.+++++|++.+|++||++.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 2566889999999999999999999975
No 302
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=5.9e-30 Score=277.00 Aligned_cols=237 Identities=24% Similarity=0.265 Sum_probs=193.2
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-----chHHHHHHHHHHHHhcCCCCeeeEEeeeecC--Cce
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-----STLKSFEAECEVIKNIRHRNLVKIISSCSND--DFK 797 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~ 797 (985)
.+|...+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999864 689999998864321 1245678899999999999999999998764 467
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++++|.+++.... .+++....+++.|++.||+|| |+.+++||||||+||++++++.+||+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYL---HSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 89999999999999987653 578888999999999999999 78999999999999999999999999999988654
Q ss_pred CCCCc-ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh-------------hhhHHHHHH
Q 001988 878 GEDES-TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-------------FAAKEQCLL 943 (985)
Q Consensus 878 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-------------~~~~~~~~~ 943 (985)
..... .......++..|+|||.+.+..++.++|+ |++|+.++++++++.+...... ...+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADI-WSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSD 236 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhH-HHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCH
Confidence 22111 11223458899999999988889999999 9999999999998876543211 112233456
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+.+++.+|+. +|++||++.|+++
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 78889999994 9999999999875
No 303
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=277.81 Aligned_cols=232 Identities=23% Similarity=0.280 Sum_probs=195.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
.+.|+.-++||+||||+||-++.+ +|+.||+|.+.++. ........+|-.|+++++.+.||.+-.+|++.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356778899999999999999855 89999999986542 22345578899999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 801 LEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
+..|.||+|.-++...+ ..+++....-+|.+|+.||++| |+.+||+||+||+|||+|+.|+++|+|.|+|..+.+.
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl---H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL---HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH---HhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999998887653 4689999999999999999999 8999999999999999999999999999999998644
Q ss_pred CCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh---------------HHHHHHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA---------------KEQCLLS 944 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~ 944 (985)
.. ....+||.+|||||++..+.|++..|. |++|+.++||+.|+.++.....-.. ++..+++
T Consensus 341 ~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dw-f~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~e 416 (591)
T KOG0986|consen 341 KP---IRGRVGTVGYMAPEVLQNEVYDFSPDW-FSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEE 416 (591)
T ss_pred Cc---cccccCcccccCHHHHcCCcccCCccH-HHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHH
Confidence 33 234579999999999999999988876 9999999999999876654321111 1234567
Q ss_pred HHHHHHHccCCCCCCCCCH
Q 001988 945 IFSLALECTMESPEKRIDA 963 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~ 963 (985)
..++.+..+..||++|-.-
T Consensus 417 akslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 417 AKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHHHHHHccCHHHhccC
Confidence 7788888899999888643
No 304
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=5.1e-30 Score=277.28 Aligned_cols=237 Identities=28% Similarity=0.348 Sum_probs=198.9
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|+||.||+|... +++.||+|.++..... ..+.+..|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999864 7899999998766443 567889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|.+++.... .+++..+..++.|+++|++|| |+.|++||||+|+||++++++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYL---HSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999999998753 578889999999999999999 78999999999999999999999999999998765433221
Q ss_pred e--ecccccccccccccccccCc---cchhhhcccccccchhhhcccccccCcch-h--------------hhhHHHHHH
Q 001988 884 M--RTQTLATIGYMAPDEIFVGE---LSLKRWVNDLLPVSLVEVVDKSLLSGEEK-H--------------FAAKEQCLL 943 (985)
Q Consensus 884 ~--~~~~~gt~~y~aPE~~~~~~---~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-~--------------~~~~~~~~~ 943 (985)
. .....+++.|+|||.+.... .+.++|+ |++|+.+++++++..+..... . .+....++.
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv-~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI-WSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSP 235 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccch-HHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCH
Confidence 1 12345788999999988766 7889999 999999999999887653221 0 011112367
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+.+++.+||+.+|.+||++.|++.
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 7889999999999999999999874
No 305
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=6.5e-30 Score=275.04 Aligned_cols=235 Identities=24% Similarity=0.351 Sum_probs=196.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999864 78889999987542 23456788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCceeccCCCC
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla~~~~~~~~ 881 (985)
+++++|.+++... +..+++..+.+++.+++.|++|| |++|++||||||+||+++++ +.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHV---HTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999865 34588999999999999999999 78999999999999999855 4689999999987643221
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh------------hhhHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH------------FAAKEQCLLSIFSLA 949 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~------------~~~~~~~~~~l~~l~ 949 (985)
.....++..|+|||.+....++.++|+ |++|++++++++++.+...... .+.++.++.++.+++
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv-~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 233 (256)
T cd08220 158 ---AYTVVGTPCYISPELCEGKPYNQKSDI-WALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLI 233 (256)
T ss_pred ---ccccccCCcccCchhccCCCCCcccch-HHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 223458899999999988888999999 9999999999987765433211 011223567799999
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~ 968 (985)
.+||..+|++||++.|+++
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHccCChhhCCCHHHHhh
Confidence 9999999999999999986
No 306
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=6.6e-30 Score=279.93 Aligned_cols=238 Identities=28% Similarity=0.361 Sum_probs=203.0
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.++.|...+.||+|+||.||+|..+ ++..||+|++..... ....+.+|++++++++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888889999999999999976 788999999976544 45778899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+++++|.+++......+++..+..++.|++.||+|| |+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYL---HSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence 9999999999987655789999999999999999999 789999999999999999999999999999876543221
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh--------------hhHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------AAKEQCLLSIFSL 948 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------~~~~~~~~~l~~l 948 (985)
......+++.|+|||.+.+..++.++|+ |++|+++++++++..+....... .....++.++.++
T Consensus 172 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv-~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 249 (286)
T cd06614 172 -KRNSVVGTPYWMAPEVIKRKDYGPKVDI-WSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDF 249 (286)
T ss_pred -hhccccCCcccCCHhHhcCCCCCCcccc-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHH
Confidence 1223457889999999988889999999 99999999999988654432111 1122256789999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~ 968 (985)
+.+|++.+|.+||++.++++
T Consensus 250 i~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 250 LNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHhccChhhCcCHHHHhh
Confidence 99999999999999999986
No 307
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=9.7e-30 Score=275.07 Aligned_cols=240 Identities=20% Similarity=0.300 Sum_probs=197.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeec--CCceEEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSN--DDFKALVL 801 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~--~~~~~lv~ 801 (985)
+|+..+.||.|+||.||+|... +++.||+|.+.... ....+++..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4777889999999999999854 78899999987542 2335578899999999999999999998754 45678999
Q ss_pred eccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 802 EYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGH--STPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 802 e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h--~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
||+++++|.+++... ...+++...+.++.|++.|++|||..+ +.+++||||||+||+++.++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998753 456899999999999999999993322 899999999999999999999999999999876
Q ss_pred cCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHHHHHH
Q 001988 877 SGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQCLLS 944 (985)
Q Consensus 877 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~ 944 (985)
..... ......+++.|+|||.+....++.++|+ |++|+.+++++++..+....... ..+...+.+
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDI-WSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSE 237 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHH-HHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHH
Confidence 43221 1233468999999999998889999999 99999999999987665433111 112335678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 945 IFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+.+++.+|+..+|++||++.++++.
T Consensus 238 ~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 238 LNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHccCCcccCCCHHHHhhC
Confidence 9999999999999999999999863
No 308
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=3.9e-30 Score=282.04 Aligned_cols=237 Identities=25% Similarity=0.341 Sum_probs=195.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|+..+.||+|+||.||+|..+ +++.||+|+++... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888899999999999999875 68899999987542 2234678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++++.+..+... ...+++.+...++.|++.|++|| |+.+++|||++|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 81 YVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYC---HSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc
Confidence 9998766655544 34588999999999999999999 7889999999999999999999999999999876543321
Q ss_pred ceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------------- 936 (985)
......++..|+|||.+... .++.++|+ |++|+++++++++..+........
T Consensus 157 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv-~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 157 -PLTDYVATRWYRAPELLVGDTNYGKPVDV-WAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred -cccCcccccCCcCCchhcCCCCcCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 22335688999999999888 88899999 999999999999876543211000
Q ss_pred ------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+..++.++.+++++||..+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00113677999999999999999999999875
No 309
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=6.8e-30 Score=278.45 Aligned_cols=235 Identities=23% Similarity=0.379 Sum_probs=196.6
Q ss_pred CccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCC-cchHHHHHHHHHHHHhcC---CCCeeeEEeeeecCCceEEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIR---HRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~---h~niv~l~~~~~~~~~~~lv~ 801 (985)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....++.+|+.++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 366778899999999999986 478999999987653 234567889999999996 999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++++|.+++... .+++.....++.|+++|+.|| |+.||+||||+|+||++++++.++++|||++..+.....
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYI---HKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999999998764 688999999999999999999 789999999999999999999999999999987753331
Q ss_pred cceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh------------h-HHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------A-KEQCLLSIFS 947 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~-~~~~~~~l~~ 947 (985)
......|+..|+|||.+..+ .++.++|+ |++|+++++++++..+........ . ....+.++.+
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 157 --KRSTFVGTPYWMAPEVITEGKYYDTKADI-WSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLRE 233 (277)
T ss_pred --ccccccCCcceeCHHHhccCCccccchhH-HHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHH
Confidence 22334689999999988754 45789999 999999999999887654332111 0 1125678999
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 001988 948 LALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++.+||+.+|++||++.|+++.
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999763
No 310
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=3.2e-30 Score=283.18 Aligned_cols=238 Identities=26% Similarity=0.305 Sum_probs=203.0
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
....|.....||+|.|+.|.+|++. ++..||||.+++.... ....+.+|+++|+.++|||||+++.+.......|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 4567888899999999999999865 7999999999876333 335588999999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+.+|.+++++...+...+ .....++.|+.+|++|+ |+++|||||||++||+++.++.+||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYc---H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYC---HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--- 206 (596)
T ss_pred EEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHH---hhcceeccccchhhcccccccceeeeccccceeec---
Confidence 999999999999998874444 77888999999999999 89999999999999999999999999999999985
Q ss_pred CcceecccccccccccccccccCccc-hhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELS-LKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSL 948 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l 948 (985)
........+|++.|.|||.+.+.++. +..|+ |++|++++.++.|.+++....-.. .+.-...+..++
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~-Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~l 285 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDI-WSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDL 285 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceeh-hhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHH
Confidence 23334567899999999999988875 45566 999999999999998776542111 122234567889
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+++++-.+|.+|++.+++.+.
T Consensus 286 Lrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 286 LRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHHhhccCccccCCHHHhhhh
Confidence 999999999999999998764
No 311
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=5.3e-30 Score=280.38 Aligned_cols=235 Identities=24% Similarity=0.347 Sum_probs=191.3
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||.|+||.||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999865 7899999998754322 235788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
++ ++|.+++... ...+++..+..++.|+++|++|| |+.+++||||+|+||++++++.+||+|||+++.+.....
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---h~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 95 6899888754 34688999999999999999999 789999999999999999999999999999876532211
Q ss_pred ceecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhhhh------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------ 937 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------ 937 (985)
......+++.|+|||.+.+.. ++.++|+ |++|+.++++++++.+.........
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDI-WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred -ccccccccccccCCeEEecCCCCCcHHHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 122334788999999876644 5788999 9999999999998865432211000
Q ss_pred ----------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ----------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ----------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
......++.+++.+|++.||++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0012456778999999999999999999875
No 312
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=275.16 Aligned_cols=230 Identities=23% Similarity=0.353 Sum_probs=191.5
Q ss_pred CceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 731 NNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
.+.+|+|-||+||-|.++ +|+.||||++.+-.. ....++++|+.||+++.||.||.+...|++.+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 478999999999999854 899999999976533 23578899999999999999999999999999999999999554
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC---CcEEEecccCceeccCCCCcce
Q 001988 808 SLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED---MVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 808 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~---~~~kl~DfGla~~~~~~~~~~~ 884 (985)
=|+-.+.....++++.....+..||+.||.|| |-++|||+|+||+|||+... -.+||||||+|+.+. +...
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~L---H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg---EksF 722 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYL---HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG---EKSF 722 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHh---hhcceeeccCCchheeeccCCCCCceeeccccceeecc---hhhh
Confidence 44444555566788888888999999999999 78999999999999999543 479999999999974 3345
Q ss_pred ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-------------hHHHHHHHHHHHHHH
Q 001988 885 RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------AKEQCLLSIFSLALE 951 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------~~~~~~~~l~~l~~~ 951 (985)
...++|||.|.|||++..+.|...-|+ |+.|+.++--+.|.+++.++.+.. ...+...+.+++|..
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDM-WSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDM-WSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINN 801 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccc-eeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHH
Confidence 567889999999999999999999999 999999999999988877653322 233456677888888
Q ss_pred ccCCCCCCCCCHHHHH
Q 001988 952 CTMESPEKRIDAKDTI 967 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~ 967 (985)
.++.+=.+|.+..+-+
T Consensus 802 LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHHhcchHhhc
Confidence 8888878887776554
No 313
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2e-30 Score=278.94 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=197.9
Q ss_pred HhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccC--CcchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv 800 (985)
....|++.+.||+||.+.||++...+.+.||+|++... .......|.+|++.|.+++ |.+||++++|-..++..|||
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34567888999999999999999988889999987644 2334678999999999994 99999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||= ..+|..++.+.........++.+-.|++.|+.++ |.+||||.||||.|+++- +|.+||+|||+|..+....
T Consensus 439 mE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~I---H~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTI---HQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred eecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHH---HHhceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 9986 4599999998865555447788999999999999 899999999999999985 4789999999999987666
Q ss_pred CcceecccccccccccccccccCc-----------cchhhhcccccccchhhhcccccccCcchhhhh-------H----
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGE-----------LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-------K---- 938 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-------~---- 938 (985)
.......-+||+.||+||.+..-. .+.++|| |++||.+++|+-++.+++....... +
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDv-WSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDV-WSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEI 592 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccch-hhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccc
Confidence 555666778999999999886322 5688999 9999999999998877765431100 0
Q ss_pred ---H-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 939 ---E-QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 939 ---~-~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+ -...++.++|+.|+..||++||+..|+++
T Consensus 593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 0 01234899999999999999999999875
No 314
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=9.6e-30 Score=278.22 Aligned_cols=235 Identities=23% Similarity=0.316 Sum_probs=189.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHH-HHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEV-IKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~i-l~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|+..+.||+|+||.||+|+.. +|+.||+|+++.... ....++..|+.+ ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888899999999999999865 799999999876532 234456667665 556689999999999999999999999
Q ss_pred ccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 803 YMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHST-PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 803 ~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
|++ |+|.+++... ...+++..++.++.|++.|++|| |++ +++||||||+||+++.++.+||+|||++..+..
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL---HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6888777542 34689999999999999999999 676 999999999999999999999999999987532
Q ss_pred CCCcceeccccccccccccccccc----CccchhhhcccccccchhhhcccccccCcchh-hh-------------hHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFV----GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-FA-------------AKEQ 940 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-~~-------------~~~~ 940 (985)
.. ......++..|+|||.+.. ..++.++|+ |++|+.+++++++..+...... .. ..+.
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDV-WSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEK 232 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccc-hhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccc
Confidence 21 1223458889999998754 456788999 9999999999998876542110 00 0123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+++++.+++.+||..+|++||++.++++
T Consensus 233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 5678999999999999999999999986
No 315
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=1.1e-29 Score=282.50 Aligned_cols=239 Identities=25% Similarity=0.285 Sum_probs=197.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+..|++++++++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999875 5899999999765332 3456889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 802 EYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
||+++++|.+++... ...+++.....++.|+++||+|| |+.|++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYL---HLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999998764 34689999999999999999999 78999999999999999999999999999987653221
Q ss_pred Cc---------------------------ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch
Q 001988 881 ES---------------------------TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK 933 (985)
Q Consensus 881 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~ 933 (985)
.. .......|+..|+|||.+.+..++.++|+ |++|+++++++++..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di-~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDW-WTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHH-HHHHHHHHHHhhCCCCCCCCc
Confidence 10 01113358889999999998889999999 999999999999887653321
Q ss_pred hhh-------------hHHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 001988 934 HFA-------------AKEQCLLSIFSLALECTMESPEKRID----AKDTIT 968 (985)
Q Consensus 934 ~~~-------------~~~~~~~~l~~l~~~cl~~~P~~RPt----~~ev~~ 968 (985)
... .....++.+.+++.+|+..+|++||+ +.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 111 11114678999999999999999999 555554
No 316
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.2e-29 Score=277.99 Aligned_cols=235 Identities=26% Similarity=0.314 Sum_probs=194.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~lv~ 801 (985)
++|...+.||.|++|.||+|... +++.||+|.+..... ....++.+|++++++++||||+++++++.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36778899999999999999975 688899999875432 3456789999999999999999999998653 4689999
Q ss_pred eccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 802 EYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 802 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
||+++++|.+++.. ....++......++.|+++||+|| |+.+++||||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL---HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988653 244678889999999999999999 789999999999999999999999999999876532
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh-----hh-----------hH----
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-----FA-----------AK---- 938 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-----~~-----------~~---- 938 (985)
.. .....++..|+|||.+.+..++.++|+ |++|+.++++++|..+...... .. ..
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDV-WSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEP 232 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhH-HHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCC
Confidence 21 123457889999999999999999999 9999999999998876543310 00 00
Q ss_pred ---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 939 ---EQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 939 ---~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...++.+.+++.+||..+|.+||++.|+++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 233 GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 123467899999999999999999999987
No 317
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=2.9e-30 Score=278.26 Aligned_cols=233 Identities=26% Similarity=0.323 Sum_probs=198.4
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
+|+..+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999875 689999999975432 345678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+++++|.+++... ..+++.....++.|+++||+|| |+.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYL---HSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999876 4688999999999999999999 78899999999999999999999999999988754322
Q ss_pred ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh--------------hhhHHHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------------FAAKEQCLLSIFSL 948 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------------~~~~~~~~~~l~~l 948 (985)
......|+..|+|||.+....++.++|+ |++|+.++++++|..+...... ...+...+..+.++
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDW-WSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDA 232 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccc-hhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHH
Confidence 2233458889999999988889999999 9999999999998876554321 11122356789999
Q ss_pred HHHccCCCCCCCCCH--HHHH
Q 001988 949 ALECTMESPEKRIDA--KDTI 967 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~--~ev~ 967 (985)
+.+||+.+|.+||++ .|+.
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHccCChhHcCCccHHHHh
Confidence 999999999999999 5544
No 318
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=288.55 Aligned_cols=242 Identities=27% Similarity=0.342 Sum_probs=196.4
Q ss_pred ccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCCCCeeeEEeeeecCC------ceEE
Q 001988 728 FAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRHRNLVKIISSCSNDD------FKAL 799 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~------~~~l 799 (985)
+...+.||+||||.||+|+ .++|+.||||.++.... ...+...+|++++++++|+|||+++++-++.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3445779999999999999 55899999999987533 34567789999999999999999999876543 5679
Q ss_pred EEeccCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc--CCC--cEEEecccCc
Q 001988 800 VLEYMSNGSLEDCLHSS--NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD--EDM--VAHLSDFGMA 873 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~--~~~--~~kl~DfGla 873 (985)
|||||.||||+..+... ...+++.+.+.+..+++.||.|| |++|||||||||.||++- .+| ..||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~L---rEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHL---RENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHH---HHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999864 45699999999999999999999 899999999999999993 334 5899999999
Q ss_pred eeccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh----------------
Q 001988 874 KLLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------- 936 (985)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------- 936 (985)
+.++++. .....+||+.|.+||.+.. +.|+.-.|. |++|+.+++.++|.+++-......
T Consensus 172 rel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDL-WS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 172 RELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDL-WSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccCCCCC---eeeeecCchhhcChHHHhhccCcCceeeh-hhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 9886444 4566889999999999885 777888888 999999999999998654321110
Q ss_pred ------------------------hHHHHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHHHhHhh
Q 001988 937 ------------------------AKEQCLLSIFSLALECTMESPEKRI--DAKDTITRLLKIRDT 976 (985)
Q Consensus 937 ------------------------~~~~~~~~l~~l~~~cl~~~P~~RP--t~~ev~~~L~~i~~~ 976 (985)
........+-.+...++..+|.+|. ...+....+..|...
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 0112345566678888888899988 777777777776653
No 319
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=1.6e-29 Score=276.61 Aligned_cols=235 Identities=23% Similarity=0.327 Sum_probs=192.7
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
+|+..+.||.|++|.||+|+.. +|+.||||.++..... ....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999975 6889999998765332 3456788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 805 SNGSLEDCLHSSN--CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 805 ~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
++ +|.+++.... ..+++..+..++.|+++||+|| |+.|++||||||+||++++++.+|++|||+++.......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC---HENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 75 8988887543 4689999999999999999999 789999999999999999999999999999976532211
Q ss_pred ceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------------- 936 (985)
......+++.|+|||.+.+. .++.++|+ |++|+++++++++..+........
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv-~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDI-WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 12234578899999987654 46788999 999999999999876543221100
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..+..+..+.+++.+|++.+|.+||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00123466789999999999999999999875
No 320
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=1.4e-29 Score=278.63 Aligned_cols=236 Identities=22% Similarity=0.301 Sum_probs=189.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCc-----
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIR-HRNLVKIISSCSNDDF----- 796 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~----- 796 (985)
++|+..+.||+|+||.||+|... +++.||+|.++..... ....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999865 7899999998754322 2356888999999995 6999999999977665
Q ss_pred eEEEEeccCCCChHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-CCcEEEeccc
Q 001988 797 KALVLEYMSNGSLEDCLHSS----NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFG 871 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-~~~~kl~DfG 871 (985)
.++||||+++ ++.+++... ...+++...+.++.||+.||+|| |+++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC---HKHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 898887653 23579999999999999999999 7899999999999999998 8999999999
Q ss_pred CceeccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh--------------
Q 001988 872 MAKLLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------- 936 (985)
Q Consensus 872 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------- 936 (985)
+++.+...... .....+++.|+|||.+.+ ..++.++|+ |++|+.+++++++..+........
T Consensus 157 ~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di-~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDI-WSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHH-HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99876432211 122347889999998765 456889999 999999999999876543211000
Q ss_pred -------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..+..+.++.+++.+|+.++|.+||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00124567889999999999999999999875
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=1.9e-29 Score=271.60 Aligned_cols=237 Identities=27% Similarity=0.348 Sum_probs=202.0
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKALVL 801 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~lv~ 801 (985)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++.+... +..++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 789999999876542 3467889999999999999999999999988 8899999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
||+++++|.+++.... .+++..+..++.|++.|++|| |+.+++||||+|+||+++.++.+||+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l---h~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYL---HSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999998765 789999999999999999999 789999999999999999999999999999988754332
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch--------------hhhhHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK--------------HFAAKEQCLLSIFS 947 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~l~~ 947 (985)
........++..|+|||.......+.++|+ |++|+++++++++..+..... ....++..+..+.+
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADI-WSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHH
Confidence 112334568899999999988889999999 999999999999776543321 11122334678999
Q ss_pred HHHHccCCCCCCCCCHHHHHH
Q 001988 948 LALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~ 968 (985)
++.+|+..+|++||++.|++.
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhh
Confidence 999999999999999999985
No 322
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=1.9e-29 Score=271.51 Aligned_cols=236 Identities=24% Similarity=0.337 Sum_probs=201.3
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|...+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999865 689999999976533 4556788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 804 MSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 804 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
+++++|.+++... ...+++.....++.+++.|+.|| |+.|++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL---HSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999865 36789999999999999999999 78899999999999999999999999999998764332
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSL 948 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l 948 (985)
.......|++.|+|||......++.+.|+ |++|+.+++++.+..+........ .+..++.++.++
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv-~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDI-WSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNL 234 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccH-HHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 22334468999999999988889999999 999999999998876654331111 112355789999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~ 968 (985)
+.+|+..+|++||++.|+++
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999875
No 323
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=4e-29 Score=268.50 Aligned_cols=235 Identities=28% Similarity=0.385 Sum_probs=199.8
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777899999999999999865 678999999986643 3556789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+++++|.+++... ..+++..+..++.|++.|+.|| |+.|++||||||+||+++.++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYL---HEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 9999999998765 4689999999999999999999 8999999999999999999999999999999887533321
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSLALE 951 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l~~~ 951 (985)
.....++..|+|||...+..++.+.|+ |++|+.+++++++..+........ .+...++.+.+++.+
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv-~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDI-WSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhH-HHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHH
Confidence 233458899999999888888889999 999999999999876543321111 112345789999999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 001988 952 CTMESPEKRIDAKDTIT 968 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~ 968 (985)
|+..+|++||++.+++.
T Consensus 234 ~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 234 CFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHhCChhhCcCHHHHhc
Confidence 99999999999999874
No 324
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-31 Score=264.42 Aligned_cols=230 Identities=25% Similarity=0.257 Sum_probs=194.6
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
-++|...+++|+|.||.|.+++-+ +++.||+|++++..- .+......|-++|+..+||.+..+-..++..+..++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 356778889999999999999865 899999999987732 3344556799999999999999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+.||.|+-++...+ .+++....-+-..|+.||.|| |+++||+||+|.+|.|+|++|++||+|||+++.- ..
T Consensus 247 MeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YL---Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~--I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYL---HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE--IK 320 (516)
T ss_pred EEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhh---hhCCeeeeechhhhheeccCCceEeeecccchhc--cc
Confidence 99999999998887654 677777777899999999999 8899999999999999999999999999999762 23
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLA 949 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~ 949 (985)
........||||.|.|||++.+..|....|. |.+|++++||+-|++++....+.. .+....++...++
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDW-WG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLL 399 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDW-WGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLL 399 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeeh-hhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHH
Confidence 3345677899999999999999999887776 999999999999998776543222 1223456778899
Q ss_pred HHccCCCCCCCC
Q 001988 950 LECTMESPEKRI 961 (985)
Q Consensus 950 ~~cl~~~P~~RP 961 (985)
...+..||++|.
T Consensus 400 sGLL~kdP~kRL 411 (516)
T KOG0690|consen 400 SGLLKKDPKKRL 411 (516)
T ss_pred HHHhhcChHhhc
Confidence 999999999997
No 325
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9e-30 Score=302.79 Aligned_cols=248 Identities=26% Similarity=0.404 Sum_probs=205.8
Q ss_pred HhcCccCCceeeccCceeEEEEEEc----C----CcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeec
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE----D----GVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSN 793 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~----~----~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~ 793 (985)
..++....+.+|+|+||.|++|... . ...||||.++.... .+.+.+..|+++|+.+ +|+||+.++|+|..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 3344455669999999999999743 1 45699999986533 4567899999999999 69999999999999
Q ss_pred CCceEEEEeccCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 001988 794 DDFKALVLEYMSNGSLEDCLHSSN---------------CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVL 858 (985)
Q Consensus 794 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nil 858 (985)
++..++|+||++.|+|.++++..+ ..++..+.+.+++|||.|++|| ++.++||||+.++||+
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L---~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL---ASVPCVHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH---hhCCccchhhhhhhEE
Confidence 999999999999999999998876 3488899999999999999999 8999999999999999
Q ss_pred EcCCCcEEEecccCceeccCCCCcceeccc-ccccccccccccccCccchhhhcccccccchhhhccccc-ccCcc----
Q 001988 859 LDEDMVAHLSDFGMAKLLSGEDESTMRTQT-LATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSL-LSGEE---- 932 (985)
Q Consensus 859 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~-~~~~~---- 932 (985)
+.++..+||+|||+|+.....+.+...... .-...|||||.+....++.++|| |++|++++|+++... +....
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDV-WSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDV-WSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchh-hHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 999999999999999976544443322211 12445999999999999999999 999999999987432 22221
Q ss_pred ---------hhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 933 ---------KHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 933 ---------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
.+...|+.|.++++++|+.||+.+|++||++.++++.++...+
T Consensus 530 ~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 530 ELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 1234556689999999999999999999999999999998543
No 326
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=1.1e-29 Score=273.34 Aligned_cols=237 Identities=22% Similarity=0.289 Sum_probs=196.5
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|...+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999865 68899999986542 23446788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-cEEEecccCceeccCCCC
Q 001988 804 MSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 804 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-~~kl~DfGla~~~~~~~~ 881 (985)
+++++|.+++.... ..+++..+..++.|+++|++|| |+.+++||||||+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHI---HDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999999987643 3578999999999999999999 789999999999999999886 569999999987643221
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------------hHHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------AKEQCLLSIFSLA 949 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~l~~l~ 949 (985)
......|++.|+|||......++.++|+ |++|+.+++++++..+........ .....+.++.+++
T Consensus 158 --~~~~~~~~~~~~ape~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 234 (257)
T cd08225 158 --LAYTCVGTPYYLSPEICQNRPYNNKTDI-WSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLI 234 (257)
T ss_pred --cccccCCCccccCHHHHcCCCCCchhhH-HHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHH
Confidence 1223458899999999988889999999 999999999999876654321111 1112356799999
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 001988 950 LECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 950 ~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+|+..+|++||++.|+++.
T Consensus 235 ~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 235 SQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHhccChhhCcCHHHHhhC
Confidence 99999999999999999763
No 327
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=3.6e-29 Score=278.18 Aligned_cols=233 Identities=25% Similarity=0.323 Sum_probs=193.5
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
|...+.||+|+||.||+|+.. ++..||+|.+..... .....+.+|++++++++|||++++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666788999999999999864 788999999874422 2345788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++ |++.+.+......+++.++..++.|++.|+.|| |+.+|+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---- 178 (317)
T cd06635 107 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---- 178 (317)
T ss_pred CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----
Confidence 96 588888766556789999999999999999999 7899999999999999999999999999998764321
Q ss_pred eecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcchhh-------------hhHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------AAKEQCLLSIFS 947 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------~~~~~~~~~l~~ 947 (985)
....+++.|+|||.+. .+.++.++|+ |++|+++++++++..+....... .....++..+.+
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv-~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDV-WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRN 255 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccH-HHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHH
Confidence 2235888999999874 4668889999 99999999999988654322110 112235677899
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHH
Q 001988 948 LALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
++.+|++.+|.+||++.++++...
T Consensus 256 li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 256 FVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred HHHHHccCCcccCcCHHHHHhChh
Confidence 999999999999999999998643
No 328
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=9e-30 Score=298.69 Aligned_cols=239 Identities=16% Similarity=0.148 Sum_probs=182.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc--CCcEEEEEEe--------------cc---CCcchHHHHHHHHHHHHhcCCCCe
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE--DGVEIAIKVF--------------HP---QCASTLKSFEAECEVIKNIRHRNL 784 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vAvK~~--------------~~---~~~~~~~~~~~E~~il~~l~h~ni 784 (985)
..++|++.+.||+|+||+||+|..+ ++..+++|.+ .+ ........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998754 2222222211 11 111234567899999999999999
Q ss_pred eeEEeeeecCCceEEEEeccCCCChHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc
Q 001988 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSN----CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD 860 (985)
Q Consensus 785 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~ 860 (985)
+++++++...+..|+|+|++. +++.+++.... ..........++.|++.||+|| |++|||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yL---H~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYI---HDKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEC
Confidence 999999999999999999994 57877765431 1233556778999999999999 789999999999999999
Q ss_pred CCCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCc-ch-h----
Q 001988 861 EDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGE-EK-H---- 934 (985)
Q Consensus 861 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~-~~-~---- 934 (985)
.++.+||+|||+++.+..... .......||+.|+|||.+.+..++.++|+ |++|+++++++++...... .. .
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di-wSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDI-WSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHH-HHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 999999999999988753322 22234579999999999999999999999 9999999999987643211 00 0
Q ss_pred --------------hhh--------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 935 --------------FAA--------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 935 --------------~~~--------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+. ....+..+.+++.+|+..||.+||++.|++.
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 0001234566789999999999999999986
No 329
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=3.9e-29 Score=270.10 Aligned_cols=227 Identities=25% Similarity=0.336 Sum_probs=191.6
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||.|+||.||+|+.. +++.||+|++.+... ...+.+.+|+.++++++||||+++++++.+++..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 589999999875432 2346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 889 (985)
.+++.... .+++..+..++.|+++||+|+ |+++++|+||+|+||+++.++.+||+|||+++...... ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~l---H~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYL---HNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFC 153 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccccc
Confidence 99998653 578999999999999999999 88999999999999999999999999999998764322 122346
Q ss_pred cccccccccccccCccchhhhcccccccchhhhcccccccCcch--hhh-------------hHHHHHHHHHHHHHHccC
Q 001988 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK--HFA-------------AKEQCLLSIFSLALECTM 954 (985)
Q Consensus 890 gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~--~~~-------------~~~~~~~~l~~l~~~cl~ 954 (985)
+++.|+|||.+....++.++|+ |++|+++++++++..+..... ... .+...++++.+++.+||.
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 232 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDY-WSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLR 232 (262)
T ss_pred CCcCccChhHhcCCCCCChhhh-hhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHcc
Confidence 8899999999988889999999 999999999999887665432 110 111235789999999999
Q ss_pred CCCCCCCC-----HHHHHH
Q 001988 955 ESPEKRID-----AKDTIT 968 (985)
Q Consensus 955 ~~P~~RPt-----~~ev~~ 968 (985)
.+|++||+ +.|+++
T Consensus 233 ~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 233 RNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CChhhCcCCcccCHHHHhc
Confidence 99999999 566554
No 330
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.2e-31 Score=303.91 Aligned_cols=207 Identities=24% Similarity=0.296 Sum_probs=178.7
Q ss_pred HHHHHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecC
Q 001988 719 FELLRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSND 794 (985)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~ 794 (985)
.++....++|.+.++||+|+||.|..++.+ +++.||+|++.+. ...+..-|..|-++|..-+.+-|++++.+|++.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 345556688999999999999999999975 7788999999863 234567799999999999999999999999999
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
.+.|+||||++||+|...+...+ .+++.....++..|+.||.-+ |+.|+|||||||+|||+|..|++||+|||.|.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldsl---H~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSL---HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHH---HhccceeccCCcceeEecccCcEeeccchhHH
Confidence 99999999999999999998877 788888899999999999999 89999999999999999999999999999998
Q ss_pred eccCCCCcceeccccccccccccccccc-----CccchhhhcccccccchhhhcccccccCc
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFV-----GELSLKRWVNDLLPVSLVEVVDKSLLSGE 931 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~~~~g~~~~~i~~~~~~~~~ 931 (985)
.+..++ .......+|||.|++||++.. +.|+..+|. |++|+++|||+-|+-++..
T Consensus 224 km~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDw-WSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 224 KMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDW-WSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred hcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccch-hhhHHHHHHHHcCCCcchH
Confidence 886444 334456679999999998862 456666665 9999999999988766544
No 331
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=2.5e-29 Score=278.64 Aligned_cols=238 Identities=26% Similarity=0.298 Sum_probs=192.3
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKAL 799 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~l 799 (985)
.++|+..+.||+|+||.||+|... +|+.||+|.++..... ....+.+|+.++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999865 6899999998754322 223567899999999999999999998754 56899
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
||||++ ++|.+++......+++.++..++.|++.|++|| |+.|++||||||+||++++++.+||+|||.+..+...
T Consensus 86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYL---HENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 999996 589888876656789999999999999999999 7899999999999999999999999999999876533
Q ss_pred CCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh---------------------
Q 001988 880 DESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA--------------------- 937 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~--------------------- 937 (985)
.. ......+++.|+|||.+.+ ..++.++|+ |++|+.+++++++..+.........
T Consensus 162 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-wslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 162 AK--PMTPKVVTLWYRAPELLLGCTTYTTAIDM-WAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred cC--CCCcccccccccChhhhcCCCCcCchHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 21 1122346788999998865 457889999 9999999999998765432110000
Q ss_pred --------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 --------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 --------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.....+++.+++.+|++.||++||++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00125667889999999999999999999863
No 332
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=3.5e-29 Score=274.31 Aligned_cols=235 Identities=24% Similarity=0.321 Sum_probs=193.1
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceEEEEe
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKALVLE 802 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~lv~e 802 (985)
|...+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999876 58899999998663 23345688999999999999999999999887 88999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+++ +|.+++......+++..++.++.|+++|++|| |+.|++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~L---H~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYL---HSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9974 89998877655789999999999999999999 788999999999999999999999999999987754332
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------------- 936 (985)
.......++..|+|||.+.+ ..++.++|+ |++|+.+++++++..+........
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv-~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDM-WSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 11233457889999997764 457889999 999999999999876543211100
Q ss_pred ----------------hHHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ----------------AKEQ-CLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ----------------~~~~-~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.... ++.++.+++.+|++.+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0001 2667889999999999999999999875
No 333
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=1.1e-29 Score=274.56 Aligned_cols=232 Identities=27% Similarity=0.303 Sum_probs=193.3
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 599999999875533 3456788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC------cc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE------ST 883 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~------~~ 883 (985)
.+++...+ .+++..+..++.|+++||+|| |+.+++||||+|+||++++++.+||+|||++........ ..
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYL---HSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99998755 689999999999999999999 789999999999999999999999999999876432211 11
Q ss_pred eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHH--HHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQC--LLSIFSLAL 950 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~--~~~l~~l~~ 950 (985)
......++..|+|||.......+.+.|+ |++|+.+++++++..+........ .++.+ +..+.+++.
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv-~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 235 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDW-WSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLIS 235 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhh-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHH
Confidence 2234568889999999988889999999 999999999999887654332111 11122 678999999
Q ss_pred HccCCCCCCCCCHHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~L 970 (985)
+|++.+|++||++.++.+.+
T Consensus 236 ~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 236 KLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHhcCCHhhcCCCccHHHHh
Confidence 99999999999995555544
No 334
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=3.3e-29 Score=282.86 Aligned_cols=235 Identities=23% Similarity=0.287 Sum_probs=191.6
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC------
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND------ 794 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~------ 794 (985)
..++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999865 78999999986532 23345677899999999999999999988643
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
...++||||++ ++|.+.+... ++......++.|++.||+|| |+.||+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 35699999995 5888887643 78888999999999999999 78999999999999999999999999999998
Q ss_pred eccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------- 937 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------- 937 (985)
...... ......+++.|+|||.+.+..++.+.|+ |++|+.++++++++.+.........
T Consensus 167 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv-wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 167 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDI-WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eCCCCC---CCCCCcccccccCHHHHhCCCCCCchhh-HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 754221 1223458899999999999999999999 9999999999988765432110000
Q ss_pred -------------------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 -------------------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 -------------------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
....++++.+++.+|++.||++||++.|++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00124567899999999999999999999864
No 335
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-30 Score=252.98 Aligned_cols=232 Identities=23% Similarity=0.279 Sum_probs=190.4
Q ss_pred CCceeeccCceeEEEEEEc-CCcEEEEEEeccC-CcchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEEeccCC
Q 001988 730 ENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ-CASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 730 ~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
....+|.|..|.||+++.+ +|..+|||.+.+. +..+.+++...++++.+.. +|.||+-+|||..+..++|-||.|.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs- 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS- 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence 3466999999999999865 6889999999765 3445677888888877764 8999999999999999999999984
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
-..+..++.-.+++++.-.-++..-++.||.||. ..++|+|||+||+|||+|+.|.+|+||||++-++.+... .+
T Consensus 175 ~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLK--eKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA---ht 249 (391)
T KOG0983|consen 175 TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA---HT 249 (391)
T ss_pred HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHH--HhcceeecccCccceEEccCCCEEeecccccceeecccc---cc
Confidence 3566666666667888888889999999999997 677899999999999999999999999999987754333 33
Q ss_pred ccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcc---------------hhhhhHHHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEE---------------KHFAAKEQCLLSIFSL 948 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~---------------~~~~~~~~~~~~l~~l 948 (985)
..+|.+.|||||.+- ...|..++|| |++|+.++|++++..++..- +..+.....+..+.++
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDV-WSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f 328 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADV-WSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF 328 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhh-hhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence 456999999999874 4678999999 99999999999988765431 1111222356789999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~ 968 (985)
+..|+..|+.+||...++++
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHhhcCcccCcchHHHhc
Confidence 99999999999999998875
No 336
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=4.6e-29 Score=272.67 Aligned_cols=232 Identities=22% Similarity=0.279 Sum_probs=187.9
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcC-CCCeeeEEeeeecC--CceEEEEe
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIR-HRNLVKIISSCSND--DFKALVLE 802 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~--~~~~lv~e 802 (985)
|+..+.||+|+||.||+|... +++.||+|+++.... .......+|+.+++++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 556788999999999999864 788999999875422 22334457888999885 99999999999887 88999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|++ |++.+.+......+++.++..++.|++.||+|| |+.|++||||||+||+++. +.+||+|||+++........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHM---HRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 996 588888877655789999999999999999999 7899999999999999999 99999999999876432221
Q ss_pred ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------------- 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------------- 936 (985)
....++..|+|||.+.. +.++.++|+ |++|+.+++++++..+........
T Consensus 156 ---~~~~~~~~y~aPE~~~~~~~~~~~~Di-~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 156 ---TEYISTRWYRAPECLLTDGYYGPKMDI-WAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred ---CCCCCCcccCChhHhhcCCCCCcchhH-HHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 22457889999997654 556889999 999999999998765443211000
Q ss_pred ---------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.....+.++.+++.+|++++|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 01134578999999999999999999999875
No 337
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=4.3e-29 Score=276.92 Aligned_cols=239 Identities=23% Similarity=0.313 Sum_probs=189.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCC------
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDD------ 795 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~------ 795 (985)
.++|+..+.||+|+||.||+|... +++.||||.+...... ....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457889999999999999999865 7899999988654222 2345678999999999999999999987654
Q ss_pred --ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCc
Q 001988 796 --FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873 (985)
Q Consensus 796 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla 873 (985)
..++||||++ +++.+.+......+++.+...++.|++.||+|| |++|++||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI---HRNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 3499999996 588888877655789999999999999999999 7889999999999999999999999999999
Q ss_pred eeccCCCCc--ceecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhhhh-------------
Q 001988 874 KLLSGEDES--TMRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------- 937 (985)
Q Consensus 874 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------- 937 (985)
..+...... .......++..|+|||.+.+.. ++.++|+ |++|+.+++++++..+.........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDM-WGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhh-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 876433221 1112345788999999876543 6788999 9999999999987654322110000
Q ss_pred -------------------------HH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -------------------------KE-----QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -------------------------~~-----~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.. .....+.+++.+|+..+|.+||++.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00 01245678999999999999999999875
No 338
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=234.85 Aligned_cols=234 Identities=23% Similarity=0.314 Sum_probs=188.0
Q ss_pred CccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|...++||+|.||+||+|+. ++++.||+|+++.+.. .-.....+|+-+++.++|+|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 567788999999999999984 5788899999876532 3356788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
|. .+|..+...-.+.++......++.|+.+||.|+ |++++.|||+||+|.+++.+|+.|++|||+|+.+.-+. .
T Consensus 83 cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fc---hshnvlhrdlkpqnllin~ngelkladfglarafgipv--r 156 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFC---HSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--R 156 (292)
T ss_pred hh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhh---hhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce--E
Confidence 94 589999988877899999999999999999999 89999999999999999999999999999999875322 2
Q ss_pred eecccccccccccccccccCc-cchhhhcccccccchhhhccc-cc-ccCcchhhhh-----------------------
Q 001988 884 MRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDK-SL-LSGEEKHFAA----------------------- 937 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~-~~-~~~~~~~~~~----------------------- 937 (985)
..+..+-|..|.+|+++++.. |+...|+ |+.|+.+.|+... .. +.+.+ ..++
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidm-wsagcifaelanagrplfpg~d-vddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDM-WSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHh-hhcchHHHHHhhcCCCCCCCCc-HHHHHHHHHHHhCCCccccCCccccCC
Confidence 234456899999999988754 6778888 8889888887652 22 22221 1110
Q ss_pred -----------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -----------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -----------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.......-+++.++.+.-+|.+|.++.+.++
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 0111223456788888888999999988764
No 339
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=2.8e-29 Score=281.76 Aligned_cols=239 Identities=25% Similarity=0.330 Sum_probs=193.0
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC--CcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecC--Cce
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CASTLKSFEAECEVIKNI-RHRNLVKIISSCSND--DFK 797 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~--~~~ 797 (985)
..++|...+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888899999999999999875 6889999988643 223345677899999999 999999999998654 367
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||++ ++|.+++... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.+.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~L---H~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYI---HSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999997 5999988765 678899999999999999999 78999999999999999999999999999998764
Q ss_pred CCCCc---ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-----------------
Q 001988 878 GEDES---TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------- 936 (985)
Q Consensus 878 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------- 936 (985)
..... .......|++.|+|||.+.. ..++.++|+ |++|+++++++++..+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi-~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDM-WSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 33221 22334568999999998765 457788999 999999999999886543211000
Q ss_pred -------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 -------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 -------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
....++.++.+++.+||+.+|.+||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000135668899999999999999999999975
No 340
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=2.6e-29 Score=279.57 Aligned_cols=237 Identities=22% Similarity=0.319 Sum_probs=189.3
Q ss_pred CccCCceeeccCceeEEEEEEc---CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC--CceE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE---DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSND--DFKA 798 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~---~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~~ 798 (985)
+|...+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4677889999999999999864 47899999998642 23345678899999999999999999999888 7899
Q ss_pred EEEeccCCCChHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC----CCcEEEecc
Q 001988 799 LVLEYMSNGSLEDCLHSS----NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE----DMVAHLSDF 870 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~----~~~~kl~Df 870 (985)
+||||+++ ++.+.+... ...+++..+..++.|++.|++|| |+.+|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL---HSNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999965 677766432 23678899999999999999999 7999999999999999999 999999999
Q ss_pred cCceeccCCCC-cceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh------------
Q 001988 871 GMAKLLSGEDE-STMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------ 936 (985)
Q Consensus 871 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------ 936 (985)
|+++.+..... ........+++.|+|||.+.+. .++.++|+ |++|+.+++++++..+........
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDI-WAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHH-HHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 99987643322 1122344688999999987664 47888999 999999999998776543211000
Q ss_pred --------------------------------------hHH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 --------------------------------------AKE-------QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 --------------------------------------~~~-------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
... ....++.+++.+|++++|++||++.|+++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 12346888999999999999999999875
No 341
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=1.3e-29 Score=277.93 Aligned_cols=236 Identities=23% Similarity=0.290 Sum_probs=189.7
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|...+.||+|+||.||++... +++.||+|.+..... .....+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999865 689999999875432 34567889999999996 99999999999998899999999
Q ss_pred cCCCChHHHh---hc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 804 MSNGSLEDCL---HS-SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 804 ~~~gsL~~~l---~~-~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
++. ++.++. .. ....+++....+++.+++.||+||| |+.+++||||||+||+++.++.+||+|||+++.+...
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh--~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK--EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh--hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 854 554432 22 2356889999999999999999995 4569999999999999999999999999999765432
Q ss_pred CCcceecccccccccccccccccC---ccchhhhcccccccchhhhcccccccCcchhh-----------------hhHH
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVG---ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-----------------AAKE 939 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-----------------~~~~ 939 (985)
.. .....|++.|+|||.+... .++.++|+ |++|++++++++|+.+....... ....
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDV-WSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhh-hHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCC
Confidence 21 1223588999999998766 68889999 99999999999988765432100 0011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.++.++.+++.+||+.+|++||++.++++.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 256778999999999999999999999874
No 342
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=2.5e-29 Score=281.89 Aligned_cols=244 Identities=23% Similarity=0.321 Sum_probs=194.4
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC-----Cce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNIRHRNLVKIISSCSND-----DFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~-----~~~ 797 (985)
+++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 578999999999999999999854 78999999986432 22345678899999999999999999987544 357
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||++ +++.+.+... .+++..+..++.|+++||+|| |+.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~L---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99999996 5888877653 588999999999999999999 78999999999999999999999999999998764
Q ss_pred CCCCcc-eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-------------------
Q 001988 878 GEDEST-MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------- 936 (985)
Q Consensus 878 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------- 936 (985)
...... ......|++.|+|||.+.+ ..++.++|+ |++|+.++++++|+.+........
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-wslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDI-WSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 322211 1233468999999998754 567889999 999999999999886553211000
Q ss_pred -----------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHhHh
Q 001988 937 -----------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR--LLKIRD 975 (985)
Q Consensus 937 -----------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~--L~~i~~ 975 (985)
.....+.++.+++.+||+.+|++||++.|+++. ++...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 001124568899999999999999999999886 554443
No 343
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=1.7e-29 Score=277.06 Aligned_cols=229 Identities=24% Similarity=0.282 Sum_probs=193.5
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChH
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLE 810 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 810 (985)
..||+|+||.||+|... +++.||||++..........+.+|+.++++++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 56999999999999864 78999999987555455667899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccccc
Q 001988 811 DCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLA 890 (985)
Q Consensus 811 ~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~g 890 (985)
+++... .+++.....++.|++.|++|| |+.|++||||+|+||++++++.++|+|||++........ ......+
T Consensus 106 ~~~~~~--~~~~~~~~~~~~ql~~~l~~l---H~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~ 178 (292)
T cd06657 106 DIVTHT--RMNEEQIAAVCLAVLKALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVG 178 (292)
T ss_pred HHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--ccccccc
Confidence 987643 478899999999999999999 788999999999999999999999999999876543221 1233458
Q ss_pred ccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh--------------hHHHHHHHHHHHHHHccCCC
Q 001988 891 TIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------AKEQCLLSIFSLALECTMES 956 (985)
Q Consensus 891 t~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~l~~l~~~cl~~~ 956 (985)
++.|+|||.+....++.++|+ |++|+++++++++..+........ ....++..+.+++.+||..+
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv-~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 257 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDI-WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRD 257 (292)
T ss_pred CccccCHHHhcCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCC
Confidence 899999999888888999999 999999999999877543221110 11224567889999999999
Q ss_pred CCCCCCHHHHHH
Q 001988 957 PEKRIDAKDTIT 968 (985)
Q Consensus 957 P~~RPt~~ev~~ 968 (985)
|.+||++.++++
T Consensus 258 P~~R~~~~~ll~ 269 (292)
T cd06657 258 PAQRATAAELLK 269 (292)
T ss_pred cccCcCHHHHhc
Confidence 999999999987
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=4.8e-29 Score=275.46 Aligned_cols=240 Identities=24% Similarity=0.313 Sum_probs=193.6
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCC----
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDD---- 795 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~---- 795 (985)
...++|+..+.||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 688999999875432 23356778999999999999999999987654
Q ss_pred ------ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 796 ------FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 796 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
..++||||+++ ++.+.+......+++..+..++.|++.||+|| |+.||+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC---HKKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999976 77777776555789999999999999999999 788999999999999999999999999
Q ss_pred ccCceeccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhh-------------
Q 001988 870 FGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------- 935 (985)
Q Consensus 870 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------- 935 (985)
||++..+...... ......++..|+|||.+.. ..++.++|+ |++|+.+++++++..+.......
T Consensus 160 fg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di-~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDV-WSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999876533321 1122346788999998764 346888999 99999999999887544321100
Q ss_pred ----------------------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 ----------------------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 ----------------------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...+..+..+.+++.+||..+|.+||++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 001124577899999999999999999999875
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=5.4e-29 Score=273.89 Aligned_cols=236 Identities=25% Similarity=0.329 Sum_probs=189.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++|+..+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999865 789999999865432 234568899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-CCcEEEecccCceeccCCC
Q 001988 803 YMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-~~~~kl~DfGla~~~~~~~ 880 (985)
|++ +++.+++... ....++.....++.||+.||+|| |+++++||||+|+||++++ ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYC---HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 5888877654 23367888889999999999999 7899999999999999985 5679999999997653221
Q ss_pred Ccceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-----------------------
Q 001988 881 ESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------------- 936 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------------- 936 (985)
.......+++.|+|||.+.+ ..++.++|+ |++|+.+++++++..+........
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv-~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 158 --RTFTHEVVTLWYRAPEILLGSRHYSTPVDI-WSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred --cccccCceeecccCHHHHhCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 11123357889999998766 357889999 999999999999876543211100
Q ss_pred -----------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -----------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -----------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.....++++.+++.+|+..+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00123466789999999999999999999986
No 346
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=2.7e-29 Score=273.64 Aligned_cols=228 Identities=24% Similarity=0.281 Sum_probs=188.8
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||+||+|... +|+.||+|.+.... ......+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 78999999987542 12244567899999999999999999999999999999999999999
Q ss_pred HHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccc
Q 001988 810 EDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQT 888 (985)
Q Consensus 810 ~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 888 (985)
.+++.... ..+++..+..++.|++.|+.|| |+.|++||||+|+||++++++.+||+|||.+...... ......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHL---HQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Cccccc
Confidence 99987653 3688999999999999999999 7899999999999999999999999999998765421 112234
Q ss_pred ccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh---------------hhHHHHHHHHHHHHHHcc
Q 001988 889 LATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQCLLSIFSLALECT 953 (985)
Q Consensus 889 ~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~l~~l~~~cl 953 (985)
.++..|+|||.+.++.++.++|+ |++|+.++++++++.+....... ..+...++.+.+++.+||
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 233 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDW-FALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALL 233 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhh-HHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHc
Confidence 57889999999988889999999 99999999999988765432110 111234677899999999
Q ss_pred CCCCCCCC-----CHHHHHH
Q 001988 954 MESPEKRI-----DAKDTIT 968 (985)
Q Consensus 954 ~~~P~~RP-----t~~ev~~ 968 (985)
+.+|.+|| ++.+++.
T Consensus 234 ~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 234 QKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCChhHccCCCcccHHHHHh
Confidence 99999999 5555653
No 347
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=5.8e-29 Score=272.07 Aligned_cols=234 Identities=24% Similarity=0.355 Sum_probs=190.5
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
|+..+.||.|++|.||+|... +|+.||+|++..... .....+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999864 799999999875532 22356889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+ ++|.+++.... ..+++..+..++.|+++||+|| |+++++||||+|+||++++++.++|+|||+++.+.....
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~l---H~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYC---HSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 5 68999987653 3589999999999999999999 788999999999999999999999999999976532211
Q ss_pred eecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh--------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------------- 936 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------------- 936 (985)
......+++.|+|||.+.+. .++.++|+ |++|+.+++++++..+........
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di-~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDI-WSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 11223468899999987664 46888999 999999999999876543211100
Q ss_pred --------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 --------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 --------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.....+.++.+++.+|++.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00112356889999999999999999999875
No 348
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=3.6e-29 Score=272.76 Aligned_cols=228 Identities=23% Similarity=0.236 Sum_probs=183.4
Q ss_pred eeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHh---cCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 733 IIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKN---IRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
.||+|+||.||+|... +++.||+|.+.+... .....+.+|..+++. .+||+|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 688999999875422 122334455544443 379999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+|+|.+++...+ .+++.....++.|++.||+|| |+.+|+||||||+||++++++.+|++|||++....... .
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~ 152 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----c
Confidence 999999987654 589999999999999999999 78999999999999999999999999999987653221 1
Q ss_pred ccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchh--h------------hhHHHHHHHHHHHHH
Q 001988 886 TQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--F------------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--~------------~~~~~~~~~l~~l~~ 950 (985)
....|+..|+|||.... ..++.++|+ |++|+.+++++++..++..... . ..++..+.++.+++.
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di-~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 231 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADW-FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLE 231 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhh-HHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHH
Confidence 23458999999998864 557889999 9999999999998876542211 0 112235678899999
Q ss_pred HccCCCCCCCC-----CHHHHHHH
Q 001988 951 ECTMESPEKRI-----DAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RP-----t~~ev~~~ 969 (985)
+|+..+|.+|| ++.|+++.
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 232 GLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHhcCCHHHhcCCCCCCHHHHHhC
Confidence 99999999999 58888764
No 349
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=3.6e-29 Score=269.21 Aligned_cols=234 Identities=21% Similarity=0.267 Sum_probs=198.0
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|+..+.||+|+||.||++... +++.+|+|.+.... ......+.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4777889999999999999754 78899999987543 23345678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 804 MSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 804 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
+++++|.+++... +..+++...+.++.|+++|++|| |+.|++||||+|+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---h~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL---HEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998762 34678999999999999999999 8999999999999999999999999999999876433
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh------------hhHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------AAKEQCLLSIFSL 948 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~l~~l 948 (985)
......+++.|+|||...+..++.++|+ |++|+++++++++..+....... ..+...+.++.++
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~-~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDI-WSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNF 232 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHH
Confidence 2223458889999999999889999999 99999999999987654432111 1223456789999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 001988 949 ALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 949 ~~~cl~~~P~~RPt~~ev~~ 968 (985)
+.+|++.+|++||++.|+++
T Consensus 233 i~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 233 IRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHcCCCcccCCCHHHHhc
Confidence 99999999999999999875
No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=5.9e-29 Score=271.91 Aligned_cols=234 Identities=24% Similarity=0.327 Sum_probs=195.3
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
|...+.||+|++|.||+|... +++.+|+|.+...... ....+.+|++++++++|+||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566788999999999999864 7889999998765332 3567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
++ ++.+++......+++..+..++.|+++|++|| |+.+|+||||||+||++++++.+||+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFC---HSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHH---HHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 75 89888877656789999999999999999999 78999999999999999999999999999998765332 11
Q ss_pred ecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhh----------------------------
Q 001988 885 RTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------------------- 935 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------------------- 935 (985)
.....++..|+|||.+... .++.++|+ |++|+.+++++++..+.......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di-~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDI-WSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 2234578899999998776 78899999 99999999999987544221100
Q ss_pred -------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 -------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 -------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
...+..+.++.+++.+||.++|.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 011235678999999999999999999999875
No 351
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=9.8e-29 Score=267.48 Aligned_cols=235 Identities=20% Similarity=0.201 Sum_probs=190.1
Q ss_pred HHHHHHHhcCccCCcee--eccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeec
Q 001988 718 YFELLRATDNFAENNII--GIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSN 793 (985)
Q Consensus 718 ~~~~~~~~~~~~~~~~i--g~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~ 793 (985)
..+.....++|...+.+ |+|+||.||+++.+ +++.+|+|.+....... .|+.+...+ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec
Confidence 34455556677777776 99999999999864 78889999987542221 123333223 79999999999999
Q ss_pred CCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-cEEEecccC
Q 001988 794 DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGM 872 (985)
Q Consensus 794 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-~~kl~DfGl 872 (985)
.+..++||||+++|+|.+++.... .+++.+...++.|+++|++|| |+.|++||||||+||+++.++ .++|+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDL---HKHNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 999999999999999999998764 789999999999999999999 789999999999999999998 999999999
Q ss_pred ceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh---------------hh
Q 001988 873 AKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AA 937 (985)
Q Consensus 873 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~ 937 (985)
++...... ...++..|+|||.+.+..++.++|+ |++|+.+++++++..+....... ..
T Consensus 157 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv-wslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T PHA03390 157 CKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDW-WAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF 229 (267)
T ss_pred ceecCCCc------cCCCCCcccChhhhcCCCCCchhhH-HHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCc
Confidence 88753221 2358899999999998899999999 99999999999988765422110 11
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 001988 938 KEQCLLSIFSLALECTMESPEKRID-AKDTIT 968 (985)
Q Consensus 938 ~~~~~~~l~~l~~~cl~~~P~~RPt-~~ev~~ 968 (985)
....+..+.+++.+|++.+|.+||+ +.|+++
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 230 IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1235678899999999999999996 588763
No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=1.4e-28 Score=266.02 Aligned_cols=237 Identities=24% Similarity=0.290 Sum_probs=194.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-----cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC--Cce
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-----ASTLKSFEAECEVIKNIRHRNLVKIISSCSND--DFK 797 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--~~~ 797 (985)
.+|...+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999864 68999999875331 22345788999999999999999999998764 457
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++++|.+++...+ .+++....+++.|++.|++|| |+.|++||||||+||+++.++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 89999999999999987654 478889999999999999999 79999999999999999999999999999998754
Q ss_pred CCCC-cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh-------------hhHHHHHH
Q 001988 878 GEDE-STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------AAKEQCLL 943 (985)
Q Consensus 878 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------~~~~~~~~ 943 (985)
.... ........++..|+|||.+.+..++.++|+ |++|+.++++++++.+....... ..+....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADV-WSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSD 236 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccH-HHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCH
Confidence 2111 111223458999999999988888999999 99999999999988765433211 12334567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 944 SIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 944 ~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
++.+++.+|+. +|..||++.+++.
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhc
Confidence 79999999998 5799999998764
No 353
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=9.8e-29 Score=271.45 Aligned_cols=240 Identities=20% Similarity=0.238 Sum_probs=181.8
Q ss_pred hcCccCCceeeccCceeEEEEEEcC----CcEEEEEEeccCCcchH-----------HHHHHHHHHHHhcCCCCeeeEEe
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLED----GVEIAIKVFHPQCASTL-----------KSFEAECEVIKNIRHRNLVKIIS 789 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vAvK~~~~~~~~~~-----------~~~~~E~~il~~l~h~niv~l~~ 789 (985)
.++|...+.||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578999999999999999998754 34567776443322110 01122333455668999999999
Q ss_pred eeecCC----ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcE
Q 001988 790 SCSNDD----FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 865 (985)
Q Consensus 790 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~ 865 (985)
++.... ..++++|++. .++.+.+.... ..++.....++.|++.||+|| |+++|+||||||+|||++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYI---HEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCcE
Confidence 876543 3468888874 46666665432 356788899999999999999 78999999999999999999999
Q ss_pred EEecccCceeccCCCCc-----ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh-----
Q 001988 866 HLSDFGMAKLLSGEDES-----TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----- 935 (985)
Q Consensus 866 kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----- 935 (985)
||+|||+|+.+...... .......||+.|+|||...+..++.++|+ |++|+.+++++++..++......
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~Di-wSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDL-ESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999876432211 11223469999999999999999999999 99999999999998776433110
Q ss_pred -------h-------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 936 -------A-------AKEQCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 936 -------~-------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
. ....+++++.+++..|+..+|++||++.++.+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0 1123567899999999999999999999999876
No 354
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=5.2e-30 Score=256.95 Aligned_cols=242 Identities=23% Similarity=0.283 Sum_probs=191.8
Q ss_pred HhcCccCCceeeccCceeEEEEEEc---C--CcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeec-CC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE---D--GVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSN-DD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~---~--~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~-~~ 795 (985)
....|+....||+|.||.||+|..+ + ++.+|+|+++.... .-.....+|+..++.++|||++.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457888999999999999999643 3 33799999975522 224567899999999999999999999877 77
Q ss_pred ceEEEEeccCCCChHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC----CcEEE
Q 001988 796 FKALVLEYMSNGSLEDCLHSS----NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED----MVAHL 867 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~----~~~kl 867 (985)
..++++||.+. +|.+.++.. .+.++...+..|++||+.|+.|| |+.-|+|||+||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YL---H~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYL---HSNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHH---hhhheeeccCCcceEEEeccCCccCeeEe
Confidence 88999999976 898888754 34678889999999999999999 89999999999999999877 89999
Q ss_pred ecccCceeccCCCCcc-eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcch------------
Q 001988 868 SDFGMAKLLSGEDEST-MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEK------------ 933 (985)
Q Consensus 868 ~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~------------ 933 (985)
+|||+|+.+...-... ....++-|..|.|||.+.+ ..|+.+.|+ |+.||.+.|+++-+..+....
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDv-WAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDV-WAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhh-HHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 9999999986543322 3455678999999998876 568999999 999999999988654332210
Q ss_pred ---------------hhhhHH------------------------------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 934 ---------------HFAAKE------------------------------QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 934 ---------------~~~~~~------------------------------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..+..+ ..++.-+++..+++.+||.+|.|+.+.++
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 000000 01233677999999999999999999876
Q ss_pred HH
Q 001988 969 RL 970 (985)
Q Consensus 969 ~L 970 (985)
..
T Consensus 337 h~ 338 (438)
T KOG0666|consen 337 HP 338 (438)
T ss_pred cc
Confidence 53
No 355
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=3.6e-29 Score=280.37 Aligned_cols=239 Identities=24% Similarity=0.313 Sum_probs=193.6
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeec----CCce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSN----DDFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~----~~~~ 797 (985)
.++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 378888999999999999999864 79999999987542 2334667889999999999999999998753 3467
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+. |+|.+++.... .+++..+..++.|+++||+|| |+++|+||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYI---HSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999995 68999887654 589999999999999999999 78999999999999999999999999999998764
Q ss_pred CCCCc--ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhh-------------------
Q 001988 878 GEDES--TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF------------------- 935 (985)
Q Consensus 878 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~------------------- 935 (985)
..... .......++..|+|||.+.. ..++.++|+ |++|+.++++++++.++......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di-~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDM-WSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccch-HHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 32221 11233468999999998765 457889999 99999999999888765321100
Q ss_pred -----------------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 936 -----------------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 936 -----------------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
......++++.+++.+|++.+|.+||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0001235778999999999999999999998873
No 356
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=7.1e-29 Score=277.76 Aligned_cols=248 Identities=22% Similarity=0.312 Sum_probs=202.2
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-----ceE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD-----FKA 798 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~-----~~~ 798 (985)
+|...+.||.|+||.||+|+.. ++..||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999965 58999999987653 334567899999999999999999999998765 789
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+||||++ ++|.+++.... .+++..+..++.|++.||+|| |+.||+||||||+||+++.++.++|+|||++.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~L---H~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYL---HSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999997 58999887654 789999999999999999999 789999999999999999999999999999988654
Q ss_pred CCCc-ceecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh--------------------
Q 001988 879 EDES-TMRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------- 936 (985)
Q Consensus 879 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------- 936 (985)
.... .......+++.|+|||.+.+. .++.++|+ |++|+++++++++..++.......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi-~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDI-WSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhH-HHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 3211 122334588899999999887 78899999 999999999999876543211000
Q ss_pred ----------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHhHhhhccc
Q 001988 937 ----------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR--LLKIRDTLSKR 980 (985)
Q Consensus 937 ----------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~--L~~i~~~~~~~ 980 (985)
.....+.++.+++.+||+.+|.+||++.+++.. ++.+++...+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~ 302 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEP 302 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCC
Confidence 001134668899999999999999999999984 66666544333
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=1.1e-28 Score=275.67 Aligned_cols=239 Identities=18% Similarity=0.280 Sum_probs=188.3
Q ss_pred eeecc--CceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCC
Q 001988 733 IIGIG--GFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNG 807 (985)
Q Consensus 733 ~ig~G--~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 807 (985)
.||+| +||+||+|+.. +|+.||+|++..... ...+.+++|+.+++.++||||+++++++..++..++||||+++|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999864 799999999875432 23467889999999999999999999999999999999999999
Q ss_pred ChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc---
Q 001988 808 SLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST--- 883 (985)
Q Consensus 808 sL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~--- 883 (985)
++.+++... ...+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+|++||+.+..........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYL---HQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 999998764 23588999999999999999999 78999999999999999999999999998654432211110
Q ss_pred --eecccccccccccccccccC--ccchhhhcccccccchhhhcccccccCcchh-------------------------
Q 001988 884 --MRTQTLATIGYMAPDEIFVG--ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH------------------------- 934 (985)
Q Consensus 884 --~~~~~~gt~~y~aPE~~~~~--~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~------------------------- 934 (985)
......++..|+|||++.++ .++.++|+ |++|+++++++++..+......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di-wslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDI-YSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhH-HHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 00112356679999998763 46789999 9999999999988765432110
Q ss_pred ---------------------------------hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhHh
Q 001988 935 ---------------------------------FAAKEQCLLSIFSLALECTMESPEKRIDAKDTIT--RLLKIRD 975 (985)
Q Consensus 935 ---------------------------------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~--~L~~i~~ 975 (985)
.+....+.+.+.+++++||..||++|||+.|+++ .+..+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 0012235677999999999999999999999974 3344444
No 358
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=5.2e-29 Score=271.88 Aligned_cols=238 Identities=26% Similarity=0.368 Sum_probs=199.5
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv 800 (985)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|.+++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999865 79999999987532 233467889999999998 99999999999999999999
Q ss_pred EeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 801 LEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
|||+++++|.+++...+ .+++.....++.|++.||+|| |+.|++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~L---h~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYL---HSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999998764 689999999999999999999 78999999999999999999999999999998765332
Q ss_pred Cc------------------ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh------
Q 001988 881 ES------------------TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------ 936 (985)
Q Consensus 881 ~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------ 936 (985)
.. .......++..|+|||......++.++|+ |++|+.+++++++..+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di-~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 235 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDL-WALGCIIYQMLTGKPPFRGSNEYLTFQKIL 235 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhH-HHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 21 12233457899999999988889999999 999999999999877654332111
Q ss_pred -----hHHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 001988 937 -----AKEQCLLSIFSLALECTMESPEKRIDA----KDTIT 968 (985)
Q Consensus 937 -----~~~~~~~~l~~l~~~cl~~~P~~RPt~----~ev~~ 968 (985)
.+...++.+.+++.+|++.+|.+||++ .++++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 122345678999999999999999999 66653
No 359
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=5.1e-29 Score=273.21 Aligned_cols=240 Identities=25% Similarity=0.271 Sum_probs=195.1
Q ss_pred CccCCceeeccCceeEEEEEE----cCCcEEEEEEeccCC----cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCce
Q 001988 727 NFAENNIIGIGGFGSVYRARL----EDGVEIAIKVFHPQC----ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~ 797 (985)
+|+..+.||+|+||.||+|+. .+++.||||.+++.. ....+.+.+|+++++++ +||||+++++++..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999974 257889999987532 12345678999999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++|+|.+++.... .+++.....++.|+++||+|| |+.+++||||||+||+++.++.++|+|||+++.+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~l---H~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHL---HQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999987653 578899999999999999999 78999999999999999999999999999988764
Q ss_pred CCCCcceecccccccccccccccccCc--cchhhhcccccccchhhhcccccccCcchhh---------------hhHHH
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFVGE--LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQ 940 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~ 940 (985)
.... .......|+..|+|||.+.+.. .+.++|+ |++|+.+++++++..+....... +.+..
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv-~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd05583 157 AEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDW-WSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKT 234 (288)
T ss_pred cccc-cccccccCCccccCHHHhcCCCCCCcchhhh-HHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcc
Confidence 3321 1223346889999999987655 6788999 99999999999988765321110 01122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITRLLK 972 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~ 972 (985)
.+..+.+++.+|++.+|++|||+.++.+.+..
T Consensus 235 ~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 45678999999999999999999888776644
No 360
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=1.5e-28 Score=272.10 Aligned_cols=234 Identities=24% Similarity=0.312 Sum_probs=192.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
.|...+.||+|+||.||+|+.. ++..||+|.+.... .....++.+|++++++++|+|++++++++...+..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999865 67889999986432 2234567889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
|+. |++.+.+......+++.++..++.|++.|+.|| |+.+++||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 996 688888766555689999999999999999999 7899999999999999999999999999998765321
Q ss_pred ceecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcchhh-------------hhHHHHHHHHH
Q 001988 883 TMRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------AAKEQCLLSIF 946 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------~~~~~~~~~l~ 946 (985)
....+++.|+|||.+. .+.++.++|+ |++|+++++++++..+....... .....++..+.
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDV-WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFR 244 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccch-HHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHH
Confidence 2245888999999875 3567889999 99999999999988654322110 01223567789
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 947 SLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
+++.+||..+|++||++.++++.-.
T Consensus 245 ~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 245 NFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred HHHHHHhhCCcccCCCHHHHhhCcc
Confidence 9999999999999999999987643
No 361
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=2.2e-28 Score=271.31 Aligned_cols=231 Identities=25% Similarity=0.305 Sum_probs=190.7
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 566778999999999999864 788999999875422 2335678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
++ |++.+++......+++.++..++.|++.|++|| |+.|++||||||+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 95 588888876666789999999999999999999 788999999999999999999999999999864321
Q ss_pred eecccccccccccccccc---cCccchhhhcccccccchhhhcccccccCcchhhh-------------hHHHHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------AKEQCLLSIFS 947 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------~~~~~~~~l~~ 947 (985)
.....|+..|+|||.+. .+.++.++|+ |++|+.+++++++..+........ .....+..+.+
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv-~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDV-WSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRG 251 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHH
Confidence 12346889999999874 4668889999 999999999998886543221100 11224467899
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 001988 948 LALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 948 l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
++.+|++++|.+||++.++++.
T Consensus 252 li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 252 FVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999864
No 362
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.1e-28 Score=274.27 Aligned_cols=234 Identities=18% Similarity=0.212 Sum_probs=185.5
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCC
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGS 808 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 808 (985)
++.+|.|+++.||++.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33445555555555544 6899999998765 23345689999999999999999999999999999999999999999
Q ss_pred hHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc-----
Q 001988 809 LEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES----- 882 (985)
Q Consensus 809 L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~----- 882 (985)
+.+++... ...+++.....++.|+++||+|| |+++|+||||||+||+++.++.+|++|||.+..+......
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~L---H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYI---HSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99999864 34578899999999999999999 7899999999999999999999999999998765432211
Q ss_pred ceeccccccccccccccccc--CccchhhhcccccccchhhhcccccccCcchhhh------------------------
Q 001988 883 TMRTQTLATIGYMAPDEIFV--GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------------------ 936 (985)
Q Consensus 883 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------------------ 936 (985)
.......++..|+|||.+.. ..++.++|+ |++|+.+++++++..++.......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di-ws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDI-YSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 11123457788999998865 357889999 999999999998876654221000
Q ss_pred ---------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 937 ---------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 937 ---------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.......++.+++.+||..+|++||++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 011234578889999999999999999999874
No 363
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.1e-28 Score=266.26 Aligned_cols=228 Identities=25% Similarity=0.278 Sum_probs=185.1
Q ss_pred ceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHH-hcCCCCeeeEEeeeecCCceEEEEeccCC
Q 001988 732 NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIK-NIRHRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~-~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+.||+|+||.||+|... +++.||+|.+++.... ....+..|..++. ..+|+|++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 6899999998754221 1233445555443 45899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
++|.+++.... .+++..+.+++.|++.||.|| |+.+++||||+|+||++++++.+||+|||+++.... ..
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~ 151 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDL---HQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NK 151 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cc
Confidence 99999997654 578899999999999999999 789999999999999999999999999999876432 22
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh---------------hHHHHHHHHHHHHHH
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------------AKEQCLLSIFSLALE 951 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------------~~~~~~~~l~~l~~~ 951 (985)
...+++.|+|||.+.+..++.++|+ |++|+.++++++|..+........ ..+.++.++.+++.+
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv-~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 230 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDW-WSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINR 230 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhh-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHH
Confidence 3458889999999988888999999 999999999999887654321111 112356789999999
Q ss_pred ccCCCCCCCCCHHHHHHHH
Q 001988 952 CTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~L 970 (985)
|+..+|++||++.++.+.+
T Consensus 231 ~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 231 LLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HccCCHHHccCCCcHHHHH
Confidence 9999999999886655543
No 364
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=1.5e-28 Score=268.79 Aligned_cols=233 Identities=24% Similarity=0.298 Sum_probs=189.8
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEEecc
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
|...+.||+|+||.||+|... +++.||||++...... ......+|+..+++++ |||++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566788999999999999975 5788999998755332 2334567999999998 999999999999999999999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 805 SNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 805 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
+|+|.+++.... ..+++..+..++.|++.||.|| |+.+++|+||+|+||++++++.++|+|||.++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHI---HKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 789999887653 5689999999999999999999 789999999999999999999999999999987643222
Q ss_pred eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh-------------------------
Q 001988 884 MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------------------------- 937 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------------------------- 937 (985)
.....++..|+|||.+.. ..++.++|+ |++|+.+++++++..+.........
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di-~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 155 -YTDYVSTRWYRAPEILLRSTSYSSPVDI-WALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred -cCCCCCcccccCceeeecCcCcCCccch-hhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 123458889999998754 457889999 9999999999998754422110000
Q ss_pred ----------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 ----------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 ----------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+..+.+++++||..+|.+||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0011367889999999999999999999875
No 365
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=6.6e-29 Score=273.40 Aligned_cols=238 Identities=25% Similarity=0.323 Sum_probs=192.2
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (985)
.++|...+.||+|+||.||+|..+ +++.||||.++.... .....+..|+.++.+.. ||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 366788899999999999999976 489999999975432 23455667887777764 999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
||++ +++.+........+++..+.+++.|++.|++|| |+ .||+||||+|+||++++++.+||+|||++..+....
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYL---KEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9985 578777766555789999999999999999999 54 699999999999999999999999999987764322
Q ss_pred CcceecccccccccccccccccCc----cchhhhcccccccchhhhcccccccCcchh-h--------------hhHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGE----LSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-F--------------AAKEQC 941 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-~--------------~~~~~~ 941 (985)
.. ....++..|+|||.+.... ++.++|+ |++|+.++++++++.+...... . +....+
T Consensus 170 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di-~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06618 170 AK---TRSAGCAAYMAPERIDPPDPNPKYDIRADV-WSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGF 245 (296)
T ss_pred cc---cCCCCCccccCHhhcCCCCCccccccchhH-HHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCC
Confidence 21 2234788999999986543 7889999 9999999999998876543111 0 001124
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 942 LLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
++++.+++.+||..+|.+||++.++++.-
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 67799999999999999999999998653
No 366
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=5.8e-29 Score=278.95 Aligned_cols=243 Identities=23% Similarity=0.301 Sum_probs=195.9
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecC-----Cc
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSND-----DF 796 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~-----~~ 796 (985)
.++|...+.||+|+||.||+|+.. +++.||||.++... ......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999864 78999999987542 23345678899999999999999999988644 35
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
.++||||+. ++|.+++...+ .+++.....++.|++.||.|| |+++++||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYI---HSANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999995 68998887653 689999999999999999999 7899999999999999999999999999999876
Q ss_pred cCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchh---------------------
Q 001988 877 SGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------------------- 934 (985)
Q Consensus 877 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------------------- 934 (985)
.... .......++..|+|||.+.. ..++.++|+ |++|+.+++++++..+......
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 159 SEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDV-WSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred CCCc--ccccccccccCccChHHHhcCCCCCCcccH-HHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 4322 12233457889999998765 468889999 9999999999988765432100
Q ss_pred ---------------------hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHhHh
Q 001988 935 ---------------------FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITR--LLKIRD 975 (985)
Q Consensus 935 ---------------------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~--L~~i~~ 975 (985)
....+.++.++.+++++|+..+|++||++.|+++. +..+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 00011345678899999999999999999999876 555443
No 367
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.8e-28 Score=269.11 Aligned_cols=236 Identities=25% Similarity=0.289 Sum_probs=191.3
Q ss_pred CccCCceeeccCceeEEEEEE----cCCcEEEEEEeccCCc----chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCce
Q 001988 727 NFAENNIIGIGGFGSVYRARL----EDGVEIAIKVFHPQCA----STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~ 797 (985)
+|+..+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467788999999999999986 3789999999875422 2346678999999999 589999999999999999
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+++++|.+++.... .+++.....++.|+++||+|| |+.|++||||||+||+++.++.+||+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999998654 578888999999999999999 78999999999999999999999999999998764
Q ss_pred CCCCcceecccccccccccccccccC--ccchhhhcccccccchhhhcccccccCcchhh---------------hhHHH
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFVG--ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------AAKEQ 940 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------~~~~~ 940 (985)
.... .......|+..|+|||.+... .++.+.|+ |++|+.+++++++..+....... +.+..
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv-~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (290)
T cd05613 157 EDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDW-WSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 234 (290)
T ss_pred cccc-cccccccCCcccCChhhccCCCCCCCccccH-HHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCcc
Confidence 3221 122334688999999998753 46778999 99999999999988665321100 01122
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRI-----DAKDTIT 968 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RP-----t~~ev~~ 968 (985)
....+.+++.+|+..+|++|| ++.++..
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 456788999999999999997 5666654
No 368
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.8e-28 Score=274.92 Aligned_cols=237 Identities=21% Similarity=0.294 Sum_probs=189.5
Q ss_pred cCcc-CCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcch--------------HHHHHHHHHHHHhcCCCCeeeEEe
Q 001988 726 DNFA-ENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAST--------------LKSFEAECEVIKNIRHRNLVKIIS 789 (985)
Q Consensus 726 ~~~~-~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~--------------~~~~~~E~~il~~l~h~niv~l~~ 789 (985)
++|. ..+.||+|+||.||+|... +++.||||++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 3567999999999999865 78999999986542221 124778999999999999999999
Q ss_pred eeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 790 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
++...+..++||||++ |+|.+++.... .+++.....++.|++.||+|| |+.|++||||||+||+++.++.+|++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~L---H~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVL---HKWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHeEECCCCCEEECC
Confidence 9999999999999996 69999887543 588999999999999999999 789999999999999999999999999
Q ss_pred ccCceeccCCC------------CcceecccccccccccccccccCc-cchhhhcccccccchhhhcccccccCcchhhh
Q 001988 870 FGMAKLLSGED------------ESTMRTQTLATIGYMAPDEIFVGE-LSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA 936 (985)
Q Consensus 870 fGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~ 936 (985)
||.++.+.... .........+++.|+|||.+.+.. ++.++|+ |++|+.+++++++..+........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDM-WSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99998764111 011112234688899999987643 6889999 999999999999876543221100
Q ss_pred ---------------------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 ---------------------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 ---------------------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+++++.+++.+|+..+|++||++.|++.
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 00123567889999999999999999999986
No 369
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.6e-29 Score=251.64 Aligned_cols=232 Identities=21% Similarity=0.256 Sum_probs=189.9
Q ss_pred ceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 732 NIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
+.+|+|+|+.|--+. ..+|.+||||++.++......++.+|++++.+++ |+||++++++|++++.+|+|||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 679999999999987 6789999999999886667788999999999995 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC---cEEEecccCceeccCC-----CC
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHLSDFGMAKLLSGE-----DE 881 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~---~~kl~DfGla~~~~~~-----~~ 881 (985)
..++.+.. .+++.+..++..+|+.||.|| |.+||.|||+||+|||..+.. .+||+||.++.-+.-. ..
T Consensus 164 LshI~~~~-~F~E~EAs~vvkdia~aLdFl---H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 164 LSHIQKRK-HFNEREASRVVKDIASALDFL---HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred HHHHHHhh-hccHHHHHHHHHHHHHHHHHH---hhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 99998764 688889999999999999999 899999999999999996544 6899999887543321 12
Q ss_pred cceecccccccccccccccc-----cCccchhhhcccccccchhhhcccccccCcch-----------------------
Q 001988 882 STMRTQTLATIGYMAPDEIF-----VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK----------------------- 933 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~----------------------- 933 (985)
.+.....+|+..|||||++- ...|.-++|. |++|++++-|+.|..++...=
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDl-wSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI 318 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDL-WSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 318 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccH-HHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence 23345568999999999652 2345667788 999999999998876543210
Q ss_pred ---h----hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 934 ---H----FAAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 934 ---~----~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
. .......+.+..+++...+..||.+|-++.+++.
T Consensus 319 QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 319 QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0 0112235667778899999999999999988876
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=1.5e-28 Score=272.76 Aligned_cols=239 Identities=21% Similarity=0.291 Sum_probs=190.0
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCC------
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDD------ 795 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~------ 795 (985)
.++|...+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999865 6899999998654322 2345788999999999999999999875433
Q ss_pred --ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCc
Q 001988 796 --FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMA 873 (985)
Q Consensus 796 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla 873 (985)
..++||||++ +++.+.+......+++..+..++.|+++||+|| |+.||+||||||+||++++++.+||+|||++
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYL---HENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 4689999996 478887776656799999999999999999999 7899999999999999999999999999999
Q ss_pred eeccCCCCcc---------eecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhh------
Q 001988 874 KLLSGEDEST---------MRTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA------ 937 (985)
Q Consensus 874 ~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~------ 937 (985)
+......... ......+++.|+|||.+.+. .++.++|+ |++|++++++++|..+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDI-WGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHh-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 8754322111 11234578889999987654 57889999 9999999999998765432111000
Q ss_pred -----------------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 -----------------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 -----------------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.......+.+++.+|+..+|.+||++.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0112256889999999999999999999875
No 371
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=1.7e-28 Score=275.73 Aligned_cols=238 Identities=23% Similarity=0.298 Sum_probs=190.9
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeeecCC------
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCSNDD------ 795 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~------ 795 (985)
.++|...+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999864 789999999875422 22356789999999999999999999986543
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
..++|+||++. ++.++.. ..+++..+..++.|++.||+|| |+.+++||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYI---HSAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 45899999964 7776653 2578899999999999999999 789999999999999999999999999999876
Q ss_pred ccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh-----------------
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------------- 937 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------------- 937 (985)
.... .....+++.|+|||.+.+ ..++.++|+ |++|++++++++|+.+.........
T Consensus 167 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDI-WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCC-----CCCceeeecccChhhhcCccccCchHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 5321 123457889999999876 457889999 9999999999998865543211000
Q ss_pred -------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHhHh
Q 001988 938 -------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTITR--LLKIRD 975 (985)
Q Consensus 938 -------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~--L~~i~~ 975 (985)
....+.++.+++.+|+..||.+||++.+++.. ++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00123567899999999999999999999954 666654
No 372
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=4e-28 Score=265.94 Aligned_cols=233 Identities=24% Similarity=0.330 Sum_probs=188.9
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhc---CCCCeeeEEeeeecCCc-----
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNI---RHRNLVKIISSCSNDDF----- 796 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l---~h~niv~l~~~~~~~~~----- 796 (985)
|+..+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566789999999999999976 5899999999754322 234566788887766 59999999999988776
Q ss_pred eEEEEeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 797 KALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
.+++|||++ ++|.+++.... ..+++..+..++.|+++||+|| |+.+++||||+|+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L---H~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL---HSHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999996 48998887643 3589999999999999999999 788999999999999999999999999999988
Q ss_pred ccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh--------------------
Q 001988 876 LSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------------- 935 (985)
Q Consensus 876 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------------- 935 (985)
+..... .....++..|+|||.+.+..++.++|+ |++|+.+++++++..+.......
T Consensus 157 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di-~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDM-WSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCcc---cccccccccccChHHhccCCCCCcchh-hhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 643322 122347889999999999999999999 99999999999876543221100
Q ss_pred ------------------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 ------------------AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 ------------------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.........+.+++.+||..||.+||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 001123467789999999999999999999874
No 373
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=1.9e-28 Score=273.22 Aligned_cols=236 Identities=24% Similarity=0.350 Sum_probs=192.4
Q ss_pred HHHhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeec-CCce
Q 001988 722 LRATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSN-DDFK 797 (985)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~-~~~~ 797 (985)
...+++|+..+.||.|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 346788999999999999999999855 88999999886532 2234678899999999999999999999865 5578
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
++||||+ +++|.+++... .+++.....++.|+++||+|| |+.+|+||||+|+||++++++.+||+|||.+....
T Consensus 86 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~L---H~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYV---HSAGVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred EEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 8999998 56898888753 467888889999999999999 78999999999999999999999999999987643
Q ss_pred CCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhh---------------------
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------------- 935 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------------- 935 (985)
.. .....++..|+|||.+.+ ..++.++|+ |++|+.+++++++..+.......
T Consensus 160 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 160 PQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDI-WSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred CC-----cCCCcccccccCceeeeccCCcCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 21 122357889999998766 568899999 99999999999987654321100
Q ss_pred ------------------h---hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 936 ------------------A---AKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 936 ------------------~---~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+ ....+++++.+++++|++.+|++||++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 001235678999999999999999999998765
No 374
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=2.2e-28 Score=266.51 Aligned_cols=227 Identities=23% Similarity=0.259 Sum_probs=183.2
Q ss_pred eeeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHH---HHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 733 IIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEV---IKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~i---l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
.||+|+||.||+|... +++.||+|.+.+.... ....+..|..+ ++...||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 6889999998754221 12223444443 344579999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
||+|.+++...+ .+++..+..++.|++.|++|| |+++|+||||||+||+++.++.+||+|||+++.+.... .
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~ 152 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----C
Confidence 999999887653 689999999999999999999 78999999999999999999999999999987653222 1
Q ss_pred cccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchh---h-----------hhHHHHHHHHHHHHH
Q 001988 886 TQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH---F-----------AAKEQCLLSIFSLAL 950 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~---~-----------~~~~~~~~~l~~l~~ 950 (985)
....|+..|+|||.+..+ .++.+.|+ |++|+++++++++..+...... . ..+..++.++.+++.
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di-~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 231 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADW-FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 231 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccch-HhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHH
Confidence 234689999999998754 57888999 9999999999999876543210 0 011224578999999
Q ss_pred HccCCCCCCCC-----CHHHHHH
Q 001988 951 ECTMESPEKRI-----DAKDTIT 968 (985)
Q Consensus 951 ~cl~~~P~~RP-----t~~ev~~ 968 (985)
+|+..+|.+|| ++.++++
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 232 GLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHhhcCHHhccCCCCCCHHHHHh
Confidence 99999999999 8999875
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-28 Score=275.32 Aligned_cols=243 Identities=24% Similarity=0.348 Sum_probs=203.7
Q ss_pred HHHHHHhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeec---
Q 001988 719 FELLRATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSN--- 793 (985)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~--- 793 (985)
+.+...++.|.+.+.||.|.||.||+++ .++++.+|+|+..... ...++++.|.++++.. .|||++.++|++..
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 3334456778889999999999999998 4588999999988763 3446788899999887 69999999999853
Q ss_pred --CCceEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecc
Q 001988 794 --DDFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDF 870 (985)
Q Consensus 794 --~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~Df 870 (985)
++..|+|||||.+|+..|.++.. +..+.|..+.-|++.++.|+.+| |...++|||||-.|||++.++.||++||
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HL---H~nkviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHL---HNNKVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHH---hhcceeeecccCceEEEeccCcEEEeee
Confidence 57899999999999999998754 56789999999999999999999 8899999999999999999999999999
Q ss_pred cCceeccCCCCcceeccccccccccccccccc-----CccchhhhcccccccchhhhcccccccC--------------c
Q 001988 871 GMAKLLSGEDESTMRTQTLATIGYMAPDEIFV-----GELSLKRWVNDLLPVSLVEVVDKSLLSG--------------E 931 (985)
Q Consensus 871 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~~~~g~~~~~i~~~~~~~~--------------~ 931 (985)
|.+...+. +.......+|||.|||||++.. ..|+.++|+ |++|+...|+.+|..+.. .
T Consensus 168 GvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~-WsLGITaIEladG~PPl~DmHPmraLF~IpRNP 244 (953)
T KOG0587|consen 168 GVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDL-WSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 244 (953)
T ss_pred eeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccch-hhccceeehhcCCCCCccCcchhhhhccCCCCC
Confidence 99887742 3333455679999999998863 346778899 999999999998875432 2
Q ss_pred chhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 932 EKHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 932 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
++....++...+++.++|..|+..|-.+||++.++++
T Consensus 245 PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 245 PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 2333457788999999999999999999999998864
No 376
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=4.2e-28 Score=272.70 Aligned_cols=242 Identities=22% Similarity=0.283 Sum_probs=194.1
Q ss_pred cCHHHHHHHhcCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc--chHHHHHHHHHHHHhcCCCCeeeEEeeee
Q 001988 716 FSYFELLRATDNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA--STLKSFEAECEVIKNIRHRNLVKIISSCS 792 (985)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~h~niv~l~~~~~ 792 (985)
....++..+.++|...+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 33455666889999999999999999999985 4789999999875422 22456788999999999999999999885
Q ss_pred cC------CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEE
Q 001988 793 ND------DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866 (985)
Q Consensus 793 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~k 866 (985)
.. ...+++++++ +++|.+++... .+++..+..++.|+++|++|| |+.||+||||||+||++++++.+|
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEcCCCCEE
Confidence 43 3467888887 78998887654 588999999999999999999 789999999999999999999999
Q ss_pred EecccCceeccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh--------
Q 001988 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-------- 937 (985)
Q Consensus 867 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-------- 937 (985)
|+|||+++..... .....++..|+|||.+.+ ..++.++|+ |++|+.++++++++.+.........
T Consensus 161 l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 161 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDI-WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred Eeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 9999998764321 223458889999998766 567888999 9999999999998765432111000
Q ss_pred ---------------H-------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 938 ---------------K-------------------EQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 938 ---------------~-------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
. .....++.+++.+|++.+|.+||++.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0123567899999999999999999998864
No 377
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=4e-29 Score=249.61 Aligned_cols=233 Identities=23% Similarity=0.222 Sum_probs=190.2
Q ss_pred hcCccCC-ceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeec----CCce
Q 001988 725 TDNFAEN-NIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSN----DDFK 797 (985)
Q Consensus 725 ~~~~~~~-~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~----~~~~ 797 (985)
+++|++. ++||-|-.|.|..+..+ +++++|+|++.. ....++|++.--.. .|||||+++++++. ....
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4555543 57999999999999865 888999998753 25668899886655 69999999998854 3557
Q ss_pred EEEEeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc---CCCcEEEecccCc
Q 001988 798 ALVLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGMA 873 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~---~~~~~kl~DfGla 873 (985)
.+|||.++||.|++.+.+.+ ..+++.+.-+|+.||+.|+.|| |+.+|.||||||+|+|.. .+..+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~l---H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYL---HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH---HhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 79999999999999998774 4699999999999999999999 899999999999999996 4558999999999
Q ss_pred eeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch-------------------h
Q 001988 874 KLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-------------------H 934 (985)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------------~ 934 (985)
+.-. ........+.||+|.|||++-..+|+-.+|+ |++|+.++-++-|..++-... .
T Consensus 212 K~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdm-wSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP 287 (400)
T KOG0604|consen 212 KETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDM-WSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP 287 (400)
T ss_pred cccC---CCccccCCcccccccCHHHhCchhcCCCCCc-cchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC
Confidence 8742 2334556789999999999999999999999 999999888877654332110 1
Q ss_pred hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 935 FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 935 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
.+....+++...++++..++.+|.+|.|..+++..
T Consensus 288 ~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 288 EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 12345678889999999999999999999998753
No 378
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=3.4e-28 Score=273.19 Aligned_cols=233 Identities=23% Similarity=0.306 Sum_probs=189.9
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-----
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIRHRNLVKIISSCSNDD----- 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~h~niv~l~~~~~~~~----- 795 (985)
..++|+..+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999854 7899999998654222 2456789999999999999999999987653
Q ss_pred -ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 796 -FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 796 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
..++||||+ +++|.+++... .+++..+..++.|+++|++|| |+.||+||||||+||+++.++.+|++|||++.
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~L---H~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 358999999 77998888653 588999999999999999999 78999999999999999999999999999988
Q ss_pred eccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh----------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA---------------- 937 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~---------------- 937 (985)
..... .....+++.|+|||.+.. ..++.++|+ |++|+.+++++++..+.........
T Consensus 167 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di-~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 167 QTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDI-WSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred ccccC-----ccccccCCcccCHHHHhCCCCCCcHHHH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 65321 123357889999998876 457888999 9999999999998765432211000
Q ss_pred --------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 --------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 --------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+.+...+.+++.+|+..||.+||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0123456789999999999999999999983
No 379
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=3.2e-28 Score=265.92 Aligned_cols=234 Identities=25% Similarity=0.342 Sum_probs=193.3
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+..|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678999999999999865 68999999998653 223466788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcce
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTM 884 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 884 (985)
+ ++|.+++......+++..+.+++.|++.|++|| |+.||+||||+|+||++++++.+||+|||.++....... .
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~ 154 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYC---HSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--T 154 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--c
Confidence 7 599999987645789999999999999999999 788999999999999999999999999999987643221 1
Q ss_pred ecccccccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhh---------------------------
Q 001988 885 RTQTLATIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--------------------------- 936 (985)
Q Consensus 885 ~~~~~gt~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--------------------------- 936 (985)
.....++..|+|||.+... .++.+.|+ |++|+.+++++++..+........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv-~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDI-WSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccH-HHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 2223467789999998776 78889999 999999999999865543221100
Q ss_pred -------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.....+..+.+++.+|+..+|++||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00012457899999999999999999999875
No 380
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=5.2e-28 Score=270.71 Aligned_cols=236 Identities=22% Similarity=0.250 Sum_probs=186.6
Q ss_pred CccCCceeeccCceeEEEEEEc-C--CcEEEEEEeccCC--cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecC----Cc
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-D--GVEIAIKVFHPQC--ASTLKSFEAECEVIKNI-RHRNLVKIISSCSND----DF 796 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~--~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~----~~ 796 (985)
+|...+.||+|+||.||+|+.. + +..||+|++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999865 4 7789999987532 22345678899999999 599999999875432 45
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
.++++||++ ++|.+++... ..+++..+..++.|++.||+|| |+.||+||||||+||++++++.+||+|||+++.+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~L---H~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYI---HSANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 788999985 6899988754 3688999999999999999999 7899999999999999999999999999999876
Q ss_pred cCCCCc--ceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh-----------------
Q 001988 877 SGEDES--TMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA----------------- 936 (985)
Q Consensus 877 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~----------------- 936 (985)
...... .......|++.|+|||.+.+ ..++.++|+ |++|+.+++++.+..+........
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di-~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDV-WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHH-HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 432211 11233468999999998765 467889999 999999999998876543211000
Q ss_pred -------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....+...+.+++.+|++.+|.+||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00012457889999999999999999999874
No 381
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=2e-28 Score=264.14 Aligned_cols=235 Identities=21% Similarity=0.281 Sum_probs=190.6
Q ss_pred CccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-----cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-----ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv 800 (985)
+|...+.||+|+||.||+|... .+..+++|.++... .....++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999865 34456666654321 22334577899999999999999999999999999999
Q ss_pred EeccCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 801 LEYMSNGSLEDCLHS---SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 801 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
|||+++++|.+++.. ....+++...+.++.|+++|++|| |+.|++||||||+||++++ +.+||+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYM---HQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHH---HHcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 245689999999999999999999 7899999999999999975 569999999998764
Q ss_pred CCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh------------hhhHHHHHHHH
Q 001988 878 GEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH------------FAAKEQCLLSI 945 (985)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~------------~~~~~~~~~~l 945 (985)
.... ......+++.|+|||......++.+.|+ |++|+++++++++..+...... ...+..++.++
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv-~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDI-WSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQL 233 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhH-HHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHH
Confidence 3222 2223458889999999888888889999 9999999999987765432211 11233466789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 001988 946 FSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.+++.+|+..+|++||++.|+++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhh
Confidence 99999999999999999999975
No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=7.4e-30 Score=250.79 Aligned_cols=235 Identities=24% Similarity=0.297 Sum_probs=187.3
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc-chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEecc
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA-STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.+....||.|+||+|++-.++ .|+..|||+++...- .+.+++..|.+...+- +.||||++||++...+..||-||+|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 334567999999999998865 899999999987644 5677888999876555 6899999999999989999999999
Q ss_pred CCCChHHHhh---c-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCC
Q 001988 805 SNGSLEDCLH---S-SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 805 ~~gsL~~~l~---~-~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~ 880 (985)
. -++..+.+ . +...+++.-.-.|+...+.||.||. .+..|||||+||+|||+|..|.+||||||++-.+.+
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK--~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-- 220 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLK--EELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-- 220 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHH--HHhhhhhccCChhheEEecCCCEeeecccchHhHHH--
Confidence 4 46654432 1 2345777777788888899999997 566799999999999999999999999999866532
Q ss_pred Ccceecccccccccccccccc--cCccchhhhcccccccchhhhcccccccCcchh-hh--------------hHHH---
Q 001988 881 ESTMRTQTLATIGYMAPDEIF--VGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-FA--------------AKEQ--- 940 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-~~--------------~~~~--- 940 (985)
....+.-+|...|||||.+. +..+..++|+ |++|+.++|+.+|..+...... .+ .+.+
T Consensus 221 -SiAkT~daGCrpYmAPERi~p~~~gyDiRSDv-WSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~ 298 (361)
T KOG1006|consen 221 -SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDV-WSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVH 298 (361)
T ss_pred -HHHhhhccCCccccChhccCCccCCcchhhhh-hhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccc
Confidence 22334456999999999874 4568999999 9999999999999877654321 11 1222
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
....+..++..|+..|-..||.+.++.+.
T Consensus 299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 299 YSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 45678999999999999999999988653
No 383
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=3.6e-28 Score=273.05 Aligned_cols=237 Identities=21% Similarity=0.302 Sum_probs=189.1
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecC---------
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSND--------- 794 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~--------- 794 (985)
..+|...+.||.|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367889999999999999999864 7899999998766555667788999999999999999999876543
Q ss_pred -----CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc-CCCcEEEe
Q 001988 795 -----DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAHLS 868 (985)
Q Consensus 795 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~-~~~~~kl~ 868 (985)
...++||||++ ++|.+++... .+++...+.++.|+++||+|| |+.||+||||||+||+++ +++.+|++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~L---H~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 5898888653 578999999999999999999 789999999999999997 45678999
Q ss_pred cccCceeccCCCCcc-eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhh----------
Q 001988 869 DFGMAKLLSGEDEST-MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA---------- 936 (985)
Q Consensus 869 DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~---------- 936 (985)
|||.++......... ......++..|+|||.+.. ..++.++|+ |++|+.+++++++..+........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di-wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM-WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhH-HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999998754221111 1122357889999998754 457788999 999999999999886553211000
Q ss_pred -------------------------------hHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 937 -------------------------------AKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 937 -------------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
.......++.+++.+|+..||.+||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00113456788999999999999999999984
No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6e-29 Score=257.35 Aligned_cols=232 Identities=23% Similarity=0.225 Sum_probs=190.7
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 798 (985)
...+|....+||+|+||.|.+|..+ +.+.||||+++++.- .+.+-.+.|-++|+.- +-|.+++++.+++..+..|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3457888999999999999999866 566799999987732 2334456777888766 5789999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
.||||+.||+|--++.+-+ .+.+....-+|..||-||-+| |++|||+||+|.+|||+|.+|++||+|||+++.--
T Consensus 427 FVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFL---h~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni- 501 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI- 501 (683)
T ss_pred eEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhh---hcCCeeeeeccccceEeccCCceEeeecccccccc-
Confidence 9999999999998888765 566777888999999999999 89999999999999999999999999999997532
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh-----------HHHHHHHHHH
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-----------KEQCLLSIFS 947 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~ 947 (985)
-....+...+|||.|+|||++..++|.-..|. |++|+.++||+.|..+.....+... +...+.+...
T Consensus 502 -~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDW-Wa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ 579 (683)
T KOG0696|consen 502 -FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW-WAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVA 579 (683)
T ss_pred -cCCcceeeecCCCcccccceEEecccccchhH-HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHH
Confidence 22344567899999999999999999766665 9999999999999887665433221 2234567778
Q ss_pred HHHHccCCCCCCCCC
Q 001988 948 LALECTMESPEKRID 962 (985)
Q Consensus 948 l~~~cl~~~P~~RPt 962 (985)
+.+..+...|.+|..
T Consensus 580 ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 580 ICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHHhhcCCccccC
Confidence 888889999988863
No 385
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95 E-value=4.2e-28 Score=272.58 Aligned_cols=233 Identities=24% Similarity=0.314 Sum_probs=191.2
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCc----
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDF---- 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~---- 796 (985)
..++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4578999999999999999999875 68899999987542 2234567789999999999999999998866554
Q ss_pred --eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 797 --KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 797 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
.++|+||+ +++|.+++... .+++..+..++.|+++|++|| |+.||+||||||+||++++++.+||+|||++.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYI---HSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 67999988763 589999999999999999999 78999999999999999999999999999998
Q ss_pred eccCCCCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhhhh----------------
Q 001988 875 LLSGEDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA---------------- 937 (985)
Q Consensus 875 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~---------------- 937 (985)
..... .....++..|+|||.+.. ..++.++|+ |++|+.++++++|..+.........
T Consensus 167 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv-wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 167 HTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDI-WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccc-----ccCCcccccccCHHHHhCCCCCCchHhH-HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 75322 223457889999998765 367889999 9999999999998865432211000
Q ss_pred --------------------------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 938 --------------------------KEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 938 --------------------------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
....++++.+++.+|+..+|++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0113567889999999999999999999875
No 386
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=5.3e-28 Score=259.20 Aligned_cols=225 Identities=29% Similarity=0.301 Sum_probs=190.5
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCCh
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
||+|+||.||++... +++.||+|.+...... ....+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999865 6899999998765322 355788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccc
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTL 889 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 889 (985)
.+++.... .+++.....++.|+++|+.|+ |+.+++|+||+|+||+++.++.++|+|||.+....... .......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---h~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYL---HSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFC 154 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCc
Confidence 99998764 578999999999999999999 78999999999999999999999999999998764322 1223446
Q ss_pred cccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-----------hHHHHHHHHHHHHHHccCCCCC
Q 001988 890 ATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-----------AKEQCLLSIFSLALECTMESPE 958 (985)
Q Consensus 890 gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~l~~l~~~cl~~~P~ 958 (985)
++..|+|||...+...+.++|+ |++|+.+++++++..+........ .+...+.++.+++++|+..+|+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~-~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~ 233 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDW-WSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233 (250)
T ss_pred CCccccChHHhCCCCCCchhhH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHh
Confidence 8889999999988888999999 999999999999887654332111 1222367789999999999999
Q ss_pred CCCCHHH
Q 001988 959 KRIDAKD 965 (985)
Q Consensus 959 ~RPt~~e 965 (985)
+||++.+
T Consensus 234 ~R~~~~~ 240 (250)
T cd05123 234 KRLGSGG 240 (250)
T ss_pred hCCCccc
Confidence 9999954
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=6.9e-30 Score=248.72 Aligned_cols=239 Identities=22% Similarity=0.331 Sum_probs=189.0
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcCCCCeeeEEeeeec--------C
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIRHRNLVKIISSCSN--------D 794 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~h~niv~l~~~~~~--------~ 794 (985)
..|....+||+|.||+||+|+.+ +|++||+|++-.+. ........+|+++++.++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 44566678999999999999865 78889999764332 2334567899999999999999999998843 3
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
...|+||++|+. +|...+......++..++.+++.++.+||.|+ |+..|+|||+||+|++|+.+|.+||+|||+|+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~i---Hr~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYI---HRNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHH---HHhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 458999999976 89988887767899999999999999999999 89999999999999999999999999999998
Q ss_pred eccCCCC--cceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCcchhh----------------
Q 001988 875 LLSGEDE--STMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------- 935 (985)
Q Consensus 875 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------- 935 (985)
.+...+. ....+..+-|..|.+||.+.+ ..++.+.|+ |..|+++.||.++..........
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDi-WgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDI-WGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchh-HhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 8764332 223445567999999998875 668899999 88888888888765432211000
Q ss_pred --h----------------------hHHH------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 936 --A----------------------AKEQ------CLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 936 --~----------------------~~~~------~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
+ ..+. ..++..+++..++..||.+|+++++++..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 0 0011 12367789999999999999999998754
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=5.4e-28 Score=256.76 Aligned_cols=214 Identities=20% Similarity=0.120 Sum_probs=176.1
Q ss_pred cCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHHHhhc
Q 001988 737 GGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHS 815 (985)
Q Consensus 737 G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 815 (985)
|.||.||+++.. +++.||+|+++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999865 78999999987542 234455555666799999999999999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccccccccc
Q 001988 816 SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895 (985)
Q Consensus 816 ~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~ 895 (985)
.. .+++.....++.|+++||+|+ |+++|+||||||+||+++.++.++++|||.+....... ....++..|+
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y~ 149 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDAL---HREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMYC 149 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCcccc
Confidence 53 588999999999999999999 78999999999999999999999999999876653211 2234677899
Q ss_pred cccccccCccchhhhcccccccchhhhcccccccCcchh-------hhhHHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001988 896 APDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH-------FAAKEQCLLSIFSLALECTMESPEKRIDAKD 965 (985)
Q Consensus 896 aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~-------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~e 965 (985)
|||......++.++|+ |++|++++++++|..+....+. ...+...++.+.+++.+|++.||++||++.+
T Consensus 150 aPE~~~~~~~~~~~Dv-wslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 150 APEVGGISEETEACDW-WSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CCcccCCCCCCchhhH-HHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 9999988888999999 9999999999998754322111 1122345677899999999999999999743
No 389
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=2.1e-27 Score=287.23 Aligned_cols=145 Identities=29% Similarity=0.452 Sum_probs=130.8
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
++|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+..|+.+++.++||||+++++++...++.|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67888999999999999999976 789999999975422 22467889999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCce
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAK 874 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~ 874 (985)
||+++++|.+++...+ .+++...++++.||+.||+|| |+++||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yL---H~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYL---HRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997654 578889999999999999999 78899999999999999999999999999986
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=9.9e-28 Score=248.54 Aligned_cols=233 Identities=21% Similarity=0.265 Sum_probs=191.6
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcC-C-C----CeeeEEeeeecCCce
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-H-R----NLVKIISSCSNDDFK 797 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-h-~----niv~l~~~~~~~~~~ 797 (985)
+.+|.+...+|+|.||.|..+.+. .+..||+|+++.- ..-.+..+-|+++++++. + | -+|++.+|+...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678889999999999999999854 5788999998632 333456788999999993 2 3 388899999999999
Q ss_pred EEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC---------------
Q 001988 798 ALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE--------------- 861 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~--------------- 861 (985)
+||+|.+ |.++.+++..+ ..+++..++..|++|++++++|| |+.+++|-|+||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fL---h~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFL---HDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHH---HhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999998 77999999986 45688999999999999999999 8999999999999999932
Q ss_pred -----CCcEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh
Q 001988 862 -----DMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA 936 (985)
Q Consensus 862 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~ 936 (985)
+..+||+|||.|+.-. .....++.|..|.|||++++-+++.++|| ||+|+.+.|+.+|+.++......+
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~-----e~hs~iVsTRHYRAPEViLgLGwS~pCDv-WSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH-----EHHSTIVSTRHYRAPEVILGLGWSQPCDV-WSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred eccCCCcceEEEecCCcceec-----cCcceeeeccccCCchheeccCcCCccCc-eeeeeEEEEeeccceecccCCcHH
Confidence 3368999999998742 22356789999999999999999999999 999999999988875432111000
Q ss_pred ---------------------------------------------------------hHHHHHHHHHHHHHHccCCCCCC
Q 001988 937 ---------------------------------------------------------AKEQCLLSIFSLALECTMESPEK 959 (985)
Q Consensus 937 ---------------------------------------------------------~~~~~~~~l~~l~~~cl~~~P~~ 959 (985)
..+....++++++++|+.+||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 00113567999999999999999
Q ss_pred CCCHHHHHH
Q 001988 960 RIDAKDTIT 968 (985)
Q Consensus 960 RPt~~ev~~ 968 (985)
|+|+.|++.
T Consensus 397 RiTl~EAL~ 405 (415)
T KOG0671|consen 397 RITLREALS 405 (415)
T ss_pred cccHHHHhc
Confidence 999999875
No 391
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-28 Score=266.23 Aligned_cols=231 Identities=22% Similarity=0.236 Sum_probs=194.1
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~ 801 (985)
+++.|.....+|.|+|+.|-.+... +++..|+|++.+.. .+..+|+.++... +||||+++.+.+.+..+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 3566777788999999999999854 78889999997662 3345678777666 6999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE-cCCCcEEEecccCceeccCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL-DEDMVAHLSDFGMAKLLSGED 880 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill-~~~~~~kl~DfGla~~~~~~~ 880 (985)
|++.|+-+.+.+..... .. .++..|+.+|+.|+.|| |++||||||+||+|||+ ++.++++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~L---H~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYL---HEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHH---HhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999998888876542 22 56677999999999999 88999999999999999 69999999999999876432
Q ss_pred CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh----------HHHHHHHHHHHHH
Q 001988 881 ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA----------KEQCLLSIFSLAL 950 (985)
Q Consensus 881 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~----------~~~~~~~l~~l~~ 950 (985)
....+-|..|.|||++...+++.++|+ |++|+++++|++|..+....+.... .+..+++..++++
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~-WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDW-WSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhh-HHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHH
Confidence 334468899999999999999999999 9999999999999987765543311 1446788999999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 001988 951 ECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 951 ~cl~~~P~~RPt~~ev~~~ 969 (985)
.|++.||.+||+|.++...
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HhccCChhhCcChhhhccC
Confidence 9999999999999998764
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=4.6e-27 Score=276.85 Aligned_cols=237 Identities=22% Similarity=0.247 Sum_probs=164.0
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-C----CcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEee------ee
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-D----GVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISS------CS 792 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~----~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~------~~ 792 (985)
..++|...+.||+|+||.||+|++. + +..||+|++...... +....| .++...+.+++.+... +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999975 4 689999987643211 111111 1112222222222221 24
Q ss_pred cCCceEEEEeccCCCChHHHhhcCCCCC-------------------CHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 001988 793 NDDFKALVLEYMSNGSLEDCLHSSNCAL-------------------NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLK 853 (985)
Q Consensus 793 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk 853 (985)
.....++||||+++++|.+++....... ....+..++.|++.||+|| |+++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yL---H~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGL---HSTGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHH---HHCCEEeCcCC
Confidence 5667899999999999999987543111 1234567999999999999 78999999999
Q ss_pred CCCEEEcC-CCcEEEecccCceeccCCCCcceecccccccccccccccccCc----------------------cchhhh
Q 001988 854 PSNVLLDE-DMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGE----------------------LSLKRW 910 (985)
Q Consensus 854 ~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~d 910 (985)
|+|||+++ ++.+||+|||+|+.+.... ........+++.|||||.+.... ++.+.|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999986 6899999999998764322 22234467899999999654322 233459
Q ss_pred cccccccchhhhcccccccCcch------------hhhh---------HHH----------HHHHHHHHHHHccCCCCCC
Q 001988 911 VNDLLPVSLVEVVDKSLLSGEEK------------HFAA---------KEQ----------CLLSIFSLALECTMESPEK 959 (985)
Q Consensus 911 v~~~~g~~~~~i~~~~~~~~~~~------------~~~~---------~~~----------~~~~l~~l~~~cl~~~P~~ 959 (985)
+ |++|++++|++.+.+...... .... ..+ ......+++.+|+..||.+
T Consensus 362 V-wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 362 I-YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred c-HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 9 999999999987654322110 0000 000 0122447999999999999
Q ss_pred CCCHHHHHHH
Q 001988 960 RIDAKDTITR 969 (985)
Q Consensus 960 RPt~~ev~~~ 969 (985)
|||+.|+++.
T Consensus 441 R~ta~e~L~H 450 (566)
T PLN03225 441 RISAKAALAH 450 (566)
T ss_pred CCCHHHHhCC
Confidence 9999999874
No 393
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=2.4e-27 Score=257.35 Aligned_cols=211 Identities=22% Similarity=0.319 Sum_probs=173.4
Q ss_pred CHHHHHHHh---cCccCCceeeccCceeEEEEEE-cCCcEEEEEEeccCCc---chHHHHHHHHHHHHhcCCCCeeeEEe
Q 001988 717 SYFELLRAT---DNFAENNIIGIGGFGSVYRARL-EDGVEIAIKVFHPQCA---STLKSFEAECEVIKNIRHRNLVKIIS 789 (985)
Q Consensus 717 ~~~~~~~~~---~~~~~~~~ig~G~~g~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~h~niv~l~~ 789 (985)
.|..+.++. .-|.+.+-||-|+||+|.+++. ++...||.|.+++... .....++.|-+||+.-..+-||++|.
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 345555554 3477888999999999999974 4556699999986632 23456788999999999999999999
Q ss_pred eeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 790 SCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 790 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
.|++++.+|+||||++||++-..|...+ .+.+.....++.++..|+++. |..|+|||||||+|||||.+|++||.|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesV---HkmGFIHRDiKPDNILIDrdGHIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHH---HhccceecccCccceEEccCCceeeee
Confidence 9999999999999999999999988765 677777788889999999999 899999999999999999999999999
Q ss_pred ccCceecc--------CCCCc--------------------------------ceecccccccccccccccccCccchhh
Q 001988 870 FGMAKLLS--------GEDES--------------------------------TMRTQTLATIGYMAPDEIFVGELSLKR 909 (985)
Q Consensus 870 fGla~~~~--------~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~ 909 (985)
||+++=+. ..+.. ......+||+.|+|||++....++-.+
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 99986421 00000 011235799999999999999998777
Q ss_pred hcccccccchhhhcccccccCcc
Q 001988 910 WVNDLLPVSLVEVVDKSLLSGEE 932 (985)
Q Consensus 910 dv~~~~g~~~~~i~~~~~~~~~~ 932 (985)
|. |+.|++++||+.|..++...
T Consensus 853 dw-ws~gvil~em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 853 DW-WSVGVILYEMLVGQPPFLAD 874 (1034)
T ss_pred hh-hHhhHHHHHHhhCCCCccCC
Confidence 76 99999999999998876543
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-27 Score=266.80 Aligned_cols=230 Identities=27% Similarity=0.391 Sum_probs=184.9
Q ss_pred ccCCceeeccCcee-EEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEeccC
Q 001988 728 FAENNIIGIGGFGS-VYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 728 ~~~~~~ig~G~~g~-V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
|...+++|.|+.|+ ||+|..+ |++||||++-.. ..+.+++|+..++.- +|||||++++.-+++...||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 45556789999887 8999995 899999988643 345678999999988 69999999999999999999999995
Q ss_pred CCChHHHhhcCCCCC---CHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC---C--CcEEEecccCceecc
Q 001988 806 NGSLEDCLHSSNCAL---NIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE---D--MVAHLSDFGMAKLLS 877 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~---~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~---~--~~~kl~DfGla~~~~ 877 (985)
.+|.++++...... .....+.+..|++.||++| |+.+|||||+||.||||+. + .+++|+|||+++.+.
T Consensus 587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL---Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHL---HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHH---HhcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 59999998741111 1133467889999999999 8999999999999999975 3 479999999999987
Q ss_pred CCCCcc-eecccccccccccccccccCccchhhhcccccccchhhhccc-ccccCcchhhh--------------hHHHH
Q 001988 878 GEDEST-MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDK-SLLSGEEKHFA--------------AKEQC 941 (985)
Q Consensus 878 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~-~~~~~~~~~~~--------------~~~~~ 941 (985)
...... ......||-+|+|||++....-+.+.|+ +++|++++-++++ ..+++.....+ ..++|
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDi-FslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~ 741 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDI-FSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDC 741 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccch-hhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchH
Confidence 544332 3456679999999999999888889999 9999998888876 55555432221 11222
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 942 LLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 942 ~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+..++|.+|+.++|..||+|.+|+.
T Consensus 742 --eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 742 --EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 7889999999999999999999963
No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.1e-26 Score=266.08 Aligned_cols=240 Identities=18% Similarity=0.224 Sum_probs=175.9
Q ss_pred HhcCccCCceeeccCceeEEEEEE-----------------cCCcEEEEEEeccCCcchHH--------------HHHHH
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARL-----------------EDGVEIAIKVFHPQCASTLK--------------SFEAE 772 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~-----------------~~~~~vAvK~~~~~~~~~~~--------------~~~~E 772 (985)
..++|+..++||+|+||.||+|.. .+++.||||++........+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 24567999998754332222 23457
Q ss_pred HHHHHhcCCCCe-----eeEEeeeec--------CCceEEEEeccCCCChHHHhhcCC----------------------
Q 001988 773 CEVIKNIRHRNL-----VKIISSCSN--------DDFKALVLEYMSNGSLEDCLHSSN---------------------- 817 (985)
Q Consensus 773 ~~il~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~---------------------- 817 (985)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777876554 677787753 356899999999999999987431
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccccccccccc
Q 001988 818 -CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMA 896 (985)
Q Consensus 818 -~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~a 896 (985)
...++..+..++.|+++||+|+ |+.+|+||||||+||+++.++.+||+|||+++.+..... .......+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~l---H~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKL---HRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 1235677889999999999999 788999999999999999999999999999976542211 11122235889999
Q ss_pred ccccccCcc----------------------chhhhcccccccchhhhcccccccCcc-h--------------------
Q 001988 897 PDEIFVGEL----------------------SLKRWVNDLLPVSLVEVVDKSLLSGEE-K-------------------- 933 (985)
Q Consensus 897 PE~~~~~~~----------------------~~~~dv~~~~g~~~~~i~~~~~~~~~~-~-------------------- 933 (985)
||.+..... ....|+ |++|+++++|+.+.+..... .
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~Dv-wSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~ 457 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDS-YTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK 457 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccch-hhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc
Confidence 998764321 123588 99999999999876522110 0
Q ss_pred ----hhhhHHHHHHHHHHHHHHccCCCC---CCCCCHHHHHH
Q 001988 934 ----HFAAKEQCLLSIFSLALECTMESP---EKRIDAKDTIT 968 (985)
Q Consensus 934 ----~~~~~~~~~~~l~~l~~~cl~~~P---~~RPt~~ev~~ 968 (985)
..+..+.+.+...+++.+++..+| .+|+++.|+++
T Consensus 458 ~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 011112345678889999999765 68999999875
No 396
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-28 Score=260.68 Aligned_cols=229 Identities=21% Similarity=0.283 Sum_probs=194.4
Q ss_pred cCccCCceeeccCceeEEEEEEcCCc-EEEEEEeccCC---cchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLEDGV-EIAIKVFHPQC---ASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~~~-~vAvK~~~~~~---~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
.+++...-+|-||||.|-++..+... .+|+|.+++.. ....+.+..|-.||..++.|.||++|..|.+..+.|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 44555667999999999999876333 48999887652 233456788999999999999999999999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDE 881 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 881 (985)
|-|-||.+...++..+ .++..+...++..+++|++|| |++|||+||+||+|.++|.+|.+||.|||+|+.+....
T Consensus 500 EaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYL---H~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~- 574 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYL---HRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR- 574 (732)
T ss_pred HhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHH---HhcCceeccCChhheeeccCCceEEeehhhHHHhccCC-
Confidence 9999999999998875 688888888999999999999 89999999999999999999999999999999885433
Q ss_pred cceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh-------------hhHHHHHHHHHHH
Q 001988 882 STMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------AAKEQCLLSIFSL 948 (985)
Q Consensus 882 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------~~~~~~~~~l~~l 948 (985)
.+..+||||.|.|||++....-..+.|. |++|+.++|+++|..++...... .-|........++
T Consensus 575 --KTwTFcGTpEYVAPEIILnKGHD~avDy-WaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~L 651 (732)
T KOG0614|consen 575 --KTWTFCGTPEYVAPEIILNKGHDRAVDY-WALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDL 651 (732)
T ss_pred --ceeeecCCcccccchhhhccCcchhhHH-HHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHH
Confidence 3456899999999999999999999999 99999999999998876554221 1233456677889
Q ss_pred HHHccCCCCCCCCC
Q 001988 949 ALECTMESPEKRID 962 (985)
Q Consensus 949 ~~~cl~~~P~~RPt 962 (985)
|++.++.+|.+|-.
T Consensus 652 ik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 652 IKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHhcCcHhhhc
Confidence 99999999999875
No 397
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-27 Score=239.56 Aligned_cols=231 Identities=23% Similarity=0.230 Sum_probs=189.8
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 798 (985)
...+|...++||+|+|+.|..++++ +.+.||+|++++... .+.+.++.|-.+..+. +||.+|-++.+++.....+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3467888999999999999999965 678899999987632 3455677888888776 7999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
+|.||++||+|--++..++ .++++....+...|.-||.|| |++|||+||+|.+||++|..|++|+.|+|+++.--
T Consensus 328 fvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~fl---h~rgiiyrdlkldnvlldaeghikltdygmcke~l- 402 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL- 402 (593)
T ss_pred EEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHH---hhcCeeeeeccccceEEccCCceeecccchhhcCC-
Confidence 9999999999987777664 577888888999999999999 89999999999999999999999999999998632
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch---hhhhHHH---------------
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK---HFAAKEQ--------------- 940 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~---~~~~~~~--------------- 940 (985)
.....++..+|||.|+|||.+.+..|.+..|. |++|+.++||+.|+.++.... .....++
T Consensus 403 -~~gd~tstfcgtpnyiapeilrgeeygfsvdw-walgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr 480 (593)
T KOG0695|consen 403 -GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDW-WALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR 480 (593)
T ss_pred -CCCcccccccCCCcccchhhhcccccCceehH-HHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc
Confidence 33345677899999999999999999998876 999999999999987654321 1111111
Q ss_pred -HHHHHHHHHHHccCCCCCCCC
Q 001988 941 -CLLSIFSLALECTMESPEKRI 961 (985)
Q Consensus 941 -~~~~l~~l~~~cl~~~P~~RP 961 (985)
.+.....+++.-+..||++|.
T Consensus 481 slsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 481 SLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred eeehhhHHHHHHhhcCCcHHhc
Confidence 223344577888888998875
No 398
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3e-27 Score=246.61 Aligned_cols=241 Identities=26% Similarity=0.353 Sum_probs=194.0
Q ss_pred hcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcc-------hHHHHHHHHHHHHhcCCCCeeeEEeeee-cCC
Q 001988 725 TDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCAS-------TLKSFEAECEVIKNIRHRNLVKIISSCS-NDD 795 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~-------~~~~~~~E~~il~~l~h~niv~l~~~~~-~~~ 795 (985)
.++|-...++|+|||++||+|. ....+.||||+-...... -.+...+|.+|-+.+.||.||++|+|+. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 4567778899999999999997 456788999986543211 1345689999999999999999999996 456
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc---CCCcEEEecccC
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHLSDFGM 872 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~---~~~~~kl~DfGl 872 (985)
.++-|+|||+|-+|.-+++.+. .+++.+...|+.||+.||.||.. -+.+|||=|+||.|||+. ..|.+||.|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 7889999999999999998764 68899999999999999999954 577899999999999994 568999999999
Q ss_pred ceeccCCCCc-----ceecccccccccccccccccC----ccchhhhcccccccchhhhcccccccCcchhh--------
Q 001988 873 AKLLSGEDES-----TMRTQTLATIGYMAPDEIFVG----ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------- 935 (985)
Q Consensus 873 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------- 935 (985)
++.++++... ..+...+||++|++||.+.-+ ..+-+.|| |+.|+.++..+-|+.+++..-.-
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDV-WSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDV-WSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceee-EeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 9998765443 234667899999999987654 35678899 99999999999888777654211
Q ss_pred ---------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 936 ---------AAKEQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 936 ---------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+....+..+...+|++|+.+.-++|....++..
T Consensus 699 IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 699 ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 112235567788999999998888887777653
No 399
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=6e-27 Score=241.62 Aligned_cols=255 Identities=19% Similarity=0.249 Sum_probs=204.5
Q ss_pred HHHHHHhcCccCCceeeccCceeEEEEEEc------CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeee
Q 001988 719 FELLRATDNFAENNIIGIGGFGSVYRARLE------DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSC 791 (985)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~ 791 (985)
.++.....+++....+.+|.||+||+|.+. +.+.|-+|.++....+ ....+..|--.+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 344445566777788999999999999654 3445677777644222 345567888888888999999999998
Q ss_pred ecC-CceEEEEeccCCCChHHHhhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC
Q 001988 792 SND-DFKALVLEYMSNGSLEDCLHSS-------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863 (985)
Q Consensus 792 ~~~-~~~~lv~e~~~~gsL~~~l~~~-------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~ 863 (985)
.+. +..++.+.+..-|+|..++... .+.++..+...++.|++.|++|| |++||||.||.++|.+||+.-
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl---h~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL---HNHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH---HhcCcccchhhhhcceehhhe
Confidence 654 5678889999999999999822 23466677788999999999999 899999999999999999999
Q ss_pred cEEEecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcc-cccccCcc----------
Q 001988 864 VAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVD-KSLLSGEE---------- 932 (985)
Q Consensus 864 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~-~~~~~~~~---------- 932 (985)
.+||+|=.+++.+-+.+........-....||+||.+....++.++|+ |+||+.+||+++ |+.+..+.
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDv-WsfGVllWELmtlg~~PyaeIDPfEm~~ylk 512 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDV-WSFGVLLWELMTLGKLPYAEIDPFEMEHYLK 512 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhh-HHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence 999999999988755554443333446778999999999999999999 999999999987 33333322
Q ss_pred --hhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 933 --KHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 933 --~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
.+..++-.|+++++.+|.-||...|++||++++++.-|.++...+
T Consensus 513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 123355669999999999999999999999999999999876543
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=2.7e-26 Score=244.31 Aligned_cols=223 Identities=32% Similarity=0.400 Sum_probs=189.4
Q ss_pred CceeEEEEEEc-CCcEEEEEEeccCCcch-HHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHHHhhc
Q 001988 738 GFGSVYRARLE-DGVEIAIKVFHPQCAST-LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHS 815 (985)
Q Consensus 738 ~~g~V~~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 815 (985)
+||.||+|... +++.||+|++....... .+.+.+|++.+++++|+|++++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 58999999998765444 67899999999999999999999999998999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccccccccc
Q 001988 816 SNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYM 895 (985)
Q Consensus 816 ~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~ 895 (985)
.. .+++.....++.++++++.|| |+.+++|+||+|+||++++++.++++|||.+....... ......++..|+
T Consensus 81 ~~-~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG-RLSEDEARFYARQILSALEYL---HSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYM 153 (244)
T ss_pred cc-CCCHHHHHHHHHHHHHHHHHH---HHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCC
Confidence 54 378999999999999999999 78899999999999999999999999999998764322 223445888999
Q ss_pred cccccccCccchhhhcccccccchhhhcccccccCcchhhh------------h-HHH--HHHHHHHHHHHccCCCCCCC
Q 001988 896 APDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA------------A-KEQ--CLLSIFSLALECTMESPEKR 960 (985)
Q Consensus 896 aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~------------~-~~~--~~~~l~~l~~~cl~~~P~~R 960 (985)
|||......++.+.|+ |++|+.+++++++..+........ . ... ++.++.+++.+|+..+|++|
T Consensus 154 ~pE~~~~~~~~~~~Di-~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 232 (244)
T smart00220 154 APEVLLGKGYGKAVDV-WSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKR 232 (244)
T ss_pred CHHHHccCCCCchhhH-HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhc
Confidence 9999988889999999 899999999999876543311110 0 001 56789999999999999999
Q ss_pred CCHHHHHH
Q 001988 961 IDAKDTIT 968 (985)
Q Consensus 961 Pt~~ev~~ 968 (985)
|++.++++
T Consensus 233 p~~~~~~~ 240 (244)
T smart00220 233 LTAEEALQ 240 (244)
T ss_pred cCHHHHhh
Confidence 99999986
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-27 Score=258.06 Aligned_cols=237 Identities=24% Similarity=0.355 Sum_probs=197.8
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
.++|...+.+|.|.||.||||+.. +++..|+|+++.....+.+.+++|+-+++.++|||||.++|.+..++..++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467888899999999999999854 7899999999988777778889999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDEST 883 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 883 (985)
|.||+|++.-+..+ ++++.++..+++...+|++|| |+.|-+|||||-.||++++.|.+|++|||.+..+. ....
T Consensus 94 cgggslQdiy~~Tg-plselqiayvcRetl~gl~yl---hs~gk~hRdiKGanilltd~gDvklaDfgvsaqit--ati~ 167 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYL---HSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT--ATIA 167 (829)
T ss_pred cCCCcccceeeecc-cchhHHHHHHHhhhhccchhh---hcCCcccccccccceeecccCceeecccCchhhhh--hhhh
Confidence 99999999877654 788888888899999999999 89999999999999999999999999999987663 2223
Q ss_pred eecccccccccccccccc---cCccchhhhcccccccchhhhcccc--cccC--------------cchhhhhHHHHHHH
Q 001988 884 MRTQTLATIGYMAPDEIF---VGELSLKRWVNDLLPVSLVEVVDKS--LLSG--------------EEKHFAAKEQCLLS 944 (985)
Q Consensus 884 ~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~~~~g~~~~~i~~~~--~~~~--------------~~~~~~~~~~~~~~ 944 (985)
....+.||++|||||+.. .+.|...+|+ |+.|+.+.|.-.-. ++.- ..+.........+.
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdi-wa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~ 246 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDI-WALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEF 246 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccc-cccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHH
Confidence 345678999999999764 6778899999 88887766653311 1111 11222334456788
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 001988 945 IFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 945 l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
+.++++.|+..+|++||++..++.
T Consensus 247 fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhhee
Confidence 999999999999999999987765
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=7.6e-25 Score=227.39 Aligned_cols=210 Identities=37% Similarity=0.548 Sum_probs=183.3
Q ss_pred eeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHH
Q 001988 734 IGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLED 811 (985)
Q Consensus 734 ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 811 (985)
||+|++|.||++... +++++++|++...... ..+.+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999976 4899999999866432 34678999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-CCcEEEecccCceeccCCCCcceeccccc
Q 001988 812 CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLSGEDESTMRTQTLA 890 (985)
Q Consensus 812 ~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~g 890 (985)
++......+++..+..++.++++++++| |+.|++|+||+|.||+++. ++.++++|||.+........ ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~ 155 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYL---HSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVG 155 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccC
Confidence 9987644688999999999999999999 7889999999999999999 89999999999987643321 1223457
Q ss_pred ccccccccccccC-ccchhhhcccccccchhhhcccccccCcchhhhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 891 TIGYMAPDEIFVG-ELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAKEQCLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 891 t~~y~aPE~~~~~-~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
...|++||..... ..+.+.|+ |++|++++++ +.+.+++..|+..+|++||++.++++.
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~-~~lg~~~~~l--------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDI-WSLGVILYEL--------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred CCCccChhHhcccCCCCchhhh-HHHHHHHHHH--------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 8899999998777 77888899 8999999988 568999999999999999999999864
No 403
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-27 Score=246.63 Aligned_cols=390 Identities=23% Similarity=0.216 Sum_probs=208.1
Q ss_pred eEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccC-CcCcccCChhhhhcCCCCcEEEecC
Q 001988 222 RISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYN-NSLSGSLPSRIDLALPNLEFLNLGI 300 (985)
Q Consensus 222 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~~l~~L~~L~Ls~ 300 (985)
.++|..|+|+...|.+|+.+++|+.||||+|+|+.+-|.+|.++.+|.+|-+.+ |+|+ .+|...|.+|..|+.|.+.-
T Consensus 71 eirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 71 EIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred EEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcCh
Confidence 344444444433333444444444444444444444444444444444333333 4444 44444444455555555555
Q ss_pred ccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcccCCCCc------c-cccccccccCcccEE
Q 001988 301 NSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPE------L-GFLSSLANCKKLRYL 373 (985)
Q Consensus 301 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~------~-~~~~~l~~l~~L~~L 373 (985)
|++.....+.|..+++|..|.+..|.+..+.-..|..+..++.+.+..|.+...-.- . .....++..+...-.
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~ 229 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPY 229 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchH
Confidence 555544444555555555555555555433333455555555555555442210000 0 000012222233333
Q ss_pred EecCCCCCccCCCCccchhhcccceecccccccccc-CCcCCCCCCccEEEccCCCCCCCCCccccccccccceeccccc
Q 001988 374 GLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNI-PKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNK 452 (985)
Q Consensus 374 ~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 452 (985)
.+.++++..+-+..+.....++..=..+.+...++- ...|..+++|+.|+|++|+|+++.+.+|.++..++.|.|..|+
T Consensus 230 rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~ 309 (498)
T KOG4237|consen 230 RLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNK 309 (498)
T ss_pred HHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcch
Confidence 344444443333333222112211122223232232 2457788888888888888888888888888888888888888
Q ss_pred ccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeee-----cCCCc-----------cCcccee
Q 001988 453 LAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFV-----IPSTF-----------WNLKDIL 516 (985)
Q Consensus 453 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-----~p~~~-----------~~l~~L~ 516 (985)
|...-...|.++..|+.|+|.+|+|+..-|.+|..+.+|..|+|-.|.+.-- ..+|+ ..-..++
T Consensus 310 l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~ 389 (498)
T KOG4237|consen 310 LEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVR 389 (498)
T ss_pred HHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhc
Confidence 8766666777888888888888888877788888888888888877765320 00111 1112344
Q ss_pred EEeecCCcccCC---cccccc---------CCCccc-EEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhc
Q 001988 517 SFDISSNLLDGP---ISLAIG---------NLKAVV-GIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGN 583 (985)
Q Consensus 517 ~L~ls~N~l~~~---~~~~~~---------~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 583 (985)
.++++.+.+... .|+..+ ..+-+. ...-|++.++ .+|..+- ..-.+|++.+|.++ .+|.+ .
T Consensus 390 ~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~ 463 (498)
T KOG4237|consen 390 QIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--L 463 (498)
T ss_pred cccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--H
Confidence 555555444221 111111 011111 1123333333 3333322 23567889999998 56666 5
Q ss_pred ccccCeEecCCCcccCCCCccccccccccccccccc
Q 001988 584 MTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFN 619 (985)
Q Consensus 584 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 619 (985)
+.+| .+|||+|+++..-..+|.+|++|.+|-||+|
T Consensus 464 ~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 464 LRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred Hhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 6778 8999999998777778999999999988887
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.92 E-value=1e-25 Score=213.90 Aligned_cols=199 Identities=23% Similarity=0.314 Sum_probs=162.9
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCC-cchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceEEEEe
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQC-ASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~lv~e 802 (985)
++......||+|+||.|-+-++. +|...|+|.++... .+..++..+|+++..+. .+|.+|++||...+.+..+|.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 44455678999999999988754 89999999997653 34456777888876655 79999999999999999999999
Q ss_pred ccCCCChHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 803 YMSNGSLEDCLH---SSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 803 ~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
.|.- +|..+-+ ..+...++...-+||.-+.+||.||| ....+||||+||+|||++.+|++|+||||.+-.+.+.
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~--~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH--SKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH--HHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9954 7766543 24667899999999999999999998 6788999999999999999999999999998766432
Q ss_pred CCcceecccccccccccccccc----cCccchhhhcccccccchhhhcccccccCc
Q 001988 880 DESTMRTQTLATIGYMAPDEIF----VGELSLKRWVNDLLPVSLVEVVDKSLLSGE 931 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~ 931 (985)
- ..+-..|...|||||.+. ...|+.++|+ |++|+.+.|+...+.++..
T Consensus 203 i---Akt~daGCkpYmaPEri~~e~n~~gY~vksDv-WSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 203 I---AKTMDAGCKPYMAPERINPELNQKGYSVKSDV-WSLGITMIEMAILRFPYES 254 (282)
T ss_pred h---HHHHhcCCCccCChhhcCcccCcccceeehhh-hhhhhhhhhhhhccccccc
Confidence 2 122245888999999764 4579999999 9999999999998876554
No 405
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-26 Score=227.27 Aligned_cols=197 Identities=22% Similarity=0.333 Sum_probs=161.8
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCC-----ceEE
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDD-----FKAL 799 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~-----~~~l 799 (985)
.+..+.||-|+||.||.+.+. +|+.||.|++..- .....+.+.+|++++..++|.|++..++..+-.. +.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344577999999999999864 8999999998643 2234678899999999999999999988776543 4678
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~ 879 (985)
++|.+ ..+|.+.+-. ...++...+.-+.+||++||.|| |+.+|.||||||-|.+++.+...||+|||+|+... .
T Consensus 135 ~TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYL---HsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee-~ 208 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYL---HTANILHRDIKPGNLLVNSNCILKICDFGLARTWD-Q 208 (449)
T ss_pred HHHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHH---hhcchhhccCCCccEEeccCceEEecccccccccc-h
Confidence 88888 4577766654 34678888888999999999999 89999999999999999999999999999999754 3
Q ss_pred CCcceeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCc
Q 001988 880 DESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGE 931 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~ 931 (985)
+.....+..+-|.+|.|||.+++ ..|+...|+ |+.|+.+.|++..++++..
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDi-WSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDI-WSVGCIFAELLQRKILFQA 260 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccce-ehhhHHHHHHHhhhhhhhc
Confidence 33344556678999999999987 458888999 9999999999887775543
No 406
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=9.6e-26 Score=216.98 Aligned_cols=240 Identities=19% Similarity=0.329 Sum_probs=187.7
Q ss_pred HhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCC--ceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDD--FKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~--~~~l 799 (985)
..++|+..+++|+|.|++||.|. ..+.++++||++++- ..+.+.+|+.||+.+. ||||+++++...++. ...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 34678888999999999999998 457889999999743 4577899999999996 999999999997764 5679
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCceeccC
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAKLLSG 878 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla~~~~~ 878 (985)
|+||+.+.+...... .++...+.-++.+++.||.|+ |+.||+|||+||.|+|+|.. -..+|+|+|+|..+..
T Consensus 113 iFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyC---HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYC---HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHH---HhcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 999998877665543 356777888999999999999 89999999999999999865 4799999999998865
Q ss_pred CCCcceeccccccccccccccccc-Cccchhhhcccccccchhhhccccc-ccCcchhhhh-------------------
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSL-LSGEEKHFAA------------------- 937 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~-~~~~~~~~~~------------------- 937 (985)
..+.. -.+.+..|-.||.+.+ ..+...-|+ |++|+++.+|+..+- ++......++
T Consensus 186 ~~eYn---VRVASRyfKGPELLVdy~~YDYSLD~-WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 186 GKEYN---VRVASRYFKGPELLVDYQMYDYSLDM-WSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred Cceee---eeeehhhcCCchheeechhccccHHH-HHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 44433 2457888999998875 556778888 999999888876443 3222211110
Q ss_pred --------H---------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHhHhhh
Q 001988 938 --------K---------------------EQCLLSIFSLALECTMESPEKRIDAKDTITR--LLKIRDTL 977 (985)
Q Consensus 938 --------~---------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~--L~~i~~~~ 977 (985)
. .-..++..+++.+.+.+|..+||||.|.+.. +..++++.
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~ 332 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAE 332 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHh
Confidence 0 0034788999999999999999999998753 34444433
No 407
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=8.7e-27 Score=241.46 Aligned_cols=400 Identities=22% Similarity=0.246 Sum_probs=258.3
Q ss_pred ceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceee-eccccccCCCChhHhhhccccceeccc
Q 001988 100 KSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIR-LSKNKLSGKLPENICNHLRYLKHLFLR 178 (985)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~-ls~n~l~g~lp~~~~~~l~~L~~L~L~ 178 (985)
+.++|..|+|+...|.+|..+++||.||||+|+|+-.-|+.|..+.++..|. +++|+|+ .+|...|+.|.+|+.|.+.
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcC
Confidence 3444445555533333444455555555555555554455555554444333 2335555 7788888888888888888
Q ss_pred CccccccCCcccCCCCCceEEEcccccCCCcccc-ccccccccceEeecccc------------ccCCchhhhcCCCCCC
Q 001988 179 ENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPK-EIGNLTVLQRISLINNK------------LHGEIPQEIGYLQNLD 245 (985)
Q Consensus 179 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~------------l~~~~p~~~~~l~~L~ 245 (985)
-|++.-...+.|..+++|..|.|.+|.+. .+++ .|..+..++.+.++.|. .....|.+++...-..
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 88887666777888888888888888887 4555 77788888888888777 2234455566666666
Q ss_pred EEEecCCcCcccCcccccCC-CCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccC
Q 001988 246 VLQLGFNNLTGVVPATIFNM-STLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGS 324 (985)
Q Consensus 246 ~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 324 (985)
-..+.++++...-+..|..- ..+..-..+.+...+.-|..-|..+++|+.|+|++|+|++.-+.+|..+.+++.|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 66677777776555555432 22322234455555678888889999999999999999999999999999999999999
Q ss_pred cccccccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCcc-CCCCccchhhcccceecccc
Q 001988 325 NSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGF-LPSSIGNLSLSLERLNIAFC 403 (985)
Q Consensus 325 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~~L~~L~L~~n 403 (985)
|++..+....|.++..|+.|+|+.|+|+...+. +|..+..|.+|.|-.|++.-- --.|++.+ |..+
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~-----aF~~~~~l~~l~l~~Np~~CnC~l~wl~~W--------lr~~ 374 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPG-----AFQTLFSLSTLNLLSNPFNCNCRLAWLGEW--------LRKK 374 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecc-----cccccceeeeeehccCcccCccchHHHHHH--------HhhC
Confidence 999988888899999999999999999988765 478888999999999887521 11222222 1122
Q ss_pred ccccccCCcCCCCCCccEEEccCCCCCCC---CCcccc---------cccccc-ceecccccccCCchhhhhhccCCCeE
Q 001988 404 NISGNIPKAIGNLSNLIVLSLGGNNLSGS---IPVTFG---------GLQKLQ-GLDLAFNKLAGSIPDEICLLSRLNEL 470 (985)
Q Consensus 404 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~---------~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 470 (985)
...|..| -+.-..++.+.++++.+... .|+..+ ..+-+. +...|++.++ .+|..+ ...-.+|
T Consensus 375 ~~~~~~~--Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i--P~d~tel 449 (498)
T KOG4237|consen 375 SVVGNPR--CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI--PVDVTEL 449 (498)
T ss_pred CCCCCCC--CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC--CchhHHH
Confidence 2121111 11222344455554443211 111111 112222 2234444444 444322 2345677
Q ss_pred EccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEEeecCC
Q 001988 471 DLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSN 523 (985)
Q Consensus 471 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 523 (985)
++.+|.++ .+|.. .+.+| .+|+++|+++......|.++.+|.+|-+|+|
T Consensus 450 yl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 450 YLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 88888887 44544 55667 7888888888777778888888888888776
No 408
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.92 E-value=2.6e-25 Score=240.26 Aligned_cols=195 Identities=22% Similarity=0.292 Sum_probs=163.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc--------chHHHHHHHHHHHHhcC---CCCeeeEEeeee
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA--------STLKSFEAECEVIKNIR---HRNLVKIISSCS 792 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~---h~niv~l~~~~~ 792 (985)
..+|...+.+|.|+||.|+.|.++ +...|+||.+.+..- +..-.+-.|+.||.+++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 356889999999999999999976 556799998875521 11223567999999997 999999999999
Q ss_pred cCCceEEEEecc-CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEeccc
Q 001988 793 NDDFKALVLEYM-SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFG 871 (985)
Q Consensus 793 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfG 871 (985)
+++++||+||-. +|.+|++++..+. .+++.+..-|+.||+.|+++| |+.||||||||-+||.++.+|-+||+|||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hl---h~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHL---HDQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccc---cccCceecccccccEEEecCCeEEEeecc
Confidence 999999999975 4559999998764 688999999999999999999 99999999999999999999999999999
Q ss_pred CceeccCCCCcceecccccccccccccccccCccchhh-hcccccccchhhhcccccc
Q 001988 872 MAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKR-WVNDLLPVSLVEVVDKSLL 928 (985)
Q Consensus 872 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-dv~~~~g~~~~~i~~~~~~ 928 (985)
.|...+... ...++||..|.|||++.+..|-.+. |+ |++|+.++-++-++-+
T Consensus 716 saa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdi-walgillytivykenp 768 (772)
T KOG1152|consen 716 SAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDI-WALGILLYTIVYKENP 768 (772)
T ss_pred chhhhcCCC----cceeeeeccccchhhhCCCccCCCcchh-hhhhheeeEEEeccCC
Confidence 987654322 2346799999999999988886554 55 9999998888766543
No 409
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.1e-23 Score=269.13 Aligned_cols=314 Identities=22% Similarity=0.278 Sum_probs=161.3
Q ss_pred cccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEe
Q 001988 170 RYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQL 249 (985)
Q Consensus 170 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 249 (985)
.+|+.|++.++.+. .+|..| ...+|++|+|++|++. .+|..+..+++|+.|+|++|...+.+|+ ++.+++|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEe
Confidence 34666666665554 555555 3456666666666665 4555555666666666665543334553 555666666666
Q ss_pred cCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCccccc
Q 001988 250 GFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSG 329 (985)
Q Consensus 250 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 329 (985)
++|.....+|..+.++++|+.|++++|..-+.+|..+ .+++|+.|++++|...+.+|.. ..+|+.|++++|.+.
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~- 738 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE- 738 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-
Confidence 6655444566666666666666666654334555443 4556666666665544344432 234556666666654
Q ss_pred ccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceecccccccccc
Q 001988 330 FIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNI 409 (985)
Q Consensus 330 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~ 409 (985)
.+|..+ .+++|++|++..+........ +.. ++......+++|+.|++++|...+.+
T Consensus 739 ~lP~~~-~l~~L~~L~l~~~~~~~l~~~----------------------~~~-l~~~~~~~~~sL~~L~Ls~n~~l~~l 794 (1153)
T PLN03210 739 EFPSNL-RLENLDELILCEMKSEKLWER----------------------VQP-LTPLMTMLSPSLTRLFLSDIPSLVEL 794 (1153)
T ss_pred cccccc-cccccccccccccchhhcccc----------------------ccc-cchhhhhccccchheeCCCCCCcccc
Confidence 334333 355555555544322111000 000 00001111124555555555544455
Q ss_pred CCcCCCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcC
Q 001988 410 PKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLT 489 (985)
Q Consensus 410 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 489 (985)
|..++++++|+.|+|++|..-+.+|... .+++|+.|++++|..-..+|.. .++|+.|+|++|.|+ .+|..+..++
T Consensus 795 P~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~ 869 (1153)
T PLN03210 795 PSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFS 869 (1153)
T ss_pred ChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCC
Confidence 5555555556666665554333444433 4555666666655433333332 245666666666665 3455566666
Q ss_pred cCceEeecc-ceeeeecCCCccCccceeEEeecCC
Q 001988 490 SLQYLNLGS-NRFTFVIPSTFWNLKDILSFDISSN 523 (985)
Q Consensus 490 ~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N 523 (985)
+|++|+|++ |+++. +|..+..+++|+.++++++
T Consensus 870 ~L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 870 NLSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCCEEECCCCCCcCc-cCcccccccCCCeeecCCC
Confidence 666666665 34443 4444555666666666554
No 410
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.91 E-value=7.7e-25 Score=221.89 Aligned_cols=231 Identities=24% Similarity=0.274 Sum_probs=188.1
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecC------Cc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSND------DF 796 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~------~~ 796 (985)
.+|.....+|.|+- .|..|.+. .+++||+|+.... .....++..+|...+..++|+||++++.++.-. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777788999988 56666543 6899999988644 334457788999999999999999999998543 35
Q ss_pred eEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceec
Q 001988 797 KALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
.|+||||+ .++|...+.. .++..+...+.+|++.|++|| |+.||+||||||+||++..++.+||.|||+|+.-
T Consensus 96 ~y~v~e~m-~~nl~~vi~~---elDH~tis~i~yq~~~~ik~l---hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM---ELDHETISYILYQMLCGIKHL---HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH---hcchHHHHHHHHHHHHHHHHH---HhcceeecccCcccceecchhheeeccchhhccc
Confidence 78999999 5689888873 467788899999999999999 8999999999999999999999999999999863
Q ss_pred cCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhhH------------------
Q 001988 877 SGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAAK------------------ 938 (985)
Q Consensus 877 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~~------------------ 938 (985)
. .....+..+.|..|.|||++.+-.+....|+ |+.||.+.|++.+.+...+....++.
T Consensus 169 ~---~~~~mtpyVvtRyyrapevil~~~~ke~vdi-wSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 169 D---TDFMMTPYVVTRYYRAPEVILGMGYKENVDI-WSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred C---cccccCchhheeeccCchheeccCCcccchh-hhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 2 2245567789999999999999889999999 99999999999988765543211100
Q ss_pred -----------------------------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 939 -----------------------------------EQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 939 -----------------------------------~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
........+++.+|+-.+|++|.+++++++
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 001234677999999999999999999986
No 411
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.7e-23 Score=264.44 Aligned_cols=337 Identities=23% Similarity=0.303 Sum_probs=199.0
Q ss_pred cccCCCCCCEEEccCCc------CcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCc
Q 001988 261 TIFNMSTLKEIFLYNNS------LSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSA 334 (985)
Q Consensus 261 ~l~~l~~L~~L~L~~N~------l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 334 (985)
+|.++.+|+.|.+.++. +...+|..+..-.++|+.|++.+|.+. .+|..+ ...+|+.|++++|++. .+|..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccc
Confidence 34444555555443332 122334433322234555665555554 444444 3455666666666655 34555
Q ss_pred ccCCCCCceEeccCCc-ccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcC
Q 001988 335 IGNLRNLKLFDIFFNN-LTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAI 413 (985)
Q Consensus 335 l~~l~~L~~L~L~~N~-l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~ 413 (985)
+..+++|+.|+|+++. +..++ .+..+++|+.|+|++|.....+|..+..+. +|+.|++++|..-+.+|..+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip-------~ls~l~~Le~L~L~~c~~L~~lp~si~~L~-~L~~L~L~~c~~L~~Lp~~i 701 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIP-------DLSMATNLETLKLSDCSSLVELPSSIQYLN-KLEDLDMSRCENLEILPTGI 701 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCC-------ccccCCcccEEEecCCCCccccchhhhccC-CCCEEeCCCCCCcCccCCcC
Confidence 5566666666666543 22222 144556666666666655556666666665 56666666654444555444
Q ss_pred CCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccc-------cccCCCCc
Q 001988 414 GNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKIS-------GSISSCLG 486 (985)
Q Consensus 414 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-------~~~~~~~~ 486 (985)
++++|+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|++|++.++... ...+..+.
T Consensus 702 -~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 702 -NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred -CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhh
Confidence 5666777777766544444432 345666777777765 445443 4566666666653321 11122223
Q ss_pred CcCcCceEeeccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceee
Q 001988 487 NLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNI 566 (985)
Q Consensus 487 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 566 (985)
..++|+.|+|++|.....+|..+.++++|+.|++++|..-+.+|..+ ++++|+.|++++|..-..+|.. ..+|+.|
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L 851 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDL 851 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEe
Confidence 34567777777776666677777777777777777764333344444 6777888888876554445543 3567888
Q ss_pred eeecceeccchhhhhhcccccCeEecCC-CcccCCCCcccccccccccccccccc
Q 001988 567 SLAYNRLEGPIPESFGNMTSLESLDLSN-NKISGSIPVSFEKLSYLKELNLSFNK 620 (985)
Q Consensus 567 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ls~N~ 620 (985)
+|++|.++ .+|.++..+++|+.|+|++ |++. .+|..+..+++|+.++++++.
T Consensus 852 ~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 852 NLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 88888887 5777888888888888887 4555 567777788888888888774
No 412
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.89 E-value=1.2e-23 Score=224.43 Aligned_cols=235 Identities=23% Similarity=0.319 Sum_probs=192.1
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcC------CCCeeeEEeeeecCCc
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIR------HRNLVKIISSCSNDDF 796 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~------h~niv~l~~~~~~~~~ 796 (985)
-..+|.+....|+|-|++|.+|... -|..||||++.... .-.+.=.+|++||++++ -.++++++..|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 4568988999999999999999854 57899999997552 22344468999999995 3589999999999999
Q ss_pred eEEEEeccCCCChHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCc
Q 001988 797 KALVLEYMSNGSLEDCLHSSNC--ALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMA 873 (985)
Q Consensus 797 ~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla 873 (985)
+|||+|-+ .-+|.+.++.-+. .+....+..++.|+.-||..| -..||+|+||||+|||+.+. ...||||||.|
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL---K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL---KKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH---HhcCeeecccCccceEeccCcceeeeccCccc
Confidence 99999988 4589999987643 477888999999999999999 89999999999999999865 47899999999
Q ss_pred eeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcch--------------------
Q 001988 874 KLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-------------------- 933 (985)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------------- 933 (985)
.....+.-. ...-+..|.|||++.+..|....|+ |+.||.++|+.+|++++....
T Consensus 585 ~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~-WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 585 SFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDT-WSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred ccccccccc----HHHHHHhccCcceeecCcccCCccc-eeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 887543322 2345678999999999999999999 999999999999987654331
Q ss_pred --------hhh-------------------------------------------hHHHHHHHHHHHHHHccCCCCCCCCC
Q 001988 934 --------HFA-------------------------------------------AKEQCLLSIFSLALECTMESPEKRID 962 (985)
Q Consensus 934 --------~~~-------------------------------------------~~~~~~~~l~~l~~~cl~~~P~~RPt 962 (985)
+++ .......++.+++..|+..||++|.+
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 000 01113466888999999999999999
Q ss_pred HHHHHH
Q 001988 963 AKDTIT 968 (985)
Q Consensus 963 ~~ev~~ 968 (985)
.+++++
T Consensus 740 ~nqAL~ 745 (752)
T KOG0670|consen 740 VNQALK 745 (752)
T ss_pred HHHHhc
Confidence 999875
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=4.8e-23 Score=226.32 Aligned_cols=183 Identities=21% Similarity=0.211 Sum_probs=138.7
Q ss_pred HHhcCccCCceeeccCceeEEEEEEc--CCcEEEEEEeccCC-----cchHHHHHHHHHHHHhcCCCCeee-EEeeeecC
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARLE--DGVEIAIKVFHPQC-----ASTLKSFEAECEVIKNIRHRNLVK-IISSCSND 794 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~h~niv~-l~~~~~~~ 794 (985)
...++|...+.||+|+||+||+|+++ +++.||||++.... ......+.+|++++++++|+|++. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 45578999999999999999999864 57778999875331 113456899999999999999985 4432
Q ss_pred CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC-CCCCEEEcCCCcEEEecccCc
Q 001988 795 DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL-KPSNVLLDEDMVAHLSDFGMA 873 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDl-k~~Nill~~~~~~kl~DfGla 873 (985)
+..++||||++|++|... ...+ ...++.++++||+|+ |++||+|||| ||+|||++.++.+||+|||+|
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~~~-------~~~~~~~i~~aL~~l---H~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RPHG-------DPAWFRSAHRALRDL---HRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cccc-------hHHHHHHHHHHHHHH---HHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 457999999999999732 2111 146788999999999 7899999999 999999999999999999999
Q ss_pred eeccCCCCcce------ecccccccccccccccccCcc------chhhhcccccccchh
Q 001988 874 KLLSGEDESTM------RTQTLATIGYMAPDEIFVGEL------SLKRWVNDLLPVSLV 920 (985)
Q Consensus 874 ~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~------~~~~dv~~~~g~~~~ 920 (985)
+.+........ .....+++.|+|||.+...+. +...|-|+.-|...+
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW~~TGDlg~ 218 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIWLATGKKVY 218 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcEEeCCCEEE
Confidence 98764332111 135568899999998754332 234556666665443
No 414
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=6.2e-23 Score=242.76 Aligned_cols=263 Identities=24% Similarity=0.309 Sum_probs=121.9
Q ss_pred CCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEec
Q 001988 267 TLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDI 346 (985)
Q Consensus 267 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 346 (985)
.-..|+|++|.|+ .+|..+. ++|+.|++++|+++. +|.. +++|++|++++|+|+. +|.. .+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~------- 262 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTS-LPVL---PP------- 262 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCc-ccCc---cc-------
Confidence 3456777777776 5666543 356666666666663 3321 2445555555555542 2221 12
Q ss_pred cCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEccC
Q 001988 347 FFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGG 426 (985)
Q Consensus 347 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 426 (985)
+|+.|++++|.+.. +|. ++.+|+.|++++|+++. +|. .+++|++|+|++
T Consensus 263 ----------------------sL~~L~Ls~N~L~~-Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~ 311 (788)
T PRK15387 263 ----------------------GLLELSIFSNPLTH-LPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSD 311 (788)
T ss_pred ----------------------ccceeeccCCchhh-hhh----chhhcCEEECcCCcccc-ccc---cccccceeECCC
Confidence 34444444444431 221 11234445555555442 222 124556666666
Q ss_pred CCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecC
Q 001988 427 NNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIP 506 (985)
Q Consensus 427 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 506 (985)
|+|++. |.. ..+|+.|++++|+|++ +|. ...+|+.|+|++|+|++ +|... .+|+.|++++|+|+. +|
T Consensus 312 N~L~~L-p~l---p~~L~~L~Ls~N~L~~-LP~---lp~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~~-LP 378 (788)
T PRK15387 312 NQLASL-PAL---PSELCKLWAYNNQLTS-LPT---LPSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLTS-LP 378 (788)
T ss_pred CccccC-CCC---cccccccccccCcccc-ccc---cccccceEecCCCccCC-CCCCC---cccceehhhcccccc-Cc
Confidence 666532 221 1245555666666653 332 12356666666666653 33221 345555666666553 23
Q ss_pred CCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccc
Q 001988 507 STFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTS 586 (985)
Q Consensus 507 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 586 (985)
.. ..+|+.|++++|+|+++++ . .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+.++++
T Consensus 379 ~l---~~~L~~LdLs~N~Lt~LP~-l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 379 AL---PSGLKELIVSGNRLTSLPV-L---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred cc---ccccceEEecCCcccCCCC-c---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccC
Confidence 21 1234455555555443221 1 1334445555555542 3322 123444444444444 34444444444
Q ss_pred cCeEecCCCcccCCCCcc
Q 001988 587 LESLDLSNNKISGSIPVS 604 (985)
Q Consensus 587 L~~L~Ls~N~l~~~~p~~ 604 (985)
|+.|+|++|+|++.+|..
T Consensus 447 L~~LdLs~N~Ls~~~~~~ 464 (788)
T PRK15387 447 ETTVNLEGNPLSERTLQA 464 (788)
T ss_pred CCeEECCCCCCCchHHHH
Confidence 444444444444444433
No 415
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=6.6e-23 Score=242.55 Aligned_cols=263 Identities=26% Similarity=0.322 Sum_probs=131.1
Q ss_pred cceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecC
Q 001988 172 LKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGF 251 (985)
Q Consensus 172 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 251 (985)
-..|+|++|.++ .+|+.+. ++|+.|++++|+|+ .+|.. +++|++|++++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 455666666666 5666554 35666666666666 34432 355666666666666 34432 24566666666
Q ss_pred CcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCccccccc
Q 001988 252 NNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFI 331 (985)
Q Consensus 252 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 331 (985)
|.++ .+|.. ..+|+.|++++|+++ .+|. .+++|+.|+|++|+|++ +|.. ..+|+.|++++|++++ +
T Consensus 272 N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~----~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 272 NPLT-HLPAL---PSGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred Cchh-hhhhc---hhhcCEEECcCCccc-cccc----cccccceeECCCCcccc-CCCC---cccccccccccCcccc-c
Confidence 6665 23332 234556666666665 4443 13456666666666653 2321 1234455555555543 2
Q ss_pred CCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCC
Q 001988 332 PSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPK 411 (985)
Q Consensus 332 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~ 411 (985)
|.. ..+|+.|+|++|+|+.++.. ..+|+.|++++|+ |+. +|.
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~LP~l---------p~~L~~L~Ls~N~-------------------------L~~-LP~ 379 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLASLPTL---------PSELYKLWAYNNR-------------------------LTS-LPA 379 (788)
T ss_pred ccc---ccccceEecCCCccCCCCCC---------Ccccceehhhccc-------------------------ccc-Ccc
Confidence 321 12445555555555443321 1234444444444 442 222
Q ss_pred cCCCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcC
Q 001988 412 AIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSL 491 (985)
Q Consensus 412 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 491 (985)
. .++|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..+.++++|
T Consensus 380 l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L 447 (788)
T PRK15387 380 L---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSE 447 (788)
T ss_pred c---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCC
Confidence 1 1345555555555553 2221 1345555555555553 3332 234455555555555 345555555556
Q ss_pred ceEeeccceeeeecCCCc
Q 001988 492 QYLNLGSNRFTFVIPSTF 509 (985)
Q Consensus 492 ~~L~L~~N~l~~~~p~~~ 509 (985)
+.|+|++|+|++..+..+
T Consensus 448 ~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 448 TTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CeEECCCCCCCchHHHHH
Confidence 666666666555444433
No 416
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=8.6e-23 Score=217.33 Aligned_cols=131 Identities=25% Similarity=0.426 Sum_probs=112.0
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcC-----C---CCeeeEEeeeecC-
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-----H---RNLVKIISSCSND- 794 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----h---~niv~l~~~~~~~- 794 (985)
..+|.+.++||-|-|++||+|.+. +.+.||+|+.+.. ..-.+....||++|++++ | ..||++++.|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 378889999999999999999864 6788999998754 233456789999999993 3 4699999999653
Q ss_pred ---CceEEEEeccCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 001988 795 ---DFKALVLEYMSNGSLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLL 859 (985)
Q Consensus 795 ---~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill 859 (985)
.+++||+|++ |..|..++... .+.++...+.+|++||+.||.||| .+.||||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH--~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLH--RECGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHH--HhcCccccCCCcceeee
Confidence 4899999999 77999998765 446889999999999999999998 67899999999999999
No 417
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.89 E-value=8.5e-23 Score=243.59 Aligned_cols=341 Identities=19% Similarity=0.324 Sum_probs=165.7
Q ss_pred HHHhccCChhHHHHHHHHHHhcccCCCC-cccCCCCCCCCcceeee----------------EEEeCCCCeEEEEEecCC
Q 001988 21 ITVAASNISTDQQALLALKDHITYDPTN-LLGTNWTSNASICSWIG----------------IICDVNSHKVTTLNLSSF 83 (985)
Q Consensus 21 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~-~~~s~w~~~~~~c~w~g----------------v~c~~~~~~v~~l~L~~~ 83 (985)
|+..+...+.|.+.+++..+.+.+.+.- ...+.|++++++|-=.+ |.|. ...||.+..-+.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~--~~~vt~l~~~g~ 131 (754)
T PRK15370 54 CHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGG--GKSVTYTRVTES 131 (754)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecC--CCcccccccccc
Confidence 4555666688999999999999655431 12335998899996544 5564 345666665543
Q ss_pred cccccCchhcccccccceeccc-----CCcCCCCCC---ccc-----ccCCCCcEEEccCcccCCCCccccccCCcccee
Q 001988 84 NLQGTIPPEIANLSSLKSLDLS-----HNKLSSNIP---SSI-----FTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDI 150 (985)
Q Consensus 84 ~l~g~~~~~l~~l~~L~~L~L~-----~n~l~~~~p---~~~-----~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L 150 (985)
-....-..+ -.. ..-+.. .+.-.+.-+ ..+ +-..+.+.|+++++.++. +|..+ ..+|+.|
T Consensus 132 ~~~~~~~~~---~~~-~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~I--p~~L~~L 204 (754)
T PRK15370 132 EQASSASGS---KDA-VNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACI--PEQITTL 204 (754)
T ss_pred cccccCCCC---CCh-hhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCccc--ccCCcEE
Confidence 222111000 000 000000 010000000 001 111345667777666663 22222 1244555
Q ss_pred eeccccccCCCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccc
Q 001988 151 RLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKL 230 (985)
Q Consensus 151 ~ls~n~l~g~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 230 (985)
+|++|+++ .+|..++ ++|++|++++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|++++|+|
T Consensus 205 ~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L 274 (754)
T PRK15370 205 ILDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKI 274 (754)
T ss_pred EecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCcc
Confidence 55555555 4554442 34555555555555 3444332 24555555555555 3444432 2455555555555
Q ss_pred cCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCcc
Q 001988 231 HGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSS 310 (985)
Q Consensus 231 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 310 (985)
+ .+|+.+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+++. +|..
T Consensus 275 ~-~LP~~l~--~sL~~L~Ls~N~Lt-------------------------~LP~~lp---~sL~~L~Ls~N~Lt~-LP~~ 322 (754)
T PRK15370 275 S-CLPENLP--EELRYLSVYDNSIR-------------------------TLPAHLP---SGITHLNVQSNSLTA-LPET 322 (754)
T ss_pred C-ccccccC--CCCcEEECCCCccc-------------------------cCcccch---hhHHHHHhcCCcccc-CCcc
Confidence 4 3444332 24555555555444 2332221 234444555554442 2322
Q ss_pred ccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccc
Q 001988 311 ITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGN 390 (985)
Q Consensus 311 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 390 (985)
+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++.++... .++|++|++++|+++. +|..+.
T Consensus 323 l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~l--------p~~L~~LdLs~N~Lt~-LP~~l~- 387 (754)
T PRK15370 323 LP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPETL--------PPTITTLDVSRNALTN-LPENLP- 387 (754)
T ss_pred cc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChhh--------cCCcCEEECCCCcCCC-CCHhHH-
Confidence 21 345555555555553 333332 45666666666666543321 1467777777777763 444332
Q ss_pred hhhcccceeccccccccccCCcC----CCCCCccEEEccCCCCC
Q 001988 391 LSLSLERLNIAFCNISGNIPKAI----GNLSNLIVLSLGGNNLS 430 (985)
Q Consensus 391 l~~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~L~~N~l~ 430 (985)
.+|+.|++++|+++ .+|..+ ..++++..|++.+|.++
T Consensus 388 --~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 --AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred --HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 25666777777666 334322 33455666666666655
No 418
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=8.2e-23 Score=201.86 Aligned_cols=234 Identities=17% Similarity=0.204 Sum_probs=179.7
Q ss_pred hcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEe-eeecCCceEEEE
Q 001988 725 TDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIIS-SCSNDDFKALVL 801 (985)
Q Consensus 725 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~-~~~~~~~~~lv~ 801 (985)
.+.|.+.+.+|+|.||.+-+++++ +.+.+|+|.++.. ....++|.+|...--.+ .|.||+.-|+ .|+..+..+++|
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 466888899999999999999976 6678999998755 44568899998876556 4899998776 467788888999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc--CCCcEEEecccCceeccCC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD--EDMVAHLSDFGMAKLLSGE 879 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~--~~~~~kl~DfGla~~~~~~ 879 (985)
||+|.|+|.+-+...+ +-+....+++.|+++|+.|| |++++||||||.+|||+- +..++||||||..+..+..
T Consensus 102 E~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fM---HsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFM---HSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred ccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHh---hccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999999888754 66778889999999999999 899999999999999993 4458999999998764211
Q ss_pred CCcceecccccccccccccccccC-----ccchhhhcccccccchhhhcccccccCcch----hhhhHH-----------
Q 001988 880 DESTMRTQTLATIGYMAPDEIFVG-----ELSLKRWVNDLLPVSLVEVVDKSLLSGEEK----HFAAKE----------- 939 (985)
Q Consensus 880 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~----~~~~~~----------- 939 (985)
. ...-.+-.|.|||..... ...+..|+ |.||++++.+++|.++..... .+...+
T Consensus 177 V-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~-WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P 250 (378)
T KOG1345|consen 177 V-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDI-WQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP 250 (378)
T ss_pred e-----hhhhhhcccCCcHHHhhccccceEecccccc-hheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc
Confidence 1 122356679999965422 24567788 999999999999988765321 111111
Q ss_pred ----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 940 ----QCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 940 ----~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
...+...++.++-+.++|++|--..++.+..
T Consensus 251 ~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 251 KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 1346677788899999999995554444443
No 419
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.88 E-value=3.4e-22 Score=210.19 Aligned_cols=198 Identities=30% Similarity=0.386 Sum_probs=170.2
Q ss_pred ccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcc-hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccC
Q 001988 728 FAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCAS-TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMS 805 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 805 (985)
|...+.||+|++|.||+|... +++++|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 456788999999999999976 4889999999876554 56788999999999999999999999999899999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCccee
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMR 885 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 885 (985)
+++|.+++......+++.....++.+++.++.+| |+.+++|+|++|+||+++.++.++|+|||.+..+..... ...
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYL---HSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALL 156 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-ccc
Confidence 9999999987643378999999999999999999 788999999999999999999999999999988754321 122
Q ss_pred ccccccccccccccc-ccCccchhhhcccccccchhhhcccccccC
Q 001988 886 TQTLATIGYMAPDEI-FVGELSLKRWVNDLLPVSLVEVVDKSLLSG 930 (985)
Q Consensus 886 ~~~~gt~~y~aPE~~-~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~ 930 (985)
....++..|++||.. ....++.++|+ |++|+.++++++++.+..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv-~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDI-WSLGVILYELLWGPEPFS 201 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhH-HHHHHHHHHHHHCCCCcc
Confidence 334578889999988 66777788999 999999999999876653
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=3.9e-21 Score=195.38 Aligned_cols=247 Identities=20% Similarity=0.203 Sum_probs=204.6
Q ss_pred HhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~ 801 (985)
..-.|+++++||+|.||+.+.|. .-++++||||.-..+ .+..+++.|.+.++.+. .++|.++|.+..++-+-.+|+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 34578999999999999999997 457999999976544 34578899999999985 699999999999988889999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-----cEEEecccCceec
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-----VAHLSDFGMAKLL 876 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-----~~kl~DfGla~~~ 876 (985)
|++ |.+|+|.+.-.+..++..++..+|.|+..-++|+ |++..|+|||||+|+||...+ .+.++|||+|+.+
T Consensus 104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~v---H~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYV---HEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHH---HhcceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 999 8899999988888999999999999999999999 899999999999999997544 6899999999998
Q ss_pred cCCCCc-----ceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhh----------------
Q 001988 877 SGEDES-----TMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF---------------- 935 (985)
Q Consensus 877 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~---------------- 935 (985)
.++.+. .......||.+||+-...++.+.+.+.|. -++|-+++-.+.|.+++......
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDL-EaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDL-EALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhH-HHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 765543 23455679999999999999999999888 88888888888888766443211
Q ss_pred ---hhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhhh
Q 001988 936 ---AAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDTL 977 (985)
Q Consensus 936 ---~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~~ 977 (985)
...+..++++..-++-.-+.+-.+-|...=+...+..+.++.
T Consensus 259 ~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 259 PIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred CHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 122335778888777777788888899888877777776653
No 421
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.86 E-value=6.7e-22 Score=208.55 Aligned_cols=193 Identities=26% Similarity=0.363 Sum_probs=157.0
Q ss_pred HhcCccCCceeeccCceeEEEEEEc----CCcEEEEEEeccCCcchHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE----DGVEIAIKVFHPQCASTLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 798 (985)
....|...++||.|.|++||+|... ..+.||+|.+..... ...+.+|++.|..+ .+.||+++.+++..++...
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 3456888999999999999999743 467899999876543 46789999999999 5999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-CCcEEEecccCceecc
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHLSDFGMAKLLS 877 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-~~~~kl~DfGla~~~~ 877 (985)
+|+||++..+..++... ++......+++.+..||+++ |..|||||||||.|++.+. .++-.|+|||+|..+.
T Consensus 112 ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~---h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHL---HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred EEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhh---hccCccccCCCccccccccccCCceEEechhHHHHH
Confidence 99999999888888774 45788888999999999999 8999999999999999974 5678999999997321
Q ss_pred CCC------------------------------------------Ccceeccccccccccccccccc-Cccchhhhcccc
Q 001988 878 GED------------------------------------------ESTMRTQTLATIGYMAPDEIFV-GELSLKRWVNDL 914 (985)
Q Consensus 878 ~~~------------------------------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~ 914 (985)
... ........+||++|.|||+++. +..+.+.|+ |+
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi-ws 263 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI-WS 263 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce-ee
Confidence 100 0001123469999999999875 567889999 88
Q ss_pred cccchhhhcccc
Q 001988 915 LPVSLVEVVDKS 926 (985)
Q Consensus 915 ~g~~~~~i~~~~ 926 (985)
.|+.++.+++..
T Consensus 264 ~GVI~Lslls~~ 275 (418)
T KOG1167|consen 264 AGVILLSLLSRR 275 (418)
T ss_pred ccceeehhhccc
Confidence 888877666543
No 422
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=5.1e-21 Score=186.16 Aligned_cols=245 Identities=20% Similarity=0.196 Sum_probs=197.8
Q ss_pred HhcCccCCceeeccCceeEEEEE-EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCC-CCeeeEEeeeecCCceEEEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRAR-LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRH-RNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h-~niv~l~~~~~~~~~~~lv~ 801 (985)
....|...++||+|+||.+|.|. ..+|.+||||.-..... ..++..|.++.+.+++ ..|.++..+..+.++-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34689999999999999999997 56899999998765432 2567789999999976 78888888999999999999
Q ss_pred eccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC---CCcEEEecccCceeccC
Q 001988 802 EYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 802 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~---~~~~kl~DfGla~~~~~ 878 (985)
|.. |.+|++.+.-....++..+++-.|-|++.-++|+ |.+++|||||||+|+|..- ...+.++|||+|+.+.+
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyv---H~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYV---HLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHH---HhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999 8899999887777899999999999999999999 8999999999999999964 34689999999999876
Q ss_pred CCCcc-----eecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh----------------
Q 001988 879 EDEST-----MRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA---------------- 937 (985)
Q Consensus 879 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~---------------- 937 (985)
..+.. ......||.+|.+-....+.+.+.+.|+ -++|+++.-.-.|.+++........
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDm-eSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDM-ESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhh-hhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 44322 2344569999999988888888888888 8888888888777776654321111
Q ss_pred ---HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHh
Q 001988 938 ---KEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRD 975 (985)
Q Consensus 938 ---~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~ 975 (985)
.+..|.++.-.+.-|-..--++-|+..=+.+.+.-+..
T Consensus 246 e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 246 EVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 11246778888888988888888988777666655443
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.4e-21 Score=233.17 Aligned_cols=260 Identities=24% Similarity=0.385 Sum_probs=154.7
Q ss_pred eeeeEEEeCCCCeEEEEEecCCcccccCchhcccccccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCcccc
Q 001988 62 SWIGIICDVNSHKVTTLNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFT 141 (985)
Q Consensus 62 ~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 141 (985)
-|.-..|-. ..++.|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|+|++|+|+. +|..+
T Consensus 169 ~~r~~~Cl~--~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~l 239 (754)
T PRK15370 169 VQRMRDCLK--NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPATL 239 (754)
T ss_pred HHHHHhhcc--cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChhh
Confidence 344445643 34688999999888 5777664 57899999999998 5777664 589999999998874 33322
Q ss_pred ccCCccceeeeccccccCCCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccc
Q 001988 142 FNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQ 221 (985)
Q Consensus 142 ~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 221 (985)
..+|+.|+|++|.+. .+|..+. ++|+.|++++|+++ .+|+.+. ++|+.|+|++|+|+ .+|..+. ++|+
T Consensus 240 --~~~L~~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~ 307 (754)
T PRK15370 240 --PDTIQEMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGIT 307 (754)
T ss_pred --hccccEEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHH
Confidence 235677777777776 6666553 45677777777776 4666554 36677777777766 3454433 3566
Q ss_pred eEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCc
Q 001988 222 RISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGIN 301 (985)
Q Consensus 222 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N 301 (985)
.|++++|+++ .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+++ .+|..+ .++|+.|+|++|
T Consensus 308 ~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l---p~~L~~LdLs~N 377 (754)
T PRK15370 308 HLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL---PPTITTLDVSRN 377 (754)
T ss_pred HHHhcCCccc-cCCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh---cCCcCEEECCCC
Confidence 6666666666 3444332 456666666666653 444432 45555666655555 344432 134555555555
Q ss_pred cCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCC
Q 001988 302 SFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLD 381 (985)
Q Consensus 302 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 381 (985)
+++ .+|. .+. ..|+.|++++|+++.++..+ ...+..++.+..|++.+|+++
T Consensus 378 ~Lt-~LP~------------------------~l~--~sL~~LdLs~N~L~~LP~sl--~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 378 ALT-NLPE------------------------NLP--AALQIMQASRNNLVRLPESL--PHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred cCC-CCCH------------------------hHH--HHHHHHhhccCCcccCchhH--HHHhhcCCCccEEEeeCCCcc
Confidence 544 2232 222 23555555555555443321 112234466777777777765
No 424
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=5.4e-21 Score=193.59 Aligned_cols=140 Identities=19% Similarity=0.204 Sum_probs=110.0
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcc--h-------H-----------------HHHHHHHHHHHhcCCCCe
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS--T-------L-----------------KSFEAECEVIKNIRHRNL 784 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~--~-------~-----------------~~~~~E~~il~~l~h~ni 784 (985)
.+.||+|+||.||+|...+|++||||+++..... . . .....|+++++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999889999999999754221 1 0 122459999999988776
Q ss_pred eeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc
Q 001988 785 VKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 864 (985)
Q Consensus 785 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~ 864 (985)
.....+... ..+|||||++|+++....... ..++.....+++.|++.+|+|+| |+.||+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~--H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILY--QDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHH--HhCCcccCCCCHHHEEEE-CCc
Confidence 443333222 237999999988776543322 36788999999999999999997 788999999999999998 478
Q ss_pred EEEecccCceec
Q 001988 865 AHLSDFGMAKLL 876 (985)
Q Consensus 865 ~kl~DfGla~~~ 876 (985)
++|+|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999998754
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=3.7e-20 Score=205.06 Aligned_cols=245 Identities=23% Similarity=0.259 Sum_probs=194.1
Q ss_pred CccCCceeeccCceeEEEEEEcCC--cEEEEEEeccCCcchHHHHHHHHHHHHhcCC----CCeeeEEeee-ecCCceEE
Q 001988 727 NFAENNIIGIGGFGSVYRARLEDG--VEIAIKVFHPQCASTLKSFEAECEVIKNIRH----RNLVKIISSC-SNDDFKAL 799 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~~~--~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h----~niv~l~~~~-~~~~~~~l 799 (985)
+|.+.+.||+|+||.||.|...+. ..+|+|............+..|+.++..+.. +++.++++.. ......+|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997643 5789998765533333378889999998873 6899999998 57788899
Q ss_pred EEeccCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-----CcEEEecccCc
Q 001988 800 VLEYMSNGSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-----MVAHLSDFGMA 873 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-----~~~kl~DfGla 873 (985)
||+.+ |.+|.+...... ..++..+..+++.|++.+|+++ |+.|++||||||+|++++.. ..+++.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~l---H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDL---HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHH---HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99998 889999876554 6899999999999999999999 89999999999999999865 46999999999
Q ss_pred e--eccCCCCc----ce--ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhhh--------
Q 001988 874 K--LLSGEDES----TM--RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFAA-------- 937 (985)
Q Consensus 874 ~--~~~~~~~~----~~--~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~~-------- 937 (985)
+ .+...... .. .....||.+|+++....+.+.+.+.|+ |++.+++.++..+.+++........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDl-es~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDL-ESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhh-hhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 9 43322211 11 223459999999999999999999898 8888899999988766533211100
Q ss_pred --------HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 938 --------KEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 938 --------~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
....+.++.+++..+-+.+..++|....+...+++...+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 011346677788888888999999999999998776654
No 426
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.84 E-value=1.6e-21 Score=242.44 Aligned_cols=186 Identities=17% Similarity=0.143 Sum_probs=136.6
Q ss_pred hcCC-CCeeeEEeeee-------cCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 001988 778 NIRH-RNLVKIISSCS-------NDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIH 849 (985)
Q Consensus 778 ~l~h-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH 849 (985)
.++| +||++++++|. ..+.++.+|||+ +++|.+++......+++.+++.++.||++||+|| |++||+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAA---HSQGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHH---HhCCeee
Confidence 3455 57778888772 234567788987 6699999987666789999999999999999999 8999999
Q ss_pred CCCCCCCEEEcCC-------------------CcEEEecccCceeccCCCC--------------cceeccccccccccc
Q 001988 850 CDLKPSNVLLDED-------------------MVAHLSDFGMAKLLSGEDE--------------STMRTQTLATIGYMA 896 (985)
Q Consensus 850 rDlk~~Nill~~~-------------------~~~kl~DfGla~~~~~~~~--------------~~~~~~~~gt~~y~a 896 (985)
|||||+|||++.. +.+|++|||+++....... .......+||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 9999999999654 4556666666654211000 000112358999999
Q ss_pred ccccccCccchhhhcccccccchhhhcccccccCcchhh----------hhHHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 001988 897 PDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHF----------AAKEQCLLSIFSLALECTMESPEKRIDAKDT 966 (985)
Q Consensus 897 PE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~----------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev 966 (985)
||++.+..++.++|+ |++|++++|++++.......... +.......+...++.+||.++|.+||+|.|+
T Consensus 184 PE~~~~~~~~~~sDV-wSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~ei 262 (793)
T PLN00181 184 PEEDNGSSSNCASDV-YRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSEL 262 (793)
T ss_pred hhhhccCCCCchhhh-hhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHH
Confidence 999999999999999 99999999999865433221000 0001123446678899999999999999999
Q ss_pred HH
Q 001988 967 IT 968 (985)
Q Consensus 967 ~~ 968 (985)
++
T Consensus 263 l~ 264 (793)
T PLN00181 263 LQ 264 (793)
T ss_pred hh
Confidence 75
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=3.5e-21 Score=189.93 Aligned_cols=234 Identities=20% Similarity=0.267 Sum_probs=185.5
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccC--CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCC
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQ--CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGS 808 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 808 (985)
..+|.....|+.|+|++. |..+++|++..+ .....+.|..|.-.++-+.||||..++|.|..+-+..++..|||.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 346788899999999996 666777887654 22334678899999999999999999999999999999999999999
Q ss_pred hHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecc
Q 001988 809 LEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQ 887 (985)
Q Consensus 809 L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 887 (985)
|...+++. ....+..+..+++.++|+|++|||.. ++-|.---+.+..|++|++.+++|+- +-++ .......
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~k------fsfqe~g 345 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTK------FSFQEVG 345 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccce------eeeeccc
Confidence 99999987 33567788899999999999999642 23344556889999999999888761 1111 1122233
Q ss_pred cccccccccccccccCccc---hhhhcccccccchhhhcccccccCcchhh-------------hhHHHHHHHHHHHHHH
Q 001988 888 TLATIGYMAPDEIFVGELS---LKRWVNDLLPVSLVEVVDKSLLSGEEKHF-------------AAKEQCLLSIFSLALE 951 (985)
Q Consensus 888 ~~gt~~y~aPE~~~~~~~~---~~~dv~~~~g~~~~~i~~~~~~~~~~~~~-------------~~~~~~~~~l~~l~~~ 951 (985)
....|.||+||.++..+.. ...|+ |+|.+.+||+.+.++++.+.+.. ..+.+....+.++|.-
T Consensus 346 r~y~pawmspealqrkped~n~raadm-wsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~i 424 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADM-WSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNI 424 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhH-HHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHH
Confidence 4578899999999876643 45677 99999999999999887765432 2344566788999999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhH
Q 001988 952 CTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 952 cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
|...||.+||.+..++-.|+++.
T Consensus 425 cmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 425 CMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999998864
No 428
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=3.1e-19 Score=181.71 Aligned_cols=140 Identities=22% Similarity=0.263 Sum_probs=110.9
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcch--------------------------HHHHHHHHHHHHhcCCCCe
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST--------------------------LKSFEAECEVIKNIRHRNL 784 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~--------------------------~~~~~~E~~il~~l~h~ni 784 (985)
.+.||+|+||.||+|...+|+.||||+++...... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999998789999999988652110 1123678999999999987
Q ss_pred eeEEeeeecCCceEEEEeccCCCChHHH-hhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC
Q 001988 785 VKIISSCSNDDFKALVLEYMSNGSLEDC-LHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863 (985)
Q Consensus 785 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~ 863 (985)
.....+... ..++||||++|+++... +.. ..++.....+++.|++.++.++| +..||+||||||+||+++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH--~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY--QEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH--HhCCEecCCCChhhEEEE-CC
Confidence 554444333 24899999998865443 332 35677888999999999999994 339999999999999999 89
Q ss_pred cEEEecccCceecc
Q 001988 864 VAHLSDFGMAKLLS 877 (985)
Q Consensus 864 ~~kl~DfGla~~~~ 877 (985)
.++|+|||+|+...
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999998764
No 429
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=4.1e-19 Score=176.67 Aligned_cols=187 Identities=17% Similarity=0.130 Sum_probs=142.3
Q ss_pred cCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcc----hHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEEec
Q 001988 729 AENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS----TLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 729 ~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~----~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
.+...+++|+||+||.+.. ++.+++.+.+...... ....+++|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999998777 6788887777644221 1225789999999995 5889999886 346899999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC-CCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDL-KPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDl-k~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
++|.+|.+..... ...++.|++++++++ |++||+|||| ||+||+++.++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~~--------~~~~~~qi~~~L~~l---H~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPRG--------DLAYFRAARRLLQQL---HRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhhh--------hHHHHHHHHHHHHHH---HHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 9999987643211 134778999999999 8999999999 799999999999999999999865433210
Q ss_pred ----c-------eeccccccccccccccccc-CccchhhhcccccccchhhhcccccccCc
Q 001988 883 ----T-------MRTQTLATIGYMAPDEIFV-GELSLKRWVNDLLPVSLVEVVDKSLLSGE 931 (985)
Q Consensus 883 ----~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~~~~g~~~~~i~~~~~~~~~ 931 (985)
. .+.-..+++.|++|+.... ...++..-+|++.|..++.++++.++.-.
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0111236888999986543 35566777889999999999999887544
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=4.4e-19 Score=180.91 Aligned_cols=169 Identities=15% Similarity=0.148 Sum_probs=131.2
Q ss_pred HhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHH---------HHHHHHHHHhcCCCCeeeEEeeeecC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKS---------FEAECEVIKNIRHRNLVKIISSCSND 794 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~---------~~~E~~il~~l~h~niv~l~~~~~~~ 794 (985)
-..+|+..+++|.|+||.||++.. ++..+|+|.+++........ +++|+..+.+++||+|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999766 57789999998664433222 68999999999999999998886533
Q ss_pred --------CceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEE
Q 001988 795 --------DFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 866 (985)
Q Consensus 795 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~k 866 (985)
+..++||||++|.+|.++.. .+. ....+++.++..+ |+.|++|||+||+||+++++| ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~l---H~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESL---HQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHH---HHcCCccCCCChHHEEEeCCC-EE
Confidence 35789999999999988732 222 2456899999999 899999999999999999998 99
Q ss_pred EecccCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhh
Q 001988 867 LSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVE 921 (985)
Q Consensus 867 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~ 921 (985)
++|||..+........ ...++...+..+.|+ |++|+.+.-
T Consensus 175 liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di-~~lg~~~~~ 214 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEI-KDLGYYLLI 214 (232)
T ss_pred EEECCCcccccchhhH--------------HHHHHHhHhcccccc-cceeEeehH
Confidence 9999987654211111 013445556678888 888877554
No 431
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=2e-20 Score=208.38 Aligned_cols=277 Identities=24% Similarity=0.291 Sum_probs=136.5
Q ss_pred EEEecCCccc-ccCchhcccccccceecccCCcCCCC----CCcccccCCCCcEEEccCcccCC------CCccccccCC
Q 001988 77 TLNLSSFNLQ-GTIPPEIANLSSLKSLDLSHNKLSSN----IPSSIFTMSTLKVLYLMDNQLSG------SLSSFTFNTS 145 (985)
Q Consensus 77 ~l~L~~~~l~-g~~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~------~~~~~~~~~~ 145 (985)
.|+|..+.++ +.....+..++.|+.|+++++.++.. ++..+...+.|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666666 34455566667777888877777532 45555666677777777776652 1222333444
Q ss_pred ccceeeeccccccCCCChhHhhhccc---cceecccCccccc----cCCcccCCC-CCceEEEcccccCCCc----cccc
Q 001988 146 SILDIRLSKNKLSGKLPENICNHLRY---LKHLFLRENMFYG----KIPSSLSKC-KQLQELHLGYNNLSGA----IPKE 213 (985)
Q Consensus 146 ~L~~L~ls~n~l~g~lp~~~~~~l~~---L~~L~L~~n~l~~----~~p~~l~~l-~~L~~L~L~~N~l~~~----~p~~ 213 (985)
+|+.|++++|.+.+..+..+ ..+.+ |++|++++|.+++ .+...+..+ ++|++|+|++|.+++. ++..
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~-~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVL-ESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred ceeEEEccCCCCChhHHHHH-HHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 55555555555544333322 22332 5555555555442 122333344 4555555555555522 1222
Q ss_pred cccccccceEeeccccccCC----chhhhcCCCCCCEEEecCCcCccc----CcccccCCCCCCEEEccCCcCcccCChh
Q 001988 214 IGNLTVLQRISLINNKLHGE----IPQEIGYLQNLDVLQLGFNNLTGV----VPATIFNMSTLKEIFLYNNSLSGSLPSR 285 (985)
Q Consensus 214 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 285 (985)
+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~-------------------- 220 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL-------------------- 220 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc--------------------
Confidence 33334455555555544421 222233334455555555544321 12223333
Q ss_pred hhhcCCCCcEEEecCccCCCcCCcccc-----CCCCccEEEccCccccc----ccCCcccCCCCCceEeccCCcccCCCC
Q 001988 286 IDLALPNLEFLNLGINSFSGTIPSSIT-----NASKLILLEMGSNSFSG----FIPSAIGNLRNLKLFDIFFNNLTSSTP 356 (985)
Q Consensus 286 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~ 356 (985)
++|++|++++|.+++.....+. ...+|+.|++++|.++. .+...+..+++|+++++++|.++..+.
T Consensus 221 -----~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~ 295 (319)
T cd00116 221 -----KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGA 295 (319)
T ss_pred -----CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHH
Confidence 4455555555554432222111 12455666666665541 223344555667777777777765432
Q ss_pred ccccccccccc-CcccEEEecCCCC
Q 001988 357 ELGFLSSLANC-KKLRYLGLGGNPL 380 (985)
Q Consensus 357 ~~~~~~~l~~l-~~L~~L~L~~N~l 380 (985)
.. +...+... +.|++|++.+|++
T Consensus 296 ~~-~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 296 QL-LAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HH-HHHHHhhcCCchhhcccCCCCC
Confidence 11 11223333 5777888777753
No 432
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.78 E-value=6.2e-19 Score=177.87 Aligned_cols=151 Identities=24% Similarity=0.229 Sum_probs=124.9
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|+|.++++..+..+++.++..++.|++.||+|| |+.+ ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALREL---HRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH---HhcC------CcccEeEcCccceee--ccceEeecccc------
Confidence 689999987666799999999999999999999 5665 999999999999999 99998764221
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcchhhh-------------------hHHHHHH--HH
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKHFA-------------------AKEQCLL--SI 945 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~-------------------~~~~~~~--~l 945 (985)
..||+.|||||++.+..++.++|+ |++|++++++++++.+........ ......+ ++
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~Di-wSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADI-YSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSF 141 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhH-HHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhH
Confidence 258999999999999999999999 999999999999887654321100 1122223 68
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 946 FSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 946 ~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
.+++.+||..+|.+||++.|+++.+..+...
T Consensus 142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 142 ADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877644
No 433
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=4e-18 Score=173.86 Aligned_cols=137 Identities=16% Similarity=0.252 Sum_probs=107.6
Q ss_pred ccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhc-----CCCCeeeEEeeeecCC---ceE-
Q 001988 728 FAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNI-----RHRNLVKIISSCSNDD---FKA- 798 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-----~h~niv~l~~~~~~~~---~~~- 798 (985)
+...+.||+|+||.||. .-.++.. +||++........+.+.+|+++++++ .||||++++|+++++. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34567899999999996 3334444 79998766455567899999999999 5799999999998863 433
Q ss_pred EEEec--cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEeCCCCCCCEEEcCC----CcEEEeccc
Q 001988 799 LVLEY--MSNGSLEDCLHSSNCALNIFCRLNIMIDIASAL-EYLHFGHSTPIIHCDLKPSNVLLDED----MVAHLSDFG 871 (985)
Q Consensus 799 lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L-~~Lh~~h~~~ivHrDlk~~Nill~~~----~~~kl~DfG 871 (985)
+|||| +++|+|.+++... .+++. ..++.+++.++ +|| |+++|+||||||+||+++.. +.++|+||+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yL---h~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYL---LDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 78999 5679999999764 34444 35677888777 999 89999999999999999743 379999954
Q ss_pred Cc
Q 001988 872 MA 873 (985)
Q Consensus 872 la 873 (985)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 434
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=4e-20 Score=205.96 Aligned_cols=285 Identities=21% Similarity=0.276 Sum_probs=145.4
Q ss_pred eeeccccccCCCChhHhhhccccceecccCcccccc----CCcccCCCCCceEEEcccccCCC------ccccccccccc
Q 001988 150 IRLSKNKLSGKLPENICNHLRYLKHLFLRENMFYGK----IPSSLSKCKQLQELHLGYNNLSG------AIPKEIGNLTV 219 (985)
Q Consensus 150 L~ls~n~l~g~lp~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~ 219 (985)
|+|+.+.+++.--..++..+.+|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 445555555443344556667777777777776432 55566677777888887777662 23334555666
Q ss_pred cceEeeccccccCCchhhhcCCCC---CCEEEecCCcCcc----cCcccccCC-CCCCEEEccCCcCcccCChhhhhcCC
Q 001988 220 LQRISLINNKLHGEIPQEIGYLQN---LDVLQLGFNNLTG----VVPATIFNM-STLKEIFLYNNSLSGSLPSRIDLALP 291 (985)
Q Consensus 220 L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~~l~ 291 (985)
|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|++|++++|.+++.....
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~------ 156 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEA------ 156 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHH------
Confidence 666666666666555555555444 6666666666652 222333444 55566666666555322111
Q ss_pred CCcEEEecCccCCCcCCccccCCCCccEEEccCccccc----ccCCcccCCCCCceEeccCCcccCCCCccccccccccc
Q 001988 292 NLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSG----FIPSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANC 367 (985)
Q Consensus 292 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l 367 (985)
++..+..+.+|+.|++++|.+++ .++..+..+++|+.|++++|.++..... .+...+..+
T Consensus 157 ---------------~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~-~l~~~~~~~ 220 (319)
T cd00116 157 ---------------LAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS-ALAETLASL 220 (319)
T ss_pred ---------------HHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH-HHHHHhccc
Confidence 11222333344444444444432 1222333444555555555555432211 122234456
Q ss_pred CcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEccCCCCCC----CCCccccccccc
Q 001988 368 KKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSG----SIPVTFGGLQKL 443 (985)
Q Consensus 368 ~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L 443 (985)
++|++|++++|++++.....+... .+ ...+.|++|++++|.++. .+...+..+++|
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~-----------------~~---~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L 280 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASA-----------------LL---SPNISLLTLSLSCNDITDDGAKDLAEVLAEKESL 280 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHH-----------------Hh---ccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCc
Confidence 667777777766653211111100 00 123456666666666542 122334444566
Q ss_pred cceecccccccCC----chhhhhhc-cCCCeEEccCCc
Q 001988 444 QGLDLAFNKLAGS----IPDEICLL-SRLNELDLNGNK 476 (985)
Q Consensus 444 ~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~L~~N~ 476 (985)
+++++++|.+... ....+... +.|++|++.+|.
T Consensus 281 ~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 281 LELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred cEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 6666666666633 22333333 566677766664
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=1.3e-18 Score=204.37 Aligned_cols=233 Identities=19% Similarity=0.190 Sum_probs=179.7
Q ss_pred CCceeeccCceeEEEEEEc-CCcEEEEEEeccC--Ccch----HHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEe
Q 001988 730 ENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ--CAST----LKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLE 802 (985)
Q Consensus 730 ~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~--~~~~----~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e 802 (985)
...++|.|++|.|+.+... .....+.|.++.+ .... ...+..|..+-..+.|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988887643 4444555544311 1111 1225567777778899999888877776665555699
Q ss_pred ccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCc
Q 001988 803 YMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDES 882 (985)
Q Consensus 803 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 882 (985)
||++ +|+..+.... .+...++..++.|+..|++|+ |..||.|||+|++|++++.+|.+||+|||.+..+.-..+.
T Consensus 402 ~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~---h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYL---HSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHH---HhcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 9999998763 577788888999999999999 8999999999999999999999999999999887544443
Q ss_pred --ceecccccccccccccccccCccch-hhhcccccccchhhhcccccccCcchhh--------------------hhHH
Q 001988 883 --TMRTQTLATIGYMAPDEIFVGELSL-KRWVNDLLPVSLVEVVDKSLLSGEEKHF--------------------AAKE 939 (985)
Q Consensus 883 --~~~~~~~gt~~y~aPE~~~~~~~~~-~~dv~~~~g~~~~~i~~~~~~~~~~~~~--------------------~~~~ 939 (985)
.....++|+..|+|||.+...+|.+ ..|+ |+.|+++..|+.++.++...... ....
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDi-wS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDV-WSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS 555 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhh-hhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence 4567788999999999999988865 4566 88888888888876654322111 1123
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 940 QCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 940 ~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..+.+...++.++++++|.+|.|+.+|++
T Consensus 556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 556 LLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hchhhHHHHHHHHccCChhheecHHHHhh
Confidence 35677888999999999999999999975
No 436
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.75 E-value=2.4e-17 Score=184.38 Aligned_cols=236 Identities=32% Similarity=0.442 Sum_probs=189.1
Q ss_pred ccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcc---hHHHHHHHHHHHHhcCCC-CeeeEEeeeecCCceEEEEec
Q 001988 728 FAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS---TLKSFEAECEVIKNIRHR-NLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~h~-niv~l~~~~~~~~~~~lv~e~ 803 (985)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++++.+......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999986 78999999866433 367789999999999988 799999999877778999999
Q ss_pred cCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC-cEEEecccCceeccCCC
Q 001988 804 MSNGSLEDCLHSSN--CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHLSDFGMAKLLSGED 880 (985)
Q Consensus 804 ~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~-~~kl~DfGla~~~~~~~ 880 (985)
+.++++.+++.... ..+.......++.|++.+++|+ |+.+++|||+||+||+++..+ .++++|||.++.+....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL---HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776654 2688889999999999999999 899999999999999999998 79999999998664333
Q ss_pred Ccc----eeccccccccccccccccc---CccchhhhcccccccchhhhcccccccCcchh----hhhH---H-------
Q 001988 881 EST----MRTQTLATIGYMAPDEIFV---GELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH----FAAK---E------- 939 (985)
Q Consensus 881 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~----~~~~---~------- 939 (985)
... ......|+..|+|||.+.. ..+....|+ |++|+.+++++.+..+...... .... .
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~-~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI-WSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhH-HHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 221 2355679999999999987 578889999 6888888887776654322211 0000 0
Q ss_pred ------H----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 001988 940 ------Q----CLLSIFSLALECTMESPEKRIDAKDTITR 969 (985)
Q Consensus 940 ------~----~~~~l~~l~~~cl~~~P~~RPt~~ev~~~ 969 (985)
. ....+.+++..|+..+|..|.++.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 01467889999999999999988887765
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=7.7e-20 Score=168.80 Aligned_cols=163 Identities=33% Similarity=0.546 Sum_probs=139.4
Q ss_pred hcccccccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhccc
Q 001988 92 EIANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRY 171 (985)
Q Consensus 92 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~ 171 (985)
.+.++.+.+.|-||+|.++ .+|+.|..|.+|++|++++|+++ .+|.++ +.+++
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-------------------------~lp~~i-ssl~k 80 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-------------------------ELPTSI-SSLPK 80 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-------------------------hcChhh-hhchh
Confidence 3567778888888898888 67888888888888888888887 677777 67888
Q ss_pred cceecccCccccccCCcccCCCCCceEEEcccccCC-CccccccccccccceEeeccccccCCchhhhcCCCCCCEEEec
Q 001988 172 LKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLS-GAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLG 250 (985)
Q Consensus 172 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 250 (985)
|+.|+++-|++. ..|..|+.++.|+.|||.+|+++ ..+|..|-.++.|+.|+|++|.+. .+|..++++++|+.|.+.
T Consensus 81 lr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lr 158 (264)
T KOG0617|consen 81 LRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLR 158 (264)
T ss_pred hhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeec
Confidence 999999988887 88999999999999999999887 467888888999999999999998 888889999999999999
Q ss_pred CCcCcccCcccccCCCCCCEEEccCCcCcccCChh
Q 001988 251 FNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSR 285 (985)
Q Consensus 251 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 285 (985)
.|.+- ..|..++.+++|++|.+.+|+++ .+|..
T Consensus 159 dndll-~lpkeig~lt~lrelhiqgnrl~-vlppe 191 (264)
T KOG0617|consen 159 DNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPE 191 (264)
T ss_pred cCchh-hCcHHHHHHHHHHHHhcccceee-ecChh
Confidence 99887 68888999999999999999888 55544
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=1.3e-19 Score=167.27 Aligned_cols=161 Identities=26% Similarity=0.494 Sum_probs=88.4
Q ss_pred ccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEE
Q 001988 439 GLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSF 518 (985)
Q Consensus 439 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 518 (985)
.+.+++.|.||+|+++ .+|+.+..+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. +.|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3455566666666666 55556666666666666666665 45666666677777777666665 456666666666666
Q ss_pred eecCCcccC-CccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEecCCCcc
Q 001988 519 DISSNLLDG-PISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKI 597 (985)
Q Consensus 519 ~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 597 (985)
|+.+|++.. ..|..|..++.|+.|+|++|.+. .+|..++.+++|+.|.+.+|.+- ..|.+++.++.|++|++.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 666655542 23333444444444444444443 44444444555555555444444 3444444444444455555444
Q ss_pred cCCCCccc
Q 001988 598 SGSIPVSF 605 (985)
Q Consensus 598 ~~~~p~~~ 605 (985)
+ .+|..+
T Consensus 186 ~-vlppel 192 (264)
T KOG0617|consen 186 T-VLPPEL 192 (264)
T ss_pred e-ecChhh
Confidence 4 334333
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=7.6e-18 Score=200.63 Aligned_cols=244 Identities=19% Similarity=0.173 Sum_probs=184.1
Q ss_pred HHHHhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcC---CCCeeeEEeeeecCCce
Q 001988 721 LLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIR---HRNLVKIISSCSNDDFK 797 (985)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---h~niv~l~~~~~~~~~~ 797 (985)
.....+.|.+.+.||+|+||.||+|...+|+.||+|+-++....+ |.-=.+++.+++ -+-|.++..++...+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 344567888899999999999999998889999999987765543 111222333333 24566777777777888
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEc-------CCCcEEEecc
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLD-------EDMVAHLSDF 870 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~-------~~~~~kl~Df 870 (985)
++|+||.+.|+|.+++... +.++|.-++.++.|++..++.| |..+|||+||||+|+|+. +...++|+||
T Consensus 770 ~lv~ey~~~Gtlld~~N~~-~~m~e~lv~~~~~qml~ive~l---H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTN-KVMDEYLVMFFSCQMLRIVEHL---HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeeeeccccccHHHhhccC-CCCCchhhhHHHHHHHHHHHHH---HhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 8999999999999999844 4789999999999999999999 899999999999999993 2346899999
Q ss_pred cCceeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc----------hhhhhHHH
Q 001988 871 GMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE----------KHFAAKEQ 940 (985)
Q Consensus 871 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~----------~~~~~~~~ 940 (985)
|.+..+.--...+.-...++|-.+-.+|...+..+++..|. +.+...++-|+.|+-..... +++...
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~Dy-fGlAa~~h~mLFG~y~q~~~g~~~~~~~~~~Ry~~~-- 922 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDY-FGLAATVHVMLFGKYMEVKNGSSWMVKTNFPRYWKR-- 922 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhh-HHHHHHHHHHHHHHHHHhcCCcceeccccchhhhhH--
Confidence 99977654344445566789999999999999999999999 66655666666655432110 111111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 941 CLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 941 ~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
+-..++...+|..|-..=|...++...++++...
T Consensus 923 --~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 923 --DMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred --HHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence 2244466667777777778888888888887654
No 440
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3.9e-17 Score=171.16 Aligned_cols=147 Identities=21% Similarity=0.190 Sum_probs=114.0
Q ss_pred HHHHhcCccCCceeeccCceeEEEEE--EcCCcEEEEEEeccCCcc------------------------hHHHHHHHHH
Q 001988 721 LLRATDNFAENNIIGIGGFGSVYRAR--LEDGVEIAIKVFHPQCAS------------------------TLKSFEAECE 774 (985)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~V~~~~--~~~~~~vAvK~~~~~~~~------------------------~~~~~~~E~~ 774 (985)
+.....-|...+.||+|+||.||+|. ..+|++||+|+++..... ....+.+|++
T Consensus 23 ~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 102 (237)
T smart00090 23 LLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR 102 (237)
T ss_pred HHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence 33444457788999999999999998 568999999998754210 0123578999
Q ss_pred HHHhcCCC--CeeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEeCC
Q 001988 775 VIKNIRHR--NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP-IIHCD 851 (985)
Q Consensus 775 il~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~-ivHrD 851 (985)
+++++.+. .+.+++++ ...++||||++|+++....... ..........++.|++++++++ |..| |+|||
T Consensus 103 ~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~L---H~~g~iiH~D 174 (237)
T smart00090 103 NLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKL---YKEGELVHGD 174 (237)
T ss_pred HHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHH---HhcCCEEeCC
Confidence 99999753 34455543 2347999999998887765332 2455666778999999999999 7899 99999
Q ss_pred CCCCCEEEcCCCcEEEecccCceec
Q 001988 852 LKPSNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 852 lk~~Nill~~~~~~kl~DfGla~~~ 876 (985)
|||+||+++ ++.++|+|||.|...
T Consensus 175 ikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 175 LSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CChhhEEEE-CCCEEEEEChhhhcc
Confidence 999999999 889999999998764
No 441
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.1e-16 Score=166.49 Aligned_cols=134 Identities=25% Similarity=0.354 Sum_probs=114.2
Q ss_pred ceeeccCceeEEEEEEcCCcEEEEEEeccCCcc--------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS--------TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+.||+|++|.||+|.. +|..|++|+....... ....+.+|++++..+.|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999988 6788999987654221 123577899999999999988877777777788999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
++|++|.+++.... + .+..++.+++.++.++ |+.+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~l---H~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKL---HSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHH---HhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999987542 2 7788999999999999 789999999999999999 78999999998765
No 442
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=1.4e-16 Score=163.76 Aligned_cols=143 Identities=23% Similarity=0.213 Sum_probs=111.9
Q ss_pred HHHHhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCcc----------------------hHHHHHHHHHHHHh
Q 001988 721 LLRATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS----------------------TLKSFEAECEVIKN 778 (985)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~----------------------~~~~~~~E~~il~~ 778 (985)
+.+....|...+.||+|+||.||+|..++|+.||||+++..... ....+..|..++.+
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 33444447888999999999999999888999999987643210 11235778999999
Q ss_pred cCCC--CeeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 001988 779 IRHR--NLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSN 856 (985)
Q Consensus 779 l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~N 856 (985)
+.|+ .++..++. +..++||||++|++|.+.... ....+++.+++.++.++ |+.||+||||||+|
T Consensus 90 l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~l---h~~gi~H~Dl~p~N 155 (198)
T cd05144 90 LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKA---YKHGIIHGDLSEFN 155 (198)
T ss_pred HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHH---HHCCCCcCCCCccc
Confidence 9877 44445442 345899999999998775431 23456889999999999 67999999999999
Q ss_pred EEEcCCCcEEEecccCceecc
Q 001988 857 VLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 857 ill~~~~~~kl~DfGla~~~~ 877 (985)
|++++++.++|+|||.+....
T Consensus 156 ill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 156 ILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEEcCCCcEEEEECCccccCC
Confidence 999999999999999997653
No 443
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=2.8e-16 Score=186.12 Aligned_cols=138 Identities=22% Similarity=0.328 Sum_probs=112.8
Q ss_pred HhcCccCCceeeccCceeEEEEEEcCCcEEEEEEeccCC-c-------chHHHHHHHHHHHHhcCCCCeeeEEeeeecCC
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQC-A-------STLKSFEAECEVIKNIRHRNLVKIISSCSNDD 795 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~-~-------~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~ 795 (985)
....|...+.||+|+||.||+|.+.+ ..+++|+..... . .....+.+|++++++++|++++....++....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 34456678999999999999998754 344555432221 1 11346789999999999999998888887777
Q ss_pred ceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 796 FKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 796 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
..++||||++|++|.+++. ....++.++++++.|| |+.+++|||+||+||++ +++.++|+|||+++.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~l---H~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKL---HKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHH---HhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 7899999999999999876 3467899999999999 78999999999999999 678999999999876
No 444
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.3e-16 Score=162.57 Aligned_cols=130 Identities=25% Similarity=0.391 Sum_probs=107.3
Q ss_pred eeeccCceeEEEEEEcCCcEEEEEEeccCCcc--------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 733 IIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS--------TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 733 ~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.||+|+||.||+|.+ ++.+|++|........ ...++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999996 5789999986543211 1355778999999999887665555555666778999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
+|++|.+.+..... .++.+++.++.++ |+.|++|||++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~l---H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKL---HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHH---HHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998765321 7899999999999 899999999999999999 89999999998865
No 445
>PLN03150 hypothetical protein; Provisional
Probab=99.67 E-value=1.9e-16 Score=189.17 Aligned_cols=151 Identities=28% Similarity=0.447 Sum_probs=117.7
Q ss_pred cCChhHHHHHHHHHHhcccCCCCcccCCCCCCCCcc----eeeeEEEeC--CC--CeEEEEEecCCcccccCchhccccc
Q 001988 26 SNISTDQQALLALKDHITYDPTNLLGTNWTSNASIC----SWIGIICDV--NS--HKVTTLNLSSFNLQGTIPPEIANLS 97 (985)
Q Consensus 26 ~~~~~~~~aLl~~k~~~~~~~~~~~~s~w~~~~~~c----~w~gv~c~~--~~--~~v~~l~L~~~~l~g~~~~~l~~l~ 97 (985)
.+.+.|.+||++||+++. +|.. . +|.+ .+|| .|.||.|+. .+ .+|+.|+|++++++|.+|+.++.|+
T Consensus 368 ~t~~~~~~aL~~~k~~~~-~~~~--~-~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLG-LPLR--F-GWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred ccCchHHHHHHHHHHhcC-Cccc--C-CCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 455789999999999985 4432 2 4974 3442 799999953 22 2699999999999999999999999
Q ss_pred ccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhccccceecc
Q 001988 98 SLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLFL 177 (985)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L~L 177 (985)
+|+.|+|++|.++|.+|..++.+++|++|+|++|+++|.+|+.+.++++|+.|+|++|+++|.+|..+.....++..+++
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~ 522 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEe
Confidence 99999999999999999999999999999999999998888777777777777777777777777665433334444444
Q ss_pred cCcc
Q 001988 178 RENM 181 (985)
Q Consensus 178 ~~n~ 181 (985)
.+|.
T Consensus 523 ~~N~ 526 (623)
T PLN03150 523 TDNA 526 (623)
T ss_pred cCCc
Confidence 4443
No 446
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.65 E-value=3.3e-17 Score=182.19 Aligned_cols=217 Identities=24% Similarity=0.261 Sum_probs=171.2
Q ss_pred eeccCceeEEEEE----EcCCcEEEEEEeccCCcc--hHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEEEeccCC
Q 001988 734 IGIGGFGSVYRAR----LEDGVEIAIKVFHPQCAS--TLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALVLEYMSN 806 (985)
Q Consensus 734 ig~G~~g~V~~~~----~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 806 (985)
+|+|+||.|++++ .+.|.-+|.|+.++.... .......|..++..++ ||.+|+++..++.+...+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999874 234667899988765322 1224567888888886 99999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceec
Q 001988 807 GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRT 886 (985)
Q Consensus 807 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 886 (985)
|++...+.... .++......+...++-+++++ |+.+|+|||+|++||+++.+|++|+.|||+++..-+.+..
T Consensus 82 g~lft~l~~~~-~f~~~~~~~~~aelaLald~l---h~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEV-MFDELDVAFYLAELALALDHL---HKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---- 153 (612)
T ss_pred chhhhccccCC-chHHHHHHHHHHHHHHHHhhc---chhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----
Confidence 99999888764 456666666777888899999 9999999999999999999999999999998876432221
Q ss_pred ccccccccccccccccCccchhhhcccccccchhhhcccccccCcch-------hhhhHHHHHHHHHHHHHHccCCCCCC
Q 001988 887 QTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEK-------HFAAKEQCLLSIFSLALECTMESPEK 959 (985)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~~P~~ 959 (985)
|||..|||||++. .. ...-.||++|+.+++++++...+...- ....+.+......+++..+...+|..
T Consensus 154 --cgt~eymApEI~~--gh-~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~n 228 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GH-LSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNPEN 228 (612)
T ss_pred --ccchhhhhhHhhh--cc-CCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHH
Confidence 8999999999987 22 334455999999999999988766521 12233445566777888888888888
Q ss_pred CCCH
Q 001988 960 RIDA 963 (985)
Q Consensus 960 RPt~ 963 (985)
|-..
T Consensus 229 rLg~ 232 (612)
T KOG0603|consen 229 RLGA 232 (612)
T ss_pred Hhcc
Confidence 7755
No 447
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.63 E-value=7e-17 Score=187.64 Aligned_cols=238 Identities=21% Similarity=0.226 Sum_probs=173.8
Q ss_pred CccCCceeeccCceeEEEEEEcCCcEEEEEEeccCC-cchHHHHHHHHHH--HHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 727 NFAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQC-ASTLKSFEAECEV--IKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 727 ~~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~i--l~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
+|...+.+|++.|=+|.+|+++.|. |+||++-++. .-..+.+.++++- ...++|||++++.-+-......|||=+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5666788999999999999998888 9999987664 2234455444443 4445899999999888777788888899
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceecc--CCCC
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS--GEDE 881 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~--~~~~ 881 (985)
+. .+|.|.+.... .+...+.+=|++|+..|+..+ |..||+|||||.+|||++.=.-+.|+||..-+... .+.+
T Consensus 103 vk-hnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qc---H~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 103 VK-HNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQC---HKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred Hh-hhhhhhhccch-HHHHHHHHHHHHHHHHHHHHH---HHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 84 48999887653 566677777999999999999 89999999999999999999999999997654321 1111
Q ss_pred cc---eecccccccccccccccccCc-----------cchhhhcccccccchhhhccc-ccccCc------chh-hhhHH
Q 001988 882 ST---MRTQTLATIGYMAPDEIFVGE-----------LSLKRWVNDLLPVSLVEVVDK-SLLSGE------EKH-FAAKE 939 (985)
Q Consensus 882 ~~---~~~~~~gt~~y~aPE~~~~~~-----------~~~~~dv~~~~g~~~~~i~~~-~~~~~~------~~~-~~~~~ 939 (985)
.. .-.....-.-|.|||.+.... .+++.|+ +++|+++.|++.. ..++.- ... ...++
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDI-FS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e 256 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDI-FSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPE 256 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhh-hhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHH
Confidence 11 111111233599999765311 5678899 9999999998764 322210 000 11222
Q ss_pred H-----HHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 001988 940 Q-----CLLSIFSLALECTMESPEKRIDAKDTITRLL 971 (985)
Q Consensus 940 ~-----~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~ 971 (985)
. ....++.++..|++.||.+|-+|.+.++.-.
T Consensus 257 ~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 257 QLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 2 2346888999999999999999999998843
No 448
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=2.3e-15 Score=147.50 Aligned_cols=134 Identities=20% Similarity=0.283 Sum_probs=115.4
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCC--CCeeeEEeeeecCCceEEEEeccCCCC
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRH--RNLVKIISSCSNDDFKALVLEYMSNGS 808 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gs 808 (985)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| ..+++++++....+..+++|||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4679999999999999864 7899999876533 4678899999999976 589999999888888999999999887
Q ss_pred hHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 809 LEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 809 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
+... +......++.+++++++++|..+..+++|||++|+||++++.+.++++|||.++.
T Consensus 80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 7654 4566778899999999999766667899999999999999999999999999875
No 449
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.61 E-value=8.6e-16 Score=171.72 Aligned_cols=198 Identities=27% Similarity=0.362 Sum_probs=157.5
Q ss_pred HHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCC
Q 001988 776 IKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPS 855 (985)
Q Consensus 776 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~ 855 (985)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+......+++.-...+..+|+.||+|+| ++....|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh--~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLH--NSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHh--cCcceeeeeeccc
Confidence 35678999999999999999999999999999999999988778999999999999999999996 5555599999999
Q ss_pred CEEEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccC-------ccchhhhcccccccchhhhcccccc
Q 001988 856 NVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVG-------ELSLKRWVNDLLPVSLVEVVDKSLL 928 (985)
Q Consensus 856 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~dv~~~~g~~~~~i~~~~~~ 928 (985)
|.++|..+.+|++|||+.................-..-|.|||.+... ..+.+.|+ |++|++++|++...-+
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi-Ys~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI-YSFGIIMYEILFRSGP 157 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCe-ehHHHHHHHHHhccCc
Confidence 999999999999999998776431111112222345569999987653 14566788 9999999999886654
Q ss_pred cCcchh----------------------hhhHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhHhh
Q 001988 929 SGEEKH----------------------FAAKEQCLLSIFSLALECTMESPEKRIDAKDTITRLLKIRDT 976 (985)
Q Consensus 929 ~~~~~~----------------------~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L~~i~~~ 976 (985)
+..... .....+..+++..++.+||..+|.+||++.++-..++.+.+.
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 433110 001113455789999999999999999999999998877654
No 450
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=6.6e-15 Score=150.03 Aligned_cols=136 Identities=24% Similarity=0.270 Sum_probs=98.9
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcch--HHH----------------------HHHHHHHHHhcCCC--Ce
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST--LKS----------------------FEAECEVIKNIRHR--NL 784 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~--~~~----------------------~~~E~~il~~l~h~--ni 784 (985)
.+.||+|+||.||+|...++++||||+++...... ... ...|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999987542211 111 13566666666443 24
Q ss_pred eeEEeeeecCCceEEEEeccCCCChHHH-hhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEEcCC
Q 001988 785 VKIISSCSNDDFKALVLEYMSNGSLEDC-LHSSNCALNIFCRLNIMIDIASALEYLHFGHS-TPIIHCDLKPSNVLLDED 862 (985)
Q Consensus 785 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivHrDlk~~Nill~~~ 862 (985)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++ |. ++|+|||+||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~l---h~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKL---YREAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHH---hhccCcCcCCCChhhEEEE-C
Confidence 445443 235899999999543321 11111 01 55678999999999999 66 9999999999999999 8
Q ss_pred CcEEEecccCceecc
Q 001988 863 MVAHLSDFGMAKLLS 877 (985)
Q Consensus 863 ~~~kl~DfGla~~~~ 877 (985)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999997654
No 451
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.59 E-value=3.1e-15 Score=157.45 Aligned_cols=225 Identities=22% Similarity=0.291 Sum_probs=143.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCc---chHHHHHHHHHHHHhcC----------CCCeeeEEeee
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCA---STLKSFEAECEVIKNIR----------HRNLVKIISSC 791 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~----------h~niv~l~~~~ 791 (985)
..+..++.||.|+++.||.+++. +++++|+|++..... .+.+++++|.-....+. |-.++..++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 34566789999999999999975 689999999864432 23455666664444432 21222222211
Q ss_pred e---------cC---C-----ceEEEEeccCCCChHHHhhc---CCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 001988 792 S---------ND---D-----FKALVLEYMSNGSLEDCLHS---SNC---ALNIFCRLNIMIDIASALEYLHFGHSTPII 848 (985)
Q Consensus 792 ~---------~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~---~~~~~~~~~i~~~i~~~L~~Lh~~h~~~iv 848 (985)
. .. . ..+++|+-+ -+||.+.+.. ... ......+..+..|+++.+++| |+.|+|
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~L---h~~GlV 167 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANL---HSYGLV 167 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTEE
T ss_pred EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH---hhcceE
Confidence 1 11 1 235677777 4588877542 111 234556677789999999999 789999
Q ss_pred eCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceeccccccccccccccccc--------Cccchhhhcccccccchh
Q 001988 849 HCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFV--------GELSLKRWVNDLLPVSLV 920 (985)
Q Consensus 849 HrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~dv~~~~g~~~~ 920 (985)
|+||||+|++++++|.++|+||+.....+ . .... ...+..|.+||.... -.++.+.|. |.+|+.++
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g---~-~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~Da-W~LG~~ly 241 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAG---T-RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDA-WQLGITLY 241 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETT---E-EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHH-HHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecC---c-eeec-cCCCcccCChhhhhhhcccCcccceeeeccCH-HHHHHHHH
Confidence 99999999999999999999999877642 1 1111 235577999986643 247888899 99999999
Q ss_pred hhcccccccCcch-------hhhhHHHHHHHHHHHHHHccCCCCCCC
Q 001988 921 EVVDKSLLSGEEK-------HFAAKEQCLLSIFSLALECTMESPEKR 960 (985)
Q Consensus 921 ~i~~~~~~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~~P~~R 960 (985)
.+.-++++.+... ......+.++.+.+++..+++++|.+|
T Consensus 242 ~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 242 SLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9998887765321 112222678899999999999999987
No 452
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=3.9e-14 Score=148.89 Aligned_cols=136 Identities=20% Similarity=0.277 Sum_probs=106.9
Q ss_pred Cceee-ccCceeEEEEEEcCCcEEEEEEeccCC-------------cchHHHHHHHHHHHHhcCCCCe--eeEEeeeecC
Q 001988 731 NNIIG-IGGFGSVYRARLEDGVEIAIKVFHPQC-------------ASTLKSFEAECEVIKNIRHRNL--VKIISSCSND 794 (985)
Q Consensus 731 ~~~ig-~G~~g~V~~~~~~~~~~vAvK~~~~~~-------------~~~~~~~~~E~~il~~l~h~ni--v~l~~~~~~~ 794 (985)
...|| .||.|+||.+... +..+|+|.+.... ......+.+|++++++++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999885 7789999885421 1123567889999999998775 6777765433
Q ss_pred C----ceEEEEeccCC-CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEec
Q 001988 795 D----FKALVLEYMSN-GSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSD 869 (985)
Q Consensus 795 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~D 869 (985)
. ..++||||++| .+|.+++... .++.. .+.++++++.+| |++||+||||||.|||++.++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~l---H~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARF---HDAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHH---HHCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6999888653 34433 356899999999 899999999999999999999999999
Q ss_pred ccCceec
Q 001988 870 FGMAKLL 876 (985)
Q Consensus 870 fGla~~~ 876 (985)
||.++..
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988763
No 453
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.52 E-value=3.1e-14 Score=148.65 Aligned_cols=184 Identities=20% Similarity=0.161 Sum_probs=132.4
Q ss_pred CCCCeeeEEeeeec---------------------------CCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHH
Q 001988 780 RHRNLVKIISSCSN---------------------------DDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDI 832 (985)
Q Consensus 780 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i 832 (985)
+|||||++.++|.+ +...|+||..++. +|.+++.... .+.....-+..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999887642 2357899998854 9999998763 4556667789999
Q ss_pred HHHHHHHHhcCCCCeEeCCCCCCCEEE--cCCC--cEEEecccCceeccCC----CCcceecccccccccccccccccCc
Q 001988 833 ASALEYLHFGHSTPIIHCDLKPSNVLL--DEDM--VAHLSDFGMAKLLSGE----DESTMRTQTLATIGYMAPDEIFVGE 904 (985)
Q Consensus 833 ~~~L~~Lh~~h~~~ivHrDlk~~Nill--~~~~--~~kl~DfGla~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~ 904 (985)
++|+.|| |.+||.|||+|++||++ |+|+ ...|+|||.+---+.. ..........|....||||+....+
T Consensus 351 LEav~hL---~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHL---HKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHH---HHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 9999999 89999999999999999 4444 5788999976432110 1111222334777899999875433
Q ss_pred c------chhhhcccccccchhhhcccccccCcch-------------hhhhHHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 001988 905 L------SLKRWVNDLLPVSLVEVVDKSLLSGEEK-------------HFAAKEQCLLSIFSLALECTMESPEKRIDAKD 965 (985)
Q Consensus 905 ~------~~~~dv~~~~g~~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~e 965 (985)
- -.+.|. |..|...+|++...-++-... -+..++.|+..+.+++...++.||.+|++++-
T Consensus 428 Gp~avvny~kAD~-WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 428 GPNAVVNYEKADT-WAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred CCceeeccchhhh-hhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence 2 135576 888889999887554332210 11234568889999999999999999998776
Q ss_pred HHHHH
Q 001988 966 TITRL 970 (985)
Q Consensus 966 v~~~L 970 (985)
....+
T Consensus 507 AANvl 511 (598)
T KOG4158|consen 507 AANVL 511 (598)
T ss_pred HHhHH
Confidence 55444
No 454
>PLN03150 hypothetical protein; Provisional
Probab=99.49 E-value=4.1e-14 Score=169.22 Aligned_cols=118 Identities=40% Similarity=0.649 Sum_probs=97.3
Q ss_pred cccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEecCCCcccCCCCccccccccccccccc
Q 001988 538 AVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLS 617 (985)
Q Consensus 538 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 617 (985)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36778888888888888888888888999999998888888888888899999999999988888888888899999999
Q ss_pred cccccCCCCCCC--CCcccccccccCCccccCCCCCCCCCCC
Q 001988 618 FNKLKGEIPRGG--PFANFTAESFMGNELLCGLPNLQVPPCK 657 (985)
Q Consensus 618 ~N~l~~~~p~~~--~~~~~~~~~~~~n~~lc~~~~~~~~~~~ 657 (985)
+|+++|.+|..- ...+.....+.+|+.+|+.|. .++|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 999998888641 223445567889999999774 35775
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=3.4e-15 Score=162.65 Aligned_cols=177 Identities=34% Similarity=0.543 Sum_probs=94.3
Q ss_pred CCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEe
Q 001988 416 LSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLN 495 (985)
Q Consensus 416 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 495 (985)
++.-...||+.|++. .+|..+..+..|+.+.|..|.+. .+|..++++..|.+|||+.|+++ ..|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 333344555555554 44555555555555555555555 45555555555555555555554 3444444443 45555
Q ss_pred eccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceecc
Q 001988 496 LGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEG 575 (985)
Q Consensus 496 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 575 (985)
+++|+++. +|. .++.+..|..||.|.|.|. .+|..++++.+|+.|++..|++.
T Consensus 150 ~sNNkl~~-lp~------------------------~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~- 202 (722)
T KOG0532|consen 150 VSNNKLTS-LPE------------------------EIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE- 202 (722)
T ss_pred EecCcccc-CCc------------------------ccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-
Confidence 55555542 333 4444555555555555555 44555566666666666666665
Q ss_pred chhhhhhcccccCeEecCCCcccCCCCccccccccccccccccccccCCC
Q 001988 576 PIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLKGEI 625 (985)
Q Consensus 576 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 625 (985)
..|+++..| .|..||+|.|+++ .+|..|.+|+.|++|-|.+|+|+..+
T Consensus 203 ~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 203 DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 344445533 3555666666665 55666666666666666666665433
No 456
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.46 E-value=1.3e-14 Score=158.72 Aligned_cols=163 Identities=26% Similarity=0.334 Sum_probs=127.3
Q ss_pred CceEEEEeccCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccC
Q 001988 795 DFKALVLEYMSNGSLEDCLHSS--NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGM 872 (985)
Q Consensus 795 ~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGl 872 (985)
.+.||.|++|...+|.+|+... ....++.....++.|++.|++| ++.+|||+||.||+...+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 3578999999999999999644 4457888899999999999999 7899999999999999999999999999
Q ss_pred ceeccCCC----CcceecccccccccccccccccCccchhhhcccccccchhhhccccccc------------Ccchhhh
Q 001988 873 AKLLSGED----ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLS------------GEEKHFA 936 (985)
Q Consensus 873 a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~------------~~~~~~~ 936 (985)
........ .....+.-+||..||+||++.+..|+.+.|+ |++|.+++|++...-.. +..+ ..
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdI-yaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip-~~ 480 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDI-YALGLILAELLIQFSTQFERIATLTDIRDGIIP-PE 480 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcch-hhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCC-hH
Confidence 98876444 1223455579999999999999999999999 99999999987622110 1111 00
Q ss_pred hHHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 001988 937 AKEQCLLSIFSLALECTMESPEKRIDAKDT 966 (985)
Q Consensus 937 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~ev 966 (985)
...+. ++=..++.+++++.|.+||++.++
T Consensus 481 ~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 481 FLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 11111 223568889999999999944443
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=2.7e-13 Score=155.01 Aligned_cols=141 Identities=23% Similarity=0.327 Sum_probs=100.8
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcchH----------------------------------------HHHH
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTL----------------------------------------KSFE 770 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~----------------------------------------~~~~ 770 (985)
.+.||+|++|.||+|+.++|+.||||+.++...... -.+.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999876531110 0244
Q ss_pred HHHHHHHhcC-----CCCeeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHhcCC
Q 001988 771 AECEVIKNIR-----HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA-LEYLHFGHS 844 (985)
Q Consensus 771 ~E~~il~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~-L~~Lh~~h~ 844 (985)
+|.+.+.+++ ++++.-..-++...+..++||||++|+++.+......... .+.+++..++.+ +..+ |.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql---~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQV---LR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHH---Hh
Confidence 5666555552 3333322222233445789999999999988765432122 234566666653 5556 78
Q ss_pred CCeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 845 TPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 845 ~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
.|++|||+||.||++++++.++++|||++..++
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 999999999999999999999999999998864
No 458
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.44 E-value=2.9e-14 Score=166.35 Aligned_cols=196 Identities=23% Similarity=0.271 Sum_probs=133.6
Q ss_pred cCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEecc
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYM 804 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~ 804 (985)
.+|..++.|..|+||.||.++++ +.+++|+| +.++.- -+++ ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l----ilRn---ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL----ILRN---ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch----hhhc---cccccCCccee-------------------
Confidence 57888999999999999999877 45678884 433311 0111 22233334333
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCC-----
Q 001988 805 SNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGE----- 879 (985)
Q Consensus 805 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~----- 879 (985)
||=...++.-+ .++. +++.+++|+ |+.||+|||+||+|.+|+.-|++|+.|||+.+.....
T Consensus 136 --gDc~tllk~~g-~lPv--------dmvla~Eyl---h~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 --GDCATLLKNIG-PLPV--------DMVLAVEYL---HSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred --chhhhhcccCC-CCcc--------hhhHHhHhh---ccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 23333333222 1111 127789999 8999999999999999999999999999998652211
Q ss_pred --------CCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc-h-------------hhhh
Q 001988 880 --------DESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE-K-------------HFAA 937 (985)
Q Consensus 880 --------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~-~-------------~~~~ 937 (985)
.......+++|||.|+|||++....|.-..|. |++|++.++.+.+..+...+ + +.+.
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdw-wamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDW-WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccH-HHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 11122356689999999999999999877776 99999999988877654433 1 1112
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCH
Q 001988 938 KEQCLLSIFSLALECTMESPEKRIDA 963 (985)
Q Consensus 938 ~~~~~~~l~~l~~~cl~~~P~~RPt~ 963 (985)
.+..+.+..+++.+.++.+|..|--.
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhccc
Confidence 22345677888888888888887633
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=7.2e-15 Score=160.16 Aligned_cols=183 Identities=28% Similarity=0.458 Sum_probs=141.7
Q ss_pred ccccccceecccCCcCCCCCCcccccCCCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhccccc
Q 001988 94 ANLSSLKSLDLSHNKLSSNIPSSIFTMSTLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLK 173 (985)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~ 173 (985)
..|+.-...||+.|++. .+|..+..+..|..|.|.+|.+. .+|..+.++..|++|||+.|+++ .+|..++ .--|+
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC--~lpLk 146 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLC--DLPLK 146 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhh--cCcce
Confidence 34445555666666665 56666666666666666666655 34555556666666666666666 7787775 23489
Q ss_pred eecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCc
Q 001988 174 HLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNN 253 (985)
Q Consensus 174 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 253 (985)
.|-+++|+++ .+|+.++.+..|..||.+.|++. .+|..++++.+|+.|.+..|++. .+|+++..| .|..||+|.|+
T Consensus 147 vli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNk 222 (722)
T KOG0532|consen 147 VLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNK 222 (722)
T ss_pred eEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCc
Confidence 9999999998 89999999999999999999998 78889999999999999999998 678888855 68899999999
Q ss_pred CcccCcccccCCCCCCEEEccCCcCcccCChhhh
Q 001988 254 LTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRID 287 (985)
Q Consensus 254 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 287 (985)
++ .+|..|.+|+.|++|.|.+|.|. +-|..+.
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 98 89999999999999999999998 6666654
No 460
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=3.5e-14 Score=167.14 Aligned_cols=239 Identities=22% Similarity=0.243 Sum_probs=186.7
Q ss_pred cCccCCceeeccCceeEEEEEEc--CCcEEEEEEeccCC--cchHHHHHHHHHHHHhcC-CCCeeeEEeeeecCCceEEE
Q 001988 726 DNFAENNIIGIGGFGSVYRARLE--DGVEIAIKVFHPQC--ASTLKSFEAECEVIKNIR-HRNLVKIISSCSNDDFKALV 800 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~--~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~lv 800 (985)
..|...+-||+|+|+.|-.+... ....+|+|.+.... .........|..+-+.+. |+|++++++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45667777999999999998753 34456777665442 223445556887777776 99999999999999999999
Q ss_pred EeccCCCChHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeEeCCCCCCCEEEcCCC-cEEEecccCceecc
Q 001988 801 LEYMSNGSLEDCL-HSSNCALNIFCRLNIMIDIASALEYLHFGH-STPIIHCDLKPSNVLLDEDM-VAHLSDFGMAKLLS 877 (985)
Q Consensus 801 ~e~~~~gsL~~~l-~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h-~~~ivHrDlk~~Nill~~~~-~~kl~DfGla~~~~ 877 (985)
+||..|+++.+.+ +......+......+..|+..++.|+ | ..++.|||+||+|.+++..+ ..|++|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~---H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYL---HPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCcccc---CcccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9999999999998 54432556666778999999999999 8 99999999999999999999 99999999999987
Q ss_pred C-CCCcceeccccc-ccccccccccccCccc-hhhhcccccccchhhhcccccccCcchh----------------hhhH
Q 001988 878 G-EDESTMRTQTLA-TIGYMAPDEIFVGELS-LKRWVNDLLPVSLVEVVDKSLLSGEEKH----------------FAAK 938 (985)
Q Consensus 878 ~-~~~~~~~~~~~g-t~~y~aPE~~~~~~~~-~~~dv~~~~g~~~~~i~~~~~~~~~~~~----------------~~~~ 938 (985)
. .+........+| ++.|+|||...+..+. ...|+ |+.|+.+..+.++...+..... ....
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~-~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDV-WSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPW 255 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCccc-ccccccccccccCCCCccccccccccceeecccccccccCcc
Confidence 6 555555666788 9999999998885444 45555 9999999999888776543311 1112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 939 EQCLLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 939 ~~~~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
........++..+++..+|..|.+.+++..
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ccCChhhhhcccccccCCchhccccccccc
Confidence 234566778888999999999998877643
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=5.3e-13 Score=153.06 Aligned_cols=196 Identities=37% Similarity=0.495 Sum_probs=102.6
Q ss_pred EEecCCcccccCchhcccccccceecccCCcCCCCCCcccccCC-CCcEEEccCcccCCCCccccccCCccceeeecccc
Q 001988 78 LNLSSFNLQGTIPPEIANLSSLKSLDLSHNKLSSNIPSSIFTMS-TLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNK 156 (985)
Q Consensus 78 l~L~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~ 156 (985)
+++..+.+... ...+..++.++.|++.+|.++ .+|+..+.++ +|++|++++|++.
T Consensus 98 l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~---------------------- 153 (394)
T COG4886 98 LDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE---------------------- 153 (394)
T ss_pred eeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh----------------------
Confidence 55555544322 223444455666666666665 4555555553 5555555555554
Q ss_pred ccCCCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchh
Q 001988 157 LSGKLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQ 236 (985)
Q Consensus 157 l~g~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 236 (985)
.+|..+ ..+++|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|..++.+..|++|.+++|++. ..+.
T Consensus 154 ---~l~~~~-~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~ 226 (394)
T COG4886 154 ---SLPSPL-RNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLS 226 (394)
T ss_pred ---hhhhhh-hccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecch
Confidence 333233 44555555555555555 45555545555666666666665 45554444455566666665433 3444
Q ss_pred hhcCCCCCCEEEecCCcCcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCC
Q 001988 237 EIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIP 308 (985)
Q Consensus 237 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 308 (985)
.+.++.++..+.+++|++. .++..+..++++++|++++|+++ .++. ...+.+++.|++++|.+....|
T Consensus 227 ~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 227 SLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhhhcccccccccCCceee-eccchhccccccceecccccccc-cccc--ccccCccCEEeccCccccccch
Confidence 5555555555555555554 23445555555555555555555 3333 2344555555555555544333
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=1.6e-12 Score=149.07 Aligned_cols=201 Identities=36% Similarity=0.494 Sum_probs=117.5
Q ss_pred ecccCccccccCCcccCCCCCceEEEcccccCCCcccccccccc-ccceEeeccccccCCchhhhcCCCCCCEEEecCCc
Q 001988 175 LFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLT-VLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNN 253 (985)
Q Consensus 175 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 253 (985)
++++.|.+. ..+..+..++.++.|++.+|.++ .+|...+.+. +|+.|++++|++. .+|..++.+++|+.|++++|+
T Consensus 98 l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 444444443 12222333455555555555555 4555455553 5566666666655 444555566666666666666
Q ss_pred CcccCcccccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCC
Q 001988 254 LTGVVPATIFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPS 333 (985)
Q Consensus 254 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (985)
++ .+|.....++.|+.|++++|+++ .+|..+. ....|++|.+++|++. ..+..+.++.++..+.+.+|++.. .+.
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~-~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIE-LLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc-cCchhhh-hhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 65 34444445556666666666665 5554331 2334666666666433 455566666777777777777663 366
Q ss_pred cccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccc
Q 001988 334 AIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGN 390 (985)
Q Consensus 334 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 390 (985)
.++.++++++|++++|+++.... +....+++.|++++|.+....|.....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~-------~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS-------LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred hhccccccceecccccccccccc-------ccccCccCEEeccCccccccchhhhcc
Confidence 67777778888888887776653 456677888888888777665554433
No 463
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.27 E-value=9.5e-12 Score=143.49 Aligned_cols=147 Identities=19% Similarity=0.267 Sum_probs=96.7
Q ss_pred cCccCCceeeccCceeEEEEEEcC-CcEEEEEEeccCCcch----------------------------------HH---
Q 001988 726 DNFAENNIIGIGGFGSVYRARLED-GVEIAIKVFHPQCAST----------------------------------LK--- 767 (985)
Q Consensus 726 ~~~~~~~~ig~G~~g~V~~~~~~~-~~~vAvK~~~~~~~~~----------------------------------~~--- 767 (985)
..|.. +.||+|++|.||+|++++ |++||||+.++..... .+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999887 9999999998652110 01
Q ss_pred ---HHHHHHHHHHhcC----CCCeeeEEeee-ecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 001988 768 ---SFEAECEVIKNIR----HRNLVKIISSC-SNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYL 839 (985)
Q Consensus 768 ---~~~~E~~il~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~L 839 (985)
.+.+|+.-+.+++ +...+.+-.++ ......++||||++|+.+.+.-.......+. ..++...++. |+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~---~~la~~~v~~--~~ 273 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDM---KLLAERGVEV--FF 273 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCH---HHHHHHHHHH--HH
Confidence 2344555444442 33333333333 2245578999999999998753211111222 2233333322 22
Q ss_pred HhcCCCCeEeCCCCCCCEEEcCCC----cEEEecccCceeccC
Q 001988 840 HFGHSTPIIHCDLKPSNVLLDEDM----VAHLSDFGMAKLLSG 878 (985)
Q Consensus 840 h~~h~~~ivHrDlk~~Nill~~~~----~~kl~DfGla~~~~~ 878 (985)
++....|++|+|+||.||+++.++ .++++|||++..++.
T Consensus 274 ~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 274 TQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 333678999999999999999988 999999999987643
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=2.5e-11 Score=121.43 Aligned_cols=128 Identities=25% Similarity=0.264 Sum_probs=96.0
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCee-eEEeeeecCCceEEEEeccCCCCh
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLV-KIISSCSNDDFKALVLEYMSNGSL 809 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL 809 (985)
.+.++.|.++.||+++.. +..|++|....... ....+.+|+++++.+.+.+++ +++.+.. +..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 356889999999999875 78899998765432 223567899999998655544 4555433 345799999999887
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 810 EDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTP-----IIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 810 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~-----ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
.+. . .....++.+++++++.| |+.+ ++|||++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~-~--------~~~~~~~~~l~~~l~~L---H~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE-D--------FSDPENLEKIAKLLKKL---HSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-c--------ccCHHHHHHHHHHHHHH---hCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 653 0 11133567899999999 5555 59999999999999 67899999998764
No 465
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.23 E-value=4e-13 Score=139.19 Aligned_cols=229 Identities=23% Similarity=0.268 Sum_probs=130.5
Q ss_pred CCCCceEEEcccccCCC----ccccccccccccceEeeccc---cccCCchh-------hhcCCCCCCEEEecCCcCccc
Q 001988 192 KCKQLQELHLGYNNLSG----AIPKEIGNLTVLQRISLINN---KLHGEIPQ-------EIGYLQNLDVLQLGFNNLTGV 257 (985)
Q Consensus 192 ~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N---~l~~~~p~-------~~~~l~~L~~L~Ls~N~l~~~ 257 (985)
.+..+++|+||+|.|.. .+.+.+.+.++|+..++++- ++...+|+ .+...++|++||||.|-+.-.
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 34445555555555432 12223334444555554432 22233443 344566889999999988754
Q ss_pred Cccc----ccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCccccccc--
Q 001988 258 VPAT----IFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFI-- 331 (985)
Q Consensus 258 ~p~~----l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-- 331 (985)
.+.. +..++.|++|+|.||.+.-.-...+...|..|. .|+ -..+-++|+++..++|++....
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~-----~~k-------k~~~~~~Lrv~i~~rNrlen~ga~ 175 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELA-----VNK-------KAASKPKLRVFICGRNRLENGGAT 175 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHH-----HHh-------ccCCCcceEEEEeeccccccccHH
Confidence 4433 456788999999999886322222222221111 121 2334567888888888886533
Q ss_pred --CCcccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceecccccccccc
Q 001988 332 --PSAIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNI 409 (985)
Q Consensus 332 --p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~ 409 (985)
...|...+.|+.+.++.|.|..... .....+|..|++|+.|||.+|-++..-.. .+
T Consensus 176 ~~A~~~~~~~~leevr~~qN~I~~eG~-~al~eal~~~~~LevLdl~DNtft~egs~---------------------~L 233 (382)
T KOG1909|consen 176 ALAEAFQSHPTLEEVRLSQNGIRPEGV-TALAEALEHCPHLEVLDLRDNTFTLEGSV---------------------AL 233 (382)
T ss_pred HHHHHHHhccccceEEEecccccCchh-HHHHHHHHhCCcceeeecccchhhhHHHH---------------------HH
Confidence 2345566788888888888765443 23455678888888888888877632111 22
Q ss_pred CCcCCCCCCccEEEccCCCCCCCCCcccc-----ccccccceeccccccc
Q 001988 410 PKAIGNLSNLIVLSLGGNNLSGSIPVTFG-----GLQKLQGLDLAFNKLA 454 (985)
Q Consensus 410 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~ 454 (985)
..++..+++|++|++++|.+...-..+|. ..++|+.|.+.+|.|+
T Consensus 234 akaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 234 AKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 34555666777777777776643332221 2455666666666554
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.22 E-value=3.4e-12 Score=128.76 Aligned_cols=136 Identities=25% Similarity=0.259 Sum_probs=105.0
Q ss_pred CcCcCcCceEeeccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccce
Q 001988 485 LGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQ 564 (985)
Q Consensus 485 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 564 (985)
......|+++|||+|.|+. +.+...-++.++.|++|+|.|..+.. +..+++|+.||||+|.++ .+..+=..|.+++
T Consensus 280 ~dTWq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchhh-hhhhhhhccceeEEeccccceeeehh--hhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 3445567777777777774 45556667777888888888775443 677888899999999887 4445556688999
Q ss_pred eeeeecceeccchhhhhhcccccCeEecCCCcccCC-CCccccccccccccccccccccCCCC
Q 001988 565 NISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGS-IPVSFEKLSYLKELNLSFNKLKGEIP 626 (985)
Q Consensus 565 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~p 626 (985)
.|.|+.|.|.. -..+.++-+|..||+++|+|... --..+++||-|+.+.|.+|++.+.+-
T Consensus 356 tL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 356 TLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred eeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 99999999973 45688899999999999999742 22468999999999999999997654
No 467
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.22 E-value=2.3e-10 Score=114.65 Aligned_cols=137 Identities=22% Similarity=0.223 Sum_probs=99.8
Q ss_pred CceeeccCceeEEEEEEcC-------CcEEEEEEeccCCc----------------------chHHH----HHHHHHHHH
Q 001988 731 NNIIGIGGFGSVYRARLED-------GVEIAIKVFHPQCA----------------------STLKS----FEAECEVIK 777 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~-------~~~vAvK~~~~~~~----------------------~~~~~----~~~E~~il~ 777 (985)
...||.|--+.||.|...+ +..+|||+++.... ...+. .++|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998553 47899999853210 01122 348999999
Q ss_pred hcCC--CCeeeEEeeeecCCceEEEEeccCCCChHH-HhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 001988 778 NIRH--RNLVKIISSCSNDDFKALVLEYMSNGSLED-CLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKP 854 (985)
Q Consensus 778 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~ 854 (985)
++.. -++.+.+++ ...++||||+.++.+.. .++. ..++..+...+..+++.++.+++ |..|+||||+++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~--H~~glVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLY--KECNLVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHH--HhCCeecCCCCH
Confidence 9853 456667765 34679999997654422 2222 13444556678899999999996 789999999999
Q ss_pred CCEEEcCCCcEEEecccCceec
Q 001988 855 SNVLLDEDMVAHLSDFGMAKLL 876 (985)
Q Consensus 855 ~Nill~~~~~~kl~DfGla~~~ 876 (985)
.||+++ ++.++++|||.+...
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeC
Confidence 999997 468999999988765
No 468
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.2e-11 Score=126.79 Aligned_cols=195 Identities=19% Similarity=0.206 Sum_probs=142.0
Q ss_pred HHHHhcCCCCeeeEEeeeecCC-----ceEEEEeccCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 001988 774 EVIKNIRHRNLVKIISSCSNDD-----FKALVLEYMSNGSLEDCLHSS---NCALNIFCRLNIMIDIASALEYLHFGHST 845 (985)
Q Consensus 774 ~il~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~ 845 (985)
.-+-++.|.|+|+++.||.+.. ...++.||+..|++..+|++. ...+......+|+.||..||.|||. .++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 3344567999999999996543 467899999999999999764 4457778889999999999999986 788
Q ss_pred CeEeCCCCCCCEEEcCCCcEEEecccCc--eeccCCCCcceecccccccccccccccccCccchhhhcccccccchhhhc
Q 001988 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMA--KLLSGEDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVV 923 (985)
Q Consensus 846 ~ivHrDlk~~Nill~~~~~~kl~DfGla--~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~ 923 (985)
.|+|+++..+-|++..+|-+|++----. ...........+....+-++|.|||.-.....+.+.|+ |.+|..++++.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dI-y~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDI-YKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhh-hhhhHHHHHHH
Confidence 8999999999999999999987521110 00000000111122246789999998888888889999 99999999999
Q ss_pred ccccccCcchhhhhHHHH---------HHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 924 DKSLLSGEEKHFAAKEQC---------LLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~---------~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
.+++...........++. ...=+..+++|+...|..||+|++++...
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 888875443211111110 11123478899999999999999987654
No 469
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=2.4e-10 Score=109.68 Aligned_cols=131 Identities=22% Similarity=0.369 Sum_probs=102.4
Q ss_pred ceeeccCceeEEEEEEcCCcEEEEEEeccCCcc--------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEec
Q 001988 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS--------TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEY 803 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~ 803 (985)
..+++|+-+.+|.+.+. |.++++|.-.++... ......+|++++.+++--.|...+=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999875 555777755444222 123567899999998766666666666677778899999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCcee
Q 001988 804 MSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKL 875 (985)
Q Consensus 804 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~ 875 (985)
++|-.|.+.+... ...++..+-+-+.-| |..||||+|+.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~l---H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKL---HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHH---HhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998999888765 244667777888889 899999999999999998765 99999999864
No 470
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16 E-value=3.7e-11 Score=134.73 Aligned_cols=236 Identities=25% Similarity=0.253 Sum_probs=176.6
Q ss_pred CccCCceeec--cCceeEEEEEE---cCCcEEEEEEeccCCc--chHHHHHHHHHHHHhc-CCCCeeeEEeeeecCCceE
Q 001988 727 NFAENNIIGI--GGFGSVYRARL---EDGVEIAIKVFHPQCA--STLKSFEAECEVIKNI-RHRNLVKIISSCSNDDFKA 798 (985)
Q Consensus 727 ~~~~~~~ig~--G~~g~V~~~~~---~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 798 (985)
.|.....+|. |.+|.||.+.. +++..+|+|+-+.... .....=.+|+...+++ .|++.++.+..+.+++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556778999 99999999976 3788899998443322 2222335677777777 4999999999999999999
Q ss_pred EEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCc
Q 001988 799 LVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIAS----ALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMA 873 (985)
Q Consensus 799 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~----~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla 873 (985)
+-+|++ +.++.++.+.....++....+.+..+..+ |+.++ |+.+++|-|+||.||+...+ ...+++|||+.
T Consensus 195 iqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~---hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHL---HSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhccccccccc---CCCcccccccchhheecccccceeecCCccee
Confidence 999999 57888888876656777788888888888 99999 99999999999999999999 89999999999
Q ss_pred eeccCCCCcce---ecccccccccccccccccCccchhhhcccccccchhhhcccccccCcc---------hhhhhHHHH
Q 001988 874 KLLSGEDESTM---RTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEE---------KHFAAKEQC 941 (985)
Q Consensus 874 ~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~---------~~~~~~~~~ 941 (985)
..+.+..-... .....|...|++||. ..+.++...|+ +++|.++.+.+.+....... ..+.+.+.|
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~-~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~ 348 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKEL-LNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFC 348 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhh-hccccchHhhh-cchhhhhHhhHhhcccccCCCCCCccccccccCchhhh
Confidence 98865442211 122257788999986 45667788888 88888877766544322111 111222222
Q ss_pred ---HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 001988 942 ---LLSIFSLALECTMESPEKRIDAKDTIT 968 (985)
Q Consensus 942 ---~~~l~~l~~~cl~~~P~~RPt~~ev~~ 968 (985)
..++...+..+++.+|..|++++.+..
T Consensus 349 ~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 349 EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 345556889999999999998877653
No 471
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=2.2e-10 Score=129.31 Aligned_cols=215 Identities=19% Similarity=0.193 Sum_probs=150.0
Q ss_pred EcCCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHH
Q 001988 747 LEDGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRL 826 (985)
Q Consensus 747 ~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~ 826 (985)
..++.+|.|...+...........+-++-++.++||||++|++.++..+..|+|+|-+. .|..++++.+ .....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence 44788999998887655445567888999999999999999999999999999999984 5777776543 44555
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccCCCCcceecccccccccccccccccCccc
Q 001988 827 NIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSGEDESTMRTQTLATIGYMAPDEIFVGELS 906 (985)
Q Consensus 827 ~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 906 (985)
-.++||+.||.||| +..+++|++|.-+-|+++..|+.||++|.++....+... ......---.|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~--~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLN--DDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHh--ccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 57899999999997 799999999999999999999999999998876543322 111111223466776543333
Q ss_pred hhhhcccccccchhhhcccccccCcchhhh--hHH--------------HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 001988 907 LKRWVNDLLPVSLVEVVDKSLLSGEEKHFA--AKE--------------QCLLSIFSLALECTMESPEKRIDAKDTITRL 970 (985)
Q Consensus 907 ~~~dv~~~~g~~~~~i~~~~~~~~~~~~~~--~~~--------------~~~~~l~~l~~~cl~~~P~~RPt~~ev~~~L 970 (985)
+..|. |.+|+++++++.+........... .+. .......+.+..|...-+-.|=.+-+++..|
T Consensus 182 ~s~D~-~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~fL 260 (690)
T KOG1243|consen 182 WSIDS-WGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLLFL 260 (690)
T ss_pred cchhh-hhHHHHHHHHhCcccCcchhhhccCccchhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHHHHHH
Confidence 44566 889999999999844332221100 000 0011144566666666666666666666666
Q ss_pred HHhH
Q 001988 971 LKIR 974 (985)
Q Consensus 971 ~~i~ 974 (985)
++++
T Consensus 261 eel~ 264 (690)
T KOG1243|consen 261 EELR 264 (690)
T ss_pred Hhcc
Confidence 5543
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=2e-11 Score=129.99 Aligned_cols=215 Identities=23% Similarity=0.263 Sum_probs=127.7
Q ss_pred CCCCceEEEcccccCCCccc--cccccccccceEeeccccccCCc--hhhhcCCCCCCEEEecCCcCcccCcccc-cCCC
Q 001988 192 KCKQLQELHLGYNNLSGAIP--KEIGNLTVLQRISLINNKLHGEI--PQEIGYLQNLDVLQLGFNNLTGVVPATI-FNMS 266 (985)
Q Consensus 192 ~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~ 266 (985)
++++|++..|.+..+. ..+ .....+++++.|||+.|-+.... -.....|++|+.|+|+.|++........ ..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 4555666666665554 222 23445666666666666665322 2334567777777777777653221111 2466
Q ss_pred CCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCccccccc-CCcccCCCCCceEe
Q 001988 267 TLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFI-PSAIGNLRNLKLFD 345 (985)
Q Consensus 267 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~ 345 (985)
+|+.|.|+.|.++..--.++...+|+|+.|+|..|...+.-......+..|+.|||++|++-... -...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 78888888888874444455567888888999888643344445555778888888888876432 14567788888888
Q ss_pred ccCCcccCCCCc-ccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEc
Q 001988 346 IFFNNLTSSTPE-LGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSL 424 (985)
Q Consensus 346 L~~N~l~~~~~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 424 (985)
++.+.+.++... .+.......+++|++|+++.|++... ..-..+..+++|+.|.+
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w------------------------~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDW------------------------RSLNHLRTLENLKHLRI 333 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccc------------------------cccchhhccchhhhhhc
Confidence 888887765321 11111233445555555555555321 01123444566777777
Q ss_pred cCCCCCC
Q 001988 425 GGNNLSG 431 (985)
Q Consensus 425 ~~N~l~~ 431 (985)
..|.++.
T Consensus 334 ~~n~ln~ 340 (505)
T KOG3207|consen 334 TLNYLNK 340 (505)
T ss_pred ccccccc
Confidence 7777764
No 473
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=9.7e-12 Score=132.32 Aligned_cols=210 Identities=20% Similarity=0.228 Sum_probs=124.5
Q ss_pred cCCCCcEEEccCcccCCCCc-cccccCCccceeeeccccccCCCC-hhHhhhccccceecccCccccccCCccc-CCCCC
Q 001988 119 TMSTLKVLYLMDNQLSGSLS-SFTFNTSSILDIRLSKNKLSGKLP-ENICNHLRYLKHLFLRENMFYGKIPSSL-SKCKQ 195 (985)
Q Consensus 119 ~l~~L~~L~Ls~n~l~~~~~-~~~~~~~~L~~L~ls~n~l~g~lp-~~~~~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~ 195 (985)
++.+|++.-|.+........ +....++++++||||.|-|...-| -.+...|++|+.|+|+.|.+.-.+.+.. ..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 45666666666655542111 344456666666666666654333 2455667777777777777653332221 24566
Q ss_pred ceEEEcccccCCCc-cccccccccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCcccCc--ccccCCCCCCEEE
Q 001988 196 LQELHLGYNNLSGA-IPKEIGNLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLTGVVP--ATIFNMSTLKEIF 272 (985)
Q Consensus 196 L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~ 272 (985)
|+.|.|+.|.++.. +-.....+++|+.|+|..|...+........++.|+.|||++|++-. .+ ...+.++.|+.|.
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhh
Confidence 77777777777622 22234456777777777775333334445556677777777777652 33 4456677777777
Q ss_pred ccCCcCccc-CChh----hhhcCCCCcEEEecCccCCCc-CCccccCCCCccEEEccCccccc
Q 001988 273 LYNNSLSGS-LPSR----IDLALPNLEFLNLGINSFSGT-IPSSITNASKLILLEMGSNSFSG 329 (985)
Q Consensus 273 L~~N~l~~~-~p~~----~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~ 329 (985)
++.+.+... +|+. ....+++|++|+++.|+|... .-..+..+.+|+.|....|.++.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 777777621 2221 123567888888888888532 12344556677777777887764
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=4.7e-11 Score=120.61 Aligned_cols=131 Identities=31% Similarity=0.395 Sum_probs=78.4
Q ss_pred cccccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEEe
Q 001988 440 LQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFD 519 (985)
Q Consensus 440 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 519 (985)
.+.|+++|||+|.|+ .+.++..-.+.++.|++++|.|..+ ..+..+++|+.||||+|.++.. ..
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~-~G------------ 346 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAEC-VG------------ 346 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhh-hh------------
Confidence 344555555555555 3444444455555555555555421 1144445555555555544421 22
Q ss_pred ecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccch-hhhhhcccccCeEecCCCccc
Q 001988 520 ISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPI-PESFGNMTSLESLDLSNNKIS 598 (985)
Q Consensus 520 ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 598 (985)
+-..+.+.+.|.|+.|.|... ..++.|-+|..||+++|+|.... ...+++++-|+.|.|.+|.|.
T Consensus 347 ------------wh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 347 ------------WHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred ------------hHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 223445566666666666422 45667778888888888887432 456899999999999999998
Q ss_pred CC
Q 001988 599 GS 600 (985)
Q Consensus 599 ~~ 600 (985)
+.
T Consensus 413 ~~ 414 (490)
T KOG1259|consen 413 GS 414 (490)
T ss_pred cc
Confidence 54
No 475
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=1.3e-09 Score=103.85 Aligned_cols=142 Identities=22% Similarity=0.228 Sum_probs=105.8
Q ss_pred CCceeeccCceeEEEEEEcCCcEEEEEEeccCCcc--------hHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEEEE
Q 001988 730 ENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAS--------TLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKALVL 801 (985)
Q Consensus 730 ~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~lv~ 801 (985)
....+-+|+-+.|+++.+. |+.+.||.-..+... ..++..+|++++.++.--.|.-..=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578899999999999985 888888854333211 2346678999999987555555444555555667999
Q ss_pred eccCC-CChHHHhhcCCCCCCHHH-HHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC---cEEEecccCcee
Q 001988 802 EYMSN-GSLEDCLHSSNCALNIFC-RLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHLSDFGMAKL 875 (985)
Q Consensus 802 e~~~~-gsL~~~l~~~~~~~~~~~-~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~---~~kl~DfGla~~ 875 (985)
||++| .++.+++......-.... ...++..|-+.+.-| |..+|||+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igkl---H~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKL---HDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHh---hhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 478888776532222223 367889999999999 899999999999999996655 468999999754
No 476
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.07 E-value=1.3e-09 Score=114.42 Aligned_cols=142 Identities=20% Similarity=0.253 Sum_probs=110.5
Q ss_pred ceeeccCceeEEEEEEcCCcEEEEEEeccCCc-chHHHHHHHHHHHHhcCC--CCeeeEEeeeecC---CceEEEEeccC
Q 001988 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCA-STLKSFEAECEVIKNIRH--RNLVKIISSCSND---DFKALVLEYMS 805 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~h--~niv~l~~~~~~~---~~~~lv~e~~~ 805 (985)
+.++.|.++.||++...+|+.+++|....... .....+..|.++++.+.+ ..+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999998765422 134578899999999975 3467778877654 36689999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 001988 806 NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFG------------------------------------------- 842 (985)
Q Consensus 806 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~------------------------------------------- 842 (985)
|+++.+.+.. ..++......++.++++++.+||..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888776542 2456777778888888888888731
Q ss_pred ----------CCCCeEeCCCCCCCEEEcC--CCcEEEecccCcee
Q 001988 843 ----------HSTPIIHCDLKPSNVLLDE--DMVAHLSDFGMAKL 875 (985)
Q Consensus 843 ----------h~~~ivHrDlk~~Nill~~--~~~~kl~DfGla~~ 875 (985)
-...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0255799999999999998 67789999998764
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=2.2e-11 Score=139.71 Aligned_cols=215 Identities=34% Similarity=0.399 Sum_probs=152.7
Q ss_pred cccceeccccccccccCCcCCCCCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEcc
Q 001988 394 SLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLN 473 (985)
Q Consensus 394 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 473 (985)
.++.+++..|.|.. +-..+..+++|+.|++.+|+|..+.. .+..+++|++|++++|.|+... .+..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheecccccccccc--chhhccchhhheec
Confidence 45666677776663 33456777888888888888874332 2667888888888888888553 35667778888888
Q ss_pred CCccccccCCCCcCcCcCceEeeccceeeeecC-CCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCcc
Q 001988 474 GNKISGSISSCLGNLTSLQYLNLGSNRFTFVIP-STFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGN 552 (985)
Q Consensus 474 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 552 (985)
+|.|+.. ..+..++.|+.+++++|+++.+.+ . ...+.+++.+++.+|.+..+. .+..+..+..+++..|.++..
T Consensus 149 ~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 149 GNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred cCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccccceec
Confidence 8888742 446668888888888888886655 2 466777888888888887443 344455566668888888744
Q ss_pred Cchhhccccc--ceeeeeecceeccchhhhhhcccccCeEecCCCcccCCCCcccccccccccccccccccc
Q 001988 553 IPTTLEGLKS--LQNISLAYNRLEGPIPESFGNMTSLESLDLSNNKISGSIPVSFEKLSYLKELNLSFNKLK 622 (985)
Q Consensus 553 ~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 622 (985)
-+ +..+.. |+.+++++|++. .++..+..+..+..||+++|++... ..+.....+..+..+.|++.
T Consensus 224 ~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 224 EG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 22 223333 888999999888 3446777888889999999988754 23556677788888888776
No 478
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.06 E-value=1e-11 Score=128.85 Aligned_cols=138 Identities=22% Similarity=0.260 Sum_probs=65.7
Q ss_pred CCCCEEEecCCcCccc----CcccccCCCCCCEEEccCCcCcccC---ChhhhhcCCCCcEEEecCccCCCc----CCcc
Q 001988 242 QNLDVLQLGFNNLTGV----VPATIFNMSTLKEIFLYNNSLSGSL---PSRIDLALPNLEFLNLGINSFSGT----IPSS 310 (985)
Q Consensus 242 ~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~---p~~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 310 (985)
+.|+++..++|++..- +...|...+.|+++.++.|.|...- -..-+..+++|+.|||..|-|+-. +.+.
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 4566666666665421 2233444455666666666554111 111233455666666666655532 2234
Q ss_pred ccCCCCccEEEccCcccccccCCcc-----cCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCC
Q 001988 311 ITNASKLILLEMGSNSFSGFIPSAI-----GNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPL 380 (985)
Q Consensus 311 ~~~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 380 (985)
++.+++|+.|++++|.++.....++ ...++|+.|.+.+|.++...... ...+....+.|+.|+|++|.+
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~-la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALA-LAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHH-HHHHHhcchhhHHhcCCcccc
Confidence 4445556666666666554322222 22455666666666655432111 111233345555555555555
No 479
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.04 E-value=1.9e-11 Score=140.30 Aligned_cols=247 Identities=26% Similarity=0.298 Sum_probs=138.2
Q ss_pred cCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCCccCCCCccchhhcccceeccccccccccCCcCCC
Q 001988 336 GNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLDGFLPSSIGNLSLSLERLNIAFCNISGNIPKAIGN 415 (985)
Q Consensus 336 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~ 415 (985)
..+..++.+++..|.+.... ..+..+++|+.|++.+|++..... .+..
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~------~~l~~~~~l~~l~l~~n~i~~i~~--------------------------~l~~ 116 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKIL------NHLSKLKSLEALDLYDNKIEKIEN--------------------------LLSS 116 (414)
T ss_pred HHhHhHHhhccchhhhhhhh------cccccccceeeeeccccchhhccc--------------------------chhh
Confidence 34555666667777666521 124455666666666666653221 1344
Q ss_pred CCCccEEEccCCCCCCCCCccccccccccceecccccccCCchhhhhhccCCCeEEccCCccccccC-CCCcCcCcCceE
Q 001988 416 LSNLIVLSLGGNNLSGSIPVTFGGLQKLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSIS-SCLGNLTSLQYL 494 (985)
Q Consensus 416 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L 494 (985)
+++|++|+|++|.|+.+.+ +..++.|+.|++++|.|+.. ..+..+++|+.+++++|+++...+ . ...+.+++.+
T Consensus 117 ~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l 191 (414)
T KOG0531|consen 117 LVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEEL 191 (414)
T ss_pred hhcchheeccccccccccc--hhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHH
Confidence 5555555555555553322 33344455555555555522 223335555555555555553322 1 3455555666
Q ss_pred eeccceeeeecCCCccCccceeEEeecCCcccCCccccccCCC--cccEEEccCCccCccCchhhcccccceeeeeecce
Q 001988 495 NLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLK--AVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNR 572 (985)
Q Consensus 495 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 572 (985)
++.+|.+..+ ..+..+..+..+++..|.+....+ +..+. .|+.+++++|.+. ..+..+..+..+..|++++|+
T Consensus 192 ~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~ 266 (414)
T KOG0531|consen 192 DLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNR 266 (414)
T ss_pred hccCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcc
Confidence 6666655432 223334444444555565553322 11222 2677788888877 334566777888888888888
Q ss_pred eccchhhhhhcccccCeEecCCCcccCC---CCcc-ccccccccccccccccccCCCC
Q 001988 573 LEGPIPESFGNMTSLESLDLSNNKISGS---IPVS-FEKLSYLKELNLSFNKLKGEIP 626 (985)
Q Consensus 573 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~-~~~l~~L~~L~ls~N~l~~~~p 626 (985)
+... ..+.....+..+.++.|.+... .... ....+.+..+.+.+|+.....+
T Consensus 267 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 267 ISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 8743 2355666777888888887632 2222 5566778888888888876655
No 480
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1.6e-10 Score=113.30 Aligned_cols=102 Identities=25% Similarity=0.327 Sum_probs=40.6
Q ss_pred ccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhh-cccccceeeeeecceeccc-hhhhhhcccccCe
Q 001988 512 LKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTL-EGLKSLQNISLAYNRLEGP-IPESFGNMTSLES 589 (985)
Q Consensus 512 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 589 (985)
+.+|+.||+|+|.|+.+. .+..++.|+.|++++|+|+.. +..+ ..+++|+.|+|++|+|... .-..++.+++|+.
T Consensus 41 l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~ 117 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV 117 (175)
T ss_dssp -TT--EEE-TTS--S--T--T----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E
T ss_pred hcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCcc-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce
Confidence 344444444444444332 244566666666677766643 3333 3567777777777777642 1245677788888
Q ss_pred EecCCCcccCCCCc----cccccccccccccc
Q 001988 590 LDLSNNKISGSIPV----SFEKLSYLKELNLS 617 (985)
Q Consensus 590 L~Ls~N~l~~~~p~----~~~~l~~L~~L~ls 617 (985)
|+|.+|.++.. +. .+..+|+|+.||-.
T Consensus 118 L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 118 LSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred eeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 88888888743 32 36678888887754
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=2.5e-10 Score=112.03 Aligned_cols=61 Identities=30% Similarity=0.447 Sum_probs=9.9
Q ss_pred CCCCCceEEEcccccCCCccccccc-cccccceEeeccccccCCchhhhcCCCCCCEEEecCCcCc
Q 001988 191 SKCKQLQELHLGYNNLSGAIPKEIG-NLTVLQRISLINNKLHGEIPQEIGYLQNLDVLQLGFNNLT 255 (985)
Q Consensus 191 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 255 (985)
.+..++++|+|++|.|+ .+ +.++ .+.+|+.|+|++|.|+. ++ .+..+++|+.|++++|+|+
T Consensus 16 ~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred ccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC
Confidence 33445566666666665 22 2343 34555555555555552 21 3444455555555555554
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.02 E-value=3e-10 Score=127.55 Aligned_cols=242 Identities=22% Similarity=0.126 Sum_probs=175.9
Q ss_pred HHhcCccCCceeeccCceeEEEEEE--cCCcEEEEEEeccCCcchHHHH--HHHHHHHHhc-CCCCeeeEEeeeecCCce
Q 001988 723 RATDNFAENNIIGIGGFGSVYRARL--EDGVEIAIKVFHPQCASTLKSF--EAECEVIKNI-RHRNLVKIISSCSNDDFK 797 (985)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~V~~~~~--~~~~~vAvK~~~~~~~~~~~~~--~~E~~il~~l-~h~niv~l~~~~~~~~~~ 797 (985)
....+|.....||.|.|+.|+.... .++..||+|...........++ ..|+.+...+ .|.++++++..|......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456788889999999999999864 4788899998876644433332 4566666666 599999999999888888
Q ss_pred EEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCC-CcEEEecccCceec
Q 001988 798 ALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHLSDFGMAKLL 876 (985)
Q Consensus 798 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~-~~~kl~DfGla~~~ 876 (985)
|+--|||++++......- ...++...++++..|++.++.++ |++.++|+|+||+||++..+ +..+++|||.++.+
T Consensus 342 ~ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i---~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVI---HSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cCchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccc---cchhhhcccccccceeeccchhhhhcccccccccc
Confidence 899999999988766522 23466777888899999999999 89999999999999999886 88999999998753
Q ss_pred cCCCCcceecccccccccc--cccccccCccchhhhcccccccchhhhcccccccCcchh--------hhhHHHHHHHHH
Q 001988 877 SGEDESTMRTQTLATIGYM--APDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH--------FAAKEQCLLSIF 946 (985)
Q Consensus 877 ~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~l~ 946 (985)
.-.. ....++-+++ +|+......+..+.|+ ++++.-+.+.+++..+...... .........++.
T Consensus 418 ~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~-~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~p~~~~~~~~~q 491 (524)
T KOG0601|consen 418 AFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADI-FSLGLSVDEAITGSPLSESGVQSLTIRSGDTPNLPGLKLQLQ 491 (524)
T ss_pred ceec-----ccccccccccccchhhcccccccccccc-ccccccccccccCcccCcccccceeeecccccCCCchHHhhh
Confidence 2111 1112334444 4444444556667777 8998888888887765543211 111122236677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHhH
Q 001988 947 SLALECTMESPEKRIDAKDTITRLLKIR 974 (985)
Q Consensus 947 ~l~~~cl~~~P~~RPt~~ev~~~L~~i~ 974 (985)
.+.+.+..+++..||.+.+....-+..+
T Consensus 492 ~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 492 VLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred hhhhhhcCCccccchhhhhhcccchhhh
Confidence 7888999999999999988776554433
No 483
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.98 E-value=3.9e-09 Score=105.52 Aligned_cols=126 Identities=23% Similarity=0.284 Sum_probs=84.3
Q ss_pred eEEEEEEcCCcEEEEEEeccCCc-------------c-------------hHHHHHHHHHHHHhcCCC--CeeeEEeeee
Q 001988 741 SVYRARLEDGVEIAIKVFHPQCA-------------S-------------TLKSFEAECEVIKNIRHR--NLVKIISSCS 792 (985)
Q Consensus 741 ~V~~~~~~~~~~vAvK~~~~~~~-------------~-------------~~~~~~~E~~il~~l~h~--niv~l~~~~~ 792 (985)
.||.|...+|.+||+|+.+.... . .....++|.+.|.++... ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999999854210 0 123467899999999765 466666553
Q ss_pred cCCceEEEEeccC--CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecc
Q 001988 793 NDDFKALVLEYMS--NGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDF 870 (985)
Q Consensus 793 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~Df 870 (985)
..++||||++ |..+....... ++......++.+++..+..++ |..||+|+|+.+.||+++++ .+.++||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~--~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKML--HKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHH--HCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHH--HhcCceecCCChhhEEeecc-eEEEEec
Confidence 3469999998 54444332221 112334567778888777764 79999999999999999988 9999999
Q ss_pred cCceec
Q 001988 871 GMAKLL 876 (985)
Q Consensus 871 Gla~~~ 876 (985)
|.+...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 988764
No 484
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.94 E-value=6.2e-10 Score=82.08 Aligned_cols=40 Identities=43% Similarity=0.985 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHhcccCCCCcccCCCCCC--CCcceeeeEEEe
Q 001988 29 STDQQALLALKDHITYDPTNLLGTNWTSN--ASICSWIGIICD 69 (985)
Q Consensus 29 ~~~~~aLl~~k~~~~~~~~~~~~s~w~~~--~~~c~w~gv~c~ 69 (985)
+.|++||++||+++..+|.+.+.+ |+.+ ++||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~-W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSS-WNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT---TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCccccc-CCCcCCCCCeeeccEEeC
Confidence 579999999999998778777776 9976 799999999996
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.90 E-value=8.6e-10 Score=134.79 Aligned_cols=93 Identities=29% Similarity=0.346 Sum_probs=70.3
Q ss_pred CCChhHhhhccccceecccCccccccCCcccCCCCCceEEEcccccCCCccccccccccccceEeeccccccCCchhhhc
Q 001988 160 KLPENICNHLRYLKHLFLRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNKLHGEIPQEIG 239 (985)
Q Consensus 160 ~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 239 (985)
.++..+|..++.|++|||++|.=-+.+|+++++|-+||+|+|++..++ .+|..+++|..|.+|++..+.-...+|....
T Consensus 561 ~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~ 639 (889)
T KOG4658|consen 561 EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILL 639 (889)
T ss_pred hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhh
Confidence 566666777888888888877665678888888888888888888887 6788888888888888887776555666666
Q ss_pred CCCCCCEEEecCCc
Q 001988 240 YLQNLDVLQLGFNN 253 (985)
Q Consensus 240 ~l~~L~~L~Ls~N~ 253 (985)
.|++|++|.+-.-.
T Consensus 640 ~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 640 ELQSLRVLRLPRSA 653 (889)
T ss_pred hcccccEEEeeccc
Confidence 77888887776554
No 486
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=3.1e-08 Score=105.27 Aligned_cols=141 Identities=15% Similarity=0.117 Sum_probs=102.1
Q ss_pred CceeeccCceeEEEEEEcCCcEEEEEEeccCCcch-----------HHHHHHHHHHHHhcCCCCe--eeEEeeeec----
Q 001988 731 NNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST-----------LKSFEAECEVIKNIRHRNL--VKIISSCSN---- 793 (985)
Q Consensus 731 ~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~-----------~~~~~~E~~il~~l~h~ni--v~l~~~~~~---- 793 (985)
++.+-......|+++.. +|+.|.||......... ...+.+|.+.+.++...+| ++.+++.+.
T Consensus 27 ~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 27 GEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 35555555566778776 57899999775432110 1147899999988853333 344445432
Q ss_pred -CCceEEEEeccCCC-ChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcC-------CC
Q 001988 794 -DDFKALVLEYMSNG-SLEDCLHSS-NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDE-------DM 863 (985)
Q Consensus 794 -~~~~~lv~e~~~~g-sL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~-------~~ 863 (985)
....++|||++++. +|.+++... ....+...+..++.+++..+.-| |..||+|+|++++|||++. ++
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L---H~~Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM---HAAGINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCccCCCChhhEEEeccccCCCCCc
Confidence 23468999999886 899887542 22445667778999999999999 8999999999999999975 46
Q ss_pred cEEEecccCcee
Q 001988 864 VAHLSDFGMAKL 875 (985)
Q Consensus 864 ~~kl~DfGla~~ 875 (985)
.+.++||+.+..
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 899999998754
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.81 E-value=6.5e-09 Score=127.18 Aligned_cols=277 Identities=22% Similarity=0.219 Sum_probs=127.4
Q ss_pred CCceEEEcccccCCCccccccccccccceEeecccc--ccCCchhhhcCCCCCCEEEecCCcCcccCcccccCCCCCCEE
Q 001988 194 KQLQELHLGYNNLSGAIPKEIGNLTVLQRISLINNK--LHGEIPQEIGYLQNLDVLQLGFNNLTGVVPATIFNMSTLKEI 271 (985)
Q Consensus 194 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 271 (985)
...+...+-+|.+. .++....+ +.|+.|-+..|. +....++.|..++.|++|||++|.=-+.+|..++.+-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 44555555555554 33333222 245556666654 332333345556666666666655445566666655555555
Q ss_pred EccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccccCCCCccEEEccCcccccccCCcccCCCCCceEeccCCcc
Q 001988 272 FLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSITNASKLILLEMGSNSFSGFIPSAIGNLRNLKLFDIFFNNL 351 (985)
Q Consensus 272 ~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 351 (985)
+|++..++ .+|..+. .|..|.+||+..+.-. ..+|.....|.+|++|.+.....
T Consensus 601 ~L~~t~I~-~LP~~l~-~Lk~L~~Lnl~~~~~l------------------------~~~~~i~~~L~~Lr~L~l~~s~~ 654 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLG-NLKKLIYLNLEVTGRL------------------------ESIPGILLELQSLRVLRLPRSAL 654 (889)
T ss_pred cccCCCcc-ccchHHH-HHHhhheecccccccc------------------------ccccchhhhcccccEEEeecccc
Confidence 55555555 4444442 3444555555444433 33344444455555554443331
Q ss_pred cCCCCcccccccccccCcccEEEecCCCCCc-cCCCCccchhhcccceeccccccccccCCcCCCCCCccEEEccCCCCC
Q 001988 352 TSSTPELGFLSSLANCKKLRYLGLGGNPLDG-FLPSSIGNLSLSLERLNIAFCNISGNIPKAIGNLSNLIVLSLGGNNLS 430 (985)
Q Consensus 352 ~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 430 (985)
..-.. .+..+.++.+|+.+......... .-......+....+.+.+..+... ..+..+..+.+|+.|.+.++.+.
T Consensus 655 ~~~~~---~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 655 SNDKL---LLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred ccchh---hHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCc
Confidence 11000 11122333344444332222100 000111111112223333333322 34556777888888888888876
Q ss_pred CCCCccccccc------cccceecccccccCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeee
Q 001988 431 GSIPVTFGGLQ------KLQGLDLAFNKLAGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTF 503 (985)
Q Consensus 431 ~~~~~~~~~l~------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 503 (985)
.....++.... ++..+...+...- ..+...-..++|+.|++..+.....+.+....+..+..+-+..+.+.+
T Consensus 731 e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 731 EIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred hhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 44433322222 2222222222111 122223345778888887776655555555555555555555554443
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.7e-09 Score=85.29 Aligned_cols=59 Identities=36% Similarity=0.580 Sum_probs=28.7
Q ss_pred cccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEecCCCc
Q 001988 538 AVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDLSNNK 596 (985)
Q Consensus 538 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 596 (985)
+|+.|++++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444455555555555555544444445555555555555544
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=8e-09 Score=83.32 Aligned_cols=60 Identities=35% Similarity=0.541 Sum_probs=36.8
Q ss_pred CCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEEeecCCcc
Q 001988 466 RLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLL 525 (985)
Q Consensus 466 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 525 (985)
+|++|++++|+|+...+..|.++++|++|++++|+++.+.|.+|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666655555666666666666666666666666666666666666665553
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.74 E-value=5.4e-08 Score=99.33 Aligned_cols=135 Identities=24% Similarity=0.234 Sum_probs=100.4
Q ss_pred ccCCceeeccCceeEEEEEEcCCcEEEEEEeccCCc----------------------chHHHHHHHHHHHHhcCCC--C
Q 001988 728 FAENNIIGIGGFGSVYRARLEDGVEIAIKVFHPQCA----------------------STLKSFEAECEVIKNIRHR--N 783 (985)
Q Consensus 728 ~~~~~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~----------------------~~~~~~~~E~~il~~l~h~--n 783 (985)
...+..||-|--+.||.|....|.++|||.-+.... -.....++|.++|+++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 455788999999999999999999999997542210 0123468899999999644 6
Q ss_pred eeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCC
Q 001988 784 LVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDM 863 (985)
Q Consensus 784 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~ 863 (985)
+.+.+++ +...+||||++|-.|...- ++......++..|++-+... -..||||+|+++-||+++++|
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~---~~~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKA---YRRGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHH---HHcCccccCCchheEEEecCC
Confidence 6666665 3457999999886665431 12333444666666666666 578999999999999999999
Q ss_pred cEEEecccCcee
Q 001988 864 VAHLSDFGMAKL 875 (985)
Q Consensus 864 ~~kl~DfGla~~ 875 (985)
.++++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999965543
No 491
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.61 E-value=5.1e-09 Score=94.38 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=73.4
Q ss_pred cceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhcccccceeeeeecceeccchhhhhhcccccCeEec
Q 001988 513 KDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLEGLKSLQNISLAYNRLEGPIPESFGNMTSLESLDL 592 (985)
Q Consensus 513 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 592 (985)
..|+..++++|.+...++..-...+.++.|+|++|.|+ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|..||.
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 34455555555555444433334456777777777777 56777888888888888888877 56667777777888888
Q ss_pred CCCcccCCCCccccccccccccccccccccCCCCCC
Q 001988 593 SNNKISGSIPVSFEKLSYLKELNLSFNKLKGEIPRG 628 (985)
Q Consensus 593 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 628 (985)
.+|.+. .+|..+-.-......++.++++.+..|..
T Consensus 131 ~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 131 PENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred CCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 888776 44544333344455566777777776654
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.56 E-value=2.8e-09 Score=119.95 Aligned_cols=178 Identities=29% Similarity=0.329 Sum_probs=89.6
Q ss_pred CCcCCCCCCccEEEccCCCCCCCCCcccccc-ccccceecccccccCCchhhh----hh------ccCCCeEEccCCccc
Q 001988 410 PKAIGNLSNLIVLSLGGNNLSGSIPVTFGGL-QKLQGLDLAFNKLAGSIPDEI----CL------LSRLNELDLNGNKIS 478 (985)
Q Consensus 410 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~----~~------l~~L~~L~L~~N~l~ 478 (985)
|-.+..+..|++|.|.++.|+. ...+..+ ..|+.|.-+ |.+. .+-+.| +. -..|...+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~-Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLD-ALRHVFASCGGDISNSPVWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHH-HHHHHHHHhccccccchhhhhHhhhhcchhhHH
Confidence 4566778889999999888863 1112222 245555332 3322 111111 11 123556666666665
Q ss_pred cccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEEeecCCcccCCccccccCCCcccEEEccCCccCccCchhhc
Q 001988 479 GSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAIGNLKAVVGIDLSRNNLSGNIPTTLE 558 (985)
Q Consensus 479 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 558 (985)
.....+.-++.|+.|+|++|+++.+. .+..++.|+.||+++|.+..+.-.....+. |+.|.+++|.++.. ..+.
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHH
Confidence 34445555666677777777666542 455566666666666666544333333333 55555555555422 2344
Q ss_pred ccccceeeeeecceeccch-hhhhhcccccCeEecCCCcc
Q 001988 559 GLKSLQNISLAYNRLEGPI-PESFGNMTSLESLDLSNNKI 597 (985)
Q Consensus 559 ~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l 597 (985)
+|.+|+.||+++|-|.+.- -.-+..|..|..|+|.+|.+
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 4555555555555544321 11133344444444444444
No 493
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.55 E-value=5.3e-07 Score=92.88 Aligned_cols=107 Identities=22% Similarity=0.258 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhcCCC--CeeeEEeeeecC----CceEEEEeccCCC-ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 001988 766 LKSFEAECEVIKNIRHR--NLVKIISSCSND----DFKALVLEYMSNG-SLEDCLHSSNCALNIFCRLNIMIDIASALEY 838 (985)
Q Consensus 766 ~~~~~~E~~il~~l~h~--niv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~ 838 (985)
...+.+|...+.++... ..++.+++.+.. ...++|+|++++. +|.+++..... .+......++.++++.++-
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 34678899988888533 344566666543 2357999999884 89998886432 5566778899999999999
Q ss_pred HHhcCCCCeEeCCCCCCCEEEcCCC---cEEEecccCceec
Q 001988 839 LHFGHSTPIIHCDLKPSNVLLDEDM---VAHLSDFGMAKLL 876 (985)
Q Consensus 839 Lh~~h~~~ivHrDlk~~Nill~~~~---~~kl~DfGla~~~ 876 (985)
| |..||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 134 l---H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 L---HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred H---HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9 899999999999999999887 8999999987653
No 494
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.55 E-value=1.5e-08 Score=119.58 Aligned_cols=236 Identities=23% Similarity=0.225 Sum_probs=162.5
Q ss_pred HhcCccCCceeeccCceeEEEEEEc-CCcEEEEEEeccC---CcchHHHHHHHHHHHHhcCCCCeeeEEeeeecCCceEE
Q 001988 724 ATDNFAENNIIGIGGFGSVYRARLE-DGVEIAIKVFHPQ---CASTLKSFEAECEVIKNIRHRNLVKIISSCSNDDFKAL 799 (985)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~l 799 (985)
..+.+...+-+.+|+++.++.+.-. .|...++|..... .....+....+-.+.-...||-+++....+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4466777778889999999988643 3323333333211 11122233333333333456777766655555667789
Q ss_pred EEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC-
Q 001988 800 VLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG- 878 (985)
Q Consensus 800 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~- 878 (985)
|++|+.++++...++..+ ..+..........+..+.+|| |+..++|||++|.|.+...+++.++.|||......-
T Consensus 882 ~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L---~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESL---HSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhcc---ccchhhcccccccchhhcccCCcccCccccccccccc
Confidence 999999999999998765 334444445666788899999 888899999999999999999999999984332110
Q ss_pred -----C---------------C--------CcceecccccccccccccccccCccchhhhcccccccchhhhcccccccC
Q 001988 879 -----E---------------D--------ESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSG 930 (985)
Q Consensus 879 -----~---------------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~ 930 (985)
. . .........||+.|.|||...+.......| ||..|+.+++.+.+.....
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad-~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAAD-WWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcch-hhhhhhhhhhhhcCCCCCC
Confidence 0 0 001133456999999999998888877777 7999999999998876544
Q ss_pred cc--------------hhhhhHHHHHHHHHHHHHHccCCCCCCCCCHH
Q 001988 931 EE--------------KHFAAKEQCLLSIFSLALECTMESPEKRIDAK 964 (985)
Q Consensus 931 ~~--------------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ 964 (985)
.. ++...++....+..+++...+..+|.+|-.|.
T Consensus 1037 a~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 32 22233444567778888888888888887765
No 495
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.54 E-value=2.9e-07 Score=105.85 Aligned_cols=140 Identities=22% Similarity=0.296 Sum_probs=100.5
Q ss_pred ceeeccCceeEEEEEEcCCcEEEEEEeccCCcch----------------------------------------HHHHHH
Q 001988 732 NIIGIGGFGSVYRARLEDGVEIAIKVFHPQCAST----------------------------------------LKSFEA 771 (985)
Q Consensus 732 ~~ig~G~~g~V~~~~~~~~~~vAvK~~~~~~~~~----------------------------------------~~~~~~ 771 (985)
+.|+.++-|.||+|++++|++||||+.++..... +-.+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6799999999999999999999999987653110 012455
Q ss_pred HHHHHHhcC-----CCCeeeEEeeeecCCceEEEEeccCCCChHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHhcCCC
Q 001988 772 ECEVIKNIR-----HRNLVKIISSCSNDDFKALVLEYMSNGSLEDCLHSSNCALNIFCRLNIMIDIASA-LEYLHFGHST 845 (985)
Q Consensus 772 E~~il~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~-L~~Lh~~h~~ 845 (985)
|..-+.+++ .+.+.-..=|++..+...++|||++|-.+.+.........+ +..++..++++ +..+ -..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~~q~---~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFLRQL---LRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHHHHH---Hhc
Confidence 666665552 45554444455556677899999999888887433323344 33455555544 3333 458
Q ss_pred CeEeCCCCCCCEEEcCCCcEEEecccCceecc
Q 001988 846 PIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLS 877 (985)
Q Consensus 846 ~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~ 877 (985)
|+.|+|..|-||+++.+|++.+.|||+...++
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 99999999999999999999999999987764
No 496
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.52 E-value=1.9e-06 Score=94.88 Aligned_cols=208 Identities=16% Similarity=0.147 Sum_probs=142.0
Q ss_pred ceeEEEEEEc-CCcEEEEEEeccCCcchHHHHHHHHHHHHhcCCCCeeeEEeeeec----CCceEEEEeccCC-CChHHH
Q 001988 739 FGSVYRARLE-DGVEIAIKVFHPQCASTLKSFEAECEVIKNIRHRNLVKIISSCSN----DDFKALVLEYMSN-GSLEDC 812 (985)
Q Consensus 739 ~g~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~ 812 (985)
-.+.|++... ||..|++|+++.........-..-+++++++.|+|+|++.+++.. +...++||+|.|+ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 4568999854 899999999965433332233456788999999999999998863 3467899999987 477665
Q ss_pred hhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCcEEEecccCceeccC
Q 001988 813 LHSS--------------NCALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHLSDFGMAKLLSG 878 (985)
Q Consensus 813 l~~~--------------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~~kl~DfGla~~~~~ 878 (985)
.... +...++...|.++.|+..||.++ |+.|..-+-+.+.+|+++.+.+++|+.-|..-.+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sI---HssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSI---HSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHH---HhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4321 23456788999999999999999 889999999999999999999999998887655432
Q ss_pred CCCcceecccccccccccccccccCccchhhhcccccccchhhhcccccccCcchh------hhhHHHHHHHHHHHHHHc
Q 001988 879 EDESTMRTQTLATIGYMAPDEIFVGELSLKRWVNDLLPVSLVEVVDKSLLSGEEKH------FAAKEQCLLSIFSLALEC 952 (985)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~~~~g~~~~~i~~~~~~~~~~~~------~~~~~~~~~~l~~l~~~c 952 (985)
++. +| +... -+.|. -.+|.+++.+.++..-+....- .........++++++.-.
T Consensus 446 d~~--------------~~--le~~---Qq~D~-~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~yS~D~rn~v~yl 505 (655)
T KOG3741|consen 446 DPT--------------EP--LESQ---QQNDL-RDLGLLLLALATGTENSNRTDSTQSSHLTRITTTYSTDLRNVVEYL 505 (655)
T ss_pred CCC--------------cc--hhHH---hhhhH-HHHHHHHHHHhhcccccccccchHHHHHHHhhhhhhHHHHHHHHHH
Confidence 221 11 1111 12233 5567778887777543222111 111223556677777777
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 001988 953 TMESPEKRIDAKDTITRL 970 (985)
Q Consensus 953 l~~~P~~RPt~~ev~~~L 970 (985)
....+++ -+..+++.++
T Consensus 506 ~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 506 ESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HhcCccc-ccHHHHHHHH
Confidence 7777775 4566655544
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.50 E-value=3.2e-09 Score=119.48 Aligned_cols=179 Identities=31% Similarity=0.350 Sum_probs=124.4
Q ss_pred CCCccchhhcccceeccccccccccCCcCCCC-CCccEEEccCCCCC----------CCCCccccccccccceecccccc
Q 001988 385 PSSIGNLSLSLERLNIAFCNISGNIPKAIGNL-SNLIVLSLGGNNLS----------GSIPVTFGGLQKLQGLDLAFNKL 453 (985)
Q Consensus 385 p~~~~~l~~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~----------~~~~~~~~~l~~L~~L~Ls~N~l 453 (985)
|-.+..+. +|+.|.|.+|.|.. ...+..+ ..|+.|.- +|.+. |.+-.++ ...+|.+.+.++|++
T Consensus 102 pi~ifpF~-sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFR-SLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSP-VWNKLATASFSYNRL 176 (1096)
T ss_pred Cceecccc-ceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccch-hhhhHhhhhcchhhH
Confidence 54555665 79999999998873 1112111 23444432 22221 1111111 134788889999999
Q ss_pred cCCchhhhhhccCCCeEEccCCccccccCCCCcCcCcCceEeeccceeeeecCCCccCccceeEEeecCCcccCCccccc
Q 001988 454 AGSIPDEICLLSRLNELDLNGNKISGSISSCLGNLTSLQYLNLGSNRFTFVIPSTFWNLKDILSFDISSNLLDGPISLAI 533 (985)
Q Consensus 454 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 533 (985)
. .+..++.-++.|+.|+|++|+++... .+..++.|++|||+.|.++.+.--...+.. |..|.+++|.++... .+
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~--gi 250 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR--GI 250 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh--hH
Confidence 8 67778888899999999999998643 788889999999999999864333333333 899999999887643 46
Q ss_pred cCCCcccEEEccCCccCccCc-hhhcccccceeeeeecceec
Q 001988 534 GNLKAVVGIDLSRNNLSGNIP-TTLEGLKSLQNISLAYNRLE 574 (985)
Q Consensus 534 ~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 574 (985)
.++.+|+.||+|.|-|.+.-. ..++.|..|+.|+|.+|.+-
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 788899999999998876422 34566788999999999886
No 498
>PRK09902 hypothetical protein; Provisional
Probab=98.48 E-value=2.4e-06 Score=85.73 Aligned_cols=138 Identities=17% Similarity=0.130 Sum_probs=102.2
Q ss_pred eeccCceeEEEEEEcCCcEEEEEEeccCC------cchHHHHHHHHHHHHhcCC--CCeeeEEeeeec--C--CceEEEE
Q 001988 734 IGIGGFGSVYRARLEDGVEIAIKVFHPQC------ASTLKSFEAECEVIKNIRH--RNLVKIISSCSN--D--DFKALVL 801 (985)
Q Consensus 734 ig~G~~g~V~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~il~~l~h--~niv~l~~~~~~--~--~~~~lv~ 801 (985)
-|+||-+.|++.... |..+=+|+-.... +-....|.+|...++++.. -.+.+...+... + -..+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 477999999998875 4468888754111 2245689999999999853 224444422211 1 2357999
Q ss_pred eccCC-CChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEcCCCc--EEEecccCcee
Q 001988 802 EYMSN-GSLEDCLHSSN-CALNIFCRLNIMIDIASALEYLHFGHSTPIIHCDLKPSNVLLDEDMV--AHLSDFGMAKL 875 (985)
Q Consensus 802 e~~~~-gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivHrDlk~~Nill~~~~~--~kl~DfGla~~ 875 (985)
|-++| -+|.+++.... .+.+...+..+..+++.+++-| |..|+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~L---H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKM---HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98754 48999886542 2457778889999999999999 8999999999999999986666 99999986654
No 499
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.42 E-value=1.3e-08 Score=102.14 Aligned_cols=134 Identities=22% Similarity=0.207 Sum_probs=80.6
Q ss_pred hhhcCCCCCCEEEecCCcCcccCccc----ccCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEecCccCCCcCCccc
Q 001988 236 QEIGYLQNLDVLQLGFNNLTGVVPAT----IFNMSTLKEIFLYNNSLSGSLPSRIDLALPNLEFLNLGINSFSGTIPSSI 311 (985)
Q Consensus 236 ~~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 311 (985)
..+.++++|+..+||.|.+....|.. +...+.|++|.|+||.+...-...+...+-. |..|+ -.
T Consensus 86 ~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~-----la~nK-------Ka 153 (388)
T COG5238 86 KALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFH-----LAYNK-------KA 153 (388)
T ss_pred HHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHH-----HHHHh-------hh
Confidence 34566788888888888887655544 3456778888888887752222222211111 12221 23
Q ss_pred cCCCCccEEEccCcccccccCC----cccCCCCCceEeccCCcccCCCCcccccccccccCcccEEEecCCCCC
Q 001988 312 TNASKLILLEMGSNSFSGFIPS----AIGNLRNLKLFDIFFNNLTSSTPELGFLSSLANCKKLRYLGLGGNPLD 381 (985)
Q Consensus 312 ~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 381 (985)
.+-+.|++.....|++...... .+..-.+|+.+.+..|.|.......-.+-.+..+.+|+.|||.+|.++
T Consensus 154 a~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 154 ADKPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred ccCCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 4556788888888887632211 122235788888888887644322222334567788888888888776
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.36 E-value=2.2e-08 Score=90.37 Aligned_cols=108 Identities=25% Similarity=0.324 Sum_probs=62.2
Q ss_pred ceecccCCcCCCCCCcccccC---CCCcEEEccCcccCCCCccccccCCccceeeeccccccCCCChhHhhhccccceec
Q 001988 100 KSLDLSHNKLSSNIPSSIFTM---STLKVLYLMDNQLSGSLSSFTFNTSSILDIRLSKNKLSGKLPENICNHLRYLKHLF 176 (985)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ls~n~l~g~lp~~~~~~l~~L~~L~ 176 (985)
..+||+++++- .+++....+ ..|+..+|++|.+....+.+....+.+++|+|++|.++ .+|.++ ..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~-Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEEL-AAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHH-hhhHHhhhcc
Confidence 34444444442 233333322 33444455566555544455555555555555555555 677773 5677777777
Q ss_pred ccCccccccCCcccCCCCCceEEEcccccCCCcccc
Q 001988 177 LRENMFYGKIPSSLSKCKQLQELHLGYNNLSGAIPK 212 (985)
Q Consensus 177 L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 212 (985)
++.|.+. ..|..+..|.+|-.|+..+|.+. .+|-
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 7777776 56666666777777777777666 4443
Done!