Query 001990
Match_columns 985
No_of_seqs 808 out of 5576
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 14:01:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001990.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001990hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2040 Glycine dehydrogenase 100.0 2E-175 4E-180 1437.5 64.6 884 83-983 37-929 (1001)
2 PRK12566 glycine dehydrogenase 100.0 7E-169 1E-173 1504.8 85.9 868 92-977 7-879 (954)
3 TIGR00461 gcvP glycine dehydro 100.0 9E-165 2E-169 1481.7 90.2 866 101-977 1-870 (939)
4 PLN02414 glycine dehydrogenase 100.0 9E-160 2E-164 1458.1 92.4 881 93-977 30-910 (993)
5 PRK05367 glycine dehydrogenase 100.0 4E-155 8E-160 1428.1 88.5 867 93-977 5-878 (954)
6 COG0403 GcvP Glycine cleavage 100.0 6E-108 1E-112 882.9 41.9 435 93-530 2-447 (450)
7 PF02347 GDC-P: Glycine cleava 100.0 6.5E-99 1E-103 843.7 37.9 425 100-527 1-429 (429)
8 COG1003 GcvP Glycine cleavage 100.0 3.8E-79 8.2E-84 656.7 37.5 414 557-978 29-451 (496)
9 PF02347 GDC-P: Glycine cleava 100.0 8.6E-58 1.9E-62 512.2 30.8 403 514-968 5-429 (429)
10 PRK00451 glycine dehydrogenase 100.0 1.9E-55 4E-60 517.6 43.2 424 99-529 1-444 (447)
11 TIGR00461 gcvP glycine dehydro 100.0 3.7E-54 8E-59 521.3 39.1 403 105-529 413-863 (939)
12 PRK04366 glycine dehydrogenase 100.0 8.9E-53 1.9E-57 495.5 37.4 381 126-530 30-445 (481)
13 COG0403 GcvP Glycine cleavage 100.0 1E-50 2.2E-55 438.9 32.0 408 516-971 15-447 (450)
14 PRK12566 glycine dehydrogenase 100.0 1.2E-49 2.7E-54 478.1 35.6 393 105-530 426-873 (954)
15 PRK04366 glycine dehydrogenase 100.0 5.9E-49 1.3E-53 463.0 39.9 410 546-977 32-451 (481)
16 PRK05367 glycine dehydrogenase 100.0 1.1E-46 2.3E-51 465.8 40.2 403 101-529 420-871 (954)
17 PLN02414 glycine dehydrogenase 100.0 1.7E-44 3.6E-49 443.4 39.2 402 102-529 448-903 (993)
18 COG1003 GcvP Glycine cleavage 100.0 4.2E-42 9.1E-47 370.7 31.6 389 118-530 19-444 (496)
19 PRK00451 glycine dehydrogenase 100.0 2.1E-37 4.5E-42 364.5 41.3 416 514-972 6-446 (447)
20 cd00613 GDC-P Glycine cleavage 100.0 1.7E-35 3.8E-40 343.3 38.2 375 150-527 1-398 (398)
21 KOG2040 Glycine dehydrogenase 100.0 1.7E-36 3.7E-41 336.5 25.2 398 515-969 59-478 (1001)
22 cd00613 GDC-P Glycine cleavage 100.0 3.2E-33 6.9E-38 324.3 35.1 374 570-968 1-398 (398)
23 COG0520 csdA Selenocysteine ly 100.0 1.5E-32 3.2E-37 314.1 36.4 359 151-529 6-401 (405)
24 COG1104 NifS Cysteine sulfinat 100.0 8.3E-31 1.8E-35 288.2 28.8 349 591-979 2-382 (386)
25 COG0520 csdA Selenocysteine ly 100.0 3.5E-29 7.5E-34 286.4 32.6 316 626-973 60-404 (405)
26 PRK09295 bifunctional cysteine 100.0 6.6E-27 1.4E-31 272.0 34.2 359 151-529 6-400 (406)
27 PRK13520 L-tyrosine decarboxyl 100.0 3.5E-26 7.6E-31 262.8 31.9 356 567-973 1-370 (371)
28 PRK10874 cysteine sulfinate de 100.0 1.1E-25 2.3E-30 261.6 35.0 360 148-529 4-394 (401)
29 PF00266 Aminotran_5: Aminotra 100.0 1.7E-26 3.7E-31 265.4 27.0 328 179-523 10-371 (371)
30 PLN02855 Bifunctional selenocy 99.9 1E-25 2.2E-30 263.5 33.5 310 206-529 71-414 (424)
31 TIGR03392 FeS_syn_CsdA cystein 99.9 1.6E-25 3.4E-30 260.0 34.4 357 151-529 4-391 (398)
32 TIGR01788 Glu-decarb-GAD gluta 99.9 1.6E-24 3.5E-29 250.3 37.7 379 560-975 16-430 (431)
33 PLN03032 serine decarboxylase; 99.9 8.9E-25 1.9E-29 247.3 33.1 295 628-971 62-373 (374)
34 PRK02769 histidine decarboxyla 99.9 1.7E-24 3.7E-29 246.9 32.5 299 629-975 62-373 (380)
35 TIGR01979 sufS cysteine desulf 99.9 2.8E-24 6.1E-29 249.9 34.2 308 207-529 58-397 (403)
36 COG1104 NifS Cysteine sulfinat 99.9 3.4E-24 7.4E-29 236.1 32.3 292 207-530 40-374 (386)
37 TIGR01814 kynureninase kynuren 99.9 2.1E-24 4.6E-29 250.9 31.0 303 211-529 71-403 (406)
38 PLN02651 cysteine desulfurase 99.9 6.2E-24 1.4E-28 243.5 31.6 283 207-521 39-364 (364)
39 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.2E-23 2.5E-28 244.2 33.0 297 206-527 55-397 (397)
40 PRK09295 bifunctional cysteine 99.9 9.4E-24 2E-28 245.6 32.2 313 628-973 63-403 (406)
41 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.7E-23 3.7E-28 240.7 33.7 360 569-971 1-373 (373)
42 PLN02263 serine decarboxylase 99.9 2.2E-23 4.7E-28 238.8 33.8 299 629-974 130-443 (470)
43 PRK10874 cysteine sulfinate de 99.9 1.1E-23 2.3E-28 244.8 31.9 313 628-974 59-398 (401)
44 TIGR03402 FeS_nifS cysteine de 99.9 2.2E-23 4.7E-28 240.4 33.7 292 206-529 37-368 (379)
45 PLN02855 Bifunctional selenocy 99.9 2E-23 4.3E-28 244.3 32.7 316 631-978 75-422 (424)
46 TIGR03392 FeS_syn_CsdA cystein 99.9 1.7E-23 3.7E-28 242.9 31.8 311 630-974 58-395 (398)
47 PLN02590 probable tyrosine dec 99.9 3.6E-23 7.9E-28 243.1 32.3 384 565-978 105-536 (539)
48 cd06453 SufS_like Cysteine des 99.9 8.2E-23 1.8E-27 235.1 34.7 308 205-527 37-373 (373)
49 KOG1383 Glutamate decarboxylas 99.9 4.1E-23 8.9E-28 226.4 30.0 373 559-978 54-450 (491)
50 TIGR01979 sufS cysteine desulf 99.9 4.1E-23 8.9E-28 240.1 31.9 314 630-975 60-402 (403)
51 TIGR01977 am_tr_V_EF2568 cyste 99.9 9.1E-23 2E-27 234.9 33.8 302 207-529 40-375 (376)
52 TIGR03402 FeS_nifS cysteine de 99.9 1.1E-22 2.3E-27 234.6 33.9 310 629-977 39-375 (379)
53 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.4E-23 1.2E-27 238.6 31.4 311 627-968 55-397 (397)
54 PLN02651 cysteine desulfurase 99.9 4.2E-23 9.1E-28 236.6 29.9 295 630-959 41-364 (364)
55 cd06453 SufS_like Cysteine des 99.9 1E-22 2.2E-27 234.2 31.3 306 628-968 39-373 (373)
56 PF00266 Aminotran_5: Aminotra 99.9 4.8E-23 1E-27 236.8 28.4 304 628-964 39-371 (371)
57 PRK13520 L-tyrosine decarboxyl 99.9 2.7E-22 5.9E-27 230.5 34.1 346 148-529 2-367 (371)
58 COG0076 GadB Glutamate decarbo 99.9 8.1E-23 1.7E-27 236.5 28.4 343 560-937 32-403 (460)
59 PLN02880 tyrosine decarboxylas 99.9 2.9E-22 6.2E-27 235.8 31.9 386 565-977 57-487 (490)
60 cd06451 AGAT_like Alanine-glyo 99.9 2E-22 4.3E-27 230.4 29.7 313 629-972 29-355 (356)
61 COG0075 Serine-pyruvate aminot 99.9 5.5E-22 1.2E-26 220.6 30.3 325 170-529 8-359 (383)
62 PRK02948 cysteine desulfurase; 99.9 8.9E-22 1.9E-26 227.2 33.2 307 630-976 41-376 (381)
63 TIGR02006 IscS cysteine desulf 99.9 7E-22 1.5E-26 229.5 32.5 308 631-976 46-379 (402)
64 PRK13580 serine hydroxymethylt 99.9 3.7E-22 8.1E-27 229.1 26.7 302 632-974 95-445 (493)
65 cd06450 DOPA_deC_like DOPA dec 99.9 2.7E-22 5.9E-27 228.2 25.6 292 627-970 33-344 (345)
66 PLN02724 Molybdenum cofactor s 99.9 1.1E-21 2.4E-26 244.6 32.6 350 156-530 28-485 (805)
67 TIGR03403 nifS_epsilon cystein 99.9 2.7E-21 5.9E-26 223.2 33.4 308 633-977 43-378 (382)
68 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.4E-21 2.9E-26 225.2 30.4 307 629-970 41-375 (376)
69 TIGR01814 kynureninase kynuren 99.9 9.6E-22 2.1E-26 228.7 29.2 304 633-972 72-405 (406)
70 PTZ00094 serine hydroxymethylt 99.9 1.9E-21 4.2E-26 228.6 30.3 302 631-974 78-408 (452)
71 TIGR02006 IscS cysteine desulf 99.9 5.5E-21 1.2E-25 222.0 33.6 288 210-529 46-373 (402)
72 TIGR03403 nifS_epsilon cystein 99.9 5.2E-21 1.1E-25 220.9 32.9 288 210-529 41-371 (382)
73 TIGR03799 NOD_PanD_pyr putativ 99.9 1.7E-20 3.7E-25 221.2 36.0 376 560-966 61-517 (522)
74 PF00282 Pyridoxal_deC: Pyrido 99.9 1.3E-21 2.8E-26 223.0 25.1 313 560-888 11-353 (373)
75 PRK02948 cysteine desulfurase; 99.9 9.5E-21 2.1E-25 218.6 32.3 292 205-529 37-370 (381)
76 PLN02409 serine--glyoxylate am 99.9 2.5E-21 5.4E-26 224.5 27.2 318 628-976 38-374 (401)
77 COG4992 ArgD Ornithine/acetylo 99.9 4.1E-21 9E-26 211.2 26.5 334 568-976 36-400 (404)
78 TIGR02326 transamin_PhnW 2-ami 99.9 9.7E-21 2.1E-25 217.1 30.5 317 629-972 32-360 (363)
79 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 9.2E-21 2E-25 217.6 30.3 306 632-974 51-368 (370)
80 PLN02409 serine--glyoxylate am 99.9 6.6E-21 1.4E-25 221.0 29.3 323 170-529 12-368 (401)
81 COG0156 BioF 7-keto-8-aminopel 99.9 1.5E-21 3.3E-26 219.3 23.0 316 164-529 43-386 (388)
82 PRK03080 phosphoserine aminotr 99.9 6.7E-21 1.5E-25 219.1 28.9 297 210-529 47-369 (378)
83 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4.7E-20 1E-24 212.1 35.4 343 149-529 1-372 (373)
84 PRK14012 cysteine desulfurase; 99.9 1.9E-20 4.1E-25 217.7 31.9 310 632-977 49-382 (404)
85 KOG1549 Cysteine desulfurase N 99.9 3.1E-21 6.7E-26 213.2 23.8 172 629-813 82-257 (428)
86 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.1E-20 4.5E-25 216.0 30.3 307 633-975 64-382 (387)
87 PRK13479 2-aminoethylphosphona 99.9 3.4E-20 7.4E-25 213.0 31.2 318 630-975 35-364 (368)
88 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.2E-20 7E-25 211.8 28.8 314 630-971 29-354 (355)
89 PLN02271 serine hydroxymethylt 99.9 4.8E-20 1.1E-24 211.9 28.3 311 632-973 194-539 (586)
90 cd06451 AGAT_like Alanine-glyo 99.9 5.1E-20 1.1E-24 210.5 28.0 315 179-529 9-353 (356)
91 COG0112 GlyA Glycine/serine hy 99.9 3E-20 6.6E-25 201.1 24.3 292 636-973 76-389 (413)
92 PRK02769 histidine decarboxyla 99.9 2.8E-19 6E-24 204.2 31.6 283 207-530 61-369 (380)
93 COG0075 Serine-pyruvate aminot 99.9 3.5E-19 7.5E-24 198.3 29.6 318 629-981 35-370 (383)
94 PRK14012 cysteine desulfurase; 99.8 4.3E-19 9.3E-24 206.4 31.4 290 210-529 48-375 (404)
95 TIGR01366 serC_3 phosphoserine 99.8 2.2E-19 4.8E-24 204.9 28.2 327 172-529 8-356 (361)
96 TIGR01788 Glu-decarb-GAD gluta 99.8 1.3E-18 2.8E-23 201.4 33.8 349 139-530 15-426 (431)
97 TIGR02326 transamin_PhnW 2-ami 99.8 4.2E-19 9.1E-24 203.5 29.3 322 171-529 7-358 (363)
98 TIGR01822 2am3keto_CoA 2-amino 99.8 3.8E-19 8.2E-24 206.2 26.1 297 627-975 78-390 (393)
99 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 1E-18 2.2E-23 200.2 29.2 303 634-972 46-360 (361)
100 COG3844 Kynureninase [Amino ac 99.8 5.9E-19 1.3E-23 185.1 24.5 306 208-529 73-398 (407)
101 PRK13479 2-aminoethylphosphona 99.8 1.8E-18 3.9E-23 198.7 31.3 320 170-529 8-359 (368)
102 TIGR03235 DNA_S_dndA cysteine 99.8 1.5E-18 3.3E-23 198.1 30.4 263 206-500 37-319 (353)
103 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 2.1E-18 4.6E-23 196.8 31.3 318 177-529 7-353 (355)
104 PRK05937 8-amino-7-oxononanoat 99.8 1.2E-18 2.6E-23 200.2 29.1 294 625-979 49-355 (370)
105 PLN02724 Molybdenum cofactor s 99.8 4.5E-19 9.7E-24 221.4 27.5 320 627-972 73-486 (805)
106 PRK07179 hypothetical protein; 99.8 1.1E-18 2.3E-23 203.3 27.7 287 633-975 100-399 (407)
107 TIGR03531 selenium_SpcS O-phos 99.8 1.9E-18 4.2E-23 198.8 29.2 359 560-971 29-443 (444)
108 PRK13034 serine hydroxymethylt 99.8 1.7E-18 3.7E-23 201.2 29.1 297 632-973 70-391 (416)
109 TIGR01822 2am3keto_CoA 2-amino 99.8 1.5E-18 3.3E-23 201.1 28.0 281 205-529 77-385 (393)
110 PTZ00094 serine hydroxymethylt 99.8 9.5E-19 2.1E-23 205.8 26.3 284 209-529 77-404 (452)
111 cd00378 SHMT Serine-glycine hy 99.8 2.1E-18 4.4E-23 200.7 28.2 292 637-974 70-385 (402)
112 TIGR03235 DNA_S_dndA cysteine 99.8 2.2E-18 4.7E-23 196.9 27.9 271 630-935 40-319 (353)
113 PLN03032 serine decarboxylase; 99.8 8.3E-18 1.8E-22 190.7 31.8 282 206-529 61-372 (374)
114 TIGR01821 5aminolev_synth 5-am 99.8 1.3E-18 2.9E-23 202.2 26.0 296 629-975 87-397 (402)
115 COG0156 BioF 7-keto-8-aminopel 99.8 1.2E-18 2.6E-23 196.0 24.3 294 625-971 77-387 (388)
116 PRK03080 phosphoserine aminotr 99.8 1.2E-18 2.6E-23 200.4 24.8 309 631-977 47-376 (378)
117 PLN02955 8-amino-7-oxononanoat 99.8 2E-18 4.3E-23 198.5 25.8 311 164-529 106-457 (476)
118 TIGR01437 selA_rel uncharacter 99.8 2.3E-18 5E-23 196.8 25.7 296 632-971 45-362 (363)
119 PLN03226 serine hydroxymethylt 99.8 6.2E-18 1.3E-22 198.3 29.9 303 637-974 85-419 (475)
120 PLN02955 8-amino-7-oxononanoat 99.8 2.5E-18 5.4E-23 197.7 25.8 300 627-976 142-463 (476)
121 KOG1359 Glycine C-acetyltransf 99.8 4.6E-19 9.9E-24 182.8 17.0 310 164-529 71-408 (417)
122 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1.2E-17 2.6E-22 193.0 31.1 284 207-529 59-377 (387)
123 cd00616 AHBA_syn 3-amino-5-hyd 99.8 3E-18 6.4E-23 195.5 25.5 301 633-969 19-352 (352)
124 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.9E-17 4E-22 190.3 31.9 285 205-529 45-364 (370)
125 PRK00011 glyA serine hydroxyme 99.8 7E-18 1.5E-22 197.1 28.0 292 637-974 76-389 (416)
126 COG0436 Aspartate/tyrosine/aro 99.8 8E-18 1.7E-22 193.3 27.7 332 590-974 29-391 (393)
127 PRK13392 5-aminolevulinate syn 99.8 4.5E-18 9.7E-23 198.3 26.0 291 633-974 92-397 (410)
128 PRK13393 5-aminolevulinate syn 99.8 5.9E-18 1.3E-22 196.9 26.5 292 632-974 90-396 (406)
129 cd00611 PSAT_like Phosphoserin 99.8 2.9E-18 6.3E-23 195.7 23.1 314 177-529 7-352 (355)
130 PRK09064 5-aminolevulinate syn 99.8 6E-18 1.3E-22 197.0 26.2 294 631-975 90-398 (407)
131 PLN02483 serine palmitoyltrans 99.8 8.8E-18 1.9E-22 198.7 27.5 296 631-976 145-468 (489)
132 PF00464 SHMT: Serine hydroxym 99.8 2.6E-18 5.6E-23 193.7 21.7 281 636-959 70-393 (399)
133 PRK05355 3-phosphoserine/phosp 99.8 6.9E-18 1.5E-22 192.3 25.0 281 210-529 47-354 (360)
134 cd06454 KBL_like KBL_like; thi 99.8 6.1E-18 1.3E-22 192.6 24.6 289 631-971 45-348 (349)
135 PRK05937 8-amino-7-oxononanoat 99.8 1E-17 2.2E-22 192.5 26.4 316 165-529 9-346 (370)
136 PRK15029 arginine decarboxylas 99.8 1E-17 2.2E-22 202.4 26.8 304 633-974 206-604 (755)
137 KOG1549 Cysteine desulfurase N 99.8 1.2E-17 2.6E-22 185.0 25.0 321 170-529 46-414 (428)
138 TIGR01364 serC_1 phosphoserine 99.8 1.5E-17 3.2E-22 188.7 26.1 282 210-529 36-344 (349)
139 COG0160 GabT 4-aminobutyrate a 99.8 4.6E-17 9.9E-22 184.9 29.7 348 568-975 50-446 (447)
140 TIGR03246 arg_catab_astC succi 99.8 3.8E-17 8.2E-22 189.4 29.6 290 633-974 78-395 (397)
141 PLN03227 serine palmitoyltrans 99.8 1.8E-17 3.9E-22 191.3 26.6 310 164-530 2-379 (392)
142 PLN02721 threonine aldolase 99.8 1.4E-17 3.1E-22 190.0 25.1 292 634-973 42-351 (353)
143 cd06502 TA_like Low-specificit 99.8 5.1E-18 1.1E-22 192.4 21.1 288 633-970 33-337 (338)
144 TIGR01821 5aminolev_synth 5-am 99.8 1.1E-17 2.4E-22 194.4 24.3 313 165-529 50-392 (402)
145 PRK04073 rocD ornithine--oxo-a 99.8 3.4E-17 7.3E-22 189.9 28.1 287 634-972 84-395 (396)
146 TIGR03811 tyr_de_CO2_Ent tyros 99.8 5.8E-17 1.3E-21 192.6 29.9 303 569-888 61-474 (608)
147 cd00609 AAT_like Aspartate ami 99.8 3.2E-17 7E-22 186.1 26.0 294 628-969 36-349 (350)
148 PRK08114 cystathionine beta-ly 99.8 6.9E-17 1.5E-21 184.3 28.5 211 215-468 66-284 (395)
149 PRK07179 hypothetical protein; 99.8 2.3E-17 4.9E-22 192.1 25.2 270 211-529 99-394 (407)
150 PRK06939 2-amino-3-ketobutyrat 99.8 3.5E-17 7.7E-22 189.8 26.7 296 627-974 82-393 (397)
151 KOG1402 Ornithine aminotransfe 99.8 2.3E-17 5.1E-22 173.1 21.9 333 568-972 53-425 (427)
152 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 9.6E-18 2.1E-22 189.8 20.6 286 633-956 67-416 (417)
153 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 7.1E-18 1.5E-22 190.9 19.3 266 211-518 66-416 (417)
154 PLN03227 serine palmitoyltrans 99.8 6.9E-17 1.5E-21 186.5 27.4 301 633-976 44-384 (392)
155 KOG2862 Alanine-glyoxylate ami 99.8 1.9E-16 4E-21 165.5 27.6 324 170-529 20-378 (385)
156 PRK06108 aspartate aminotransf 99.8 1E-16 2.3E-21 185.0 28.5 300 627-972 60-380 (382)
157 PRK05958 8-amino-7-oxononanoat 99.8 5.8E-17 1.3E-21 187.2 26.3 290 629-971 81-384 (385)
158 PLN02483 serine palmitoyltrans 99.8 1.5E-16 3.3E-21 188.1 30.0 316 164-529 104-462 (489)
159 TIGR01825 gly_Cac_T_rel pyrido 99.8 8.6E-17 1.9E-21 186.0 27.0 295 627-974 73-381 (385)
160 PRK00854 rocD ornithine--oxo-a 99.8 1.7E-16 3.6E-21 184.6 29.4 289 633-972 84-399 (401)
161 TIGR01141 hisC histidinol-phos 99.8 2.3E-17 5E-22 187.9 21.7 280 635-969 57-346 (346)
162 PRK03244 argD acetylornithine 99.8 1.3E-16 2.8E-21 185.4 28.3 282 635-976 88-396 (398)
163 cd06450 DOPA_deC_like DOPA dec 99.8 6.8E-17 1.5E-21 183.8 24.9 264 205-529 32-344 (345)
164 PRK05355 3-phosphoserine/phosp 99.8 2.5E-17 5.5E-22 187.7 20.9 299 630-973 46-357 (360)
165 PRK13392 5-aminolevulinate syn 99.8 7.9E-17 1.7E-21 187.8 25.3 312 166-529 52-393 (410)
166 PLN02822 serine palmitoyltrans 99.8 1.9E-16 4.2E-21 186.9 28.8 300 628-976 150-479 (481)
167 TIGR00858 bioF 8-amino-7-oxono 99.8 1.1E-16 2.4E-21 182.9 25.4 285 632-969 61-360 (360)
168 COG0076 GadB Glutamate decarbo 99.8 2.3E-16 5E-21 183.0 28.0 328 139-502 31-403 (460)
169 PRK06225 aspartate aminotransf 99.8 2.8E-16 6.1E-21 181.4 28.7 297 634-977 68-379 (380)
170 PRK13393 5-aminolevulinate syn 99.8 8.4E-17 1.8E-21 187.3 24.2 313 165-529 50-392 (406)
171 PRK05964 adenosylmethionine--8 99.8 1.6E-16 3.5E-21 185.6 26.6 302 634-974 87-422 (423)
172 PRK13578 ornithine decarboxyla 99.8 1.2E-16 2.6E-21 191.1 25.8 309 633-975 175-566 (720)
173 cd06454 KBL_like KBL_like; thi 99.7 2.4E-16 5.1E-21 179.6 27.2 276 207-529 42-347 (349)
174 PRK09064 5-aminolevulinate syn 99.7 1.1E-16 2.4E-21 186.4 24.6 312 165-529 51-393 (407)
175 TIGR03372 putres_am_tran putre 99.7 2.7E-16 5.9E-21 182.8 27.5 286 634-971 119-441 (442)
176 PRK13034 serine hydroxymethylt 99.7 3.7E-16 8E-21 181.8 28.1 284 204-529 64-388 (416)
177 PRK15029 arginine decarboxylas 99.7 1.2E-16 2.5E-21 193.2 24.6 279 211-529 205-600 (755)
178 PRK05957 aspartate aminotransf 99.7 5E-16 1.1E-20 179.7 28.9 303 627-974 64-385 (389)
179 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 1.2E-15 2.7E-20 174.7 31.8 280 211-529 44-358 (361)
180 PRK12381 bifunctional succinyl 99.7 6.3E-16 1.4E-20 179.7 28.7 297 634-979 83-404 (406)
181 PRK05764 aspartate aminotransf 99.7 1.1E-15 2.3E-20 177.3 30.4 306 628-974 68-391 (393)
182 PLN02624 ornithine-delta-amino 99.7 8.7E-16 1.9E-20 181.2 29.9 296 634-974 119-444 (474)
183 PRK00950 histidinol-phosphate 99.7 1.3E-16 2.8E-21 182.9 22.3 281 635-972 72-360 (361)
184 PRK09028 cystathionine beta-ly 99.7 8.2E-16 1.8E-20 176.0 28.5 271 215-528 65-386 (394)
185 TIGR01324 cysta_beta_ly_B cyst 99.7 4.7E-16 1E-20 178.0 26.3 211 214-467 53-269 (377)
186 PRK07678 aminotransferase; Val 99.7 7.2E-16 1.6E-20 180.8 28.2 312 634-975 91-450 (451)
187 PRK08064 cystathionine beta-ly 99.7 5E-16 1.1E-20 179.1 26.4 275 212-530 55-383 (390)
188 cd00615 Orn_deC_like Ornithine 99.7 4.9E-17 1.1E-21 180.7 17.4 166 633-814 60-236 (294)
189 TIGR01366 serC_3 phosphoserine 99.7 2.2E-16 4.8E-21 180.3 23.0 302 630-974 39-360 (361)
190 TIGR01364 serC_1 phosphoserine 99.7 2.1E-16 4.5E-21 179.3 22.6 295 630-973 35-347 (349)
191 PRK15400 lysine decarboxylase 99.7 4.5E-16 9.8E-21 186.1 26.1 301 633-975 196-560 (714)
192 PRK07324 transaminase; Validat 99.7 9.6E-16 2.1E-20 176.3 28.0 291 635-973 65-369 (373)
193 PRK06767 methionine gamma-lyas 99.7 6.1E-16 1.3E-20 178.4 26.4 273 214-528 64-384 (386)
194 PRK11522 putrescine--2-oxoglut 99.7 7.4E-16 1.6E-20 180.4 27.0 294 633-977 125-454 (459)
195 cd00614 CGS_like CGS_like: Cys 99.7 1E-15 2.3E-20 175.6 27.7 214 212-468 41-261 (369)
196 PRK03715 argD acetylornithine 99.7 9E-16 1.9E-20 177.2 27.2 289 633-975 79-394 (395)
197 PRK05968 hypothetical protein; 99.7 4.2E-16 9.1E-21 179.7 24.4 274 213-529 65-386 (389)
198 PRK07682 hypothetical protein; 99.7 5.8E-16 1.3E-20 178.6 25.6 300 628-974 57-376 (378)
199 TIGR01885 Orn_aminotrans ornit 99.7 2.7E-15 5.8E-20 174.4 31.1 294 633-972 80-400 (401)
200 PRK09082 methionine aminotrans 99.7 7.1E-16 1.5E-20 178.3 25.9 344 573-970 19-385 (386)
201 PRK06943 adenosylmethionine--8 99.7 1.3E-15 2.8E-20 178.4 28.2 305 634-975 99-447 (453)
202 PLN00175 aminotransferase fami 99.7 1.6E-15 3.4E-20 176.8 28.6 345 574-973 44-412 (413)
203 PRK07681 aspartate aminotransf 99.7 1.6E-15 3.5E-20 176.1 28.6 295 628-970 69-384 (399)
204 PRK05387 histidinol-phosphate 99.7 5.2E-16 1.1E-20 177.3 24.0 283 635-973 63-352 (353)
205 PRK01278 argD acetylornithine 99.7 2E-15 4.3E-20 174.8 29.1 294 633-974 74-388 (389)
206 PLN03026 histidinol-phosphate 99.7 9E-16 2E-20 176.9 26.1 286 634-971 88-379 (380)
207 TIGR01329 cysta_beta_ly_E cyst 99.7 1.1E-15 2.5E-20 175.4 26.6 272 213-528 49-374 (378)
208 PRK09105 putative aminotransfe 99.7 1E-15 2.2E-20 175.8 26.0 281 634-972 80-368 (370)
209 PLN02822 serine palmitoyltrans 99.7 1.2E-15 2.6E-20 180.3 27.2 281 202-529 145-473 (481)
210 TIGR01437 selA_rel uncharacter 99.7 9.3E-16 2E-20 175.4 25.1 297 180-529 25-361 (363)
211 cd00609 AAT_like Aspartate ami 99.7 3.8E-15 8.2E-20 169.1 29.5 305 171-528 3-349 (350)
212 PLN02760 4-aminobutyrate:pyruv 99.7 5.5E-15 1.2E-19 174.7 31.2 308 633-976 134-493 (504)
213 COG0079 HisC Histidinol-phosph 99.7 2.3E-15 4.9E-20 170.1 26.5 287 634-974 59-354 (356)
214 PRK06173 adenosylmethionine--8 99.7 3.4E-15 7.5E-20 173.7 28.5 299 634-975 89-426 (429)
215 PRK06939 2-amino-3-ketobutyrat 99.7 2.4E-15 5.3E-20 174.5 27.3 318 164-529 41-389 (397)
216 PRK07482 hypothetical protein; 99.7 6.4E-15 1.4E-19 173.2 30.9 310 633-975 95-455 (461)
217 PRK11658 UDP-4-amino-4-deoxy-L 99.7 3.6E-15 7.8E-20 171.7 28.3 304 634-972 35-377 (379)
218 TIGR03588 PseC UDP-4-keto-6-de 99.7 3.2E-15 6.9E-20 172.5 27.8 306 634-971 31-379 (380)
219 PRK05093 argD bifunctional N-s 99.7 4.7E-15 1E-19 172.4 29.4 292 634-974 84-400 (403)
220 PLN02263 serine decarboxylase 99.7 9.7E-15 2.1E-19 167.9 31.2 334 151-530 76-440 (470)
221 KOG2862 Alanine-glyoxylate ami 99.7 4.1E-15 9E-20 155.5 25.2 308 630-974 48-382 (385)
222 TIGR01328 met_gam_lyase methio 99.7 3.6E-15 7.8E-20 171.9 27.7 214 214-468 62-281 (391)
223 cd00616 AHBA_syn 3-amino-5-hyd 99.7 2.1E-15 4.5E-20 172.1 25.5 280 212-528 19-352 (352)
224 PRK02731 histidinol-phosphate 99.7 1.4E-15 3E-20 174.8 24.1 285 635-973 70-365 (367)
225 PRK08361 aspartate aminotransf 99.7 3.6E-15 7.7E-20 172.8 27.6 300 628-973 70-389 (391)
226 PRK04612 argD acetylornithine 99.7 6.3E-15 1.4E-19 170.7 29.5 291 634-976 84-405 (408)
227 PRK13578 ornithine decarboxyla 99.7 6.8E-16 1.5E-20 184.8 21.9 283 211-529 174-561 (720)
228 TIGR03537 DapC succinyldiamino 99.7 3.1E-15 6.7E-20 170.7 26.6 297 628-970 36-349 (350)
229 PRK07309 aromatic amino acid a 99.7 6E-15 1.3E-19 170.9 29.3 305 628-975 67-389 (391)
230 PRK06207 aspartate aminotransf 99.7 7.1E-15 1.5E-19 170.9 29.8 303 628-975 78-403 (405)
231 PRK04635 histidinol-phosphate 99.7 1.5E-15 3.3E-20 173.5 23.8 282 635-971 63-352 (354)
232 PRK08117 4-aminobutyrate amino 99.7 8.5E-15 1.8E-19 171.6 30.7 299 633-976 87-431 (433)
233 PRK07582 cystathionine gamma-l 99.7 3.3E-15 7.2E-20 171.0 26.5 271 214-528 54-364 (366)
234 PRK05965 hypothetical protein; 99.7 1E-14 2.2E-19 171.3 31.3 314 634-981 92-454 (459)
235 cd00611 PSAT_like Phosphoserin 99.7 5.8E-16 1.3E-20 176.8 20.1 296 630-971 42-353 (355)
236 PRK05639 4-aminobutyrate amino 99.7 1E-14 2.2E-19 170.9 31.0 301 634-982 98-450 (457)
237 PRK13238 tnaA tryptophanase/L- 99.7 1.3E-14 2.8E-19 170.1 31.7 301 634-974 80-433 (460)
238 PRK08064 cystathionine beta-ly 99.7 3E-15 6.6E-20 172.6 26.0 281 633-971 55-383 (390)
239 PRK13360 omega amino acid--pyr 99.7 7.3E-15 1.6E-19 171.7 29.5 304 634-975 91-441 (442)
240 TIGR03576 pyridox_MJ0158 pyrid 99.7 7.3E-15 1.6E-19 166.5 28.4 311 151-530 8-344 (346)
241 PRK01688 histidinol-phosphate 99.7 1.3E-15 2.7E-20 173.9 22.4 280 635-969 60-351 (351)
242 PRK01533 histidinol-phosphate 99.7 1.7E-15 3.7E-20 173.5 23.3 281 635-978 67-359 (366)
243 PRK08593 4-aminobutyrate amino 99.7 1.3E-14 2.9E-19 169.9 31.1 304 633-983 86-437 (445)
244 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 4.6E-15 9.9E-20 169.1 26.2 272 214-528 58-386 (386)
245 TIGR00474 selA seryl-tRNA(sec) 99.7 8.8E-15 1.9E-19 170.0 29.0 301 180-527 93-453 (454)
246 PLN02880 tyrosine decarboxylas 99.7 6.9E-15 1.5E-19 173.5 28.5 358 140-529 54-480 (490)
247 PRK14807 histidinol-phosphate 99.7 5.8E-15 1.3E-19 168.5 27.2 282 635-971 62-349 (351)
248 PRK15399 lysine decarboxylase 99.7 4.1E-15 8.9E-20 177.9 26.8 299 633-974 196-559 (713)
249 PRK06290 aspartate aminotransf 99.7 8.6E-15 1.9E-19 170.2 29.0 305 628-975 81-406 (410)
250 COG0626 MetC Cystathionine bet 99.7 1.7E-14 3.6E-19 162.4 30.0 275 213-529 65-394 (396)
251 PRK08153 histidinol-phosphate 99.7 4E-15 8.6E-20 171.0 25.8 291 634-976 69-367 (369)
252 PRK06541 hypothetical protein; 99.7 9.1E-15 2E-19 171.6 29.1 306 634-976 97-457 (460)
253 PRK15407 lipopolysaccharide bi 99.7 8.8E-15 1.9E-19 170.7 28.7 376 568-973 2-435 (438)
254 cd00614 CGS_like CGS_like: Cys 99.7 3.2E-15 6.9E-20 171.6 24.6 210 633-888 41-256 (369)
255 PRK03158 histidinol-phosphate 99.7 5.3E-15 1.2E-19 169.4 26.4 282 634-971 66-358 (359)
256 COG0161 BioA Adenosylmethionin 99.7 3.7E-15 8.1E-20 168.3 24.5 357 568-977 38-446 (449)
257 PRK05967 cystathionine beta-ly 99.7 1.1E-14 2.3E-19 166.6 28.6 273 214-529 67-391 (395)
258 PRK08134 O-acetylhomoserine am 99.7 3.2E-15 6.8E-20 173.9 24.7 298 213-529 66-427 (433)
259 cd00610 OAT_like Acetyl ornith 99.7 8E-15 1.7E-19 171.1 28.2 298 631-971 78-412 (413)
260 PRK09221 beta alanine--pyruvat 99.7 1.5E-14 3.3E-19 169.2 30.2 308 634-975 94-444 (445)
261 COG3844 Kynureninase [Amino ac 99.7 6.9E-15 1.5E-19 154.8 24.1 309 629-975 73-403 (407)
262 PRK06176 cystathionine gamma-s 99.7 6.3E-15 1.4E-19 169.2 26.1 272 213-528 52-377 (380)
263 TIGR03540 DapC_direct LL-diami 99.7 1.2E-14 2.6E-19 168.0 28.6 293 628-968 67-380 (383)
264 PRK05942 aspartate aminotransf 99.7 9E-15 1.9E-19 169.6 27.6 295 627-972 72-387 (394)
265 PRK12414 putative aminotransfe 99.7 4E-15 8.7E-20 171.9 24.6 329 591-969 31-382 (384)
266 PRK08133 O-succinylhomoserine 99.7 9.3E-15 2E-19 168.6 27.5 213 213-468 63-281 (390)
267 PRK05630 adenosylmethionine--8 99.7 1.1E-14 2.3E-19 169.3 28.2 297 634-974 85-420 (422)
268 PRK04311 selenocysteine syntha 99.7 1.5E-14 3.3E-19 168.5 29.3 278 211-529 127-460 (464)
269 PLN02590 probable tyrosine dec 99.7 2.8E-14 6.1E-19 168.3 31.8 360 139-529 101-528 (539)
270 PRK06234 methionine gamma-lyas 99.7 6.1E-15 1.3E-19 170.7 25.9 274 214-528 67-396 (400)
271 PRK06105 aminotransferase; Pro 99.7 1.5E-14 3.3E-19 169.9 29.6 311 633-978 93-453 (460)
272 KOG1360 5-aminolevulinate synt 99.7 9.9E-16 2.2E-20 164.1 17.6 316 167-529 178-520 (570)
273 TIGR01141 hisC histidinol-phos 99.7 1.5E-14 3.3E-19 164.7 28.8 298 172-528 25-346 (346)
274 TIGR00858 bioF 8-amino-7-oxono 99.7 9.5E-15 2E-19 167.0 27.2 274 207-528 57-360 (360)
275 TIGR03576 pyridox_MJ0158 pyrid 99.7 4.1E-15 8.8E-20 168.6 23.7 281 629-971 51-344 (346)
276 PRK03321 putative aminotransfe 99.7 1.9E-15 4.2E-20 172.5 21.3 281 634-972 59-349 (352)
277 PRK07986 adenosylmethionine--8 99.7 9.5E-15 2.1E-19 169.8 27.3 297 634-974 88-423 (428)
278 PRK04013 argD acetylornithine/ 99.7 6.4E-15 1.4E-19 167.5 25.3 269 634-975 68-361 (364)
279 PRK08912 hypothetical protein; 99.7 1.1E-14 2.4E-19 168.5 27.7 301 627-972 62-384 (387)
280 PF00155 Aminotran_1_2: Aminot 99.7 1.2E-15 2.7E-20 174.7 19.4 290 635-968 47-363 (363)
281 PRK08248 O-acetylhomoserine am 99.7 4.8E-15 1E-19 172.4 24.4 142 215-362 68-215 (431)
282 KOG1359 Glycine C-acetyltransf 99.7 2.4E-15 5.1E-20 155.6 19.1 290 628-974 108-412 (417)
283 PRK08360 4-aminobutyrate amino 99.7 2.1E-14 4.6E-19 167.9 29.9 301 634-977 86-429 (443)
284 PRK07504 O-succinylhomoserine 99.7 9.9E-15 2.1E-19 168.7 26.6 273 214-529 68-395 (398)
285 TIGR01325 O_suc_HS_sulf O-succ 99.7 8.8E-15 1.9E-19 168.4 25.9 213 213-468 56-274 (380)
286 PRK06062 hypothetical protein; 99.7 1.9E-14 4.1E-19 168.8 29.0 297 634-977 97-448 (451)
287 PRK07777 aminotransferase; Val 99.7 1.1E-14 2.5E-19 168.4 27.0 298 628-971 61-383 (387)
288 PRK08742 adenosylmethionine--8 99.7 2.6E-14 5.6E-19 167.9 30.1 308 634-976 109-469 (472)
289 PRK06916 adenosylmethionine--8 99.7 1.8E-14 3.9E-19 169.3 28.8 310 634-976 101-457 (460)
290 PRK08114 cystathionine beta-ly 99.7 7.4E-15 1.6E-19 167.7 24.7 210 634-889 64-280 (395)
291 PRK13580 serine hydroxymethylt 99.7 7.6E-15 1.7E-19 169.2 24.8 276 215-529 99-441 (493)
292 PRK05968 hypothetical protein; 99.7 5.4E-15 1.2E-19 170.5 23.7 275 634-959 65-378 (389)
293 PRK07030 adenosylmethionine--8 99.7 2.1E-14 4.5E-19 168.7 29.0 308 633-975 91-447 (466)
294 PLN02509 cystathionine beta-ly 99.7 8.5E-15 1.8E-19 170.6 25.4 273 213-529 135-461 (464)
295 PRK12389 glutamate-1-semialdeh 99.7 1.5E-14 3.2E-19 169.0 27.5 323 592-974 65-427 (428)
296 TIGR02407 ectoine_ectB diamino 99.7 2.5E-14 5.3E-19 166.3 29.2 291 634-973 80-411 (412)
297 PRK08960 hypothetical protein; 99.7 1.9E-14 4.1E-19 166.6 28.2 290 628-959 69-375 (387)
298 PRK07337 aminotransferase; Val 99.7 1.4E-14 3E-19 167.7 27.0 302 628-970 67-385 (388)
299 PRK05769 4-aminobutyrate amino 99.7 3.5E-14 7.6E-19 166.1 30.4 290 634-974 99-439 (441)
300 PRK07050 cystathionine beta-ly 99.7 7.2E-15 1.6E-19 169.5 24.3 272 214-528 68-390 (394)
301 PLN00145 tyrosine/nicotianamin 99.7 4.7E-14 1E-18 165.1 31.4 311 628-976 94-426 (430)
302 PTZ00125 ornithine aminotransf 99.7 5E-14 1.1E-18 163.8 31.5 297 633-978 74-399 (400)
303 PRK09276 LL-diaminopimelate am 99.7 2.5E-14 5.5E-19 165.4 28.9 294 628-969 69-383 (385)
304 PRK04870 histidinol-phosphate 99.7 1.6E-14 3.4E-19 165.3 26.8 282 635-971 66-355 (356)
305 PRK08861 cystathionine gamma-s 99.7 2.3E-14 4.9E-19 164.4 27.7 273 214-529 56-383 (388)
306 TIGR03799 NOD_PanD_pyr putativ 99.7 7.6E-14 1.6E-18 165.0 32.8 298 204-526 122-518 (522)
307 cd06502 TA_like Low-specificit 99.7 7.4E-15 1.6E-19 166.6 23.5 272 213-528 34-336 (338)
308 PRK07550 hypothetical protein; 99.7 2.9E-14 6.3E-19 164.9 28.9 349 571-971 15-384 (386)
309 PRK06702 O-acetylhomoserine am 99.7 1.6E-14 3.4E-19 166.9 26.3 296 213-531 63-426 (432)
310 PRK09264 diaminobutyrate--2-ox 99.7 5.2E-14 1.1E-18 164.4 31.0 327 592-976 51-418 (425)
311 COG0001 HemL Glutamate-1-semia 99.7 6.3E-14 1.4E-18 156.4 29.9 294 633-976 94-430 (432)
312 PRK07810 O-succinylhomoserine 99.7 1.5E-14 3.2E-19 167.4 26.0 212 214-468 73-291 (403)
313 PRK10534 L-threonine aldolase; 99.7 2.7E-15 5.8E-20 170.0 19.3 282 634-972 36-331 (333)
314 PRK08134 O-acetylhomoserine am 99.7 4.4E-14 9.6E-19 164.3 29.8 144 633-796 65-213 (433)
315 PLN02482 glutamate-1-semialdeh 99.7 1.3E-14 2.8E-19 170.2 25.4 294 634-974 141-473 (474)
316 PRK08068 transaminase; Reviewe 99.7 2.4E-14 5.1E-19 165.9 27.1 287 628-959 70-377 (389)
317 COG2873 MET17 O-acetylhomoseri 99.7 2E-14 4.3E-19 154.4 24.0 140 216-361 67-212 (426)
318 PLN02242 methionine gamma-lyas 99.7 9E-15 2E-19 169.6 23.3 220 633-896 77-305 (418)
319 PRK07483 hypothetical protein; 99.7 7E-14 1.5E-18 163.6 31.0 312 634-978 75-441 (443)
320 PRK09147 succinyldiaminopimela 99.7 4.8E-14 1E-18 163.7 29.3 328 591-972 31-394 (396)
321 PRK06767 methionine gamma-lyas 99.6 8.9E-15 1.9E-19 168.7 23.0 284 634-973 63-384 (386)
322 PRK07812 O-acetylhomoserine am 99.6 2.9E-14 6.4E-19 165.6 27.4 292 215-529 73-431 (436)
323 PRK02936 argD acetylornithine 99.6 3.7E-14 7.9E-19 163.6 28.1 279 632-971 71-376 (377)
324 PRK08249 cystathionine gamma-s 99.6 5.8E-14 1.3E-18 162.1 29.7 274 213-529 66-393 (398)
325 PRK05958 8-amino-7-oxononanoat 99.6 6.8E-14 1.5E-18 161.6 30.4 277 205-529 78-383 (385)
326 PRK06058 4-aminobutyrate amino 99.6 3.6E-14 7.7E-19 166.5 28.3 294 633-974 100-442 (443)
327 PRK06082 4-aminobutyrate amino 99.6 5.1E-14 1.1E-18 165.3 29.6 296 633-976 114-453 (459)
328 PRK07505 hypothetical protein; 99.6 2.2E-14 4.7E-19 166.9 26.3 293 631-974 90-399 (402)
329 PRK12403 putative aminotransfe 99.6 8.9E-14 1.9E-18 163.5 31.5 305 633-976 99-454 (460)
330 PRK08861 cystathionine gamma-s 99.6 2.6E-14 5.7E-19 163.8 26.4 217 634-896 55-280 (388)
331 TIGR01825 gly_Cac_T_rel pyrido 99.6 1.9E-14 4.2E-19 166.3 25.7 277 205-529 72-377 (385)
332 COG1982 LdcC Arginine/lysine/o 99.6 1.5E-14 3.3E-19 166.3 24.2 300 634-969 72-403 (557)
333 PRK07811 cystathionine gamma-s 99.6 8E-14 1.7E-18 160.7 30.4 273 213-528 63-387 (388)
334 COG2008 GLY1 Threonine aldolas 99.6 6.5E-15 1.4E-19 159.6 19.9 290 632-972 35-341 (342)
335 PRK07495 4-aminobutyrate amino 99.6 7.8E-14 1.7E-18 162.4 30.5 297 634-976 85-423 (425)
336 TIGR00707 argD acetylornithine 99.6 5.1E-14 1.1E-18 162.4 28.6 291 633-971 70-378 (379)
337 cd00378 SHMT Serine-glycine hy 99.6 3.9E-14 8.5E-19 164.8 27.8 277 211-529 64-381 (402)
338 TIGR00508 bioA adenosylmethion 99.6 4E-14 8.6E-19 165.1 27.8 298 634-974 90-426 (427)
339 PRK05613 O-acetylhomoserine am 99.6 6.4E-14 1.4E-18 162.8 29.2 142 213-360 71-219 (437)
340 TIGR01264 tyr_amTase_E tyrosin 99.6 7.1E-14 1.5E-18 162.6 29.7 297 636-973 77-398 (401)
341 TIGR00713 hemL glutamate-1-sem 99.6 2.5E-14 5.3E-19 167.5 25.9 294 634-974 90-422 (423)
342 PRK08574 cystathionine gamma-s 99.6 5.1E-14 1.1E-18 162.0 27.9 212 213-468 55-273 (385)
343 PRK09028 cystathionine beta-ly 99.6 3.4E-14 7.3E-19 162.8 26.2 217 634-896 63-287 (394)
344 PRK08056 threonine-phosphate d 99.6 2.3E-14 4.9E-19 164.0 24.9 283 634-972 57-353 (356)
345 TIGR00709 dat 2,4-diaminobutyr 99.6 1.2E-13 2.5E-18 162.1 31.3 297 633-976 83-437 (442)
346 PLN02187 rooty/superroot1 99.6 6E-14 1.3E-18 165.4 29.1 345 588-977 65-441 (462)
347 TIGR01329 cysta_beta_ly_E cyst 99.6 1.9E-14 4.2E-19 165.3 24.2 280 634-973 49-374 (378)
348 PRK07503 methionine gamma-lyas 99.6 5.6E-14 1.2E-18 162.8 28.1 276 213-529 67-396 (403)
349 PLN02656 tyrosine transaminase 99.6 4.5E-14 9.7E-19 164.5 27.5 340 589-973 31-402 (409)
350 PRK06917 hypothetical protein; 99.6 1.5E-13 3.2E-18 161.0 31.8 342 592-977 43-440 (447)
351 PRK09792 4-aminobutyrate trans 99.6 9.6E-14 2.1E-18 161.8 30.1 296 634-973 85-420 (421)
352 PRK07269 cystathionine gamma-s 99.6 5E-14 1.1E-18 160.7 27.1 227 214-484 57-289 (364)
353 TIGR01324 cysta_beta_ly_B cyst 99.6 3E-14 6.5E-19 163.2 25.1 209 634-888 52-265 (377)
354 COG1103 Archaea-specific pyrid 99.6 3.5E-14 7.5E-19 145.6 22.6 302 634-974 63-380 (382)
355 PRK15399 lysine decarboxylase 99.6 2.7E-14 5.9E-19 170.9 25.6 272 211-529 195-555 (713)
356 PRK07671 cystathionine beta-ly 99.6 4.2E-14 9E-19 162.4 26.2 212 213-468 52-270 (377)
357 PLN00144 acetylornithine trans 99.6 7.9E-14 1.7E-18 160.6 28.6 288 634-974 59-380 (382)
358 PRK06938 diaminobutyrate--2-ox 99.6 1.2E-13 2.6E-18 162.3 30.5 295 634-975 108-461 (464)
359 PLN02242 methionine gamma-lyas 99.6 4.5E-14 9.7E-19 163.8 26.5 217 213-470 78-302 (418)
360 PRK07481 hypothetical protein; 99.6 1.2E-13 2.7E-18 161.9 30.5 306 634-975 88-446 (449)
361 PRK13355 bifunctional HTH-doma 99.6 3.2E-14 6.9E-19 170.5 26.1 309 627-974 184-514 (517)
362 PRK06348 aspartate aminotransf 99.6 1.2E-13 2.6E-18 159.7 29.9 298 628-970 66-381 (384)
363 PRK07582 cystathionine gamma-l 99.6 2.4E-14 5.2E-19 163.9 23.8 276 634-970 53-365 (366)
364 TIGR01328 met_gam_lyase methio 99.6 4.7E-14 1E-18 162.8 26.3 211 634-888 61-276 (391)
365 PRK07480 putative aminotransfe 99.6 1E-13 2.2E-18 162.6 29.5 307 633-977 95-451 (456)
366 PRK03317 histidinol-phosphate 99.6 4E-14 8.7E-19 162.7 25.5 289 629-974 66-364 (368)
367 PRK09148 aminotransferase; Val 99.6 6.9E-14 1.5E-18 162.7 27.7 305 628-975 68-391 (405)
368 PRK08247 cystathionine gamma-s 99.6 6.3E-14 1.4E-18 160.6 26.6 272 213-528 54-363 (366)
369 PRK06234 methionine gamma-lyas 99.6 2.7E-14 5.9E-19 165.3 23.7 211 634-888 66-283 (400)
370 PTZ00433 tyrosine aminotransfe 99.6 8.1E-14 1.8E-18 162.6 27.9 307 628-976 75-410 (412)
371 PRK07568 aspartate aminotransf 99.6 9.2E-14 2E-18 161.4 28.2 259 678-976 110-394 (397)
372 TIGR01365 serC_2 phosphoserine 99.6 4.8E-14 1E-18 160.1 25.0 294 210-528 38-368 (374)
373 PRK15400 lysine decarboxylase 99.6 1.8E-14 4E-19 172.5 22.4 274 211-529 195-555 (714)
374 PRK07366 succinyldiaminopimela 99.6 6.5E-14 1.4E-18 162.2 26.4 297 628-970 68-386 (388)
375 PRK00011 glyA serine hydroxyme 99.6 9.5E-14 2.1E-18 162.3 28.1 272 216-529 76-385 (416)
376 PRK07504 O-succinylhomoserine 99.6 6.6E-14 1.4E-18 161.9 26.3 208 634-888 67-281 (398)
377 TIGR02379 ECA_wecE TDP-4-keto- 99.6 1E-13 2.3E-18 159.0 27.7 304 633-972 32-375 (376)
378 TIGR03531 selenium_SpcS O-phos 99.6 1.5E-13 3.3E-18 158.5 29.1 341 139-529 28-442 (444)
379 PRK07908 hypothetical protein; 99.6 6.2E-14 1.3E-18 159.9 25.8 280 634-973 60-346 (349)
380 PRK06107 aspartate aminotransf 99.6 7.1E-14 1.5E-18 162.5 26.7 306 628-974 70-400 (402)
381 PRK07683 aminotransferase A; V 99.6 1.2E-13 2.7E-18 159.7 28.5 299 628-973 65-382 (387)
382 PRK07046 aminotransferase; Val 99.6 5.3E-14 1.1E-18 164.8 25.5 299 633-975 116-451 (453)
383 PRK07036 hypothetical protein; 99.6 2E-13 4.3E-18 160.7 30.4 307 634-977 97-455 (466)
384 PRK05613 O-acetylhomoserine am 99.6 8.2E-14 1.8E-18 161.9 26.8 145 633-796 70-219 (437)
385 KOG0257 Kynurenine aminotransf 99.6 5.1E-14 1.1E-18 154.3 23.2 223 572-819 18-267 (420)
386 KOG1360 5-aminolevulinate synt 99.6 2E-14 4.4E-19 154.2 19.6 285 634-976 218-526 (570)
387 PRK05994 O-acetylhomoserine am 99.6 8E-14 1.7E-18 162.5 26.5 152 214-374 66-223 (427)
388 PRK08776 cystathionine gamma-s 99.6 1.5E-13 3.3E-18 158.9 28.1 273 214-529 63-390 (405)
389 PRK08574 cystathionine gamma-s 99.6 6.9E-14 1.5E-18 160.9 25.1 208 634-888 55-268 (385)
390 PRK06084 O-acetylhomoserine am 99.6 6.4E-14 1.4E-18 162.9 25.0 294 215-529 62-422 (425)
391 PRK08045 cystathionine gamma-s 99.6 1.6E-13 3.5E-18 157.8 27.9 273 214-529 55-382 (386)
392 TIGR01140 L_thr_O3P_dcar L-thr 99.6 9.6E-14 2.1E-18 157.1 25.6 269 635-969 50-330 (330)
393 PRK00615 glutamate-1-semialdeh 99.6 7.2E-14 1.6E-18 162.5 25.1 298 634-976 95-430 (433)
394 PRK06460 hypothetical protein; 99.6 2.4E-13 5.1E-18 156.2 29.0 213 212-467 46-264 (376)
395 PRK08363 alanine aminotransfer 99.6 1.7E-13 3.7E-18 159.2 28.1 306 628-974 70-394 (398)
396 PRK07503 methionine gamma-lyas 99.6 8.6E-14 1.9E-18 161.2 25.3 211 634-888 67-282 (403)
397 PRK06931 diaminobutyrate--2-ox 99.6 2.5E-13 5.5E-18 159.5 29.5 330 592-977 70-457 (459)
398 PRK07812 O-acetylhomoserine am 99.6 3.2E-13 7E-18 156.9 30.1 144 634-796 71-219 (436)
399 PRK08249 cystathionine gamma-s 99.6 9E-14 1.9E-18 160.5 25.2 210 633-888 65-279 (398)
400 TIGR01265 tyr_nico_aTase tyros 99.6 3.3E-13 7.1E-18 157.1 30.1 297 636-973 77-400 (403)
401 PRK08776 cystathionine gamma-s 99.6 1.9E-13 4.1E-18 158.1 27.7 210 633-888 61-276 (405)
402 PRK07050 cystathionine beta-ly 99.6 5.1E-14 1.1E-18 162.5 22.9 209 634-888 67-281 (394)
403 PRK04311 selenocysteine syntha 99.6 1.3E-13 2.7E-18 160.9 26.1 291 633-972 128-462 (464)
404 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 1.3E-13 2.8E-18 158.7 26.0 307 633-972 32-374 (375)
405 PRK05166 histidinol-phosphate 99.6 1.8E-13 3.9E-18 157.5 27.1 282 636-972 75-369 (371)
406 PRK06777 4-aminobutyrate amino 99.6 2.6E-13 5.6E-18 158.2 28.7 294 634-972 85-419 (421)
407 TIGR03538 DapC_gpp succinyldia 99.6 2.1E-13 4.5E-18 158.2 27.6 292 627-970 63-391 (393)
408 PRK08133 O-succinylhomoserine 99.6 1.4E-13 3.1E-18 158.8 26.0 209 633-888 62-276 (390)
409 PRK07810 O-succinylhomoserine 99.6 1.8E-13 4E-18 158.2 26.8 209 634-888 72-286 (403)
410 TIGR02080 O_succ_thio_ly O-suc 99.6 3.2E-13 6.8E-18 155.3 28.5 212 214-468 54-272 (382)
411 PRK02627 acetylornithine amino 99.6 6.5E-13 1.4E-17 154.3 31.4 293 633-974 82-394 (396)
412 PRK05939 hypothetical protein; 99.6 2.7E-13 5.8E-18 156.4 27.8 142 213-361 49-196 (397)
413 COG0399 WecE Predicted pyridox 99.6 2.1E-13 4.5E-18 152.7 25.7 302 633-973 35-372 (374)
414 PRK04781 histidinol-phosphate 99.6 2.6E-13 5.6E-18 155.7 27.3 286 635-972 62-361 (364)
415 PRK05994 O-acetylhomoserine am 99.6 8.8E-13 1.9E-17 153.7 32.0 154 634-810 65-223 (427)
416 PF01041 DegT_DnrJ_EryC1: DegT 99.6 7.1E-14 1.5E-18 160.2 22.4 301 633-969 26-363 (363)
417 KOG1383 Glutamate decarboxylas 99.6 3.2E-13 6.9E-18 149.2 26.3 352 139-529 54-442 (491)
418 PRK15481 transcriptional regul 99.6 2.6E-13 5.6E-18 159.4 27.5 286 636-973 125-430 (431)
419 KOG0053 Cystathionine beta-lya 99.6 8.3E-14 1.8E-18 154.5 21.7 160 215-383 81-247 (409)
420 PRK07811 cystathionine gamma-s 99.6 1.9E-13 4.2E-18 157.6 25.8 207 634-889 63-278 (388)
421 PLN00143 tyrosine/nicotianamin 99.6 5.7E-13 1.2E-17 155.2 29.8 311 628-975 74-405 (409)
422 PLN02721 threonine aldolase 99.6 1.5E-13 3.3E-18 156.8 24.4 273 213-529 42-348 (353)
423 PRK05939 hypothetical protein; 99.6 5.3E-13 1.2E-17 154.0 29.0 226 633-888 48-283 (397)
424 PRK08248 O-acetylhomoserine am 99.6 4.6E-13 9.9E-18 155.9 28.6 143 634-796 66-213 (431)
425 TIGR00700 GABAtrnsam 4-aminobu 99.6 5.9E-13 1.3E-17 155.4 29.6 293 634-973 78-419 (420)
426 PRK06434 cystathionine gamma-l 99.6 2.7E-13 5.8E-18 155.1 25.8 271 213-528 66-383 (384)
427 TIGR00474 selA seryl-tRNA(sec) 99.6 1.2E-13 2.6E-18 160.6 23.3 166 633-820 123-309 (454)
428 PLN03226 serine hydroxymethylt 99.6 3.3E-13 7.1E-18 158.6 27.1 285 216-529 85-415 (475)
429 PRK00062 glutamate-1-semialdeh 99.6 1.7E-13 3.7E-18 160.2 24.6 293 634-975 92-425 (426)
430 PRK09265 aminotransferase AlaT 99.6 4.3E-13 9.3E-18 156.2 27.1 296 636-974 76-401 (404)
431 PLN02509 cystathionine beta-ly 99.6 3.7E-13 8E-18 157.0 26.1 217 633-896 134-359 (464)
432 PRK06836 aspartate aminotransf 99.6 5.4E-13 1.2E-17 154.7 27.6 298 628-975 73-392 (394)
433 PRK08636 aspartate aminotransf 99.6 8.2E-13 1.8E-17 153.7 28.9 306 627-974 70-400 (403)
434 KOG2467 Glycine/serine hydroxy 99.6 2.8E-13 6.1E-18 144.4 22.4 347 580-972 46-424 (477)
435 PRK06148 hypothetical protein; 99.6 4.2E-13 9.1E-18 171.0 28.5 327 592-975 634-1011(1013)
436 COG1982 LdcC Arginine/lysine/o 99.6 1.4E-13 3E-18 158.6 21.6 280 211-529 70-404 (557)
437 PRK06176 cystathionine gamma-s 99.6 3.4E-13 7.5E-18 154.9 24.9 208 634-888 52-265 (380)
438 PRK06460 hypothetical protein; 99.6 7.1E-13 1.5E-17 152.2 27.4 209 634-888 47-260 (376)
439 PRK06358 threonine-phosphate d 99.6 5.5E-13 1.2E-17 152.4 26.3 282 634-972 56-353 (354)
440 PRK02731 histidinol-phosphate 99.6 1.2E-12 2.7E-17 150.3 29.3 265 214-529 70-362 (367)
441 PRK08175 aminotransferase; Val 99.6 1.1E-12 2.4E-17 152.2 29.1 309 627-982 66-394 (395)
442 PRK05967 cystathionine beta-ly 99.6 5.1E-13 1.1E-17 152.9 25.5 211 633-889 65-280 (395)
443 PRK11658 UDP-4-amino-4-deoxy-L 99.6 6.2E-13 1.3E-17 153.2 26.4 288 213-529 35-375 (379)
444 PRK04260 acetylornithine amino 99.6 1.9E-12 4.2E-17 149.2 30.5 278 637-971 71-374 (375)
445 PRK08045 cystathionine gamma-s 99.6 3E-13 6.6E-18 155.5 23.5 210 634-889 54-269 (386)
446 PRK06084 O-acetylhomoserine am 99.6 1.2E-12 2.7E-17 152.2 28.8 143 634-796 60-207 (425)
447 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 1.2E-12 2.7E-17 152.4 28.8 142 214-361 60-207 (418)
448 PRK08297 L-lysine aminotransfe 99.6 7.7E-13 1.7E-17 154.8 27.0 296 634-975 94-442 (443)
449 PRK06425 histidinol-phosphate 99.6 3.7E-13 7.9E-18 152.5 23.6 277 634-972 42-331 (332)
450 cd01494 AAT_I Aspartate aminot 99.6 9.9E-14 2.1E-18 140.1 16.7 161 634-812 2-170 (170)
451 PF00282 Pyridoxal_deC: Pyrido 99.6 4.5E-13 9.7E-18 153.1 23.9 323 131-482 1-372 (373)
452 PRK06149 hypothetical protein; 99.5 8.3E-13 1.8E-17 168.3 28.5 295 633-974 625-970 (972)
453 PTZ00377 alanine aminotransfer 99.5 2E-12 4.3E-17 153.7 29.9 311 628-976 115-477 (481)
454 PRK05664 threonine-phosphate d 99.5 9.6E-13 2.1E-17 148.9 26.0 269 635-974 52-328 (330)
455 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2.2E-12 4.7E-17 150.3 29.4 156 634-813 59-219 (418)
456 PLN02271 serine hydroxymethylt 99.5 4.1E-13 8.9E-18 155.2 22.8 292 215-528 198-535 (586)
457 TIGR01325 O_suc_HS_sulf O-succ 99.5 1.6E-13 3.6E-18 157.9 19.7 208 634-888 56-269 (380)
458 cd00615 Orn_deC_like Ornithine 99.5 4.5E-14 9.7E-19 157.0 14.4 212 211-463 59-294 (294)
459 TIGR03251 LAT_fam L-lysine 6-t 99.5 8.6E-13 1.9E-17 154.2 25.4 292 634-970 87-430 (431)
460 PRK02610 histidinol-phosphate 99.5 1.4E-12 3.1E-17 150.2 26.9 285 636-974 70-371 (374)
461 PRK14809 histidinol-phosphate 99.5 7.9E-13 1.7E-17 151.3 24.7 278 635-973 68-356 (357)
462 PRK06918 4-aminobutyrate amino 99.5 3.1E-12 6.7E-17 150.7 30.2 304 633-977 98-446 (451)
463 PRK06959 putative threonine-ph 99.5 1E-12 2.2E-17 149.1 25.3 273 635-978 56-337 (339)
464 PRK05839 hypothetical protein; 99.5 1E-12 2.2E-17 151.3 25.4 322 590-972 25-372 (374)
465 TIGR03588 PseC UDP-4-keto-6-de 99.5 1E-12 2.2E-17 151.7 24.7 290 213-529 31-378 (380)
466 KOG1404 Alanine-glyoxylate ami 99.5 3.8E-13 8.3E-18 145.3 19.3 343 568-968 44-432 (442)
467 PTZ00376 aspartate aminotransf 99.5 7.1E-13 1.5E-17 154.2 23.2 300 627-973 71-402 (404)
468 PRK07671 cystathionine beta-ly 99.5 1.3E-12 2.8E-17 150.0 24.9 209 633-888 51-265 (377)
469 cd00617 Tnase_like Tryptophana 99.5 2.4E-12 5.2E-17 149.0 27.1 303 634-976 55-410 (431)
470 PRK05387 histidinol-phosphate 99.5 5E-12 1.1E-16 144.5 29.3 268 215-529 64-349 (353)
471 TIGR00699 GABAtrns_euk 4-amino 99.5 3.7E-12 8E-17 148.7 28.5 288 636-971 109-463 (464)
472 PLN02376 1-aminocyclopropane-1 99.5 2.9E-12 6.2E-17 152.1 27.8 305 627-974 93-438 (496)
473 KOG1368 Threonine aldolase [Am 99.5 2.6E-13 5.7E-18 141.2 15.7 287 634-969 58-363 (384)
474 PRK07865 N-succinyldiaminopime 99.5 1.3E-12 2.7E-17 150.1 23.3 283 628-969 62-363 (364)
475 PRK07269 cystathionine gamma-s 99.5 1.9E-12 4.1E-17 147.8 24.3 206 634-888 56-267 (364)
476 PRK07590 L,L-diaminopimelate a 99.5 4.8E-12 1E-16 147.6 28.3 356 570-971 17-408 (409)
477 PRK03967 histidinol-phosphate 99.5 1.5E-12 3.3E-17 147.7 23.3 272 635-973 58-333 (337)
478 KOG1357 Serine palmitoyltransf 99.5 2.2E-13 4.7E-18 149.3 15.1 297 628-974 178-502 (519)
479 PRK09275 aspartate aminotransf 99.5 2.1E-12 4.5E-17 152.2 24.5 360 590-976 101-519 (527)
480 PRK06225 aspartate aminotransf 99.5 1.7E-11 3.8E-16 141.5 31.6 305 171-529 33-372 (380)
481 KOG0629 Glutamate decarboxylas 99.5 1.5E-12 3.3E-17 141.7 20.8 261 625-896 134-422 (510)
482 PRK08247 cystathionine gamma-s 99.5 4.1E-12 9E-17 145.6 25.7 209 634-889 54-268 (366)
483 TIGR02080 O_succ_thio_ly O-suc 99.5 4.2E-12 9E-17 146.1 25.6 209 634-888 53-267 (382)
484 PLN02607 1-aminocyclopropane-1 99.5 7.8E-12 1.7E-16 146.7 28.1 309 627-978 94-441 (447)
485 PRK14808 histidinol-phosphate 99.5 3.4E-12 7.5E-17 144.6 24.2 268 635-970 59-333 (335)
486 COG2873 MET17 O-acetylhomoseri 99.5 1.1E-11 2.3E-16 133.7 26.2 225 634-892 64-314 (426)
487 PLN02452 phosphoserine transam 99.5 5.2E-12 1.1E-16 143.6 25.4 282 210-529 51-359 (365)
488 TIGR03539 DapC_actino succinyl 99.5 2.8E-12 6.2E-17 146.7 23.5 282 627-968 55-356 (357)
489 PRK05957 aspartate aminotransf 99.5 1.9E-11 4.1E-16 141.6 30.6 306 170-528 31-380 (389)
490 PRK06855 aminotransferase; Val 99.5 8E-12 1.7E-16 146.6 27.6 308 627-974 72-429 (433)
491 TIGR03801 asp_4_decarbox aspar 99.5 6.5E-12 1.4E-16 147.9 26.4 282 678-976 182-518 (521)
492 PRK09105 putative aminotransfe 99.5 1.5E-11 3.2E-16 141.4 28.7 264 213-528 80-365 (370)
493 PLN02450 1-aminocyclopropane-1 99.5 1.2E-11 2.6E-16 146.1 28.7 305 628-975 86-431 (468)
494 PRK07049 methionine gamma-lyas 99.5 9.4E-12 2E-16 145.1 27.2 211 215-468 87-315 (427)
495 PRK06108 aspartate aminotransf 99.5 3.6E-11 7.9E-16 138.9 32.0 278 207-528 61-377 (382)
496 COG1103 Archaea-specific pyrid 99.5 2.2E-12 4.8E-17 132.6 18.8 277 212-529 62-376 (382)
497 PRK06702 O-acetylhomoserine am 99.5 2.7E-12 5.8E-17 148.5 22.1 145 634-797 63-212 (432)
498 PRK00854 rocD ornithine--oxo-a 99.5 1.9E-11 4E-16 142.3 28.6 277 211-529 83-397 (401)
499 TIGR01365 serC_2 phosphoserine 99.5 3.2E-12 7E-17 145.3 21.4 307 628-973 35-372 (374)
500 PRK08088 4-aminobutyrate amino 99.5 2.9E-11 6.3E-16 141.6 30.1 295 635-975 87-424 (425)
No 1
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-175 Score=1437.48 Aligned_cols=884 Identities=69% Similarity=1.114 Sum_probs=833.4
Q ss_pred cccccccccCCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHH
Q 001990 83 QTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLA 161 (985)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~ 161 (985)
.++++...++++.|+|..|||+|++.|+++||+++|++++|+|++++||++| +++++.+| ++++|.|+++|++++|
T Consensus 37 ~~~~~~~~~~~~~d~F~~RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~Ir~~~~l~~~---~~~~E~eml~~l~~ia 113 (1001)
T KOG2040|consen 37 ATRSQSERIFPPLDTFPRRHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSIRLKRPLKMD---KPLCESEMLQHLEDIA 113 (1001)
T ss_pred hhcchhhhccCcccccccccCCCCchHHHHHHHhcChhhHHHHHHhhcchhhcccchhcCC---CCcCHHHHHHHHHHHH
Confidence 4456667788999999999999999999999999999999999999999999 88999997 8999999999999999
Q ss_pred cCCCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHH
Q 001990 162 SMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAA 241 (985)
Q Consensus 162 ~~n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ 241 (985)
+||+.|.+|+|.|||++.+|++|.|+++++|+|||.|||||||||||+||.+.+||+++++|||++.+|+|+.|.|||++
T Consensus 114 ~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaa 193 (1001)
T KOG2040|consen 114 SKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAA 193 (1001)
T ss_pred hhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhccCCCEeEEEEEcCCCCeeeccHHHHHHH
Q 001990 242 EAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKN 321 (985)
Q Consensus 242 ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~l~~~t~~V~v~~pn~~G~i~dl~~I~~~ 321 (985)
|||.|+.+.+ ++++++|+..+||+++++++++++++|++++..++++.....+++++|++|+|++.|.|.|..++++.
T Consensus 194 EAm~l~~~~~--krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~~~~s~~~v~gvlvQYP~t~G~i~d~~el~~~ 271 (1001)
T KOG2040|consen 194 EAMALCNRIN--KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKEADYSSKDVSGVLVQYPDTEGSVLDFDELVEL 271 (1001)
T ss_pred HHHHHHHhhc--ccceEEecCCCCcchhhhhhccccccceeEEecCHHHhhccccceeEEEEEcCCCCCcccCHHHHHHH
Confidence 9999998876 77889999999999999999999999999988877654434567999999999999999999999999
Q ss_pred HHhCCcEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceE
Q 001990 322 AHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 401 (985)
Q Consensus 322 a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~ 401 (985)
+|+.|.++++++|++++.++++|++|||||++||+|.||+|+|+||||+|||+|++++.|.||||++|+|+|+.|+++|+
T Consensus 272 a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~R 351 (1001)
T KOG2040|consen 272 AHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYR 351 (1001)
T ss_pred hhccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEe
Q 001990 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 481 (985)
Q Consensus 402 l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~ 481 (985)
|.||||||||||+||||||||+|+|+|+++++|+.|+|++||++|++|++..+.+|..+|+..| .++.++++|+++.|.
T Consensus 352 LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~fFDTLkI~ 430 (1001)
T KOG2040|consen 352 LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKPFFDTLKIR 430 (1001)
T ss_pred HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhccccccceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999988 888888999999999
Q ss_pred cCC-HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh-----hccCCCCccCC
Q 001990 482 CAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV-----ETAIPSGLTRE 555 (985)
Q Consensus 482 ~~~-~~~l~~~L~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~~~~~~~~~~~l~~~~-----~~~ip~~~~~~ 555 (985)
+.. ++++.++..+++|+++.++++.+.+|+.|+.+++|+|.+++.|.+. |..++..+. ....|+.++|+
T Consensus 431 ~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~~~-----ss~~~~~E~~~~e~~~~~~s~f~Rt 505 (1001)
T KOG2040|consen 431 CGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFNEE-----SSVELVAESMGEECNGIPPSVFKRT 505 (1001)
T ss_pred ecCcHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHccC-----ChHHHHHHhhhhhccCCCCcccccC
Confidence 987 8999999989999999999999999999999999999999999965 344443322 12468999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHH
Q 001990 556 SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (985)
Q Consensus 556 ~~~~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~ 635 (985)
++||++|||+.++||++++|||++|.+||+++.++||+||||||++|+..|+.|+.|++|+|.|||+|.|+.||+.+++.
T Consensus 506 s~~L~hpVFn~yhSEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~ 585 (1001)
T KOG2040|consen 506 SPYLTHPVFNSYHSETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFT 585 (1001)
T ss_pred CccccchhhhhcccHHHHHHHHHHhhccchhhhhhcccccceeeeccccceeccccchhhccCCCCCchHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCC
Q 001990 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (985)
Q Consensus 636 el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~i 715 (985)
+++++||+++|.|..++++|||++|++++++++|+|++++|+..|+.+++|.++||+||+++++.|++|+.|.++.+|.+
T Consensus 586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i 665 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI 665 (1001)
T ss_pred HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccc
Q 001990 716 NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTF 795 (985)
Q Consensus 716 Dle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl 795 (985)
|+.+|+++.++|+++.+++|++||+++|+++++|+++++++|+||..+++|||+.++++|+++||++|+|+++.++||||
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTF 745 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTF 745 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeeccccee
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHH
Q 001990 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (985)
Q Consensus 796 ~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~ 875 (985)
|+|||+||||+|.+.+++++.+++|+..+.... +.+.....+.++++|||+++++..+|+|++++|..|+++..+..
T Consensus 746 cIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~---~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~A 822 (1001)
T KOG2040|consen 746 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPG---RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIA 822 (1001)
T ss_pred eecCCCCCCCCCccchhhhccccCCCCCccCCC---CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHH
Confidence 999999999999999999999999987654221 01112345567888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCH
Q 001990 876 ILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (985)
Q Consensus 876 ~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~ 955 (985)
+.|++|+.++|+..+++++.+.++.+.|+|++|+++||+..|+++.+++++|.++|+++++++||++++++|.||+..++
T Consensus 823 iLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k 902 (1001)
T KOG2040|consen 823 ILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDK 902 (1001)
T ss_pred hhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccH
Confidence 99999999999999999998887889999999999998878999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHHHHHHH--HccCCCC
Q 001990 956 VCHNREDLFFQILLSLTKFTT--FAGRVGQ 983 (985)
Q Consensus 956 eeId~~~~~i~aL~~i~~~~~--~~~~~~~ 983 (985)
+|+| +|+++|..|.+|+. +.|+.++
T Consensus 903 ~ElD---RfcdAliSIreEI~~ie~G~~dk 929 (1001)
T KOG2040|consen 903 AELD---RFCDALISIREEIAQIEEGRQDK 929 (1001)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHccCCCc
Confidence 9999 99999999999886 3555543
No 2
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-169 Score=1504.83 Aligned_cols=868 Identities=55% Similarity=0.950 Sum_probs=796.9
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCcccee
Q 001990 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSF 170 (985)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~~~ 170 (985)
+.+.++|..|||+||++|+++||++||++|+||||+++||+++ ++++|+|| +++||.|+++|++++|++|+.+.+|
T Consensus 7 ~~~~~~f~~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir~~~~l~lp---~~~sE~e~~~~~~~~a~kN~~~~~f 83 (954)
T PRK12566 7 LQEPDAFLRRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIRLNRPLDLP---AALDEQAALARLRGYAEQNQVWTSL 83 (954)
T ss_pred cccccchhhccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcccc
Confidence 4567889999999999999999999999999999977899999 88889998 7999999999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhh
Q 001990 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (985)
Q Consensus 171 lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~ 250 (985)
+|+|+|+|++|++|.++|++||+|||+|||||||+|||+||++||||+|||+|||||.+|+||||++||++||++|+.+.
T Consensus 84 iG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~ 163 (954)
T PRK12566 84 IGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRV 163 (954)
T ss_pred ccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHH
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEE
Q 001990 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKV 329 (985)
Q Consensus 251 ~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~gall 329 (985)
+++++++|+|++.+||++++++++|++..|++++.. ++++ +++++++|++|+||++|.|+|+++|++++|++|+++
T Consensus 164 ~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~---~~~~~~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 164 AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD---AVDNLAAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc---chhhcCCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCEE
Confidence 644578999999999999999999999999999974 4444 567899999999999999999999999999999999
Q ss_pred EEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccc
Q 001990 330 VMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQ 409 (985)
Q Consensus 330 iV~a~~~alg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~ 409 (985)
+|++|+++++++++|++|||||+||++|+||+||+|||||+|||+++++++|+||||+||+|+|.+|+++|+|+||||||
T Consensus 241 ~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQ 320 (954)
T PRK12566 241 CVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQ 320 (954)
T ss_pred EEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecC-CHHHH
Q 001990 410 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAI 488 (985)
Q Consensus 410 ~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-~~~~l 488 (985)
|||||||||||||+|+|+|++|++|+.++|++||++++++++.+|+||+++|.+.| +++..+++|++|++++. .+.++
T Consensus 321 HIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~fF~~~~v~~~~~~~~~ 399 (954)
T PRK12566 321 HIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRHFFDTLTLEVGGAQAAI 399 (954)
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCccceEEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 99987799999999886 37888
Q ss_pred HHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhh-hhccCCCCccCCCCCCCCcccccc
Q 001990 489 ASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEE-VETAIPSGLTRESPYLTHPVFNKY 567 (985)
Q Consensus 489 ~~~L~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~~~~~~~~~~~l~~~-~~~~ip~~~~~~~~~~~~pv~~~~ 567 (985)
.++..++||+++.++++.+.+|++|++|.+|++.++++|...+... +.+.+... +...||+.++|+++|+++|||+++
T Consensus 400 ~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~~ 478 (954)
T PRK12566 400 IESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFLGADHGL-DVAALDQGALAEGIPAVLQRRTAYLQHPVFNAH 478 (954)
T ss_pred HHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhcCCCccc-chhhhccccccccCchhhhcCCccccCcccccC
Confidence 8888899999999888899999999999999999999996321110 11112110 112499999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCC
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~ 647 (985)
+||.|++||+++|++||.+++++|+|||+||||+|++.|++|++|++|.+.|||||.|++||++|+++|+++++|+++|+
T Consensus 479 ~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGm 558 (954)
T PRK12566 479 HSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGF 558 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCCCHHHHHHHHHhc
Q 001990 648 DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (985)
Q Consensus 648 ~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~iDle~L~~~i~~~ 727 (985)
+.+++++++|++||+++++++|.|++++|+.+|++||++.+.|++||.++...|++++.+|+|++|.+|+++|+++++++
T Consensus 559 d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~ 638 (954)
T PRK12566 559 DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAA 638 (954)
T ss_pred CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhcc
Confidence 99999999999999999999999999999767889999999999999999999999999999989999999999999877
Q ss_pred CCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcce
Q 001990 728 RDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMG 807 (985)
Q Consensus 728 ~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G 807 (985)
++++++|++++||+.|++++|+++|+++||++|++++||++|++++.++..|+++|+|++++++||||+.|+|+|||++|
T Consensus 639 ~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG 718 (954)
T PRK12566 639 GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMG 718 (954)
T ss_pred CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccc
Confidence 78999999999999998875799999999999999999999999999998899999999999999999999999999999
Q ss_pred eeeecccccCcCCCCc-cccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q 001990 808 PIGVKKHLAPFLPSHP-VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (985)
Q Consensus 808 ~l~~~~~l~~~lpg~~-~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L 886 (985)
++.+++++.+++++.. +... +++.+..++++++ +|+++++.+||+|+..+|.+ +++..+.+..+++|++++|
T Consensus 719 ~iav~~~L~pfLp~~P~~d~~---G~~~r~ga~S~~~---~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL 791 (954)
T PRK12566 719 PIGVRAHLAPFVANHPVVPVE---GPDPNNGAVSAAP---WGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQL 791 (954)
T ss_pred hhhhhhhhhhhccCCCCcCCC---CCCCCCCceeecc---cchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHh
Confidence 9999998887776432 1111 1222344555555 56888899999999999999 9988888899999999999
Q ss_pred hccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHH
Q 001990 887 EKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQ 966 (985)
Q Consensus 887 ~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~ 966 (985)
.+++++.+.+++++++|++++++..++...|.+..+++++|.++||++++++||+++++||+||+++|++||| +|++
T Consensus 792 ~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEID---rf~e 868 (954)
T PRK12566 792 GGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELD---RFVE 868 (954)
T ss_pred HhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHH---HHHH
Confidence 8888887755445789999999875554456788999999999999998888899999999999999999999 9999
Q ss_pred HHHHHHHHHHH
Q 001990 967 ILLSLTKFTTF 977 (985)
Q Consensus 967 aL~~i~~~~~~ 977 (985)
+|+++.+|+.+
T Consensus 869 AL~~I~~e~~~ 879 (954)
T PRK12566 869 AMLSIRAEIGK 879 (954)
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 3
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=9.4e-165 Score=1481.68 Aligned_cols=866 Identities=59% Similarity=0.977 Sum_probs=798.7
Q ss_pred cCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCccceecCCCCCCCC
Q 001990 101 RHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTH 179 (985)
Q Consensus 101 ~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~~~lG~g~~~~~ 179 (985)
|||+|+++|+++||++||++|+||||+++||+++ ++++++|| +++||.|+++||++||++|+.+.+|+|+|+|||+
T Consensus 1 rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~ 77 (939)
T TIGR00461 1 RHLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNILKRRPLQLE---APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTI 77 (939)
T ss_pred CCCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCc
Confidence 8999999999999999999999999998899999 88889998 7899999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEE
Q 001990 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFI 259 (985)
Q Consensus 180 ~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vl 259 (985)
+|++|.|++++||+|||+|||||||+|||+||+++|||+|+|+||||+.+|+||+|++|+++||++|+.+.+++++++|+
T Consensus 78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vl 157 (939)
T TIGR00461 78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFF 157 (939)
T ss_pred CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999776544568999
Q ss_pred EcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccc
Q 001990 260 IASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL 338 (985)
Q Consensus 260 v~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~al 338 (985)
|++.+||+++.+++++++..|++++.+|.++|+. + ++++|++|+||++|.++|+++|++++|++|++++|++|++++
T Consensus 158 v~~~~hP~~~~v~~t~a~~~g~~v~~~~~~~l~~~~--~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 158 VAKDLHPQTKSVLHTRAKPFGIEVIVVDCSDIKKAV--DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred ECCCCCcchHHHHHHHHHhcCcEEEEEcHHHHhhcC--CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh
Confidence 9999999999999999999999999999988876 5 689999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCC
Q 001990 339 TILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (985)
Q Consensus 339 g~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~ats 418 (985)
+++++|++|||||+|+++|+||+||+|||||+|||+++++++|+||||+||+|+|.+|+++|+|+|||||||||||||||
T Consensus 236 ~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtS 315 (939)
T TIGR00461 236 TLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATS 315 (939)
T ss_pred CCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecC--CHHHHHHHHHHcC
Q 001990 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIE 496 (985)
Q Consensus 419 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~--~~~~l~~~L~~~G 496 (985)
||||++++++++|++|+.++|++||++++++++.+|+||+++|++.| +++..+++|++|+++++ .++++.++|.++|
T Consensus 316 NICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~g 394 (939)
T TIGR00461 316 NICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKTWFDTLTVKVGNGISSELLKAAEEFN 394 (939)
T ss_pred chhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCccceEEEEeCCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999987 99987789999999987 3889999999999
Q ss_pred ceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCccccccCCHHHHHHH
Q 001990 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRY 576 (985)
Q Consensus 497 i~~~~~~~~~lris~~~~~t~edid~ll~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~pv~~~~~se~e~~~~ 576 (985)
|+++...++.+++|+||++|++||+.|+++|...+......+.+...+...||++++|+++++.+|||++++||.|++||
T Consensus 395 i~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~ 474 (939)
T TIGR00461 395 INLRAVDTTTVGIALDETTTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRY 474 (939)
T ss_pred CeeeecCCCEEEEEeecCCCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHH
Confidence 99987666899999999999999999999996321100011111111112499999999999999999999999999999
Q ss_pred HHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCccceecCh
Q 001990 577 IHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNA 656 (985)
Q Consensus 577 l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~~~~~~s 656 (985)
+++|++||.+++++++++|+|||++|+..++.+++|++|.+||||||++++||++++++|+++|+|+++|++.+++++++
T Consensus 475 ~~~L~~kn~~~~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~a 554 (939)
T TIGR00461 475 LHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNS 554 (939)
T ss_pred HHHHHhcCCCccccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCch
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEE
Q 001990 657 GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (985)
Q Consensus 657 Ga~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi 736 (985)
|++||+++++++|.|++.+|+.+|++|++|.++||++|+++++.|+++++||++++|.+|+++|++++++++++|++|++
T Consensus 555 GA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~i 634 (939)
T TIGR00461 555 GAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMV 634 (939)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEE
Confidence 99999889999999999888767889999999999999999999999999999999999999999999866679999999
Q ss_pred EcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeeccccc
Q 001990 737 TYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (985)
Q Consensus 737 ~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~ 816 (985)
++||++|++++||++|+++||++|++++||+||++++.++.+|+++|+|+++++.||+|+.|+|+||||+|++++++++.
T Consensus 635 T~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 635 TYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred EeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 99999999985599999999999999999999998898888999999999999999999999999999999999999999
Q ss_pred CcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcC
Q 001990 817 PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRG 896 (985)
Q Consensus 817 ~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g 896 (985)
+++|++.++.+.+.. +++...+.+++.++|+++++.++|+||..+|.+|+++.++..+.+++|++++|++++++.+++
T Consensus 715 ~~lPg~~v~~t~d~~--greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~ 792 (939)
T TIGR00461 715 PFLPKHDVVSMITGI--GGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVG 792 (939)
T ss_pred hhcCCCcccccccCC--CCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccC
Confidence 999998876542210 122211223333567889999999999999999999999999999999999999888888876
Q ss_pred CCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 897 VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 897 ~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+.++++|+|+++++++++..|++..+++++|.++||+.++++||+.++++|+||+.+|++||| +|+++|.+|.+++.
T Consensus 793 ~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD---~f~~al~~I~~e~~ 869 (939)
T TIGR00461 793 TLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELD---RFCDAMIAIKEEIN 869 (939)
T ss_pred CCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHH---HHHHHHHHHHHHHH
Confidence 556789999999986555567889999999999999999888999999999999999999999 99999999999887
Q ss_pred H
Q 001990 977 F 977 (985)
Q Consensus 977 ~ 977 (985)
+
T Consensus 870 ~ 870 (939)
T TIGR00461 870 A 870 (939)
T ss_pred H
Confidence 5
No 4
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=9.3e-160 Score=1458.15 Aligned_cols=881 Identities=86% Similarity=1.336 Sum_probs=800.1
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCccccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCccceecC
Q 001990 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIG 172 (985)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~~~lG 172 (985)
.+.+.|..||||||++|+++||++||++|+||||+++||+++++++++||.+.+++||.|+++||++||.+|+.+.||+|
T Consensus 30 ~~~~~f~~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fiG 109 (993)
T PLN02414 30 KPSDTFPRRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYIG 109 (993)
T ss_pred ccccchhhccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCccccccC
Confidence 34567999999999999999999999999999997789999955578986333689999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhc
Q 001990 173 MGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQK 252 (985)
Q Consensus 173 ~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~ 252 (985)
+|+|+|++|++|.++++++++|||+|||||||+|||+||+++|||+++|+|+||+++|+||+|++|+++|+++|+.++.+
T Consensus 110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~ 189 (993)
T PLN02414 110 MGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILK 189 (993)
T ss_pred CCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhccc
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred CCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhccCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE
Q 001990 253 GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA 332 (985)
Q Consensus 253 ~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~ 332 (985)
+++++|||++.+||+++.+|++++++.|++++.+|.++....++++.++++|+||++|.+.|+++|+++||++|++++|+
T Consensus 190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iVa 269 (993)
T PLN02414 190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVMA 269 (993)
T ss_pred CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEEE
Confidence 46689999999999999999999999999999998755322345788899999999999999999999999999999999
Q ss_pred eccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccccccc
Q 001990 333 TDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (985)
Q Consensus 333 a~~~alg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~r 412 (985)
+|+++++.+++|+++||||+++++|+|++|++||||++|||++++++.+.+|||++||+.|.+|+++|+++||+||||||
T Consensus 270 ad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiR 349 (993)
T PLN02414 270 TDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIR 349 (993)
T ss_pred ECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhh
Confidence 99999999989999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred ccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCCHHHHHHHH
Q 001990 413 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAA 492 (985)
Q Consensus 413 re~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~L 492 (985)
||+|||||||++++++.++++|+.++|++|+++++++++++++|++++|.+.| +++..+++|++|+|+.+.+.++.++|
T Consensus 350 rEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~~f~~vt~~~~~~~~v~~~L 428 (993)
T PLN02414 350 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLPFFDTVKVKCSDADAIADAA 428 (993)
T ss_pred hcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCcCeEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887 99887788999999886688899999
Q ss_pred HHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCccccccCCHHH
Q 001990 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHE 572 (985)
Q Consensus 493 ~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~pv~~~~~se~e 572 (985)
.++||+++....+.+|+|+|++||++|||+|+++|...+......+.+...+...||+.++|+++++++|+|++++||.|
T Consensus 429 ~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~~ 508 (993)
T PLN02414 429 AKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEHE 508 (993)
T ss_pred HHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHHH
Confidence 99999998877788999999999999999999999743111101121211112249999999999999999999999999
Q ss_pred HHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCccce
Q 001990 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSL 652 (985)
Q Consensus 573 ~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~~~ 652 (985)
++||+++|+++|++++++||+|||||||+|+..++.+++|++|.+.|||+|.++.||+++++.++++++++++|++.+.+
T Consensus 509 ~~r~~~~l~~~~~~~~~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~v~f 588 (993)
T PLN02414 509 LLRYLHRLQNKDLSLVHSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDSFSL 588 (993)
T ss_pred HHHHHHHHhhcccccccCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeE
Q 001990 653 QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLS 732 (985)
Q Consensus 653 ~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~ 732 (985)
++|+|++|+++.+++++.|++.+|...|++||+|.++|+++++.+.+.|++++++|+|++|.+|+++|+++++++.++|+
T Consensus 589 ~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta 668 (993)
T PLN02414 589 QPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLA 668 (993)
T ss_pred cCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeE
Confidence 99999999999999999998777755677999999999999999999999999999999999999999999986556899
Q ss_pred EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeec
Q 001990 733 TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (985)
Q Consensus 733 ~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~ 812 (985)
+|++++||+.|.+..||++|+++||++|++++||++|+++++++..|+++|+|+++++.||||+.|+|+||||+|+++++
T Consensus 669 ~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~ 748 (993)
T PLN02414 669 ALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 748 (993)
T ss_pred EEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEc
Confidence 99999998766665479999999999999999999999999888899999999999999999999999999999999999
Q ss_pred ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001990 813 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (985)
Q Consensus 813 ~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i 892 (985)
+++.+++|++.++.+....++......+.+.++++|+++++.+||+|+..+|.+|+++..++++.+++|++++|.+++++
T Consensus 749 ~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~ 828 (993)
T PLN02414 749 KHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPV 828 (993)
T ss_pred hhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 99999999987654331111111111223333578899999999999999999999999999999999999999988888
Q ss_pred eEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 893 ~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.+.++.++++|+|+++++.+++..|++..+++++|.++||++++++||+++++||+||+++|++||| +|+++|+.+.
T Consensus 829 ~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelD---rf~~al~~i~ 905 (993)
T PLN02414 829 LFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELD---RFCDALISIR 905 (993)
T ss_pred cccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHH---HHHHHHHHHH
Confidence 8876656899999999876554456888999999999999999888999999999999999999999 9999999999
Q ss_pred HHHHH
Q 001990 973 KFTTF 977 (985)
Q Consensus 973 ~~~~~ 977 (985)
.|+.+
T Consensus 906 ~e~~~ 910 (993)
T PLN02414 906 EEIAD 910 (993)
T ss_pred HHHHH
Confidence 98874
No 5
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-155 Score=1428.13 Aligned_cols=867 Identities=61% Similarity=1.034 Sum_probs=796.9
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCccceec
Q 001990 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (985)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~~~l 171 (985)
.+.++|+.||||||++|+++||++||++|+||||+++||+++ ++++++|| +++||.|+++||++||++|+.+.+|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~~i 81 (954)
T PRK05367 5 ENSDAFARRHIGPSAADQQAMLAALGADSLDALIDQAVPASIRLAEPLDLP---AALSEAEALAELRAIASKNKVFRSYI 81 (954)
T ss_pred cccccccccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 456789999999999999999999999999999999999999 88889997 78999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhh
Q 001990 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (985)
Q Consensus 172 G~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~ 251 (985)
|+|+|+|++|++|.+++++||+|||+|||||||+|||+||+++|||+++|+|+||+++|+|+++++|+++|+++|++++.
T Consensus 82 g~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 82 GQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchh-hhccCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEE
Q 001990 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVV 330 (985)
Q Consensus 252 ~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~-l~~l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galli 330 (985)
++++++|||++.+||+++.+|+++++..|+++++++.++ +. ++++.+|++|+||++|.+.|+++|+++||++|++++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~~--~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~ 239 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKALD--HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVA 239 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCCC--cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEE
Confidence 333689999999999999999999999999999998643 22 457899999999999999999999999999999999
Q ss_pred EEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccccc
Q 001990 331 MATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQH 410 (985)
Q Consensus 331 V~a~~~alg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~ 410 (985)
|++++.+++++++|+++||||+++++|+|++|+++||||+|||+++++++++||||++||+.|.+|+++|+|++|+||||
T Consensus 240 vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqh 319 (954)
T PRK05367 240 VAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQH 319 (954)
T ss_pred EEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccc
Confidence 99998899999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred ccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC-HHHHH
Q 001990 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIA 489 (985)
Q Consensus 411 ~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~l~ 489 (985)
||||+|||||||+++++++++++|+.++|++|+++++++++.+++|++++|++.| +++..+++|++++++.+. +.++.
T Consensus 320 iRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~~f~~~~~~~~~~~~~i~ 398 (954)
T PRK05367 320 IRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDSFFDTLTVEVGGDAAAVL 398 (954)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCCCCCeEEEeCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998877 998877888999998864 89999
Q ss_pred HHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh----hccCCCCccCCCCCCCCcccc
Q 001990 490 SAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVFN 565 (985)
Q Consensus 490 ~~L~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~~~~~~~~~~~l~~~~----~~~ip~~~~~~~~~~~~pv~~ 565 (985)
++|.++||+++...++.+|+|+||++|++|||+|+++|+..+. ..+.+...+ ...||+.++|+++++.+|||+
T Consensus 399 ~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~ 475 (954)
T PRK05367 399 ARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFGGAAL---DVDALDADVADASASALPAALLRTSAYLTHPVFN 475 (954)
T ss_pred HHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHccccc---chhhhhhhhcccccccCCHHHhcCCcccCCcccC
Confidence 9999999999877678999999999999999999999984321 111111111 124999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHh
Q 001990 566 KYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (985)
Q Consensus 566 ~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~ 645 (985)
+++||.|++||+++|++||..++++||+||+|||++++..++.+++|++|.+||||||.|++||+++++.++++|+++++
T Consensus 476 ~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~elt 555 (954)
T PRK05367 476 RYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEIT 555 (954)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCCCHHHHHHHHH
Q 001990 646 GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAE 725 (985)
Q Consensus 646 G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~iDle~L~~~i~ 725 (985)
|++.+++++++|++||+++++++|.|+..+|..++++|++++++|+++++++.+.|+++++++++.+|.+|+++|+++++
T Consensus 556 G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~ 635 (954)
T PRK05367 556 GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAE 635 (954)
T ss_pred CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHh
Confidence 99988899999999999999999998877776567789999999999999999999999999999889999999999998
Q ss_pred hcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCc
Q 001990 726 ANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPG 805 (985)
Q Consensus 726 ~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg 805 (985)
++++++++|++++|++.|.+..||++|+++||++|+++|||+||..++.++..|+++|+|++++++||||+.|+|+||||
T Consensus 636 ~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg 715 (954)
T PRK05367 636 EHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPG 715 (954)
T ss_pred ccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCc
Confidence 65467999999999998988548999999999999999999999988888888999999999999999999999999999
Q ss_pred ceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 001990 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (985)
Q Consensus 806 ~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~ 885 (985)
+|++++++++.+++|++.++.+. ...++++++++++|+++.+.++|+|+..+|.+|+++..++++.+++|++++
T Consensus 716 ~G~l~vr~~l~p~lpg~~v~~~~------~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~ 789 (954)
T PRK05367 716 VGPIGVKAHLAPFLPGHPVQIAG------GETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKR 789 (954)
T ss_pred eEEEeecccccccCCCCccCcCC------CCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998654322 122345666667888888889999999999999999999999999999999
Q ss_pred HhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHH
Q 001990 886 LEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFF 965 (985)
Q Consensus 886 L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i 965 (985)
|++.+++.+.+++++++|+++++++.++...+++..+++++|.++||++++++||+++.+||++|+++|++||| +|+
T Consensus 790 L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elD---r~~ 866 (954)
T PRK05367 790 LKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELD---RFC 866 (954)
T ss_pred HHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHH---HHH
Confidence 98888888877666789999999865544446788999999999999998888999999999999999999999 999
Q ss_pred HHHHHHHHHHHH
Q 001990 966 QILLSLTKFTTF 977 (985)
Q Consensus 966 ~aL~~i~~~~~~ 977 (985)
++|+.+..++.+
T Consensus 867 ~al~~i~~e~~~ 878 (954)
T PRK05367 867 DAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 6
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-108 Score=882.85 Aligned_cols=435 Identities=55% Similarity=0.885 Sum_probs=409.7
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-cc--CCCCCCCCCCCCCHHHHHHHHHHHHcCCCccce
Q 001990 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RI--DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKS 169 (985)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~--~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~~ 169 (985)
.+.+.|+.|||+|+++|+++||++||++|+||||+++||+++ .+ ..+.+ |+++||.|+++++++++++|+.+.+
T Consensus 2 ~~~~~f~~rh~~P~~~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~---~~~~sE~e~l~~l~~ia~kN~~~~s 78 (450)
T COG0403 2 EPLDAFMARHIGPSSADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPL---PKPLSEYEALAELKEIASKNKVFTS 78 (450)
T ss_pred CccchhhhcCCCCChHHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCC---CCCCCHHHHHHHHHHHHhcCchhhh
Confidence 456789999999999999999999999999999998899999 44 22334 4889999999999999999999999
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhh
Q 001990 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN 249 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~ 249 (985)
|+|+|+|+|++|++|+|+|++||+|||+|||||||||||+||++||||+++|||||||++|+||||++||++|||+|+.|
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc----cCCCEeEEEEEcCCCCe-eeccHHHHHHHHHh
Q 001990 250 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY----KSGDVCGVLVQYPGTEG-EVLDYGDFIKNAHA 324 (985)
Q Consensus 250 ~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~----l~~~t~~V~v~~pn~~G-~i~dl~~I~~~a~~ 324 (985)
.+++++++|+|+..+||+++++++||++++|++++.++.++++. .+.++.+|++|+||++| .+.|+.+|.+.+|+
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~ 238 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHS 238 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhh
Confidence 87656899999999999999999999999999999998765543 24589999999999999 66789999999999
Q ss_pred CCcEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEec
Q 001990 325 NGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAM 404 (985)
Q Consensus 325 ~galliV~a~~~alg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l 404 (985)
+|++++|++|+++++++++|++|||||+||++|.||+||+|||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|
T Consensus 239 ~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaL 318 (450)
T COG0403 239 AGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLAL 318 (450)
T ss_pred cCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCC-CEEEcCCCCcceEEEecC
Q 001990 405 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCA 483 (985)
Q Consensus 405 ~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~ 483 (985)
||||||||||||||||||||+|+|++|++|+.++|++|++++++|+++++.||+++|++++ |+++..+.+|++|+++++
T Consensus 319 QTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~ 398 (450)
T COG0403 319 QTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVP 398 (450)
T ss_pred HHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999662 499987789999999998
Q ss_pred -C-HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 484 -D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 484 -~-~~~l~~~L~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
. ...+.++....||+++.++++.+.+|+||.+|++||+.|+++|+..
T Consensus 399 ~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 399 EEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hhHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 4 7777888878899999988889999999999999999999999853
No 7
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=6.5e-99 Score=843.68 Aligned_cols=425 Identities=44% Similarity=0.665 Sum_probs=327.9
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCccceecCCCCCCC
Q 001990 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNT 178 (985)
Q Consensus 100 ~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~~~lG~g~~~~ 178 (985)
+||||||++|+++||++||++|+||||+++||+++ ++++++|| +++||.|++||+++|+++|..+.+|+|+|+|+|
T Consensus 1 ~ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp---~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~ 77 (429)
T PF02347_consen 1 MRYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIRLKKPLNLP---EPLSEYELLRHLERLASKNKSYTSFIGAGSYTH 77 (429)
T ss_dssp -------HHHHHHHHHHCT-SSTGGGG-TTS-GGG-SS-------------HHHHHHHHHHHHTTS--TTS---CTTT--
T ss_pred CCCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhcCCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccccccccCc
Confidence 59999999999999999999999999966799999 88899998 689999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEE
Q 001990 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (985)
Q Consensus 179 ~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~V 258 (985)
++|++|.+++++|++|||+|||||||+|||+||++||||+|||+|||||.+|+|+||++||++||++|+.+.+++++++|
T Consensus 78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~v 157 (429)
T PF02347_consen 78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKV 157 (429)
T ss_dssp ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EE
T ss_pred eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEE
Confidence 99999997799999999999999999999999999999999999999999999999999999999999998875556799
Q ss_pred EEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEecccc
Q 001990 259 IIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA 337 (985)
Q Consensus 259 lv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~a 337 (985)
+|++..||++..+++++++..|++++.++.++-.. .++++++|++|+||++|.++|+++|++++|++|+++++++|+++
T Consensus 158 lv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~a 237 (429)
T PF02347_consen 158 LVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIVGADPNA 237 (429)
T ss_dssp EEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEECGGCCG
T ss_pred EEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEEecCHHH
Confidence 99999999999999999999999999998754322 25789999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccC
Q 001990 338 LTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (985)
Q Consensus 338 lg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~at 417 (985)
++++++|++|||||+|+++|+||+||++||||+|||+++++++|+||||+||.|+|.+|+++|+|+||||||||||||||
T Consensus 238 L~~l~~Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 238 LGGLKSPGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp CCTC--GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred HhCcCChhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC--HHHHHHHHHHc
Q 001990 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKI 495 (985)
Q Consensus 418 sni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~l~~~L~~~ 495 (985)
|||||+|++++++|++|+.++|++||+++++++..+|+|++++|+++.++.+.+..++++|.+..+. ..++.+++...
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~ 397 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEG 397 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT---
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999742444345666677666554 33455555555
Q ss_pred CceeeeecCCeEEEEeccCCCHHHHHHHHHHH
Q 001990 496 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVF 527 (985)
Q Consensus 496 Gi~~~~~~~~~lris~~~~~t~edid~ll~~l 527 (985)
|+.++....+++++|+||.+|++|||+|+++|
T Consensus 398 gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 398 GLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 66665555679999999999999999999876
No 8
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-79 Score=656.67 Aligned_cols=414 Identities=59% Similarity=1.022 Sum_probs=381.3
Q ss_pred CCCCCcccccc-----CCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHH
Q 001990 557 PYLTHPVFNKY-----HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQ 631 (985)
Q Consensus 557 ~~~~~pv~~~~-----~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~ 631 (985)
.+|++|+|+.. +||.|++||+.+|+++|+.++++|++||||||++|+..++.++.|++|.+.|||+|+++.||++
T Consensus 29 ~~L~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l 108 (496)
T COG1003 29 EYLPHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYL 108 (496)
T ss_pred hhcCcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHH
Confidence 56666666666 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~ 711 (985)
+++.++++||++++|+|.+++++++|++||++++++||+|++++|+..|++||+|+++||+||+++.+.|++|+.|++++
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999987899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCC
Q 001990 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNL 791 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~ 791 (985)
+|.+|+++|+++++ ++++++|+||||++|+|+++|.+|++++|++|.+|++|||+.+++.|+.+||++|+||+++++
T Consensus 189 ~G~VDlddLk~k~~---~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 189 NGNVDLDDLRAKAE---DNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCccHHHHHHHhc---cceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeec
Confidence 99999999999998 899999999999999999899999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCcceeeeecccccCcCCCCccccCCCC--CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHH
Q 001990 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI--PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (985)
Q Consensus 792 hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~--~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~ 869 (985)
||||+.|||+||||+|.++++.++.+++|+...-..... ......+.. ...+++||+++++..+|+|+..+|.+|++
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~-g~~~a~~Gs~~il~~a~~YI~~mG~~GL~ 344 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSI-GVSAAPYGSASILPIAWAYIRMMGADGLK 344 (496)
T ss_pred ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccc-eeeccccCcchHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999998431000100 001111222 33456899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCC--CCCEEEE
Q 001990 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--VPGTLMI 947 (985)
Q Consensus 870 ~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~p--v~~~lri 947 (985)
+..+..+.+++|++++|++.+++.+.+.+ ++.|+||++.+++++..|++..+++++|.++|+++++++|| |+++|+|
T Consensus 345 ~ase~AvLNANYia~rL~~~y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMI 423 (496)
T COG1003 345 QASEVAVLNANYIARRLKGYYPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMI 423 (496)
T ss_pred HHHHHHHHhHHHHHHHhhhcCccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceee
Confidence 99999999999999999998888887643 68999999998777778999999999999999999999999 9999999
Q ss_pred eccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 948 EPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 948 s~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
.||+..+++|+| +|+++|.+|.+++++.
T Consensus 424 EPTEsEsk~eLD---rf~dami~I~~Ea~~~ 451 (496)
T COG1003 424 EPTESESKEELD---RFIDAMIAIREEADAV 451 (496)
T ss_pred cCCCCCCHHHHH---HHHHHHHHHHHHHHhc
Confidence 999999999999 9999999999998865
No 9
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=8.6e-58 Score=512.24 Aligned_cols=403 Identities=33% Similarity=0.507 Sum_probs=287.6
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCccccccCCHHHHHHHHHHHhcCccCcCccccc
Q 001990 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (985)
Q Consensus 514 ~~t~edid~ll~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~ 593 (985)
-+|++|++++++.++.. |+|||+. .+||+++|+++++ .+| +++||.|++|++++++++|.. ..++++
T Consensus 5 ~~t~~~~~~ML~~iG~~-----sieeL~~---~~IP~~i~~~~~~-~lp---~~~sE~e~~r~~~~la~kN~~-~~~fiG 71 (429)
T PF02347_consen 5 PPTDEDIQEMLDAIGVK-----SIEELFD---SDIPEEIRLKKPL-NLP---EPLSEYELLRHLERLASKNKS-YTSFIG 71 (429)
T ss_dssp ---HHHHHHHHHHCT-S-----STGGGG----TTS-GGG-SS--------------HHHHHHHHHHHHTTS---TTS---
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHhhcCCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCcccc
Confidence 46899999999999987 8999983 4799999999875 777 679999999999999999987 677889
Q ss_pred ccceecccCccccccccccccccc-cCCCCcchhhhcHHHHHHHHHHHHHHHhCCCcc--ceecChHHHHHHHHHHHHHH
Q 001990 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 670 (985)
Q Consensus 594 lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~--~~~~~sGa~g~~a~l~air~ 670 (985)
+|+|++++|+......+++++|++ |||||| |++||++|+++|+++++|+|+|+|.+ ++++.+|+.|+ +++|+.|.
T Consensus 72 ~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aE-a~~ma~r~ 149 (429)
T PF02347_consen 72 AGSYTHYVPAVIDRNILSRPEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAE-AMLMAVRA 149 (429)
T ss_dssp CTTT-----HHHHH-HHCCHHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHH-HHHHHHHH
T ss_pred ccccCceeChhhcCccccChhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHH-HHHHHHHh
Confidence 999999999988886689999988 999999 99999999999999999999999985 57888899888 88888775
Q ss_pred HHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc
Q 001990 671 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (985)
Q Consensus 671 ~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~ 746 (985)
. + .++++|+++++.|+.+.+. +...|++++.++.++++..| + +++++|++++||++|+++
T Consensus 150 ~---~--~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~---~~~a~v~vq~Pn~~G~~e 213 (429)
T PF02347_consen 150 T---K--RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D---DDTAAVMVQNPNTFGVFE 213 (429)
T ss_dssp H---T--T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S---TTEEEEEEESS-TTSB--
T ss_pred c---c--cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c---cCeEEEEeecCCCCceEe
Confidence 3 1 2356899999999888764 44689999999998888877 3 899999999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCcccc
Q 001990 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (985)
Q Consensus 747 ~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~ 826 (985)
|+++|++++|++|+++++ ++++++++++.+||++|+||++++ ||+|+.|+++|||+.|++++++++.+++||+++|.
T Consensus 214 -d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~ 290 (429)
T PF02347_consen 214 -DIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQ 290 (429)
T ss_dssp -THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEE
T ss_pred -eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecc
Confidence 799999999999999999 999999999999999999999776 89999999999999999999999999999999987
Q ss_pred CCCC-------------CCC-CCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001990 827 TGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (985)
Q Consensus 827 ~~~~-------------~~~-~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i 892 (985)
+.|. ++| +|+++|+|+|++ +++.+..|++|+..+|++|++++++++..+++|++++|++.+.+
T Consensus 291 t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn---qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~ 367 (429)
T PF02347_consen 291 TKDADGKRAFVLTLQTREQHIRREKATSNICTN---QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGL 367 (429)
T ss_dssp EEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBE
T ss_pred cccccccceeeeccccccccccccchhhhhhhh---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6432 122 478999999986 77888889999999999999999999999999999999885444
Q ss_pred eEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC-CCCCCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 893 ~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~-~~~pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
.+.+ .+++++++... + + ..+. .|.++++..+. ..++..+.+.||+|+.+|+|||| +|+++|
T Consensus 368 ~~~~---~~f~e~v~~~~------~-~-~~~~-~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid---~lv~~f 429 (429)
T PF02347_consen 368 PFDN---PFFFEFVVVFS------K-D-KEVE-ELLKRGIEGGLNLRYPDDGALLICVTETRTKEDID---RLVEAF 429 (429)
T ss_dssp CSSS---SSBSSEEEEES------S---HHHH-HHHHTT----EEEGGG-SSEEEEE--TT--HHHHH---HHHH--
T ss_pred ccCC---CCceeeeeecC------C-c-HHHH-HHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHH---HHHhcC
Confidence 4432 34555666553 1 1 3332 36666665441 12344579999999999999999 998875
No 10
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=1.9e-55 Score=517.63 Aligned_cols=424 Identities=38% Similarity=0.622 Sum_probs=377.5
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCc---cceecCCC
Q 001990 99 ARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMG 174 (985)
Q Consensus 99 ~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~---~~~~lG~g 174 (985)
.++|||++++|+++||+++|++|+||||+ +||+++ ++.+++|| +++||.++++++.+++++|.. ..+++|.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g 76 (447)
T PRK00451 1 GMPYIPHTEEDIREMLDAIGVKSIDELFA-DIPEELRLKRPLDLP---PGLSEMELLRHLRELAAKNKTAEEYPSFLGAG 76 (447)
T ss_pred CCCCCCCCHHHHHHHHHHhCCCCHHHHHH-hCCHHHHhCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccCccc
Confidence 37899999999999999999999999996 599999 77788898 567999999999999987754 56799999
Q ss_pred CCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCC
Q 001990 175 YYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK 254 (985)
Q Consensus 175 ~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~ 254 (985)
++++.+|..+. .++.+++|+++|+||+++.++|.++++.|+++++++++|++.+++++++|+|++++++++++... +
T Consensus 77 ~~~~~~p~~~~-~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--~ 153 (447)
T PRK00451 77 AYDHYIPAVVD-HIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--K 153 (447)
T ss_pred ccCCcCcHHHH-HHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--C
Confidence 99999999985 77788899999999999999999999999999999999999989999999999999998887544 7
Q ss_pred CCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch-------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCC
Q 001990 255 KKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANG 326 (985)
Q Consensus 255 g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~-------~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~g 326 (985)
|++|++++..|+++..+++.+++..|++++.++.+ ++++ ++++|++|++++||++|.+.|+++|+++||++|
T Consensus 154 g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~ 233 (447)
T PRK00451 154 RKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGG 233 (447)
T ss_pred CCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCC
Confidence 89999999999999999988787789999988653 3555 788999999999999999999999999999999
Q ss_pred cEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccc
Q 001990 327 VKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (985)
Q Consensus 327 alliV~a~~~alg~l~~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~t 406 (985)
++++|+.|.+++|.+..++++|+|++++++|+|+.|+.+|||++||+++++++++.+|++++|++.+..++.+|.+.++.
T Consensus 234 ~~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (447)
T PRK00451 234 ALFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQA 313 (447)
T ss_pred CEEEEEcChHHhccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccc
Confidence 99998667778888878899999999999999999999999999999999999999999999998766677788888888
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC-H
Q 001990 407 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-A 485 (985)
Q Consensus 407 re~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~ 485 (985)
+++++||+++|+|+|++.++.++.++.++.+++++|++++.+++.+++++++++|++++|++++..+++..+.++++. .
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~ 393 (447)
T PRK00451 314 REQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPA 393 (447)
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCH
Confidence 999999999999999999888888887888899999999999999999999999999865988755556666666543 7
Q ss_pred HHHHHHHHHcCceee----eec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 486 HAIASAAYKIEMNLR----VVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 486 ~~l~~~L~~~Gi~~~----~~~---~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.++.++|.++||... ... .+.+|+|+++++|++|+++|+++|..
T Consensus 394 ~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 394 EEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred HHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 899999999988632 111 36899999999999999999999963
No 11
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=3.7e-54 Score=521.28 Aligned_cols=403 Identities=19% Similarity=0.245 Sum_probs=342.4
Q ss_pred CCHHHHHHHHHHhC-CC--CH--H---HhhhhcCCCcc-ccCCCCCC-CCCCCCCHHHHHHHHHHHHcCCCcc-ceecCC
Q 001990 105 ATPEDQAKMSELVG-LD--NL--D---SLIDATVPKSI-RIDSMKFS-KFDEGLTESQMIEHMQKLASMNKVY-KSFIGM 173 (985)
Q Consensus 105 ~~~~~~~~ml~~~g-~~--~~--~---~l~~~~ip~~~-~~~~~~lp-~~~~~~se~e~~~~~~~~~~~n~~~-~~~lG~ 173 (985)
+|.+|++..++.++ .+ .+ + +-....||+++ |++++.+| .|..-.||.|++|||++|++||... .+|+|+
T Consensus 413 ~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~L~~kn~~~~~~fi~l 492 (939)
T TIGR00461 413 TTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRYLHRLESKDLALNNSMIPL 492 (939)
T ss_pred CCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHHHHHHHhcCCCccccCCCC
Confidence 68899999999995 32 11 1 11222499999 88888776 1122229999999999999999874 589999
Q ss_pred CCCCCCCcHHHHHHHHhCCccccccCCChhh-HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH-HHHHhhhh
Q 001990 174 GYYNTHVPPVILRNIMENPAWYTQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA-MAMCNNIQ 251 (985)
Q Consensus 174 g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e-~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea-~~~a~~~~ 251 (985)
|.|.|.+|+.+....+++++|+| ||||||| .+||+||+++|+|+|+|++|||| ++|+|+++++.+|+ .+|+.|..
T Consensus 493 Gsctmk~na~v~~l~~s~~ef~t-~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~aiR~y 569 (939)
T TIGR00461 493 GSCTMKLNATAEMMPITWPEFSN-IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AISLQPNSGAQGEYAGLRVIRSY 569 (939)
T ss_pred ccCCCccCHHHHHHHhcchhhcC-cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--CcccCCchHHHHHHHHHHHHHHH
Confidence 99999999999854489999999 9999999 99999999999999999999999 59999999999997 67777641
Q ss_pred ---c--CCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCCCCeeecc
Q 001990 252 ---K--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTEGEVLD 314 (985)
Q Consensus 252 ---~--~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~---~~t~~V~v~~pn~~G~i~d 314 (985)
+ +++++|++|...|.++-+.+ +..|+++++++. ++|++ ++ ++|++|++|+||++|.++|
T Consensus 570 ~~~rge~~R~~vlip~saHgtnPasa----~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~ 645 (939)
T TIGR00461 570 HESRGENHRNICLIPVSAHGTNPASA----AMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEP 645 (939)
T ss_pred HHhcCCCCCCEEEEEccccCcCHHHH----HHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecc
Confidence 1 25678999999996554443 345888888754 45665 64 5899999999999999987
Q ss_pred -HHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeee
Q 001990 315 -YGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 391 (985)
Q Consensus 315 -l~~I~~~a~~~galliV-~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s 391 (985)
+++|+++||++|++++| ++|+.+++.+.+|+++|||+++++. |+|++|+++||||+|++++++++.++||++.+|.+
T Consensus 646 ~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t 725 (939)
T TIGR00461 646 TIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSM 725 (939)
T ss_pred cHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCccccc
Confidence 99999999999999999 7898889889999999999999998 88999999999999999999999999999998865
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC
Q 001990 392 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG 471 (985)
Q Consensus 392 ~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~ 471 (985)
.|.+| |+|||+ ++||+|+++++.++.+.+|+..+|++|++++.+....+|+|++++|++ + ++++.
T Consensus 726 ~d~~g----------req~Ig---a~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~-~~~l~ 790 (939)
T TIGR00461 726 ITGIG----------GSKSIG---SVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-H-YPILF 790 (939)
T ss_pred ccCCC----------Cccccc---cccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-c-Ccccc
Confidence 44322 678886 789999999999999999999999999999999999999999999988 4 77653
Q ss_pred -C---CCcceEEEecC-------C-HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 472 -L---PFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 472 -~---~~~~~~~i~~~-------~-~~~l~~~L~~~Gi~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +++++|+++.+ . +.+|+++|.++|+..... ..+++++++||.+|++|||+|++++..
T Consensus 791 ~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~ 863 (939)
T TIGR00461 791 VGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIA 863 (939)
T ss_pred cCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHH
Confidence 2 57899998876 2 899999999999976443 247999999999999999999999974
No 12
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=8.9e-53 Score=495.46 Aligned_cols=381 Identities=20% Similarity=0.302 Sum_probs=322.2
Q ss_pred hhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCc-cceecCCCCCCCCCcHHHHHHHHhCCccccccCCChh
Q 001990 126 IDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA 203 (985)
Q Consensus 126 ~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~-~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~ 203 (985)
.+++||+++ ++++++|| + +||.|+++|+++|+++|.. ..+|+|.|++...+|+.+.++++++++| ++||||||
T Consensus 30 ~~~~ip~~~~~~~~~~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~ 104 (481)
T PRK04366 30 LESLLPEELLRKEPPELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQP 104 (481)
T ss_pred ccccCCHHHhcCCCCCCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCC
Confidence 345799999 88889998 4 9999999999999999987 5699999976766777777899999998 59999999
Q ss_pred h-HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHH-hh---hhcC--CCCEEEEcCCCChhHHHHHHHhh
Q 001990 204 E-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NN---IQKG--KKKTFIIASNCHPQTIDICITRA 276 (985)
Q Consensus 204 e-~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a-~~---~~~~--~g~~Vlv~~~~h~s~~~~~~~~a 276 (985)
| ++||+++.++++|+++++++|++ ++++++++++..+++.++ .+ ..++ ++++||+++..||++..+++
T Consensus 105 e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~--- 179 (481)
T PRK04366 105 EETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA--- 179 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH---
Confidence 9 99999999999999999999997 588998887766665432 22 1211 34599999999999998864
Q ss_pred cCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcCCCCeee-ccHHHHHHHHHhCCcEEEE-Eecccc-ccCCCCC
Q 001990 277 DGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVM-ATDLLA-LTILKPP 344 (985)
Q Consensus 277 ~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~pn~~G~i-~dl~~I~~~a~~~galliV-~a~~~a-lg~l~~p 344 (985)
..|++++.++. ++|++ ++++|++|++++||++|.+ .|+++|+++||++|++++| ++|+.+ +|.+ +|
T Consensus 180 -~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~ 257 (481)
T PRK04366 180 -MAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKA-RP 257 (481)
T ss_pred -HcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccC-Cc
Confidence 46888888765 34555 7889999999999999988 5899999999999999999 677666 4444 78
Q ss_pred CcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccch
Q 001990 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (985)
Q Consensus 345 ~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~ 423 (985)
+++|||++++++ |+|++|+++||||+||+++++++.++||++++|+ +|+ +|++++| |+|||||+++|+ +
T Consensus 258 ~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~----~g~-~~~l~~~-r~~~i~r~~a~t----~ 327 (481)
T PRK04366 258 GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK----DGD-RYRLDYD-RPKSIGRVRAFY----G 327 (481)
T ss_pred cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec----cCC-ceeeccc-ccccCCCccccc----C
Confidence 999999999999 9999999999999999999999999999999984 245 6999998 999999999885 3
Q ss_pred hHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CCCCcceEEEecC-----C--HHHHHHHHHHc
Q 001990 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA-----D--AHAIASAAYKI 495 (985)
Q Consensus 424 ~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~~~~~i~~~-----~--~~~l~~~L~~~ 495 (985)
+.+.++.+..|+.++|++|++++++++.++++||+++|+++ +++. +.++++++.+..+ + +.++.++|.++
T Consensus 328 ~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~ 405 (481)
T PRK04366 328 NFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDY 405 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHC
Confidence 56778888889999999999999999999999999999986 3332 3455667766542 2 78999999999
Q ss_pred Cceeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 496 EMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 496 Gi~~~~-----~~~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
||+++. ...+++|+|+|++||++|||+|+++|...
T Consensus 406 Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i 445 (481)
T PRK04366 406 GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI 445 (481)
T ss_pred CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence 998752 13578999999999999999999999753
No 13
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-50 Score=438.88 Aligned_cols=408 Identities=23% Similarity=0.325 Sum_probs=334.5
Q ss_pred CHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCC-CCCCCCccccccCCHHHHHHHHHHHhcCccCcCcccccc
Q 001990 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRE-SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (985)
Q Consensus 516 t~edid~ll~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~-~~~~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~l 594 (985)
..+|.+.++++++.+ |+|+|+. ++||+++|.+ ..++.+ ++++||.|+++++++++++|..+ .+.|..
T Consensus 15 ~~~d~~~ML~~iG~~-----Sld~L~~---~~IP~~Ir~~~~~~~~~---~~~~sE~e~l~~l~~ia~kN~~~-~sfiG~ 82 (450)
T COG0403 15 SSADQQEMLAAIGVS-----SLDELFS---QDIPPSIRKKLDTLLPL---PKPLSEYEALAELKEIASKNKVF-TSFIGA 82 (450)
T ss_pred ChHHHHHHHHHcCCC-----CHHHHhh---ccCCHHHHhcccccCCC---CCCCCHHHHHHHHHHHHhcCchh-hhhccC
Confidence 348999999999988 9999984 5799999865 122233 47899999999999999999732 345556
Q ss_pred cceecccCccccccccccccccc-cCCCCcchhhhcHHHHHHHHHHHHHHHhCCCccc--eecChHHHHHHHHHHHHHHH
Q 001990 595 GSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS--LQPNAGAAGEYAGLMVIRAY 671 (985)
Q Consensus 595 Gs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~~--~~~~sGa~g~~a~l~air~~ 671 (985)
|++..++|+......+++++|++ |+|||| |++||.+|++.|+|+++++|+|++.++ ++..+++.|| |++|+.|.
T Consensus 83 GyY~~~~P~vI~rnile~pewyTaYTPYQp-EISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE-Am~ma~r~- 159 (450)
T COG0403 83 GYYDTYTPPVILRNILENPEWYTAYTPYQP-EISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE-AMLMAKRV- 159 (450)
T ss_pred cccCCcCcHHHHHHhhcCccccccCCCCch-hhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH-HHHHHHHh-
Confidence 67778888777756678999999 999999 999999999999999999999999854 6666666666 88887664
Q ss_pred HHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccc
Q 001990 672 HKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEE 747 (985)
Q Consensus 672 ~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~ 747 (985)
.+ .++++++++...|..+-.. ++..|++++.++.+ |+++|+++ + ..++.+|++++||++|.+.+
T Consensus 160 --~k--~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~ 227 (450)
T COG0403 160 --TK--KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-D--DGDVFGVLVQYPNTFGIVEE 227 (450)
T ss_pred --hc--CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-c--ccCeEEEEEecCCCCCccch
Confidence 22 2468899999866544333 34578999888875 88899888 4 26899999999999995555
Q ss_pred CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccC
Q 001990 748 GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (985)
Q Consensus 748 di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~ 827 (985)
|+++|.+.+|++|++++| ++...+++.+..||++|+||+++++ +-|++|+|||||+.|++++++++.+++|||++|.+
T Consensus 228 d~~~l~~~~h~~~al~~v-~aDplaL~LL~pPGe~GADIvvG~~-QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S 305 (450)
T COG0403 228 DLRALIEAAHSAGALVIV-AADPLALGLLKPPGEFGADIVVGSA-QRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVS 305 (450)
T ss_pred hHHHHHHHHhhcCCEEEE-EechhHhhccCCccccCCceEEecC-cccCCCcCCCCcceeeeeEhHhHhhcCCCceeeee
Confidence 899999999999999998 7888899999999999999999998 67999999999999999999999999999999987
Q ss_pred CCC-------------CCC-CCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cC
Q 001990 828 GGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HY 890 (985)
Q Consensus 828 ~~~-------------~~~-~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~ 890 (985)
.|. ++| +|+++|+|||++ +++.+.+|..|+.++|++|+++++++++..+.+|+++|++ ++
T Consensus 306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~ 382 (450)
T COG0403 306 VDAAGKRAFRLALQTREQHIRREKATSNICTN---QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGV 382 (450)
T ss_pred ecCCCCchhhhhHHHHHHHHhhhccchhhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCce
Confidence 653 222 578999999986 8888888999999999999999999999999999999995 35
Q ss_pred CeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 891 PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 891 ~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
++.. +.+++++.+.+. ......+.++....|+....+. ++.+.+|+++.+|++||+ .|++++..
T Consensus 383 ~~~~----~~fFdt~~v~~~------~~~~~~l~~~~~~~G~~L~~~~---~~~~~ia~tEt~t~~~i~---~l~~~~~~ 446 (450)
T COG0403 383 ELVF----DHFFDTFTVRVP------EEVAEALLAAAIAGGINLRRVD---ADTVLIALTETTTKEDID---ALVAAFGG 446 (450)
T ss_pred Eecc----ccceeeEEEecc------hhHHHHHHHHHHhcCCceeeec---CCceEEEeecccCHHHHH---HHHHHHhh
Confidence 5543 257788888864 1224455556566677665433 368999999999999999 99988875
Q ss_pred H
Q 001990 971 L 971 (985)
Q Consensus 971 i 971 (985)
.
T Consensus 447 ~ 447 (450)
T COG0403 447 V 447 (450)
T ss_pred h
Confidence 4
No 14
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-49 Score=478.06 Aligned_cols=393 Identities=17% Similarity=0.246 Sum_probs=326.2
Q ss_pred CCHHHHHHHHHHhC-CC---CHHHh----hhhcCCCcc-ccCC-CCCCCCCCCCCHHHHHHHHHHHHcCCCc---cceec
Q 001990 105 ATPEDQAKMSELVG-LD---NLDSL----IDATVPKSI-RIDS-MKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFI 171 (985)
Q Consensus 105 ~~~~~~~~ml~~~g-~~---~~~~l----~~~~ip~~~-~~~~-~~lp~~~~~~se~e~~~~~~~~~~~n~~---~~~~l 171 (985)
.|.+|+++.++.++ .+ +.+.+ +...||+.+ |+.+ +.+|.|...+||.|++||+++|+++|.. ...|+
T Consensus 426 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~~~SE~el~r~~~~La~kn~~~~~~~~~L 505 (954)
T PRK12566 426 CDEATVARLFDIFLGADHGLDVAALDQGALAEGIPAVLQRRTAYLQHPVFNAHHSETEMLRYLKQLENKDLALNQSMIPL 505 (954)
T ss_pred CCHHHHHHHHHHhcCCCcccchhhhccccccccCchhhhcCCccccCcccccCCCHHHHHHHHHHHHhcCcCcccCcccC
Confidence 36799999999994 32 12222 122499999 7776 6778777889999999999999999976 34699
Q ss_pred CC-----CCCCCCCcHHHHHHHHhCCccccccCCChh-hHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHH-HH
Q 001990 172 GM-----GYYNTHVPPVILRNIMENPAWYTQYTPYQA-EIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE-AM 244 (985)
Q Consensus 172 G~-----g~~~~~~p~~v~~~i~~~~~~~t~~~py~~-e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~e-a~ 244 (985)
|+ |.|.|++|+ +++||+|. ||||| |.+||+||.++|+|+++|+||||+. +|+++++++.+| |.
T Consensus 506 GsCTmK~n~~~~~~p~-------s~~eF~t~-hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~--~Sl~p~sGA~gE~A~ 575 (954)
T PRK12566 506 GSCTMKLNATSEMIPI-------TWPEFAQL-HPFAPREQAEGYRAMIDELEAWLCAITGFDA--ICMQPNSGAQGEYAG 575 (954)
T ss_pred cccccCcCcHHhhhcc-------cchhhhcC-CCCCchhhhcCHHHHHHHHHHHHHHHHCCCe--EeecCCchHHHHHHH
Confidence 99 999999998 68999999 99999 7999999999999999999999999 699999999999 88
Q ss_pred HHHhhh---hc--CCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCC
Q 001990 245 AMCNNI---QK--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPG 307 (985)
Q Consensus 245 ~~a~~~---~~--~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~---~~t~~V~v~~pn 307 (985)
+|+++. .+ ..+++||++..+|.++...+ ...|++++.++. ++|++ ++ +++++|++|+||
T Consensus 576 Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa----~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pn 651 (954)
T PRK12566 576 LLAIRRYHRSRGQSQRDICLIPSSAHGTNPASA----QMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPS 651 (954)
T ss_pred HHHHHHHHHhcCCCCCCEEEecccccccCHHHH----HHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecC
Confidence 888774 11 25789999999997765553 346899988865 35655 54 789999999999
Q ss_pred CCeeec-cHHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCC
Q 001990 308 TEGEVL-DYGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (985)
Q Consensus 308 ~~G~i~-dl~~I~~~a~~~galliV-~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (985)
+.|.++ |+++|+++||++|++++| ++|+++++.+..|+++||||+++++ |+|++|+++|||++|++++++.+.+.+|
T Consensus 652 t~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp 731 (954)
T PRK12566 652 THGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVA 731 (954)
T ss_pred cCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhcc
Confidence 998876 499999999999999888 7898888888889999999999997 9999999999999999999996665554
Q ss_pred CceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC
Q 001990 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (985)
Q Consensus 385 ~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 464 (985)
+.- | +|.+|++ .|++++||+|+++++.+..|.+|+..+|++ +++.++.+..+|+|++++|.+
T Consensus 732 ~~P-~--~d~~G~~-------------~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~- 793 (954)
T PRK12566 732 NHP-V--VPVEGPD-------------PNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGG- 793 (954)
T ss_pred CCC-C--cCCCCCC-------------CCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh-
Confidence 221 1 2333332 147899999999999999999999999999 999999999999999999987
Q ss_pred CCEEEc-CC---CCcceEEEecC-------C-HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 465 GTVEVQ-GL---PFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 465 g~~~~~-~~---~~~~~~~i~~~-------~-~~~l~~~L~~~Gi~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+ +.+. .. ++++++.+... . +.+++++|.++||..... ..+++|+|+||+++++|||+|+++|..
T Consensus 794 ~-~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~ 872 (954)
T PRK12566 794 A-FPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLS 872 (954)
T ss_pred h-CCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHH
Confidence 3 5543 22 56788887654 2 688999999999986543 268999999999999999999999975
Q ss_pred C
Q 001990 530 G 530 (985)
Q Consensus 530 ~ 530 (985)
.
T Consensus 873 I 873 (954)
T PRK12566 873 I 873 (954)
T ss_pred H
Confidence 3
No 15
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=5.9e-49 Score=463.03 Aligned_cols=410 Identities=45% Similarity=0.781 Sum_probs=340.6
Q ss_pred ccCCCCccCCCCCCCCccccccCCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcch
Q 001990 546 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPAD 625 (985)
Q Consensus 546 ~~ip~~~~~~~~~~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e 625 (985)
.+||+++|+++++ .+| + +||.|+++++++++++|...+.+++++|+|++++++.......++++|.+||||||+.
T Consensus 32 ~~ip~~~~~~~~~-~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~ 106 (481)
T PRK04366 32 SLLPEELLRKEPP-ELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEE 106 (481)
T ss_pred ccCCHHHhcCCCC-CCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChh
Confidence 4799999999886 677 4 9999999999999999988777888999999888887666666778898999999944
Q ss_pred hhhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEE
Q 001990 626 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (985)
Q Consensus 626 ~~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~ 705 (985)
.+||.++++.++++++++++|++.+.+.+++|+.++..++.+++.+...+|..++++||+++..|+.+...++..|++++
T Consensus 107 ~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv 186 (481)
T PRK04366 107 TVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVV 186 (481)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEE
Confidence 99999999999999999999999777888888887755545455544344433456899999999998888899999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCc
Q 001990 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (985)
Q Consensus 706 ~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~D 785 (985)
.+|++.++.+|+++|+++++ ++|++|++++||++|++..|+++|+++||++|++++||+||+.++.+...++++|+|
T Consensus 187 ~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD 263 (481)
T PRK04366 187 EIPSNEDGLVDLEALKAAVG---EDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFD 263 (481)
T ss_pred EeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCC
Confidence 99998889999999999997 789999999999999883379999999999999999999998776555578999999
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC----CCC----CCCCCCCCcccccchhhhHHHHHH
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI----PAP----EKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~----~~~----~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
++++++||||+.|+|+||||+|++++++++.+++|+++++..+.. .++ ++.+++ .++.+.+.++|
T Consensus 264 ~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~-------t~~~l~~~~a~ 336 (481)
T PRK04366 264 VVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAF-------YGNFGVLVRAY 336 (481)
T ss_pred EEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccc-------cCchHHHHHHH
Confidence 999999999999999999999999999999999998876532211 111 122222 12456778899
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC
Q 001990 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (985)
Q Consensus 858 a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~ 937 (985)
.++..+|.+|++++.+++..+++||+++|++.+++.+. .++++++++++..+. ..+.+..++.++|.++||+++..
T Consensus 337 ~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~-~~g~~~~~v~~~L~~~Gi~~~~~ 412 (481)
T PRK04366 337 AYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPYD---RPCMHEFVLSGKKLK-ETGVRTLDIAKRLLDYGFHPPTI 412 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccCC---CCeeEEEEEECcccc-ccCCCHHHHHHHHHHCCccCCcc
Confidence 99999999999999999999999999999886555442 246678888754221 12567899999999999998765
Q ss_pred CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 938 SWP--VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 938 ~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.+| ..+.+|+|+++++|++||| +|+++|+++.+++.+
T Consensus 413 ~~p~~~~~~l~is~~e~~t~edid---~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 413 YFPLIVPEALMIEPTETESKETLD---AFIAAMKQIAEEAKE 451 (481)
T ss_pred ccccccCCeEEEcccCCCCHHHHH---HHHHHHHHHHHHHHh
Confidence 555 3678999999999999999 999999999887764
No 16
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-46 Score=465.84 Aligned_cols=403 Identities=20% Similarity=0.303 Sum_probs=321.0
Q ss_pred cCCCCCHHHHHHHHHHhCCC--CHHHhh-------hhcCCCcc-ccCCCCCC-CCCCCCCHHHHHHHHHHHHcCCCcc-c
Q 001990 101 RHNSATPEDQAKMSELVGLD--NLDSLI-------DATVPKSI-RIDSMKFS-KFDEGLTESQMIEHMQKLASMNKVY-K 168 (985)
Q Consensus 101 ~~~~~~~~~~~~ml~~~g~~--~~~~l~-------~~~ip~~~-~~~~~~lp-~~~~~~se~e~~~~~~~~~~~n~~~-~ 168 (985)
.+--+|++|++..++.++.. +.+.+- ...||+++ |++++.+| .|..-.||.|++|||++|++||... .
T Consensus 420 ~~e~~t~~did~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~l~~kn~~~~~ 499 (954)
T PRK05367 420 LDETTTREDLAALLAVFGGAALDVDALDADVADASASALPAALLRTSAYLTHPVFNRYHSETEMMRYLRRLEDKDLALDR 499 (954)
T ss_pred ecccCCHHHHHHHHHHHcccccchhhhhhhhcccccccCCHHHhcCCcccCCcccCCCCCHHHHHHHHHHHHhcCcCccc
Confidence 34446899999999999843 222221 12499999 88887776 2233469999999999999999873 3
Q ss_pred eecCCCCCCCCCcHHHHHHHHhCCccccccCCChh-hHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHH-HHHH
Q 001990 169 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA-EIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE-AMAM 246 (985)
Q Consensus 169 ~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~-e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~e-a~~~ 246 (985)
++++.|.+...+++.+.+.++++++|++ |||||| |++||+||+++|+|+++|+|||++ ++++++++++.+| +.++
T Consensus 500 ~~i~lGsct~~~~p~~~~~~~~~~~f~~-~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~ 576 (954)
T PRK05367 500 SMIPLGSCTMKLNAAAEMIPITWPEFAN-LHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLL 576 (954)
T ss_pred ceeeCCcCCCcCCHHHHHHHHhCccccc-cCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHHH
Confidence 4444444444455555569999999966 999999 899999999999999999999998 5999999998888 5566
Q ss_pred Hhhh---hcC--CCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCCCC
Q 001990 247 CNNI---QKG--KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTE 309 (985)
Q Consensus 247 a~~~---~~~--~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~---~~t~~V~v~~pn~~ 309 (985)
+.+. .++ ++++|++++..|+++...+. ..|+++++++. ++|++ ++ +++++|++|+||+.
T Consensus 577 a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~----~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~ 652 (954)
T PRK05367 577 AIRAYHESRGEGHRDVCLIPSSAHGTNPASAV----MAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTH 652 (954)
T ss_pred HHHHHhhccCCCCCCEEEEEchhhhhhHHHHH----HCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC
Confidence 6552 211 34679999999998887763 46899998865 34655 53 36899999999999
Q ss_pred eee-ccHHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCc
Q 001990 310 GEV-LDYGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (985)
Q Consensus 310 G~i-~dl~~I~~~a~~~galliV-~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~ 386 (985)
|.+ .|+++|+++||++|++++| ++|+.++..+.+|+++|||++++++ |+|++|+++||||+|++++++.+.++||++
T Consensus 653 G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~ 732 (954)
T PRK05367 653 GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGH 732 (954)
T ss_pred eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCC
Confidence 987 5899999999999999999 6787777777789999999999998 999999999999999999999999999999
Q ss_pred eeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCC
Q 001990 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (985)
Q Consensus 387 ~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~ 466 (985)
.+|.+.+.++. + .. .|+++| +++.++.+.+|+.++|++|++++.+++..+|+|++++|++.
T Consensus 733 ~v~~~~~~~~~-g-------------~v-~ta~~g--~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~-- 793 (954)
T PRK05367 733 PVQIAGGETGI-G-------------AV-SAAPFG--SASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH-- 793 (954)
T ss_pred ccCcCCCCCCc-C-------------cc-hhHHHH--HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 87743321110 1 11 256677 56777788889999999999999999999999999999873
Q ss_pred EEEc--C--CCCcceEEEecC------C--HHHHHHHHHHcCceeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 467 VEVQ--G--LPFFDTVKVKCA------D--AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 467 ~~~~--~--~~~~~~~~i~~~------~--~~~l~~~L~~~Gi~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+++. + .++++++.+++. + +.+++++|.+.||+..... .+.+++++||++|++|||+|++++..
T Consensus 794 ~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~ 871 (954)
T PRK05367 794 YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIA 871 (954)
T ss_pred cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHH
Confidence 5543 2 255677777652 2 7899999999999876532 68999999999999999999999974
No 17
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=1.7e-44 Score=443.39 Aligned_cols=402 Identities=20% Similarity=0.283 Sum_probs=332.0
Q ss_pred CCCCCHHHHHHHHHHhC-CCCHH-------HhhhhcCCCcc-ccCC-CCCCCCCCCCCHHHHHHHHHHHHcCCCcc-cee
Q 001990 102 HNSATPEDQAKMSELVG-LDNLD-------SLIDATVPKSI-RIDS-MKFSKFDEGLTESQMIEHMQKLASMNKVY-KSF 170 (985)
Q Consensus 102 ~~~~~~~~~~~ml~~~g-~~~~~-------~l~~~~ip~~~-~~~~-~~lp~~~~~~se~e~~~~~~~~~~~n~~~-~~~ 170 (985)
|--+|++|++..++.++ .++++ +-....||+.+ |+.+ |.+|.|..-.||.|++||+++|+++|... +++
T Consensus 448 ~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~ 527 (993)
T PLN02414 448 DETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEHELLRYLHRLQNKDLSLVHSM 527 (993)
T ss_pred eccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHHHHHHHHHHHhhcccccccCC
Confidence 33468999999999995 32222 11222499998 7765 47887777799999999999999999875 568
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhh-HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHH-HHHHHh
Q 001990 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE-AMAMCN 248 (985)
Q Consensus 171 lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e-~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~e-a~~~a~ 248 (985)
+..|.+-.-+++.+.+..++.|+ ++..+||||+ ..||.++.++++++++|+++|++. +++++++|+..| +.+++.
T Consensus 528 ~plgsctmk~n~~~~~~~~~~~~-~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~--v~f~pnaga~ge~a~~~vi 604 (993)
T PLN02414 528 IPLGSCTMKLNATTEMMPVTWPE-FANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDS--FSLQPNAGAAGEYAGLMVI 604 (993)
T ss_pred ccCcccccccCchhhhhhhcCcc-hhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCe--EEEcCCCcHHHHHHHHHHH
Confidence 88887777799999888899998 4788999998 999999999999999999999955 999999886655 444443
Q ss_pred h-hhcCCCC----EEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCCCCe-
Q 001990 249 N-IQKGKKK----TFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTEG- 310 (985)
Q Consensus 249 ~-~~~~~g~----~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~---~~t~~V~v~~pn~~G- 310 (985)
+ +.+.+|| +||++..+|.++..+|.. .|+++++++. ++|++ ++ ++|++|++|+||+.|
T Consensus 605 ~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~----~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg 680 (993)
T PLN02414 605 RAYHLSRGDHHRNVCIIPVSAHGTNPASAAM----CGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGV 680 (993)
T ss_pred HHHHhccCCCCCCEEEeCCCcCccCHHHHHH----CCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCcccc
Confidence 3 2222244 899999999999999864 5888888764 45666 66 489999999997655
Q ss_pred eeccHHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCcee
Q 001990 311 EVLDYGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIV 388 (985)
Q Consensus 311 ~i~dl~~I~~~a~~~galliV-~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~v 388 (985)
.+.||++|+++||++|++++| ++|+.+++.+..|+++|+||+++++ |+|++|+|+||||+|++++++++.++||++.+
T Consensus 681 ~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v 760 (993)
T PLN02414 681 YEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 760 (993)
T ss_pred ccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCcc
Confidence 556799999999999999999 7898899888889999999999998 88999999999999999999999999999988
Q ss_pred eeeecCCCCcceEEecccccccccccccCCCccc------hhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHh
Q 001990 389 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICT------AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLK 462 (985)
Q Consensus 389 G~s~d~~g~~~~~l~l~tre~~~rre~atsni~t------~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~ 462 (985)
|.+. +| .+|++ |+|||| ++++.++.|.+|+..+|.+|++++++++..+|+|++++|+
T Consensus 761 ~~~~------~~----------~~r~~-~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~ 823 (993)
T PLN02414 761 VPTG------GI----------PRPEK-TQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLE 823 (993)
T ss_pred ccCC------Cc----------ccccC-CCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 7321 12 14666 899999 7788888889999999999999999999999999999998
Q ss_pred cCCCEEEc--C--CCCcceEEEecC-------C-HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHH
Q 001990 463 KLGTVEVQ--G--LPFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVF 527 (985)
Q Consensus 463 ~~g~~~~~--~--~~~~~~~~i~~~-------~-~~~l~~~L~~~Gi~~~~~---~~~~lris~~~~~t~edid~ll~~l 527 (985)
+. +.+. + .+++++|++... . +.+++++|.++||..... .++++|+++||+++++|||+|++++
T Consensus 824 ~~--~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al 901 (993)
T PLN02414 824 GH--YPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDAL 901 (993)
T ss_pred hh--CCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHH
Confidence 73 4443 2 267889888765 2 689999999999986543 2689999999999999999999999
Q ss_pred hC
Q 001990 528 AG 529 (985)
Q Consensus 528 ~~ 529 (985)
..
T Consensus 902 ~~ 903 (993)
T PLN02414 902 IS 903 (993)
T ss_pred HH
Confidence 74
No 18
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-42 Score=370.70 Aligned_cols=389 Identities=20% Similarity=0.300 Sum_probs=303.0
Q ss_pred CCCCHHHhhhhcCCCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCCccc-eecCCCCCCCCCcHHHHHHHHhCCccc
Q 001990 118 GLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYK-SFIGMGYYNTHVPPVILRNIMENPAWY 195 (985)
Q Consensus 118 g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~~~~-~~lG~g~~~~~~p~~v~~~i~~~~~~~ 195 (985)
|++..++-.+..+|..+ ++.+ .+| ..||.|++||+++|+++|.... .+.-.|.+-.-+++.+.+..+..++|
T Consensus 19 ~~~l~~~~~~~~L~~~~~r~~~-~~P----e~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f- 92 (496)
T COG1003 19 GYSLPEQVVEEYLPHPVFRRYP-PLP----EHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEF- 92 (496)
T ss_pred ccccccccchhhcCcHHhhcCC-CCc----cccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccch-
Confidence 33334444444477788 4443 346 7999999999999999998762 23334433344899988778888885
Q ss_pred cccCCChhh-HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHH-HHHhh-hh--c--CCCCEEEEcCCCChhH
Q 001990 196 TQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM-AMCNN-IQ--K--GKKKTFIIASNCHPQT 268 (985)
Q Consensus 196 t~~~py~~e-~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~-~~a~~-~~--~--~~g~~Vlv~~~~h~s~ 268 (985)
...+||||+ ..||.++.++++|++++++||||. +||++++.+..|-+ +|+++ +. + +.|+.+||+++.|..+
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 566999998 899999999999999999999999 99999888888865 55544 32 2 2678899999999655
Q ss_pred HHHHHHhhcCCCeEEEEeC--------chhhhc-cCCCEeEEEEEcCCCCeeec-cHHHHHHHHHhCCcEEEE-Eecccc
Q 001990 269 IDICITRADGFDIKVVVSD--------LKDIDY-KSGDVCGVLVQYPGTEGEVL-DYGDFIKNAHANGVKVVM-ATDLLA 337 (985)
Q Consensus 269 ~~~~~~~a~~~gi~v~~~~--------~~~l~~-l~~~t~~V~v~~pn~~G~i~-dl~~I~~~a~~~galliV-~a~~~a 337 (985)
-+-. .--|++|+.|+ ++||++ ++++++++++||||+.|.++ +|.+|++++|++|++|++ |||..+
T Consensus 171 PASA----am~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 171 PASA----AMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred hhhH----hhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhh
Confidence 4442 23478888774 467877 88999999999999999997 899999999999999999 799999
Q ss_pred ccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccccccccccc
Q 001990 338 LTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (985)
Q Consensus 338 lg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~a 416 (985)
+-.+.+||++|+||+..+. |+|++|+|.||||.|.+.|++.+.++||++. .. .+ +.. |.+....+ ..+.|-
T Consensus 247 ~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~-~~--~~~-y~~~~~~~-~s~g~~-- 318 (496)
T COG1003 247 IVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VY-HD--VGE-YRLDYDGK-KSIGVS-- 318 (496)
T ss_pred hhccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-cc-CC--Ccc-ccccCCCC-ccceee--
Confidence 8888899999999999999 9999999999999999999999999999864 21 01 111 33322111 222222
Q ss_pred CCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC--CCcceEEEecC------C--H
Q 001990 417 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--PFFDTVKVKCA------D--A 485 (985)
Q Consensus 417 tsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~--~~~~~~~i~~~------~--~ 485 (985)
.+++.+.+. -..+-+|+..+|.+||++..+...-+|+|++++|+.. +++. .. ...++++++.. + +
T Consensus 319 ~a~~Gs~~i--l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~ 394 (496)
T COG1003 319 AAPYGSASI--LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRA 394 (496)
T ss_pred ccccCcchH--HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcH
Confidence 133333222 3456679999999999999999999999999999973 6664 22 35678888765 3 8
Q ss_pred HHHHHHHHHcCceeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 486 HAIASAAYKIEMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 486 ~~l~~~L~~~Gi~~~~-----~~~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
.+|+++|.+.|++.+. +..++++|.+||..+++++|+|++++...
T Consensus 395 ~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I 444 (496)
T COG1003 395 LDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAI 444 (496)
T ss_pred HHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999997643 35799999999999999999999999853
No 19
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=2.1e-37 Score=364.50 Aligned_cols=416 Identities=24% Similarity=0.330 Sum_probs=313.4
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCccccccCCHHHHHHHHHHHhcCccCcCccccc
Q 001990 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (985)
Q Consensus 514 ~~t~edid~ll~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~ 593 (985)
-|+++|++.|++.|+.. |+|+|++ +||+.+|++.+. ++| ++.||.++++++.+++++|.......++
T Consensus 6 ~~~~~~~~~~~~~~~~~-----~~~~~~~----~~p~~~~~~~~~-~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 72 (447)
T PRK00451 6 PHTEEDIREMLDAIGVK-----SIDELFA----DIPEELRLKRPL-DLP---PGLSEMELLRHLRELAAKNKTAEEYPSF 72 (447)
T ss_pred CCCHHHHHHHHHHhCCC-----CHHHHHH----hCCHHHHhCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCcCcCccc
Confidence 36899999999999976 8999974 799999998875 677 5679999999999999888655545678
Q ss_pred ccceecccCccccccc-cccccccc-cCCCCcchhhhcHHHHHHHHHHHHHHHhCCCcccee-cChHHHHHHHHHHHHHH
Q 001990 594 LGSCTMKLNATTEMMP-VTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRA 670 (985)
Q Consensus 594 lGs~~~~~~~~~~~~~-~~~~~f~~-~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~~~~-~~sGa~g~~a~l~air~ 670 (985)
+|.+.++......... ....++.+ |+|+++ +.++|.++.+.++++++++++|++...+. .++|+.+.++++++++.
T Consensus 73 lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~ 151 (447)
T PRK00451 73 LGAGAYDHYIPAVVDHIISRSEFYTAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRI 151 (447)
T ss_pred CcccccCCcCcHHHHHHHhchhHHHhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh
Confidence 8875554443333322 23345544 899998 88999999999999999999999876543 44444444455444431
Q ss_pred HHHhcCCCCCCEEEEcCCCCCCcHHHHH----hcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc
Q 001990 671 YHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (985)
Q Consensus 671 ~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~----~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~ 746 (985)
.++++||+++.+|+++...++ ..|++++.+|++++ .+|+++|+++++ ++|++|++++||++|.++
T Consensus 152 -------~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~---~~t~~v~l~~pn~tG~v~ 220 (447)
T PRK00451 152 -------TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD---DDTAAVVVQYPNFFGVIE 220 (447)
T ss_pred -------cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC---CCeEEEEEECCCCCCeeC
Confidence 256889999998988776654 37999999999877 999999999997 789999999999999998
Q ss_pred cCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCcccc
Q 001990 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (985)
Q Consensus 747 ~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~ 826 (985)
|+++|+++||++|++++|+. ...+.+.+..++++++|++++++|| |++|+.+||||+|++++++++.+.+++.++|+
T Consensus 221 -~l~~I~~~a~~~~~~~iv~~-d~~~~g~~~~~~~~~~D~~~~s~~k-~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~ 297 (447)
T PRK00451 221 -DLEEIAEIAHAGGALFIVGV-DPVSLGLLKPPGEYGADIVVGEGQP-LGIPLSFGGPYLGFFATRKKLVRQMPGRLVGE 297 (447)
T ss_pred -CHHHHHHHHHHCCCEEEEEc-ChHHhccCCCcccCCCCEEEECCCc-CCCCCCCCCCCchHHHhhHHHHhhCCCCEeee
Confidence 89999999999999999831 1123444455788999999999886 88999999999999999999888888776665
Q ss_pred CCCC-CC-------------CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001990 827 TGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (985)
Q Consensus 827 ~~~~-~~-------------~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i 892 (985)
+.+. .+ .+++.++.+++++ ......++++++..++++|+.+..++..++++++.++|++...+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~ 374 (447)
T PRK00451 298 TVDADGKRGFVLTLQAREQHIRREKATSNICTN---QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGV 374 (447)
T ss_pred ecccCCCeeeEeecccccccccccccccccccc---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCE
Confidence 4211 00 1234455565542 12222344556777889999999999999999999999873222
Q ss_pred eEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC---CCC-CCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM---SWP-VPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 893 ~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~---~~p-v~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
.... +..++.++++++ .+..++.++|.++||.+... .+| ..+.+|+|+++++|++||| +|+++|
T Consensus 375 ~~~~--~~~~~~~~v~~~-------~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~---~l~~~L 442 (447)
T PRK00451 375 ELFD--GPFFNEFVVRLP-------KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDID---ALVAAL 442 (447)
T ss_pred EecC--CCeEEEEEEecC-------CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHH---HHHHHH
Confidence 2211 234444556652 35689999999999885321 122 3478999999999999999 999999
Q ss_pred HHHH
Q 001990 969 LSLT 972 (985)
Q Consensus 969 ~~i~ 972 (985)
++++
T Consensus 443 ~~~~ 446 (447)
T PRK00451 443 GEVL 446 (447)
T ss_pred HHHh
Confidence 8764
No 20
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=1.7e-35 Score=343.27 Aligned_cols=375 Identities=44% Similarity=0.650 Sum_probs=300.9
Q ss_pred HHHHHHHHHHHHcCCCccc---eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCC
Q 001990 150 ESQMIEHMQKLASMNKVYK---SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (985)
Q Consensus 150 e~e~~~~~~~~~~~n~~~~---~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~ 226 (985)
|.||++|+++++++|.... ..+|.|..+|..|..+.+...+. ...+.|+||.+..++|..+...++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 5699999999998887542 47788888888999986433333 3467899999999999999999999999999999
Q ss_pred CCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCC
Q 001990 227 PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (985)
Q Consensus 227 ~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~ 297 (985)
+..++.++.+++.++++++++.....++||+|++++..|+++...+....+..|++++.++. +++++ ++++
T Consensus 80 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 159 (398)
T cd00613 80 DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE 159 (398)
T ss_pred CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC
Confidence 87667788877766676655443332248999999999999999997765666788887754 34555 7889
Q ss_pred EeEEEEEcCCCCeeeccH-HHHHHHHHhCCcEEEEEecccccc-CCCCCCcccceEEEecC-ccccccCCCCCCceEEEE
Q 001990 298 VCGVLVQYPGTEGEVLDY-GDFIKNAHANGVKVVMATDLLALT-ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (985)
Q Consensus 298 t~~V~v~~pn~~G~i~dl-~~I~~~a~~~galliV~a~~~alg-~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~ 374 (985)
|++|++++|+++|.+.|+ ++|+++||++|++++||. .++.+ ....++++|+|++++++ |++ .|++.|||++||++
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~-~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~ 237 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDG-DNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFA 237 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEe-ccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEE
Confidence 999999999989999985 999999999999999953 22222 34456789999999999 767 99999999999999
Q ss_pred EchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHH
Q 001990 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (985)
Q Consensus 375 ~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a 454 (985)
+++++++.+++..+||..+..+.+.|.+.+..+..+.|||++|+|+++..++.+..+...+..++.+|++++.+++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNA 317 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999888875433344557777766777889999999999988887777777778889999999999999999
Q ss_pred HHHHHHHhcCCCEEEcCCCCcceEEEecC---C--HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHH
Q 001990 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 526 (985)
Q Consensus 455 ~~l~~~L~~~g~~~~~~~~~~~~~~i~~~---~--~~~l~~~L~~~Gi~~~~~---~~~~lris~~~~~t~edid~ll~~ 526 (985)
++++++|+++++..+...+++..+.+..+ + +.++.++|.++||.+... ..+.+|+|++.+||++|||+++++
T Consensus 318 ~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 318 NYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred HHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 99999999986333223344445566654 3 678999999999987553 358899999999999999999987
Q ss_pred H
Q 001990 527 F 527 (985)
Q Consensus 527 l 527 (985)
|
T Consensus 398 L 398 (398)
T cd00613 398 L 398 (398)
T ss_pred C
Confidence 4
No 21
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=336.53 Aligned_cols=398 Identities=21% Similarity=0.298 Sum_probs=322.5
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCccccccCCHHHHHHHHHHHhcCccCcCcccccc
Q 001990 515 TTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (985)
Q Consensus 515 ~t~edid~ll~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~l 594 (985)
-++.|..++++.++-. ++++|.. ..+|.++|.++++ .+| ++++|.|+++++..++++|.. .++.|..
T Consensus 59 p~~~dq~~ml~tlG~~-----dl~~l~~---~~VP~~Ir~~~~l-~~~---~~~~E~eml~~l~~ia~kNk~-~ksfIGm 125 (1001)
T KOG2040|consen 59 PSPTDQQQMLDTLGYK-----DLDELIE---KTVPKSIRLKRPL-KMD---KPLCESEMLQHLEDIASKNKI-WKSFIGM 125 (1001)
T ss_pred CCchHHHHHHHhcChh-----hHHHHHH---hhcchhhcccchh-cCC---CCcCHHHHHHHHHHHHhhhhH-HHHhhcc
Confidence 4677888999999876 6777764 5799999999985 666 889999999999999999974 4567888
Q ss_pred cceecccCccccccccccccccc-cCCCCcchhhhcHHHHHHHHHHHHHHHhCCCcc--ceecChHHHHHHHHHHHHHHH
Q 001990 595 GSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAY 671 (985)
Q Consensus 595 Gs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~--~~~~~sGa~g~~a~l~air~~ 671 (985)
|++.+.+++.+......+++|++ |+|||| |++||.++.+-+++.++++++|.+.+ ++...+++.|+ |+.++.+.
T Consensus 126 GYyn~~vP~~I~RNilenp~W~TqYTPYQ~-EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE-Am~l~~~~- 202 (1001)
T KOG2040|consen 126 GYYNTHVPAVILRNILENPGWYTQYTPYQA-EISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE-AMALCNRI- 202 (1001)
T ss_pred ccccccCcHHHHHHhhhCCcceeccCCCch-hhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH-HHHHHHhh-
Confidence 99888888888777788899988 999998 99999999999999999999999874 57777777666 76665553
Q ss_pred HHhcCCCCCCEEEEcCCCCCCcHHHHH----hcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCcccccc
Q 001990 672 HKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEE 747 (985)
Q Consensus 672 ~~~~g~~~~~~Vlv~~~~Hg~~~~~~~----~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~ 747 (985)
.++.++++....|.-.-..++ ..|++++.. |+++... ..+++++|++++|++.|.+.
T Consensus 203 ------~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~~~~~----s~~~v~gvlvQYP~t~G~i~- 263 (1001)
T KOG2040|consen 203 ------NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIKEADY----SSKDVSGVLVQYPDTEGSVL- 263 (1001)
T ss_pred ------cccceEEecCCCCcchhhhhhccccccceeEEec--------CHHHhhc----cccceeEEEEEcCCCCCccc-
Confidence 456678998887765444432 345554333 3333222 12679999999999999998
Q ss_pred CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccC
Q 001990 748 GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (985)
Q Consensus 748 di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~ 827 (985)
|..++++.+|+.|.++++ ++...++..+..||++|+||+++|. +-|++|+|+|||..||+++++++.+.+||+++|.+
T Consensus 264 d~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvt 341 (1001)
T KOG2040|consen 264 DFDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVT 341 (1001)
T ss_pred CHHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHHHhhCCCceEeee
Confidence 899999999999999877 6777788888889999999999987 77999999999999999999999999999999977
Q ss_pred CCC-------------CCC-CCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCe
Q 001990 828 GGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (985)
Q Consensus 828 ~~~-------------~~~-~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i 892 (985)
.|. ++| +|.++|+|||++ +++.+..+..|.-+.|++|+.++++++...+-+|...|+. +.++
T Consensus 342 kD~~gk~a~RLALQTREQHIrRDKATSNICTA---QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel 418 (1001)
T KOG2040|consen 342 KDALGKEAYRLALQTREQHIRRDKATSNICTA---QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHEL 418 (1001)
T ss_pred ecccccHHHHHHHHHHHHHhhhhccchhhhHH---HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhh
Confidence 553 122 478999999985 7787777888888999999999999999999999999986 6555
Q ss_pred eEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 893 ~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
.. .+++..+-+.+ +-+.+++.++..+++|...... .+.|-+++.+..+++|+| .++..+.
T Consensus 419 ~~----k~fFDTLkI~~-------~~s~~~~l~rA~~~~iNlr~~e---d~tigvslDETv~~~Dvd---dLl~vf~ 478 (1001)
T KOG2040|consen 419 QH----KPFFDTLKIRC-------GCSAEEVLDRAAKRQINLRLVE---DGTIGVSLDETVTEKDVD---DLLWVFN 478 (1001)
T ss_pred cc----ccccceEEEEe-------cCcHHHHHHHHHhhcCceEEee---cCceEEeecccccHHHHH---HHHHHHc
Confidence 42 24555555555 3467888888888887754332 478999999999999999 8888876
No 22
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=3.2e-33 Score=324.33 Aligned_cols=374 Identities=43% Similarity=0.644 Sum_probs=277.3
Q ss_pred HHHHHHHHHHHhcCccCcCcccccccceecccCcccccccccc--ccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCC
Q 001990 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTW--PSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (985)
Q Consensus 570 e~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~--~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~ 647 (985)
|+|+++++.++++++...+.+++.+|.|.+.++.......... ..+..|+||.| ..+.|..++.+++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQP-EISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCCh-hhhhhHHHHHHHHHHHHHHHHCC
Confidence 5799999999999998888888899988887776654433211 12233667765 66789999999999999999998
Q ss_pred Cc--cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcC----cEEEEEeCCCCCCCCHHHHH
Q 001990 648 DS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----MKIVSVGTDAKGNINIEELR 721 (985)
Q Consensus 648 ~~--~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G----~~v~~v~~~~~g~iDle~L~ 721 (985)
+. ..+..++|++++ .++++++. .+ .++++|++++.+|+.+...+...| ++++.+++++++.+|+++++
T Consensus 80 ~~~~v~~~~~g~~~~~-~~~~~~~~---~~--~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (398)
T cd00613 80 DVANASLQDEATAAAE-AAGLAAIR---AY--HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALK 153 (398)
T ss_pred CccceeccCchHHHHH-HHHHHHHh---cc--cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHH
Confidence 74 334444444444 33333331 11 147899999999999988777666 99999999777889999999
Q ss_pred HHHHhcCCCeEEEEEEcCCCccccccC-HHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCC
Q 001990 722 KAAEANRDNLSTLMVTYPSTHGVYEEG-IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHG 800 (985)
Q Consensus 722 ~~i~~~~~~t~~Vvi~~pn~~G~i~~d-i~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g 800 (985)
++++ ++|++|++++|+++|.+. | +++|+++|+++|+++++|++|..+. +..+++.+++|++++++|||+ +|+|
T Consensus 154 ~~i~---~~t~~viv~~~~~~G~~~-~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~-~p~g 227 (398)
T cd00613 154 EEVS---EEVAALMVQYPNTLGVFE-DLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTG-VPHG 227 (398)
T ss_pred HhcC---CCeEEEEEECCCCCceec-chHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccC-CCCC
Confidence 9997 789999999998889997 6 5999999999999999999886444 445677889999999999999 9999
Q ss_pred CCCCcceeeeecccccCcCCCCccccCCCC----------C----CCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGGI----------P----APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 801 ~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~----------~----~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+|||++|++++++++.+.+++...++..+. . ..+++.+++++.+ +....+..+++++..++.+
T Consensus 228 ~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~---~~~~~~~~a~~~l~~~~~~ 304 (398)
T cd00613 228 GGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT---GQALLALMAAMYIVYLGPE 304 (398)
T ss_pred CCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee---cHHHHHHHHHHHHHHhCHH
Confidence 999999999999888777665443332110 0 0112345555443 2445566677888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEE
Q 001990 867 GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~l 945 (985)
|+.+..++..+++++++++|++ +..... .+...+.+.++++. ..+.+..++++.|.++||++.....+..+.|
T Consensus 305 g~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~v~~~~~~---~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~l 378 (398)
T cd00613 305 GLKEIAERAHLNANYLAKRLKEVGGVLPF---NGPFFHEFVLRLPP---LYGIRAEDLAKALIDGGFHAPTMYLPVDGTL 378 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCeeEEEEEEcCC---cchHHHHHHHHhhhhcCccccccccCCCCeE
Confidence 9988888999999999999987 322211 12334444555531 0023567899999999998764322235789
Q ss_pred EEeccCCCCHHhhchHHHHHHHH
Q 001990 946 MIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 946 ris~t~~~t~eeId~~~~~i~aL 968 (985)
|++|+.++|+|||| +++++|
T Consensus 379 Ris~~~~~t~edid---~~~~~L 398 (398)
T cd00613 379 MIEPTETETKEELD---ALLEAL 398 (398)
T ss_pred EEEcCCCCCHHHHH---HHHHhC
Confidence 99999999999999 998764
No 23
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-32 Score=314.09 Aligned_cols=359 Identities=19% Similarity=0.165 Sum_probs=275.6
Q ss_pred HHHHHHHHHHHcCC---CccceecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhHhhHHHHHHHHHHHHHHHhhCC
Q 001990 151 SQMIEHMQKLASMN---KVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (985)
Q Consensus 151 ~e~~~~~~~~~~~n---~~~~~~lG~g~~~~~~p~~v~~~i~~~~-~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~ 226 (985)
..+++.+..+.+.- ..|.+.-+.+ ..|..+.+.+..-. .++...+......++...+.+.++|+.+|+++|+
T Consensus 6 ~~~r~~fp~l~~~~~~~~vylD~aa~~----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a 81 (405)
T COG0520 6 AAVRADFPALKREVGKPLVYLDNAATS----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNA 81 (405)
T ss_pred HHHHhhCHHHhhccCCCeEEecCcccc----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 34777777776652 2333222222 37888766655311 0122223334457777788999999999999999
Q ss_pred CC-cceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC
Q 001990 227 PM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 296 (985)
Q Consensus 227 ~~-~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~ 296 (985)
++ .++.++.++|.++..+..++....++||+||+++.+|+++..+|+.+++..|++++++++ ++++. +++
T Consensus 82 ~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~ 161 (405)
T COG0520 82 DSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP 161 (405)
T ss_pred CCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC
Confidence 95 889999999988777665543112378999999999999999999999888999999875 34555 789
Q ss_pred CEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEE-eccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEE
Q 001990 297 DVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAF 372 (985)
Q Consensus 297 ~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~-a~~~alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~ 372 (985)
+|++|.+++ +|.+|++.|+++|+++||++|++++|| +| +.|.++ +..++|+|++++|+ |+|++|. |+|+
T Consensus 162 ~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq--~~~h~~idv~~l~~Df~afsgHKwl~gP~-----GiGv 234 (405)
T COG0520 162 KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQ--AAGHLPIDVQELGCDFLAFSGHKWLLGPT-----GIGV 234 (405)
T ss_pred CceEEEEECccccccccchHHHHHHHHHHcCCEEEEECcc--ccCccCCCchhcCCCEEEEcccccccCCC-----ceEE
Confidence 999999987 689999999999999999999999994 44 455443 56899999999999 6576553 6899
Q ss_pred EEEchhhHhcCCCceeeee-ecCCCC-cceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHH
Q 001990 373 LATSQEYKRMMPGRIVGVS-IDSSGK-PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRV 450 (985)
Q Consensus 373 l~~~~~~~~~lp~~~vG~s-~d~~g~-~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~ 450 (985)
||+++++++.|+|...|+. .+.... ..+. ..+...|.|.||+|+ .+.+++.+++ .++...|++++.++.
T Consensus 235 Ly~r~~~l~~l~P~~~gg~~~~~~~~~~~~~----~~~~p~rfe~gTpn~---~~~i~l~aAl--~~~~~ig~~~i~~~e 305 (405)
T COG0520 235 LYVRKELLEELEPFLGGGGMIEYVSRDEGVT----LAELPLRFEAGTPNI---AGAIGLAAAL--DYLLEIGMEAIEAHE 305 (405)
T ss_pred EEEchHHHhhcCCcccCCCceeeeccccccc----ccCcchhhccCCchH---HHHHhHHHHH--HHHHHHhHHHHHHHH
Confidence 9999999999988888852 221111 1111 134567889999999 4666777777 677777899999999
Q ss_pred HHHHHHHHHHHhcCCCEEEcCCC---CcceEEEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEecc
Q 001990 451 HGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDE 513 (985)
Q Consensus 451 ~~~a~~l~~~L~~~g~~~~~~~~---~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~------------~~~~lris~~~ 513 (985)
+++++|+.+.|+++.++++++.+ ....++|++++ +.+++..|.++||.++.. .++.+|+|++.
T Consensus 306 ~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~ 385 (405)
T COG0520 306 RELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHL 385 (405)
T ss_pred HHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEee
Confidence 99999999999999669998643 45678888887 899999999999987642 13459999999
Q ss_pred CCCHHHHHHHHHHHhC
Q 001990 514 TTTLEDVDKLFIVFAG 529 (985)
Q Consensus 514 ~~t~edid~ll~~l~~ 529 (985)
|||++|||+|+++|+.
T Consensus 386 YNt~edid~l~~aL~~ 401 (405)
T COG0520 386 YNTEEDVDRLLEALKK 401 (405)
T ss_pred cCCHHHHHHHHHHHHH
Confidence 9999999999999974
No 24
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.98 E-value=8.3e-31 Score=288.19 Aligned_cols=349 Identities=16% Similarity=0.186 Sum_probs=249.5
Q ss_pred cccccc-eecccCcc--ccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHH
Q 001990 591 MIPLGS-CTMKLNAT--TEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMV 667 (985)
Q Consensus 591 ~~~lGs-~~~~~~~~--~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~a 667 (985)
|++|.+ .|+++.+. ..|++.....|.|-+..+ ..-.-.++++++.++++|+++|+++..++++||++ ++.+++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H--~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~T--EsnNla 77 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLH--SFGREARKAVEEAREQIAKLLGADPEEIIFTSGAT--ESNNLA 77 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchh--HhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCc--HHHHHH
Confidence 566663 44444432 444444444455511111 11234678899999999999999987666666643 366677
Q ss_pred HHH--HHHhcCCCCCCEEEEcCCCCCCcHHHHH---hcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-C
Q 001990 668 IRA--YHKARGDHHRNVCIIPVSAHGTNPATAA---MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-T 741 (985)
Q Consensus 668 ir~--~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~---~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~ 741 (985)
++. +.... ..++.+||++...|.+.-..++ ..|++|.++|++.+|.+|+++|+++|+ ++|.+|.+.+.| .
T Consensus 78 I~g~~~a~~~-~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~---~~T~LVSim~aNnE 153 (386)
T COG1104 78 IKGAALAYRN-AQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR---PDTILVSIMHANNE 153 (386)
T ss_pred HHhhHHhhhc-ccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC---CCceEEEEEecccC
Confidence 765 22211 1246689999998876655544 469999999999999999999999998 899999999885 7
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCC-cceeeeecccccCcCC
Q 001990 742 HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLP 820 (985)
Q Consensus 742 ~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~~lp 820 (985)
+|+++ ||++|+++|+++|++||+|++|+.|...+ ++..+++|++++|+||. +|| |+|++++++... +.
T Consensus 154 ~G~IQ-pI~ei~~i~k~~~i~fHvDAvQa~Gkipi-~~~~~~vD~ls~SaHK~-------~GpkGiGaLyv~~~~~--~~ 222 (386)
T COG1104 154 TGTIQ-PIAEIGEICKERGILFHVDAVQAVGKIPI-DLEELGVDLLSFSAHKF-------GGPKGIGALYVRPGVR--LE 222 (386)
T ss_pred eeecc-cHHHHHHHHHHcCCeEEEehhhhcCceec-cccccCcceEEeehhhc-------cCCCceEEEEECCCCc--cC
Confidence 99999 89999999999999999999998777665 45677899999999995 466 999999976432 11
Q ss_pred CCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCC-
Q 001990 821 SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVN- 898 (985)
Q Consensus 821 g~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~- 898 (985)
+.+.|+ ++ .++++.||.|+++ ..+...++- +..+.+.....+.....++|.+.|.+ ...+.+.+..
T Consensus 223 p~i~GG-gQ--E~g~RsGTenv~~----Ivg~~~A~~-----~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~ 290 (386)
T COG1104 223 PLIHGG-GQ--ERGLRSGTENVPG----IVGFGKAAE-----IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDE 290 (386)
T ss_pred ceeccC-cC--CCCCCCCCccHHH----HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcc
Confidence 222232 12 1334567877763 333222221 12234555566777888889998887 3555555542
Q ss_pred CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC---CCC----C-------------CCCEEEEeccCCCCHHhh
Q 001990 899 GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MSW----P-------------VPGTLMIEPTESESKVCH 958 (985)
Q Consensus 899 ~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~---~~~----p-------------v~~~lris~t~~~t~eeI 958 (985)
....|.+.+.++ +++++.+...|..+||.+++ |+. | ..++||||++..+|++|+
T Consensus 291 ~rlP~~~~~~f~------gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei 364 (386)
T COG1104 291 PRLPNILNFSFP------GVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEI 364 (386)
T ss_pred cCCCCeEEEEeC------CCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHH
Confidence 334566777776 78999999999999999864 321 2 137899999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHcc
Q 001990 959 NREDLFFQILLSLTKFTTFAG 979 (985)
Q Consensus 959 d~~~~~i~aL~~i~~~~~~~~ 979 (985)
| +++++|+++++++++..
T Consensus 365 ~---~~~~~l~~~i~~lr~~~ 382 (386)
T COG1104 365 D---AAAEALKEIIKRLRELS 382 (386)
T ss_pred H---HHHHHHHHHHHHHhhhc
Confidence 9 99999999999987654
No 25
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.5e-29 Score=286.39 Aligned_cols=316 Identities=18% Similarity=0.208 Sum_probs=237.4
Q ss_pred hhhcHHHHHHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhc
Q 001990 626 QAQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMC 700 (985)
Q Consensus 626 ~~~G~~~~~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~ 700 (985)
..+-..+.+++.++.+++++|.+. ..+.++.+++ ++..+.++.+... ..++|+||+++..|.++... ++..
T Consensus 60 ~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT--~aln~va~~l~~~--~~~gdeIv~s~~EH~sn~~pw~~~~~~~ 135 (405)
T COG0520 60 LAEEATDLYEAAREAVARFLNADSSDEIVFTRGTT--EALNLVARGLGRS--LKPGDEIVVSDLEHHSNIVPWQELAKRT 135 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChh--HHHHHHHHHhhhh--hcCCCEEEEccCcchhhHHHHHHHHHhc
Confidence 345566789999999999999985 5555544443 1334444444211 24679999999999887544 3467
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC
Q 001990 701 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (985)
Q Consensus 701 G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~ 779 (985)
|++++++|++++|.+|++++++.++ ++|++|.+++. |.+|++. |+++|+++||++|++++||++|+.++..+ +.
T Consensus 136 Ga~v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~-pv~~I~~la~~~ga~v~VDaaq~~~h~~i-dv 210 (405)
T COG0520 136 GAKVRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVN-PVKEIAELAHEHGALVLVDAAQAAGHLPI-DV 210 (405)
T ss_pred CcEEEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccc-hHHHHHHHHHHcCCEEEEECccccCccCC-Cc
Confidence 9999999999899999999999887 89999999986 6799999 89999999999999999999998777665 56
Q ss_pred CcCCCcEEEeCCcccccccCCCCCC-cceeeeecccccCcCCCCccccCC----CC--------CCCCCCCCCCCccccc
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTG----GI--------PAPEKSQPLGTIAAAP 846 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~~lpg~~~g~~~----~~--------~~~~~~~~t~~i~s~~ 846 (985)
.++|+|++++|+|||| +|| |+|++++++++.+.+++...|+.. +. ..++.+.+|+++..
T Consensus 211 ~~l~~Df~afsgHKwl------~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~-- 282 (405)
T COG0520 211 QELGCDFLAFSGHKWL------LGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAG-- 282 (405)
T ss_pred hhcCCCEEEEcccccc------cCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHH--
Confidence 7899999999999998 466 899999999998887655544321 10 12235667777763
Q ss_pred chhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCC-ceeEEEEEEecCccccCCCCHHHHHH
Q 001990 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAK 925 (985)
Q Consensus 847 ~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~-~~~~~~vv~~~~~~~~~g~~~~~l~~ 925 (985)
...+.+|..++.. .|+.++.++..++++|+.++|++...+.+.++.. .....+.|.+. ++...+++.
T Consensus 283 ---~i~l~aAl~~~~~---ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~------~~~~~dv~~ 350 (405)
T COG0520 283 ---AIGLAAALDYLLE---IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK------GIHPHDVAT 350 (405)
T ss_pred ---HHhHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC------CCCHHHHHH
Confidence 2223444455554 4566777888999999999999855554444322 22334555554 678999999
Q ss_pred HHHHCCCccCC---CCCC------CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 926 RLMDYGFHGPT---MSWP------VPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 926 ~L~e~Gi~~~~---~~~p------v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.|.++||.+.. +..| +.+.+|+|+..+||+|||| +|+++|+++.+
T Consensus 351 ~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid---~l~~aL~~~~~ 404 (405)
T COG0520 351 LLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVD---RLLEALKKALA 404 (405)
T ss_pred HHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHH---HHHHHHHHHhh
Confidence 99999988643 2222 3466999999999999999 99999998754
No 26
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=6.6e-27 Score=272.05 Aligned_cols=359 Identities=16% Similarity=0.105 Sum_probs=257.6
Q ss_pred HHHHHHHHHHHcC----CCccceecCCCCCCCCCcHHHHHHHHhCCcccccc--CCC--hhhHhhHHHHHHHHHHHHHHH
Q 001990 151 SQMIEHMQKLASM----NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPY--QAEIAQGRLESLLNFQTMIAD 222 (985)
Q Consensus 151 ~e~~~~~~~~~~~----n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~--~py--~~e~sqg~l~~i~e~q~~ia~ 222 (985)
..++.++..+... ...|.+.-+.+. .|..+.+.+.. |+..+ .|. ....++-..+.+.++++.+|+
T Consensus 6 ~~~r~~fp~~~~~~~~~~~iYld~a~~~~----~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~ 78 (406)
T PRK09295 6 EKVRADFPVLSREVNGLPLAYLDSAASAQ----KPSQVIDAEAE---FYRHGYAAVHRGIHTLSAQATEKMENVRKQAAL 78 (406)
T ss_pred HHHHhhCccccCcCCCCceEEEeCccccc----CCHHHHHHHHH---HHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 4556666655321 135666666664 55555434332 22211 221 123445567788899999999
Q ss_pred hhCC-CCcceeeccchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhh
Q 001990 223 LTGL-PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDID 292 (985)
Q Consensus 223 L~g~-~~~~~sl~~~~ta~~ea~~~a~~~-~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~ 292 (985)
++|. ++.++.+++|+|.++..++.++.. ..++||+||+++.+|++....|..+++..|++++.++. ++++
T Consensus 79 ~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~ 158 (406)
T PRK09295 79 FINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLP 158 (406)
T ss_pred HcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHH
Confidence 9998 567888999999887766655321 11378999999999999998888877788999888753 4565
Q ss_pred c-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCc
Q 001990 293 Y-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPH 369 (985)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k~lg~P~~~GGP~ 369 (985)
+ ++++|++|++++| |.+|.+.|+++|+++||++|++++||+ ..+.|... +..++|+|++++|++++.+| +|
T Consensus 159 ~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp-----~G 232 (406)
T PRK09295 159 ALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLYGP-----TG 232 (406)
T ss_pred HhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEc-ccccCccccCchhcCCCEEEeehhhccCC-----CC
Confidence 5 7788999999997 789999999999999999999999953 34555433 33578999999999446444 45
Q ss_pred eEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHH
Q 001990 370 AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (985)
Q Consensus 370 ~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~ 449 (985)
+|++++++++++.+|+...|++.......... ...++...|+|.||+|+ .++.++.+++ .++...|++++.++
T Consensus 233 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~r~e~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~ 305 (406)
T PRK09295 233 IGILYVKEALLQEMPPWEGGGSMIATVSLTEG--TTWAKAPWRFEAGTPNT---GGIIGLGAAL--DYVSALGLNNIAEY 305 (406)
T ss_pred cEEEEEchHhHhhCCCcccCCceeeeeecCCc--cccCCchhhcCCCCccH---HHHHHHHHHH--HHHHHhCHHHHHHH
Confidence 89999999998889876655432100000000 11123445778999998 4666777776 55556689999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEcCC-CCcceEEEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEeccC
Q 001990 450 VHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDET 514 (985)
Q Consensus 450 ~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~------------~~~~lris~~~~ 514 (985)
+.+++++++++|+++++++++.+ .....++|..++ +.++.+.|.++||.++.- .++.+|+|++.+
T Consensus 306 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~y 385 (406)
T PRK09295 306 EQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY 385 (406)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCC
Confidence 99999999999999855988753 233467777765 788999999999987531 136799999999
Q ss_pred CCHHHHHHHHHHHhC
Q 001990 515 TTLEDVDKLFIVFAG 529 (985)
Q Consensus 515 ~t~edid~ll~~l~~ 529 (985)
||++|||+|+++|..
T Consensus 386 nt~~did~l~~~l~~ 400 (406)
T PRK09295 386 NTHEEVDRLVAGLQR 400 (406)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999973
No 27
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=3.5e-26 Score=262.78 Aligned_cols=356 Identities=18% Similarity=0.212 Sum_probs=243.2
Q ss_pred cCCHHHHHHHHHHHhcCccCcCcccccccc-eecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHh
Q 001990 567 YHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (985)
Q Consensus 567 ~~se~e~~~~l~~l~~~~~~~~~~~~~lGs-~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~ 645 (985)
+++|+|++++|+.+.++|+.+.+ +||+ +|+..+...+.... +...++..+ ...++..+.+.++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 72 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYER---ILSSMCTEPHPIARKAHEM----FLETNLGDP-GLFPGTAKLEEEAVEMLGELL 72 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHH---eeeeeecCchHHHHHHHHH----HHhcCCCCc-ccCccHHHHHHHHHHHHHHHh
Confidence 46899999999999999998764 4887 55544432222211 111011111 113467778889999999999
Q ss_pred CCCcc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCCCHHHHHHHH
Q 001990 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 724 (985)
Q Consensus 646 G~~~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~iDle~L~~~i 724 (985)
|++.. .++.++|++++..++.+++.. ...++++||+++..|.++...++..|++++.+|.++++.+|+++|+++|
T Consensus 73 g~~~~~~~~~~ggt~a~~~a~~~~~~~----~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 148 (371)
T PRK13520 73 HLPDAYGYITSGGTEANIQAVRAARNL----AKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLI 148 (371)
T ss_pred CCCCCCeEEecCcHHHHHHHHHHHHhh----ccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHH
Confidence 98764 355666776654444433321 1124678999998887777777788999999999888899999999999
Q ss_pred HhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC------CCCcCCCcEEEeCCcccccc
Q 001990 725 EANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPGYIGADVCHLNLHKTFCI 797 (985)
Q Consensus 725 ~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~------~~g~~g~Di~~~s~hKtl~~ 797 (985)
+ +++++|+++++ |.+|.+. |+++|+++|+++|+++|||++|..+..++. .....++|.+++++|||...
T Consensus 149 ~---~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a 224 (371)
T PRK13520 149 D---DNTIGIVGIAGTTELGQVD-PIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA 224 (371)
T ss_pred h---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc
Confidence 8 67777777766 5699998 899999999999999999999863322211 11235789999999997632
Q ss_pred cCCCCCCcceeeee-cccccCcCC---CCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHH
Q 001990 798 PHGGGGPGMGPIGV-KKHLAPFLP---SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (985)
Q Consensus 798 p~g~GGPg~G~l~~-~~~l~~~lp---g~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~ 873 (985)
|.++|++++ ++++.+.+. +...+. ... ...+++.+ ..+.++++.+..++.+|+.+..+
T Consensus 225 -----~~~~G~~~~~~~~~~~~l~~~~~~~~~~--------~~~---~~~gt~~~--~~~~~~~~al~~l~~~g~~~~~~ 286 (371)
T PRK13520 225 -----PIPAGGILFRDESYLDALAVDTPYLTSK--------KQA---TLTGTRSG--AGVAATYAVMKYLGREGYRKVVE 286 (371)
T ss_pred -----cCCceEEEEcCHHHHHhhcccCccccCC--------CCc---ceEeeccC--hHHHHHHHHHhhhcHhHHHHHHH
Confidence 224454554 454554432 111000 000 00011111 22445677788888889988888
Q ss_pred HHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCC
Q 001990 874 IAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 952 (985)
Q Consensus 874 ~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~ 952 (985)
+..++++++.++|++ ++++.. .+ ..+.+.+++. +..++.++|.++||.+..+.. ++.+|+|++..
T Consensus 287 ~~~~~~~~l~~~L~~~g~~~~~-~~---~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~ 352 (371)
T PRK13520 287 RCMENTRWLAEELKERGFEPVI-EP---VLNIVAFDDP--------NPDEVREKLRERGWRVSVTRC--PEALRIVCMPH 352 (371)
T ss_pred HHHHHHHHHHHHHHhCCCEEec-CC---CceEEEEecC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECC
Confidence 999999999999987 454322 21 2333445442 567899999999999865542 36899999999
Q ss_pred CCHHhhchHHHHHHHHHHHHH
Q 001990 953 ESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 953 ~t~eeId~~~~~i~aL~~i~~ 973 (985)
+|++||| +|+++|+++++
T Consensus 353 ~t~edi~---~~~~~l~~~~~ 370 (371)
T PRK13520 353 VTREHIE---NFLEDLKEVKK 370 (371)
T ss_pred CCHHHHH---HHHHHHHHHhh
Confidence 9999999 99999988654
No 28
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.1e-25 Score=261.57 Aligned_cols=360 Identities=16% Similarity=0.106 Sum_probs=256.1
Q ss_pred CCHHHHHHHHHHHHcCCCccceecCCCCCCCCCcHHHHHHHHhCCcccccc--CC--ChhhHhhHHHHHHHHHHHHHHHh
Q 001990 148 LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TP--YQAEIAQGRLESLLNFQTMIADL 223 (985)
Q Consensus 148 ~se~e~~~~~~~~~~~n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~--~p--y~~e~sqg~l~~i~e~q~~ia~L 223 (985)
++-.+++++|..+. .+..|.+.-+.|. .|..+.+.+.. |+..+ .| ......+...+.+.++++.+|++
T Consensus 4 ~~~~~~r~~fp~l~-~~~~yld~a~~~~----~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~ 75 (401)
T PRK10874 4 FNPAQFRAQFPALQ-DAGVYLDSAATAL----KPQAVIEATQQ---FYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQL 75 (401)
T ss_pred CCHHHHHHhCCCcC-CceEEEeCCcccC----CCHHHHHHHHH---HHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 34455677776542 3455666555554 44444433321 22211 11 22234566778889999999999
Q ss_pred hCC-CCcceeeccchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc
Q 001990 224 TGL-PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY 293 (985)
Q Consensus 224 ~g~-~~~~~sl~~~~ta~~ea~~~a~~~-~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~ 293 (985)
+|. ++.++.+++|+|.++..++.++.. ..++||+||+++.+|++.+..|+.+++..|++++.++. +++++
T Consensus 76 ~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~ 155 (401)
T PRK10874 76 LNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPE 155 (401)
T ss_pred cCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHH
Confidence 999 677898899999888877666521 11378999999999999988888777788999988754 34555
Q ss_pred -cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCce
Q 001990 294 -KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHA 370 (985)
Q Consensus 294 -l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k~lg~P~~~GGP~~ 370 (985)
++++|++|++++| |.+|.+.|+++|+++||++|++++||+ ..++|... +..++|+|++++|++++.+| ||+
T Consensus 156 ~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~G~ 229 (401)
T PRK10874 156 LITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDG-AQGAVHFPADVQALDIDFYAFSGHKLYGP-----TGI 229 (401)
T ss_pred hcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEC-CcccccccCCchhcCCCEEEEecccccCC-----Ccc
Confidence 7889999999987 689999999999999999999999953 33444332 33578999999998435334 467
Q ss_pred EEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHH
Q 001990 371 AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRV 450 (985)
Q Consensus 371 G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~ 450 (985)
|++++++++++.+++...|.+... . ..|. ....++...|.+.||.|+ ....++.+++ .++...|+.++.+++
T Consensus 230 G~l~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~e~Gt~~~---~~~~al~~al--~~l~~~g~~~~~~~~ 301 (401)
T PRK10874 230 GVLYGKSELLEAMSPWQGGGKMLT-E-VSFD-GFTPQSAPWRFEAGTPNV---AGVIGLSAAL--EWLADIDINQAESWS 301 (401)
T ss_pred EEEEEchHHHhcCCCeecCCcceE-e-eccC-ccCCCCChhhccCCCcCH---HHHHHHHHHH--HHHHHhCHHHHHHHH
Confidence 999999999998876543321100 0 0010 111223345677899998 5666677776 555567888899999
Q ss_pred HHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEeccCCC
Q 001990 451 HGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTT 516 (985)
Q Consensus 451 ~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~------------~~~~lris~~~~~t 516 (985)
.+++++++++|+++.|++++..+....+.|.+++ ..++.+.|.++||.++.. ..+.+|+|++.+||
T Consensus 302 ~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt 381 (401)
T PRK10874 302 RSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT 381 (401)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC
Confidence 9999999999998833887743333345666655 788999999999987542 14789999999999
Q ss_pred HHHHHHHHHHHhC
Q 001990 517 LEDVDKLFIVFAG 529 (985)
Q Consensus 517 ~edid~ll~~l~~ 529 (985)
++|+++++++|..
T Consensus 382 ~edid~ll~al~~ 394 (401)
T PRK10874 382 QSDVDALVNAVDR 394 (401)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999974
No 29
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=1.7e-26 Score=265.41 Aligned_cols=328 Identities=21% Similarity=0.202 Sum_probs=244.3
Q ss_pred CCcHHHHHHHHhCCcccccc--CC--ChhhHhhHHHHHHHHHHHHHHHhhCCCC-cceeeccchHHHHHHHHHHhhhhcC
Q 001990 179 HVPPVILRNIMENPAWYTQY--TP--YQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKG 253 (985)
Q Consensus 179 ~~p~~v~~~i~~~~~~~t~~--~p--y~~e~sqg~l~~i~e~q~~ia~L~g~~~-~~~sl~~~~ta~~ea~~~a~~~~~~ 253 (985)
.+|..+.+++.. ++..+ +| .....+....+.+.++++.+++++|++. .++.+..++|.+++.++.++....+
T Consensus 10 ~~p~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~ 86 (371)
T PF00266_consen 10 PMPKSVLEAISD---YLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLK 86 (371)
T ss_dssp B-BHHHHHHHHH---HHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGT
T ss_pred CCCHHHHHHHHH---HHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccc
Confidence 478888666553 11111 33 1223455667888999999999999998 8888899999998888777632123
Q ss_pred CCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHH
Q 001990 254 KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAH 323 (985)
Q Consensus 254 ~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~ 323 (985)
++++|+++..+|++...+|..+++..|+++++++. +++++ +++++++|++++. |.+|.+.|+++|+++||
T Consensus 87 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~ 166 (371)
T PF00266_consen 87 PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAH 166 (371)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhh
Confidence 88999999999999999999888788999988854 34555 7899999999875 78999999999999999
Q ss_pred hCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEE
Q 001990 324 ANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 402 (985)
Q Consensus 324 ~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l 402 (985)
++|++++||+ ..++|.+. +..++|+|++++++|+|++ +||+|++++++++.+++.+...|+..-. .. ..-
T Consensus 167 ~~~~~~~vD~-~~~~g~~~id~~~~~~D~~~~s~~Kl~g-----p~G~g~l~v~~~~~~~~~p~~~~~~~~~--~~-~~~ 237 (371)
T PF00266_consen 167 EYGALLVVDA-AQSAGCVPIDLDELGADFLVFSSHKLGG-----PPGLGFLYVRPEAIERLRPAKPGGGYLD--FP-SLQ 237 (371)
T ss_dssp HTTSEEEEE--TTTTTTSS--TTTTTESEEEEESTSTTS-----SSTEEEEEEEHHHHHHHHTSSSSSSTTT--HH-HHH
T ss_pred ccCCceeEec-hhccccccccccccccceeeecccccCC-----CCchhhheehhhhhhccccccccccccc--cc-cch
Confidence 9999999954 34666553 4578999999999944864 4679999999999988876666653100 00 000
Q ss_pred ecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCcceE
Q 001990 403 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTV 478 (985)
Q Consensus 403 ~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~~~~ 478 (985)
.........|++.||.|+ ..++++..++ .++...|++++.+|+.++++++++.|+++++++++.. .....+
T Consensus 238 ~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 312 (371)
T PF00266_consen 238 EYGLADDARRFEGGTPNV---PAIYALNEAL--KLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIV 312 (371)
T ss_dssp HHCHHSTTTGSSSSS--H---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEE
T ss_pred hcccccccccccccceee---ehhhhHHHHH--hhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceE
Confidence 000123344567789988 4556666665 5556779999999999999999999999976888642 123457
Q ss_pred EEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEeccCCCHHHHHHH
Q 001990 479 KVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLEDVDKL 523 (985)
Q Consensus 479 ~i~~~~--~~~l~~~L~~~Gi~~~~~------------~~~~lris~~~~~t~edid~l 523 (985)
+|..++ +.++.+.|.++||.++.- ..+.+|+|++.+||++|||+|
T Consensus 313 ~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 313 SFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 777766 899999999999987651 138999999999999999986
No 30
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=1e-25 Score=263.50 Aligned_cols=310 Identities=17% Similarity=0.126 Sum_probs=234.9
Q ss_pred hhHHHHHHHHHHHHHHHhhCCC-CcceeeccchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEE
Q 001990 206 AQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (985)
Q Consensus 206 sqg~l~~i~e~q~~ia~L~g~~-~~~~sl~~~~ta~~ea~~~a~~~-~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v 283 (985)
+.-..+.+.++++.+++++|++ +.++.++.|+|.++..++.++.+ ..++|++|+++..+|++....|+.+++..|+++
T Consensus 71 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 71 SAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 3444567788999999999996 46898999999887776654321 113789999999999999999988777889998
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001990 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (985)
Q Consensus 284 ~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~ 352 (985)
+.++. +++++ ++++|++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.|... +..++|+|++
T Consensus 151 ~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-a~~~g~~~~~~~~~~~d~~ 229 (424)
T PLN02855 151 KFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDA-CQSVPHMPVDVQTLGADFL 229 (424)
T ss_pred EEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCcCCCchhcCCCEE
Confidence 88754 34555 7789999999987 689999999999999999999999952 23444332 3467899999
Q ss_pred EecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001990 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 353 v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
+++++++.+| +|+|++++++++++.+++...|++.... . |......++...|++.||+|+ .+.+++.++
T Consensus 230 ~~s~~K~~gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~--~-~~~~~~~~~~~~r~e~GT~~~---~~~~~l~~a 298 (424)
T PLN02855 230 VASSHKMCGP-----TGIGFLWGKSDLLESMPPFLGGGEMISD--V-FLDHSTYAPPPSRFEAGTPAI---GEAIGLGAA 298 (424)
T ss_pred EeecccccCC-----CccEEEEEchhhhhcCCCEecCCCceee--e-ecCccccCCChhhccCCChHH---HHHHHHHHH
Confidence 9999556433 4689999999999999887766532100 0 100000123345678899998 456666666
Q ss_pred HHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC------CcceEEEecCC--HHHHHHHHHHc-Cceeeee-
Q 001990 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV- 502 (985)
Q Consensus 433 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~------~~~~~~i~~~~--~~~l~~~L~~~-Gi~~~~~- 502 (985)
+ .++...|++++.+++.+++++++++|+++.|++++.+. ....++|..++ +.++.+.|.++ ||.++.-
T Consensus 299 l--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~ 376 (424)
T PLN02855 299 I--DYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGH 376 (424)
T ss_pred H--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechh
Confidence 6 55556799999999999999999999988449988421 22457777765 78899999887 9987631
Q ss_pred -----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 -----------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 -----------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.++.+|+|++.+||++|+++|+++|+.
T Consensus 377 ~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 377 HCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 136799999999999999999999974
No 31
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.6e-25 Score=259.96 Aligned_cols=357 Identities=18% Similarity=0.120 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHcCCCccceecCCCCCCCCCcHHHHHHHHhCCcccccc--CC--ChhhHhhHHHHHHHHHHHHHHHhhCC
Q 001990 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TP--YQAEIAQGRLESLLNFQTMIADLTGL 226 (985)
Q Consensus 151 ~e~~~~~~~~~~~n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~--~p--y~~e~sqg~l~~i~e~q~~ia~L~g~ 226 (985)
.+++.+|..+. .+..|.+.-+.|. .|..+.+.+.. |+..+ .| ......+...+.+.++++.+|+++|+
T Consensus 4 ~~~r~~fp~l~-~~~iyld~a~~~~----~p~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~ 75 (398)
T TIGR03392 4 AQFRQQFPALQ-DGTVYLDSAATAL----KPQAVIDATQQ---FYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA 75 (398)
T ss_pred hHHHHhCCccC-CCeEEeeCccccC----CCHHHHHHHHH---HHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34555555442 2445666555554 55555444332 22111 12 11123444567788899999999999
Q ss_pred C-CcceeeccchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC
Q 001990 227 P-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 295 (985)
Q Consensus 227 ~-~~~~sl~~~~ta~~ea~~~a~~~-~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~ 295 (985)
+ +.++.+++|+|.++..++.++.. ..++||+||+++..|++....+...++..|++++.++. +++++ ++
T Consensus 76 ~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~ 155 (398)
T TIGR03392 76 PDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT 155 (398)
T ss_pred CCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc
Confidence 5 67888899999888877766521 01378999999999999888887777788999988754 34555 77
Q ss_pred CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCceEEE
Q 001990 296 GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFL 373 (985)
Q Consensus 296 ~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l 373 (985)
++|++|++.+| |.+|.+.|+++|+++||++|++++||+ ..+++... +..++++|++++|++++.+| +|+|++
T Consensus 156 ~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l 229 (398)
T TIGR03392 156 PRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG-AQGVVHGPPDVQALDIDFYAFSGHKLYGP-----TGIGVL 229 (398)
T ss_pred cCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCCCCChhhcCCCEEEEecccccCC-----CceEEE
Confidence 88999999987 689999999999999999999999953 33444332 33568999999999445434 458999
Q ss_pred EEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHH
Q 001990 374 ATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGL 453 (985)
Q Consensus 374 ~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~ 453 (985)
++++++++.+++...|........ + .....++...|+|.||+|+ .+..++.+++ .++...|++++.+++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~e~GT~~~---~~~~a~~~al--~~l~~~g~~~i~~~~~~l 301 (398)
T TIGR03392 230 YGKTELLEAMPPWQGGGKMLSHVS--F-DGFIPQAVPHRFEAGTPNI---AGVIGLSAAL--EWLTDIDIAAAEAWSVSL 301 (398)
T ss_pred EEcHHHHhhCCCeecCCceEeecc--c-cccccCCChhhccCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHH
Confidence 999999988876543322100000 0 0111233445678899998 5666777776 455566888999999999
Q ss_pred HHHHHHHHhcCCCEEEcCCCCcceEEEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEeccCCCHHH
Q 001990 454 AGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLED 519 (985)
Q Consensus 454 a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~------------~~~~lris~~~~~t~ed 519 (985)
++++++.|+++.|+++...+....++|..++ ++++.++|.++||.++.. .++.+|+|++.+||++|
T Consensus 302 ~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~e 381 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQD 381 (398)
T ss_pred HHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHH
Confidence 9999999998844887744333356666655 788999999999988532 14789999999999999
Q ss_pred HHHHHHHHhC
Q 001990 520 VDKLFIVFAG 529 (985)
Q Consensus 520 id~ll~~l~~ 529 (985)
+++++++|+.
T Consensus 382 i~~l~~~l~~ 391 (398)
T TIGR03392 382 VDALVDAVGA 391 (398)
T ss_pred HHHHHHHHHH
Confidence 9999999974
No 32
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.94 E-value=1.6e-24 Score=250.25 Aligned_cols=379 Identities=14% Similarity=0.116 Sum_probs=254.4
Q ss_pred CCccccccCCHHHHHHHHHHHhcCccCcCcccccccceecccCcc-ccccc-cccccccccCCCCcchhhhcHHHHHHHH
Q 001990 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT-TEMMP-VTWPSFANIHPFAPADQAQGYQEMFNNL 637 (985)
Q Consensus 560 ~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~-~~~~~-~~~~~f~~~~p~~p~e~~~G~~~~~~el 637 (985)
++| ++|++.+|+++.+...--.|.. ....++|++|++..+. .+.+. .....+. +| ..+....++++++
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~--a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~--np----~s~~~~~~le~~~ 85 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGN--PRLNLATFVTTWMEPEARKLMDETINKNMI--DK----DEYPQTAEIENRC 85 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCC--cceeeeeeeCCCCCHHHHHHHHHHHhcCCC--Cc----ccCccHHHHHHHH
Confidence 467 6889999999999875544332 2346777777654432 22221 1111122 22 2234555899999
Q ss_pred HHHHHHHhCCC-c--cc-e-ecChHHHHHHHHHHHHHHHHHh----cCC-CCCCEEEEcCCCCCCcHHHHHhcCcEEEEE
Q 001990 638 GEWLCTITGFD-S--FS-L-QPNAGAAGEYAGLMVIRAYHKA----RGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (985)
Q Consensus 638 ~~~la~l~G~~-~--~~-~-~~~sGa~g~~a~l~air~~~~~----~g~-~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v 707 (985)
++|+++++|++ . .. + ++++|++++..++.++|..... .|. ..+.+|++++.+|.+..+.++..|++++++
T Consensus 86 ~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i 165 (431)
T TIGR01788 86 VNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREV 165 (431)
T ss_pred HHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEE
Confidence 99999999998 2 22 2 2456666665555444422111 111 013478999999988888888899999999
Q ss_pred eCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHc------CCEEEEEccccccccCCC--
Q 001990 708 GTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGLT-- 777 (985)
Q Consensus 708 ~~~~~-g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~------g~lliVD~a~~~~~~g~~-- 777 (985)
|+|++ +.+|+++|+++|+ ++|.+|+++..| .+|.++ ||++|+++|+++ |+|+|||+||..+...+.
T Consensus 166 ~~d~~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~id-pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~ 241 (431)
T TIGR01788 166 PMDPGRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYE-DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYP 241 (431)
T ss_pred ecCCCceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccC-CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCC
Confidence 99876 5899999999998 789999999885 699999 899999999999 999999999963322111
Q ss_pred ----CCCcCCCcEEEeCCcccccccCCCCCCcceeeeeccc--ccCcCC--CCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 778 ----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLP--SHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 778 ----~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~--l~~~lp--g~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
+....++|.+++|+|||+. |.+|+|++++++. +.+.+. ....+.. .....+..++.|
T Consensus 242 ~~~~~~~~~~~DSis~s~HK~~~-----~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~---------~~~~t~~~sR~g- 306 (431)
T TIGR01788 242 DLEWDFRLPRVKSINVSGHKYGL-----VYPGVGWVIWRDEEALPEELIFHVNYLGGD---------EPTFTLNFSRPA- 306 (431)
T ss_pred CchhhcCCCCceEEEECchhccC-----CCCCcEEEEEeChHHcchhheecccccCCC---------CCCcceecCchH-
Confidence 1124578999999999863 3347889999864 323221 0011110 000011111111
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L 927 (985)
..++..|..|..+|.+|+.++.++.++++++|.++|++ .+++..++ +..+.++|.+.+.. ..+.+..++.++|
T Consensus 307 -~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~---~~~~iV~Fr~~~~~-~~~~~~~~l~~~L 381 (431)
T TIGR01788 307 -NQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG---SGIPLVAFKLKDDA-DPGYTLYDLSHRL 381 (431)
T ss_pred -HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC---CCceEEEEEeCCCC-CCCcCHHHHHHHH
Confidence 12345799999999999999999999999999999987 35554321 23445556654100 0135678899999
Q ss_pred HHCCCccCCCCCC--CC--CEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 928 MDYGFHGPTMSWP--VP--GTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 928 ~e~Gi~~~~~~~p--v~--~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.++||.+.....| +. -.+|+++....+++-++ +|+++|++++.++
T Consensus 382 ~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~---~~~~~~~~~~~~~ 430 (431)
T TIGR01788 382 RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAE---LLIEDIEAALAYL 430 (431)
T ss_pred HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHH---HHHHHHHHHHHhh
Confidence 9999986543323 22 35899998889999999 9999999988754
No 33
>PLN03032 serine decarboxylase; Provisional
Probab=99.94 E-value=8.9e-25 Score=247.32 Aligned_cols=295 Identities=17% Similarity=0.193 Sum_probs=214.2
Q ss_pred hcHHHHHHHHHHHHHHHhCCCccc---eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~~~---~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
....+++.++.+++++++|++... +++++|++++..++.+.|.+ .++.+|+++..+|.++.+.++..|+++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~------~~~~~vi~s~~~H~Sv~kaa~~lg~~~ 135 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMEA 135 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh------CCCcEEEeCCCceeHHHHHHHHcCCCC
Confidence 467899999999999999997632 56666776664444444432 134579999999999999999999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcC-----CEEEEEccccccccCCCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG-----GQVYMDGANMNAQVGLTS 778 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g-----~lliVD~a~~~~~~g~~~ 778 (985)
+.||++++|.+|+++|+++|++...++.+|+++..| .+|.++ ||++|+++|+++| +|+|||+|+..+...+..
T Consensus 136 ~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id-pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 136 VKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD-DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred eEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC-CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC
Confidence 999999999999999999998433367788888775 699999 8999999999997 589999998654443311
Q ss_pred -----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCC--ccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 779 -----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 779 -----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~--~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
....++|.+++|+||+++.|+ |+|++++++.+...+... ++.. . . ..+.+++. ..
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~~~Yl~~-~--------d--~ti~gSR~--g~ 276 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQNVEYLNS-R--------D--ATIMGSRN--GH 276 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccCCcccCC-C--------C--CcccCCCc--hH
Confidence 123479999999999875553 567899987655433211 1100 0 0 11222221 13
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~ 930 (985)
.++..|+.|..+|.+|+.+..++++++++|+.++|++ ++.+.. + |..+.+++..+ .... ..+
T Consensus 277 ~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~---p~~~~V~f~~~--------~~~~-----~~~ 339 (374)
T PLN03032 277 APLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL-N---ELSSTVVFERP--------MDEA-----FIK 339 (374)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-C---CCceEEEEcCC--------CcHh-----Hhh
Confidence 4567899999999999999999999999999999987 566543 2 23333333321 1111 226
Q ss_pred CCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 931 GFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 931 Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
||...+. ++.++++++..+|++-+| +|++.|+++
T Consensus 340 ~w~l~~~----~~~~hi~vm~~~~~~~id---~fi~dl~~~ 373 (374)
T PLN03032 340 KWQLACE----GDIAHVVVMPNVTVEKLD---EFVEELVEV 373 (374)
T ss_pred eeeeccc----CCEEEEEECCCCCHHHHH---HHHHHHhcc
Confidence 8887643 368999999999999999 999999763
No 34
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=1.7e-24 Score=246.89 Aligned_cols=299 Identities=17% Similarity=0.170 Sum_probs=217.6
Q ss_pred cHHHHHHHHHHHHHHHhCCCcc---ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~---~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~ 705 (985)
.+.++.+++.+++++++|++.. .+++++|++++..++.+.|.+ .++++|++++.+|.++.+.++..|++.+
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~------~~~~~ii~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL------FPDGTLYYSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh------CCCcEEEeCCCceehHHHHHHHcCCCCc
Confidence 5778899999999999999743 245566666654444333332 2457899999999999999999999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcC---CEEEEEccccccccCCCC---
Q 001990 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG---GQVYMDGANMNAQVGLTS--- 778 (985)
Q Consensus 706 ~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g---~lliVD~a~~~~~~g~~~--- 778 (985)
.|+++++|.+|+++|+++|++.+.+|.+|+++.+| .+|.++ |+++|+++|+++| +++|||+||..+...+..
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id-pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID-NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 99998899999999999998433358899999885 699999 8999999999998 699999998755443211
Q ss_pred --CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHH
Q 001990 779 --PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (985)
Q Consensus 779 --~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A 856 (985)
....++|.+++|+||+++.|+ |.|+++++++..+.+... ..... ... ..+.+++- ...++..
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~-~~yl~-----~~d---~t~~GSR~--g~~~l~l 278 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVD-VDYIG-----SRD---QTISGSRN--GHTALLL 278 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccC-ccccC-----CCC---CCccCCCC--cHHHHHH
Confidence 112389999999999985443 578899997665444211 00000 000 11222221 1235668
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC
Q 001990 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (985)
Q Consensus 857 ~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~ 935 (985)
|+.|..+|.+|+.+..++++++++|+.++|++ ++++.. .|..+.+++..+ + .++. +||.+.
T Consensus 279 w~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~----~p~~~~v~f~~~--------~-~~~~-----~~w~l~ 340 (380)
T PRK02769 279 WAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR----NPNSITVVFPCP--------S-ERIW-----KKWHLA 340 (380)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc----CCCceEEEEcCC--------C-HHHH-----hCeeEc
Confidence 99999999999999999999999999999987 555542 133444444321 2 2222 688876
Q ss_pred CCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 936 TMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 936 ~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.. ++.+|++++..+|++.|| .|++.|.+.....
T Consensus 341 ~~----~~~~hi~~~~~~~~~~~~---~f~~dl~~~~~~~ 373 (380)
T PRK02769 341 TS----GNQAHIITMPHHNKQQID---SLIDELIFDLKNP 373 (380)
T ss_pred cc----CCEEEEEECCCCCHHHHH---HHHHHHHHHHhcc
Confidence 44 368999999999999999 9999999877643
No 35
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=2.8e-24 Score=249.87 Aligned_cols=308 Identities=18% Similarity=0.135 Sum_probs=229.1
Q ss_pred hHHHHHHHHHHHHHHHhhCCC-CcceeeccchHHHHHHHHHHhhhh-cCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 207 QGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~-~~~~sl~~~~ta~~ea~~~a~~~~-~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
.-..+.+.++++.+|+++|++ +.++.+.+|+|.++..++.++... .++|++||+++.+|++....++.+++..|++++
T Consensus 58 ~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~ 137 (403)
T TIGR01979 58 VRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLK 137 (403)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEE
Confidence 334567888999999999998 568888899998877666554211 137899999999999999888877777899988
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEE
Q 001990 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (985)
Q Consensus 285 ~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-~~p~~~GaDi~v 353 (985)
.++. +++++ +++++++|++++| |++|.+.|+++|+++||++|++++||. .++.|.+ .+..++|+|+++
T Consensus 138 ~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~ 216 (403)
T TIGR01979 138 FIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDG-AQAVPHMPVDVQALDCDFYV 216 (403)
T ss_pred EEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEc-hhhcCccccCccccCCCEEE
Confidence 8754 34555 7888999999987 689999999999999999999999953 3455543 234578999999
Q ss_pred ecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEe-cccccccccccccCCCccchhHHHHHHHH
Q 001990 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 354 ~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~-l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
++++++.+| +|+|++++++++++.+++...|+..... +.+. ...+....|++.||+|+ ..++++.++
T Consensus 217 ~s~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~gt~~~---~~~~al~~a 284 (403)
T TIGR01979 217 FSGHKMYGP-----TGIGVLYGKEELLEQMPPFLGGGEMIAE----VSFEETTYNEAPHKFEAGTPNI---AGVIGLGAA 284 (403)
T ss_pred EecccccCC-----CCceEEEEchHHHhcCCCeecCCCceee----cccCccccCCChhhcCCCCccH---HHHHHHHHH
Confidence 999434333 4589999999998888776655421100 0000 00112233456788887 455555555
Q ss_pred HHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC----CcceEEEecCC--HHHHHHHHHHcCceeeee----
Q 001990 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV---- 502 (985)
Q Consensus 433 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~---- 502 (985)
+ .++...|++++.+++.+++++++++|+++++++++.+. ....++|.+++ ..++.+.|.++||.++..
T Consensus 285 l--~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~ 362 (403)
T TIGR01979 285 I--DYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCA 362 (403)
T ss_pred H--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhh
Confidence 5 55555688999999999999999999988449987432 23456676665 778999999999987531
Q ss_pred --------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 --------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 --------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.++.+|+|++.+||++|+++++++|+.
T Consensus 363 ~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~ 397 (403)
T TIGR01979 363 QPLMRRFGVPATCRASFYIYNTEEDIDALVEALKK 397 (403)
T ss_pred HHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHH
Confidence 157899999999999999999999973
No 36
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=3.4e-24 Score=236.10 Aligned_cols=292 Identities=16% Similarity=0.165 Sum_probs=226.4
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHH--hhhh-cCCCCEEEEcCCCChhHHHHHHHhhcCCCeEE
Q 001990 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC--NNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a--~~~~-~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v 283 (985)
.-..+++.++++.+|+++|+++.++.+++|||.+...++.. .... ++++++||++..+||+++..++.+ +.+|++|
T Consensus 40 ~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~V 118 (386)
T COG1104 40 REARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEV 118 (386)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeE
Confidence 34578899999999999999999999999999666655443 1111 136889999999999999999987 7789999
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001990 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (985)
Q Consensus 284 ~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~ 352 (985)
.++++ ++|++ +.++|.+|.+.+. |.+|+|+||++|+++|+++|++|+||+ ..++|-++ ++.++|+|++
T Consensus 119 tyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDA-vQa~Gkipi~~~~~~vD~l 197 (386)
T COG1104 119 TYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDA-VQAVGKIPIDLEELGVDLL 197 (386)
T ss_pred EEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEeh-hhhcCceeccccccCcceE
Confidence 98876 46777 8999999999886 679999999999999999999999954 34777554 5678899999
Q ss_pred EecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001990 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 353 v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
..|+++|++|. |.|++|+++.. .+.+.+.|. .+ |+ .+-.||.|+ .+..|+.+|
T Consensus 198 s~SaHK~~Gpk-----GiGaLyv~~~~--~~~p~i~GG------gQ---------E~--g~RsGTenv---~~Ivg~~~A 250 (386)
T COG1104 198 SFSAHKFGGPK-----GIGALYVRPGV--RLEPLIHGG------GQ---------ER--GLRSGTENV---PGIVGFGKA 250 (386)
T ss_pred EeehhhccCCC-----ceEEEEECCCC--ccCceeccC------cC---------CC--CCCCCCccH---HHHHHHHHH
Confidence 99999987664 57899997654 245556662 11 11 122699998 566666666
Q ss_pred HHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--CC-cceEEEecCC--HHHHHHHHHHcCceeee-----
Q 001990 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PF-FDTVKVKCAD--AHAIASAAYKIEMNLRV----- 501 (985)
Q Consensus 433 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~--~~-~~~~~i~~~~--~~~l~~~L~~~Gi~~~~----- 501 (985)
+ .+..+.++....+...+-++|.++|.+. +.+.+.+. ++ .+.+.|.+++ ++.+.-.|..+||.++.
T Consensus 251 ~---~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACs 327 (386)
T COG1104 251 A---EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACS 327 (386)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEecccccc
Confidence 5 3334567778888889999999999976 44666543 33 2467777887 88888889889998742
Q ss_pred --------------ec----CCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 502 --------------VD----SNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 502 --------------~~----~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
.+ .+.||+|++.+||++|+|+++++|...
T Consensus 328 S~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~ 374 (386)
T COG1104 328 SGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI 374 (386)
T ss_pred CCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 01 378999999999999999999999853
No 37
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=2.1e-24 Score=250.91 Aligned_cols=303 Identities=13% Similarity=0.081 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcC-CCCEEEEcCCCChhHHHHHHHhhcCCCeEE----EE
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKV----VV 285 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~-~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v----~~ 285 (985)
....++++ + +++|+++.++.+.+++|.++..++.++ +..+ ++++|++++.+||++..+|+..++..|+++ +.
T Consensus 71 ~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~ 147 (406)
T TIGR01814 71 TLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQ 147 (406)
T ss_pred hhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEE
Confidence 33333344 4 899999889999999998888766654 2211 234788989999999988876566678776 33
Q ss_pred eCc--------hhhhc-c---CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceE
Q 001990 286 SDL--------KDIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADI 351 (985)
Q Consensus 286 ~~~--------~~l~~-l---~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi 351 (985)
++. +++++ + +++|++|+++++ |.+|.+.|+++|+++||++|++++||+ .+++|.++ +..++|+|+
T Consensus 148 ~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~-aq~~G~~~id~~~~gvD~ 226 (406)
T TIGR01814 148 IEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDL-AHAVGNVPLDLHDWGVDF 226 (406)
T ss_pred eccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEc-ccccCCcccccccCCCCE
Confidence 332 34544 3 578999999987 568999999999999999999999943 44666543 446899999
Q ss_pred EEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHH
Q 001990 352 VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (985)
Q Consensus 352 ~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~ 430 (985)
+++++ |+|+ |||| |+++++++....+.+++.||....... .|........+..|++.||+|+ .+.+++.
T Consensus 227 ~~~s~hK~l~-----g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~ 296 (406)
T TIGR01814 227 ACWCTYKYLN-----AGPG-AGAFVHEKHAHTERPRLAGWWGHARPT-RFKMDNTLGLIPCGFRISNPPI---LSVAALR 296 (406)
T ss_pred EEEcCccccC-----CCCC-eEEEEehhhhhhcCCCCCcccCCCCcc-ccccccccCCCccceeeCCccH---HHHHHHH
Confidence 99999 6663 4577 667776655545666667762211110 0111110112234677899998 5677777
Q ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC-C---CEEEcCCC----CcceEEEecC-CHHHHHHHHHHcCceeee
Q 001990 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLP----FFDTVKVKCA-DAHAIASAAYKIEMNLRV 501 (985)
Q Consensus 431 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g---~~~~~~~~----~~~~~~i~~~-~~~~l~~~L~~~Gi~~~~ 501 (985)
+++ .++...|++++.+++.++++++++.|+++ | +++++.+. ....++|..+ .+.++.++|.++||.+..
T Consensus 297 ~al--~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~ 374 (406)
T TIGR01814 297 GSL--DIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDK 374 (406)
T ss_pred HHH--HHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEec
Confidence 776 56666789999999999999999999875 2 37777431 2235777776 488999999999998765
Q ss_pred ecCCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 001990 502 VDSNTVTASF-DETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 ~~~~~lris~-~~~~t~edid~ll~~l~~ 529 (985)
..++.+|+|+ +.+||++|||+++++|+.
T Consensus 375 ~~~~~iRiS~~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 375 REPSVIRVAPVPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred cCCCeEEEechhccCCHHHHHHHHHHHHH
Confidence 4457899999 689999999999999973
No 38
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=6.2e-24 Score=243.48 Aligned_cols=283 Identities=17% Similarity=0.136 Sum_probs=215.5
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHh-hhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEE
Q 001990 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~-~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~ 285 (985)
....+.+.++++.+++++|.++.++.++.|+|.++..++.++ ....++|++|++++.+||++...|..+. ..|++++.
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~ 117 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTY 117 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEE
Confidence 445677889999999999998888888899987766554432 2112378999999999999998887654 57888888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001990 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (985)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-~~p~~~GaDi~v~ 354 (985)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.|.+ .+..++|+|++++
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~-a~~~g~~~~~~~~~~~D~~~~ 196 (364)
T PLN02651 118 LPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDA-AQAVGKIPVDVDDLGVDLMSI 196 (364)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEc-chhhCCcccCcccCCCCEEEe
Confidence 754 34555 7889999999886 689999999999999999999999953 3456644 3567899999999
Q ss_pred cCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001990 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (985)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y 434 (985)
++++|++| +|+|+++++++...++.+.+.|+.. ..+++.||+|+ .+++++.+++
T Consensus 197 s~hK~~gp-----~G~g~l~v~~~~~~~l~p~~~g~~~-----------------~~~~~~GT~~~---~~~~~l~~al- 250 (364)
T PLN02651 197 SGHKIYGP-----KGVGALYVRRRPRVRLEPLMSGGGQ-----------------ERGRRSGTENT---PLVVGLGAAC- 250 (364)
T ss_pred chhhhCCC-----CceEEEEEcCCCCCCCCccccCCCc-----------------cCCccCCCccH---HHHHHHHHHH-
Confidence 99556544 4689999999888888776665211 11356799998 5777888887
Q ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCC--CC---cceEEEecCC--HHHHHHHHHHcCceeee-----
Q 001990 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--PF---FDTVKVKCAD--AHAIASAAYKIEMNLRV----- 501 (985)
Q Consensus 435 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~--~~---~~~~~i~~~~--~~~l~~~L~~~Gi~~~~----- 501 (985)
.++.. +.+++.+++.+++++++++|++ ++|++++.+ +. ...++|..++ +.+++++|.+ |.++.
T Consensus 251 -~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~ 326 (364)
T PLN02651 251 -ELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACT 326 (364)
T ss_pred -HHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcC
Confidence 33333 4589999999999999999986 534998853 21 2357777776 7889999965 65521
Q ss_pred ------------e------cCCeEEEEeccCCCHHHHH
Q 001990 502 ------------V------DSNTVTASFDETTTLEDVD 521 (985)
Q Consensus 502 ------------~------~~~~lris~~~~~t~edid 521 (985)
+ ..+.+|+|++.+||++|||
T Consensus 327 ~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 327 SASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 0 1378999999999999986
No 39
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=1.2e-23 Score=244.19 Aligned_cols=297 Identities=20% Similarity=0.192 Sum_probs=221.6
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEE
Q 001990 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (985)
Q Consensus 206 sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~ 285 (985)
+++..+.+.++++.+++++|.+..++.+..|+|.++..+..++....++||+||+++..|+++...+...++..|++++.
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 134 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKW 134 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE
Confidence 46677888999999999999987778788888876655544432111378999999999999988886667778998887
Q ss_pred eCc---------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEE
Q 001990 286 SDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (985)
Q Consensus 286 ~~~---------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-~~p~~~GaDi~v 353 (985)
++. +++++ ++++|++|++.+| |++|.+.|+++|+++||++|++++||. .++.|.. .+..++|+|+++
T Consensus 135 ~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~ 213 (397)
T TIGR01976 135 ARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDA-VHYAPHGLIDVQATGADFLT 213 (397)
T ss_pred EeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEeh-hhhccccCCCHHHcCCCEEE
Confidence 754 34555 7788999999998 689999999999999999999999953 2333322 234678999999
Q ss_pred ecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001990 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 354 ~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
+++ |++ ||.+|++++++++++++.+....+ .. .....|++.||.|+ ..+.++.++
T Consensus 214 ~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~----------~~----~~~~~~~~~gt~~~---~~~~~l~~a 269 (397)
T TIGR01976 214 CSAYKFF-------GPHMGILWGRPELLMNLPPYKLTF----------SY----DTGPERFELGTPQY---ELLAGVVAA 269 (397)
T ss_pred Eechhhc-------CCceEEEEEcHHHHhhCCCccccC----------cc----CCCcchhcCCCCCH---HHHHHHHHH
Confidence 998 544 245799999999888875433221 11 11223567888887 445556666
Q ss_pred H-HHHHcCc-----------chHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCcceEEEecCC--HHHHHHHHHH
Q 001990 433 M-YAVYHGP-----------EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAYK 494 (985)
Q Consensus 433 ~-y~~~~g~-----------~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~~~~~i~~~~--~~~l~~~L~~ 494 (985)
+ ++...|. ++++++.+++.+++++++++|+++++++++.+ ...+.+.+..++ +.++.++|.+
T Consensus 270 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (397)
T TIGR01976 270 VDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLAD 349 (397)
T ss_pred HHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHH
Confidence 5 3333442 14788899999999999999999866888743 234456666654 7889999999
Q ss_pred cCceeeee---------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001990 495 IEMNLRVV---------------DSNTVTASFDETTTLEDVDKLFIVF 527 (985)
Q Consensus 495 ~Gi~~~~~---------------~~~~lris~~~~~t~edid~ll~~l 527 (985)
+||.++.. ..+.+|+|++.+||++|+++|+++|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99988642 1368999999999999999999875
No 40
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.93 E-value=9.4e-24 Score=245.62 Aligned_cols=313 Identities=16% Similarity=0.155 Sum_probs=216.7
Q ss_pred hcHHHHHHHHHHHHHHHhCC-Cccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcC
Q 001990 628 QGYQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCG 701 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~-~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G 701 (985)
.-..+.++++++.+++++|. +... +++++++++.. .+++.+... ...++++||+++..|.+.. ..++..|
T Consensus 63 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~---~~~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g 138 (406)
T PRK09295 63 AQATEKMENVRKQAALFINARSAEELVFVRGTTEGIN---LVANSWGNS-NVRAGDNIIISEMEHHANIVPWQMLCARVG 138 (406)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH---HHHHHhhhh-cCCCcCEEEECcchhhHHHHHHHHHHHHcC
Confidence 34567788999999999997 4433 44444555442 223322100 1136789999998776542 2245689
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Q 001990 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (985)
Q Consensus 702 ~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g 780 (985)
++++.++.++++.+|+++|+++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|++|..+...+ +..
T Consensus 139 ~~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~ 213 (406)
T PRK09295 139 AELRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTEN-PLAEMIALAHQHGAKVLVDGAQAVMHHPV-DVQ 213 (406)
T ss_pred cEEEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccC-CHHHHHHHHHHcCCEEEEEcccccCcccc-Cch
Confidence 999999998889999999999997 78999999998 5799998 89999999999999999999997655443 335
Q ss_pred cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC-------CC-----CCCCCCCCCCCcccccch
Q 001990 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-------GI-----PAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 781 ~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~-------~~-----~~~~~~~~t~~i~s~~~g 848 (985)
.+++|++++|+||.+ |++|+|++++++++.+.+++...|++. .. ..++.+.||+++.+
T Consensus 214 ~~~~D~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~---- 283 (406)
T PRK09295 214 ALDCDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGG---- 283 (406)
T ss_pred hcCCCEEEeehhhcc------CCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHH----
Confidence 678999999999965 334789999998887767654333211 00 00123445555432
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
+.+..+++..+...|+.++.++...++++++++|++...+...++.. ....+.+.++ +.+..++.+.|.
T Consensus 284 ----~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~-~~~iv~~~~~------~~~~~~~~~~L~ 352 (406)
T PRK09295 284 ----IIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN-RLGVIAFNLG------KHHAYDVGSFLD 352 (406)
T ss_pred ----HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC-CceEEEEEEC------CcCHHHHHHHHH
Confidence 12223444444445666667778888899999998633332223211 1233445543 457788999999
Q ss_pred HCCCccCC---CCC------CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 929 DYGFHGPT---MSW------PVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 929 e~Gi~~~~---~~~------pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
++||.+.. +.. ..++.+|+|++.+||++||| +|+++|+++..
T Consensus 353 ~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did---~l~~~l~~i~~ 403 (406)
T PRK09295 353 NYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD---RLVAGLQRIHR 403 (406)
T ss_pred hCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHH---HHHHHHHHHHH
Confidence 99998743 111 13478999999999999999 99999998754
No 41
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=1.7e-23 Score=240.66 Aligned_cols=360 Identities=18% Similarity=0.227 Sum_probs=233.5
Q ss_pred CHHHHHHHHHHHhcCccCcCcccccccceecccCccccccc-cccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCC
Q 001990 569 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP-VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (985)
Q Consensus 569 se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~-~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~ 647 (985)
||+|++..+.++-+..+....+...+..|+++.+...+... ....... . + ....|..++.+++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~---~-~~~~~~~~~~~~~~~~la~~~g~ 74 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKAYDMFIETNLG--D---P-GLFPGTKKIEEEVVGSLGNLLHL 74 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHHHHHHhhcCCC--C---c-ccCccHHHHHHHHHHHHHHHhCC
Confidence 68999999999887776653333323345544433222111 1011111 1 1 12346667888999999999999
Q ss_pred Cccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 001990 648 DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEA 726 (985)
Q Consensus 648 ~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~iDle~L~~~i~~ 726 (985)
+... +..++|++++..++.+++... ..+ .++++||+++..|.++...++..|++++.+++++++.+|+++++++++
T Consensus 75 ~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~- 151 (373)
T TIGR03812 75 PDAYGYIVSGGTEANIQAVRAAKNLA-REE-KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID- 151 (373)
T ss_pred CCCCeEEeccHHHHHHHHHHHHHHHH-hcc-CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHh-
Confidence 7643 555666655533333333211 111 245789999988877777788899999999998889999999999997
Q ss_pred cCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC---------CCCcCCCcEEEeCCccccc
Q 001990 727 NRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT---------SPGYIGADVCHLNLHKTFC 796 (985)
Q Consensus 727 ~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~---------~~g~~g~Di~~~s~hKtl~ 796 (985)
+++.++++..| |++|.+. |+++|+++||++|+++|||++|..+..++. .....++|++++++|||+.
T Consensus 152 --~~~~~vv~~~~~~~tG~~~-~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~ 228 (373)
T TIGR03812 152 --DNTIGIVGIAGTTELGQID-DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL 228 (373)
T ss_pred --hCcEEEEEECCCCCCCccC-CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC
Confidence 55644444445 5799998 899999999999999999999853322111 1112478999999999753
Q ss_pred ccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHH
Q 001990 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (985)
Q Consensus 797 ~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~ 876 (985)
.| .|.+|+++.++++.+.+.... .+... .... ...+++ +...++++++.+..++.+|+.+..++..
T Consensus 229 ~~----~~~G~~~~~~~~~~~~l~~~~-~~~~~----~~~~---~~~gt~--~~~~~~~~~~~l~~l~~~g~~~~~~~~~ 294 (373)
T TIGR03812 229 SP----IPAGGILFRSKSYLKYLSVDA-PYLTV----KKQA---TITGTR--SGASAAATYAVIKYLGREGYRKIVAECM 294 (373)
T ss_pred Cc----CCceEEEEeCHHHHhhhcccC-cccCC----CCCc---ceEeec--hhHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 22 122345555666655442100 00000 0000 000011 1123445677788888899988889999
Q ss_pred HHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCH
Q 001990 877 LNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (985)
Q Consensus 877 ~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~ 955 (985)
+++++|+++|++ ++..... +..+.+.+.++ +..++.++|.++||.+..... ++.+|++++..+|+
T Consensus 295 ~~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~ 360 (373)
T TIGR03812 295 ENTRYLVEELKKIGFEPVIE----PVLNIVAFEVD--------DPEEVRKKLRDRGWYVSVTRC--PKALRIVVMPHVTR 360 (373)
T ss_pred HHHHHHHHHHHhCCCeEEcC----CCceEEEEEeC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCH
Confidence 999999999987 4433322 22344444432 356899999999999865432 47899999999999
Q ss_pred HhhchHHHHHHHHHHH
Q 001990 956 VCHNREDLFFQILLSL 971 (985)
Q Consensus 956 eeId~~~~~i~aL~~i 971 (985)
+|+| +|+++|+++
T Consensus 361 edid---~l~~~L~~~ 373 (373)
T TIGR03812 361 EHIE---EFLEDLKEI 373 (373)
T ss_pred HHHH---HHHHHHhhC
Confidence 9999 999999763
No 42
>PLN02263 serine decarboxylase
Probab=99.93 E-value=2.2e-23 Score=238.81 Aligned_cols=299 Identities=16% Similarity=0.200 Sum_probs=217.6
Q ss_pred cHHHHHHHHHHHHHHHhCCCcc---ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~---~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~ 705 (985)
+..++..++.+|+++++|.+.. .++.++|+++++.++.+.|.+ .++..+++|+.+|.++.+++.+.|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~------~~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhh------cCCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 6889999999999999999752 466778888887777776653 1344688899999999999999999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCC-----EEEEEccccccccCCCC-
Q 001990 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGG-----QVYMDGANMNAQVGLTS- 778 (985)
Q Consensus 706 ~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~-----lliVD~a~~~~~~g~~~- 778 (985)
.||++++|++|+++|+++|++...++.+|+.+.++ .+|.++ ||++|+++|+++|+ |+|||||..-....+.+
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD-pi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~ 282 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD-DLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR 282 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC-CHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence 99999999999999999998543345667777776 599999 89999999999997 99999986422222211
Q ss_pred -C---CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHH
Q 001990 779 -P---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 779 -~---g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
+ +..++|.++.++|||++.|++ .|++.+|+.....+.... ++... .. ..+.+++-| ..++
T Consensus 283 ~~~~df~~~vDSIsvD~HK~l~~P~~-----cgvll~R~~~~~~~~~~~-----~Yl~~-~d---~ti~gSR~g--~~al 346 (470)
T PLN02263 283 APKVTFKKPIGSVSVSGHKFVGCPMP-----CGVQITRMEHINVLSSNV-----EYLAS-RD---ATIMGSRNG--HAPI 346 (470)
T ss_pred ccccCCCcCccEEEECCccccCCCcC-----EEEEEEehhhHhhhccCh-----HhhCC-CC---CCcCCCCCc--HHHH
Confidence 1 223499999999999988765 457888865433221100 00000 00 112222222 2356
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCc
Q 001990 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (985)
Q Consensus 855 ~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~ 933 (985)
..|+.|+.+|.+|+++..++++++++++.++|++ ++.+... +..+.+++..+ . .+ +..+||.
T Consensus 347 ~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~----p~s~~V~f~~p--------~-~~----~~~~gW~ 409 (470)
T PLN02263 347 FLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLN----ELSSTVVFERP--------K-DE----EFVRRWQ 409 (470)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeC----CCceEEEEecC--------c-hH----HhhcceE
Confidence 7899999999999999999999999999999987 5554432 23334444421 1 11 2357998
Q ss_pred cCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 934 GPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 934 ~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.... ++.++++++...+++-+| +|++.|++....
T Consensus 410 L~~~----~~~~Hivvmphv~~~~id---~fi~DL~~~~~~ 443 (470)
T PLN02263 410 LACQ----GNIAHVVVMPSVTIEKLD---YFLKELVEKRST 443 (470)
T ss_pred EccC----CCcEEEEEcCCCCHHHHH---HHHHHHHHHHhh
Confidence 7643 356999999988999999 999999988764
No 43
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.93 E-value=1.1e-23 Score=244.84 Aligned_cols=313 Identities=15% Similarity=0.132 Sum_probs=215.9
Q ss_pred hcHHHHHHHHHHHHHHHhCC-Cccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcC
Q 001990 628 QGYQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCG 701 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~-~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G 701 (985)
....+.++++++.+++++|. +... ++.++++++... +++.+.. ....++++||+++..|.++. ..++..|
T Consensus 59 ~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~---~~~~~~~-~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g 134 (401)
T PRK10874 59 QRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL---VAQSYAR-PRLQPGDEIIVSEAEHHANLVPWLMVAQQTG 134 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH---HHHHhhh-ccCCCcCEEEECCcchHHHHHHHHHHHHHhC
Confidence 44567788999999999999 4444 445555555433 3333211 01136789999998776532 2246789
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Q 001990 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (985)
Q Consensus 702 ~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g 780 (985)
++++.+|.+.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||++|..+...+ ...
T Consensus 135 ~~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~l~~~~g~~~ivD~a~~~g~~~~-~~~ 209 (401)
T PRK10874 135 AKVVKLPLGADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCP-DLARAITLAHQAGMVVMVDGAQGAVHFPA-DVQ 209 (401)
T ss_pred CEEEEEecCCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEECCcccccccC-Cch
Confidence 999999998888999999999997 789999999984 799998 89999999999999999999996554433 334
Q ss_pred cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC----C--C-----CCCCCCCCCCCcccccchh
Q 001990 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----G--I-----PAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 781 ~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~----~--~-----~~~~~~~~t~~i~s~~~g~ 849 (985)
.+++|++++|+||+| |.+|+|++++++++.+.+++...++.. + . ..++.+.||+++.+
T Consensus 210 ~~~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~----- 278 (401)
T PRK10874 210 ALDIDFYAFSGHKLY------GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAG----- 278 (401)
T ss_pred hcCCCEEEEeccccc------CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHH-----
Confidence 678999999999965 335789999998877766543211110 0 0 00122334444331
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e 929 (985)
...+. +.+..+...|+.+..++...+++++.+.|++..++...++... ..+.+.++ +.+..++.+.|.+
T Consensus 279 ~~al~---~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~--~i~~~~~~------~~~~~~~~~~L~~ 347 (401)
T PRK10874 279 VIGLS---AALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDS--SLLAFDFA------GVHHSDLVTLLAE 347 (401)
T ss_pred HHHHH---HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC--cEEEEEEC------CcCHHHHHHHHHH
Confidence 12222 3334444455666667777888999999986333322221111 23444553 4567899999999
Q ss_pred CCCccCCCCC---------CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 930 YGFHGPTMSW---------PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 930 ~Gi~~~~~~~---------pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+||.+..... ...+.+|+|++.++|++||| +|+++|+++++.
T Consensus 348 ~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid---~ll~al~~~~~~ 398 (401)
T PRK10874 348 YGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVD---ALVNAVDRALEL 398 (401)
T ss_pred CCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHH---HHHHHHHHHHHH
Confidence 9998754221 12478999999999999999 999999988764
No 44
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=2.2e-23 Score=240.44 Aligned_cols=292 Identities=17% Similarity=0.179 Sum_probs=218.9
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEE
Q 001990 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (985)
Q Consensus 206 sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~ 285 (985)
+....+.+.++++.+++++|.++.++.+++|+|.++.+++.++.....++++|+++..+||++...++.+. ..|++++.
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-~~G~~v~~ 115 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHH-HcCCEEEE
Confidence 44567788899999999999998889899999988887765542111256899999999999999887654 47999888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001990 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (985)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~ 354 (985)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ ..+.|..+ +..++|+|++++
T Consensus 116 v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-~~~~g~~~~~~~~~~~D~~~~ 194 (379)
T TIGR03402 116 LPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDA-VQAVGKIPIDLKEMNIDMLSL 194 (379)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEEC-cccccccccCcccCCCCEEEE
Confidence 754 34555 7788999999886 789999999999999999999999953 34556443 446799999999
Q ss_pred cCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001990 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (985)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y 434 (985)
+++++++| +|+|+++++++. .+.+.+.|.. +..+++.||.|+ .+++++.+++
T Consensus 195 s~~K~~gp-----~G~g~l~v~~~~--~~~p~~~g~~-----------------~~~~~~~gt~~~---~~~~~l~~al- 246 (379)
T TIGR03402 195 SGHKLHGP-----KGVGALYIRKGT--RFRPLLRGGH-----------------QERGRRAGTENV---PGIVGLGKAA- 246 (379)
T ss_pred cHHHcCCC-----CceEEEEECCCC--CCCCcccCCc-----------------cCCCcCCCCccH---HHHHHHHHHH-
Confidence 99447544 468999998764 2333333310 011234688887 5677777776
Q ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCC--Cc-ceEEEecCC--HHHHHHHHHHcCceeeee------
Q 001990 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP--FF-DTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (985)
Q Consensus 435 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~~--~~-~~~~i~~~~--~~~l~~~L~~~Gi~~~~~------ 502 (985)
.++ .++++++.+++.++.++++++|++ +.++++..++ .. ..++|.++. +.++.+.|.++||.++.-
T Consensus 247 -~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~ 324 (379)
T TIGR03402 247 -ELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSG 324 (379)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCC
Confidence 222 346788889999999999999985 6448877432 21 245555554 889999998899987521
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 -----------------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..+.+|+|++.+||++|||+++++|+.
T Consensus 325 ~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 325 SLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999974
No 45
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=2e-23 Score=244.26 Aligned_cols=316 Identities=15% Similarity=0.130 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHhCCCc-cc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEE
Q 001990 631 QEMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI 704 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~-~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v 704 (985)
.+.++++++.+++++|.+. .. ++.++++++. .++++.+... ...++++||++...|++... .++..|+++
T Consensus 75 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al---~~i~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 75 TDAYELARKKVAAFINASTSREIVFTRNATEAI---NLVAYTWGLA-NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHH---HHHHHHhhhh-cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 3567789999999999853 33 4445555443 2223322100 11367899999887865432 245689999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.++++.++.+|+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|++|..+...+ +..+++
T Consensus 151 ~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~a~~~g~~~~-~~~~~~ 225 (424)
T PLN02855 151 KFVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSIL-PVEDIVHWAHAVGAKVLVDACQSVPHMPV-DVQTLG 225 (424)
T ss_pred EEEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCcCC-CchhcC
Confidence 999998778899999999997 78999999998 5799998 89999999999999999999997655443 345678
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCC------C--C---CCCCCCCCCCcccccchhhhH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG------I--P---APEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~------~--~---~~~~~~~t~~i~s~~~g~~~~ 852 (985)
+|++++++||.+ |++|+|++++++++.+.+++...|++.. . . ..+.+.||+++..
T Consensus 226 ~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~-------- 291 (424)
T PLN02855 226 ADFLVASSHKMC------GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGE-------- 291 (424)
T ss_pred CCEEEeeccccc------CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHH--------
Confidence 999999999954 3447999999988877776543333210 0 0 0112344444331
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCC----ceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG----TVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~----~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
+....+.+..+...|+.++.++...+++++++.|++..++...++.. ...+.+.+.++ +.+..++.+.|.
T Consensus 292 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~------~~~~~~v~~~L~ 365 (424)
T PLN02855 292 AIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE------GIHPTDLSTFLD 365 (424)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC------CcCHHHHHHHhc
Confidence 12223444555455777777888889999999997632332222211 11234455554 467789999998
Q ss_pred HC-CCccCCCC---C------CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 929 DY-GFHGPTMS---W------PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 929 e~-Gi~~~~~~---~------pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
++ ||.+.... . ..++.+|+|++.++|++||| +|+++|+++++.++++
T Consensus 366 ~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~---~l~~~l~~~~~~~~~~ 422 (424)
T PLN02855 366 QQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVD---AFIHALKDTIAFFSSF 422 (424)
T ss_pred ccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHH---HHHHHHHHHHHHHHhh
Confidence 87 99875311 1 12478999999999999999 9999999998876654
No 46
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=1.7e-23 Score=242.90 Aligned_cols=311 Identities=15% Similarity=0.120 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHHHhCCC-ccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcE
Q 001990 630 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~-~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~ 703 (985)
..+.++++++.+++++|.+ ... ++.+++++|...+ ++.+.. +...++++||+++..|.++. ..++..|++
T Consensus 58 ~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~---~~~~~~-~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 58 LTARYELARQQVARFLNAPDAENIVWTRGTTESINLV---AQSYAR-PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH---HHHhhh-ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence 4466888999999999985 433 4455555554333 332211 01136789999998876532 235678999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC
Q 001990 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (985)
Q Consensus 704 v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~ 782 (985)
++.+|.+.++.+|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|++|..+...+ ....+
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~ 208 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCP-DLARAITLAHQYGAVVVVDGAQGVVHGPP-DVQAL 208 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhc---cCceEEEEECccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCCCC-Chhhc
Confidence 9999998888899999999997 78999999998 5799998 89999999999999999999996544332 23457
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC----C--C-----CCCCCCCCCCCcccccchhhh
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----G--I-----PAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~----~--~-----~~~~~~~~t~~i~s~~~g~~~ 851 (985)
++|++++|+||.| |.+|+|++++++++.+.++....+... + . ..++.+.||+++.+ ..
T Consensus 209 ~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~-----~~ 277 (398)
T TIGR03392 209 DIDFYAFSGHKLY------GPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAG-----VI 277 (398)
T ss_pred CCCEEEEeccccc------CCCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHH-----HH
Confidence 8999999999966 334789999998877666543222110 0 0 00122445555432 12
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
.+. +.+..+...|+.+..++..++++++.+.|++...+...++.. ...+.+.++ +.+..++.+.|.++|
T Consensus 278 a~~---~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~--~~i~~~~~~------~~~~~~l~~~L~~~g 346 (398)
T TIGR03392 278 GLS---AALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPG--SSLLAFDFA------GVHHSDLAALLAESG 346 (398)
T ss_pred HHH---HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--CcEEEEEeC------CcCHHHHHHHHHhCC
Confidence 222 334444445666666777888899999987633332222211 122344443 467789999999999
Q ss_pred CccCCCCC---------CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 932 FHGPTMSW---------PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 932 i~~~~~~~---------pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
|.+..... ..++.||+|++.++|++|+| +|+++|++++++
T Consensus 347 I~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~---~l~~~l~~~~~~ 395 (398)
T TIGR03392 347 IALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVD---ALVDAVGAALEL 395 (398)
T ss_pred EEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHH---HHHHHHHHHHHH
Confidence 98753211 12478999999999999999 999999988765
No 47
>PLN02590 probable tyrosine decarboxylase
Probab=99.92 E-value=3.6e-23 Score=243.14 Aligned_cols=384 Identities=13% Similarity=0.053 Sum_probs=250.2
Q ss_pred cccCCHHHHHHHHHHHhcCccCcCccccccccee---cccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHH
Q 001990 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCT---MKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (985)
Q Consensus 565 ~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~---~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~l 641 (985)
..+.+.+++++.+.+.............++|+-+ .+.....++....+ +-+.+.. +.+++..++..++.+|+
T Consensus 105 ~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~----n~~~~~~-~~sPa~t~lE~~vi~wl 179 (539)
T PLN02590 105 ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGL----SVVGFTW-LTSPAATELEIIVLDWL 179 (539)
T ss_pred CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhc----ccccCCc-ccCchhHHHHHHHHHHH
Confidence 4567888999999876555533333456676421 11111223322111 2222222 55778889999999999
Q ss_pred HHHhCCCcc--------ceecChHHHHHHHHHHHHHHHHHh-cCC--CCCCEEEEcCCCCCCcHHHHHhcCc---EEEEE
Q 001990 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHKA-RGD--HHRNVCIIPVSAHGTNPATAAMCGM---KIVSV 707 (985)
Q Consensus 642 a~l~G~~~~--------~~~~~sGa~g~~a~l~air~~~~~-~g~--~~~~~Vlv~~~~Hg~~~~~~~~~G~---~v~~v 707 (985)
++++|++.. .++.++|+++++.++.++|..... .|. .++-.|++++.+|.+..+++.+.|+ +++.|
T Consensus 180 ~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V 259 (539)
T PLN02590 180 AKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL 259 (539)
T ss_pred HHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE
Confidence 999999852 356777888888888887764322 121 1233555688899999999999998 68999
Q ss_pred eCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCC---
Q 001990 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--- 778 (985)
Q Consensus 708 ~~~~--~g~iDle~L~~~i~~~---~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~--- 778 (985)
|+|. ++++|+++|+++|++. +..+.+|+.+..+ .+|.++ ||++|+++|++||+|||||+|+.-.......
T Consensus 260 p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD-pl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~ 338 (539)
T PLN02590 260 KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD-PLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRK 338 (539)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCeEEEecchhhhhhcChhhHH
Confidence 9984 5799999999999742 1234567777775 499999 8999999999999999999987422211100
Q ss_pred --CCcCCCcEEEeCCcccccccCCCCCCcceeeeeccc--ccC-------cCCCCccccCCCCCCCCCCCCCCCcccccc
Q 001990 779 --PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP-------FLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (985)
Q Consensus 779 --~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~--l~~-------~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~ 847 (985)
.|-..+|.++.++|||+..|+++ |++.+++. +.. ++.... ..... .......+.. ++
T Consensus 339 ~~~Gie~ADSit~D~HK~l~~p~~c-----g~llvr~~~~l~~a~~~~~~YL~~~~-~~~~~--~~d~~d~~i~-ls--- 406 (539)
T PLN02590 339 FIDGIENADSFNMNAHKWLFANQTC-----SPLWVKDRYSLIDALKTNPEYLEFKV-SKKDT--VVNYKDWQIS-LS--- 406 (539)
T ss_pred HhcCCccCCEEEECchhhcCcCcCE-----EEEEecCHHHHHHHhhcCHHHhCCcc-ccccc--CCCccccCCC-CC---
Confidence 12345899999999999888765 57778753 211 221100 00000 0000001111 11
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCC------
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIE------ 919 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~------ 919 (985)
....++..|..|+.+|.+|+.+..++.++++++|.+.|++ .++++.+ +.++.++|.+.+ .+.+
T Consensus 407 -Rr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~----~~l~iVcFr~~~----~~~~~~~~~~ 477 (539)
T PLN02590 407 -RRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT----RYFSLVCFRLAP----VDGDEDQCNE 477 (539)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CceEEEEEEecC----CCCCHHHHHH
Confidence 2234677899999999999999999999999999999987 4666532 345667776542 0111
Q ss_pred -HHHHHHHHHHCCCcc-CCCCCCCCCEEEEecc-CCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 920 -PEDVAKRLMDYGFHG-PTMSWPVPGTLMIEPT-ESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 920 -~~~l~~~L~e~Gi~~-~~~~~pv~~~lris~t-~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
..++.++|.+.|... ....+.-...||+|+. +.+|++||| .+++.|.+...++.++
T Consensus 478 ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~---~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 478 RNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVT---EAWQIIQKHASKFTRN 536 (539)
T ss_pred HHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHH---HHHHHHHHHHHHhccc
Confidence 235666777777653 2211111246899884 567899999 9999998887766543
No 48
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=8.2e-23 Score=235.07 Aligned_cols=308 Identities=18% Similarity=0.147 Sum_probs=229.2
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCC-CcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEE
Q 001990 205 IAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~-~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v 283 (985)
.++...+.+.++++.+++++|.+ +.++.+++|+|.++..++.++.....++++||++...|++....+..+++..|+++
T Consensus 37 ~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 37 LSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEE
Confidence 34566777888999999999998 66788889999887776666532111679999999999998877776666788888
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001990 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (985)
Q Consensus 284 ~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~ 352 (985)
+.++. +++++ +++++++|++++| |++|.+.|+++|.++||++|+++++|+ ..+.|.+. +..++|+|++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~ 195 (373)
T cd06453 117 KVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDG-AQSAGHMPVDVQDLGCDFL 195 (373)
T ss_pred EEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEh-hhhcCceeeeccccCCCEE
Confidence 88754 35665 7778999999987 689999999999999999999999953 34455442 3357899999
Q ss_pred EecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHH
Q 001990 353 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (985)
Q Consensus 353 v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~a 431 (985)
++++ |+++ +|++|++++++++++.+.+...|+.... . ..+.. ........+++.+|+|++ .++++.+
T Consensus 196 ~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~-~-~~~~~-~~~~~~~~~~~~~t~~~~---~~~al~~ 263 (373)
T cd06453 196 AFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIE-E-VSFEE-TTYADLPHKFEAGTPNIA---GAIGLGA 263 (373)
T ss_pred EeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccc-c-ccccc-cccCCCccccCCCCCCHH---HHHHHHH
Confidence 9998 6554 2567999999999988876655532110 0 00000 001223445566788873 4556666
Q ss_pred HHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--CcceEEEecCC--HHHHHHHHHHcCceeeee-----
Q 001990 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD--AHAIASAAYKIEMNLRVV----- 502 (985)
Q Consensus 432 a~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~----- 502 (985)
++ .++..+|++++.++..++++++++.|+++++++++.++ ....+.|..++ +.++.++|.++||.++..
T Consensus 264 al--~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~ 341 (373)
T cd06453 264 AI--DYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQ 341 (373)
T ss_pred HH--HHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchh
Confidence 55 66777899999999999999999999998558887422 23456666664 789999999999987421
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001990 503 -------DSNTVTASFDETTTLEDVDKLFIVF 527 (985)
Q Consensus 503 -------~~~~lris~~~~~t~edid~ll~~l 527 (985)
.++.+|+|++.++|++|+|+|+++|
T Consensus 342 ~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 342 PLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1478999999999999999999875
No 49
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.92 E-value=4.1e-23 Score=226.37 Aligned_cols=373 Identities=15% Similarity=0.184 Sum_probs=269.4
Q ss_pred CCCccccccCCHHHHHHHHHHHhcCccCcCcccccccceecccCccc--cccccccccccccCCCCcchhhhcHHHHHHH
Q 001990 559 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT--EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (985)
Q Consensus 559 ~~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~--~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~e 636 (985)
-++| .+|++.+++++.+++....|-.+..+ +-|+.++..... +........ ++|..+ +.+++..++..+
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~---~vS~~v~~~~~~~~~l~~~~~~k---~N~l~~-d~fp~~~~~e~~ 124 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLG---LASGVVYWGEPELDKLIMEAYNK---FNPLHP-DEFPVVRKLEAE 124 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccC---eeeEEEecCCcchhhHHHHHHhh---cCccCc-cccchhHHHHHH
Confidence 3688 58999999999999887776433222 224444444222 221112222 478887 999999999999
Q ss_pred HHHHHHHHhCCCccce--ecChHHHHHHHHHHHHHHHHHh----cCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC
Q 001990 637 LGEWLCTITGFDSFSL--QPNAGAAGEYAGLMVIRAYHKA----RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (985)
Q Consensus 637 l~~~la~l~G~~~~~~--~~~sGa~g~~a~l~air~~~~~----~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~ 710 (985)
+..++|.+++.+...+ .+.+|+ ++++++.+.|... +|. .++.++++.+.|..+.++++..+++++.||++
T Consensus 125 ~Vnm~~~L~~~~~~~~g~~t~G~S---es~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~ 200 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSCGCGTVGGS---ESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVELREVPLD 200 (491)
T ss_pred HHHHHHHHhcCCccccCccccccc---hHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEEEeeecc
Confidence 9999999999886532 222333 4667777766532 343 35678999999988899999999999999998
Q ss_pred -CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHH-cCCEEEEEccccccccCCCCC-C-----c
Q 001990 711 -AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSP-G-----Y 781 (985)
Q Consensus 711 -~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~-~g~lliVD~a~~~~~~g~~~~-g-----~ 781 (985)
.+.++|+..+.+.++ ++|++|+.+.|+ ++|.++ |+++|.++.-+ +++++|||++ .|+|..| + .
T Consensus 201 ~~~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e-~ve~l~~l~~e~w~ipiHvDa~----~GgFi~p~~~~~~~~ 272 (491)
T KOG1383|consen 201 EGDYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIE-DVEKLADLLLEIWDIPIHVDAC----LGGFINPAGYLNEEE 272 (491)
T ss_pred ccceEecHHHHHHHhc---cceEEEEEEcCCCCccchh-hHHHHHHHHHHHhCCceeeccc----CccccccccccCccc
Confidence 568999999999998 899999999998 599999 99999999999 9999999975 4566554 2 2
Q ss_pred C-----CCcEEEeCCcccccccCCCCCCcceeeeecc-cccC-cCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHH
Q 001990 782 I-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 782 ~-----g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~-~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
| ++-.+..++||. |+..+|.+.+.-+. ++.+ ++-- ...|. +..++++++..+..|. ..+
T Consensus 273 fdFr~p~V~Sisa~~HKY-----Gl~~~G~~~vl~r~k~~~~~q~~~-~~~w~------Gg~y~s~TlngSR~g~--~va 338 (491)
T KOG1383|consen 273 FDFRVPGVTSISADGHKY-----GLAPAGSSWVLYRNKELLPHQLFF-HTDWL------GGIYASPTLNGSRPGS--QVA 338 (491)
T ss_pred cccCCCCceeEeecccee-----eeeecCcEEEEEcccccccceEEE-ecccc------CccccCcccccCCccc--HHH
Confidence 2 345678889995 34445777776663 3322 1100 00011 1234555665555443 456
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 855 ~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
++|+.|..+|.+|+++.++++++++++|++++++.-.+...|. |.. .++.+. ....+..++.+.|.++||++
T Consensus 339 ~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~v--s~~~~~----s~~~~i~elsd~l~~~GW~l 410 (491)
T KOG1383|consen 339 AQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLV--SFILFG----SNDVNIFELSDLLRKKGWIL 410 (491)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcE--EEEEcc----CCccchhhhhHHHHhcCcCc
Confidence 7899999999999999999999999999999998433333332 222 222232 12578899999999999999
Q ss_pred CCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 935 PTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 935 ~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
+..++| .++++|++..++.+++. ++|+..++++++++..+
T Consensus 411 nalq~P--~a~Hi~vt~~~~~~~~A--~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 411 NALQFP--AAIHICVTRVHAREDVA--DRFVADIRKVVEELKSL 450 (491)
T ss_pred cccCCC--CceEEEEEeeeccHHHH--HHHHHHHHHHHHHHHhC
Confidence 988776 58999999999999864 49999999999998753
No 50
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.92 E-value=4.1e-23 Score=240.12 Aligned_cols=314 Identities=17% Similarity=0.162 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHHhCCC-ccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcE
Q 001990 630 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~-~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~ 703 (985)
..+.++++++.+++++|.+ ... ++.++++++...++.++. .. ...++++||+++..|.++.. .++..|++
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~---~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWG---DS-NLKAGDEIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhh---hh-cCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence 3456788999999999997 333 444555554422222221 10 11367899999988876432 24578999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC
Q 001990 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (985)
Q Consensus 704 v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~ 782 (985)
++.++++++|.+|+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|++|..+...+ ....+
T Consensus 136 ~~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~g~~~~-~~~~~ 210 (403)
T TIGR01979 136 LKFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVN-PVEEIAKLAHQVGAKVLVDGAQAVPHMPV-DVQAL 210 (403)
T ss_pred EEEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccC-CHHHHHHHHHHcCCEEEEEchhhcCcccc-Ccccc
Confidence 9999998889999999999997 78999999998 5799998 89999999999999999999997554332 33467
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC-CCC----------CCCCCCCCCCcccccchhhh
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GIP----------APEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~-~~~----------~~~~~~~t~~i~s~~~g~~~ 851 (985)
++|++++++||+| |++|+|++++++++.+.++....|+.. +.. .++.+.+|+++.
T Consensus 211 ~~d~~~~s~~K~~------gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~-------- 276 (403)
T TIGR01979 211 DCDFYVFSGHKMY------GPTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIA-------- 276 (403)
T ss_pred CCCEEEEeccccc------CCCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHH--------
Confidence 8999999999976 334789999998877666533222210 000 001112222221
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e 929 (985)
.+.+..+.++.+...|+.+..++..++++++.++|++ ++++..+.......+.+.+.++ +.+..++.+.|.+
T Consensus 277 ~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~ 350 (403)
T TIGR01979 277 GVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE------GVHPHDVGTILDE 350 (403)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC------CcCHHHHHHHHhh
Confidence 1222334455554556667777888889999999976 3333221111111233455554 4567889999999
Q ss_pred CCCccCCC---C------CCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 930 YGFHGPTM---S------WPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 930 ~Gi~~~~~---~------~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+||.+... . +..++.+|||++.++|++|++ +|+++|+++++.+
T Consensus 351 ~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~---~l~~~l~~~~~~~ 402 (403)
T TIGR01979 351 EGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDID---ALVEALKKVRKFF 402 (403)
T ss_pred CCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHH---HHHHHHHHHHHHh
Confidence 99987531 1 112578999999999999999 9999999877653
No 51
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=9.1e-23 Score=234.93 Aligned_cols=302 Identities=15% Similarity=0.164 Sum_probs=223.2
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCc-ceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEE
Q 001990 207 QGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~-~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~ 285 (985)
++..+.+.++++.+++++|++.. ++.+++|+|.++..++.++ +. +||+|+++...|+++..++...++..|++++.
T Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 40 LRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-LK--EGDHVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-cC--CCCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 34557788899999999999754 7878889998877766653 23 78999999999999998887777777988887
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001990 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (985)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~ 354 (985)
++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|++++|| ..+++|.+. ...++|+|++++
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD-~a~~~g~~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD-AAQTAGVIPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE-hhhccCccCCCchhcCCCEEEe
Confidence 753 34555 7788999999987 67999999999999999999999994 345666553 335689999999
Q ss_pred cC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001990 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (985)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~ 433 (985)
++ |++++| +|.|+++++++. .+.+...|+.. .+.+.+.. .+....|.+.+|.|+ ..+.++.+++
T Consensus 196 s~~K~l~~p-----~g~g~l~~~~~~--~~~~~~~~~~~----~~~~~~~~-~~~~~~r~~~~t~~~---~~~~a~~~al 260 (376)
T TIGR01977 196 TGHKGLLGP-----QGTGGLYIREGI--KLKPLKSGGTG----SHSALIDQ-PSELPDRFESGTLNT---PGIAGLNAGI 260 (376)
T ss_pred cccccccCC-----CCceEEEEcCCc--CcCceecCCCc----cccccccc-cccchhhccCCCCCH---HHHHHHHHHH
Confidence 99 666554 356788888764 12222222210 01111111 111122456788776 4556666665
Q ss_pred HHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--C--CcceEEEecCC--HHHHHHHHHHc-Cceeee-----
Q 001990 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P--FFDTVKVKCAD--AHAIASAAYKI-EMNLRV----- 501 (985)
Q Consensus 434 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~--~~~~~~i~~~~--~~~l~~~L~~~-Gi~~~~----- 501 (985)
.++...|++++.+++.++++++++.|.++++++++.+ + ....+.|..++ ..++.+.|.++ ||.++.
T Consensus 261 --~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~ 338 (376)
T TIGR01977 261 --KFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCA 338 (376)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccc
Confidence 6777789999999999999999999998755888742 1 23346666665 78899999987 887643
Q ss_pred ---------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 502 ---------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 ---------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
...+.+|++++.++|++|+++++++|+.
T Consensus 339 ~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred hHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 1347899999999999999999999963
No 52
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=1.1e-22 Score=234.63 Aligned_cols=310 Identities=14% Similarity=0.161 Sum_probs=210.7
Q ss_pred cHHHHHHHHHHHHHHHhCCCccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH---HHhcCcEE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKI 704 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~---~~~~G~~v 704 (985)
-..+.++++++++++++|.+... ++.++|++|+..++.++..+ ..++++||++...|.++... ++..|+++
T Consensus 39 ~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~-----~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v 113 (379)
T TIGR03402 39 EVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA-----QPEKRHIITTAVEHPAVLSLCQHLEKQGYKV 113 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh-----cCCCCeEEEcccccHHHHHHHHHHHHcCCEE
Confidence 34567889999999999987643 45556666654444433211 12457888888877665433 33479999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.+|.+++|.+|+++++++++ +++++|+++++ |.+|.+. |+++|+++||++|+++++|++|..+...+ +..+++
T Consensus 114 ~~v~~~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~~~~~g~~~~-~~~~~~ 188 (379)
T TIGR03402 114 TYLPVDEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIF-PIEEIGEIAKERGALFHTDAVQAVGKIPI-DLKEMN 188 (379)
T ss_pred EEEccCCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecc-cHHHHHHHHHHcCCEEEEECccccccccc-CcccCC
Confidence 999998889999999999997 78999999987 5799998 89999999999999999999997654433 345689
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHh
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~l 863 (985)
+|++++++||++ |.+|+|++++++... +.+...|+.. ....+.+|.++.+ . ..+.++ ++.+
T Consensus 189 ~D~~~~s~~K~~------gp~G~g~l~v~~~~~--~~p~~~g~~~---~~~~~~gt~~~~~----~-~~l~~a---l~~~ 249 (379)
T TIGR03402 189 IDMLSLSGHKLH------GPKGVGALYIRKGTR--FRPLLRGGHQ---ERGRRAGTENVPG----I-VGLGKA---AELA 249 (379)
T ss_pred CCEEEEcHHHcC------CCCceEEEEECCCCC--CCCcccCCcc---CCCcCCCCccHHH----H-HHHHHH---HHHH
Confidence 999999999943 345799999987642 2222222211 0112334544432 1 112222 2222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCC-ceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC---CC
Q 001990 864 GSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MS 938 (985)
Q Consensus 864 g~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~-~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~---~~ 938 (985)
.+.+.+..++...++++++++|++ ...+...++.. .....+.+.+. +.+..++...|.++||.+.. +.
T Consensus 250 -~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~ 322 (379)
T TIGR03402 250 -TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE------YIEGEAILLLLDMEGICASSGSACT 322 (379)
T ss_pred -HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec------CCCHHHHHHhhccCCEEEEchhhcC
Confidence 234555556777888899988874 33443333211 11123334443 46788999999999998742 11
Q ss_pred CC-----------------CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 939 WP-----------------VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 939 ~p-----------------v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.+ .++.+|+|++.++|++||| +++++|+++++++..
T Consensus 323 ~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~---~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 323 SGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDID---YVLEVLPPIIARLRA 375 (379)
T ss_pred CCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHH---HHHHHHHHHHHHHHh
Confidence 11 1378999999999999999 999999998877553
No 53
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=5.4e-23 Score=238.63 Aligned_cols=311 Identities=16% Similarity=0.158 Sum_probs=209.4
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCccce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcC
Q 001990 627 AQGYQEMFNNLGEWLCTITGFDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCG 701 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~~~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G 701 (985)
..+..+.++++++.+++++|.+...+ +.++++++...+..++.. . .+++++||+++..|.++.. .++..|
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~----~-~~~gd~vl~~~~~~~s~~~~~~~~~~~~g 129 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISR----R-WGPGDEVIVTRLDHEANISPWLQAAERAG 129 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHh----c-CCCCCEEEEcCCchHhHHHHHHHHHHhcC
Confidence 35666788899999999999876443 344444443222222211 0 1467899999888866532 246689
Q ss_pred cEEEEEeCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC
Q 001990 702 MKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (985)
Q Consensus 702 ~~v~~v~~~~-~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~ 779 (985)
++++.++.++ ++.+|+++++++++ +++++|++++| |++|.+. |+++|+++||++|+++++|++|+.+...+ ..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~ 204 (397)
T TIGR01976 130 AKVKWARVDEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIV-DLAAITELVHAAGALVVVDAVHYAPHGLI-DV 204 (397)
T ss_pred CEEEEEeccccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccC-CHHHHHHHHHHcCCEEEEehhhhccccCC-CH
Confidence 9999999876 68899999999997 78999999998 5799998 89999999999999999999996543322 34
Q ss_pred CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHH
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
.++++|++++++|||| ||++|++++++++.+.+......+.......+.+.||+++. ....+.+|..+
T Consensus 205 ~~~~~d~~~~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~-----~~~~l~~al~~ 272 (397)
T TIGR01976 205 QATGADFLTCSAYKFF-------GPHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYE-----LLAGVVAAVDY 272 (397)
T ss_pred HHcCCCEEEEechhhc-------CCceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHH-----HHHHHHHHHHH
Confidence 5678999999999997 35689999998776655432211110000011233444432 22233444555
Q ss_pred HHHhchh-----------hHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHH
Q 001990 860 IAMMGSK-----------GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (985)
Q Consensus 860 l~~lg~~-----------gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~ 926 (985)
+..+|.+ ++.+..++..+++++++++|++. +++..+.+.....+.+.+.+. +.+..++.++
T Consensus 273 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~ 346 (397)
T TIGR01976 273 LAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH------GLPPQRVVRR 346 (397)
T ss_pred HHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC------CcCHHHHHHH
Confidence 5555421 24555667778889999998872 333221001112333444443 4567889999
Q ss_pred HHHCCCccCCCC-C----------C-CCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 927 LMDYGFHGPTMS-W----------P-VPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 927 L~e~Gi~~~~~~-~----------p-v~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
|.++||.+.... + + ..+.+|||++.++|++|+| +|+++|
T Consensus 347 L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~---~l~~~l 397 (397)
T TIGR01976 347 LADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVD---RLLEAL 397 (397)
T ss_pred HHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHH---HHHHhC
Confidence 999999986431 1 1 1368999999999999999 998864
No 54
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=4.2e-23 Score=236.64 Aligned_cols=295 Identities=12% Similarity=0.131 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHhCCCccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH---HHhcCcEEE
Q 001990 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~---~~~~G~~v~ 705 (985)
..+.++++++.+++++|.+... ++.++|++++..++.++.... ..++++||++...|+++... ++..|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~----~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 41 SEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFY----KDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhc----cCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 4567889999999999987643 445556665534443332211 13568899998888765443 235799999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCC
Q 001990 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (985)
Q Consensus 706 ~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~ 784 (985)
.+++++++.+|+++++++++ +++++|+++++ |.+|.+. |+++|+++||++|++++||++|..+...+ +..++|+
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~-~l~~I~~~~~~~g~~~~vD~a~~~g~~~~-~~~~~~~ 191 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQ-PVEEIGELCREKKVLFHTDAAQAVGKIPV-DVDDLGV 191 (364)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceecc-cHHHHHHHHHHcCCEEEEEcchhhCCccc-CcccCCC
Confidence 99998889999999999997 78999999987 5799998 89999999999999999999997665544 4567899
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
|++++++|||+ |++|+|+++++++....+.+...|+.. ..+++.+|+++.+ ...+.+| +..+.
T Consensus 192 D~~~~s~hK~~------gp~G~g~l~v~~~~~~~l~p~~~g~~~---~~~~~~GT~~~~~-----~~~l~~a---l~~~~ 254 (364)
T PLN02651 192 DLMSISGHKIY------GPKGVGALYVRRRPRVRLEPLMSGGGQ---ERGRRSGTENTPL-----VVGLGAA---CELAM 254 (364)
T ss_pred CEEEechhhhC------CCCceEEEEEcCCCCCCCCccccCCCc---cCCccCCCccHHH-----HHHHHHH---HHHHH
Confidence 99999999974 345899999998877666544444211 1123456666542 1222333 33332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCC---CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC---C
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVN---GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---M 937 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~---~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~---~ 937 (985)
. +..+..++...+++++.++|++ ..++...++. ....+.+.+.++ +.+..++.++|.+ |.+.. |
T Consensus 255 ~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~--i~v~~g~~c 325 (364)
T PLN02651 255 K-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA------YVEGESLLMGLKE--VAVSSGSAC 325 (364)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC------CCCHHHHHHHhCC--EEEEchhhc
Confidence 2 3455667788888999998874 2233222321 111223445554 5788899999965 66532 2
Q ss_pred CCC-----------------CCCEEEEeccCCCCHHhhc
Q 001990 938 SWP-----------------VPGTLMIEPTESESKVCHN 959 (985)
Q Consensus 938 ~~p-----------------v~~~lris~t~~~t~eeId 959 (985)
..+ ..+.+|+|++.+||++|||
T Consensus 326 ~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 326 TSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 111 1378999999999999997
No 55
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=1e-22 Score=234.23 Aligned_cols=306 Identities=19% Similarity=0.173 Sum_probs=211.1
Q ss_pred hcHHHHHHHHHHHHHHHhCCC-ccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcC
Q 001990 628 QGYQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCG 701 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~-~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G 701 (985)
+...+.+.++++.+++++|.+ ... ++.++++++...+ ++.+... ..++++||+++..|.++.. .++..|
T Consensus 39 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~---~~~l~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~g 113 (373)
T cd06453 39 ARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLV---AYGLGRA--NKPGDEIVTSVMEHHSNIVPWQQLAERTG 113 (373)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHH---HHHhhhc--CCCCCEEEECcchhHHHHHHHHHHHhhcC
Confidence 345567888999999999988 433 4455555554333 3332211 0156889999887766421 234789
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Q 001990 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (985)
Q Consensus 702 ~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g 780 (985)
++++.++.+.++.+|+++++++++ +++++|++++| |++|.+. |+++|.++|+++|+++++|+++..+...+ ...
T Consensus 114 ~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~ 188 (373)
T cd06453 114 AKLKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAGVPVLVDGAQSAGHMPV-DVQ 188 (373)
T ss_pred cEEEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcC-CHHHHHHHHHHcCCEEEEEhhhhcCceee-ecc
Confidence 999999998889999999999997 68999999998 5799998 89999999999999999999986443322 234
Q ss_pred cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC-CC-----CCC-----CCCCCCCCcccccchh
Q 001990 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-----PAP-----EKSQPLGTIAAAPWGS 849 (985)
Q Consensus 781 ~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~-~~-----~~~-----~~~~~t~~i~s~~~g~ 849 (985)
++++|++++++||+|+ ++|+|++++++++.+.+.....|+.. +. ..+ ..+.+++++
T Consensus 189 ~~~~d~~~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~------- 255 (373)
T cd06453 189 DLGCDFLAFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNI------- 255 (373)
T ss_pred ccCCCEEEeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCH-------
Confidence 6789999999999984 37789999998877665533222110 00 000 011112111
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L 927 (985)
..+.+.++.+..+..+|+.+..++...+++++.+.|++. +++. ..+ ....+.+.+.+. +.+..++.++|
T Consensus 256 -~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~-~~~~~~~~~~~~------~~~~~~i~~~l 326 (373)
T cd06453 256 -AGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVY-GDA-EDRAGVVSFNLE------GIHPHDVATIL 326 (373)
T ss_pred -HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCc-cccCCeEEEEEC------CcCHHHHHHHH
Confidence 122334556677777788877888888899999999873 3333 111 112233455543 45778999999
Q ss_pred HHCCCccCCCCC---------CCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 928 MDYGFHGPTMSW---------PVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 928 ~e~Gi~~~~~~~---------pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
.++||.+..... ..+++||+|++.++|++|+| +|+++|
T Consensus 327 ~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~---~~~~~l 373 (373)
T cd06453 327 DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEID---ALVEAL 373 (373)
T ss_pred HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHH---HHHhhC
Confidence 999998743111 12578999999999999999 998864
No 56
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.92 E-value=4.8e-23 Score=236.82 Aligned_cols=304 Identities=18% Similarity=0.227 Sum_probs=214.6
Q ss_pred hcHHHHHHHHHHHHHHHhCCCc-cc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcC
Q 001990 628 QGYQEMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCG 701 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~-~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G 701 (985)
....+.++++++.+++++|++. .. ++..+++.+...++..+.. . ..++++|++....|.++... ++..|
T Consensus 39 ~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~---~--~~~g~~vl~~~~~~~s~~~~~~~~~~~~g 113 (371)
T PF00266_consen 39 REFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLN---P--LKPGDEVLVTSNEHPSNRYPWEEIAKRKG 113 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHH---H--GTTTCEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccc---c--cccccccccccccccccccccccccccch
Confidence 3456788899999999999988 44 4455555555444443321 1 13678899988877666522 34689
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Q 001990 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (985)
Q Consensus 702 ~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g 780 (985)
+++++++.+.++.+|+++++++|+ +++++|++++. +.+|+.. |+++|+++||++|++++||++|+.+...+ +..
T Consensus 114 ~~v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~-pi~~I~~~~~~~~~~~~vD~~~~~g~~~i-d~~ 188 (371)
T PF00266_consen 114 AEVRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRN-PIEEIAKLAHEYGALLVVDAAQSAGCVPI-DLD 188 (371)
T ss_dssp EEEEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBS-SHHHHHHHHHHTTSEEEEE-TTTTTTSS---TT
T ss_pred hhhccccccccchhhhhhhhhhhc---cccceEEeecccccccEEe-eeceehhhhhccCCceeEechhccccccc-ccc
Confidence 999999998889999999999998 89999999986 5799998 89999999999999999999998777654 456
Q ss_pred cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccC-CCC----------CCCCCCCCCCCcccccchh
Q 001990 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGI----------PAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 781 ~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~-~~~----------~~~~~~~~t~~i~s~~~g~ 849 (985)
++++|++++++|| |+ |+||+|++++++++...+.+...++. .+. ..+..+.||.++..
T Consensus 189 ~~~~D~~~~s~~K-l~-----gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~----- 257 (371)
T PF00266_consen 189 ELGADFLVFSSHK-LG-----GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPA----- 257 (371)
T ss_dssp TTTESEEEEESTS-TT-----SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHH-----
T ss_pred ccccceeeecccc-cC-----CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeeh-----
Confidence 7899999999999 74 55789999999876655533332221 000 01112334544331
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCC--CCceeEEEEEEecCccccCCCCHHHHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~--~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L 927 (985)
+.+...++..+...|+.++.++..++++++.+.|++...+...++ .......+.+.++ +.+..++.+.|
T Consensus 258 ---~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L 328 (371)
T PF00266_consen 258 ---IYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP------GSDADDVVKYL 328 (371)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET------TSSHHHHHHHH
T ss_pred ---hhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec------CCCHHHHHHHH
Confidence 112234455665677888888899999999999988544444332 1112233555554 57889999999
Q ss_pred HHCCCccCC---CCCC------CCCEEEEeccCCCCHHhhchHHHH
Q 001990 928 MDYGFHGPT---MSWP------VPGTLMIEPTESESKVCHNREDLF 964 (985)
Q Consensus 928 ~e~Gi~~~~---~~~p------v~~~lris~t~~~t~eeId~~~~~ 964 (985)
.++||.+.. +..| ..+.+|+|++.++|++||| +|
T Consensus 329 ~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~---~l 371 (371)
T PF00266_consen 329 EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD---RL 371 (371)
T ss_dssp HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH---HH
T ss_pred hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh---hC
Confidence 999998753 1111 2489999999999999999 65
No 57
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=2.7e-22 Score=230.48 Aligned_cols=346 Identities=15% Similarity=0.180 Sum_probs=237.1
Q ss_pred CCHHHHHHHHHHHHcCCCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCC
Q 001990 148 LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP 227 (985)
Q Consensus 148 ~se~e~~~~~~~~~~~n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~ 227 (985)
.+|.|++++|+++++++..+..|+|..+.+ ..|.++ +.+.+ ++.. .+..+...+++.+.+.++++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~a~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYERILSSMCTE-PHPIAR-KAHEM---FLET-NLGDPGLFPGTAKLEEEAVEMLGELLHLP 75 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHHHeeeeeecC-chHHHH-HHHHH---HHhc-CCCCcccCccHHHHHHHHHHHHHHHhCCC
Confidence 689999999999999998877788887643 334443 23322 1111 11222223567788889999999999998
Q ss_pred CcceeeccchHHHHHHHHHHhh-hhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCC
Q 001990 228 MSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (985)
Q Consensus 228 ~~~~sl~~~~ta~~ea~~~a~~-~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~ 297 (985)
..++.+++++|.+..+++.+.+ ...+++++|++++..|+++.+.++ ..|++++.++. +++++ ++++
T Consensus 76 ~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 151 (371)
T PRK13520 76 DAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD----MLGVELRRAPLDDDYRVDVKAVEDLIDDN 151 (371)
T ss_pred CCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH----HcCceEEEecCCCCCcCCHHHHHHHHhhC
Confidence 7778888999887776654432 111256899999999999777653 45778777653 45666 7777
Q ss_pred EeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC---CC-----CCcccceEEEecCccccccCCCCCC
Q 001990 298 VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KP-----PGELGADIVVGSAQRFGVPMGYGGP 368 (985)
Q Consensus 298 t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l---~~-----p~~~GaDi~v~s~k~lg~P~~~GGP 368 (985)
+++|++.++ |.+|.+.|+++|+++||++|++++||. .++.+.+ .. ...+|+|.+.+++++|+.+ |+|
T Consensus 152 ~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a---~~~ 227 (371)
T PRK13520 152 TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA-AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA---PIP 227 (371)
T ss_pred CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe-cchhHHHHhhcCCCCccccCCCCceEEECCccccCc---cCC
Confidence 887877665 679999999999999999999999953 2232221 11 1246899999998666431 223
Q ss_pred ceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHH
Q 001990 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (985)
Q Consensus 369 ~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~ 448 (985)
..++++.++++.+.+... .+ |... .. + .-..||.+. ....++.+++ ..++.+|++++.+
T Consensus 228 ~G~~~~~~~~~~~~l~~~----------~~-~~~~--~~-~--~~~~gt~~~---~~~~~~~~al--~~l~~~g~~~~~~ 286 (371)
T PRK13520 228 AGGILFRDESYLDALAVD----------TP-YLTS--KK-Q--ATLTGTRSG---AGVAATYAVM--KYLGREGYRKVVE 286 (371)
T ss_pred ceEEEEcCHHHHHhhccc----------Cc-cccC--CC-C--cceEeeccC---hHHHHHHHHH--hhhcHhHHHHHHH
Confidence 344555566676665310 00 1000 00 0 001234333 2333444443 6778889999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCCHHHHHHHHHHcCceeeeec-CCeEEEEeccCCCHHHHHHHHHHH
Q 001990 449 RVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVF 527 (985)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~L~~~Gi~~~~~~-~~~lris~~~~~t~edid~ll~~l 527 (985)
++.+++++++++|+++| ++++..+..+.+.+..+.+.++.++|.++||.++... +..+|+|++.++|++|+++++++|
T Consensus 287 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l 365 (371)
T PRK13520 287 RCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDL 365 (371)
T ss_pred HHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHH
Confidence 99999999999999986 8844333344566666668899999999999886643 568999999999999999999999
Q ss_pred hC
Q 001990 528 AG 529 (985)
Q Consensus 528 ~~ 529 (985)
+.
T Consensus 366 ~~ 367 (371)
T PRK13520 366 KE 367 (371)
T ss_pred HH
Confidence 63
No 58
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.91 E-value=8.1e-23 Score=236.54 Aligned_cols=343 Identities=20% Similarity=0.219 Sum_probs=237.3
Q ss_pred CCccccccCCHHHHHHHHHHHhcCccCcCcc-c--ccccceecccCcc-ccccccccccccccCCCCcchhhhcHHHHHH
Q 001990 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHS-M--IPLGSCTMKLNAT-TEMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (985)
Q Consensus 560 ~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~-~--~~lGs~~~~~~~~-~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~ 635 (985)
..| +.+..+++++.++..+..+|..+..+ . +..+.|.+...+. .+.. ..+.+-+...+ +.++++..+..
T Consensus 32 ~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~----~~~~~~nl~d~-~~~p~a~~~E~ 104 (460)
T COG0076 32 MAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL----VSALNKNLGDP-DESPAAAELEE 104 (460)
T ss_pred cCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH----HHHHhhcCCCc-ccChhHHHHHH
Confidence 345 57899999999999997787554332 1 1223443322221 1211 12223344444 66789999999
Q ss_pred HHHHHHHHHhCCCc--cceecChHHHHHHHHHHHHHHHHHh-c---CC--CCCCEEEEcCCCCCCcHHHHHhcCcEEEEE
Q 001990 636 NLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKA-R---GD--HHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (985)
Q Consensus 636 el~~~la~l~G~~~--~~~~~~sGa~g~~a~l~air~~~~~-~---g~--~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v 707 (985)
++..|+++++|.+. ...++.+|+++++.+++++|..... + +. .+.++||+|..+|.++.+++.+.|++++.+
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v 184 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRV 184 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeE
Confidence 99999999999954 3467778888887777777765431 1 10 123479999999999999999999999999
Q ss_pred eCCC-CCCCCHHHHHHHHHhcCCCeEE--EEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC-Cc-
Q 001990 708 GTDA-KGNINIEELRKAAEANRDNLST--LMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GY- 781 (985)
Q Consensus 708 ~~~~-~g~iDle~L~~~i~~~~~~t~~--Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~-g~- 781 (985)
+.++ +.++|+++|+++|+ +++.. |+.+.++ ++|.++ ||++|+++|+++|+|+|||+|..-....+..+ +.
T Consensus 185 ~~~~~~~~id~~~l~~~i~---~~t~~g~vV~~aGtT~~G~iD-di~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 185 PTVPTDYRIDVDALEEAID---ENTIGGVVVGTAGTTDTGSID-DIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred EeccCccccCHHHHHHHHH---hhccCceEEEEecCCCCCccC-CHHHHHHHHHHcCCcEEEEccccceeecccCccchh
Confidence 9987 79999999999999 56665 7777776 599999 99999999999999999999864333323222 22
Q ss_pred ----CCCcEEEeCCcccccccCCCCCCcceeeeeccc--ccCcCC--CCccccCCCCCCCCCCCCCCCcccccchhhhHH
Q 001990 782 ----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLP--SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 782 ----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~--l~~~lp--g~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
.++|.++.|+||++..|. +.|++++++. +.+.+. ..+.+.+ ......+.+++.| ..+
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~-----~~G~il~rd~e~l~~~~~~~~~yl~~~--------~~~~~ti~~sr~~--~~~ 325 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPI-----GCGVVLFRDEEALRRILIFADYYLPGG--------GIPNFTILGSRPG--RQA 325 (460)
T ss_pred hcCCCCceEEEECcccccCCCC-----CceEEEEECHHHhhhhhhcccccCCCC--------CcCceeEeeccch--HHH
Confidence 368999999999987664 5667888854 332221 1111100 0011112222222 246
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-c-CCeeEcCCCCceeEEEEEEecCccccCCCC-HHHHHHHHHHC
Q 001990 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGIE-PEDVAKRLMDY 930 (985)
Q Consensus 854 ~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~-~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~-~~~l~~~L~e~ 930 (985)
+++|+.+..+|.+|++++.++.++++++++++|++ + ++++.. +..+.+++..++ ..+ ..+..+++...
T Consensus 326 ~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~----p~l~~V~fr~~~-----~~~~~~~~~~~~~~~ 396 (460)
T COG0076 326 LALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNE----PELPIVAFRLKD-----DEDTLADLSERLDRR 396 (460)
T ss_pred HHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecC----CccceEEEEcCC-----cccchhchHHHHHhc
Confidence 67899999999999999999999999999999998 3 776542 345556666531 112 55677778889
Q ss_pred CCccCCC
Q 001990 931 GFHGPTM 937 (985)
Q Consensus 931 Gi~~~~~ 937 (985)
||.++..
T Consensus 397 gw~v~~~ 403 (460)
T COG0076 397 GWQVPAQ 403 (460)
T ss_pred Cceeecc
Confidence 9998653
No 59
>PLN02880 tyrosine decarboxylase
Probab=99.91 E-value=2.9e-22 Score=235.83 Aligned_cols=386 Identities=13% Similarity=0.055 Sum_probs=246.1
Q ss_pred cccCCHHHHHHHHHHHhcCccCcCccccccccee--c-ccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHH
Q 001990 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCT--M-KLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (985)
Q Consensus 565 ~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~--~-~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~l 641 (985)
+++.+.+++++.+.+.-.......+...++|+-+ . +.....++....+.. +...| +.+++..++..++.+|+
T Consensus 57 ~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~--~~~~~---~~sp~~~~lE~~vi~wl 131 (490)
T PLN02880 57 NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNI--VGFSW---ITSPAATELEMIVLDWL 131 (490)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhcc--CCccc---ccCcccHHHHHHHHHHH
Confidence 4667888999999875444433234456676421 1 111112222211100 01122 44677888999999999
Q ss_pred HHHhCCCcc--------ceecChHHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCCcHHHHHhcCc---EEEEE
Q 001990 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGM---KIVSV 707 (985)
Q Consensus 642 a~l~G~~~~--------~~~~~sGa~g~~a~l~air~~~~-~~g~~--~~~~Vlv~~~~Hg~~~~~~~~~G~---~v~~v 707 (985)
++++|++.. .++.++|+++++.++.++|.+.. ..|.. ++-.|++++.+|.+..+++...|+ .++.|
T Consensus 132 ~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 132 AKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL 211 (490)
T ss_pred HHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe
Confidence 999999863 35667788888888888876432 22221 233566788899999999999998 48889
Q ss_pred eCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCC----
Q 001990 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT---- 777 (985)
Q Consensus 708 ~~~~--~g~iDle~L~~~i~~~---~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~---- 777 (985)
|+|. ++++|+++|+++|++. +..+.+|+.+..+ .+|.++ |+++|+++|+++|+|+|||+|+..+.....
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD-pl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~ 290 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD-PLLELGKIAKSNGMWFHVDAAYAGSACICPEYRH 290 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC-cHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH
Confidence 9975 5799999999999742 1235667777775 489999 899999999999999999999853322110
Q ss_pred -CCCcCCCcEEEeCCcccccccCCCCCCcceeeeeccc--ccCcCC---CCccccCCCC-CCCCCCCCCCCcccccchhh
Q 001990 778 -SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLP---SHPVVSTGGI-PAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 778 -~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~--l~~~lp---g~~~g~~~~~-~~~~~~~~t~~i~s~~~g~~ 850 (985)
..+-.++|.++.++|||++.|++ .|++++++. +.+.+. +++.....+. ..+.....+ +. .|..
T Consensus 291 ~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~--i~---~~rr 360 (490)
T PLN02880 291 YIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQ--IP---LGRR 360 (490)
T ss_pred HhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccC--cC---CCCc
Confidence 12335789999999999987755 568888742 211110 0000000000 000000000 10 1122
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCCH-------H
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEP-------E 921 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~-------~ 921 (985)
..+...|..++.+|.+|+.+..++.+++++++.+.|++ +++++.+ +..+.++|.+.+. +.+. .
T Consensus 361 ~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~----~~~~iv~Fr~~~~----~~~~~~~~~~n~ 432 (490)
T PLN02880 361 FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP----RIFSLVCFRLVPP----KNNEDNGNKLNH 432 (490)
T ss_pred ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC----CceEEEEEEEeCC----CCChhhHHHHHH
Confidence 33467799999999999999999999999999999986 4555432 2355566766421 1111 3
Q ss_pred HHHHHHHHCCCc-cCCCCCCCCCEEEEeccCCCC-HHhhchHHHHHHHHHHHHHHHHH
Q 001990 922 DVAKRLMDYGFH-GPTMSWPVPGTLMIEPTESES-KVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 922 ~l~~~L~e~Gi~-~~~~~~pv~~~lris~t~~~t-~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
++.++|.+.|.. +....+.-...+|+|+...+| ++|+| .+++.|.++.+++..
T Consensus 433 ~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~---~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 433 DLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVT---AAWKVLQDEASKLLG 487 (490)
T ss_pred HHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHH---HHHHHHHHHHHHHHH
Confidence 456666665544 332222223579999876655 69999 999999998877654
No 60
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=2e-22 Score=230.35 Aligned_cols=313 Identities=14% Similarity=0.126 Sum_probs=211.7
Q ss_pred cHHHHHHHHHHHHHHHhCCCcc--ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCc--HHHHHhcCcEE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKI 704 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~--~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~--~~~~~~~G~~v 704 (985)
+..+..+++++.+++++|.+.. .+++++|++++..+ ++.+. .++++||++...|..+ ...++..|+++
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~---~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~g~~~ 100 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAA---LSNLL-----EPGDKVLVGVNGVFGDRWADMAERYGADV 100 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHH---HHHhC-----CCCCEEEEecCCchhHHHHHHHHHhCCCe
Confidence 3456788999999999999542 35566666655333 33321 3678899887666543 23466789999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.+|.++++.+|++++++.+++ .++++|++++| |.+|.+. |+++|+++|+++|+++++|++|..+...+ ....++
T Consensus 101 ~~v~~~~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~~~li~D~~~~~g~~~~-~~~~~~ 176 (356)
T cd06451 101 DVVEKPWGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLN-PLEGIGALAKKHDALLIVDAVSSLGGEPF-RMDEWG 176 (356)
T ss_pred EEeecCCCCCCCHHHHHHHHhc--cCCCEEEEeccCCCccccc-CHHHHHHHHHhcCCEEEEeeehhccCccc-cccccC
Confidence 9999987789999999999972 27889999988 5699998 89999999999999999999986443222 345678
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCC--CccccCCCC----CCCCCCCCCCCcccccchhhhHHHHHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGI----PAPEKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg--~~~g~~~~~----~~~~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
+|++++++||||+.| +|+|++++++++.+.+.. ...++..+. ..+.....+.... +.....++.
T Consensus 177 ~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-----~~~~~~a~~ 246 (356)
T cd06451 177 VDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTP-----PVNLLYALR 246 (356)
T ss_pred ccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCC-----hHHHHHHHH
Confidence 999999999999532 478999999876654421 111110000 0000000111111 111222334
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC-CCccC
Q 001990 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGP 935 (985)
Q Consensus 858 a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~-Gi~~~ 935 (985)
+.+..+..+|+.+..++..++++++.+.|++ ++++..+ +.......+.+.++ .+.+..++++.|.++ ||.+.
T Consensus 247 aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~gI~~~ 320 (356)
T cd06451 247 EALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAK-PELRSPTVTAVLVP-----EGVDGDEVVRRLMKRYNIEIA 320 (356)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccC-cccCCCceEEEECC-----CCCCHHHHHHHHHHhCCEEEe
Confidence 5566666677877888888999999999987 5555322 11111111223332 245788999999998 99875
Q ss_pred CCCCC-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 936 TMSWP-VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 936 ~~~~p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
....+ .++++|++++..+|+||++ +|+++|++++
T Consensus 321 ~g~~~~~~~~iRis~~~~~~~e~v~---~~~~~l~~~~ 355 (356)
T cd06451 321 GGLGPTAGKVFRIGHMGEATREDVL---GVLSALEEAL 355 (356)
T ss_pred cccccccCCEEEEecCCCCCHHHHH---HHHHHHHHHh
Confidence 33222 3579999999999999999 9999998865
No 61
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=5.5e-22 Score=220.61 Aligned_cols=325 Identities=18% Similarity=0.232 Sum_probs=239.8
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCc-ceeeccchHHHHHHHHHHh
Q 001990 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCN 248 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~-~~sl~~~~ta~~ea~~~a~ 248 (985)
.+..| |.-+|+.|.++ ..++-. +-+.|+. .+.+.+.++.+..+++.+-. -+.+..+||+++||++.++
T Consensus 8 Ll~PG--P~~v~~~V~~a-m~~~~~----~h~s~~F----~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 8 LLTPG--PVPVPPRVLLA-MARPMV----GHRSPDF----VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeCC--CCCCCHHHHHH-hcCCCC----CCCCHHH----HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 45667 55688888744 444432 2233442 35566677788889998743 3445589999999988765
Q ss_pred hhhcCCCCEEEEcC-CCChhHHHHHHHhhcCCCeEEEEeC--------chhhhc-cC--CCEeEEEEEcC-CCCeeeccH
Q 001990 249 NIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSD--------LKDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (985)
Q Consensus 249 ~~~~~~g~~Vlv~~-~~h~s~~~~~~~~a~~~gi~v~~~~--------~~~l~~-l~--~~t~~V~v~~p-n~~G~i~dl 315 (985)
- . +||+||+.. +.|.....-+ ++.+|.+++.++ ++++++ ++ ++.++|.++|. +++|.++|+
T Consensus 77 ~-~--pgdkVLv~~nG~FG~R~~~i---a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl 150 (383)
T COG0075 77 V-E--PGDKVLVVVNGKFGERFAEI---AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPL 150 (383)
T ss_pred c-C--CCCeEEEEeCChHHHHHHHH---HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcH
Confidence 2 3 789988555 7886555444 556787777763 356766 54 67888988775 789999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeec
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l-~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d 393 (985)
++|+++++++|++++||+ ..|+|.. ..+.+||+|+++.++ |.|+.| ||+|++.+|++.++.+..+
T Consensus 151 ~~I~~~~k~~g~l~iVDa-VsS~Gg~~~~vd~wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~------- 217 (383)
T COG0075 151 KEIAKAAKEHGALLIVDA-VSSLGGEPLKVDEWGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEER------- 217 (383)
T ss_pred HHHHHHHHHcCCEEEEEe-cccCCCcccchhhcCccEEEecCchhccCC-----CccceeEECHHHHHHHhcC-------
Confidence 999999999999999965 4577765 367899999999999 888877 8899999999988887322
Q ss_pred CCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-
Q 001990 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL- 472 (985)
Q Consensus 394 ~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~- 472 (985)
..++|+|+|....+.......|+.....+.++++..++ ..+..||++++.+|+++++++++++++++| ++++.+
T Consensus 218 --~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al--~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~ 292 (383)
T COG0075 218 --KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREAL--DLILEEGLEARIARHRRLAEALRAGLEALG-LELFADP 292 (383)
T ss_pred --CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCc
Confidence 12359999865544444445667777778899998887 777789999999999999999999999998 998853
Q ss_pred -CCcceE-EEecCC---HHHHHHHHHH-cCceeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 473 -PFFDTV-KVKCAD---AHAIASAAYK-IEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 473 -~~~~~~-~i~~~~---~~~l~~~L~~-~Gi~~~~----~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
...+++ ++..|. ..++...+.+ .|+.+.. +.+..+||..+=.-+.+|+...+.+|+.
T Consensus 293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~ 359 (383)
T COG0075 293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359 (383)
T ss_pred ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHH
Confidence 223444 456664 3445555554 5887743 2357899998888899999999999985
No 62
>PRK02948 cysteine desulfurase; Provisional
Probab=99.91 E-value=8.9e-22 Score=227.19 Aligned_cols=307 Identities=15% Similarity=0.171 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHHHhCCCccceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH---HHhcCcEEE
Q 001990 630 YQEMFNNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~---~~~~G~~v~ 705 (985)
..+.++++++.+++++|.+...+.+ +++++++..++.++. ... ..++++|+++...|.++..+ ++..|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~---~~~-~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~ 116 (381)
T PRK02948 41 ASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLL---NAL-PQNKKHIITTPMEHASIHSYFQSLESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH---Hhc-cCCCCEEEECCcccHHHHHHHHHHHhCCCEEE
Confidence 3467889999999999987655444 444555543333332 111 12467899988888877654 456799999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCC
Q 001990 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (985)
Q Consensus 706 ~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~ 784 (985)
.++.++++.+|+++|+++++ +++++|++++| |.+|.+. |+++|+++|+++|++++||++|..+..++ ...++++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~vivD~~~~~g~~~~-~~~~~~~ 191 (381)
T PRK02948 117 EIPVDKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQ-PIAEIGALLKKYNVLFHSDCVQTFGKLPI-DVFEMGI 191 (381)
T ss_pred EEeeCCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeeh-hHHHHHHHHHHcCCEEEEEChhhcccccc-CcccCCC
Confidence 99998889999999999987 78899999998 4799998 89999999999999999999886554333 3456789
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeeccccc--CcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHH
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA--PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~--~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~ 862 (985)
|+++.++||+| |.+|+|++++++++. +..++ .. + ..+.+.+|.++.+ ..++.+.+..
T Consensus 192 d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~----~~-~--~~~~~~~t~~~~~--------~~a~~~al~~ 250 (381)
T PRK02948 192 DSLSVSAHKIY------GPKGVGAVYINPQVRWKPVFPG----TT-H--EKGFRPGTVNVPG--------IAAFLTAAEN 250 (381)
T ss_pred CEEEecHHhcC------CCCcEEEEEEcCCCCCCCcccC----CC-C--CCCcCCCCccHHH--------HHHHHHHHHH
Confidence 99999999976 345789999987641 11111 00 0 0111223333221 1222233333
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCce-eEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC--
Q 001990 863 MGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTV-AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-- 938 (985)
Q Consensus 863 lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~-~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-- 938 (985)
+. +++.+..++..+++++++++|++ ++++...+..... ...+.+.++ +.+..++...|.++||.+....
T Consensus 251 ~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c 323 (381)
T PRK02948 251 IL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK------GIEGQYTMLECNRRGIAISTGSAC 323 (381)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC------CCCHHHHHHhcccCCEEEEchHhc
Confidence 22 34566677888899999999987 5555433211111 112223332 4567888888989999975311
Q ss_pred -----CC-------------CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 939 -----WP-------------VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 939 -----~p-------------v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.| ..+.+|+|++.++|++|+| +++++|+++++++-
T Consensus 324 ~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~---~l~~~l~~~~~~~~ 376 (381)
T PRK02948 324 QVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQID---TTIHALETIGNQFY 376 (381)
T ss_pred CCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHH---HHHHHHHHHHHHHh
Confidence 11 1368999999999999999 99999999877543
No 63
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.91 E-value=7e-22 Score=229.54 Aligned_cols=308 Identities=13% Similarity=0.145 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHhCCCccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH---HhcCcEEEE
Q 001990 631 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVS 706 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~---~~~G~~v~~ 706 (985)
.+.++++++.+++++|.+... ++.++|++++..++.++..+. ..++++||++..+|.++...+ +..|++++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~----~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~ 121 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFY----KSKGNHIITSKTEHKAVLDTCRYLEREGFEVTY 121 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhh----cCCCCEEEECCCccHHHHHHHHHHHhcCCEEEE
Confidence 356888999999999987643 455566666644444333211 135688999988887665443 456999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCc
Q 001990 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~D 785 (985)
+++++++.+|+++++++++ +++++|+++++ |.+|.+. |+++|+++||++|++++||++|+.+...+ ....+++|
T Consensus 122 v~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~-~~~~I~~l~~~~g~~livD~a~a~g~~~~-~~~~~~~D 196 (402)
T TIGR02006 122 LPPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERKVFFHVDAAQSVGKIPI-NVNELKVD 196 (402)
T ss_pred EccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceecc-cHHHHHHHHHHcCCEEEEEcchhcCCccc-CccccCCC
Confidence 9998889999999999997 78899999998 5799998 89999999999999999999997655443 34467999
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
++++++||++ |.+|+|+++++++....+.....|... .++.+.+|.++.. ...+. ..+..+.
T Consensus 197 ~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~---~~~~~~gt~~~~~-----~~al~---~al~~~~- 258 (402)
T TIGR02006 197 LMSISGHKIY------GPKGIGALYVRRKPRVRLEALIHGGGH---ERGMRSGTLPTHQ-----IVGMG---EAFRIAK- 258 (402)
T ss_pred EEEEehhhhc------CCCceEEEEEccCCCCCCCceecCCCc---cCCccCCCccHHH-----HHHHH---HHHHHHH-
Confidence 9999999965 334799999997654433322222110 1112334444431 11122 2333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCC-CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC---CC---
Q 001990 866 KGLTEASKIAILNANYMAKRLEKHYPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MS--- 938 (985)
Q Consensus 866 ~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~-~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~---~~--- 938 (985)
+++....++...+++++++.|++...+...++. ....+.+++.+. +.+..++...|. |+.+.. +.
T Consensus 259 ~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~------~~~~~~~~~~l~--~i~v~~G~~c~~~~ 330 (402)
T TIGR02006 259 EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN------YVEGESLIMALK--DLAVSSGSACTSAS 330 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe------CcCHHHHHHhcC--CEEEechhhcCCCC
Confidence 356666677788889999998763334332221 111123345554 345667766663 544321 10
Q ss_pred -CC--------C-----CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 939 -WP--------V-----PGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 939 -~p--------v-----~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.| + .+.||+|++.++|++||| +|+++|+++.+.++
T Consensus 331 ~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid---~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 331 LEPSYVLRALGINDELAHSSIRFTIGRFTTEEEID---YAVKLVKSAIDKLR 379 (402)
T ss_pred CCccHHHHHcCCChhhcCceEEEEecCCCCHHHHH---HHHHHHHHHHHHHH
Confidence 01 1 378999999999999999 99999999887764
No 64
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=3.7e-22 Score=229.12 Aligned_cols=302 Identities=16% Similarity=0.149 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHH-----------------------HHhcCCCCCCEEEEcCC
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY-----------------------HKARGDHHRNVCIIPVS 688 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~-----------------------~~~~g~~~~~~Vlv~~~ 688 (985)
++...+.+...++||.+.+++++.||+.++.++++++..- -+-|..-++|+|+..+.
T Consensus 95 ~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l 174 (493)
T PRK13580 95 TVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSL 174 (493)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecC
Confidence 4444456788899999999999999999998888776520 00000012688887666
Q ss_pred CCCCcH-----HHHHhcCcEEEEEeCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCE
Q 001990 689 AHGTNP-----ATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQ 762 (985)
Q Consensus 689 ~Hg~~~-----~~~~~~G~~v~~v~~~~-~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~l 762 (985)
.||-|- ........+++..++++ +|.+|+++++++++ +++..|+++..+.+|... |+++|+++|+++|++
T Consensus 175 ~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~~~-dl~~i~eia~~~gA~ 250 (493)
T PRK13580 175 DSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPRRV-NFAKLREIADEVGAV 250 (493)
T ss_pred CCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---hcCCEEEEeCccccCCCc-CHHHHHHHHHHcCCE
Confidence 666441 11222235677777764 58999999999998 677778887764445555 899999999999999
Q ss_pred EEEEccccccccCCCC-C----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCC---CCccccCCCCCCCC
Q 001990 763 VYMDGANMNAQVGLTS-P----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP---SHPVVSTGGIPAPE 834 (985)
Q Consensus 763 liVD~a~~~~~~g~~~-~----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lp---g~~~g~~~~~~~~~ 834 (985)
++||+||..|+.+... + ...++|++++++|||| +||.+|++++++++.+++. +.++
T Consensus 251 L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL------~GP~GG~I~~~~~l~~~L~~a~P~i~---------- 314 (493)
T PRK13580 251 LMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTL------RGPRGGLVLAKKEYADAVDKGCPLVL---------- 314 (493)
T ss_pred EEEECchhhceeccccchhhcCCCCCCcEEEeCChhhc------cCCCeEEEEecHHHHHHHhhCCCccc----------
Confidence 9999999877754211 1 1237899999999998 4687799999988776652 1111
Q ss_pred CCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCcc
Q 001990 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLK 913 (985)
Q Consensus 835 ~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~ 913 (985)
+++. .+..++.+.+ +..+...++++..++..+++++|++.|.+ |+.+...+ ...|.+.+++.+
T Consensus 315 ---gg~l-------~p~iAA~avA-l~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~-- 378 (493)
T PRK13580 315 ---GGPL-------PHVMAAKAVA-LAEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTS-- 378 (493)
T ss_pred ---CCCc-------cHHHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCC--
Confidence 1111 1122222333 33333334566788999999999999987 88775322 223556677652
Q ss_pred ccCCCCHHHHHHHHHHCCCccCCCCCC-C------CCEEEEeccC----CCCHHhhchHHHHHHHHHHHHHH
Q 001990 914 NTAGIEPEDVAKRLMDYGFHGPTMSWP-V------PGTLMIEPTE----SESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 914 ~~~g~~~~~l~~~L~e~Gi~~~~~~~p-v------~~~lris~t~----~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+.....+.+.|.+.||.++...+| + +..|||+++. .++++||+ ++++.|.++++.
T Consensus 379 --~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~---~iad~l~~~l~~ 445 (493)
T PRK13580 379 --FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMD---EVAELIVKVLSN 445 (493)
T ss_pred --HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHH---HHHHHHHHHHHh
Confidence 1233457778999999998765544 2 4679999988 45699999 999999888764
No 65
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=2.7e-22 Score=228.15 Aligned_cols=292 Identities=18% Similarity=0.198 Sum_probs=206.9
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC-c--cceecChHHHHHHHHHHHHHHHHHh----c--CCCCCCEEEEcCCCCCCcHHHH
Q 001990 627 AQGYQEMFNNLGEWLCTITGFD-S--FSLQPNAGAAGEYAGLMVIRAYHKA----R--GDHHRNVCIIPVSAHGTNPATA 697 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~-~--~~~~~~sGa~g~~a~l~air~~~~~----~--g~~~~~~Vlv~~~~Hg~~~~~~ 697 (985)
+.+..++.+++.+++++++|.+ . ..+++++|++++..++.+++..... . +..+++.|++++.+|.++...+
T Consensus 33 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~ 112 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA 112 (345)
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH
Confidence 5678888999999999999986 2 3467777887776565555432100 0 0112347788888898887777
Q ss_pred HhcCcEEEEEeCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccc
Q 001990 698 AMCGMKIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 698 ~~~G~~v~~v~~~~~g~iDle~L~~~i~~---~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
...|.+++.+|+++++.+|+++|++++++ ...++++|++++|+ .+|.++ |+++|+++|+++|+++|+|++|..+.
T Consensus 113 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~l~vD~a~~~~~ 191 (345)
T cd06450 113 AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID-PLEEIADLAEKYDLWLHVDAAYGGFL 191 (345)
T ss_pred HHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-CHHHHHHHHHHhCCeEEEechhhHHH
Confidence 88899999999988889999999999973 11277888888885 699998 89999999999999999999986444
Q ss_pred cCCCCC-----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 774 VGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 774 ~g~~~~-----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
...... ...++|++++++||+++.| +|+|+++++
T Consensus 192 ~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-----~g~g~~~~~------------------------------------ 230 (345)
T cd06450 192 LPFPEPRHLDFGIERVDSISVDPHKYGLVP-----LGCSAVLVR------------------------------------ 230 (345)
T ss_pred hhChhhHHHhcCccccCEEEEchhHhhCCC-----cchHHHHHH------------------------------------
Confidence 322111 1136899999999998533 356666544
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
+...|+.+..++.+|+.+..++..++++++.+.|++...+...++ +..+.+.+.+.+- ...+.+..++.++|.
T Consensus 231 ----~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~iv~f~~~~~-~~~~~~~~~i~~~L~ 303 (345)
T cd06450 231 ----ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE--PNLSLVCFRLKPS-VKLDELNYDLSDRLN 303 (345)
T ss_pred ----HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEECCc-chhhHHHHHHHHHHH
Confidence 112356677788889999999999999999999987322222221 1233445554310 000245678999999
Q ss_pred HCCC-ccCCCCCCCCCEEEEeccCC-CCHHhhchHHHHHHHHHH
Q 001990 929 DYGF-HGPTMSWPVPGTLMIEPTES-ESKVCHNREDLFFQILLS 970 (985)
Q Consensus 929 e~Gi-~~~~~~~pv~~~lris~t~~-~t~eeId~~~~~i~aL~~ 970 (985)
++|+ +++...++.++.+|++++.. +|++|+| +|+++|++
T Consensus 304 ~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~---~l~~~l~~ 344 (345)
T cd06450 304 ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDAD---ALLEDIER 344 (345)
T ss_pred hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHH---HHHHHHHh
Confidence 9864 44432222357899999986 4999999 99999875
No 66
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=1.1e-21 Score=244.59 Aligned_cols=350 Identities=14% Similarity=0.141 Sum_probs=236.3
Q ss_pred HHHHHHcCCCccceecCCCCCCCCCcHHHHHHHHhCCcccccc--CCChh-hHhhHHHHHHHHHHHHHHHhhCCCCcc--
Q 001990 156 HMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQA-EIAQGRLESLLNFQTMIADLTGLPMSN-- 230 (985)
Q Consensus 156 ~~~~~~~~n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~--~py~~-e~sqg~l~~i~e~q~~ia~L~g~~~~~-- 230 (985)
+|..+ ++..|.++-|.+.+ .|..+.+.+.. |+..+ +|+.. ..++-+.+.+.++++.+|+++|+++.+
T Consensus 28 ~fp~l--~~~iYLD~Aatt~~---~~~~V~~~~~~---~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~ 99 (805)
T PLN02724 28 EFARL--KGVVYLDHAGATLY---SESQLEAALAD---FSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYA 99 (805)
T ss_pred Hhhhc--CCCEeEeCCCCCCC---CHHHHHHHHHH---HHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceE
Confidence 45555 33456666666643 34455432211 22211 34321 245667788999999999999997654
Q ss_pred eeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch------------------hhh
Q 001990 231 ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------------------DID 292 (985)
Q Consensus 231 ~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~------------------~l~ 292 (985)
+.++.|+|.++..+..++.+. +||+||++..+|+++.. |..+++..|+++++++.+ +++
T Consensus 100 VvFtsnaT~alnlva~~l~~~--~gd~Iv~t~~eH~svl~-~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~ 176 (805)
T PLN02724 100 CVFTSGATAALKLVGETFPWS--SESHFCYTLENHNSVLG-IREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQ 176 (805)
T ss_pred EEEeCChHHHHHHHHHHCCCC--CCCeEEEeeccccchHH-HHHHHHHcCCeEEeccchhccccccccccccccchhhhh
Confidence 677888998777665554443 78999999999999885 446667789999887653 122
Q ss_pred c-c----------CCCEeEEEEEc-CCCCeeeccHHHHHHHHHhC-------C-cEEEEE-eccccccCCC-CCCcccce
Q 001990 293 Y-K----------SGDVCGVLVQY-PGTEGEVLDYGDFIKNAHAN-------G-VKVVMA-TDLLALTILK-PPGELGAD 350 (985)
Q Consensus 293 ~-l----------~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~-------g-alliV~-a~~~alg~l~-~p~~~GaD 350 (985)
+ + +++|++|++++ +|.+|.+.|++.|..+++.. | ++++|| ++ ++|.++ +..++|+|
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ--~~g~~piDv~~~~~D 254 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAK--GCGTSPPDLSRYPAD 254 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhh--hcCCCCCChhhcCCC
Confidence 1 1 24568888887 58999999999775555432 3 567784 44 444332 45789999
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeee-eecCC-CCcceEEecccccccccccccCCCccchhHHH
Q 001990 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV-SIDSS-GKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (985)
Q Consensus 351 i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~-s~d~~-g~~~~~l~l~tre~~~rre~atsni~t~~~l~ 427 (985)
++++|+ |++|+|. |+|+|++++++.+.+.+.+.|+ +.... ....|.. ...+.+.|+|.||.|+ .++.
T Consensus 255 fl~~S~HK~~GgP~-----G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~--~~~~~~~rfE~GT~n~---~~i~ 324 (805)
T PLN02724 255 FVVVSFYKIFGYPT-----GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK--RRERVEQRFEDGTISF---LSIA 324 (805)
T ss_pred EEEEecceeccCCC-----CceEEEEehhhhhhhcCCccCCCceEEEecccceee--ccccHHHHhcCCCcch---hHHH
Confidence 999999 5444343 5789999999988888888775 22100 0111211 1112345789999999 5666
Q ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCC------CEEEcCCC--------CcceEEEecCC-------HH
Q 001990 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG------TVEVQGLP--------FFDTVKVKCAD-------AH 486 (985)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g------~~~~~~~~--------~~~~~~i~~~~-------~~ 486 (985)
++.+++ .++...|++++.++..++++||.+.|+++. ++++++.. ...+|+|++.+ ..
T Consensus 325 ~l~aal--~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~ 402 (805)
T PLN02724 325 ALRHGF--KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHR 402 (805)
T ss_pred HHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHH
Confidence 777776 555556899999999999999999999873 37787432 23467776543 34
Q ss_pred HHHHHHHHcCceeee------------e---------------------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001990 487 AIASAAYKIEMNLRV------------V---------------------------DSNTVTASFDETTTLEDVDKLFIVF 527 (985)
Q Consensus 487 ~l~~~L~~~Gi~~~~------------~---------------------------~~~~lris~~~~~t~edid~ll~~l 527 (985)
++.+.+.++||.++. + ..+.+|+|++.|||.+|||+|+++|
T Consensus 403 ~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l 482 (805)
T PLN02724 403 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFI 482 (805)
T ss_pred HHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHH
Confidence 455555667997631 0 1278999999999999999999999
Q ss_pred hCC
Q 001990 528 AGG 530 (985)
Q Consensus 528 ~~~ 530 (985)
...
T Consensus 483 ~~~ 485 (805)
T PLN02724 483 ISS 485 (805)
T ss_pred HHH
Confidence 853
No 67
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.90 E-value=2.7e-21 Score=223.19 Aligned_cols=308 Identities=13% Similarity=0.122 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHhCC-Cccce-ecChHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEcCCCCCCcHHH---HHhcCcEEEE
Q 001990 633 MFNNLGEWLCTITGF-DSFSL-QPNAGAAGEYAGLMVIRAYHKARG-DHHRNVCIIPVSAHGTNPAT---AAMCGMKIVS 706 (985)
Q Consensus 633 ~~~el~~~la~l~G~-~~~~~-~~~sGa~g~~a~l~air~~~~~~g-~~~~~~Vlv~~~~Hg~~~~~---~~~~G~~v~~ 706 (985)
.+.+.++.+.+.+|. +...+ +.++++++. .++++.+....- ..++++|+++...|+++... ++..|++++.
T Consensus 43 ~l~~a~~~~~~~~~~~~~~~i~~t~g~teal---~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~ 119 (382)
T TIGR03403 43 AIAEALDKLYKGINARDLDDIIITSCATESN---NWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTY 119 (382)
T ss_pred HHHHHHHHHHHHcCcCCCCeEEEeCCHHHHH---HHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEE
Confidence 345555566666776 34444 445555444 333333211000 11346899998888776554 3468999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCc
Q 001990 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~D 785 (985)
+|++++|.+|+++++++++ +++++|++++| |++|.+. |+++|+++||++|+++++|++|..+...+ +..++++|
T Consensus 120 v~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~~ivD~a~~~g~~~~-~~~~~~~D 194 (382)
T TIGR03403 120 LPINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIF-PIKEIGEICKERGVLFHTDAVQAIGKIPV-DVQKAGVD 194 (382)
T ss_pred EecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCcccc-CHHHHHHHHHHcCCEEEEechhhcCCCcc-CccccCCC
Confidence 9998889999999999997 78899999988 5799998 89999999999999999999987554332 44568999
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
++++++||++ |.||+|++++++.+. +.+.+.|... ...++.+|.++.. . .++...+..+ .
T Consensus 195 ~~~~s~~K~~------gp~G~g~l~vr~~~~--~~p~~~g~~~---~~~~~~gt~~~~~----~----~al~~al~~~-~ 254 (382)
T TIGR03403 195 FLSFSAHKFH------GPKGVGGLYIRKGVE--LTPLFHGGEH---MGGRRSGTLNVPY----I----VAMGEAMRLA-N 254 (382)
T ss_pred EEEEcchhhC------CCCceEEEEECCCCC--CCCcccCCCC---CCCcccCCcChHH----H----HHHHHHHHHH-H
Confidence 9999999976 445889999987642 2122222110 0112234444321 1 1112233322 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCC-ceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC---CC-C-
Q 001990 866 KGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MS-W- 939 (985)
Q Consensus 866 ~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~-~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~---~~-~- 939 (985)
+.+....++...+++++.++|++...+.+.++.. ...+.+.+.+. +++..++.+.|.++||.+.. |. .
T Consensus 255 ~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gI~v~~g~~c~~~~ 328 (382)
T TIGR03403 255 EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK------GVEGEAMLWDLNKAGIAASTGSACASED 328 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC------CCCHHHHHHhhccCCEEEEchhccCCCC
Confidence 3455556677788889999997633333333211 11223445554 56788899999999999753 21 0
Q ss_pred --C-------------CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 940 --P-------------VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 940 --p-------------v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
+ ..+.+|+|++.++|++||| +|+++|++++++++.
T Consensus 329 ~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did---~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 329 LEANPVMVAIGADKELAHTAIRLSLSRFTTEEEID---YTIEVFKKAVQRLRA 378 (382)
T ss_pred CCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHH---HHHHHHHHHHHHHHh
Confidence 0 1267999999999999999 999999999887653
No 68
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.90 E-value=1.4e-21 Score=225.17 Aligned_cols=307 Identities=15% Similarity=0.133 Sum_probs=207.2
Q ss_pred cHHHHHHHHHHHHHHHhCCCcc-c-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCc
Q 001990 629 GYQEMFNNLGEWLCTITGFDSF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGM 702 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~-~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~ 702 (985)
+..+.+.++++++++++|.+.. . ++.++++++...+ ++.+ ..++++|+++...|+++... ++..|+
T Consensus 41 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~---~~~~-----~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~ 112 (376)
T TIGR01977 41 RASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIA---LKGL-----LKEGDHVITTPMEHNSVARPLECLKEQIGV 112 (376)
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHH---HHhc-----cCCCCEEEECcchhhHHHHHHHHHHHHcCc
Confidence 3446688899999999998643 3 4445555554333 3322 13678999988877765432 345699
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCc
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~ 781 (985)
+++.++.+.++.+|+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|++|..+...+ ....
T Consensus 113 ~~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~-~~~~i~~l~~~~~~~livD~a~~~g~~~~-~~~~ 187 (376)
T TIGR01977 113 EITIVKCDNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL-PIEEIGELAQENGIFFILDAAQTAGVIPI-DMTE 187 (376)
T ss_pred EEEEEecCCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC-CHHHHHHHHHHcCCEEEEEhhhccCccCC-Cchh
Confidence 99999998888999999999997 78999999998 4699998 89999999999999999999997655443 2346
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccc-cCcCCCCcccc-C--CCC---CCCCCCCCCCCcccccchhhhHHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVS-T--GGI---PAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l-~~~lpg~~~g~-~--~~~---~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
+++|++++++|||++.| +|.|+++++++. .+.+.....+. . .+. ...+.+.+|.++. .+.
T Consensus 188 ~~~D~~~~s~~K~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~--------~~~ 254 (376)
T TIGR01977 188 LAIDMLAFTGHKGLLGP-----QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTP--------GIA 254 (376)
T ss_pred cCCCEEEecccccccCC-----CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHH--------HHH
Confidence 78999999999999532 367788887653 11111100000 0 000 0001223333222 122
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC-C
Q 001990 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-G 931 (985)
Q Consensus 855 ~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~-G 931 (985)
+..+.++.+...|+..+.++...+++++.+.|.+. +.+..+.+.......+.+.++ +.+..++.+.|.++ |
T Consensus 255 a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~~g 328 (376)
T TIGR01977 255 GLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE------GIDSEEVADILDEKFD 328 (376)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC------CCCHHHHHHHHhccCC
Confidence 33445666667777778888899999999999863 333211111111223444443 46788999999987 8
Q ss_pred CccCC---CC--------CCCCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 932 FHGPT---MS--------WPVPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 932 i~~~~---~~--------~pv~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
|.+.. +. ....+.+|++++.++|++||+ +++++|++
T Consensus 329 i~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~---~~~~~l~~ 375 (376)
T TIGR01977 329 IATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIE---KLLEALSE 375 (376)
T ss_pred EEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHH---HHHHHHhh
Confidence 88642 11 002478999999999999999 99999975
No 69
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.90 E-value=9.6e-22 Score=228.68 Aligned_cols=304 Identities=14% Similarity=0.157 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHhCCCccce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEE---
Q 001990 633 MFNNLGEWLCTITGFDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKI--- 704 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v--- 704 (985)
...++++ + +++|++...+ +..+++++. ..+++.+. .++ .++++|+++...|++.... ++..|+++
T Consensus 72 ~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l---~~~~~~~~-~~~-~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~ 144 (406)
T TIGR01814 72 LDESLLK-L-RLVGAKEDEVVVMNTLTINL---HLLLASFY-KPT-PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEES 144 (406)
T ss_pred hhhhhcc-c-cccCCCCCcEEEeCCchHHH---HHHHHHhc-CCc-CCccEEEecCCCCChHHHHHHHHHHhcCCCcccc
Confidence 3334444 4 8999876544 444444443 22333321 111 1234678887888774332 34678887
Q ss_pred -EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC
Q 001990 705 -VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (985)
Q Consensus 705 -~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~ 782 (985)
+.++.+.+|.+|++++++.+++..++|++|++++++ .+|.+. |+++|+++||++|++++||++|+.+...+ +..++
T Consensus 145 ~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~-~~~~i~~~~~~~g~~~~vD~aq~~G~~~i-d~~~~ 222 (406)
T TIGR01814 145 MVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLF-DMAAITRAAHAKGALVGFDLAHAVGNVPL-DLHDW 222 (406)
T ss_pred eEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceec-CHHHHHHHHHHcCCEEEEEcccccCCccc-ccccC
Confidence 567766678899999999986545789999999985 689998 89999999999999999999998776654 44578
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC-------------CCCCCCCCCCCcccccchh
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI-------------PAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~-------------~~~~~~~~t~~i~s~~~g~ 849 (985)
|+|++++++||||+ |||| |+++++++....+.+...|+.... ...+++.+|+++.+
T Consensus 223 gvD~~~~s~hK~l~-----g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~----- 291 (406)
T TIGR01814 223 GVDFACWCTYKYLN-----AGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILS----- 291 (406)
T ss_pred CCCEEEEcCccccC-----CCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHH-----
Confidence 99999999999994 5677 556665432222222222321110 00112334444331
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccC----CeeEcCCCCc--eeEEEEEEecCccccCCCCHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY----PILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDV 923 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~----~i~~~g~~~~--~~~~~vv~~~~~~~~~g~~~~~l 923 (985)
+....+++..+...|+.+..++...+++++++.|++.. .+...++.++ ....+.+.++ .+..++
T Consensus 292 ---~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-------~~~~~~ 361 (406)
T TIGR01814 292 ---VAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-------VPGKAV 361 (406)
T ss_pred ---HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-------CCHHHH
Confidence 12223345555455677777888899999999987631 1322222111 1122344432 357889
Q ss_pred HHHHHHCCCccCCCCCCCCCEEEEec-cCCCCHHhhchHHHHHHHHHHHH
Q 001990 924 AKRLMDYGFHGPTMSWPVPGTLMIEP-TESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 924 ~~~L~e~Gi~~~~~~~pv~~~lris~-t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.+.|.++||.+... .++.||+|+ +.+||++||| +++++|++++
T Consensus 362 ~~~L~~~gi~v~~~---~~~~iRiS~~~~~nt~~did---~l~~~l~~~~ 405 (406)
T TIGR01814 362 FQALIKRGVIGDKR---EPSVIRVAPVPLYNTFVDVY---DAVNVLEEIL 405 (406)
T ss_pred HHHHHHCCEEEecc---CCCeEEEechhccCCHHHHH---HHHHHHHHHh
Confidence 99999999987421 137899999 5899999999 9999998764
No 70
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=1.9e-21 Score=228.55 Aligned_cols=302 Identities=19% Similarity=0.204 Sum_probs=202.4
Q ss_pred HHHHHH-HHHHHHHHhCCCccc----eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHH-------
Q 001990 631 QEMFNN-LGEWLCTITGFDSFS----LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA------- 698 (985)
Q Consensus 631 ~~~~~e-l~~~la~l~G~~~~~----~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~------- 698 (985)
.+.+++ .++.+++++|.+... +.+.||+.++.+++.++ . +++++||+++..|+.+.....
T Consensus 78 ~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al---~-----~~gd~Ii~~~~ehg~~l~~~~~l~~~~~ 149 (452)
T PTZ00094 78 VDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL---L-----QPHDRIMGLDLPSGGHLTHGFYTAKKKV 149 (452)
T ss_pred HHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh---c-----CCCCEEEecccccCCccccccccccccc
Confidence 345553 678999999997643 33457777664444443 1 367899999988988754321
Q ss_pred ---hcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccC
Q 001990 699 ---MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 775 (985)
Q Consensus 699 ---~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g 775 (985)
..++++..++++.+|.+|+++|+++++++ ++++|++.+ +.+|... |+++|+++||++|++++||++|..|+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~~-s~~g~~~-di~~I~~i~~~~ga~l~vDaaq~~G~i~ 225 (452)
T PTZ00094 150 SATSIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAGA-SAYPRDI-DYKRFREICDSVGAYLMADIAHTSGLVA 225 (452)
T ss_pred ccceeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEeC-CCCCCcc-CHHHHHHHHHHcCCEEEEeccchhcccc
Confidence 12245666777778999999999999743 344555544 4588888 8999999999999999999999877754
Q ss_pred CC---CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 776 LT---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 776 ~~---~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
.. .+ ..++|++++++|||| +||.+|++++++.+.+.+.... .. ...+...+++ +...
T Consensus 226 ~~~~~~~-~~~~D~l~~S~hK~l------~GP~Gg~l~~~~~~~~~l~~~~-~~----------~~~p~~~G~~--~~~~ 285 (452)
T PTZ00094 226 AGVLPSP-FPYADVVTTTTHKSL------RGPRSGLIFYRKKVKPDIENKI-NE----------AVFPGLQGGP--HNHQ 285 (452)
T ss_pred CCCCCCC-CCCCcEEEcCCccCC------CCCCceEEEEecccchHHHHhh-cc----------ccCCCCCCCc--hHHH
Confidence 32 12 237999999999999 4675688888765543221110 00 0000001100 1112
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
+++..+.+..+...++.+..++..+++++|.+.|.+ ++++...+. . .+..++++.. .+.+..++...|.++|
T Consensus 286 iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~-~--~~~~~v~~~~----~~~~~~~~~~~L~~~g 358 (452)
T PTZ00094 286 IAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT-D--NHLVLVDLRP----FGITGSKMEKLLDAVN 358 (452)
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC-C--CceEeecCCc----CCCCHHHHHHHHHHCC
Confidence 223334456554556677778889999999999977 666654322 1 1234555541 3567889999998899
Q ss_pred CccCCCCCC------CCCEEEEeccCCCC----HHhhchHHHHHHHHHHHHHH
Q 001990 932 FHGPTMSWP------VPGTLMIEPTESES----KVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 932 i~~~~~~~p------v~~~lris~t~~~t----~eeId~~~~~i~aL~~i~~~ 974 (985)
|.++...-| .+++||++++.++| ++||+ +++++|.+++..
T Consensus 359 I~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~---~l~~~l~~~~~~ 408 (452)
T PTZ00094 359 ISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK---FVADFLDRAVKL 408 (452)
T ss_pred cEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH---HHHHHHHHHHHH
Confidence 998532111 24789999988876 99999 999999998874
No 71
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.89 E-value=5.5e-21 Score=222.01 Aligned_cols=288 Identities=15% Similarity=0.129 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc
Q 001990 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~-~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~ 288 (985)
.+.+.++++.+++++|.++.++.+..|+|.+++.++.++.. ..+++++|+++..+|+++...++.. +..|++++.++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEcc
Confidence 46788899999999999888898899999888876654421 1237899999999999999988653 456888888754
Q ss_pred --------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001990 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (985)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k 357 (985)
+++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ ..+.|... +..++|+|+++++++
T Consensus 125 ~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~-a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDA-AQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEc-chhcCCcccCccccCCCEEEEehh
Confidence 34555 7788999999987 689999999999999999999999942 34566443 446789999999995
Q ss_pred cccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001990 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (985)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~ 437 (985)
++.+| +|.|+++++++....+.+.+.| +.. ..+.+.||.|+ ..+.++.+++ .+
T Consensus 204 K~~gp-----~G~G~l~~~~~~~~~~~~~~~g------~~~-----------~~~~~~gt~~~---~~~~al~~al--~~ 256 (402)
T TIGR02006 204 KIYGP-----KGIGALYVRRKPRVRLEALIHG------GGH-----------ERGMRSGTLPT---HQIVGMGEAF--RI 256 (402)
T ss_pred hhcCC-----CceEEEEEccCCCCCCCceecC------CCc-----------cCCccCCCccH---HHHHHHHHHH--HH
Confidence 45433 4689999998765555443333 110 01235688887 4566666665 23
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--Cc-c--eEEEecCCHHHHHHHHHHcCceeee-----------
Q 001990 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FF-D--TVKVKCADAHAIASAAYKIEMNLRV----------- 501 (985)
Q Consensus 438 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~-~--~~~i~~~~~~~l~~~L~~~Gi~~~~----------- 501 (985)
+ .++++++.++..+++++++++|+++.++++.+++ .. . .|+|......++...| +||.++.
T Consensus 257 ~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~ 333 (402)
T TIGR02006 257 A-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEP 333 (402)
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCc
Confidence 2 3478889999999999999999987558876421 22 1 2444422256676666 3553310
Q ss_pred ------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 502 ------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 ------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
...+.+|+|++.+||++|+|+++++|..
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 0137899999999999999999999974
No 72
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.89 E-value=5.2e-21 Score=220.89 Aligned_cols=288 Identities=17% Similarity=0.136 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHhhCC-CCcceeeccchHHHHHHHHHHhhh---hcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEE
Q 001990 210 LESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~-~~~~~sl~~~~ta~~ea~~~a~~~---~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~ 285 (985)
.+.+.+....+++.+|. ++.++.+++|+|.++..++.++.+ .+.++++|+++..+||++...+.. ++..|++++.
T Consensus 41 ~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~~ 119 (382)
T TIGR03403 41 HPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVTY 119 (382)
T ss_pred HHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEEE
Confidence 45566666777777777 567888899998776665544321 112357899999999999998864 4568999988
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001990 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (985)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-~~p~~~GaDi~v~ 354 (985)
++. +++++ +++++++|++++| |++|.+.|+++|.++||++|++++||+ ..+.|.. .+..++|+|+++.
T Consensus 120 v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~-a~~~g~~~~~~~~~~~D~~~~ 198 (382)
T TIGR03403 120 LPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA-VQAIGKIPVDVQKAGVDFLSF 198 (382)
T ss_pred EecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEec-hhhcCCCccCccccCCCEEEE
Confidence 864 34555 7788999999887 789999999999999999999999953 3455533 2456799999999
Q ss_pred cCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001990 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (985)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y 434 (985)
++++|.+| ||.|++++++++ .+.+.+.|. .. ..+++.||.|+ .+++++.+++
T Consensus 199 s~~K~~gp-----~G~g~l~vr~~~--~~~p~~~g~------~~-----------~~~~~~gt~~~---~~~~al~~al- 250 (382)
T TIGR03403 199 SAHKFHGP-----KGVGGLYIRKGV--ELTPLFHGG------EH-----------MGGRRSGTLNV---PYIVAMGEAM- 250 (382)
T ss_pred cchhhCCC-----CceEEEEECCCC--CCCCcccCC------CC-----------CCCcccCCcCh---HHHHHHHHHH-
Confidence 99445433 578999999765 233333331 00 01134588887 4565666665
Q ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C-cceEEEecCC--HHHHHHHHHHcCceeee--------
Q 001990 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV-------- 501 (985)
Q Consensus 435 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~-~~~~~i~~~~--~~~l~~~L~~~Gi~~~~-------- 501 (985)
.++ .++++...++..++.++++++|+++++++++++. . .+.+.|.+++ +.++.+.|.++||.++.
T Consensus 251 -~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~ 328 (382)
T TIGR03403 251 -RLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASED 328 (382)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCC
Confidence 222 3457888899999999999999988559887532 2 1244555554 78888889999998862
Q ss_pred ---------e------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 502 ---------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 ---------~------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+ ..+.+|+|++.+||++|||+|+++|+.
T Consensus 329 ~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 329 LEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred CCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 025799999999999999999999974
No 73
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.89 E-value=1.7e-20 Score=221.16 Aligned_cols=376 Identities=14% Similarity=0.161 Sum_probs=231.6
Q ss_pred CCccccccCCHHHHHHHHHHHh-cCccCcCcccccccceecccCccc---cccccccccccccCCCCcchhhhcHHHHHH
Q 001990 560 THPVFNKYHTEHELLRYIHLLQ-SKELSLCHSMIPLGSCTMKLNATT---EMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (985)
Q Consensus 560 ~~pv~~~~~se~e~~~~l~~l~-~~~~~~~~~~~~lGs~~~~~~~~~---~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~ 635 (985)
.+| ..+.+..+.++.+.+.- .....+ ....|+|+-+..++... ...... .|-+.+.. +.++...++..
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~hP~f~g~~~~~~p~~~~~l~~l~~~----lN~n~~~~-~~spa~t~lE~ 132 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHT-ASPSFIGHMTSALPYFMLPLSKLMVA----LNQNLVKI-ETSKAFTPLER 132 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCC-CCCCeEEeccCCCchHHHHHHHHHHH----hcCCccee-ecCcchHHHHH
Confidence 456 46677778888865443 333333 34567775222122211 111111 12122222 55778888999
Q ss_pred HHHHHHHHHhCC------------Cc--cceecChHHHHHHHHHHHHHHHHHhc-----CC-------------CCCCEE
Q 001990 636 NLGEWLCTITGF------------DS--FSLQPNAGAAGEYAGLMVIRAYHKAR-----GD-------------HHRNVC 683 (985)
Q Consensus 636 el~~~la~l~G~------------~~--~~~~~~sGa~g~~a~l~air~~~~~~-----g~-------------~~~~~V 683 (985)
++..|++++++. +. ..++.++|+.+++.++.++|.....+ +. .++..|
T Consensus 133 ~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v 212 (522)
T TIGR03799 133 QVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAI 212 (522)
T ss_pred HHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEE
Confidence 999999999852 11 13566788888888888887643211 00 124578
Q ss_pred EEcCCCCCCcHHHHHhcCc---EEEEEeCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-CccccccCHHHHHHHH
Q 001990 684 IIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKII 756 (985)
Q Consensus 684 lv~~~~Hg~~~~~~~~~G~---~v~~v~~~~~g~iDle~L~~~i~~~---~~~t~~Vvi~~pn-~~G~i~~di~eI~~la 756 (985)
++++.+|.++.+.+...|+ +++.||+|++|.+|+++|+++|++. +..+.+|+.+..+ .+|.++ ||++|+++|
T Consensus 213 ~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD-pl~eIa~i~ 291 (522)
T TIGR03799 213 LVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID-PLDEMADIA 291 (522)
T ss_pred EECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC-CHHHHHHHH
Confidence 8899999999888888888 8999999999999999999999632 1234444444544 599999 899999999
Q ss_pred HHcCCEEEEEccccccccCCC-----CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecc-cccCcCCC---Cccc-c
Q 001990 757 HDNGGQVYMDGANMNAQVGLT-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS---HPVV-S 826 (985)
Q Consensus 757 ~~~g~lliVD~a~~~~~~g~~-----~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg---~~~g-~ 826 (985)
+++|+|+|||+|+..+..... -.+..++|++++++|||+..|+ |.|++++++ .+.+.+.. ++.. .
T Consensus 292 ~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~-----g~G~llvr~~~~~~~~~~~~~Yl~~~~ 366 (522)
T TIGR03799 292 QELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPM-----GAGMVLFKDPALMSAIEHHAEYILRKG 366 (522)
T ss_pred HHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCc-----ccEEEEEeCHHHHHHhccCcchhcCCC
Confidence 999999999999853322111 0122479999999999996543 567888875 33332221 1100 0
Q ss_pred CCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEE
Q 001990 827 TGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHE 904 (985)
Q Consensus 827 ~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~ 904 (985)
..+.. .. .+.+++ ...+...|+.++.+|.+|+.++.++.++++++|.+.|++ ++++..+ +..+.
T Consensus 367 ~~d~~----~~---~legsR---~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~----p~l~i 432 (522)
T TIGR03799 367 SKDLG----SH---TLEGSR---PGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE----PELCL 432 (522)
T ss_pred CCccc----cc---eeecCc---chHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC----CCccE
Confidence 00000 00 111111 122345799999999999999999999999999999986 4555432 33445
Q ss_pred EEEEecCc--ccc-----------CC--CC--HHHHHHHHHHCCCcc-C-C-CC---CC-C-CCEEEEec-cCCCCHHhh
Q 001990 905 FIVDLRGL--KNT-----------AG--IE--PEDVAKRLMDYGFHG-P-T-MS---WP-V-PGTLMIEP-TESESKVCH 958 (985)
Q Consensus 905 ~vv~~~~~--~~~-----------~g--~~--~~~l~~~L~e~Gi~~-~-~-~~---~p-v-~~~lris~-t~~~t~eeI 958 (985)
++|.+.+- ... .+ .+ ...+.++|.+.|... + + +. |. . ...+|+++ .+.+|++||
T Consensus 433 v~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i 512 (522)
T TIGR03799 433 LTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEIL 512 (522)
T ss_pred EEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHH
Confidence 66654320 000 00 00 134566667777653 2 1 11 11 0 13589987 567888888
Q ss_pred chHHHHHH
Q 001990 959 NREDLFFQ 966 (985)
Q Consensus 959 d~~~~~i~ 966 (985)
+ .+++
T Consensus 513 ~---~~l~ 517 (522)
T TIGR03799 513 Q---DILD 517 (522)
T ss_pred H---HHHH
Confidence 8 6544
No 74
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.89 E-value=1.3e-21 Score=223.04 Aligned_cols=313 Identities=19% Similarity=0.229 Sum_probs=201.6
Q ss_pred CCccccccCCHHHHHHHHHHHhcCccCcCcccccccceecccCc---cccccccccccccccCCCCcchhhhcHHHHHHH
Q 001990 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNA---TTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (985)
Q Consensus 560 ~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~---~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~e 636 (985)
.+| +++.+.+++++.+.+.........+...++|.-+..... ..++.. .+.|-+.+.. +.++...++..+
T Consensus 11 ~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~----~~~n~n~~~~-~~~P~~~~~E~~ 83 (373)
T PF00282_consen 11 ELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLA----SALNQNGFTW-EASPAATEIERE 83 (373)
T ss_dssp CHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHH----HHHT-BTTST-TTSHHHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHH----hhhccccccc-ccccccccchHH
Confidence 556 567889999999987665554333445566632111111 112211 1222222332 557788899999
Q ss_pred HHHHHHHHhCCCc--------cceecChHHHHHHHHHHHHHHHHH----hcCC--CCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 637 LGEWLCTITGFDS--------FSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 637 l~~~la~l~G~~~--------~~~~~~sGa~g~~a~l~air~~~~----~~g~--~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
+.+|+++++|.+. ..+++++|+++++.+++++|.... ..|. .++..|++++.+|.+..+++.+.|+
T Consensus 84 vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGl 163 (373)
T PF00282_consen 84 VIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGL 163 (373)
T ss_dssp HHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTS
T ss_pred HHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeee
Confidence 9999999999982 346778888888888888876542 1231 1234677899899999999999999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCC--CeE-EEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEcccccccc--CC
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRD--NLS-TLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--GL 776 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~--~t~-~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~--g~ 776 (985)
.++.||+|+++++|+++|+++|++... .+. +|+.+.++ .+|.++ ||++|+++|+++++|+|||+|+.-+.. ..
T Consensus 164 g~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D-~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~ 242 (373)
T PF00282_consen 164 GVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID-PLEEIADICEKYNIWLHVDAAYGGSALLSPE 242 (373)
T ss_dssp EEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred EEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCccccccc-CHHHHhhhccccceeeeeccccccccccccc
Confidence 999999999999999999999875322 233 56667775 599999 899999999999999999998742111 11
Q ss_pred CC---CCcCCCcEEEeCCcccccccCCCCCCcceeeeeccc--ccCcC--CCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 777 TS---PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL--PSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 777 ~~---~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~--l~~~l--pg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
.+ .+-..+|.++.++|||++.|+++ |++.+|+. +...+ ...+++...............++..+ -
T Consensus 243 ~~~~~~gi~~adSit~d~HK~l~~P~~~-----~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~S---R 314 (373)
T PF00282_consen 243 YRHLLFGIERADSITIDPHKWLGVPYGC-----GVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGS---R 314 (373)
T ss_dssp TGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSS---G
T ss_pred ccccccccccccccccchhhhhcCCccc-----eeEEeecccchHHHhccChhhhccccccccccccccccccccc---c
Confidence 11 13345899999999999888654 57778753 22211 00111100000000000111122222 2
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
...++..|..++.+|.+|+.+..++.++++++|+++|++
T Consensus 315 ~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~ 353 (373)
T PF00282_consen 315 RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK 353 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344677899999999999999999999999999999998
No 75
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=9.5e-21 Score=218.63 Aligned_cols=292 Identities=14% Similarity=0.096 Sum_probs=210.1
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhh-cCCCCEEEEcCCCChhHHHHHHHhhcCCCeEE
Q 001990 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~-~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v 283 (985)
......+.+.++++.+|+++|.++.++.+.+|+|.++..++.++... .+++++|+++..+||++...++. ++..|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v 115 (381)
T PRK02948 37 IGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQS-LESQGYTV 115 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHH-HHhCCCEE
Confidence 33445577889999999999998888888888888777665444210 12678999999999999998865 45678888
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001990 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (985)
Q Consensus 284 ~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~ 352 (985)
+.++. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++||+ .+++|... ...++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~-~~~~g~~~~~~~~~~~d~~ 194 (381)
T PRK02948 116 TEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDC-VQTFGKLPIDVFEMGIDSL 194 (381)
T ss_pred EEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEC-hhhccccccCcccCCCCEE
Confidence 88754 34555 6778999999998 689999999999999999999999963 44565432 3467999999
Q ss_pred EecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001990 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 353 v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
+.+++++.+| ||+|+++++++.. +.....| . .+..+.+.+|.|+ .+..++.++
T Consensus 195 ~~s~~K~~gp-----~G~G~l~~~~~~~--~~~~~~~-------~----------~~~~~~~~~t~~~---~~~~a~~~a 247 (381)
T PRK02948 195 SVSAHKIYGP-----KGVGAVYINPQVR--WKPVFPG-------T----------THEKGFRPGTVNV---PGIAAFLTA 247 (381)
T ss_pred EecHHhcCCC-----CcEEEEEEcCCCC--CCCcccC-------C----------CCCCCcCCCCccH---HHHHHHHHH
Confidence 9998434323 5689999987641 1110000 0 0112235677776 455555555
Q ss_pred HHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc--CCC--Cc-ceEEEecCC--HHHHHHHHHHcCceeeee---
Q 001990 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--GLP--FF-DTVKVKCAD--AHAIASAAYKIEMNLRVV--- 502 (985)
Q Consensus 433 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~--~~~--~~-~~~~i~~~~--~~~l~~~L~~~Gi~~~~~--- 502 (985)
+ ..+ .++++++.+++.++.++++++|+++| +++. +.+ .. ..+.+..++ +.++.+.|.++||.++..
T Consensus 248 l--~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c 323 (381)
T PRK02948 248 A--ENI-LKNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSAC 323 (381)
T ss_pred H--HHH-HHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhc
Confidence 5 222 23678889999999999999999987 6543 211 12 234455554 778888898899988631
Q ss_pred --------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 --------------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 --------------------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..+.+|+|++.+||++|+|+++++|..
T Consensus 324 ~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 324 QVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 036899999999999999999999974
No 76
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.89 E-value=2.5e-21 Score=224.53 Aligned_cols=318 Identities=10% Similarity=0.017 Sum_probs=216.4
Q ss_pred hcHHHHHHHHHHHHHHHhCCCc--cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH--HHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~--~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~--~~~~~~G~~ 703 (985)
.+..++++++++++++++|.+. ..+++++|+.++++++. .. ..++|+||+++..|.... ..++..|++
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~---~~-----~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~ 109 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALT---NT-----LSPGDKVVSFRIGQFSLLWIDQMQRLNFD 109 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHH---hc-----CCCCCEEEEeCCCchhHHHHHHHHHcCCc
Confidence 4566788899999999999875 24666666655533332 21 147789999887665443 235678999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccCHHHHHHH--HHHcCCEEEEEccccccccCCCCC
Q 001990 704 IVSVGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKI--IHDNGGQVYMDGANMNAQVGLTSP 779 (985)
Q Consensus 704 v~~v~~~~~g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~di~eI~~l--a~~~g~lliVD~a~~~~~~g~~~~ 779 (985)
++.++.+.++.+|+++++++++++. +++++|+++++ |.+|.+. |+++|+++ ||++|++++||++|+.+...+ +.
T Consensus 110 v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~i-d~ 187 (401)
T PLN02409 110 VDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHPALLLVDGVSSIGALDF-RM 187 (401)
T ss_pred eEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccCcEEEEEcccccCCccc-cc
Confidence 9999987766789999999998421 27899999887 5799998 89999999 999999999999987544332 34
Q ss_pred CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCC-----CccccCC--CCCCCC-CCCCCCCcccccchhhh
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-----HPVVSTG--GIPAPE-KSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg-----~~~g~~~--~~~~~~-~~~~t~~i~s~~~g~~~ 851 (985)
.++++|++++++||||+. +||+|++++++++.+.+.. ..+++.. +....+ ....|+++.
T Consensus 188 ~~~~~D~~~~s~~K~l~~-----P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~-------- 254 (401)
T PLN02409 188 DEWGVDVALTGSQKALSL-----PTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQ-------- 254 (401)
T ss_pred cccCccEEEEcCccccCc-----CCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHH--------
Confidence 578999999999999953 3579999999876554321 1111100 000000 001122221
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-H
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e 929 (985)
...+..+.+..+..+|+.++.++...+++++++.|++ ++++..+.+.........+.++ .+.+..++.+.|. +
T Consensus 255 ~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p-----~~~~~~~l~~~l~~~ 329 (401)
T PLN02409 255 LLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP-----EGIDSAEIVKNAWKK 329 (401)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC-----CCCCHHHHHHHHHHh
Confidence 1122234455555667878888889999999999987 5555322111111112234433 2577888988875 5
Q ss_pred CCCccCCCCCC-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 930 YGFHGPTMSWP-VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 930 ~Gi~~~~~~~p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+||.+.....+ ....+||+...+++.+|+. +++++|++++.++.
T Consensus 330 ~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~---~~~~~~~~~l~~~g 374 (401)
T PLN02409 330 YNLSLGLGLNKVAGKVFRIGHLGNVNELQLL---GALAGVEMVLKDVG 374 (401)
T ss_pred CCEEEEcCCCcccCCEEEEcCCCCCCHHHHH---HHHHHHHHHHHHcC
Confidence 69987543333 2578999999999999999 99999999877644
No 77
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=4.1e-21 Score=211.20 Aligned_cols=334 Identities=19% Similarity=0.274 Sum_probs=228.9
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhC-
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG- 646 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G- 646 (985)
+.+.+..+||+-.+.- ++..||+|++.+......|....-+-++ -|.. +...++.+.|+++++
T Consensus 36 v~D~~G~~YlDf~~Gi------av~~lGH~hP~iv~al~~Q~~kl~h~sn--~~~~--------~~~~~la~~L~~~s~~ 99 (404)
T COG4992 36 VWDQQGREYLDFAAGI------AVNNLGHCHPALVEALKEQAEKLWHVSN--LFYN--------EPQAELAEKLVELSPF 99 (404)
T ss_pred EECCCCCEeeeeccce------eeeccCCCCHHHHHHHHHHHHHhhhccc--ccCC--------hHHHHHHHHHHhhCcc
Confidence 4666777777655432 4678999988877665555422212222 1111 124478889999997
Q ss_pred CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHH-------hcCc-----EEEEEeCCCCC
Q 001990 647 FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAA-------MCGM-----KIVSVGTDAKG 713 (985)
Q Consensus 647 ~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~-------~~G~-----~v~~v~~~~~g 713 (985)
++. .|+.|||+++++++++.+|.|.. + ..+.+||. ..++||....++. ..++ .++.+|++
T Consensus 100 ~d~-vff~NSGaEA~EaAiKlARk~~~--~-~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn--- 172 (404)
T COG4992 100 ADR-VFFCNSGAEANEAALKLARKYTG--D-PEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN--- 172 (404)
T ss_pred ccE-EEEcCCcHHHHHHHHHHHHHHcC--C-CCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC---
Confidence 554 47889999999999999998853 2 13446665 6688986533321 1122 24556664
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC-------
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------- 782 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~------- 782 (985)
|+++++++|+ ++|++|+++-- ...|++.+ -++++.++|++||+++|+|++| .|+.+.|++
T Consensus 173 --Di~al~~ai~---~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ----tG~GRTGk~fA~e~~g 243 (404)
T COG4992 173 --DIEALEAAID---EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQ----TGLGRTGKLFAYEHYG 243 (404)
T ss_pred --CHHHHHHHhc---cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccc----cCCCccchHHHHHHhC
Confidence 9999999998 79999999753 47788763 3899999999999999999876 566777754
Q ss_pred -CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHH
Q 001990 783 -GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (985)
Q Consensus 783 -g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~ 861 (985)
-+||++. .|.+ |+| -.+|.+.+++.....+.+. .| .+++.|++++++++.+.+.
T Consensus 244 V~PDI~tl--aK~L----gGG-~PigA~la~~~~~~~~~~G---------~H---------gSTfGGNpLacAv~~a~l~ 298 (404)
T COG4992 244 VEPDILTL--AKAL----GGG-FPIGAMLATEEIASAFTPG---------DH---------GSTFGGNPLACAVALAVLE 298 (404)
T ss_pred CCCCEEEe--eccc----cCC-ccceeeEEchhhhhcCCCC---------cc---------cCCCCcCHHHHHHHHHHHH
Confidence 2799865 3766 444 4566666665544433211 11 1346788899999999999
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 862 MMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 862 ~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
.+.++++.+ +..+..++|+++|++. ++++ +.|. -.+.. +.+. ....+.++.+.|.++|+++..
T Consensus 299 ~l~~e~ll~---~v~~~g~~~~~~L~~l~~~~~~v~~vRG~--GLmiG--iel~-----~~~~a~~~~~~~~~~gvL~~~ 366 (404)
T COG4992 299 VLLEEGLLE---NVREKGEYLLQRLRELKRRYPLVKEVRGR--GLMIG--IELK-----EPYRARDIVRALREEGVLVLP 366 (404)
T ss_pred HHcchhHHH---HHHHHHHHHHHHHHHHhhcCCceeeeecc--eeEEE--EEec-----CcccHHHHHHHHHHCCeEEec
Confidence 998887664 5567788999999862 3322 1121 12222 2222 012478999999999998754
Q ss_pred CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 937 MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 937 ~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.. ++.||+.|....|+|||| ..+++|+++++...
T Consensus 367 a~---~~ViR~~PpL~i~~eei~---~~~~~l~~~l~~~~ 400 (404)
T COG4992 367 AG---PNVIRFLPPLVITEEEID---EALDALERALAAAS 400 (404)
T ss_pred CC---CCeEEecCCccCCHHHHH---HHHHHHHHHHHHhh
Confidence 33 479999999999999999 99999999887644
No 78
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.88 E-value=9.7e-21 Score=217.08 Aligned_cols=317 Identities=11% Similarity=0.070 Sum_probs=203.3
Q ss_pred cHHHHHHHHHHHHHHHhCCCcc---ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCc-HHHHHhcCcE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTN-PATAAMCGMK 703 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~---~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~-~~~~~~~G~~ 703 (985)
.+.+.++++++.+++++|.+.. .+++++|++|..+++.++. .+++++|+ ....|+.. ...++..|++
T Consensus 32 ~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~a~~~g~~ 103 (363)
T TIGR02326 32 DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--------PKDGKLLVVINGAYGARIVQIAEYLGIP 103 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--------CCCCeEEEEeCChhhHHHHHHHHHcCCc
Confidence 3556788999999999999752 3455677776644443331 24455544 55444432 2335778999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC
Q 001990 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (985)
Q Consensus 704 v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~ 782 (985)
++.++.++++.+|+++++++++++ +++++|.++++ |.+|++. |+++|+++||++|++++||++|..+...+ +...+
T Consensus 104 ~~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g~~livD~~~~~g~~~~-~~~~~ 180 (363)
T TIGR02326 104 HHVVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILN-PIEAVAKLAHRHGKVTIVDAMSSFGGIPI-DIAEL 180 (363)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccC-cHHHHHHHHHHcCCEEEEEccccccCccc-chhhc
Confidence 999999888899999999999743 45666777775 5799998 89999999999999999999986544332 34567
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCC-C---CCCCCCCCCcccccchhhhHHHHHHH
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP-A---PEKSQPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~-~---~~~~~~t~~i~s~~~g~~~~~~~A~a 858 (985)
++|++++++||||+ |+||+|+++++++..+.+.+...+...+.. . .....+......+ . ....+..+
T Consensus 181 ~~D~~~~s~~K~l~-----~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~---~-~~~~al~~ 251 (363)
T TIGR02326 181 HIDYLISSANKCIQ-----GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP---T-HVVHAFAQ 251 (363)
T ss_pred CccEEEecCccccc-----cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc---H-HHHHHHHH
Confidence 89999999999994 456889999997765443221111000000 0 0000000000011 1 11112223
Q ss_pred HHHHhchh-hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 859 YIAMMGSK-GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 859 ~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
.+..+..+ |+.++.++..++++++++.|++ ++.+... +.........+.++. ....+..++.+.|.++||.+..
T Consensus 252 al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gi~v~~ 327 (363)
T TIGR02326 252 ALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLD-DEIQSPIITSFYSPE---DPDYRFADFYQRLKEQGFVIYP 327 (363)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccC-cccCCceEEEEECCC---CCCCCHHHHHHHHHHCCEEEEC
Confidence 34444444 4777778888999999999987 5554321 100111112233321 0024667899999999999743
Q ss_pred CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 937 MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 937 ~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
...+..+.+||++...+|.+|++ +++++|++++
T Consensus 328 g~~~~~~~iRi~~~~~~~~edv~---~~l~~l~~~l 360 (363)
T TIGR02326 328 GKVSQVDCFRIGNIGEVDAADIT---RLLTAIGKAM 360 (363)
T ss_pred CcCCCCCEEEEecCCCCCHHHHH---HHHHHHHHHh
Confidence 22122478999987789999999 9999998865
No 79
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.88 E-value=9.2e-21 Score=217.63 Aligned_cols=306 Identities=13% Similarity=0.122 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~ 711 (985)
+.+.++++.+|+++|++.+.+ +++|++++.+++.++. .++++||++...|.+....++..|++++.+|++.
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~ 121 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTG 121 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCC
Confidence 346678888999999987654 5777777655444332 3678899988887666666788999999999863
Q ss_pred --CCCCCHHHHHHHHHhc----CCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCC
Q 001990 712 --KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (985)
Q Consensus 712 --~g~iDle~L~~~i~~~----~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~ 784 (985)
++.+|+++|++++++. .+++++|++++|+ ++|.+. |+++|+++|+++|++++||++|..+..+. ....+++
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~-~l~~i~~la~~~~~~livDea~~~g~~~~-~~~~~~~ 199 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP-DAGKVAKVCREKGVPLLLNCAYTVGRMPV-SAKEIGA 199 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc-CHHHHHHHHHHcCCeEEEECccccCCcCC-CHHHcCC
Confidence 4789999999999632 1367889999995 799998 89999999999999999999997543221 2235679
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
|+++.++||+|+. +| ++|++++++++++.+......+. ..... ...++... ..+.++++.+...
T Consensus 200 di~v~s~sK~~~~----~g-~~G~l~~~~~~i~~l~~~~~~~~-------~~~~~-~~~~~~~~--~~~~~~~~al~~~- 263 (370)
T TIGR02539 200 DFIVGSGHKSMAA----SG-PCGVLGMSEEWEDIVLRKSRYSP-------VKEVE-LLGCTSRG--APIVTMMASFPHV- 263 (370)
T ss_pred CEEEeeCcccccC----CC-CEEEEEECHHHHhhhcccccCCc-------cceee-eecccccc--cHHHHHHHHHHHH-
Confidence 9999999999952 23 48999999887776543210000 00000 00000000 1111222223221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccc---cCCCCHHHHHHHHHHCCCc-cCCCCC
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKN---TAGIEPEDVAKRLMDYGFH-GPTMSW 939 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~---~~g~~~~~l~~~L~e~Gi~-~~~~~~ 939 (985)
.+.+. ...+...++++++++|++ ++++....+ ...+.+.++++.... ....+...+.++|.++||. +. +
T Consensus 264 ~~~l~-~~~~~~~~~~~l~~~L~~~g~~~~~~~~--s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir---~ 337 (370)
T TIGR02539 264 VERVK-RWDEEVKKTRWFVAELEDIGFIQLGQKP--KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR---S 337 (370)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhCCcEEEccCC--CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc---C
Confidence 12222 233445556799999987 555421111 112233455431100 0012345799999999997 32 2
Q ss_pred CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 940 PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 940 pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+.++.+|+++. .+|++|++ +++++|++++++
T Consensus 338 ~~~~~iRis~~-~~t~e~i~---~l~~~L~~~~~~ 368 (370)
T TIGR02539 338 GQTKYFKLSVY-GLTKEQVE---YVVDSFEEIVEE 368 (370)
T ss_pred CcceEEEEEec-CCCHHHHH---HHHHHHHHHHHh
Confidence 33468999974 67999999 999999988764
No 80
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.88 E-value=6.6e-21 Score=220.95 Aligned_cols=323 Identities=15% Similarity=0.116 Sum_probs=226.4
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCc-ceeeccchHHHHHHHHHHh
Q 001990 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCN 248 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~-~~sl~~~~ta~~ea~~~a~ 248 (985)
+.+.| |..+|+.|.++ +.++. ..+ . +.+..+.+.+.++.+++++|.+.. .+.+..++|+++++++.++
T Consensus 12 l~~pG--P~~~~~~V~~a-~~~~~--~~~--~----~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPG--PVNIPERVLRA-MNRPN--EDH--R----SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCC--CCCCCHHHHHH-hcCCC--CCC--C----CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 44666 56688887644 33332 222 1 334466778888999999999754 4556678888877766553
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC----CEeEEEEEcC-CCCeeecc
Q 001990 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG----DVCGVLVQYP-GTEGEVLD 314 (985)
Q Consensus 249 ~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~----~t~~V~v~~p-n~~G~i~d 314 (985)
+. +||+||+++..|++.. |...++..|++++.++. +++++ +++ ++++|+++++ |.+|.+.|
T Consensus 81 -~~--~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 81 -LS--PGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -CC--CCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 33 8999999998887654 33445667888887753 34555 543 7899998876 78999999
Q ss_pred HHHHHHH--HHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeee
Q 001990 315 YGDFIKN--AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (985)
Q Consensus 315 l~~I~~~--a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~ 390 (985)
+++|+++ ||++|++++||+ ..++|.+. +..+||+|++++++ |+|++| ||+||+++++++++++...-.
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~-v~s~g~~~id~~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~~-- 227 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDG-VSSIGALDFRMDEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAKS-- 227 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEc-ccccCCccccccccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCCC--
Confidence 9999999 999999999953 44566553 44789999999999 777655 568999999988777632100
Q ss_pred eecCCCCcceEEecccccc---cccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCE
Q 001990 391 SIDSSGKPALRVAMQTREQ---HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (985)
Q Consensus 391 s~d~~g~~~~~l~l~tre~---~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 467 (985)
..+.+.+..... ...+...|+|+ ..++++.+++ .++..+|++++.+++.++++++++.|+++| +
T Consensus 228 -------~~~~~~~~~~~~~~~~g~~~~~Tp~~---~~~~al~~al--~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~ 294 (401)
T PLN02409 228 -------PRVFFDWADYLKFYKLGTYWPYTPSI---QLLYGLRAAL--DLIFEEGLENVIARHARLGEATRLAVEAWG-L 294 (401)
T ss_pred -------CCeecCHHHHHHHHhcCCCCCCCccH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 011222110000 00111235554 5677777776 565678999999999999999999999987 8
Q ss_pred EEcCC-C--CcceE-EEecCC---HHHHHHHHH-HcCceeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 468 EVQGL-P--FFDTV-KVKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 468 ~~~~~-~--~~~~~-~i~~~~---~~~l~~~L~-~~Gi~~~~----~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+++.+ + ....+ .+..+. +.++.+.|. ++||.+.. ..+..+|++.+-+++.+|+.+++++|+.
T Consensus 295 ~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 295 KLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEM 368 (401)
T ss_pred eeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 88742 1 23333 365543 678888876 56998753 2357899999999999999999999985
No 81
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.88 E-value=1.5e-21 Score=219.33 Aligned_cols=316 Identities=18% Similarity=0.213 Sum_probs=231.3
Q ss_pred CCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH
Q 001990 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (985)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea 243 (985)
|.+.++|||...+|..+.+++. .+.+ |.+..+ .++...|+.+.+.++|+.+|+++|.+. +.+|.+|=.+..+
T Consensus 43 nf~SNdYLGLa~~~~~~~a~~~-~~~~---~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~ 114 (388)
T COG0156 43 NFCSNDYLGLASHPELIEAAKA-AIRR---YGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLG 114 (388)
T ss_pred eeeccCcccccCCHHHHHHHHH-HHHH---hCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHH
Confidence 5567889999998887777774 4333 222222 667889999999999999999999997 7788888777777
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-cCC---C--EeEEEEEcC--CCCeeeccH
Q 001990 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG---D--VCGVLVQYP--GTEGEVLDY 315 (985)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~---~--t~~V~v~~p--n~~G~i~dl 315 (985)
++-++. +++|-|+.++.+|.|.++.++ +++..-+.+.+.|+++|++ +.+ . .+.++++.. ++.|.+.|+
T Consensus 115 ~i~~l~---~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 115 LLSALL---KKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHHhc---CCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 666653 267888889999999999997 4555666777788888886 432 1 234555554 889999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCCc-----cc-----ceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCC
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTILKPPGE-----LG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l~~p~~-----~G-----aDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (985)
++|++++++||++++|| +.++.|++.+-|. +| +||++++. |.||. .| ||+.++..+++.+
T Consensus 191 ~~l~~L~~ky~a~L~VD-EAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G----g~v~g~~~~~d~L- 261 (388)
T COG0156 191 PELVELAEKYGALLYVD-EAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG----GYIAGSAALIDYL- 261 (388)
T ss_pred HHHHHHHHHhCcEEEEE-ccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC----ceeeCcHHHHHHH-
Confidence 99999999999999994 6789988875432 33 38999997 99983 34 5888888777665
Q ss_pred CceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC
Q 001990 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (985)
Q Consensus 385 ~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 464 (985)
|.++.+.|+|++..++.+++...+.--.+-..+..++..+++.+++..++..
T Consensus 262 ----------------------------~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 262 ----------------------------RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred ----------------------------HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 1234455666655555555443222212233567788899999999777776
Q ss_pred CCEEEcC-CCCcceEEEecCC-HHHHHHHHHHcCceeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 465 GTVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 465 g~~~~~~-~~~~~~~~i~~~~-~~~l~~~L~~~Gi~~~~~-----~--~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
| +.+.+ ....-++.+..+. +.++.+.|.++||++..+ + ...+|+|+|..||++||++++++|..
T Consensus 314 ~-~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 314 G-LVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred C-CccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 6 66532 2233345555444 889999999999987543 2 27899999999999999999999864
No 82
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.88 E-value=6.7e-21 Score=219.07 Aligned_cols=297 Identities=13% Similarity=0.025 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHHhhCCCC-cceeecc-chHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCe-EEEEe
Q 001990 210 LESLLNFQTMIADLTGLPM-SNASLLD-EGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVVS 286 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~-~~~sl~~-~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi-~v~~~ 286 (985)
.+.+.+.++.+++++|++. ..+.++. ++|.++++++.++ +. +++.+++..++|++....+ .++..|+ +++.+
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~--~~~~~vi~~g~f~~~~~~~--~~~~~g~~~v~~~ 121 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG--ARRVDHLAWESFGSKWATD--VVKQLKLEDPRVL 121 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC--CCcceEEEeCHHHHHHHHH--HHhhcCCCCceEe
Confidence 4778889999999999854 4677775 8999999988765 32 3333444468998865431 1245677 77776
Q ss_pred Cch-----hhhccCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccc
Q 001990 287 DLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRF 359 (985)
Q Consensus 287 ~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~l 359 (985)
+.+ ++++++. ++.|.+++ .|.+|.+.|+++|++ |++|++++||+ ..++|..+-.-+ .+|++++++ |+|
T Consensus 122 ~~~~g~~~d~~~i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa-~qs~G~~pidv~-~iD~~~~s~~K~l 196 (378)
T PRK03080 122 EADYGSLPDLSAVDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA-TSAAFALPLDWS-KLDVYTFSWQKVL 196 (378)
T ss_pred ccCCCCCCCHhhcCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec-ccccccCCCCHH-HCcEEEEehhhhC
Confidence 542 2222333 55677776 588999999999999 89999999954 346665542212 289999999 666
Q ss_pred cccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccc--ccccccccccCCCccchhHHHHHHHHHHHHH
Q 001990 360 GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYAVY 437 (985)
Q Consensus 360 g~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~t--re~~~rre~atsni~t~~~l~a~~aa~y~~~ 437 (985)
++| ||+|++++++++++++.+...||.. + +.+++.. .....+++.+|.|+....+++++.+++ .+
T Consensus 197 ~~P-----~G~g~l~v~~~~~~~~~p~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al--~~ 263 (378)
T PRK03080 197 GGE-----GGHGMAILSPRAVERLESYTPARPI-----P-KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQL--DW 263 (378)
T ss_pred CCC-----CceEEEEECHHHHHhhhcccCCCCC-----c-hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHH--HH
Confidence 544 6799999999999988776666531 1 1222211 111123466777776667788877777 66
Q ss_pred cCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-C--Cc-ceEEEecCC-----HHHHHHHHHHcCceeee--e--c
Q 001990 438 HGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P--FF-DTVKVKCAD-----AHAIASAAYKIEMNLRV--V--D 503 (985)
Q Consensus 438 ~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~--~~-~~~~i~~~~-----~~~l~~~L~~~Gi~~~~--~--~ 503 (985)
+.++ |++++.+|+.+++++++++|+++++++++.. + .. ..++|+.++ ..++...|.++||.++. . .
T Consensus 264 l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~ 343 (378)
T PRK03080 264 ANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDA 343 (378)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccCC
Confidence 6666 8999999999999999999999975777631 2 22 246666653 34567777777887643 1 2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 504 SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 504 ~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+.+|+|++.+||++||++++++|+.
T Consensus 344 ~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 344 PNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999974
No 83
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=4.7e-20 Score=212.14 Aligned_cols=343 Identities=15% Similarity=0.192 Sum_probs=224.1
Q ss_pred CHHHHHHHHHHHHcCCCcc---ceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhC
Q 001990 149 TESQMIEHMQKLASMNKVY---KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG 225 (985)
Q Consensus 149 se~e~~~~~~~~~~~n~~~---~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g 225 (985)
||.|++..+.++-+....+ ..++..+.+| .|.+.. .+.. ++..+ ...+....|..+...++++.+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-a~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g 73 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNP--HPIAVK-AYDM---FIETN-LGDPGLFPGTKKIEEEVVGSLGNLLH 73 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCc--hHHHHH-HHHH---HhhcC-CCCcccCccHHHHHHHHHHHHHHHhC
Confidence 6899999999986555433 2244444443 333221 2111 11111 11112224556777889999999999
Q ss_pred CCCcceeeccchHHHHHHHHHHhhh--h-cCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-
Q 001990 226 LPMSNASLLDEGTAAAEAMAMCNNI--Q-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 293 (985)
Q Consensus 226 ~~~~~~sl~~~~ta~~ea~~~a~~~--~-~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~- 293 (985)
++..++.++.|+|.+...++.++.. . .+++++|++++..|+++...++ ..|++++.++. +++++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~----~~G~~~~~v~~~~~~~~d~~~l~~~ 149 (373)
T TIGR03812 74 LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE----MLGLELRYAPLDEDYTVDVKDVEDL 149 (373)
T ss_pred CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH----HcCCeEEEEeeCCCCCcCHHHHHHH
Confidence 9988888888988776655444321 1 1256899999999998777653 45888877753 34555
Q ss_pred cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-------C----CCCcccceEEEecCccccc
Q 001990 294 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-------K----PPGELGADIVVGSAQRFGV 361 (985)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-------~----~p~~~GaDi~v~s~k~lg~ 361 (985)
+++++.++++..| |++|.+.|+++|+++||++|++++||. .++.+.+ . .....|+|.+..++++|+.
T Consensus 150 l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~-a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~ 228 (373)
T TIGR03812 150 IDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA-AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL 228 (373)
T ss_pred HhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc-CchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC
Confidence 6666655554444 689999999999999999999999953 2221111 0 1123589999889855542
Q ss_pred -cCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCc
Q 001990 362 -PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 440 (985)
Q Consensus 362 -P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~ 440 (985)
|. |..|+++.++++++.+... .+ |.. . .+ + ....||.|. ....++.++ +.+++.
T Consensus 229 ~~~----~~G~~~~~~~~~~~~l~~~----------~~-~~~-~-~~-~--~~~~gt~~~---~~~~~~~~~--l~~l~~ 283 (373)
T TIGR03812 229 SPI----PAGGILFRSKSYLKYLSVD----------AP-YLT-V-KK-Q--ATITGTRSG---ASAAATYAV--IKYLGR 283 (373)
T ss_pred CcC----CceEEEEeCHHHHhhhccc----------Cc-ccC-C-CC-C--cceEeechh---HHHHHHHHH--HHHhCH
Confidence 32 3335666777777665210 00 100 0 00 0 001234443 223333333 477888
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCCHHHHHHHHHHcCceeeee-cCCeEEEEeccCCCHHH
Q 001990 441 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTTLED 519 (985)
Q Consensus 441 ~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~L~~~Gi~~~~~-~~~~lris~~~~~t~ed 519 (985)
+|++++.+++.+++++|+++|+++| ++.+..+..+.+.+..++..++.++|.++||.++.. .+..+|+|++.++|++|
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~ed 362 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKIG-FEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREH 362 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHH
Confidence 9999999999999999999999997 654423444556676666678999999999998764 35789999999999999
Q ss_pred HHHHHHHHhC
Q 001990 520 VDKLFIVFAG 529 (985)
Q Consensus 520 id~ll~~l~~ 529 (985)
+++++++|..
T Consensus 363 id~l~~~L~~ 372 (373)
T TIGR03812 363 IEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHhh
Confidence 9999999963
No 84
>PRK14012 cysteine desulfurase; Provisional
Probab=99.88 E-value=1.9e-20 Score=217.74 Aligned_cols=310 Identities=12% Similarity=0.118 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHhCCCcc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH---HhcCcEEEEE
Q 001990 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSV 707 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~---~~~G~~v~~v 707 (985)
+.++++++.+++++|.+.. .++.++|++++..++.++..+. ..++++||++...|.++...+ +..|++++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~----~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v 124 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFY----QKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhh----cCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE
Confidence 5678899999999999764 3556667766644444432211 135688999988787664443 3469999999
Q ss_pred eCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcE
Q 001990 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (985)
Q Consensus 708 ~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di 786 (985)
+.+++|.+|+++|+++|+ +++++|+++++ |++|.+. |+++|.++||++|+++++|++|+.+...+ ....+++|+
T Consensus 125 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~vivD~a~~~g~~~~-~~~~~~~D~ 199 (404)
T PRK14012 125 DPQSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERGIIFHVDAAQSVGKVPI-DLSKLKVDL 199 (404)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchh-hHHHHHHHHHHcCCEEEEEcchhcCCccc-CcccCCCCE
Confidence 998889999999999997 78999999987 5799998 89999999999999999999997544332 344678999
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+++++||.+ |++|.|+++++++....+.....|... .++.+.+|.++.. ...+.+|...+ ..
T Consensus 200 ~~~s~~K~~------gp~g~G~l~~~~~~~~~~~~~~~g~~~---~~~~~~gt~~~~~-----~~~l~~al~~~----~~ 261 (404)
T PRK14012 200 MSFSAHKIY------GPKGIGALYVRRKPRVRLEAQMHGGGH---ERGMRSGTLPTHQ-----IVGMGEAARIA----KE 261 (404)
T ss_pred EEEehhhcc------CCCceEEEEEecCCCCCCCceecCCCc---cCCccCCCcCHHH-----HHHHHHHHHHH----Hh
Confidence 999999965 223678998887643333222222110 0111233333321 11122222222 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeEcCC-CCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-------
Q 001990 867 GLTEASKIAILNANYMAKRLEKHYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS------- 938 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~-~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~------- 938 (985)
++.+..++...+++++.+.|++...+...++ .....+.+.+.+. ..+..++...|.+.+|..+...
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFN------YVEGESLIMALKDLAVSSGSACTSASLEP 335 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEe------CcCHHHHHHhCCCeEEEchhhhCCCCCCC
Confidence 3445566777888899998876333322221 1111122233332 1234567777754333221100
Q ss_pred ------CC-----CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 939 ------WP-----VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 939 ------~p-----v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.| ..+.||++++.++|++|+| +++++|+++.+.++.
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd---~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEID---YAIELVRKSIGKLRE 382 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHH---HHHHHHHHHHHHHHh
Confidence 01 1378999999999999999 999999998877643
No 85
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.88 E-value=3.1e-21 Score=213.16 Aligned_cols=172 Identities=20% Similarity=0.331 Sum_probs=141.5
Q ss_pred cHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH---HhcCcEEE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIV 705 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~---~~~G~~v~ 705 (985)
.....+++.++.+|+++|+++..+.+++|++ ++++++++.+....+.+.+.+||+...+|++.-.++ +..|++|+
T Consensus 82 ~~~~~~E~aR~~VAklInAd~~dIiFts~AT--Es~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt 159 (428)
T KOG1549|consen 82 KAEDAVEAAREQVAKLINADPSDIVFTSGAT--ESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVT 159 (428)
T ss_pred hhhHHHHHHHHHHHHHhCCCCCcEEEeCCch--HHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEE
Confidence 3444588999999999999986666666654 366777777654333212227888999998876553 56899999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCC
Q 001990 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (985)
Q Consensus 706 ~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~ 784 (985)
.+|++.+|.+|++.+++.|+ ++|++|.+...| ..|+.+ |++||+++|++.|+.+|+|+||+.|...+ +..++++
T Consensus 160 ~lpv~~~~~~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~-Pv~EI~~icr~~~v~v~~DaAQavG~i~v-DV~eln~ 234 (428)
T KOG1549|consen 160 YLPVEDSGLVDISKLREAIR---SKTRLVSIMHVNNEIGVLQ-PVKEIVKICREEGVQVHVDAAQAVGKIPV-DVQELNA 234 (428)
T ss_pred EeccCccccccHHHHHHhcC---CCceEEEEEecccCccccc-cHHHHHHHhCcCCcEEEeehhhhcCCccc-cHHHcCc
Confidence 99999889999999999998 899999998874 699999 89999999999999999999998777654 5678999
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~ 813 (985)
|++++++|||| |.||+|++|+++
T Consensus 235 D~~s~s~HK~y------gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 235 DFLSISAHKIY------GPPGIGALYVRR 257 (428)
T ss_pred hheeeeccccc------CCCcceEEEEcc
Confidence 99999999998 456799999996
No 86
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=2.1e-20 Score=215.96 Aligned_cols=307 Identities=14% Similarity=0.106 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeC--C
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--D 710 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~--~ 710 (985)
.+.++++.+|+++|++.+ ++++++++|+.+++.++. .++++|+++...|.+....++..|++++.+++ +
T Consensus 64 ~~~~l~~~lA~~~g~~~~-~~~~g~t~a~~~al~~l~--------~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 134 (387)
T PRK09331 64 PIADFHEDLAEFLGMDEA-RVTHGAREGKFAVMHSLC--------KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGY 134 (387)
T ss_pred HHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccC
Confidence 477899999999999875 446677766654444331 36789999998887766667889999999998 6
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCc
Q 001990 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~----~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~D 785 (985)
+++.+|+++++++++++ .+++++|++++|+ .+|.+. |+++|+++||++|++++||++|+.+..++ ....+|+|
T Consensus 135 ~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~-~l~~I~~la~~~g~~livD~a~~~g~~~~-~~~~~g~D 212 (387)
T PRK09331 135 PEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA-DAKKVAKVAHEYGIPFLLNGAYTVGRMPV-DGKKLGAD 212 (387)
T ss_pred cCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCcccCCcCC-CHHHcCCC
Confidence 67889999999999742 2478999999996 599998 89999999999999999999997554333 23467899
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
++++++||+|+ +++|+|++++++++++.+.......... .... .++ +... .+ +..+++.+..+..
T Consensus 213 ~~~~s~~K~l~-----~~~~~G~l~~~~~~i~~~~~~~~~~~~~--~~~~-~~~-~~~~----~~--~~~~~aal~~~~~ 277 (387)
T PRK09331 213 FIVGSGHKSMA-----ASAPSGVLATTEEYADKVFRTSRKFGVK--EVEL-LGC-TLRG----AP--LVTLMASFPHVVE 277 (387)
T ss_pred EEEeeCccccc-----CCCCEEEEEECHHHHhhcccccCCCccc--ceee-ece-ecCc----hH--HHHHHHHHHHHHH
Confidence 99999999995 3457899999987665542210000000 0000 000 0110 01 1111222222211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCc---cccCCCCHHHHHHHHHHCCCccCCCCCC
Q 001990 866 KGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGL---KNTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (985)
Q Consensus 866 ~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~---~~~~g~~~~~l~~~L~e~Gi~~~~~~~p 940 (985)
. + +..++...+++++++.|++ ++++...++. ..+.+.++.+.+ ....+.++.++.+.|.++||..-. +
T Consensus 278 ~-~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~ 350 (387)
T PRK09331 278 R-V-KRWDEEVKKARWFVDELEKIEGFKQLGEKPR--NHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK---P 350 (387)
T ss_pred H-H-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcC--cCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc---c
Confidence 1 1 2334556778899999986 3444311111 111222333211 001123456799999999998321 1
Q ss_pred CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 941 VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 941 v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
..+.++...+..+|++|++ +++++|+++.++.
T Consensus 351 ~~~~i~ri~~~g~t~~di~---~l~~aL~~i~~~~ 382 (387)
T PRK09331 351 GATKEFKLSTYGLTWEQVE---YVADAFKEIAEKY 382 (387)
T ss_pred CCceEEEEEeccCCHHHHH---HHHHHHHHHHHhc
Confidence 1244555455568999999 9999999987753
No 87
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=3.4e-20 Score=212.95 Aligned_cols=318 Identities=12% Similarity=0.130 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHHhCCCc--c-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-CCCCc-HHHHHhcCcEE
Q 001990 630 YQEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTN-PATAAMCGMKI 704 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~--~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~-~Hg~~-~~~~~~~G~~v 704 (985)
+.+...++++.+++++|.+. . .+++++|+.|..+++.++. .++++|++... .++.. ...++..|+++
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~ 106 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH 106 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE
Confidence 33568899999999999864 2 3466777777655444332 25567777543 22221 13457789999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.++.++++.+|+++++++++++ +++++|++++|+ .+|... |+++|+++||++|+++++|++|..+...+ +...++
T Consensus 107 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~~livDa~~~~g~~~~-~~~~~~ 183 (368)
T PRK13479 107 VVLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILN-PLDEIAAVAKRHGKRLIVDAMSSFGAIPI-DIAELG 183 (368)
T ss_pred EEEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCcccccc-CHHHHHHHHHHcCCEEEEEcccccCCccc-cccccC
Confidence 99999877889999999999743 467788899984 699998 89999999999999999998875443222 334678
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC---CCCCCCCCCCCcccccchhhhHHHHHHHHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~---~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l 860 (985)
+|++++++|||++ |+||+|++++++++.+.+......+..+. .......+......+ . ..+.+..+.+
T Consensus 184 ~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~---~-~~~~~l~~al 254 (368)
T PRK13479 184 IDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP---T-HVVAAFYQAL 254 (368)
T ss_pred ceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc---H-HHHHHHHHHH
Confidence 9999999999984 45688999999876655432211100000 000000000000111 1 1112223344
Q ss_pred HHhchh-hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCC-CCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC
Q 001990 861 AMMGSK-GLTEASKIAILNANYMAKRLEK-HYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (985)
Q Consensus 861 ~~lg~~-gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~-~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~ 937 (985)
..+..+ ++.+..++...+++++++.|++ ++.+...+. ..+. .+.+.+.. ..+.+..++.+.|.++||.+...
T Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 255 LELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPI--IVTFHAPA---DPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCce--EEEEECCC---CCCcCHHHHHHHHHHCCEEEecC
Confidence 444333 4666677888889999999987 555432210 0111 12222221 11246788999999999998532
Q ss_pred CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 938 SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 938 ~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
..+..+.+|++...++|++|++ +++++|+++++++
T Consensus 330 ~~~~~~~iRis~~~~~t~edi~---~~l~~L~~~l~~~ 364 (368)
T PRK13479 330 KLTQVDTFRIGCIGDVDAADIR---RLVAAIAEALYWM 364 (368)
T ss_pred CCCCCCEEEEecCCCCCHHHHH---HHHHHHHHHHHHc
Confidence 2111368999987789999999 9999999987754
No 88
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=3.2e-20 Score=211.80 Aligned_cols=314 Identities=12% Similarity=0.120 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcc--c-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCC-cHHHHHhcCcEE
Q 001990 630 YQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGT-NPATAAMCGMKI 704 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~~--~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~-~~~~~~~~G~~v 704 (985)
+.+...++++.+++++|++.. . ++.++|+++...++.++. .+++++|+ ....|+. ....++..|+++
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~ 100 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGKLLVLINGAYGERLAKICEYLGIPH 100 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCeEEEECCCchhhHHHHHHHHcCCce
Confidence 346788999999999999753 2 345667766644443321 24556554 4444443 234466789999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.++.++++.+|+++++++++++ ++++.|+++++ |.+|.+. |+++|+++|+++|+++++|+++..+...+ ....++
T Consensus 101 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~livD~~~s~g~~~~-~~~~~~ 177 (355)
T TIGR03301 101 TDLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILN-PLEAIAKVARSHGAVLIVDAMSSFGAIPI-DIEELD 177 (355)
T ss_pred EEEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchh-HHHHHHHHHHHcCCEEEEEeccccCCccc-chhhcC
Confidence 99998777899999999999753 56677777776 5689998 89999999999999999999876443222 334678
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC---CCC-CCCCCCCCcccccchhhhHHHHHHHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAP-EKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~---~~~-~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
+|++++++||||+ |+||+|++++++++++.+.+.......+. ..+ .+...+.... +.....++.+.
T Consensus 178 ~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-----~~~~~~a~~~a 247 (355)
T TIGR03301 178 VDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTP-----PTHTVYAFAQA 247 (355)
T ss_pred ccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCC-----cHHHHHHHHHH
Confidence 9999999999984 45789999999876654432110000000 000 0000011111 11222233445
Q ss_pred HHHhchhh-HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC
Q 001990 860 IAMMGSKG-LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (985)
Q Consensus 860 l~~lg~~g-l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~ 937 (985)
+..+..+| +.+..++..++++++++.|++ ++++..+....... .+.+.++. ....+..++.++|.++||.+...
T Consensus 248 l~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~l~~~gi~i~~~ 323 (355)
T TIGR03301 248 LEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI-IVSFLYPD---DPDFDFDDFYQELKERGFVIYPG 323 (355)
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc-EEEEECCC---CCcchHHHHHHHHHHCCEEEECC
Confidence 55555555 777777888889999999987 55543221101111 12333321 01135578999999999997543
Q ss_pred CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 938 SWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 938 ~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
.....+.+||+++..+|++|++ +++++|+++
T Consensus 324 ~~~~~~~iRis~~~~~~~~~i~---~~~~~l~~~ 354 (355)
T TIGR03301 324 KLTLADTFRIGTIGEIDAADIE---RLLEAIKDA 354 (355)
T ss_pred ccccccEEEEecCCCCCHHHHH---HHHHHHHhh
Confidence 3222378999998889999999 999999865
No 89
>PLN02271 serine hydroxymethyltransferase
Probab=99.86 E-value=4.8e-20 Score=211.87 Aligned_cols=311 Identities=15% Similarity=0.111 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHhCCCc----cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH---------HH
Q 001990 632 EMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---------AA 698 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~----~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~---------~~ 698 (985)
++..-+.+...++||++. +++++.||+.|+.++++++. .++|+|+..+..||.|-.. +.
T Consensus 194 ~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs 265 (586)
T PLN02271 194 QIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVS 265 (586)
T ss_pred HHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccccc
Confidence 334445678888999887 78999999999987777663 5889999988888866432 23
Q ss_pred hcCcEEEEEe--CC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccC
Q 001990 699 MCGMKIVSVG--TD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 775 (985)
Q Consensus 699 ~~G~~v~~v~--~~-~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g 775 (985)
..|+.+..++ +| ++|.+|++++++.+.. .++++|++....+. ... |+++|+++|+++|+++++|++|..|+..
T Consensus 266 ~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Sayp-r~~-D~~~i~eIAdevGA~LmvD~AH~aGLIa 341 (586)
T PLN02271 266 GASIFFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYP-REW-DYARFRQIADKCGAVLMCDMAHISGLVA 341 (586)
T ss_pred cccceEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhcc-CcC-CHHHHHHHHHHcCCEEEEECcccccccc
Confidence 4565555555 54 4589999999985432 78888888654433 223 7999999999999999999999877653
Q ss_pred CC---CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCC----CCCC-CCCcccccc
Q 001990 776 LT---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE----KSQP-LGTIAAAPW 847 (985)
Q Consensus 776 ~~---~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~----~~~~-t~~i~s~~~ 847 (985)
.. .|. .++|++++++|||| .||.+|+++++++..+...+...++..+...+. ...+ .+...+.+.
T Consensus 342 ~g~~~sP~-~~aDvvt~TTHKtL------rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGph 414 (586)
T PLN02271 342 AKECVNPF-DYCDIVTSTTHKSL------RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPH 414 (586)
T ss_pred cCcCCCCC-cCCcEEEeCCcccC------CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChh
Confidence 32 333 36999999999999 578778899887765555444333322210000 0011 122222222
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHH
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~ 926 (985)
.+. +++.| +.+.......++++++++.+|++.|++.|.+ |+.++..+ +..|.+.+|++. .|+++..+.+.
T Consensus 415 n~~-IAalA-valkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~gg---TdnHlvLvDl~~----~g~~G~~ae~~ 485 (586)
T PLN02271 415 NNH-IAALA-IALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGG---TDNHLLLWDLTT----LGLTGKNYEKV 485 (586)
T ss_pred HHH-HHHHH-HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCC---CCcceeeecCcc----cCCCHHHHHHH
Confidence 122 22222 2334444455788999999999999999987 89987643 345778899863 36788899999
Q ss_pred HHHCCCccCCCC--C---C-CCCEEEEeccCC----CCHHhhchHHHHHHHHHHHHH
Q 001990 927 LMDYGFHGPTMS--W---P-VPGTLMIEPTES----ESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 927 L~e~Gi~~~~~~--~---p-v~~~lris~t~~----~t~eeId~~~~~i~aL~~i~~ 973 (985)
|.+.||.++... + | .++.|||-..+. -.++|++ +..+.+.++++
T Consensus 486 Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~---~iA~~i~~~~~ 539 (586)
T PLN02271 486 CEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFE---TIADFLLRAAQ 539 (586)
T ss_pred HHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHH---HHHHHHHHHHh
Confidence 999999875321 1 1 357799876554 3457777 66666666554
No 90
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.86 E-value=5.1e-20 Score=210.54 Aligned_cols=315 Identities=17% Similarity=0.112 Sum_probs=216.2
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcc-eeeccchHHHHHHHHHHhhhhcCCCCE
Q 001990 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCNNIQKGKKKT 257 (985)
Q Consensus 179 ~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~-~sl~~~~ta~~ea~~~a~~~~~~~g~~ 257 (985)
.+|+.+.+++.... ..+ + +.+..+.+.++++.+++++|.+..+ +.++.++|.++..++.++ .. +|++
T Consensus 9 ~~~~~v~~a~~~~~---~~~--~----~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~-~~--~g~~ 76 (356)
T cd06451 9 NVPPRVLKAMNRPM---LGH--R----SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL-LE--PGDK 76 (356)
T ss_pred CCCHHHHHHhCCCc---cCC--C----CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh-CC--CCCE
Confidence 47777765553321 111 1 2234567888999999999996544 556777787766665554 23 7899
Q ss_pred EEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCC
Q 001990 258 FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG 326 (985)
Q Consensus 258 Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g 326 (985)
||++...|++.. +...++..|.+++.++. +++++ +++ ++++|++++| |.+|.+.|+++|+++||++|
T Consensus 77 vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~ 154 (356)
T cd06451 77 VLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHD 154 (356)
T ss_pred EEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcC
Confidence 999988887631 11223446777777643 45555 665 8999999887 67999999999999999999
Q ss_pred cEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCC--ceeeeeecCCCCcceEE
Q 001990 327 VKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG--RIVGVSIDSSGKPALRV 402 (985)
Q Consensus 327 alliV~a~~~alg~l-~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~--~~vG~s~d~~g~~~~~l 402 (985)
+++++|+ .+++|.. .+..++|+|++++++ |+|++| +|+|++++++++++.+.. ...+ +.+
T Consensus 155 ~~li~D~-~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~----------~~~ 218 (356)
T cd06451 155 ALLIVDA-VSSLGGEPFRMDEWGVDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKG----------FYF 218 (356)
T ss_pred CEEEEee-ehhccCccccccccCccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCc----------eee
Confidence 9999953 4456643 245678999999998 777654 357899999988877642 1111 222
Q ss_pred ecccccccc--c-ccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCcce
Q 001990 403 AMQTREQHI--R-RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDT 477 (985)
Q Consensus 403 ~l~tre~~~--r-re~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~~~ 477 (985)
.++...+.. + .+.+|.++ ..++++.+++ .++..+|++++.++..++++++++.|.++| +++... .+...
T Consensus 219 ~~~~~~~~~~~~~~~~~t~~~---~~~~a~~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~ 292 (356)
T cd06451 219 DLLLLLKYWGEGYSYPHTPPV---NLLYALREAL--DLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRSPT 292 (356)
T ss_pred cHHHHHhhhcccCCCCCCChH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCCc
Confidence 211111111 1 12233332 4455666665 555567899999999999999999999987 888642 22333
Q ss_pred E-EEecC-C--HHHHHHHHHHc-Cceeeee----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 478 V-KVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 478 ~-~i~~~-~--~~~l~~~L~~~-Gi~~~~~----~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+ .+..+ + ..+++++|.++ ||.+... .++.+|+|++.++|++|+++++++|..
T Consensus 293 ~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 293 VTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 3 23443 2 78999999998 9987542 247899999999999999999999963
No 91
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=3e-20 Score=201.13 Aligned_cols=292 Identities=20% Similarity=0.248 Sum_probs=208.9
Q ss_pred HHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH---HHHhcC--cEEEEEeCC
Q 001990 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCG--MKIVSVGTD 710 (985)
Q Consensus 636 el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~---~~~~~G--~~v~~v~~~ 710 (985)
.+.+...+|||++.+++++.||++++.++++|+. +++|+|+-.+..||-|-. .....| ++++..++|
T Consensus 76 laierak~LFga~~anVQPhSGs~AN~av~~All--------~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd 147 (413)
T COG0112 76 LAIERAKKLFGAEYANVQPHSGSQANQAVYLALL--------QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVD 147 (413)
T ss_pred HHHHHHHHHhCCCccccCCCCchHHHHHHHHHHc--------CCCCeEecccCCCCCcccCCCCCCccceeEEeEecccc
Confidence 3467888999999999999999999988888765 588999987777775532 222333 577777888
Q ss_pred C-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccc---cCCCCCCcCCCcE
Q 001990 711 A-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSPGYIGADV 786 (985)
Q Consensus 711 ~-~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~---~g~~~~g~~g~Di 786 (985)
+ ++.+|.|++++.+.+++|+ +|+.....+.-.+ |+++++++|++.|++|.+|.||..|+ +.+.+|-.. +|+
T Consensus 148 ~et~~IDyD~~~k~a~e~kPK--~ii~G~SaY~r~i--d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-Adv 222 (413)
T COG0112 148 PETGLIDYDEVEKLAKEVKPK--LIIAGGSAYSRPI--DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADV 222 (413)
T ss_pred cccCccCHHHHHHHHHHhCCC--EEEECcccccccc--CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cce
Confidence 4 4999999999999876554 4555443444444 79999999999999999999997655 234556555 999
Q ss_pred EEeCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
++.+.|||| .||++|++.+++ ++...+...++.+ +.+++. ...+++.|.++.. ...
T Consensus 223 VTtTTHKTl------rGPrGG~Il~~~eel~kkin~aVFPg---------------~qggpl-~HviAakaVa~~E-al~ 279 (413)
T COG0112 223 VTTTTHKTL------RGPRGGIILTNDEELAKKINSAVFPG---------------LQGGPL-MHVIAAKAVAFKE-ALE 279 (413)
T ss_pred EeCCcccCC------CCCCceEEEeccHHHHHHhhhhcCCc---------------cCCChH-HHHHHHHHHHHHH-HcC
Confidence 999999998 689999999995 6766654322211 111111 1123344444433 445
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC--CCC---
Q 001990 866 KGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT--MSW--- 939 (985)
Q Consensus 866 ~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~--~~~--- 939 (985)
.++++..++...|++.|++.|.+ |+.++.. ++..|.+++|+++ .+.++.+..+.|.+.||.++. +.|
T Consensus 280 p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsG---gTdnHl~lVDl~~----~~~~Gk~ae~~L~~~~It~NKN~iP~D~~ 352 (413)
T COG0112 280 PEFKEYAKQVVKNAKALAEALKERGFKVVSG---GTDNHLVLVDLRS----KGLTGKKAEAALERAGITVNKNAIPFDPE 352 (413)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCeEecC---CccceEEEEEccc----CCCCHHHHHHHHHHcCEeeccCCCCCCCC
Confidence 67899999999999999999987 8888653 3556788999872 367889999999999998753 211
Q ss_pred -C-CCCEEEEeccCCC----CHHhhchHHHHHHHHHHHHH
Q 001990 940 -P-VPGTLMIEPTESE----SKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 940 -p-v~~~lris~t~~~----t~eeId~~~~~i~aL~~i~~ 973 (985)
| ++..|||-....+ .++|+. +..+.+.+++.
T Consensus 353 ~p~~tSGIRiGtpa~TtrG~~e~e~~---~Ia~~I~~vl~ 389 (413)
T COG0112 353 SPFVTSGIRIGTPAVTTRGFGEAEME---EIADLIADVLD 389 (413)
T ss_pred CCCCCccceeccHHHhhcCCCHHHHH---HHHHHHHHHHh
Confidence 2 4577998765543 456666 66555555543
No 92
>PRK02769 histidine decarboxylase; Provisional
Probab=99.86 E-value=2.8e-19 Score=204.18 Aligned_cols=283 Identities=18% Similarity=0.144 Sum_probs=199.4
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcc--eeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 207 QGRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~~--~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
+++.+...+..+++|+|+|+++.. ..+++|||.+....+.+.+ .+.++++|++++.+|+|+.+.++.+ |++.+
T Consensus 61 ~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar-~~~~~~~ii~s~~~H~Sv~ka~~~l----g~~~~ 135 (380)
T PRK02769 61 LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAR-ELFPDGTLYYSKDTHYSVSKIARLL----RIKSR 135 (380)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHH-HhCCCcEEEeCCCceehHHHHHHHc----CCCCc
Confidence 356778889999999999997543 4677888855332222211 1126789999999999999998653 33333
Q ss_pred Ee--------Cchhhhc-cCCC---EeEEEEEcC-CCCeeeccHHHHHHHHHhCC---cEEEEEeccccccCCC------
Q 001990 285 VS--------DLKDIDY-KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANG---VKVVMATDLLALTILK------ 342 (985)
Q Consensus 285 ~~--------~~~~l~~-l~~~---t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g---alliV~a~~~alg~l~------ 342 (985)
.+ |+++|++ ++++ |.+|+++++ |.+|.++|+++|+++||++| ++++||+ .++.+.++
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDa-A~gg~~~p~~~~~~ 214 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA-ALSGMILPFVNNPP 214 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEe-cccceeecccCccc
Confidence 33 3356666 6555 899999987 57999999999999999998 6999954 22333331
Q ss_pred -CCCcccceEEEecCccc-cccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCc
Q 001990 343 -PPGELGADIVVGSAQRF-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (985)
Q Consensus 343 -~p~~~GaDi~v~s~k~l-g~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni 420 (985)
-....|+|.++.++++| ++|+ ++|++++++++.+.+... .. | +. ..+. -..||.|.
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~-~~----------y-l~--~~d~---t~~GSR~g 272 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVD-VD----------Y-IG--SRDQ---TISGSRNG 272 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccC-cc----------c-cC--CCCC---CccCCCCc
Confidence 11233999999999444 4464 468899998877766421 00 1 00 0000 12455555
Q ss_pred cchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCCHHHHHHHHHHcCceee
Q 001990 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLR 500 (985)
Q Consensus 421 ~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~L~~~Gi~~~ 500 (985)
.+ ..++-++ +.++|.+|++++.+++.++++|+.++|++.| ++++..|...+|+|..+.. ++. +|+.+.
T Consensus 273 ~~---~l~lw~a--L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p~~~~v~f~~~~~-~~~-----~~w~l~ 340 (380)
T PRK02769 273 HT---ALLLWAA--IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNPNSITVVFPCPSE-RIW-----KKWHLA 340 (380)
T ss_pred HH---HHHHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCceEEEEcCCCH-HHH-----hCeeEc
Confidence 32 2233333 4789999999999999999999999999987 9988777777888876642 221 678876
Q ss_pred eecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 501 VVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 501 ~~~~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
.. ++.++++++..+|++.+|+|++.|...
T Consensus 341 ~~-~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 341 TS-GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred cc-CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 64 468999999999999999999999854
No 93
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=3.5e-19 Score=198.34 Aligned_cols=318 Identities=14% Similarity=0.159 Sum_probs=223.5
Q ss_pred cHHHHHHHHHHHHHHHhCCCc--cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCc
Q 001990 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~--~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~ 702 (985)
-+.+++.++.+.+..+++.+. +.+..+||+.|.++++..+. .++++||+..+ |.|. ..++..|.
T Consensus 35 ~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkVLv~~n--G~FG~R~~~ia~~~g~ 104 (383)
T COG0075 35 DFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKVLVVVN--GKFGERFAEIAERYGA 104 (383)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--ChHHHHHHHHHHHhCC
Confidence 455678899999999999883 45677888888877765442 47889998654 4443 33678999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCc
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~ 781 (985)
+++.+...+.-.+|+++++++|+++ ++.++|.+++. +.+|+.. |+++|+++|++||++++||++.+.|-..+ .+.+
T Consensus 105 ~v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvln-pl~~I~~~~k~~g~l~iVDaVsS~Gg~~~-~vd~ 181 (383)
T COG0075 105 EVVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLN-PLKEIAKAAKEHGALLIVDAVSSLGGEPL-KVDE 181 (383)
T ss_pred ceEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccC-cHHHHHHHHHHcCCEEEEEecccCCCccc-chhh
Confidence 9999998877789999999999854 67778888886 5699999 89999999999999999999875443333 5678
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCcc-ccCCCC-----CC-C-CCCCCCCCcccccchhhhHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGI-----PA-P-EKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~-g~~~~~-----~~-~-~~~~~t~~i~s~~~g~~~~~ 853 (985)
||+|+++.+.+|.|+.| ||+|++.++++..+.+..+-. +++.|. .. . +....|+++. .+
T Consensus 182 wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~--------~i 248 (383)
T COG0075 182 WGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVN--------LI 248 (383)
T ss_pred cCccEEEecCchhccCC-----CccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHH--------HH
Confidence 99999999999999644 799999999865544432210 111111 00 0 0011222222 12
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCC
Q 001990 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (985)
Q Consensus 854 ~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~G 931 (985)
.+-..+++.+-.+|+.++.+++..+++++++.++. |+++.. .+.........+..+ .|++..++...|. ++|
T Consensus 249 ~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P-----~g~~~~~~~~~~~~~~g 322 (383)
T COG0075 249 YALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVP-----EGVDDKKVRRALLKEYG 322 (383)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECC-----CCCCcHHHHHHHHHhCC
Confidence 22345677888899999999999999999999997 777654 111111112233333 3666555555555 458
Q ss_pred CccCCCCCCCC-CEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHccCC
Q 001990 932 FHGPTMSWPVP-GTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAGRV 981 (985)
Q Consensus 932 i~~~~~~~pv~-~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~~~ 981 (985)
+.+.....|+. ..+||.-.-.-+.+|+. ..+.+|..++.++......
T Consensus 323 ~~i~gg~~~l~gkifRIGhMG~~~~~dv~---~~l~ale~~L~~~g~~~~~ 370 (383)
T COG0075 323 VEIAGGQGPLKGKIFRIGHMGNVRPEDVL---AALAALEAALRELGVKVEA 370 (383)
T ss_pred EEecccccccCccEEEEecCccCCHHHHH---HHHHHHHHHHHHcCCcccc
Confidence 88755444444 57899877778999999 9999999998876543333
No 94
>PRK14012 cysteine desulfurase; Provisional
Probab=99.85 E-value=4.3e-19 Score=206.40 Aligned_cols=290 Identities=15% Similarity=0.138 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhh-hhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc
Q 001990 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~-~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~ 288 (985)
-+.+.++++.+|+++|.++.++.+.+|+|.++..++.++. ...++||+||+++.+|+++...++.+ +..|++++.++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc
Confidence 3668889999999999988888899999988777665542 11237899999999999999888764 346888888754
Q ss_pred --------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001990 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (985)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k 357 (985)
+++++ +++++++|+++++ |.+|.+.|+++|.++||++|+++++|+ ..+.|... +..++++|+++++++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDA-AQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEc-chhcCCcccCcccCCCCEEEEehh
Confidence 35666 7888999999886 789999999999999999999999953 34566543 456789999999994
Q ss_pred cccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001990 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (985)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~ 437 (985)
++.+| +|.|+++++++...++.+...|.. . ..+.+.||.|+ ..+.++.+++-+.
T Consensus 206 K~~gp-----~g~G~l~~~~~~~~~~~~~~~g~~------~-----------~~~~~~gt~~~---~~~~~l~~al~~~- 259 (404)
T PRK14012 206 KIYGP-----KGIGALYVRRKPRVRLEAQMHGGG------H-----------ERGMRSGTLPT---HQIVGMGEAARIA- 259 (404)
T ss_pred hccCC-----CceEEEEEecCCCCCCCceecCCC------c-----------cCCccCCCcCH---HHHHHHHHHHHHH-
Confidence 45333 257899998765444433333311 0 01234577776 3455555665222
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-C-C-cce--EEEecCCHHHHHHHHHHcCceee----e-------
Q 001990 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P-F-FDT--VKVKCADAHAIASAAYKIEMNLR----V------- 501 (985)
Q Consensus 438 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~-~-~~~--~~i~~~~~~~l~~~L~~~Gi~~~----~------- 501 (985)
..+++++.++..++++++.+.|+++.++++.+. + . ... +.+...+..++.+.|.+.+|... .
T Consensus 260 --~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~ 337 (404)
T PRK14012 260 --KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSY 337 (404)
T ss_pred --HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCH
Confidence 235677889999999999999998754776532 1 1 122 44443335567777754333210 0
Q ss_pred ----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 502 ----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 ----------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
...+.+|+|++.++|++|+|+++++|+.
T Consensus 338 ~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 338 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 1147899999999999999999999974
No 95
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.85 E-value=2.2e-19 Score=204.90 Aligned_cols=327 Identities=13% Similarity=0.017 Sum_probs=221.5
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccc-cCCChhhHhhHHHHHHHHHHHHHHHhhCCCCc-ceeec-cchHHHHHHHHHHh
Q 001990 172 GMGYYNTHVPPVILRNIMENPAWYTQ-YTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLL-DEGTAAAEAMAMCN 248 (985)
Q Consensus 172 G~g~~~~~~p~~v~~~i~~~~~~~t~-~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~-~~sl~-~~~ta~~ea~~~a~ 248 (985)
+.| |..+|+.|.+++. .+..-.- .....++. .+.+.+.++.+++|+|++.. ++.++ .+||.++++++.++
T Consensus 8 ~pG--P~~~~~~v~~a~~-~~~~~~~~~~hr~~~f----~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l 80 (361)
T TIGR01366 8 GSG--PSKVRLEQLQALT-TTAASLFGTSHRQAPV----KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL 80 (361)
T ss_pred cCC--CcCCCHHHHHHHH-hcCccccccCcCChHH----HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence 455 5568888875533 2210000 12333343 47788899999999998543 57665 56999999988765
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhhhc-cCCCEeEEEEEc-CCCCeeeccHHHHHHHHH
Q 001990 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAH 323 (985)
Q Consensus 249 ~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l~~-l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~ 323 (985)
- .++.++++.+.|.+....+-.++...+ ++.+++. ++++. ++++++.|++++ +|.+|.+.|+++| +|
T Consensus 81 ~----~~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~ 152 (361)
T TIGR01366 81 I----EKKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EG 152 (361)
T ss_pred c----cccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cc
Confidence 2 224556777888776666544332223 4444443 23443 567899998876 6899999999998 58
Q ss_pred hCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEE
Q 001990 324 ANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 402 (985)
Q Consensus 324 ~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l 402 (985)
++|++++||+ ..++|..+-.-+ .+|++++++ |.|+.| ||++++++|+++++++.+...|.. +.+ +.+
T Consensus 153 ~~g~~~iVDa-vqs~g~~~idv~-~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~----~~p-~~~ 220 (361)
T TIGR01366 153 SDDALVVIDA-TSGAGGLPVDIA-ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGR----WVP-EFL 220 (361)
T ss_pred cCCCeEEEEc-CccccCCCCCHH-HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCC----CCc-hhh
Confidence 9999999954 345554432212 289999999 555533 368889999998888764443310 111 234
Q ss_pred ecccccccccccccCCCccchhHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CC--Cc---
Q 001990 403 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FF--- 475 (985)
Q Consensus 403 ~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~--~~--- 475 (985)
++.... ..+.+.+|.|+.....++++.+++ .++..+ |++.+.+|+.+++++++++|.++++++++. .+ ..
T Consensus 221 d~~~~~-~~~~~~~t~~tp~i~~i~~l~~al--~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v 297 (361)
T TIGR01366 221 SLPTAV-DNSLKNQTYNTPAIATLALLAEQI--DWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVV 297 (361)
T ss_pred hHHHHH-hccccCCCCCCchHHHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccce
Confidence 432221 123456888888778888988887 566566 699999999999999999999997566652 21 11
Q ss_pred ceEEEecCC--HHHHHHHHHHcCceeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 476 DTVKVKCAD--AHAIASAAYKIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 476 ~~~~i~~~~--~~~l~~~L~~~Gi~~~~----~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+|++. ++ ..++.+.|.++||.+.. +.++.+|+|++.+||.+||++|+++|+.
T Consensus 298 ~~v~~~-~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 298 GTIDFV-DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred EEEECC-CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 234552 33 78999999999998743 1246799999999999999999999974
No 96
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.85 E-value=1.3e-18 Score=201.37 Aligned_cols=349 Identities=15% Similarity=0.101 Sum_probs=223.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHcC-CCccceecCCCCCCC-CCcHHHHHHHHhCCcccccc-CCChhhHhhHHHHHHHH
Q 001990 139 MKFSKFDEGLTESQMIEHMQKLASM-NKVYKSFIGMGYYNT-HVPPVILRNIMENPAWYTQY-TPYQAEIAQGRLESLLN 215 (985)
Q Consensus 139 ~~lp~~~~~~se~e~~~~~~~~~~~-n~~~~~~lG~g~~~~-~~p~~v~~~i~~~~~~~t~~-~py~~e~sqg~l~~i~e 215 (985)
..|| +++++..|+++++...--. +..-..|.|. +.+ ..|.+.. .+.+- +-+.+ +|.. +....+.+.+
T Consensus 15 ~~~p--~~~~~~~~~~~~~~~~iyld~~a~~~~~~~--~tt~~~p~~~~-~~~~~--l~~~~~np~s---~~~~~~le~~ 84 (431)
T TIGR01788 15 YRMP--EEEMPPDAAYQLIHDELSLDGNPRLNLATF--VTTWMEPEARK-LMDET--INKNMIDKDE---YPQTAEIENR 84 (431)
T ss_pred ccCC--CCCCCHHHHHHHHHHHhhhcCCcceeeeee--eCCCCCHHHHH-HHHHH--HhcCCCCccc---CccHHHHHHH
Confidence 4677 6889999999999865332 2111122221 111 2444432 33221 11111 3322 2233488889
Q ss_pred HHHHHHHhhCCCC--cce--eeccchHHHHHHHHHHhhhh--c-----C---CCCEEEEcCCCChhHHHHHHHhhcCCCe
Q 001990 216 FQTMIADLTGLPM--SNA--SLLDEGTAAAEAMAMCNNIQ--K-----G---KKKTFIIASNCHPQTIDICITRADGFDI 281 (985)
Q Consensus 216 ~q~~ia~L~g~~~--~~~--sl~~~~ta~~ea~~~a~~~~--~-----~---~g~~Vlv~~~~h~s~~~~~~~~a~~~gi 281 (985)
.++++|+++|++. ..+ .+++|||.+...++.+.+.. . + .+.+|++++.+|+++.+.++. +|+
T Consensus 85 ~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~----lg~ 160 (431)
T TIGR01788 85 CVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY----FDV 160 (431)
T ss_pred HHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----cCc
Confidence 9999999999982 233 34688885544433332211 0 0 124799999999999988753 466
Q ss_pred EEEEeCc---------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC------CcEEEEEe-cccc-----c
Q 001990 282 KVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMAT-DLLA-----L 338 (985)
Q Consensus 282 ~v~~~~~---------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~------galliV~a-~~~a-----l 338 (985)
+++.++. ++|++ ++++|.+|+++.. |.+|.++|+++|+++|+++ |++++||+ +..+ .
T Consensus 161 ~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~ 240 (431)
T TIGR01788 161 ELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVY 240 (431)
T ss_pred eeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhC
Confidence 6666544 34555 7888999999987 5799999999999999999 99999953 3211 1
Q ss_pred cCCC-CCCcccceEEEecCcccc-ccCCCCCCceEEEEEchh--hHhcC--CCceeeeeecCCCCcceEEeccccccccc
Q 001990 339 TILK-PPGELGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (985)
Q Consensus 339 g~l~-~p~~~GaDi~v~s~k~lg-~P~~~GGP~~G~l~~~~~--~~~~l--p~~~vG~s~d~~g~~~~~l~l~tre~~~r 412 (985)
+-+. +....|+|.+..++++|+ +|. |+|+++++++ +.+.+ .+..+|.. ...+.+.. .|
T Consensus 241 ~~~~~~~~~~~~DSis~s~HK~~~~P~-----g~G~l~~r~~~~l~~~~~~~~~yl~~~-----~~~~t~~~------sR 304 (431)
T TIGR01788 241 PDLEWDFRLPRVKSINVSGHKYGLVYP-----GVGWVIWRDEEALPEELIFHVNYLGGD-----EPTFTLNF------SR 304 (431)
T ss_pred CCchhhcCCCCceEEEECchhccCCCC-----CcEEEEEeChHHcchhheecccccCCC-----CCCcceec------Cc
Confidence 1111 113468999999996654 453 5789999875 22322 11122210 00111111 11
Q ss_pred ccccCCCccchhHHHHHHHHHH--HHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcceEEEecC-----C
Q 001990 413 RDKATSNICTAQALLANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA-----D 484 (985)
Q Consensus 413 re~atsni~t~~~l~a~~aa~y--~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~-----~ 484 (985)
+ +.-+ .++| +..+|.+|++++.+++.+++++|.++|++.++++++.+ +.+..++|+.+ +
T Consensus 305 ~-----------g~~a--l~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~ 371 (431)
T TIGR01788 305 P-----------ANQV--IAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPG 371 (431)
T ss_pred h-----------HHHH--HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCC
Confidence 1 1101 1133 47889999999999999999999999999976999865 56777777754 2
Q ss_pred --HHHHHHHHHHcCceeeee-c------CCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 485 --AHAIASAAYKIEMNLRVV-D------SNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 485 --~~~l~~~L~~~Gi~~~~~-~------~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
..++.++|.++||.+... . .-.+|+++....+++.+++|++.|++.
T Consensus 372 ~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~ 426 (431)
T TIGR01788 372 YTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAA 426 (431)
T ss_pred cCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 678999999999975321 1 135899999999999999999999853
No 97
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=4.2e-19 Score=203.54 Aligned_cols=322 Identities=14% Similarity=0.108 Sum_probs=215.3
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCc--ceeeccchHHHHHHHHHHh
Q 001990 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCN 248 (985)
Q Consensus 171 lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~--~~sl~~~~ta~~ea~~~a~ 248 (985)
++.| |..+++.+.++ +.++ | . .+.+ ...+.+.+.++.+++|+|+++. .+.++.++|.++++++.++
T Consensus 7 ~~pg--p~~~~~~v~~~-~~~~-~-~---~~~~----~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l 74 (363)
T TIGR02326 7 LTPG--PLTTSRTVKEA-MLFD-W-C---TWDS----DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA 74 (363)
T ss_pred ecCC--CCCCCHHHHHH-hCCC-C-C---CCCh----HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc
Confidence 3556 56677777643 3332 2 1 2232 2456678889999999999764 5778899999999888775
Q ss_pred hhhcCCCCE-EEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCCeeeccH
Q 001990 249 NIQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (985)
Q Consensus 249 ~~~~~~g~~-Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~dl 315 (985)
. . ++++ |+++...|+.... ..++..|++++.++. +++++ ++ ++++.|.+.++ |++|.+.|+
T Consensus 75 ~-~--~~~~vlv~~~~~~~~~~~---~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i 148 (363)
T TIGR02326 75 V-P--KDGKLLVVINGAYGARIV---QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI 148 (363)
T ss_pred C-C--CCCeEEEEeCChhhHHHH---HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence 3 2 4555 5557778876432 224557888877654 34555 43 35677777664 789999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeec
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d 393 (985)
++|+++||++|++++||+ ..++|... +..+||+|++++++ |+|++ +||+||++++++.++++.+...+
T Consensus 149 ~~I~~l~~~~g~~livD~-~~~~g~~~~~~~~~~~D~~~~s~~K~l~~-----p~G~G~l~~~~~~~~~~~~~~~~---- 218 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVDA-MSSFGGIPIDIAELHIDYLISSANKCIQG-----VPGFGFVIARQAELAACKGNARS---- 218 (363)
T ss_pred HHHHHHHHHcCCEEEEEc-cccccCcccchhhcCccEEEecCcccccc-----CCcceEEEECHHHHHHhhcCCCc----
Confidence 999999999999999953 45666543 34679999999999 76754 46789999999887765332211
Q ss_pred CCCCcceEEeccccccccccccc-CCCccchhHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC
Q 001990 394 SSGKPALRVAMQTREQHIRRDKA-TSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG 471 (985)
Q Consensus 394 ~~g~~~~~l~l~tre~~~rre~a-tsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~ 471 (985)
+.+++...........+ +..........++.+++ ..+..+ |++++.+++.++..++++.|+++| ++++.
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al--~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 289 (363)
T TIGR02326 219 ------LSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQAL--LELEKEGGVAARHQRYQQNQKTLVAGMRALG-FEPLL 289 (363)
T ss_pred ------eeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Ceecc
Confidence 22222100000000001 11111224555666665 333344 688999999999999999999987 88764
Q ss_pred CC--Ccce-EEEecCC-----HHHHHHHHHHcCceeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 472 LP--FFDT-VKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 472 ~~--~~~~-~~i~~~~-----~~~l~~~L~~~Gi~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+ .... +.|..+. ..++.+.|.++||.++... .+.+|++++.+++.+|+++++++|+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 290 DDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred CcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 32 2222 3344432 5789999999999886431 47899999889999999999999974
No 98
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.83 E-value=3.8e-19 Score=206.18 Aligned_cols=297 Identities=15% Similarity=0.205 Sum_probs=197.6
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEE
Q 001990 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~ 706 (985)
..|..+...++++.+++++|.+.. +.+++|++|+.+++.++. +++|+|++++..|.++...+++.+.+.+.
T Consensus 78 ~~G~~~~~~~le~~ia~~~g~~~~-ii~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~~~~~~~~~~ 148 (393)
T TIGR01822 78 ICGTQDIHKELEAKIAAFLGTEDT-ILYASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGVRLCKAKRYR 148 (393)
T ss_pred ccCChHHHHHHHHHHHHHhCCCcE-EEECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHhcCCceEE
Confidence 347777888999999999998764 445677776644333321 46789999998887776666777776654
Q ss_pred EeCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCC----
Q 001990 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS---- 778 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~---~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~---- 778 (985)
++ .+|++++++++++. +.++++|++.++ |.+|.+. |+++|+++|++||+++++|++|..+..+...
T Consensus 149 ~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~ 222 (393)
T TIGR01822 149 YA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-PLDEICDLADKYDALVMVDECHATGFLGPTGRGSH 222 (393)
T ss_pred eC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchH
Confidence 43 37999999999742 127888887766 6789998 8999999999999999999998644432110
Q ss_pred --CC-cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHH
Q 001990 779 --PG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 779 --~g-~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
.+ ..++|++++++||+| +|+++|++++++++.+.+...... ...++.. ....+.+
T Consensus 223 ~~~~~~~~~di~~~s~sK~l------~g~r~G~~~~~~~~~~~l~~~~~~-----------~~~~~~~-----~~~~~~a 280 (393)
T TIGR01822 223 ELCGVMGRVDIITGTLGKAL------GGASGGFTTARKEVVELLRQRSRP-----------YLFSNSL-----PPAVVGA 280 (393)
T ss_pred HhcCCCCCCeEEEEEChHHh------hCCCcEEEEeCHHHHHHHHHhCcc-----------ceecCCC-----CHHHHHH
Confidence 11 125799999999997 356789999887766544211000 0000100 1111222
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
+.+++..+ ++..+..++..++++++.+.|++ ++++. ++..+. +.+.+. .+.+..++++.|.++||.+
T Consensus 281 ~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~i~~~-----~~~~~~~l~~~L~~~gI~v 348 (393)
T TIGR01822 281 SIKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIK--PADHPI---IPVMLY-----DAVLAQRFARRLLEEGIYV 348 (393)
T ss_pred HHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeC-----CHHHHHHHHHHHHHCCeeE
Confidence 33444433 22344556778888999999986 55542 211221 223322 0134678999999999987
Q ss_pred CCCCCCC----CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 935 PTMSWPV----PGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 935 ~~~~~pv----~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
....+|. ...+|++++..+|++||| +++++|+++.+++
T Consensus 349 ~~~~~~~~~~~~~~iRis~~~~~t~edi~---~~~~~l~~~~~~~ 390 (393)
T TIGR01822 349 TGFFYPVVPKGQARIRVQISAAHTEEQLD---RAVEAFTRIGREL 390 (393)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHH---HHHHHHHHHHHHh
Confidence 5433441 246999999999999999 9999999886643
No 99
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.83 E-value=1e-18 Score=200.16 Aligned_cols=303 Identities=13% Similarity=0.129 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
+.++++.+++++|++.. ++.+++++++..++.++. .++++|+++...|......++..|++++.++.+.++
T Consensus 46 ~~~l~~~la~~~g~~~i-~~~~g~t~al~~~l~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLGMDEA-RVTPGAREGKFAVMHSLC--------EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcCCceE-EEeCCHHHHHHHHHHHhc--------CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 66899999999999543 455666666544433321 367899999887876666678899999999997665
Q ss_pred --CCCHHHHHHHHHhcC----CCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcE
Q 001990 714 --NINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (985)
Q Consensus 714 --~iDle~L~~~i~~~~----~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di 786 (985)
.+|++++++++++.. +++++|++++|+ .+|.+. |+++|+++|+++|+++++|++|..+...+ ...++++|+
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~~~d~ 194 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH-DAKKIAKVCHEYGVPLLLNGAYTVGRMPV-SGKELGADF 194 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec-cHHHHHHHHHHcCCeEEEECCcccCCcCC-CHHHcCCCE
Confidence 899999999997321 378899999995 599998 89999999999999999999986433222 234578999
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+++|+||+|+. ++++|++++++++.+.+......+... . .....++.. . ..+..+++.+..+ .+
T Consensus 195 ~~~s~~K~l~~-----~~~~G~l~~~~~~~~~l~~~~~~~~~~-------~-~~~~~~~~~-~-~~~~~~~~al~~~-~~ 258 (361)
T cd06452 195 IVGSGHKSMAA-----SAPIGVLATTEEWADIVFRTSQMFKIK-------E-VELLGCTLR-G-APLVTLMASFPHV-KE 258 (361)
T ss_pred EEecCCccccC-----CCCeEEEEECHHHHHHHhccccccccc-------e-eeeeccccC-c-hHHHHHHHHHHHH-HH
Confidence 99999999952 347899999877665542110000000 0 000000000 0 0111122223222 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCcc---ccCCCCHHHHHHHHHHCCCccCCCCCCC
Q 001990 867 GLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~---~~~g~~~~~l~~~L~e~Gi~~~~~~~pv 941 (985)
.+ +..++..++++++++.|++ ++.+....+ ...+.+.++...+. .....++.++.+.|.++||.+... ..
T Consensus 259 ~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~--~~ 333 (361)
T cd06452 259 RV-KRWDEEVEKARWFVAELEKIEGIKQLGEKP--KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKP--GL 333 (361)
T ss_pred HH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCC--CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcC--CC
Confidence 22 2333445667899999986 343321111 11222334432110 001123457999999999985211 12
Q ss_pred CCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 942 PGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 942 ~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
...+|++. ...|+||++ +++++|+++.
T Consensus 334 ~~~~ri~~-~g~~~e~~~---~l~~al~~~~ 360 (361)
T cd06452 334 TRYFKLST-YGLTWEQVE---YVVDAFKEIA 360 (361)
T ss_pred ceEEEEEe-cCCCHHHHH---HHHHHHHHHh
Confidence 35678876 447999999 9999998754
No 100
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.83 E-value=5.9e-19 Score=185.11 Aligned_cols=306 Identities=15% Similarity=0.117 Sum_probs=223.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHH-HhhhhcCCCCEEEEcC-CCChhHHHHHHHhhcCCC--eEE
Q 001990 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFD--IKV 283 (985)
Q Consensus 208 g~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~-a~~~~~~~g~~Vlv~~-~~h~s~~~~~~~~a~~~g--i~v 283 (985)
.|...=..+-..+|-|.|+...++...++.+.-+.-.+. +++.. ++++||+++ ..||+-..+....++-.+ ..+
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~--~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~ 150 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQ--EGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDL 150 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccC--CCceEEeecCCCCCcchhhhcchhhhhcccccc
Confidence 344444445578999999999888888887765555544 34433 678888888 678988887766554444 233
Q ss_pred EEe-Cchhhhc-cCCCEeEEEEEcCCC-CeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-cc
Q 001990 284 VVS-DLKDIDY-KSGDVCGVLVQYPGT-EGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QR 358 (985)
Q Consensus 284 ~~~-~~~~l~~-l~~~t~~V~v~~pn~-~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~-k~ 358 (985)
..+ .++++++ ++++++.|++++.|+ +|...|+.+|.++||++|++++.+ -.++.|.+. .-..+|+|+.++++ |.
T Consensus 151 ~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wD-LAHsaGavp~~Lh~~gaDfaigcsyKY 229 (407)
T COG3844 151 EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWD-LAHSAGAVPVDLHAAGADFAIGCSYKY 229 (407)
T ss_pred eeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEee-hhcccCCcceeecccCCCeeeeeecee
Confidence 322 3467777 889999999999985 899999999999999999999884 235666553 34789999999999 66
Q ss_pred ccccCCCCCCce-EEEEEchhhHhcCCCceeeeeecCCCCcceEEeccc-ccccccccccCCCccchhHHHHHHHHH-HH
Q 001990 359 FGVPMGYGGPHA-AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT-REQHIRRDKATSNICTAQALLANMAAM-YA 435 (985)
Q Consensus 359 lg~P~~~GGP~~-G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~t-re~~~rre~atsni~t~~~l~a~~aa~-y~ 435 (985)
| .||||+ +|+++.+++.+..-+++.||.. +.++ |.|.-.. --.+++| +.|+++..+.+.+-- -+
T Consensus 230 L-----NgGPGapa~l~v~~~h~e~~~~~lsgW~g--ha~p-f~m~~~y~p~~ga~r-----f~~gt~~V~s~aal~~aL 296 (407)
T COG3844 230 L-----NGGPGAPAGLFVAPRHRERSWPPLSGWWG--HARP-FAMEEVYAPGPGARR-----FLCGTQPVLSLAALEGAL 296 (407)
T ss_pred c-----cCCCCCceeEEeccccccccccccccccC--CCCc-chhhhccCcCccccc-----eeeCCcchhhhHHHhhhh
Confidence 6 377876 9999999988887788899853 2233 5553211 1234544 455555554432211 13
Q ss_pred HHcCcchHHHHHHHHHHHHHHHHHHHhcC-C--CEEEcCC----CCcceEEEecCCHHHHHHHHHHcCceeeeecCCeEE
Q 001990 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKL-G--TVEVQGL----PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVT 508 (985)
Q Consensus 436 ~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g--~~~~~~~----~~~~~~~i~~~~~~~l~~~L~~~Gi~~~~~~~~~lr 508 (985)
.....-+|.++.++...++.|+.+.++.. + ++++..+ .+...+++..+..+++.+.|.++||......++.+|
T Consensus 297 Difa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P~vlR 376 (407)
T COG3844 297 DIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREPDVLR 376 (407)
T ss_pred hhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCCCeee
Confidence 56667789999999999999999999875 2 3677643 234568898888999999999999977655689999
Q ss_pred EEecc-CCCHHHHHHHHHHHhC
Q 001990 509 ASFDE-TTTLEDVDKLFIVFAG 529 (985)
Q Consensus 509 is~~~-~~t~edid~ll~~l~~ 529 (985)
+.+++ |++.+|+-..+++|.+
T Consensus 377 fgftPlY~~~~DVw~AV~~L~e 398 (407)
T COG3844 377 FGFTPLYVSFVDVWDAVDALEE 398 (407)
T ss_pred ecCccceechhHHHHHHHHHHH
Confidence 99998 7899999888888864
No 101
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.83 E-value=1.8e-18 Score=198.70 Aligned_cols=320 Identities=14% Similarity=0.142 Sum_probs=214.5
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCC--cceeeccchHHHHHHHHHH
Q 001990 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMC 247 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~--~~~sl~~~~ta~~ea~~~a 247 (985)
..+.| |..+++.+.+++.. + | ..+.++ ..+.+.++++.+++++|.+. ..+.++.+||.++++++.+
T Consensus 8 ~~~pg--P~~~~~~~~~a~~~-~-~----~~~~~~----~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~ 75 (368)
T PRK13479 8 LLTPG--PLTTSRTVREAMLR-D-W----GSWDDD----FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGS 75 (368)
T ss_pred eecCC--CCCCCHHHHHHhCC-C-C----CCCChH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHh
Confidence 34677 44577777644333 2 3 122222 22567889999999999865 3466789999999988877
Q ss_pred hhhhcCCCCEEEEcCC-CChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCCeeecc
Q 001990 248 NNIQKGKKKTFIIASN-CHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLD 314 (985)
Q Consensus 248 ~~~~~~~g~~Vlv~~~-~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~d 314 (985)
+. . ++++|++... .++.. +...++..|++++.++. +++++ ++ ++++.|++.+| |.+|.+.|
T Consensus 76 l~-~--~~~~vlv~~~~~~~~~---~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 76 LV-P--RDGKVLVPDNGAYGAR---IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred cc-C--CCCeEEEEeCCchHHH---HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 63 2 6677777654 44443 22335567888887754 34444 43 45678888888 67999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeee
Q 001990 315 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (985)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~ 392 (985)
+++|+++||++|++++|| ...++|... +..++++|++++++ |++++ +||+||+++++++++.+.....
T Consensus 150 ~~~i~~l~~~~~~~livD-a~~~~g~~~~~~~~~~~d~~v~s~~K~l~g-----~~G~G~l~~~~~~~~~~~~~~~---- 219 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVD-AMSSFGAIPIDIAELGIDALISSANKCIEG-----VPGFGFVIARRSELEACKGNSR---- 219 (368)
T ss_pred HHHHHHHHHHcCCEEEEE-cccccCCccccccccCceEEEecCcccccc-----CCCceEEEECHHHHHHhhcCCC----
Confidence 999999999999999996 345666432 34678999999998 76753 4678999999998887753211
Q ss_pred cCCCCcceEEeccccccccccccc---CCCccchhHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001990 393 DSSGKPALRVAMQTREQHIRRDKA---TSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 393 d~~g~~~~~l~l~tre~~~rre~a---tsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
.+.+++........+... |.|+ ..++++.+++ ..+..+ |++++.+++.++++++++.|+++| ++
T Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~t~~~---~~~~~l~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 287 (368)
T PRK13479 220 ------SLSLDLYDQWAYMEKTGQWRFTPPT---HVVAAFYQAL--LELEEEGGVPARGARYANNQRTLVAGMRALG-FE 287 (368)
T ss_pred ------CeeecHHHHHhhhcccCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 122221110000001111 3333 4555665655 333333 588888999999999999999997 88
Q ss_pred EcCCC--Ccc-eEEEecCC-----HHHHHHHHHHcCceeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 469 VQGLP--FFD-TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 469 ~~~~~--~~~-~~~i~~~~-----~~~l~~~L~~~Gi~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
++.++ ..+ .+.|..+. ..++.++|.++||.++... .+.+|++.+-++|++|+++++++|+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAE 359 (368)
T ss_pred ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 76322 111 24444332 5789999999999986421 35899998889999999999999974
No 102
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.83 E-value=1.5e-18 Score=198.14 Aligned_cols=263 Identities=11% Similarity=0.101 Sum_probs=193.0
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhh-hcCCC-CEEEEcCCCChhHHHHHHHhhcCCCeEE
Q 001990 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKK-KTFIIASNCHPQTIDICITRADGFDIKV 283 (985)
Q Consensus 206 sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~-~~~~g-~~Vlv~~~~h~s~~~~~~~~a~~~gi~v 283 (985)
+....+.+.++++.+++++|+++.++.+++|+|.+++.++.++.. ..+++ ++|+++..+||++...++.. +..|+++
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v 115 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEE
Confidence 334557788999999999999988898999999888877665531 11134 78999999999999998764 4569998
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001990 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (985)
Q Consensus 284 ~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~ 352 (985)
+.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||. .+++|.+. +..++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~-a~~~g~~~~~~~~~~~D~~ 194 (353)
T TIGR03235 116 TYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDA-AQVVGKITVDLSADRIDLI 194 (353)
T ss_pred EEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEc-hhhcCCccccccccCCCEE
Confidence 88764 35656 7778999999987 689999999999999999999999952 44666543 3457899999
Q ss_pred EecCccccccCCCCCCceEEEEEchhhHhc--CCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHH
Q 001990 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRM--MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (985)
Q Consensus 353 v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~--lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~ 430 (985)
+++++++.+| ||+|+++++++.... +.+.+.| +. +..+.+.+|+|+ ..++++.
T Consensus 195 ~~s~~K~~gp-----~g~g~l~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~gt~~~---~~~~al~ 249 (353)
T TIGR03235 195 SCSGHKIYGP-----KGIGALVIRKRGKPKAPLKPIMFG------GG-----------QERGLRPGTLPV---HLIVGMG 249 (353)
T ss_pred EeehhhcCCC-----CceEEEEEccCcccccccCceeeC------CC-----------CcCccccCCCCh---HHHHHHH
Confidence 9999445434 468999999875432 2222222 00 112345688887 4566666
Q ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C-cceEEEecCC--HHHHHHHHHHcCceee
Q 001990 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLR 500 (985)
Q Consensus 431 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~-~~~~~i~~~~--~~~l~~~L~~~Gi~~~ 500 (985)
+++ .++ .+|++++.+++.+++++++++|++.| ++++.++ . ...++|..++ .+++.++|.+ ||.++
T Consensus 250 ~al--~~~-~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 250 EAA--EIA-RRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred HHH--HHH-HhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEE
Confidence 666 232 35889999999999999999999877 9987432 1 2245666565 7889999965 77664
No 103
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=2.1e-18 Score=196.81 Aligned_cols=318 Identities=14% Similarity=0.133 Sum_probs=210.9
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCc--ceeeccchHHHHHHHHHHhhhhcCC
Q 001990 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNNIQKGK 254 (985)
Q Consensus 177 ~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~--~~sl~~~~ta~~ea~~~a~~~~~~~ 254 (985)
|..+++.+.+++.. .| ..+.++ ..+.+.++++.+++++|+++. .+.++.+||.++++++.++. . +
T Consensus 7 p~~~~~~~~~~~~~--~~----~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~--~ 73 (355)
T TIGR03301 7 PLSTSATVRDAMLV--DW----CHWDSE----FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-P--R 73 (355)
T ss_pred CCCCCHHHHHHhhh--hc----cCCCHH----HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-C--C
Confidence 45577777644333 22 222222 236677888999999999864 46678899998888877653 2 4
Q ss_pred CCEEE-EcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001990 255 KKTFI-IASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (985)
Q Consensus 255 g~~Vl-v~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~dl~~I~~~ 321 (985)
+++++ ++...|++.... .++..|.+++.++. +++++ +. ++++.|++.++ |.+|.+.|+++|+++
T Consensus 74 ~~~vi~~~~~~~~~~~~~---~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 74 DGKLLVLINGAYGERLAK---ICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CCeEEEECCCchhhHHHH---HHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHH
Confidence 56655 556677653322 24456877777643 34555 43 45667776665 679999999999999
Q ss_pred HHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcc
Q 001990 322 AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (985)
Q Consensus 322 a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~ 399 (985)
||++|++++||+ ..++|... +..++++|++++++ |+++ |+||+|++++++++++.+.++. +.
T Consensus 151 ~~~~~~~livD~-~~s~g~~~~~~~~~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~----------~~ 214 (355)
T TIGR03301 151 ARSHGAVLIVDA-MSSFGAIPIDIEELDVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNA----------RS 214 (355)
T ss_pred HHHcCCEEEEEe-ccccCCcccchhhcCccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCC----------CC
Confidence 999999999963 45666442 34678999999998 7674 3467899999999887764321 11
Q ss_pred eEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-Ccc-
Q 001990 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFD- 476 (985)
Q Consensus 400 ~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~G-l~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~- 476 (985)
+.+++..-.+...+...+.+..+....+++.+++ ..+..+| +++..++..++.+++++.|+++| +++..++ ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~~~ 291 (355)
T TIGR03301 215 LYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQAL--EELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQSP 291 (355)
T ss_pred ceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHH--HHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCCCC
Confidence 3333211001111111222222224445555554 4444555 88899999999999999999987 8865322 111
Q ss_pred -eEEEecCC-----HHHHHHHHHHcCceeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 477 -TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 477 -~~~i~~~~-----~~~l~~~L~~~Gi~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+.+..+. ..++.++|.++||.+.... .+.+|++++.++|++|+++++++|+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 292 IIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 23455442 4689999999999886532 36899999999999999999999963
No 104
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.83 E-value=1.2e-18 Score=200.19 Aligned_cols=294 Identities=13% Similarity=0.136 Sum_probs=186.7
Q ss_pred hhhhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 625 DQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 625 e~~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
....|..+.++++++.+++++|.+.+ +++++|+.++.+. +..+ .++++.|++...+|++....++......
T Consensus 49 ~~~~g~~~~~~~~e~~la~~~~~~~~-l~~~sG~~a~~~~---~~~~-----~~~~d~ii~d~~~H~sv~~~~~~~~~~~ 119 (370)
T PRK05937 49 RAILGPSSLLDDLEHKIAHFHGAPEA-FIVPSGYMANLGL---CAHL-----SSVTDYVLWDEQVHISVVYSLSVISGWH 119 (370)
T ss_pred CcccCChHHHHHHHHHHHHHhCCCeE-EEECChHHHHHHH---HHHh-----CCCCCEEEEEhhhhHHHHHHHHHcCCce
Confidence 44567778899999999999999765 7778888766322 1111 1245777777888877666555433233
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcC---CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC-
Q 001990 705 VSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~---~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~- 779 (985)
+.++ .+|+++|++++++.. +++.+|+++++ |++|.+. |+++|+++|+++|++++||++|..+..+....
T Consensus 120 ~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g 193 (370)
T PRK05937 120 QSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKG 193 (370)
T ss_pred EEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 3343 369999999997432 34667778887 4799998 89999999999999999999997665443111
Q ss_pred --CcCC---CcEEEeCCcccccccCCCCCCcceeeeecccccC---cCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 780 --GYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP---FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 780 --g~~g---~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~---~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
..++ .++.+.+++|.| |++|+|+++.++.... ..++.. +..+ . ++.
T Consensus 194 ~~~~~~~~~~~~~~~tlsK~~------g~~G~~vl~~~~~~~~~~~~~~~~~-----------~s~~---~--~~~---- 247 (370)
T PRK05937 194 FCHSLGYENFYAVLVTYSKAL------GSMGAALLSSSEVKQDLMLNSPPLR-----------YSTG---L--PPH---- 247 (370)
T ss_pred hHHhhCCCCCcEEEEechhhh------hcCceEEEcCHHHHHHHHHhCCCCe-----------ecCC---C--CHH----
Confidence 1233 235667778877 3346676665432111 111110 0111 1 111
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
.+.++.+.+..+..++ ....++..++.+++.+.|... ..+ . ... +.++ +.+..++.+.|.++|
T Consensus 248 ~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~----~~~---~-~~~--i~~~------~~~~~~~~~~L~~~g 310 (370)
T PRK05937 248 LLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA----APG---C-VQP--IFLP------GISEQELYSKLVETG 310 (370)
T ss_pred HHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC----CCC---C-EEE--EEeC------ChhHHHHHHHHHHCC
Confidence 1222233344443333 233455666777777766431 011 1 111 2232 245678899999999
Q ss_pred CccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHcc
Q 001990 932 FHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAG 979 (985)
Q Consensus 932 i~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~ 979 (985)
|.++...+|..+.||+|++.++|+|||| +|+++|++++++..++.
T Consensus 311 i~v~~~~~~~~~~iRis~~~~~t~edid---~l~~~L~~~~~~~~~~~ 355 (370)
T PRK05937 311 IRVGVVCFPTGPFLRVNLHAFNTEDEVD---ILVSVLATYLEKYQKNV 355 (370)
T ss_pred eeEEeeCCCCCCEEEEEcCCCCCHHHHH---HHHHHHHHHHHHhCCCc
Confidence 9887555565678999999999999999 99999999988765543
No 105
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.83 E-value=4.5e-19 Score=221.39 Aligned_cols=320 Identities=13% Similarity=0.095 Sum_probs=204.9
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCcc--ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH---HHhcC
Q 001990 627 AQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG 701 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~~~--~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~---~~~~G 701 (985)
++-..+.++++++.+++++|++.. .+.+++|++ ++..+++..+. ..++++||++...|.++... ++..|
T Consensus 73 s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT--~alnlva~~l~----~~~gd~Iv~t~~eH~svl~~~~~a~~~G 146 (805)
T PLN02724 73 SMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT--AALKLVGETFP----WSSESHFCYTLENHNSVLGIREYALEKG 146 (805)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH--HHHHHHHHHCC----CCCCCeEEEeeccccchHHHHHHHHHcC
Confidence 344667899999999999999653 234444433 13334344331 23578899988888765433 34579
Q ss_pred cEEEEEeCC--------CCCCCCH--HHHHHHHH----h---cCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc----
Q 001990 702 MKIVSVGTD--------AKGNINI--EELRKAAE----A---NRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN---- 759 (985)
Q Consensus 702 ~~v~~v~~~--------~~g~iDl--e~L~~~i~----~---~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~---- 759 (985)
+++++++++ ..+.+|+ ++|++.++ . ..++|++|.+++. |.+|.+. |+++|..+++..
T Consensus 147 ~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~-pi~~i~~~~~~~~~~~ 225 (805)
T PLN02724 147 AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKF-PLDLVKLIKDNQHSNF 225 (805)
T ss_pred CeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcC-CHHHHHHHHHhccccc
Confidence 999999886 3455554 66776642 1 1246788888885 6899999 899875555432
Q ss_pred ----CCEEEEEccccccccCCCCCCcCCCcEEEeCCcccccccCCCCCC-cceeeeecccccCcCCCCccccCC------
Q 001990 760 ----GGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTG------ 828 (985)
Q Consensus 760 ----g~lliVD~a~~~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~~lpg~~~g~~~------ 828 (985)
+++++||+||+.++..+ +..++++|++++|+|||| ||| |+|++++++++.+.+.+..+|+..
T Consensus 226 ~~~g~~~v~vDaaQ~~g~~pi-Dv~~~~~Dfl~~S~HK~~------GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~ 298 (805)
T PLN02724 226 SKSGRWMVLLDAAKGCGTSPP-DLSRYPADFVVVSFYKIF------GYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIA 298 (805)
T ss_pred ccCcceEEEeehhhhcCCCCC-ChhhcCCCEEEEecceec------cCCCCceEEEEehhhhhhhcCCccCCCceEEEec
Confidence 35799999998777664 456789999999999998 456 799999998876666544444311
Q ss_pred C--C------CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccC------CeeE
Q 001990 829 G--I------PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY------PILF 894 (985)
Q Consensus 829 ~--~------~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~------~i~~ 894 (985)
+ . ...+.+.||.++.+ . ..+.+|..++..+ |+.++.++...+++++.++|++.. .+.+
T Consensus 299 ~~~~~~~~~~~~~rfE~GT~n~~~----i-~~l~aal~~l~~i---g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~i 370 (805)
T PLN02724 299 DIDFVKRRERVEQRFEDGTISFLS----I-AALRHGFKLLNRL---TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVL 370 (805)
T ss_pred ccceeeccccHHHHhcCCCcchhH----H-HHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 0 0 01134667777653 2 2233444444444 566677788889999999998632 2333
Q ss_pred cCCC------CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC---CCCC-------------------------
Q 001990 895 RGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MSWP------------------------- 940 (985)
Q Consensus 895 ~g~~------~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~---~~~p------------------------- 940 (985)
.|+. ......+.|.+.... ...+...++...+.++||.+.+ |..+
T Consensus 371 yg~~~~~~~~~~r~~ivsFnv~~~~-~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~ 449 (805)
T PLN02724 371 YGNHTFKLEFHIQGPIVTFNLKRAD-GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWD 449 (805)
T ss_pred cCCCCCCCCcccccCEEEEEEEcCC-CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCc
Confidence 3321 011223334443110 0013345566555678998632 1100
Q ss_pred -------C-CCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 941 -------V-PGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 941 -------v-~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
. .+++|+|++.+||++||| +|+++|++..
T Consensus 450 ~~~~~~~~~~G~vRvS~g~ynt~eDvd---~lv~~l~~~~ 486 (805)
T PLN02724 450 DQDVIHGRPTGAVRVSFGYMSTFEDCQ---KFIDFIISSF 486 (805)
T ss_pred hhheecCcccceEEEEcCccCCHHHHH---HHHHHHHHHh
Confidence 0 288999999999999999 9999999865
No 106
>PRK07179 hypothetical protein; Provisional
Probab=99.83 E-value=1.1e-18 Score=203.30 Aligned_cols=287 Identities=16% Similarity=0.157 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
...++++.+++++|.+.+ +++++|++++.+++.++. .+++.|+++...|.+....+...|++++.++.
T Consensus 100 ~~~~le~~la~~~g~~~~-~~~~sG~~An~~~l~~l~--------~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~--- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFESC-LLCQSGWAANVGLLQTIA--------DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH--- 167 (407)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEECCcCHHHHHHHHHCCCeEEEecC---
Confidence 456788999999999765 668888887755544432 35678888888787666666778888766654
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC------CCC-cCCC
Q 001990 713 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YIGA 784 (985)
Q Consensus 713 g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~------~~g-~~g~ 784 (985)
.|+++|++++++ .++++|++++| |++|.+. |+++|+++|+++|+++|+|++|..+..+.. ..+ ..++
T Consensus 168 --~d~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~-pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~v 242 (407)
T PRK07179 168 --NDVDHLRRQIER--HGPGIIVVDSVYSTTGTIA-PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRV 242 (407)
T ss_pred --CCHHHHHHHHHh--cCCeEEEECCCCCCCCccc-cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCC
Confidence 599999999972 24778888877 5799998 899999999999999999999964432211 011 1246
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
|++++|+||+|+ +++|++++++++.+.++... . ....+ ++.... .++++.+.+..+.
T Consensus 243 di~~~S~sK~~g-------~~~G~l~~~~~~~~~~~~~~--~---------~~~~~---~t~~~~--~~aa~~aal~~~~ 299 (407)
T PRK07179 243 HFITASLAKAFA-------GRAGIITCPRELAEYVPFVS--Y---------PAIFS---STLLPH--EIAGLEATLEVIE 299 (407)
T ss_pred CEEEeechHhhh-------ccCeEEEeCHHHHHHHHHhC--c---------CeeeC---CCCCHH--HHHHHHHHHHHHh
Confidence 999999999983 24789998877655442100 0 00000 011011 1112223344432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCC---
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--- 940 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~p--- 940 (985)
. ..+..++..++++++++.|++ ++++. +. +. .+.+.+. ...+...+.+.|.++||.+.....|
T Consensus 300 ~--~~~~~~~l~~~~~~l~~~L~~~g~~v~--~~-~~---i~~l~~~-----~~~~~~~~~~~L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 300 S--ADDRRARLHANARFLREGLSELGYNIR--SE-SQ---IIALETG-----SERNTEVLRDALEERNVFGAVFCAPATP 366 (407)
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHcCCCCC--CC-CC---EEEEEeC-----CHHHHHHHHHHHHHCCceEeeecCCCCC
Confidence 2 134556778888999999987 45443 21 22 2233332 0124567888999999985432223
Q ss_pred -CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 941 -VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 941 -v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
..+.+||+++..+|++||| +++++|++++++.
T Consensus 367 ~~~~~lRis~~~~~t~edi~---~~~~~l~~~~~~~ 399 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLD---RVLEVCREARDEV 399 (407)
T ss_pred CCCceEEEEECCCCCHHHHH---HHHHHHHHHHHhh
Confidence 2478999999999999999 9999999987753
No 107
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.83 E-value=1.9e-18 Score=198.82 Aligned_cols=359 Identities=16% Similarity=0.138 Sum_probs=227.0
Q ss_pred CCccccccCCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccc---ccccccccc---------CCCCcchhh
Q 001990 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP---VTWPSFANI---------HPFAPADQA 627 (985)
Q Consensus 560 ~~pv~~~~~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~---~~~~~f~~~---------~p~~p~e~~ 627 (985)
.+| +.|+++.++...|.+|+..|..-...-+ |.| ...-.+. +.+.+|.-| .-.|| . .
T Consensus 29 ~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~--~~g-----ere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~-k-a 97 (444)
T TIGR03531 29 KIP--EEGWDDETIELFLHELSVMDTNNFPNNV--GVG-----EREGRVFSKLVARRHYRFCHGIGRSGDLVAPQP-K-A 97 (444)
T ss_pred cCC--ccCCCHHHHHHHHHHHhcCCcCCCcccc--CcC-----cccceeechhhhhcccceecCCCCcccccccCc-c-c
Confidence 567 6899999999999999998743222112 221 1111111 111222212 22444 2 2
Q ss_pred hc---HHHHHHHHHHHHHHHhCCCc--cceecChHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcC
Q 001990 628 QG---YQEMFNNLGEWLCTITGFDS--FSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (985)
Q Consensus 628 ~G---~~~~~~el~~~la~l~G~~~--~~~~~~sGa-~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G 701 (985)
.| ...+..++++++++++|.+. ..+.+++|+ .+...++.+++ .++ .++++||++...|.+..+++.+.|
T Consensus 98 ~gss~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr----~~~-~~gd~VI~p~~th~S~~kAi~~~G 172 (444)
T TIGR03531 98 AGSSLLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALR----HKR-PKAKYVIWPRIDQKSCIKAISTAG 172 (444)
T ss_pred cCccHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcC----CcC-CCCCEEEEECcChHHHHHHHHHcC
Confidence 23 66788899999999999983 234455555 23322333222 111 146789999998988888899999
Q ss_pred cEEEEEeC---CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCc--cccccCHHHHHHHHHHcCCEEEEEccccccccCC
Q 001990 702 MKIVSVGT---DAKGNINIEELRKAAEANRDNLSTLMVTYPSTH--GVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (985)
Q Consensus 702 ~~v~~v~~---~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~--G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~ 776 (985)
++++.+++ ++++.+|+++|+++|++..+++.++++.+|+++ |..+ |+++|+++|++||+++|+|+|+.....-+
T Consensus 173 ~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d-dL~eIa~la~k~gI~lIvDaAyg~~~~~~ 251 (444)
T TIGR03531 173 FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPD-DIEEIAKICANYDIPHIVNNAYGLQSNKY 251 (444)
T ss_pred CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchh-CHHHHHHHHHHcCCEEEEECcCcCcChhh
Confidence 99999995 345889999999999843225667777777654 4666 89999999999999999999986322111
Q ss_pred C---CC-CcCC-CcEEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 777 T---SP-GYIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 777 ~---~~-g~~g-~Di~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
. .. ...| +|++++++||+|.+|.+ +|+++++ +++.+.+..... .... .
T Consensus 252 ~~~~~~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~~y~----------------g~~~-----~ 305 (444)
T TIGR03531 252 MELINKAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISKSYP----------------GRAS-----A 305 (444)
T ss_pred hhhhhccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHHhcc----------------CCCC-----C
Confidence 0 01 1233 79999999999977622 4566664 455444321100 0000 0
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-----cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHH
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-----HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-----~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~ 925 (985)
.....+|+.+..+|.+|+++..++..++++++.+.|++ +..+ ...+.++.. +.+.+..+ .+.+...+..
T Consensus 306 s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~-~~~~~n~is--~~~~~~~~---~~~~~~~~g~ 379 (444)
T TIGR03531 306 SPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERL-LDTPENPIS--SAMTLSTL---KGKDPTMLGS 379 (444)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEe-ecCCCCcee--EEEecccc---cccCHHHHHH
Confidence 12345788888999999999999999999999999975 2223 222223332 33333321 1446778888
Q ss_pred HHHHCCCccCC------------CC---C-------CCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 926 RLMDYGFHGPT------------MS---W-------PVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 926 ~L~e~Gi~~~~------------~~---~-------pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
.|..+++-... +. | |. ..+.+......|++||| .|++.|.++
T Consensus 380 ~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~~~~g~~~~~~~---~~~~~l~~~ 443 (444)
T TIGR03531 380 MLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPC-PYITAAAAIGMTKEDVD---TFVSRLEKS 443 (444)
T ss_pred HHHhCCCCCceeecCCCceEECCEEeecccccccCCCc-hhHHHHHHhCCcHHHHH---HHHHHHhhc
Confidence 88888774211 00 1 11 23555555678999999 999988764
No 108
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=1.7e-18 Score=201.23 Aligned_cols=297 Identities=20% Similarity=0.238 Sum_probs=191.9
Q ss_pred HHHHHHHH----HHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH-HHH--hcCcEE
Q 001990 632 EMFNNLGE----WLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAA--MCGMKI 704 (985)
Q Consensus 632 ~~~~el~~----~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~-~~~--~~G~~v 704 (985)
+.+.++++ .+++++|.+.+.+.++||+.|+.+++.++. +++|+|++++..|+.+.. .++ ..+...
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~ 141 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL--------KPGDTILGMSLSHGGHLTHGAKVSLSGKWY 141 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------CCCCEEEEcCccceeeeecCCcceecccee
Confidence 44566666 999999999876777899888866665542 478999999988876311 111 112222
Q ss_pred --EEEeCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCC-CC
Q 001990 705 --VSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PG 780 (985)
Q Consensus 705 --~~v~~~~-~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~-~g 780 (985)
+.++++. ++.+|+++++++++. .++++|+++.+. +|... |+++|.++|+++|+++++|+||+.|..+... ++
T Consensus 142 ~~~~~~~~~~~~~~d~~~le~~l~~--~~~klVi~~~~~-~g~~~-dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~ 217 (416)
T PRK13034 142 NAVQYGVDRLTGLIDYDEVEELAKE--HKPKLIIAGFSA-YPREL-DFARFREIADEVGALLMVDMAHIAGLVAAGEHPN 217 (416)
T ss_pred eeEEcccccccCCcCHHHHHHHHhh--cCCeEEEECCCc-ccccc-CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCC
Confidence 3444433 367999999999863 357778775543 57666 8999999999999999999999765543221 11
Q ss_pred c-CCCcEEEeCCcccccccCCCCCCcceeeeeccc-ccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHH
Q 001990 781 Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 781 ~-~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~-l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a 858 (985)
. .++|++++++||+|+ ||.+|+++++++ +...+....+. +. ..+.. .+..++.+.+
T Consensus 218 ~~~~~Di~~~s~~K~l~------g~~GG~v~~~~~~~~~~~~~~~~~------------~~--~~~~~--~~~~aa~~~a 275 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLR------GPRGGMILTNDEEIAKKINSAVFP------------GL--QGGPL--MHVIAAKAVA 275 (416)
T ss_pred CCCCceEEEEeCcccCC------CCCCeEEEECcHHHHHHHHhhcCC------------cc--cCCcc--HHHHHHHHHH
Confidence 1 258999999999984 454577766643 33222111110 00 00000 1112222223
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC-
Q 001990 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT- 936 (985)
Q Consensus 859 ~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~- 936 (985)
.+..+. .+..+..++..+++++|+++|++ ++++...+. ..+.+.+.+.. .+.....+.++|.++||.+..
T Consensus 276 l~~~~~-~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~---~t~i~~v~~~~----~~~~~~~~~~~L~~~GI~v~~~ 347 (416)
T PRK13034 276 FGEALQ-PEFKTYAKQVIANAQALAEVLKERGYDLVSGGT---DNHLLLVDLRP----KGLSGKDAEQALERAGITVNKN 347 (416)
T ss_pred HHHHhC-hhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCC---CCcEEEEEcCC----CCCCHHHHHHHHHhCCcEEecc
Confidence 333332 23345567889999999999987 666542111 23345555541 245677788999999999864
Q ss_pred -----CCCC-CCCEEEEeccC----CCCHHhhchHHHHHHHHHHHHH
Q 001990 937 -----MSWP-VPGTLMIEPTE----SESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 937 -----~~~p-v~~~lris~t~----~~t~eeId~~~~~i~aL~~i~~ 973 (985)
..+| ++..||++++. .+|++||+ +++++|.+++.
T Consensus 348 ~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~---~l~~~l~~~~~ 391 (416)
T PRK13034 348 TVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFR---EIANWILDVLD 391 (416)
T ss_pred CCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHH---HHHHHHHHHHh
Confidence 2233 45789999988 67799999 99999998766
No 109
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.82 E-value=1.5e-18 Score=201.14 Aligned_cols=281 Identities=14% Similarity=0.163 Sum_probs=196.1
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
...|+.+...++++.+|+++|.+. +.++++++.+..+++.++ +. +||+|++++..|+++...++. ++..++.+.
T Consensus 77 ~~~G~~~~~~~le~~ia~~~g~~~--~ii~~~~~~a~~~~~~~l-~~--~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~ 150 (393)
T TIGR01822 77 FICGTQDIHKELEAKIAAFLGTED--TILYASCFDANGGLFETL-LG--AEDAIISDALNHASIIDGVRL-CKAKRYRYA 150 (393)
T ss_pred cccCChHHHHHHHHHHHHHhCCCc--EEEECchHHHHHHHHHHh-CC--CCCEEEEeccccHHHHHHHHh-cCCceEEeC
Confidence 345778888999999999999864 777889887777666655 33 889999999999999988754 444555555
Q ss_pred EeCchhhhc-cC----C--CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC--------C-cc
Q 001990 285 VSDLKDIDY-KS----G--DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP--------G-EL 347 (985)
Q Consensus 285 ~~~~~~l~~-l~----~--~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p--------~-~~ 347 (985)
..|++++++ +. + +|++|++.++ |++|.+.|+++|+++||++|+++++| +.++.|.+... + ..
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~ 229 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVD-ECHATGFLGPTGRGSHELCGVMG 229 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEE-CCccccCcCCCCCchHHhcCCCC
Confidence 567777776 43 2 7888887765 78999999999999999999999995 34455543211 1 23
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001990 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (985)
Q Consensus 348 GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l 426 (985)
++|++++|. |+++ |+..|++++++++.+.+... ...+.+ .+|.+ +...
T Consensus 230 ~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~----------~~~~~~------------~~~~~---~~~~ 278 (393)
T TIGR01822 230 RVDIITGTLGKALG------GASGGFTTARKEVVELLRQR----------SRPYLF------------SNSLP---PAVV 278 (393)
T ss_pred CCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHh----------Ccccee------------cCCCC---HHHH
Confidence 689999998 8764 34458999988877655110 000111 11111 1222
Q ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee-
Q 001990 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (985)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~- 502 (985)
.+..+++ ..+ ++.+++.++..++.+++++.|++.| +++... ....+.+..++ +.++.+.|.++||.+...
T Consensus 279 ~a~~~al--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~ 352 (393)
T TIGR01822 279 GASIKVL--EML--EASNELRDRLWANTRYFRERMEAAG-FDIKPA-DHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFF 352 (393)
T ss_pred HHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 2333333 332 2456788889999999999999886 776532 12234444433 678999999999987532
Q ss_pred ----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 ----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 ----~--~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. ...+|+|++.++|++||++++++|..
T Consensus 353 ~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 353 YPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 1 24699999999999999999999974
No 110
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=9.5e-19 Score=205.82 Aligned_cols=284 Identities=12% Similarity=0.088 Sum_probs=192.0
Q ss_pred HHHHHHH-HHHHHHHhhCCCCcceeec---cchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhc------C
Q 001990 209 RLESLLN-FQTMIADLTGLPMSNASLL---DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD------G 278 (985)
Q Consensus 209 ~l~~i~e-~q~~ia~L~g~~~~~~sl~---~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~------~ 278 (985)
..+.+.+ +++.+++++|++.+++... .+||.+..+++.++ +. +||+|++++.+|++....++.+.+ .
T Consensus 77 ~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~ 153 (452)
T PTZ00094 77 VVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-LQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSATS 153 (452)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-cC--CCCEEEecccccCCcccccccccccccccce
Confidence 3455653 7889999999987653222 57777777766665 33 789999999999998877643221 1
Q ss_pred CCeEEEE--------eCchhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-----C
Q 001990 279 FDIKVVV--------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-----P 343 (985)
Q Consensus 279 ~gi~v~~--------~~~~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-----~ 343 (985)
.++++.. +|++++++ +. .+++.|++.++ .+|.+.|+++|+++||++|++++||+ .+++|.+. .
T Consensus 154 ~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s-~~g~~~di~~I~~i~~~~ga~l~vDa-aq~~G~i~~~~~~~ 231 (452)
T PTZ00094 154 IYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGAS-AYPRDIDYKRFREICDSVGAYLMADI-AHTSGLVAAGVLPS 231 (452)
T ss_pred eeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCC-CCCCccCHHHHHHHHHHcCCEEEEec-cchhccccCCCCCC
Confidence 1233333 24456666 53 25566666544 59999999999999999999999953 45666552 2
Q ss_pred CCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccc
Q 001990 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (985)
Q Consensus 344 p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t 422 (985)
+. .|+|++++|+ |+|++| ..|++++++++.+.+..++ + ...| + .. .|+.+.
T Consensus 232 ~~-~~~D~l~~S~hK~l~GP------~Gg~l~~~~~~~~~l~~~~-----~---~~~~-----p-----~~-~G~~~~-- 283 (452)
T PTZ00094 232 PF-PYADVVTTTTHKSLRGP------RSGLIFYRKKVKPDIENKI-----N---EAVF-----P-----GL-QGGPHN-- 283 (452)
T ss_pred CC-CCCcEEEcCCccCCCCC------CceEEEEecccchHHHHhh-----c---cccC-----C-----CC-CCCchH--
Confidence 22 3899999999 777655 4477888776544332111 0 0000 0 01 233333
Q ss_pred hhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcceEEEecCC--HHHHHHHHHHcCc
Q 001990 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD--AHAIASAAYKIEM 497 (985)
Q Consensus 423 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~~~~i~~~~--~~~l~~~L~~~Gi 497 (985)
..++++.+++ .++...+.+++.+++.+++++|++.|++.| +++... .....+.+..++ ..++.+.|.++||
T Consensus 284 -~~iaal~~al--~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 359 (452)
T PTZ00094 284 -HQIAAIAVQL--KEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNI 359 (452)
T ss_pred -HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCc
Confidence 3555666665 555556788999999999999999998886 888732 222234444444 7788899988899
Q ss_pred eeee---------ecCCeEEEEeccCCC----HHHHHHHHHHHhC
Q 001990 498 NLRV---------VDSNTVTASFDETTT----LEDVDKLFIVFAG 529 (985)
Q Consensus 498 ~~~~---------~~~~~lris~~~~~t----~edid~ll~~l~~ 529 (985)
.+.. ..++.+|+|++++|| ++|+++++++|..
T Consensus 360 ~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 360 SVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred EEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 8842 124789999999987 9999999999974
No 111
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=2.1e-18 Score=200.66 Aligned_cols=292 Identities=20% Similarity=0.199 Sum_probs=191.2
Q ss_pred HHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH-----HHhcCcEEEEEeCCC
Q 001990 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (985)
Q Consensus 637 l~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~-----~~~~G~~v~~v~~~~ 711 (985)
.++.+++++|.+...+.+++|++|+.+++.++. +++++|+++.+.|+.+... ++..|.+++.++++.
T Consensus 70 ~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 141 (402)
T cd00378 70 AIERAKKLFGAEYANVQPHSGSQANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGV 141 (402)
T ss_pred HHHHHHHHhCCCceeeecCCcHHHHHHHHHHhc--------CCCCEEEEecCccCccccccccccccccceeEEEecCCc
Confidence 567888999998766777777777654444332 4678999998888766433 556788777776643
Q ss_pred ---CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccC---CCCCCcCCCc
Q 001990 712 ---KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSPGYIGAD 785 (985)
Q Consensus 712 ---~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g---~~~~g~~g~D 785 (985)
++.+|++++++++.+ +++++|++++|+ +|... |+++|+++||++|+++++|++|..++.. ...+.. ++|
T Consensus 142 ~~~~~~id~~~l~~~i~~--~~~~~v~~~~~~-~~~~~-~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 142 DPETGLIDYDALEKMALE--FKPKLIVAGASA-YPRPI-DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcccCCcCHHHHHHHHHh--CCCCEEEecCcc-cCCCc-CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCc
Confidence 589999999999963 467788887765 46666 8999999999999999999998544321 111223 689
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
++++|+||+| +||++|++++++ ++.+.+...... ...+++.. ...++.+ .++..+.
T Consensus 217 v~~~s~sK~l------~G~~gg~i~~~~~~~~~~l~~~~~~---------~~~~~~~~-------~~~~a~~-~al~~~~ 273 (402)
T cd00378 217 VVTTTTHKTL------RGPRGGLILTRKGELAKKINSAVFP---------GLQGGPHL-------HVIAAKA-VALKEAL 273 (402)
T ss_pred EEEeccccCC------CCCCceEEEeccHHHHHHHHHHhCc---------cccCCchH-------HHHHHHH-HHHHHHh
Confidence 9999999998 367778887775 665443210000 00011100 1111111 2222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCC---
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--- 940 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~p--- 940 (985)
..++.+..++..++++++.+.|++ ++.+.. .+.+ .+.+.++++. .+.+...+.+.|.++||.+....+|
T Consensus 274 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~--~~~v~v~~~~----~~~~~~~~~~~l~~~gI~v~~~~~p~~~ 346 (402)
T cd00378 274 EPEFKAYAKQVVENAKALAEALKERGFKVVS-GGTD--NHLVLVDLRP----KGITGKAAEDALEEAGITVNKNTLPWDP 346 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCeEee-cCCC--CeEEEEeCCc----cCCCHHHHHHHHHHcCcEEcCCcCCCCC
Confidence 224556667788899999999987 555432 1112 2334466541 1345667788888899998543333
Q ss_pred ----CCCEEEEeccCCC----CHHhhchHHHHHHHHHHHHHH
Q 001990 941 ----VPGTLMIEPTESE----SKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 941 ----v~~~lris~t~~~----t~eeId~~~~~i~aL~~i~~~ 974 (985)
.++++|++++..+ +.+||+ ++++.|++++++
T Consensus 347 ~~~~~~~~lRi~~~~~~~~~~~~~di~---~~~~~l~~~~~~ 385 (402)
T cd00378 347 SSPFVPSGIRIGTPAMTTRGMGEEEME---EIADFIARALKD 385 (402)
T ss_pred CCCCCCCeeEecCHHHHHhCCCHHHHH---HHHHHHHHHHhc
Confidence 1357999988754 799999 999999987654
No 112
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.82 E-value=2.2e-18 Score=196.90 Aligned_cols=271 Identities=13% Similarity=0.137 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHHHHhCCCccc-eecChHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCcHHH---HHhcCcEE
Q 001990 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPAT---AAMCGMKI 704 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~-~~Vlv~~~~Hg~~~~~---~~~~G~~v 704 (985)
..+.++++++++++++|++... ++.+++++++..++.++... +..++ ++||++...|+++... ++..|+++
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~----~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v 115 (353)
T TIGR03235 40 AKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARA----GEQKGKKHIITSAIEHPAVLEPIRALERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHh----cccCCCCeeeEcccccHHHHHHHHHHHhcCCEE
Confidence 3456789999999999998644 44455555554444443321 11123 6788888888776544 34579999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.++.++++.+|+++|+++++ +++++|+++++ |.+|.+. |+++|+++|+++|++++||++|..+...+ +..+++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~~ivD~a~~~g~~~~-~~~~~~ 190 (353)
T TIGR03235 116 TYLPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQ-PIREIAEVLEAHEAFFHVDAAQVVGKITV-DLSADR 190 (353)
T ss_pred EEEccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceecc-CHHHHHHHHHHcCCEEEEEchhhcCCccc-cccccC
Confidence 999998889999999999997 68899999998 5799998 89999999999999999999997665443 344678
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCc--CCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~--lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~ 861 (985)
+|++++++||++ |.+|+|+++++++.... +.+..++... .++.+.+|+++.. ...+. +.+.
T Consensus 191 ~D~~~~s~~K~~------gp~g~g~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~gt~~~~~-----~~al~---~al~ 253 (353)
T TIGR03235 191 IDLISCSGHKIY------GPKGIGALVIRKRGKPKAPLKPIMFGGGQ---ERGLRPGTLPVHL-----IVGMG---EAAE 253 (353)
T ss_pred CCEEEeehhhcC------CCCceEEEEEccCcccccccCceeeCCCC---cCccccCCCChHH-----HHHHH---HHHH
Confidence 999999999986 33478999999875322 2222222110 1112334444432 11222 2233
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC
Q 001990 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (985)
Q Consensus 862 ~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~ 935 (985)
.+ .++..+..++..+++++++++|++ ++++.. .+.......+.+.++ +.+.+++.+.|.+ ||.+.
T Consensus 254 ~~-~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~-~~~~~~~~i~~~~~~------~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 254 IA-RRNAQAWEVKLRAMRNQLRDALQTLGVKLNG-DPAETIPHILNFSID------GVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred HH-HhhHHHHHHHHHHHHHHHHHHhccCCeEEeC-CcccccCCEEEEEeC------CcCHHHHHHHHhC-CeEEE
Confidence 33 246667778888999999999987 444421 111112222334433 5678899999965 77653
No 113
>PLN03032 serine decarboxylase; Provisional
Probab=99.82 E-value=8.3e-18 Score=190.69 Aligned_cols=282 Identities=12% Similarity=0.042 Sum_probs=192.8
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCcce--eeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEE
Q 001990 206 AQGRLESLLNFQTMIADLTGLPMSNA--SLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (985)
Q Consensus 206 sqg~l~~i~e~q~~ia~L~g~~~~~~--sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v 283 (985)
...+.+.+.+..+++|+|+|+++..+ .+++|||.+....+.+.+.. .++.+|+++..+|+|+.+.++.+ |+++
T Consensus 61 g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~-~~~~~vi~s~~~H~Sv~kaa~~l----g~~~ 135 (374)
T PLN03032 61 GVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARMY----RMEA 135 (374)
T ss_pred CccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh-CCCcEEEeCCCceeHHHHHHHHc----CCCC
Confidence 34667888999999999999987554 78888885543333322211 14568999999999999997653 3334
Q ss_pred EEeC--------chhhhc-cCC---CEeEEEEEcC-CCCeeeccHHHHHHHHHhCC-----cEEEEEeccccccCCC---
Q 001990 284 VVSD--------LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-----VKVVMATDLLALTILK--- 342 (985)
Q Consensus 284 ~~~~--------~~~l~~-l~~---~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g-----alliV~a~~~alg~l~--- 342 (985)
+.++ +++|++ +++ ++.+|+++.. |.+|.++|+++|+++|+++| ++++||+ ..+.+.+.
T Consensus 136 ~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDa-A~gg~~~p~~~ 214 (374)
T PLN03032 136 VKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDG-ALFGLMMPFVS 214 (374)
T ss_pred eEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEc-cchhhhhhccC
Confidence 4443 356666 544 5778888876 57999999999999999997 4899953 12222221
Q ss_pred -C---CCcccceEEEecCccccc-cCCCCCCceEEEEEchhhHhcCCCc--eeeeeecCCCCcceEEecccccccccccc
Q 001990 343 -P---PGELGADIVVGSAQRFGV-PMGYGGPHAAFLATSQEYKRMMPGR--IVGVSIDSSGKPALRVAMQTREQHIRRDK 415 (985)
Q Consensus 343 -~---p~~~GaDi~v~s~k~lg~-P~~~GGP~~G~l~~~~~~~~~lp~~--~vG~s~d~~g~~~~~l~l~tre~~~rre~ 415 (985)
. ....++|.+..+++++++ |+ ++|++++++++++.+... .++ ...+.+
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~~~Yl~-------~~d~ti------------- 269 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQNVEYLN-------SRDATI------------- 269 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccCCcccC-------CCCCcc-------------
Confidence 0 123579999999955544 75 467899998777655211 111 000111
Q ss_pred cCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCCHHHHHHHHHHc
Q 001990 416 ATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKI 495 (985)
Q Consensus 416 atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~L~~~ 495 (985)
.+|-.+..++..-..+..+|.+|++++.+++.++|+|+.++|++.| ++++..|...+|+|..+.... +. +
T Consensus 270 ----~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~~~~V~f~~~~~~~----~~-~ 339 (374)
T PLN03032 270 ----MGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNELSSTVVFERPMDEA----FI-K 339 (374)
T ss_pred ----cCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCCceEEEEcCCCcHh----Hh-h
Confidence 1111122111111225899999999999999999999999999987 887755666678887664222 22 5
Q ss_pred CceeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 496 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 496 Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
|+.+.. ..+.++++++..+|++.+|+|++.|..
T Consensus 340 ~w~l~~-~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 340 KWQLAC-EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eeeecc-cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 788775 346899999999999999999999974
No 114
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.82 E-value=1.3e-18 Score=202.21 Aligned_cols=296 Identities=18% Similarity=0.169 Sum_probs=193.0
Q ss_pred cHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEe
Q 001990 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~ 708 (985)
|..+...++++.+++++|.+. .+++++|++++++++.++..+ .+++.|+.+...|++....+...|+++..++
T Consensus 87 g~~~~~~~Le~~la~~~g~~~-~l~~~sG~~an~~ai~~l~~~------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~ 159 (402)
T TIGR01821 87 GTNIPHVELEAELADLHGKES-ALVFTSGYVANDATLATLAKI------IPGCVIFSDELNHASMIEGIRHSGAEKFIFR 159 (402)
T ss_pred CCcHHHHHHHHHHHHHhCCCe-EEEECchHHHHHHHHHHhhCC------CCCCEEEEcchHhHHHHHHHHHcCCeEEEEC
Confidence 334456789999999999765 467788888776665544311 1455566666677666666677888887776
Q ss_pred CCCCCCCCHHHHHHHHHhcCC-CeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCC-CC-----CC
Q 001990 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS-----PG 780 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~-~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~-~~-----~g 780 (985)
+ .|+++++++++..++ ++++|++++| |.+|.+. |+++|+++|+++|++++||++|..+..+- .. .+
T Consensus 160 ~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~ 233 (402)
T TIGR01821 160 H-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDG 233 (402)
T ss_pred C-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhcc
Confidence 5 388999998875433 6888999988 5799998 89999999999999999999997544221 00 11
Q ss_pred -cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHH
Q 001990 781 -YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 781 -~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
...+|+++.++.|.|+. +| |++++++++++.+.....+ ... +. . +++..++++.+.
T Consensus 234 ~~~~~div~~t~sKa~g~------~G-G~i~~~~~~~~~l~~~~~~---------~~~-t~--~----~~~~~~aaa~aa 290 (402)
T TIGR01821 234 LMHRIDIIEGTLAKAFGV------VG-GYIAASRKLIDAIRSYAPG---------FIF-TT--S----LPPAIAAGATAS 290 (402)
T ss_pred CCCCCeEEEEechhhhcc------CC-ceeecCHHHHHHHHHhCcC---------cee-cC--c----CCHHHHHHHHHH
Confidence 12368888889998843 33 6777777666544211000 000 00 1 122233444455
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH-CCCccCCC
Q 001990 860 IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTM 937 (985)
Q Consensus 860 l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e-~Gi~~~~~ 937 (985)
+..+... .+..++..++++++++.|++ ++++. ++.+.+ +.+.+.. .....++.++|.+ +||.+...
T Consensus 291 L~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---~~i~~~~-----~~~a~~~~~~L~~~~Gi~v~~~ 358 (402)
T TIGR01821 291 IRHLKES--QDLRRAHQENVKRLKNLLEALGIPVI--PNPSHI---VPVIIGD-----AALCKKVSDLLLNKHGIYVQPI 358 (402)
T ss_pred HHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHhcCCEEEEeE
Confidence 5554433 23344556788999999987 55432 111222 2222320 1135678888865 59998654
Q ss_pred CCC-C---CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 938 SWP-V---PGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 938 ~~p-v---~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.+| + .+.|||+++..+|++||| +++++|+++++++
T Consensus 359 ~~p~~~~g~~~lRis~~~~~t~edi~---~~~~~l~~~~~~~ 397 (402)
T TIGR01821 359 NYPTVPRGTERLRITPTPAHTDKMID---DLVEALLLVWDRL 397 (402)
T ss_pred CCCCCCCCCceEEEEeCCCCCHHHHH---HHHHHHHHHHHHc
Confidence 444 2 257999999999999999 9999999987753
No 115
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.82 E-value=1.2e-18 Score=196.03 Aligned_cols=294 Identities=14% Similarity=0.159 Sum_probs=202.2
Q ss_pred hhhhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 625 DQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 625 e~~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
....|..+.+.++++.||+++|.+.+ +.++||-.+|.+.+-++. .++|.|+.....|.+....+++.+.++
T Consensus 77 R~i~G~~~~h~~LE~~lA~f~g~e~a-l~f~SGy~AN~~~i~~l~--------~~~dli~~D~lnHASiidG~rls~a~~ 147 (388)
T COG0156 77 RLISGTSDLHVELEEELADFLGAEAA-LLFSSGFVANLGLLSALL--------KKGDLIFSDELNHASIIDGIRLSRAEV 147 (388)
T ss_pred CcccCCcHHHHHHHHHHHHHhCCCcE-EEEcccchhHHHHHHHhc--------CCCcEEEEechhhhhHHHHHHhCCCcE
Confidence 34567788899999999999999976 566788888866665543 356766677777877777788999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCC---CeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC---
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRD---NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--- 777 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~---~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~--- 777 (985)
+.++++ |+++|++.+.++.. +-+.|+.... ++.|.+- |+++|++++++||++++||.||+.|..|-.
T Consensus 148 ~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA-pL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG 221 (388)
T COG0156 148 RRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA-PLPELVELAEKYGALLYVDEAHAVGVLGPNGRG 221 (388)
T ss_pred EEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC-CHHHHHHHHHHhCcEEEEEccccccccCCCCcc
Confidence 999874 99999999985321 2344444443 6789997 899999999999999999999987665421
Q ss_pred CCCcC-----CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 778 SPGYI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 778 ~~g~~-----g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
..... ..||+++++.|+|+. .+|++.++..+.+++..+.-. .-.+|+ + .+..
T Consensus 222 ~~e~~g~~~~~vdi~~gTlsKAlGs-------~Gg~v~g~~~~~d~L~~~ar~---------~ifSta-l------pP~~ 278 (388)
T COG0156 222 LAEHFGLEPEEVDIIVGTLGKALGS-------SGGYIAGSAALIDYLRNRARP---------FIFSTA-L------PPAV 278 (388)
T ss_pred HHHHhCCCCccceEEEEEchhhhcc-------cCceeeCcHHHHHHHHHhCCc---------eeccCC-C------CHHH
Confidence 01112 248999999999852 347888887776655321000 001111 1 1223
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
++++.+.++.+... .+..++...++.++++.+.. ++.+. +...++. .+++.- ......+...|.++|
T Consensus 279 aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~--~s~s~I~-pv~~gd-------~~~a~~~s~~l~~~G 346 (388)
T COG0156 279 AAAALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLL--PSESPII-PVILGD-------EERALEASRALLEEG 346 (388)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccC--CCCCCee-eeEeCC-------HHHHHHHHHHHHHCC
Confidence 34445566665432 34556777888888866665 55432 1112222 222321 134678889999999
Q ss_pred CccCCCCCC-CC---CEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 932 FHGPTMSWP-VP---GTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 932 i~~~~~~~p-v~---~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
|++..+.+| || ..||+|++..+|++||+ +++++|.++
T Consensus 347 i~v~~i~~PTVp~gtarlRi~lta~ht~~~I~---~l~~~l~~~ 387 (388)
T COG0156 347 IYVSAIRPPTVPKGTARLRITLTAAHTEEDID---RLAEALSEV 387 (388)
T ss_pred eeEeeecCCCCCCCcceEEEEecCCCCHHHHH---HHHHHHHhh
Confidence 999877776 44 67999999999999999 999998764
No 116
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.82 E-value=1.2e-18 Score=200.43 Aligned_cols=309 Identities=13% Similarity=0.028 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHhCCCc--cce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH--HHhcCc-EE
Q 001990 631 QEMFNNLGEWLCTITGFDS--FSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGM-KI 704 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~--~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~--~~~~G~-~v 704 (985)
.+++++.++.+++++|.+. ..+ ..++|+.+.++++..+ . ..++..|++ ...|+..... ++..|+ ++
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l---~----~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v 118 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL---L----GARRVDHLA-WESFGSKWATDVVKQLKLEDP 118 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc---C----CCCcceEEE-eCHHHHHHHHHHHhhcCCCCc
Confidence 4578899999999999853 233 3347777665444332 1 012444544 3455543222 256799 99
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g 783 (985)
+.++.+.++.+|+++++ . ++.|.+++. |.+|++. |+++|++ |++|++++||++|+.+...+. .. .
T Consensus 119 ~~~~~~~g~~~d~~~i~-------~-~~~V~~~h~~t~tG~~~-pi~~I~~--~~~g~~~vVDa~qs~G~~pid-v~--~ 184 (378)
T PRK03080 119 RVLEADYGSLPDLSAVD-------F-DRDVVFTWNGTTTGVRV-PVARWIG--ADREGLTICDATSAAFALPLD-WS--K 184 (378)
T ss_pred eEeccCCCCCCCHhhcC-------C-CCCEEEEecCCccceec-cchhhcc--ccCCCeEEEecccccccCCCC-HH--H
Confidence 99998777788887632 1 345777775 5799999 8999999 889999999999987665542 22 2
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC----CC------CCCCCCCCCCCcccccchhhhHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GI------PAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~----~~------~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
+|++++++||||+ |.||+|++++++++.+.+.+...++.. +. .....+.+|.++.. . ..+
T Consensus 185 iD~~~~s~~K~l~-----~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~----i-~~i 254 (378)
T PRK03080 185 LDVYTFSWQKVLG-----GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPS----M-LTV 254 (378)
T ss_pred CcEEEEehhhhCC-----CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCch----H-HHH
Confidence 7999999999994 336899999998877655332222210 00 00011223333321 1 112
Q ss_pred HHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhc-c-CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC
Q 001990 854 PISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (985)
Q Consensus 854 ~~A~a~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~-~-~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~ 930 (985)
.+..++++.+.++ |+.++.++...+++++++.|++ + +.+....+.......+.+.++.. ..+. ..++...|.++
T Consensus 255 ~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~--~~~~-~~~~~~~l~~~ 331 (378)
T PRK03080 255 EDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA--QAAV-DAAAVAKLLRE 331 (378)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc--hHHH-HHHHHHHHHHc
Confidence 2223455555555 7777888889999999999987 2 33321111111111233443300 0012 23566677777
Q ss_pred CCccCCCCC-CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 931 GFHGPTMSW-PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 931 Gi~~~~~~~-pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
||.+....+ ...+.+|+|++.++|++||| +|+++|++++++++.
T Consensus 332 ~i~v~~g~~~~~~~~vRis~~~~~t~~di~---~l~~al~~~~~~~~~ 376 (378)
T PRK03080 332 NGAVDIEPYRDAPNGLRIWCGPTVEPADVE---ALTPWLDWAFERLKA 376 (378)
T ss_pred CCeeccccccCCCCcEEEecCCCCCHHHHH---HHHHHHHHHHHHHhh
Confidence 877642111 12478999999999999999 999999999887664
No 117
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.82 E-value=2e-18 Score=198.50 Aligned_cols=311 Identities=18% Similarity=0.206 Sum_probs=210.5
Q ss_pred CCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH
Q 001990 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (985)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea 243 (985)
|...++|||.+.+|....+.+. . +.+ |.+ ++..+....|+.+.+.++|+.+|+++|.+. +.+|++|..+..+
T Consensus 106 ~FsSndYLGL~~~p~v~~a~~~-a-i~~--yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~ 177 (476)
T PLN02955 106 LFSGNDYLGLSSHPTISNAAAN-A-AKE--YGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMA 177 (476)
T ss_pred EeeccCccCCCCCHHHHHHHHH-H-HHH--cCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHH
Confidence 4556789999987766666653 3 333 223 445667888999999999999999999988 7889999887777
Q ss_pred HHHHhhh-----------hcCCCCEEEEcCCCChhHHHHHHHhhcCC-CeEE---EEeCchhhhc-c---CCCEeEEEEE
Q 001990 244 MAMCNNI-----------QKGKKKTFIIASNCHPQTIDICITRADGF-DIKV---VVSDLKDIDY-K---SGDVCGVLVQ 304 (985)
Q Consensus 244 ~~~a~~~-----------~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~-gi~v---~~~~~~~l~~-l---~~~t~~V~v~ 304 (985)
++-++.. ..++++.|+.+..+|+|++..++. ++.. +.++ .+.|+++|++ + .++.+ ++|+
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~-~Vv~ 255 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVYRHCDMYHLNSLLSSCKMKRK-VVVT 255 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEeCCCCHHHHHHHHHhCCCCce-EEEE
Confidence 6654410 012567788999999999999975 3333 3444 4456777775 4 23344 4445
Q ss_pred cC--CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCCceEE
Q 001990 305 YP--GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAF 372 (985)
Q Consensus 305 ~p--n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~-----~~----GaDi~v~s~-k~lg~P~~~GGP~~G~ 372 (985)
.+ ++.|.+.|+++|.++++++|++++|| +.++.|.+..-| .+ ..||++++. |.+|. .| ||
T Consensus 256 EgV~SmdGdiapL~eL~~L~~~~ga~LiVD-EAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~---~G----Gf 327 (476)
T PLN02955 256 DSLFSMDGDFAPMEELSQLRKKYGFLLVID-DAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC---HG----GF 327 (476)
T ss_pred eCCCCCCCCcCCHHHHHHHHHHcCcEEEEc-ccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhc---cC----ce
Confidence 44 78999999999999999999999994 566777665422 23 468999996 99864 23 68
Q ss_pred EEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH--HHHcCcchHHHHHHHH
Q 001990 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY--AVYHGPEGLKTIAQRV 450 (985)
Q Consensus 373 l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y--~~~~g~~Gl~~i~~~~ 450 (985)
+++++++++.+. ..+.++|+|+...+++++++. +..+ ..+ +...+++
T Consensus 328 i~gs~~~~~~l~-----------------------------~~~~~~ifStalpp~~aaa~laal~l~-~~~-~~~r~~L 376 (476)
T PLN02955 328 IACSKKWKQLIQ-----------------------------SRGRSFIFSTAIPVPMAAAAYAAVVVA-RKE-KWRRKAI 376 (476)
T ss_pred eecHHHHHHHHH-----------------------------HhCCCCeecccccHHHHHHHHHHHHHH-hcC-HHHHHHH
Confidence 888887666541 112233333322222222221 1222 222 3467888
Q ss_pred HHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC-HHHHHHHHHHcCceeeee-----c--CCeEEEEeccCCCHHHHHH
Q 001990 451 HGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDK 522 (985)
Q Consensus 451 ~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~l~~~L~~~Gi~~~~~-----~--~~~lris~~~~~t~edid~ 522 (985)
+++.+|+++. .| +.+ ..| ..++.+..+. +.++.++|.++||++..+ + ...+|++++..||++||++
T Consensus 377 ~~n~~~fr~~---~G-~~~-~sP-I~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~ 450 (476)
T PLN02955 377 WERVKEFKAL---SG-VDI-SSP-IISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKK 450 (476)
T ss_pred HHHHHHHHHh---cC-CCC-CCC-EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHH
Confidence 8999999884 35 543 112 1123333333 788999999999988543 1 2579999999999999999
Q ss_pred HHHHHhC
Q 001990 523 LFIVFAG 529 (985)
Q Consensus 523 ll~~l~~ 529 (985)
++++|..
T Consensus 451 lv~~L~~ 457 (476)
T PLN02955 451 LITALSS 457 (476)
T ss_pred HHHHHHH
Confidence 9999974
No 118
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.81 E-value=2.3e-18 Score=196.80 Aligned_cols=296 Identities=15% Similarity=0.188 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCC-----------CCCCEEEEcCCCCCCc----HHH
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-----------HHRNVCIIPVSAHGTN----PAT 696 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~-----------~~~~~Vlv~~~~Hg~~----~~~ 696 (985)
+.++++++++++++|.+.+ +++++++.|+..+++++. ..|. .++++||++...+..+ ...
T Consensus 45 ~~~~~~~~~~a~~~g~~~~-~~~~g~t~al~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~ 119 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVEDA-VIVSSASAGIAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETM 119 (363)
T ss_pred HHHHHHHHHHHHhhCCCeE-EEEcCHHHHHHHHHHHHh----cCCCcchhhcccccccccceEEEECccchhcCCchHHH
Confidence 5678899999999998864 667777777755555442 1121 1234888877322222 345
Q ss_pred HHhcCcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEE-EEcC-CCccccccCHHHHHHHHHHcCCEEEEEcccccccc
Q 001990 697 AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (985)
Q Consensus 697 ~~~~G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vv-i~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~ 774 (985)
+.+.|+++++++. ++.+|+++++++|+ ++|++++ +++| |++|.+. |+++|+++||++|+++++|++|..
T Consensus 120 ~~~~g~~~v~v~~--~~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~~gi~vivD~a~~~--- 190 (363)
T TIGR01437 120 VRLGGGKVVEAGY--ANECSAEQLEAAIT---EKTAAILYIKSHHCVQKSML-SVEDAAQVAQEHNLPLIVDAAAEE--- 190 (363)
T ss_pred HHhcCCeEEEEcC--CCCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcC-CHHHHHHHHHHcCCeEEEECCCCC---
Confidence 6788999999876 45699999999998 7888766 4554 6788887 899999999999999999999852
Q ss_pred CCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHH
Q 001990 775 GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 775 g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
.+.....+|+|++++|+||+| +||.+|+++.++++++.+.....+. . +..+.++.+ . ..+.
T Consensus 191 ~~~~~~~~g~D~~~~S~~K~l------~gp~~G~l~~~~~~i~~~~~~~~~~-~----~~~~~~~~~-------~-~gl~ 251 (363)
T TIGR01437 191 DLQKYYRLGADLVIYSGAKAI------EGPTSGLVLGKKKYIEWVKLQSKGI-G----RAMKVGKEN-------I-LGLT 251 (363)
T ss_pred chHHHHHcCCCEEEEeCCccc------CCCceEEEEEcHHHHHHHHhccCCC-c----ceeccCHHH-------H-HHHH
Confidence 111223568999999999988 4677888888876655432111110 0 000111111 1 1222
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCC-CCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 855 ~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~-~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
+|..++...+.+-+ +...+++++++++|.+ ++.+....+ .+.......+.++. ...+.+..++.+.|.++|
T Consensus 252 aAl~~~~~~~~~~~----~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~--~~~g~~~~~l~~~L~~~~ 325 (363)
T TIGR01437 252 AALEQYLSTGKESG----AEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDE--SELGMTAADVVQALRQGE 325 (363)
T ss_pred HHHHHHHccCcccH----HHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEec--cCCCCCHHHHHHHHhcCC
Confidence 23333333333322 2233456789999986 343332111 11111122233321 013678999999999877
Q ss_pred --CccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 932 --FHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 932 --i~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
|.+... +...+.+++.+.. ++++|+| .++++|+++
T Consensus 326 ~~I~~r~~-~~~~~~~~l~~~~-~~~~e~~---~~~~~l~~~ 362 (363)
T TIGR01437 326 PAIYTRGY-KANEGIIEIDPRS-VTGGQLD---IIVERIREI 362 (363)
T ss_pred CCEEEeee-eecCCeEEEEeec-CCHHHHH---HHHHHHHHh
Confidence 444321 2225789999875 5699999 999999876
No 119
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=6.2e-18 Score=198.25 Aligned_cols=303 Identities=18% Similarity=0.125 Sum_probs=196.1
Q ss_pred HHHHHHHHhCCCc----cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH--HH----Hh--cCcEE
Q 001990 637 LGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--TA----AM--CGMKI 704 (985)
Q Consensus 637 l~~~la~l~G~~~----~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~--~~----~~--~G~~v 704 (985)
+++..+++|+.+. .+++++||+.++++++.++. .++|+|+..+..||.|.. +. .. .+..+
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~ 156 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYF 156 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--------CCCCEEEECCCCcCcchhhhhhhcccccccceEEE
Confidence 3456778899876 34567899998877777653 478889985544443322 21 11 22222
Q ss_pred E--EEeCC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC---C
Q 001990 705 V--SVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT---S 778 (985)
Q Consensus 705 ~--~v~~~-~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~---~ 778 (985)
. .++++ ++|.+|+++|++++.++ ++++|++.. +.+|... |+++|+++|+++|++++||+||..++.+.. .
T Consensus 157 ~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~-S~~s~~~-D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~ 232 (475)
T PLN03226 157 ESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGA-SAYPRDW-DYARMRKIADKVGALLMCDMAHISGLVAAQEAAS 232 (475)
T ss_pred EeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEec-CcCCCcc-CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC
Confidence 2 33444 45899999999999743 455555533 4467666 899999999999999999999987665432 2
Q ss_pred CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC---CCCCCCCCCCCcccccchhhhHHHH
Q 001990 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 779 ~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~---~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
|- .++|++++++|||| +||.+|++++++++.+.+.+...++ .+. .+..+... ..+++ ....+++
T Consensus 233 p~-~~~Div~~t~hK~L------~GP~Gg~I~~~~~~~~~~~~g~~~~-~d~~~~i~~a~~~~---~~g~p--~~~~iaa 299 (475)
T PLN03226 233 PF-EYCDVVTTTTHKSL------RGPRGGMIFFRKGPKPPKGQGEGAV-YDYEDKINFAVFPG---LQGGP--HNHTIAA 299 (475)
T ss_pred CC-CCCeEEEecCcccc------cCCCceEEEEchhhcccccCCCccH-HHHHHHhccccCCc---cCCCc--hHHHHHH
Confidence 22 36999999999999 4676688998876553332210000 000 00000001 11111 1112233
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
..+.+..+...++.++.++..+++++|++.|.+ ++.+...+. ..|.++++++. .+++..++.+.|.+.||.+
T Consensus 300 l~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t---~~hi~lv~~~~----~gi~~~~~~~~L~~~~I~~ 372 (475)
T PLN03226 300 LAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGT---DNHLVLWDLRP----LGLTGSRVEKVLDLAHITL 372 (475)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC---CCCEEEEEccC----CCCCHHHHHHHHHHCCCEE
Confidence 334556665667777788999999999999987 777754332 23567788752 3678889999999999987
Q ss_pred CCCC-----CC-CCCEEEE----eccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 935 PTMS-----WP-VPGTLMI----EPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 935 ~~~~-----~p-v~~~lri----s~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.... .| .+.+||+ ..+...+++|++ ++++.|.++++.
T Consensus 373 nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~---~ia~~i~~~~~~ 419 (475)
T PLN03226 373 NKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFE---KVAEFLHRAVTI 419 (475)
T ss_pred CCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHH---HHHHHHHHHHHH
Confidence 5321 11 2467888 445678899999 999999888874
No 120
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.81 E-value=2.5e-18 Score=197.67 Aligned_cols=300 Identities=15% Similarity=0.148 Sum_probs=195.7
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHH---Hhc---CCCCCCEEEEcCCCCCCcHHHHHhc
Q 001990 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYH---KAR---GDHHRNVCIIPVSAHGTNPATAAMC 700 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~---~~~---g~~~~~~Vlv~~~~Hg~~~~~~~~~ 700 (985)
..|+...+.++++.||+++|.+.+ +.+++|..++.+++.++..-. ... ..++++.|+.....|.+....+++.
T Consensus 142 ~~G~~~~h~~LE~~LA~f~g~e~a-ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls 220 (476)
T PLN02955 142 ICGYTTYHRLLESSLADLKKKEDC-LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLA 220 (476)
T ss_pred cccChHHHHHHHHHHHHHHCCCcE-EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhc
Confidence 345666788999999999999886 566788887766655442100 000 0123455666766676665556655
Q ss_pred ----CcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccC
Q 001990 701 ----GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 775 (985)
Q Consensus 701 ----G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g 775 (985)
+++++.++++ |+++|++++++++++.+.|++... ++.|.+- |+++|.++|++||++++||+||..+..|
T Consensus 221 ~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdia-pL~eL~~L~~~~ga~LiVDEAH~~Gv~G 294 (476)
T PLN02955 221 ERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFA-PMEELSQLRKKYGFLLVIDDAHGTFVCG 294 (476)
T ss_pred cccCCceEEEeCCC-----CHHHHHHHHHhCCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCcEEEEcccccCceec
Confidence 5788888875 999999999876555555555443 6789887 8999999999999999999999755443
Q ss_pred CCCCC---cC----CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 776 LTSPG---YI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 776 ~~~~g---~~----g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
..--| .+ ..|+++.++.|.|+. .+|++++++++++++... +. ....++ +.
T Consensus 295 ~~G~G~~e~~g~~~di~ii~~TLsKA~G~-------~GGfi~gs~~~~~~l~~~--~~-------~~ifSt---al---- 351 (476)
T PLN02955 295 ENGGGVAEEFNCEADVDLCVGTLSKAAGC-------HGGFIACSKKWKQLIQSR--GR-------SFIFST---AI---- 351 (476)
T ss_pred CCCCcHHHHhCCCCCCcEEEEeCccchhc-------cCceeecHHHHHHHHHHh--CC-------CCeecc---cc----
Confidence 21111 12 468999999998742 357888888766554311 00 000111 10
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
.+..++++.+.+..+-.+ .+..++..++.+++++.+ ++.+ . .+.. .+++.. ......+.++|.
T Consensus 352 pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~--G~~~--~---sPI~-pI~ig~-------~~~a~~~~~~L~ 414 (476)
T PLN02955 352 PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS--GVDI--S---SPII-SLVVGN-------QEKALKASRYLL 414 (476)
T ss_pred cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc--CCCC--C---CCEE-EEEeCC-------HHHHHHHHHHHH
Confidence 112233334444444222 234567788888888742 4432 1 1222 222221 234567899999
Q ss_pred HCCCccCCCCCC-CC---CEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 929 DYGFHGPTMSWP-VP---GTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 929 e~Gi~~~~~~~p-v~---~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
++||++..+.+| || ..+||+++..||++||| +++++|.++.+...
T Consensus 415 ~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId---~lv~~L~~~~~~~~ 463 (476)
T PLN02955 415 KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVK---KLITALSSCLDFDN 463 (476)
T ss_pred HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHH---HHHHHHHHHHhhhc
Confidence 999999877777 43 46999999999999999 99999998876543
No 121
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.81 E-value=4.6e-19 Score=182.81 Aligned_cols=310 Identities=14% Similarity=0.153 Sum_probs=217.9
Q ss_pred CCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH
Q 001990 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (985)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea 243 (985)
|.+.+||+|...+|..+++..+ .++. |. .+|-..+...|+...+.+++..||++-+-+. ..+|+++-.+..+
T Consensus 71 nFcaNnYLGLsshPeii~a~~~--alee--yG--aGlssvrfIcGtq~iHk~LE~kiAqfh~rED--~ilypscfdANag 142 (417)
T KOG1359|consen 71 NFCANNYLGLSSHPEIINAGQK--ALEE--YG--AGLSSVRFICGTQDIHKLLESKIAQFHGRED--TILYPSCFDANAG 142 (417)
T ss_pred eecccccccccCChHHHHHHHH--HHHH--hC--CCccceeEEecchHHHHHHHHHHHHHhCCCc--eEEeccccccchH
Confidence 6678899999999888888764 3442 21 1555667789999999999999999999888 5566655444333
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-c---CCCEeEEEEEcC--CCCeeeccHHH
Q 001990 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SGDVCGVLVQYP--GTEGEVLDYGD 317 (985)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l---~~~t~~V~v~~p--n~~G~i~dl~~ 317 (985)
++-|+ .+ +.|-|+.++.+|.|+++.++. |+ ...++|+-+++. + .+--.-+++|.. ++.|.+.|+++
T Consensus 143 ~feai-l~--pedAvfSDeLNhASIIdGirL-ck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 143 AFEAI-LT--PEDAVFSDELNHASIIDGIRL-CK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred HHHHh-cC--hhhhhhccccccchhhhhhHH-Hh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHH
Confidence 33333 12 778899999999999999865 65 334555555553 1 122234566765 78999999999
Q ss_pred HHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCce
Q 001990 318 FIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (985)
Q Consensus 318 I~~~a~~~galliV~a~~~alg~l~~p~-----~~----GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~ 387 (985)
|++++++||++++++ +.++.|++...| ++ .+||+.++. |.+|+. +.||..+.+.++..+
T Consensus 215 i~~La~kYgaLlfiD-ecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga------~GGyttgp~~li~ll---- 283 (417)
T KOG1359|consen 215 ISQLAKKYGALLFID-ECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA------SGGYTTGPKPLISLL---- 283 (417)
T ss_pred HHHHHHhcCcEEEEe-ecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC------CCCCccCChhHHHHH----
Confidence 999999999999994 456666654332 23 379988886 988643 336777776665544
Q ss_pred eeeeecCCCCcceEEecccccccccccccCCCccchhHH---HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC
Q 001990 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL---LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (985)
Q Consensus 388 vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l---~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 464 (985)
|.++.+++++|+.. .+..+.+|..++.. .++..+...+++++++..+..
T Consensus 284 -------------------------rqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 284 -------------------------RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred -------------------------HhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 23344556665444 34444445455543 455566778899999999888
Q ss_pred CCEEEcCC-CCcceEEEecCC-HHHHHHHHHHcCceee-----eec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 465 GTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLR-----VVD--SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 465 g~~~~~~~-~~~~~~~i~~~~-~~~l~~~L~~~Gi~~~-----~~~--~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
| |++.+. .+..++.+.... +...++.|.++||++- .++ ...+|+-++..||+||||+++++|.+
T Consensus 336 G-ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359|consen 336 G-FTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred C-ceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHH
Confidence 8 998753 223355554444 8889999999999872 222 35789999999999999999999974
No 122
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.81 E-value=1.2e-17 Score=193.04 Aligned_cols=284 Identities=17% Similarity=0.117 Sum_probs=194.6
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe
Q 001990 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~ 286 (985)
.+....+.++++.+|+++|++. +.+++|+|.++.+++.++ .. +||+|++++..|.+....++ ..|++++.+
T Consensus 59 ~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l-~~--~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v 129 (387)
T PRK09331 59 QIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSL-CK--KGDYVVLDGLAHYTSYVAAE----RAGLNVREV 129 (387)
T ss_pred cccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHh-cC--CCCEEEECCCchHHHHHHHH----HcCCEEEEE
Confidence 3344568899999999999976 667899998888777665 23 88999999999999987653 357888777
Q ss_pred Cc----------hhhhc-cC-------CCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCc
Q 001990 287 DL----------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGE 346 (985)
Q Consensus 287 ~~----------~~l~~-l~-------~~t~~V~v~~pn-~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~ 346 (985)
+. +++++ +. +++++|++++|+ .+|.+.|+++|+++||++|++++||+ .++.|.++ +..+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~-a~~~g~~~~~~~~ 208 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNG-AYTVGRMPVDGKK 208 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEEC-CcccCCcCCCHHH
Confidence 54 34444 43 378999999985 59999999999999999999999953 55666543 3457
Q ss_pred ccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhH
Q 001990 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (985)
Q Consensus 347 ~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~ 425 (985)
+|+|++++++ |+|++ +|++||+++++++++.+... .+.|... . ......|++. .+
T Consensus 209 ~g~D~~~~s~~K~l~~-----~~~~G~l~~~~~~i~~~~~~----------~~~~~~~---~---~~~~~~~~~~---~~ 264 (387)
T PRK09331 209 LGADFIVGSGHKSMAA-----SAPSGVLATTEEYADKVFRT----------SRKFGVK---E---VELLGCTLRG---AP 264 (387)
T ss_pred cCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhcccc----------cCCCccc---c---eeeeceecCc---hH
Confidence 9999999998 77753 35689999999887765211 0111100 0 0000111111 24
Q ss_pred HHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC-CCcc-eEEEecCC-----------HHHHHHH
Q 001990 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFD-TVKVKCAD-----------AHAIASA 491 (985)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~-~~~~-~~~i~~~~-----------~~~l~~~ 491 (985)
.+++++++. .+- +-+ +..++.++++++++++|+++ | ++++.+ +... .+.+..+. +.++.++
T Consensus 265 ~~~~~aal~--~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
T PRK09331 265 LVTLMASFP--HVV-ERV-KRWDEEVKKARWFVDELEKIEG-FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEE 339 (387)
T ss_pred HHHHHHHHH--HHH-HHH-HHHHHHHHHHHHHHHHHhcCCC-EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHH
Confidence 444455541 111 112 24556678999999999999 6 998842 1111 22233221 3569999
Q ss_pred HHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 492 L~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
|.++||.......+.++...+..+|++|+++++++|+.
T Consensus 340 L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~ 377 (387)
T PRK09331 340 LKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKE 377 (387)
T ss_pred HHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHH
Confidence 99999974332345666666777899999999999974
No 123
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.81 E-value=3e-18 Score=195.51 Aligned_cols=301 Identities=14% Similarity=0.078 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~- 711 (985)
...++++.+++++|.+.. +++++|++++..++.+++ ..++++||++...|..+...+...|++++.+++++
T Consensus 19 ~~~~~~~~la~~~~~~~~-~~~~sgt~al~~~l~~l~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKYA-VAVSSGTAALHLALRALG-------IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHcC-------CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCC
Confidence 466899999999998654 456677776654444331 13678999999888777667788999999999987
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCC-CCcCCCcEEEeC
Q 001990 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~-~g~~g~Di~~~s 790 (985)
++.+|+++++++++ +++++|++++ .+|... |+++|.++|+++|+++++|++|..+...... .+.+ .|+.++|
T Consensus 91 ~~~~d~~~l~~~i~---~~~~~v~~~~--~~G~~~-~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~-~d~~~~S 163 (352)
T cd00616 91 TYNIDPELIEAAIT---PRTKAIIPVH--LYGNPA-DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTF-GDAGAFS 163 (352)
T ss_pred cCCcCHHHHHHhcC---cCCeEEEEEC--CCCCcC-CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccC-cceeEEc
Confidence 68899999999986 7899999876 468887 8999999999999999999999654322111 1222 5778888
Q ss_pred Cc--ccccccCCCCCCcceeeeec-ccccCcCCCCc-cccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 791 LH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHP-VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 791 ~h--Ktl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~-~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+| |+|+ ++.+|+++++ +++.+.+.... .+.... .+.....+.+... +.. .+.++. .....+
T Consensus 164 ~~~~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~-~~~aa~---~~~~l~ 228 (352)
T cd00616 164 FHPTKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRD--RFKYEHEILGYNY---RLS-EIQAAI---GLAQLE 228 (352)
T ss_pred CCCCCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCC--CCccccceeeecc---CcC-HHHHHH---HHHHHH
Confidence 66 9872 2335666665 35443321100 010000 0000011111100 010 111111 112234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCC-CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCC--
Q 001990 867 GLTEASKIAILNANYMAKRLEK--HYPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~-~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv-- 941 (985)
++.+..++..++++++++.|.+ ++++....+. ......+.+.++. ..+.+..++.+.|.++||.++....|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gI~~~~~~~~~~~ 305 (352)
T cd00616 229 KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDP---EAGESRDELIEALKEAGIETRVHYPPLHH 305 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECC---cCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence 4556666778889999999987 3444322111 1122334444431 014678899999999999765322110
Q ss_pred ----------------------CCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 942 ----------------------PGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 942 ----------------------~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
.+.+|++++..+|++||+ +++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~---~i~~~l~ 352 (352)
T cd00616 306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEID---RVIEALR 352 (352)
T ss_pred CHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHH---HHHHHhC
Confidence 157999999999999999 9998874
No 124
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.81 E-value=1.9e-17 Score=190.31 Aligned_cols=285 Identities=17% Similarity=0.155 Sum_probs=192.9
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
..+|+...+.++++.+|+++|++. +.+++|++.++.+++.++. . ++|+|+++...|.+....+ +..|++++
T Consensus 45 ~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~-~--~gd~Vl~~~~~h~s~~~~~----~~~g~~~~ 115 (370)
T TIGR02539 45 LDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALC-K--EGDWVVLDGLAHYTSYVAA----ERAGLNVK 115 (370)
T ss_pred cccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhh-C--CCCEEEECCcccHHHHHHH----HHcCCEEE
Confidence 456666778888899999999987 5568999988888877763 3 7899999999998887654 34677777
Q ss_pred EeCc----------hhhhc-cC-------CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CC
Q 001990 285 VSDL----------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 344 (985)
Q Consensus 285 ~~~~----------~~l~~-l~-------~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p 344 (985)
.++. +++++ ++ +++++|++++| |++|.+.|+++|+++||++|++++|| +.++.|.+. +.
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD-ea~~~g~~~~~~ 194 (370)
T TIGR02539 116 EVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN-CAYTVGRMPVSA 194 (370)
T ss_pred EEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE-CccccCCcCCCH
Confidence 6643 45554 43 36889999998 57999999999999999999999995 355666543 33
Q ss_pred CcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccch
Q 001990 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (985)
Q Consensus 345 ~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~ 423 (985)
..+++|+++++. |+++. || ++||+++++++++.+...... |.+.. .....+|++.
T Consensus 195 ~~~~~di~v~s~sK~~~~----~g-~~G~l~~~~~~i~~l~~~~~~----------~~~~~------~~~~~~~~~~--- 250 (370)
T TIGR02539 195 KEIGADFIVGSGHKSMAA----SG-PCGVLGMSEEWEDIVLRKSRY----------SPVKE------VELLGCTSRG--- 250 (370)
T ss_pred HHcCCCEEEeeCcccccC----CC-CEEEEEECHHHHhhhcccccC----------Cccce------eeeecccccc---
Confidence 468899999998 87752 33 389999999988876321111 11100 0000122221
Q ss_pred hHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCcceEEEecCC-----------HHHHHH
Q 001990 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-----------AHAIAS 490 (985)
Q Consensus 424 ~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~~~~~i~~~~-----------~~~l~~ 490 (985)
.+..+..+++ ... .+-+++ .++..+++++++++|+++| ++++. ++..+.+.++.+. +..+.+
T Consensus 251 ~~~~~~~~al--~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T TIGR02539 251 APIVTMMASF--PHV-VERVKR-WDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYE 325 (370)
T ss_pred cHHHHHHHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHH
Confidence 1222333332 111 122222 2344566789999999998 88752 2222233344332 346999
Q ss_pred HHHHcCce-eeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 491 AAYKIEMN-LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 491 ~L~~~Gi~-~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+|.++||. ++.-.++.+|++++ ..|++|+++++++|..
T Consensus 326 ~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~ 364 (370)
T TIGR02539 326 ELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFEE 364 (370)
T ss_pred HHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHHH
Confidence 99999997 55322468999984 6799999999999974
No 125
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=7e-18 Score=197.08 Aligned_cols=292 Identities=19% Similarity=0.200 Sum_probs=190.2
Q ss_pred HHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH-----HHhcCcEEEEEeCCC
Q 001990 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (985)
Q Consensus 637 l~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~-----~~~~G~~v~~v~~~~ 711 (985)
+++.+++++|.+...+.+++|++++.+++.++ . +++++||++...|+.+... ....|++++.++++.
T Consensus 76 ~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l---~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 147 (416)
T PRK00011 76 AIDRAKELFGAEYANVQPHSGSQANAAVYFAL---L-----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE 147 (416)
T ss_pred HHHHHHHHhCCCceeeecCCchHHHHHHHHHh---c-----CCCCEEEEeccccCCccccccccccccceeeEeecCcCc
Confidence 56699999999876666677877664443332 1 4678999999888765322 123467888888874
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCC---CCCCcCCCcEE
Q 001990 712 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TSPGYIGADVC 787 (985)
Q Consensus 712 -~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~---~~~g~~g~Di~ 787 (985)
++.+|++++++++++ .++++|+++.+ .+|... |+++|+++|+++|+++++|++|..+.... ..+-. ++|++
T Consensus 148 ~~~~~d~~~l~~~i~~--~~~k~v~~~~~-~~~~~~-~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 148 ETGLIDYDEVEKLALE--HKPKLIIAGAS-AYSRPI-DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred ccCCcCHHHHHHHHHh--cCCCEEEECCC-cCCCcc-CHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 588999999999973 36778887654 356655 89999999999999999999986544321 11222 68999
Q ss_pred EeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++|+||+| +||.+|+++++ +++.+.+..... .++ ..+ +. ....++ ....+.....+
T Consensus 223 ~~S~~K~l------~g~~gg~i~~~~~~~~~~l~~~~~------------~~~--~~~-~~-~~~~aa-~~~a~~~~~~~ 279 (416)
T PRK00011 223 TTTTHKTL------RGPRGGLILTNDEELAKKINSAVF------------PGI--QGG-PL-MHVIAA-KAVAFKEALEP 279 (416)
T ss_pred EecCCcCC------CCCCceEEEeCCHHHHHHHHHHhC------------ccc--cCC-cc-HHHHHH-HHHHHHHHHhh
Confidence 99999987 35777888885 465544321100 000 000 00 111111 12222222345
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC------C
Q 001990 867 GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS------W 939 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~------~ 939 (985)
++.+..++..++++++++.|++ ++++...+ ...+.+.+.+++ .+.+..++.+.|.++||.+.... .
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~i~~~~----~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~ 352 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERGFRVVSGG---TDNHLVLVDLRS----KGLTGKEAEAALEEANITVNKNAVPFDPRS 352 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeeecC---CCCeEEEEeCcc----cCCCHHHHHHHHHHcCcEEccCcCCCCCCC
Confidence 6677778889999999999987 55543211 112334455531 13466789999999999875321 1
Q ss_pred C-CCCEEEEeccC----CCCHHhhchHHHHHHHHHHHHHH
Q 001990 940 P-VPGTLMIEPTE----SESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 940 p-v~~~lris~t~----~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
| .+..+|++... ..|++|++ +++++|++++..
T Consensus 353 ~~~~~~~Ri~~~~~~~~~~t~~di~---~l~~~l~~~~~~ 389 (416)
T PRK00011 353 PFVTSGIRIGTPAITTRGFKEAEMK---EIAELIADVLDN 389 (416)
T ss_pred CCCCCceEecCHHHhhcCcCHHHHH---HHHHHHHHHHhc
Confidence 1 24578986533 46799999 999999987653
No 126
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=8e-18 Score=193.27 Aligned_cols=332 Identities=14% Similarity=0.126 Sum_probs=212.9
Q ss_pred ccccccceecccCcccccccc-----ccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCc--cc-eec-ChHHHH
Q 001990 590 SMIPLGSCTMKLNATTEMMPV-----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FS-LQP-NAGAAG 660 (985)
Q Consensus 590 ~~~~lGs~~~~~~~~~~~~~~-----~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~--~~-~~~-~sGa~g 660 (985)
.++.||.|.+.++.+.+.... ..+.+ .|+| .+|..++.+.+.+++.+.+|.+. .. +.+ +++++|
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~------~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~a 101 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP------SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEA 101 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHH
Confidence 467888888877776655542 22222 3443 47888888888888888888432 22 444 455555
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC---CCCCCCHHHHHHHHHhcCCCeEEEEEE
Q 001990 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD---AKGNINIEELRKAAEANRDNLSTLMVT 737 (985)
Q Consensus 661 ~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~---~~g~iDle~L~~~i~~~~~~t~~Vvi~ 737 (985)
...+++++. +++|+||++++.+..+.....+.|.+++.++++ .++.+|+++|+++++ ++|++|+++
T Consensus 102 l~~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~i~ln 170 (393)
T COG0436 102 LFLAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKAIILN 170 (393)
T ss_pred HHHHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceEEEEe
Confidence 544444432 578999999998888888899999999999975 368999999999998 799999999
Q ss_pred cC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccc-cccC--CCCCCcC----CCcEEEeCCcccccccCCCCCCcce
Q 001990 738 YP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--LTSPGYI----GADVCHLNLHKTFCIPHGGGGPGMG 807 (985)
Q Consensus 738 ~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~-~~~g--~~~~g~~----g~Di~~~s~hKtl~~p~g~GGPg~G 807 (985)
+| |+||.+- +.+++|+++|++||++++.|+++.. ...+ ....... ..-|.+.|++|+|++ .|+++|
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m----tGwRvG 246 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM----TGWRIG 246 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc----ccccee
Confidence 99 5799886 3599999999999999999998731 1111 1111111 123556788888865 589999
Q ss_pred eeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHH
Q 001990 808 PIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKR 885 (985)
Q Consensus 808 ~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg-~~gl~~~~~~~~~~a~~l~~~ 885 (985)
+++++ +++++.+.. +. ....+|.+...|. +|.++|..-. .+.+....+...++++.+.+.
T Consensus 247 ~~v~~~~~l~~~~~~-~~-------------~~~~~~~~~~~Q~----aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~ 308 (393)
T COG0436 247 WVVGPPEELIAALRK-LK-------------SYLTSCAPTPAQY----AAIAALNGPQSDEVVEEMREEYRERRDLLVEA 308 (393)
T ss_pred EeecChHHHHHHHHH-HH-------------HhcccCCCHHHHH----HHHHHhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99998 655544320 00 0111222111222 1222222111 123344445667888999999
Q ss_pred Hhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC-CCccC-CCCCC---CCCEEEEeccCCCCHHhh
Q 001990 886 LEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGP-TMSWP---VPGTLMIEPTESESKVCH 958 (985)
Q Consensus 886 L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~-Gi~~~-~~~~p---v~~~lris~t~~~t~eeI 958 (985)
|.+. +.+.. .+++.++ +.++++. ..+..+++..|.++ |+.+. ...|. ..+.+|+|... +.+++
T Consensus 309 l~~~~g~~~~~-~p~Ga~Y--~~~~i~~-----~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~--~~~~l 378 (393)
T COG0436 309 LNEIGGLSVVK-PPEGAFY--LFPKIPE-----LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT--SEETL 378 (393)
T ss_pred HHhcCCeeecc-CCCeeEE--EEeecCC-----CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec--CHHHH
Confidence 9873 44432 1223332 2344431 25788999988765 78763 32232 24789999864 34777
Q ss_pred chHHHHHHHHHHHHHH
Q 001990 959 NREDLFFQILLSLTKF 974 (985)
Q Consensus 959 d~~~~~i~aL~~i~~~ 974 (985)
+ +.++.+.+.++.
T Consensus 379 ~---~a~~rl~~~~~~ 391 (393)
T COG0436 379 E---EALRRLARFLAE 391 (393)
T ss_pred H---HHHHHHHHHHHh
Confidence 7 777777766543
No 127
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.80 E-value=4.5e-18 Score=198.27 Aligned_cols=291 Identities=17% Similarity=0.165 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
...++++.+++++|.+. .+++++|++++..++.++.. ..+++.|+++...|++....+...|.+++.++.+
T Consensus 92 ~~~~Le~~la~~~g~~~-~i~~~sG~~a~~~~i~~l~~------~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-- 162 (410)
T PRK13392 92 PHVLLERELADLHGKES-ALLFTSGYVSNDAALSTLGK------LLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-- 162 (410)
T ss_pred HHHHHHHHHHHHhCCCC-EEEECcHHHHHHHHHHHHhc------CCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC--
Confidence 46689999999999764 46777888766555443211 1245777777777877766677889998877653
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCC------CC-cCC
Q 001990 713 GNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS------PG-YIG 783 (985)
Q Consensus 713 g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~------~g-~~g 783 (985)
|.+++++.+++.. +++++|++++| |++|.+. |+++|.++|+++|+++++|++|..+..+... ++ ...
T Consensus 163 ---d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~ 238 (410)
T PRK13392 163 ---DLADLEEQLASVDPDRPKLIAFESVYSMDGDIA-PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDR 238 (410)
T ss_pred ---CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCC
Confidence 6777887776432 57899999998 5799987 8999999999999999999999744422100 11 124
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHh
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~l 863 (985)
+|+++.+++|+|+. +| |++++++++++.+.....+ .. .+... .+..+.++.+.+..+
T Consensus 239 ~div~~tlsK~~g~------~G-G~~~~~~~~~~~l~~~~~~-----------~~-~s~~~----~~~~~~a~~aaL~~~ 295 (410)
T PRK13392 239 IDMIQGTLAKAFGC------LG-GYIAASADLIDFVRSFAPG-----------FI-FTTAL----PPAVAAGATAAIRHL 295 (410)
T ss_pred CcEEEEEChHhhhc------cc-chhhcCHHHHHHHHHhCcc-----------hh-ccCcC----CHHHHHHHHHHHHHH
Confidence 68988999999853 33 6777777665533211000 00 00011 112223333445544
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCccCCCCCC-
Q 001990 864 GSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMSWP- 940 (985)
Q Consensus 864 g~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~~~~~~~p- 940 (985)
...+ +..++..++++++++.|++ ++++. ++ ...+ +.+.+. .+.+..+++++|. ++||.+....+|
T Consensus 296 ~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~~---~~i~~~-----~~~~~~~~~~~L~~~~GI~v~~~~~p~ 363 (410)
T PRK13392 296 KTSQ--TERDAHQDRVAALKAKLNANGIPVM-PS-PSHI---VPVMVG-----DPTLCKAISDRLMSEHGIYIQPINYPT 363 (410)
T ss_pred hcCH--HHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCCE---EEEEeC-----CHHHHHHHHHHHHHhCCEEEeeeCCCC
Confidence 3322 3345567788999999987 55542 21 1222 223332 0123568899886 679998654444
Q ss_pred C---CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 941 V---PGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 941 v---~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+ ...+|++++..+|++|+| +++++|+++.++
T Consensus 364 ~~~~~~~lRis~~~~~t~edid---~l~~aL~~~~~~ 397 (410)
T PRK13392 364 VPRGTERLRITPTPLHDDEDID---ALVAALVAIWDR 397 (410)
T ss_pred CCCCCceEEEEECCCCCHHHHH---HHHHHHHHHHHH
Confidence 2 258999999999999999 999999998765
No 128
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.80 E-value=5.9e-18 Score=196.94 Aligned_cols=292 Identities=16% Similarity=0.177 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~ 711 (985)
+...++++.+++++|.+. .++++||++++++++.++.. . .+++.|++...+|++....+...|.+++.++.
T Consensus 90 ~~~~~le~~la~~~g~~~-~~~~~SG~~An~~ai~~l~~-----~-~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-- 160 (406)
T PRK13393 90 HYHVLLEAELADLHGKEA-ALLFTSGYVSNWAALSTLGS-----R-LPGCVILSDELNHASMIEGIRHSRAEKRIFRH-- 160 (406)
T ss_pred HHHHHHHHHHHHHhCCCc-EEEeCCcHHHHHHHHHHhhc-----C-CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC--
Confidence 457789999999999765 46777888777665553321 1 24566777778888777777778888888876
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccC-CCC-----CC-cC
Q 001990 712 KGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LTS-----PG-YI 782 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g-~~~-----~g-~~ 782 (985)
.|++++++.++... +++++|+++++ |.+|.+. |+++|.++|+++|+++++|++|..+..+ ... .+ ..
T Consensus 161 ---~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~ 236 (406)
T PRK13393 161 ---NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLAD 236 (406)
T ss_pred ---CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCC
Confidence 38899998886442 36788888887 5789998 8999999999999999999999755522 110 11 11
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHH
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~ 862 (985)
.+|+++.++.|.|+. +| |++++++++.+.+.... +....++ + +.+..++++.+.+..
T Consensus 237 ~~~i~~~tlsKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~~t~-~----~~p~~~aa~~aaL~~ 293 (406)
T PRK13393 237 RLTIIEGTLAKAFGV------MG-GYITGSAALCDFIRSFA-----------SGFIFTT-S----LPPAVAAGALASVRH 293 (406)
T ss_pred CCeEEEEeCchhhcc------cC-ceeeCCHHHHHHHHHhC-----------cCceecC-c----cCHHHHHHHHHHHHH
Confidence 258888888898853 22 67777766654432110 0000000 0 122223334455555
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH-CCCccCCCCCC
Q 001990 863 MGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWP 940 (985)
Q Consensus 863 lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e-~Gi~~~~~~~p 940 (985)
+...+. ..++..++++++++.|++ ++++. .+ .+++ +.+.+. ...+..++.++|.+ +||.+....+|
T Consensus 294 ~~~~~~--~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~i---~~v~~~-----~~~~~~~l~~~L~~~~Gi~v~~~~~p 361 (406)
T PRK13393 294 LKASSA--ERERHQDRVARLRARLDKAGIPHL-PN-PSHI---VPVMVG-----DPVLCKQISDELLDRYGIYVQPINYP 361 (406)
T ss_pred HhhCHH--HHHHHHHHHHHHHHHHHHcCCCcC-CC-CCCe---EEEEeC-----CHHHHHHHHHHHHHhCCEEEEeECCC
Confidence 433322 224556778899999987 55432 22 1222 222222 01235678899987 59998654444
Q ss_pred -C---CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 941 -V---PGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 941 -v---~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+ .+.||++++.++|++|+| +++++|++++++
T Consensus 362 ~~p~g~~~iRis~~~~~t~edid---~l~~~l~~~~~~ 396 (406)
T PRK13393 362 TVPRGTERLRITPSPLHTDADIE---HLVQALSEIWAR 396 (406)
T ss_pred CCCCCCceEEEEECCCCCHHHHH---HHHHHHHHHHHh
Confidence 2 267999999999999999 999999998765
No 129
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.80 E-value=2.9e-18 Score=195.66 Aligned_cols=314 Identities=13% Similarity=0.083 Sum_probs=204.4
Q ss_pred CCCCcHHHHHHHHhCCccccccC---CChhhHh---hHHHHHHHHHHHHHHHhhCCC-Ccceeeccc-hHHHHHHHHHHh
Q 001990 177 NTHVPPVILRNIMENPAWYTQYT---PYQAEIA---QGRLESLLNFQTMIADLTGLP-MSNASLLDE-GTAAAEAMAMCN 248 (985)
Q Consensus 177 ~~~~p~~v~~~i~~~~~~~t~~~---py~~e~s---qg~l~~i~e~q~~ia~L~g~~-~~~~sl~~~-~ta~~ea~~~a~ 248 (985)
|..+|+.|.+++.. ++..|+ -...+++ ....+.+.+.++.+++|+|++ ..++.++.| +|.++++++.++
T Consensus 7 p~~~p~~V~~a~~~---~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 7 PAALPEEVLEQAQK---ELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCHHHHHHHHH---HHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 45677777655543 232221 1111123 344577889999999999984 456777767 999999988776
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch------h---hh-c-cCCCEeEEEEEc-CCCCeeeccHH
Q 001990 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------D---ID-Y-KSGDVCGVLVQY-PGTEGEVLDYG 316 (985)
Q Consensus 249 ~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~------~---l~-~-l~~~t~~V~v~~-pn~~G~i~dl~ 316 (985)
....+++++|++....|.+ ..+++..|+++++++.+ + ++ . +++++++|.+++ .|.+|.+.+
T Consensus 84 ~~~~~~~~~i~~g~~~~~~-----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-- 156 (355)
T cd00611 84 LGDKGTADYVVTGAWSAKA-----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-- 156 (355)
T ss_pred CCCCCeEEEEECCHHHHHH-----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--
Confidence 3211255666553333322 22355678877776532 2 12 2 567899998876 589999732
Q ss_pred HHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCC
Q 001990 317 DFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 395 (985)
Q Consensus 317 ~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~ 395 (985)
++++.+|++++||+ ..++|..+ +..++|+ ++.++|++.+| ||+|++++++++++++++....
T Consensus 157 ---~i~~~~g~~~~VDa-~qs~g~~~idv~~~~~--~~ss~~K~lGP-----~G~g~l~~~~~~~~~~~~~~~~------ 219 (355)
T cd00611 157 ---EVPDTGGVPLVADM-SSNILSRPIDVSKFGV--IYAGAQKNLGP-----AGVTVVIVRKDLLGKARKITPS------ 219 (355)
T ss_pred ---eecccCCCeEEEEc-cccccCCCCCHHHhCE--EEeecccccCC-----CceEEEEECHHHHhhcccCCCC------
Confidence 34455999999954 34566543 3456664 45556555334 6799999999999887653211
Q ss_pred CCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcC-CCEE-EcCC
Q 001990 396 GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GTVE-VQGL 472 (985)
Q Consensus 396 g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~-g~~~-~~~~ 472 (985)
.+.+.+.... ....+|+|+ .+++++.+++ .++..+ |++++.+|+.+++++++++|+++ | +. ...+
T Consensus 220 -----~~~~~~~~~~-~~~~~Tpn~---~~i~~L~aal--~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~~ 287 (355)
T cd00611 220 -----MLNYKTHADN-NSLYNTPPT---FAIYMMGLVL--KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPVD 287 (355)
T ss_pred -----cccHHHHHhc-CCCCCCChH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCCC
Confidence 0011000000 012478887 7888888887 677777 79999999999999999999999 6 63 2211
Q ss_pred --CCcc-eEEEecCC---HHHHHHHHHHcCceeeee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 473 --PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 473 --~~~~-~~~i~~~~---~~~l~~~L~~~Gi~~~~~--~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.... .++|+.++ ..++.+.+.+.|+..+.. ..+.+|+|+..+||++|||+|+++|+.
T Consensus 288 ~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 288 KRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred HHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 1232 37777665 355556777899975433 247899999999999999999999974
No 130
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.80 E-value=6e-18 Score=197.04 Aligned_cols=294 Identities=17% Similarity=0.162 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC
Q 001990 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~ 710 (985)
.+...++++.+++++|.+. .+++++|++++.+++.++..+ .+++.|+.....|++....+...|+++..++.
T Consensus 90 ~~~~~~l~~~la~~~g~~~-~~~~~sG~~an~~ai~~l~~~------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~- 161 (407)
T PRK09064 90 NHYHVELERELADLHGKEA-ALVFTSGYVSNDATLSTLAKL------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH- 161 (407)
T ss_pred HHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHHHHHHhCC------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-
Confidence 4467789999999999654 466778887765555544321 24454444545565555556677888777765
Q ss_pred CCCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccC-CCC-----CC-c
Q 001990 711 AKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LTS-----PG-Y 781 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g-~~~-----~g-~ 781 (985)
.|++++++++++.. +++++|++++| |.+|.+. |+++|.++|+++|++++||++|..+..+ ... .+ .
T Consensus 162 ----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~ 236 (407)
T PRK09064 162 ----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM 236 (407)
T ss_pred ----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC
Confidence 38899999887443 46889999988 5789988 8999999999999999999999644321 100 11 1
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~ 861 (985)
..+|+++.+++|.|+. +| |++++++++++.+.....+ ....+ .. .+..+.++.+.+.
T Consensus 237 ~~~div~~t~sKa~g~------~G-G~~~~~~~~~~~l~~~~~~-----------~~~t~-~~----~~~~~~aa~~al~ 293 (407)
T PRK09064 237 DRIDIIEGTLAKAFGV------MG-GYIAGSAALVDAVRSYAPG-----------FIFTT-SL----PPAIAAAALASIR 293 (407)
T ss_pred CCCeEEEEecchhhhc------cC-ceEecCHHHHHHHHHhCcc-----------ccccC-cC----CHHHHHHHHHHHH
Confidence 2468998899999843 22 7788887665543210000 00000 11 1222333445555
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH-CCCccCCCCC
Q 001990 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSW 939 (985)
Q Consensus 862 ~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e-~Gi~~~~~~~ 939 (985)
.+...+ ...++..++++++.+.|++ ++++. ++...+ +.+.+.. .....++.++|.+ +||.+..+.+
T Consensus 294 ~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---v~i~~~~-----~~~~~~l~~~L~~~~gi~v~~~~~ 361 (407)
T PRK09064 294 HLKESN--EERERHQERAAKLKAALDAAGIPVM--PNESHI---VPVMVGD-----PEKCKKASDMLLEEHGIYVQPINY 361 (407)
T ss_pred HHhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHhCCEEEeeECC
Confidence 554332 2345677888999999987 55542 111221 2233320 1245788998875 6999865544
Q ss_pred C-CC---CEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 940 P-VP---GTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 940 p-v~---~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
| ++ +.+||+++..+|++|+| +++++|+++++++
T Consensus 362 p~~~~~~~~lRis~~~~~t~edi~---~l~~~l~~~~~~~ 398 (407)
T PRK09064 362 PTVPRGTERLRITPTPFHTDEMID---HLVEALVEVWARL 398 (407)
T ss_pred CCCCCCCceEEEEeCCCCCHHHHH---HHHHHHHHHHHHc
Confidence 4 22 57999999999999999 9999999987654
No 131
>PLN02483 serine palmitoyltransferase
Probab=99.80 E-value=8.8e-18 Score=198.69 Aligned_cols=296 Identities=15% Similarity=0.133 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC
Q 001990 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~ 710 (985)
.+.+.++++.+|+++|.+.+ +.+++|..++.+++.++. .+++.||+++..|.+....++..|++++.++.+
T Consensus 145 ~~~~~ele~~lA~~~g~~~a-i~~~~G~~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~ 215 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAA-IVFGMGYATNSTIIPALI--------GKGGLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC
Confidence 34677899999999997764 555667665533333321 477899999998888777788999999999974
Q ss_pred CCCCCCHHHHHHHHHhc----CCCe-----EEEEEEcC--CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC--
Q 001990 711 AKGNINIEELRKAAEAN----RDNL-----STLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-- 777 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~----~~~t-----~~Vvi~~p--n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-- 777 (985)
|++++++.+++. .+++ +.++++.+ |..|.+. ++++|.++|+++|+++++|++|..+..+..
T Consensus 216 -----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~-~l~~I~~la~~~~~~livDEa~s~g~~G~~G~ 289 (489)
T PLN02483 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC-KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR 289 (489)
T ss_pred -----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc-CHHHHHHHHHHcCCEEEEECcCccCccCCCCC
Confidence 678887777531 1222 55555554 5689998 899999999999999999999964432210
Q ss_pred ------CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 778 ------SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 778 ------~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
.....+.|+++++++|+|+. .+|++++++++++.+.....+. ..++ . . .+.
T Consensus 290 g~~~~~~v~~~~~dI~~~SfSKs~g~-------~GG~i~~~~~li~~l~~~~~~~---------~~~~-~-~-----~p~ 346 (489)
T PLN02483 290 GVCELLGVDPADVDIMMGTFTKSFGS-------CGGYIAGSKELIQYLKRTCPAH---------LYAT-S-M-----SPP 346 (489)
T ss_pred chHHhcCCCcccCcEEEEecchhccc-------CceEEEcCHHHHHHHHHhCccc---------cccC-C-c-----CHH
Confidence 01123579999999999953 2388988887776553211000 0010 0 1 111
Q ss_pred HHHHHHHHHHHh-chh---hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHH
Q 001990 852 ILPISYTYIAMM-GSK---GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (985)
Q Consensus 852 ~~~~A~a~l~~l-g~~---gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~ 926 (985)
.+..+.+.++.+ +.+ -..+..++..++++++++.|++ ++.+.. ..+++... ++-.. ..+..++++.
T Consensus 347 ~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~-~~~sp~~~--l~l~~------~~~~~~~~~~ 417 (489)
T PLN02483 347 AVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLG-DNDSPVMP--IMLYN------PAKIPAFSRE 417 (489)
T ss_pred HHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCCEEE--EEECC------HHHHHHHHHH
Confidence 122223334332 121 1233456778889999999987 554421 11123221 11111 1245678999
Q ss_pred HHHCCCccCCCCCC----CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 927 LMDYGFHGPTMSWP----VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 927 L~e~Gi~~~~~~~p----v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
|.++||.+....+| ..+.+|++++..+|+|||| +++++|+++.+.+.
T Consensus 418 Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId---~~l~~L~~~~~~~~ 468 (489)
T PLN02483 418 CLKQNVAVVVVGFPATPLLLARARICISASHSREDLI---KALEVISEVGDLVG 468 (489)
T ss_pred HHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHH---HHHHHHHHHHHHhC
Confidence 99999987544443 1368999999999999999 99999999877543
No 132
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=2.6e-18 Score=193.69 Aligned_cols=281 Identities=21% Similarity=0.235 Sum_probs=175.2
Q ss_pred HHHHHHHHHhCCC----ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH---HHH-------HhcC
Q 001990 636 NLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP---ATA-------AMCG 701 (985)
Q Consensus 636 el~~~la~l~G~~----~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~---~~~-------~~~G 701 (985)
-+++.++++||++ .+++.+.||+.++.++++++. +++|+|+..+..||-|. ... ....
T Consensus 70 la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl--------~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~ 141 (399)
T PF00464_consen 70 LAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL--------KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLY 141 (399)
T ss_dssp HHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHH
T ss_pred HHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH--------hhcCcEEecChhhcccccccccccccccccccce
Confidence 3567889999999 788999999998877777664 47899998766666542 211 2245
Q ss_pred cEEEEEeCC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccc---cCCC
Q 001990 702 MKIVSVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLT 777 (985)
Q Consensus 702 ~~v~~v~~~-~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~---~g~~ 777 (985)
++++.+++| +++.+|.+++++.+.+++ +++|++...++.-.+ |+++++++|++.|+++++|.+|..|+ +.+.
T Consensus 142 ~~~~~y~~d~~~~~ID~d~l~~~a~~~k--PklIi~G~S~y~~~~--d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~ 217 (399)
T PF00464_consen 142 FESVPYPVDPDTGLIDYDELEKLAKEHK--PKLIICGASSYPRPI--DFKRFREIADEVGAYLMADISHIAGLIAGGLFP 217 (399)
T ss_dssp SEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEEE-SSTSS-----HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-
T ss_pred EEEEeeeeecCCCeECHHHHHHHHhhcC--CCEEEECchhccCcc--CHHHHHHHHHhcCcEEEecccccccceehheec
Confidence 688888988 569999999999998754 445666554443333 79999999999999999999997555 2345
Q ss_pred CCCcCCCcEEEeCCcccccccCCCCCCcceeeeec--------------ccccCcCCCCccccCCCCCCCCCCCCCCCcc
Q 001990 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK--------------KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (985)
Q Consensus 778 ~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~--------------~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~ 843 (985)
+|-.. +|+++++.|||| .||..|+|.++ +++.+.+...+ .+...
T Consensus 218 ~P~~~-ADvvt~sThKtl------~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~av---------------fP~~q 275 (399)
T PF00464_consen 218 NPFPY-ADVVTGSTHKTL------RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAV---------------FPGLQ 275 (399)
T ss_dssp -GCCT-SSEEEEESSGGG-------SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHH---------------TTTT-
T ss_pred Ccccc-ceEEEeeccccc------cccCceEEEEcCCccccCCcccccHHHHHHHhcccc---------------CCCcc
Confidence 66654 999999999999 58999999999 22322221100 01111
Q ss_pred cccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHH
Q 001990 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (985)
Q Consensus 844 s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~ 922 (985)
+++. ...+++.|.+. .......+++.++++.+|++.|.+.|.+ ++.++..+ +..|.+++|++. .++++.+
T Consensus 276 g~~h-~~~iaalAval-~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~gg---Td~H~vlvd~~~----~~~~g~~ 346 (399)
T PF00464_consen 276 GGPH-MHRIAALAVAL-KEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGG---TDNHQVLVDLRS----FGIDGKE 346 (399)
T ss_dssp SS---HHHHHHHHHHH-HHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS----SSSEEEEEGGG----GTS-HHH
T ss_pred cCcc-hhHHHHHHHHH-hcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECC---CCCCeEEEEecc----cccchHH
Confidence 1111 11122333333 3333445688999999999999999987 88886533 456778899863 3678899
Q ss_pred HHHHHHHCCCccCCCCC-----C-CCCEEEEeccCC----CCHHhhc
Q 001990 923 VAKRLMDYGFHGPTMSW-----P-VPGTLMIEPTES----ESKVCHN 959 (985)
Q Consensus 923 l~~~L~e~Gi~~~~~~~-----p-v~~~lris~t~~----~t~eeId 959 (985)
+.+.|.+.||.++.... | .+..||+...+. -.++|+.
T Consensus 347 a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~ 393 (399)
T PF00464_consen 347 AEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMK 393 (399)
T ss_dssp HHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHH
T ss_pred HHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHH
Confidence 99999999998753211 1 346899986553 3445555
No 133
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.80 E-value=6.9e-18 Score=192.30 Aligned_cols=281 Identities=12% Similarity=0.047 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHhhCCCC-cceee-ccchHHHHHHHHHHhhhhcCCCCEEE-EcCCCChhHHHHHHHhhcCCCeEEEEe
Q 001990 210 LESLLNFQTMIADLTGLPM-SNASL-LDEGTAAAEAMAMCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVS 286 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~-~~~sl-~~~~ta~~ea~~~a~~~~~~~g~~Vl-v~~~~h~s~~~~~~~~a~~~gi~v~~~ 286 (985)
.+.+.+.++.+++++|.+. ..+.+ ..+||+++||+++.+- . ++++++ +..+.+.... ...++..|.. ..+
T Consensus 47 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~-~--~g~~~l~i~~G~fg~r~---~~~a~~~g~~-~~~ 119 (360)
T PRK05355 47 EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL-G--GGKKADYVDTGSWSKKA---IKEAKKYGEV-NVA 119 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCCc-eEE
Confidence 3677888899999999743 23444 4788999999987753 2 556655 4445553322 2224455654 222
Q ss_pred --Cc-------hhhhc--cCCCEeEEEEEc-CCCCeeec-cHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001990 287 --DL-------KDIDY--KSGDVCGVLVQY-PGTEGEVL-DYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (985)
Q Consensus 287 --~~-------~~l~~--l~~~t~~V~v~~-pn~~G~i~-dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~ 352 (985)
+. .++++ +++++++|.+++ .|.+|++. ||++| +|++++||+ ..++|..+ +..+| |++
T Consensus 120 ~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDa-vss~g~~~idv~~~--d~~ 190 (360)
T PRK05355 120 ASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADM-SSDILSRPIDVSKF--GLI 190 (360)
T ss_pred ecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc------CCCcEEEEc-CccccCccCCHHHc--cEE
Confidence 21 12322 667889998876 68999998 88877 799999954 34555443 34555 599
Q ss_pred EecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccccccccc-ccCCCccchhHHHHHHH
Q 001990 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD-KATSNICTAQALLANMA 431 (985)
Q Consensus 353 v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre-~atsni~t~~~l~a~~a 431 (985)
++++|++.+| ||+|++++++++++++.+.. + .++++....+ +.+ .+|+|+ ..++++.+
T Consensus 191 ~~ssqK~lgP-----~Glg~l~~s~~~l~~~~~~~-~----------~~~~~~~~~~--~~~~~~Tp~~---~~i~aL~~ 249 (360)
T PRK05355 191 YAGAQKNIGP-----AGLTIVIVREDLLGRALPSI-P----------SMLDYKTHAD--NDSMYNTPPT---FAIYLAGL 249 (360)
T ss_pred EEeccccccC-----CceEEEEECHHHHhhcccCC-C----------hHHHHHHHHh--cCCccCCCcH---HHHHHHHH
Confidence 9999443224 67999999999998876531 2 1111110000 011 367777 78888888
Q ss_pred HHHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCcc-eEEEecCC---HHHHHHHHHHcCceeeee--
Q 001990 432 AMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV-- 502 (985)
Q Consensus 432 a~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~~-~~~i~~~~---~~~l~~~L~~~Gi~~~~~-- 502 (985)
++ .++..+ |++++.+|+.+++++++++|+++|.+..+.+ ...+ .++|..++ ..++.+.+.++||.+...
T Consensus 250 aL--~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~ 327 (360)
T PRK05355 250 VF--KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR 327 (360)
T ss_pred HH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC
Confidence 87 666677 8999999999999999999999972333322 2333 37777766 356767888899987433
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 ~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..+.+|+|+..+||.+|||+|+++|+.
T Consensus 328 ~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 328 SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 247899999999999999999999974
No 134
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.80 E-value=6.1e-18 Score=192.64 Aligned_cols=289 Identities=16% Similarity=0.172 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC
Q 001990 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~ 710 (985)
.+...++++.+++++|.+. .+.+++|++++++++.++. +++++||+++.+|..+...++..|++++.++.
T Consensus 45 ~~~~~~l~~~la~~~~~~~-~iv~~sg~~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~- 114 (349)
T cd06454 45 SDLHEELEEELAEFHGKEA-ALVFSSGYAANDGVLSTLA--------GKGDLIISDSLNHASIIDGIRLSGAKKRIFKH- 114 (349)
T ss_pred chHHHHHHHHHHHHhCCCC-EEEeccHHHHHHHHHHHhc--------CCCCEEEEehhhhHHHHHHHHHcCCceEEecC-
Confidence 3456788999999999875 4667777776654443321 36789999998887766667788999988763
Q ss_pred CCCCCCHHHHHHHHHhcC--CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCC-------CCCC
Q 001990 711 AKGNINIEELRKAAEANR--DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-------TSPG 780 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~~--~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~-------~~~g 780 (985)
+|++++++++++.. +++++|++++| |.+|.+. |+++|+++|+++|+++++|++|..+..+. ....
T Consensus 115 ----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~ 189 (349)
T cd06454 115 ----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGL 189 (349)
T ss_pred ----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccc
Confidence 58899999997532 45778888887 5789998 89999999999999999999986443221 1113
Q ss_pred cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHH
Q 001990 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (985)
Q Consensus 781 ~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l 860 (985)
..+.|++++|+||+|+. +| |+++.++++.+.+....... . .+.... ...++++.+.+
T Consensus 190 ~~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~~~~---------~-~~~~~~------~~~~~a~~~~l 246 (349)
T cd06454 190 TDDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYARGF---------I-FSTSLP------PAVAAAALAAL 246 (349)
T ss_pred cccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhchhh---------h-ccCCCC------HHHHHHHHHHH
Confidence 45789999999999842 33 67777776554332110000 0 000111 11122233444
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCC
Q 001990 861 AMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (985)
Q Consensus 861 ~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~ 939 (985)
..+.. +.+..++..++++++.+.|.+ ++.+. ++.+... +.+.+. .+.+..++.+.|.++||.+....+
T Consensus 247 ~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~~~~--~~~~~~-----~~~~~~~~~~~L~~~gI~~~~~~~ 315 (349)
T cd06454 247 EVLQG--GPERRERLQENVRYLRRGLKELGFPVG--GSPSHII--PPLIGD-----DPAKAVAFSDALLERGIYVQAIRY 315 (349)
T ss_pred HHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCcE--EEEeCC-----ChHHHHHHHHHHHhCCceEEEecC
Confidence 44322 234556777888999998876 44332 2111111 112111 124567899999999998753322
Q ss_pred C----CCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 940 P----VPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 940 p----v~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
+ ..+.+|++++..+|++|++ +++++|+++
T Consensus 316 ~~~~~~~~~iRi~~~~~~~~~~i~---~~~~~l~~~ 348 (349)
T cd06454 316 PTVPRGTARLRISLSAAHTKEDID---RLLEALKEV 348 (349)
T ss_pred CccCCCCCeEEEEEeCCCCHHHHH---HHHHHHHHh
Confidence 1 1368999999999999999 999999764
No 135
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.80 E-value=1e-17 Score=192.50 Aligned_cols=316 Identities=16% Similarity=0.154 Sum_probs=201.5
Q ss_pred CccceecCCCCCCCCCcHHHHHHHHhCCcccc--ccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHH
Q 001990 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE 242 (985)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t--~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~e 242 (985)
...++|||....|...|+++. .+..-..-+. ..+...++...|..+.+.++++.+|+++|.+. +.++++|+.+..
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~ 85 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANL 85 (370)
T ss_pred eECCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHHHH
Confidence 345678888877666666653 4333110001 12445667888999999999999999999976 456667665544
Q ss_pred HHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-cC------CCEeEEEEEcC-CCCeeecc
Q 001990 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KS------GDVCGVLVQYP-GTEGEVLD 314 (985)
Q Consensus 243 a~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l~------~~t~~V~v~~p-n~~G~i~d 314 (985)
++...+ . ++++.|+++..+|+++...++.. ....+.+.+.|++++++ ++ +++.+|++.++ |++|.+.|
T Consensus 86 ~~~~~~--~-~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p 161 (370)
T PRK05937 86 GLCAHL--S-SVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP 161 (370)
T ss_pred HHHHHh--C-CCCCEEEEEhhhhHHHHHHHHHc-CCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC
Confidence 433222 1 26788888899999999998753 23334455567777776 43 34666777877 67999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cccc---eEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCC
Q 001990 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----ELGA---DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (985)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~alg~l~~p~-----~~Ga---Di~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~ 385 (985)
+++|.++||++|++++|| +.++.|.+...+ .||+ |+++.+. |.+| ++|+|+++.++ ..+.+..
T Consensus 162 l~eI~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~-~~~~~~~ 233 (370)
T PRK05937 162 LEQIIALSKKYHAHLIVD-EAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE-VKQDLML 233 (370)
T ss_pred HHHHHHHHHHcCCEEEEE-CCccccccCCCCCchHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH-HHHHHHH
Confidence 999999999999999994 345666554332 3553 3555665 6553 23567776543 2222100
Q ss_pred ceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCC
Q 001990 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (985)
Q Consensus 386 ~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g 465 (985)
+..+.+++.++ ++....++.+++ .++..+| +.+.+++.++.+++++.|...+
T Consensus 234 ---------------------~~~~~~~s~~~----~~~~~~a~~aal--~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~ 285 (370)
T PRK05937 234 ---------------------NSPPLRYSTGL----PPHLLISIQVAY--DFLSQEG-ELARKQLFRLKEYFAQKFSSAA 285 (370)
T ss_pred ---------------------hCCCCeecCCC----CHHHHHHHHHHH--HHHHhCc-HHHHHHHHHHHHHHHHhcCCCC
Confidence 00011122121 123344444554 3443445 4567788889999988886532
Q ss_pred CEEEcCCCCcceEEEecCCHHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 466 TVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 466 ~~~~~~~~~~~~~~i~~~~~~~l~~~L~~~Gi~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. .. ...+.+......++.+.|.++||.++.. ..+.+|+|++.+||++|||+++++|..
T Consensus 286 -~----~~-~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 286 -P----GC-VQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -C----CC-EEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 01 1123332112678999999999988643 146899999999999999999999974
No 136
>PRK15029 arginine decarboxylase; Provisional
Probab=99.79 E-value=1e-17 Score=202.43 Aligned_cols=304 Identities=12% Similarity=0.083 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.+.++++..|++||.+.+.|.+|++|+|+.++++++. +++++||+++++|.+....+.+.|++++++++..+
T Consensus 206 ~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~ 277 (755)
T PRK15029 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRN 277 (755)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 4889999999999999998999999989987776653 47889999999999999999999999999976432
Q ss_pred -----CCCC-----HHHHHHHHHhcCCCeE--------EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEcccccccc
Q 001990 713 -----GNIN-----IEELRKAAEANRDNLS--------TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (985)
Q Consensus 713 -----g~iD-----le~L~~~i~~~~~~t~--------~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~ 774 (985)
+.++ ++.++++|+++ +.++ +|++++|+++|++. |+++|+++||++|++++||+||.. +.
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGa-h~ 354 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWYG-YA 354 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCCcceee-CHHHHHHHHHhcCCeEEEECcccc-cc
Confidence 3455 99999999866 4444 89999999999998 999999999999999999999853 22
Q ss_pred CCCC--CC---------c-CCCc-EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCC
Q 001990 775 GLTS--PG---------Y-IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (985)
Q Consensus 775 g~~~--~g---------~-~g~D-i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~ 841 (985)
.|.. |. . .|+| +++.|.||+++.-. ..+++-++.. .+.+....+... ...-.+||+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT-----QaS~LHv~~~-~~~id~~r~~~~-----l~~~qSTSP 423 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS-----QASYIHVREG-RGAINFSRFNQA-----YMMHATTSP 423 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchh-----hhhhheeCCC-ccccCHHHHHHH-----HHHHcCCCc
Confidence 2211 11 2 6899 99999999996422 3445555432 001110000000 000011211
Q ss_pred cccccchhhhHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhccCC-----------------------------
Q 001990 842 IAAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKHYP----------------------------- 891 (985)
Q Consensus 842 i~s~~~g~~~~~~~A~a~l~~-lg~~gl~~~~~~~~~~a~~l~~~L~~~~~----------------------------- 891 (985)
.|-....+..|..+|+. .|.+ ..++..+.+..+++++.+...
T Consensus 424 ----SY~LmASLD~ar~~m~~~~G~~----l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 495 (755)
T PRK15029 424 ----LYAICASNDVAVSMMDGNSGLS----LTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDF 495 (755)
T ss_pred ----HHHHHHHHHHHHHHHhhhhhHH----HHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccc
Confidence 11111223334444443 3433 334455666677777754110
Q ss_pred -------------eeEcCC--C--------------CceeEEEEEEecCc-----cccCCCCHHHHHHHHHHCCCccCCC
Q 001990 892 -------------ILFRGV--N--------------GTVAHEFIVDLRGL-----KNTAGIEPEDVAKRLMDYGFHGPTM 937 (985)
Q Consensus 892 -------------i~~~g~--~--------------~~~~~~~vv~~~~~-----~~~~g~~~~~l~~~L~e~Gi~~~~~ 937 (985)
+...++ . ++. -+++.++.. ..+.|+++..+.+.|.++||.+.-.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~--Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~ 573 (755)
T PRK15029 496 ADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPI--KVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT 573 (755)
T ss_pred cccchhhhccccceeeecccccccCcccccccccccCCc--eEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEec
Confidence 000000 0 111 123333211 1123455669999998899997543
Q ss_pred CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 938 SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 938 ~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
. ...+.+.++..+|+++++ +++++|.++.+.
T Consensus 574 ~---~~~vL~l~s~g~t~~~~~---~L~~aL~~~~~~ 604 (755)
T PRK15029 574 T---DFQIMFLFSMGVTRGKWG---TLVNTLCSFKRH 604 (755)
T ss_pred C---CCeEEEEeCCCCCHHHHH---HHHHHHHHHHHh
Confidence 3 356778888899999999 999999988553
No 137
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.79 E-value=1.2e-17 Score=184.97 Aligned_cols=321 Identities=17% Similarity=0.180 Sum_probs=200.0
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCcccccc--CCChhhHhhHHH--HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHH
Q 001990 170 FIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQAEIAQGRL--ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~~~~~~t~~--~py~~e~sqg~l--~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~ 245 (985)
|+..+..+ .+|+.|.+++.. |++.| +|-.. +-||- .++.++++.+|+|+|+++.++++++++|.++..++
T Consensus 46 yld~~at~-p~~~~Vldam~~---~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl 119 (428)
T KOG1549|consen 46 YLDNQATG-PMDPRVLDAMLP---YLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVL 119 (428)
T ss_pred EEecCcCC-CCCHHHHHHHHH---HHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHH
Confidence 34444433 256666545443 44443 34322 23333 34888999999999999999999999996655554
Q ss_pred HHhhhhcCCCC----EEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch--------hhhc-cCCCEeEEEEEcC-CCCee
Q 001990 246 MCNNIQKGKKK----TFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYP-GTEGE 311 (985)
Q Consensus 246 ~a~~~~~~~g~----~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~--------~l~~-l~~~t~~V~v~~p-n~~G~ 311 (985)
..+.+. .++ +||+...+||++...|+.+ +..|++++.+|.+ ++++ ++++|++|.+.+. |..|+
T Consensus 120 ~~v~~~--~~~~~~k~iitl~~eH~~v~~s~~~l-~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv 196 (428)
T KOG1549|consen 120 KGVARF--FGDKTKKHIITLQTEHPCVLDSCRAL-QEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGV 196 (428)
T ss_pred HHhhcc--ccccccceEEEecccCcchhHHHHHH-HhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccc
Confidence 443332 333 8999999999999999886 4578999998763 3455 8899999999875 68999
Q ss_pred eccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCceEEEEEchh--hHhcCCCcee
Q 001990 312 VLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE--YKRMMPGRIV 388 (985)
Q Consensus 312 i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~--~~~~lp~~~v 388 (985)
+.|++||+++|++.|+.+++|+ .++.|.++ +..++|+|+++.++++|. |.|+.|+|||+++ .++. .+.+.
T Consensus 197 ~~Pv~EI~~icr~~~v~v~~Da-AQavG~i~vDV~eln~D~~s~s~HK~y-----gp~~iGaLYvr~~~~~~~~-~p~~~ 269 (428)
T KOG1549|consen 197 LQPVKEIVKICREEGVQVHVDA-AQAVGKIPVDVQELNADFLSISAHKIY-----GPPGIGALYVRRKRPRLRV-EPPLS 269 (428)
T ss_pred cccHHHHHHHhCcCCcEEEeeh-hhhcCCccccHHHcCchheeeeccccc-----CCCcceEEEEccCCCcccc-cCccc
Confidence 9999999999999999999953 34677553 568999999999996553 3467999999972 2222 23444
Q ss_pred eeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhc-CCCE
Q 001990 389 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTV 467 (985)
Q Consensus 389 G~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~ 467 (985)
| |.+ -| ..+.||-++..+.+ +-+++-.......+.+.+.++ +...+..++.. ..++
T Consensus 270 G------Ggq-------~r----~~rsGT~~~~~~~~---~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~ 326 (428)
T KOG1549|consen 270 G------GGQ-------ER----GLRSGTVATPLAVG---LGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEV 326 (428)
T ss_pred C------Ccc-------cc----ccccCCcCchhhhh---hHHHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCchh
Confidence 4 111 11 12357766643333 334441122222233444433 55555555533 2113
Q ss_pred EEcCC-C--CcceEEEecC--CHHHHHHHHHH----cCce-----eee------------ecCCeEEEEeccCCCHHHHH
Q 001990 468 EVQGL-P--FFDTVKVKCA--DAHAIASAAYK----IEMN-----LRV------------VDSNTVTASFDETTTLEDVD 521 (985)
Q Consensus 468 ~~~~~-~--~~~~~~i~~~--~~~~l~~~L~~----~Gi~-----~~~------------~~~~~lris~~~~~t~edid 521 (985)
.+.+. + .-..+.|.++ ....+...+.+ -|.. +++ .....+|+|+.-|+|++|++
T Consensus 327 ~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~ 406 (428)
T KOG1549|consen 327 TLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDID 406 (428)
T ss_pred hccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHH
Confidence 33322 1 1123444443 11111111111 1211 000 01367999999999999999
Q ss_pred HHHHHHhC
Q 001990 522 KLFIVFAG 529 (985)
Q Consensus 522 ~ll~~l~~ 529 (985)
++++.+..
T Consensus 407 ~~~~~i~~ 414 (428)
T KOG1549|consen 407 YLVDAIKK 414 (428)
T ss_pred HHHHHHHH
Confidence 99999974
No 138
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.79 E-value=1.5e-17 Score=188.72 Aligned_cols=282 Identities=12% Similarity=0.056 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHhhCCCC-cceeeccc-hHHHHHHHHHHhhhhcCCCCEEEE-cCCCChhHHHHHHHhhcCCCeEEEEe
Q 001990 210 LESLLNFQTMIADLTGLPM-SNASLLDE-GTAAAEAMAMCNNIQKGKKKTFII-ASNCHPQTIDICITRADGFDIKVVVS 286 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~-~~~sl~~~-~ta~~ea~~~a~~~~~~~g~~Vlv-~~~~h~s~~~~~~~~a~~~gi~v~~~ 286 (985)
.+.+.+.++.+..++|.+. ..+.++.| ||.++|+++.++. . +++++++ ..+.+..-. ...++..|+ +..+
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~-~--~~~~~l~i~~G~fg~r~---~~~a~~~g~-~~~~ 108 (349)
T TIGR01364 36 EAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL-A--EGKVADYIVTGAWSKKA---AKEAKKYGV-VNVV 108 (349)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCC-cEEE
Confidence 3778888999999999743 34666655 9999999988753 2 5677664 344553322 333556676 4443
Q ss_pred C---------chhhhc--cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEE
Q 001990 287 D---------LKDIDY--KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (985)
Q Consensus 287 ~---------~~~l~~--l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v 353 (985)
. ..+++. ++++++.|.+++ .|++|+..+ ++++.+|++++||+ ..++|..+ +..+| |+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDa-vss~g~~~id~~~~--d~~~ 180 (349)
T TIGR01364 109 ASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADM-SSNILSRPIDVSKF--GLIY 180 (349)
T ss_pred eccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEc-cccccCccCCHHHc--cEEE
Confidence 2 123332 456889998876 589999876 66777899999954 33555443 33445 5999
Q ss_pred ecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001990 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 354 ~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
+++ |.|| | ||+|++++++++++++++... ..+.+....+. ..-.+|+|+ ..++++.++
T Consensus 181 ~ssqK~lg-P-----~Glg~l~~s~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~Tp~~---~~i~al~~a 239 (349)
T TIGR01364 181 AGAQKNIG-P-----AGLTVVIVRKDLLGRASRITP-----------SMLNYKIHAEN-DSMYNTPPT---FAIYVSGLV 239 (349)
T ss_pred EecccccC-C-----CceEEEEECHHHHhhcccCCC-----------CcchHHHHHhc-CCCCCCCcH---HHHHHHHHH
Confidence 999 5443 4 679999999999988755211 11111100000 011267776 788888888
Q ss_pred HHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-C--CCcc-eEEEecCC---HHHHHHHHHHcCceeeeec-
Q 001990 433 MYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVVD- 503 (985)
Q Consensus 433 ~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~--~~~~-~~~i~~~~---~~~l~~~L~~~Gi~~~~~~- 503 (985)
+ .++..+ |++++.+|+.+++++++++|++++|+.... + .... .++|..++ ..++.+.+.++||.+....
T Consensus 240 l--~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~ 317 (349)
T TIGR01364 240 F--KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR 317 (349)
T ss_pred H--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc
Confidence 7 677778 799999999999999999999995475542 2 1232 36677664 3667677888999654432
Q ss_pred -CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 504 -SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 504 -~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+.+|+|+..+||++|||+|+++|+.
T Consensus 318 ~~g~vRvS~~~~nt~edid~l~~al~~ 344 (349)
T TIGR01364 318 SVGGMRASIYNAMPLEGVQALVDFMKE 344 (349)
T ss_pred ccCeeEEECcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999974
No 139
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.79 E-value=4.6e-17 Score=184.94 Aligned_cols=348 Identities=17% Similarity=0.210 Sum_probs=224.8
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccc-cCCCCcchhhhcHHHHHHHHHHHHHHHhC
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~~G~~~~~~el~~~la~l~G 646 (985)
+.+.+..+||+-++.-+ +..+|++++.+..+.+.|........+ +.+|. ..-++.+.|.+++.
T Consensus 50 l~DvdG~~ylDf~sgi~------v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e----------~~v~~ae~L~~~~p 113 (447)
T COG0160 50 LYDVDGNEYLDFLSGIA------VLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYE----------PYVELAEKLTALAP 113 (447)
T ss_pred EEeCCCCEEEEcccCcc------hhccCCCCHHHHHHHHHHHHHhhcccCCcccch----------hHHHHHHHHHHhCC
Confidence 45566666666655443 456899888777766665433221111 22222 34467788888776
Q ss_pred CC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhc--------C-----cEEEEEeCC
Q 001990 647 FD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC--------G-----MKIVSVGTD 710 (985)
Q Consensus 647 ~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~--------G-----~~v~~v~~~ 710 (985)
.+ ...++.+||++++++++..+|.| +++..|| ....+||....++.+. | -.|..+|..
T Consensus 114 ~~~~~~~~f~~sGaeA~E~AiKiAr~~------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp 187 (447)
T COG0160 114 GSGLKKVFFGNSGAEAVEAAIKIARAY------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYP 187 (447)
T ss_pred cccCCeEEecCCcHHHHHHHHHHHHHH------hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCC
Confidence 53 33588899999999999999987 3445566 5778999876664321 1 136677764
Q ss_pred CCC------------CCCHHHHHHHHHhc---CCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccc
Q 001990 711 AKG------------NINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMN 771 (985)
Q Consensus 711 ~~g------------~iDle~L~~~i~~~---~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~ 771 (985)
... .-..+.++..+... ..++++++++.. +..|++.+| ++++.++|++||++||+|++|
T Consensus 188 ~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ-- 265 (447)
T COG0160 188 NPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ-- 265 (447)
T ss_pred ccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc--
Confidence 221 11244455545422 246788888754 567888743 899999999999999999887
Q ss_pred cccCCCCCCcCC--------CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcc
Q 001990 772 AQVGLTSPGYIG--------ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (985)
Q Consensus 772 ~~~g~~~~g~~g--------~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~ 843 (985)
.|+.+.|+|. +|+++++ |.+ |. |-.+|.+..++++....|+...
T Consensus 266 --tG~GRTG~~fa~E~~gv~PDivt~a--K~i----g~-G~Pl~avv~r~ei~~~~~g~~~------------------- 317 (447)
T COG0160 266 --TGFGRTGKMFAFEHFGVEPDIVTLA--KSL----GG-GLPLSAVVGRAEIMDWPPGGHG------------------- 317 (447)
T ss_pred --cCCCccccchhhhhcCCCCCEEEec--ccc----cC-CCceeEEeccHHhcccCCcccC-------------------
Confidence 4666766542 7998763 766 33 4457778888888774444221
Q ss_pred cccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCeeE--cCCCCceeEEEEEEecCccccCCC
Q 001990 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPILF--RGVNGTVAHEFIVDLRGLKNTAGI 918 (985)
Q Consensus 844 s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~~--~g~~~~~~~~~vv~~~~~~~~~g~ 918 (985)
.++.|++..++++.+.|+.+.++++. ++..+..+||+++|.+ -++.+- .|.+-....+++-+ +..++....
T Consensus 318 ~Tf~GNpva~Aaa~AvL~vie~e~L~---~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d-~~t~~p~~~ 393 (447)
T COG0160 318 GTFGGNPVACAAALAVLDVIEEENLL---ERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKD-RDTKEPDAE 393 (447)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHccHH---HHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecC-CCCCCCCHH
Confidence 12446778888888999988777655 4666778899998875 233221 12111111222211 100111112
Q ss_pred CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 919 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 919 ~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
....+++++.++|+.+.++. +..+.|||.|....|+|++| +++++|.+++++.
T Consensus 394 ~~~~i~~~~~~~Glil~~~G-~~~nviRi~PPL~is~e~~d---~~l~il~~al~~~ 446 (447)
T COG0160 394 LAAKIVARAFERGLLLLTCG-PHGNVLRILPPLTISDEELD---EGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHcCCEEeccC-CCCcEEEEeCCcccCHHHHH---HHHHHHHHHHHhh
Confidence 24678889999999876553 23589999999999999999 9999999988753
No 140
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.79 E-value=3.8e-17 Score=189.36 Aligned_cols=290 Identities=14% Similarity=0.123 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
...++++.|+++++.+. .++++||++++++++.++|.|...++..++++||. ...+||.+.......|.
T Consensus 78 ~~~~la~~L~~~~~~~~-~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 156 (397)
T TIGR03246 78 PVLRLAKKLVDATFADK-VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAP 156 (397)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 35688999999987654 47789999999999999998754432224556665 66789987665544332
Q ss_pred ---EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEEccccccccC
Q 001990 703 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVG 775 (985)
Q Consensus 703 ---~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~---~di~eI~~la~~~g~lliVD~a~~~~~~g 775 (985)
.+..+|. .|+++++++++ +++++|+++.++ +.|++. .++++|+++|++||+++|+|++| .+++
T Consensus 157 ~~~~~~~~~~-----~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~G- 226 (397)
T TIGR03246 157 LPGGIKHAPY-----NDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVG- 226 (397)
T ss_pred CCCceEEeCC-----CCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCC-
Confidence 2334444 38999999997 789999988554 567553 25999999999999999999998 2332
Q ss_pred CCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccc
Q 001990 776 LTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (985)
Q Consensus 776 ~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~ 847 (985)
+.|. ..+|++++ .|.+ + ||..+|.+++++++.+.+.... + .. ++.
T Consensus 227 --r~G~~~a~~~~gv~pDi~t~--~K~l----g-gG~pigav~~~~~i~~~~~~~~---------~---~~------t~~ 279 (397)
T TIGR03246 227 --RTGELYAYMHYGVTPDILTS--AKAL----G-GGFPIGAMLTTTEIAAHLKVGT---------H---GT------TYG 279 (397)
T ss_pred --ccccchhhhhcCCCCCEEEe--ehhh----h-CCcceeEEEEcHHHHHhccCCC---------c---CC------CCC
Confidence 2221 13687754 4666 3 4566888888888776553210 0 01 111
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-c--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHH
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-H--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~ 924 (985)
|++..++++.+.|..+..+. ..++..++.++|+++|++ . +.+....+....+ +.+.+.. ........++
T Consensus 280 ~~p~~~aaa~a~l~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~--~~i~~~~---~~~~~~~~~~ 351 (397)
T TIGR03246 280 GNPLACAVAGKVLDLVNTPE---LLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLL--IGAVLTE---AYQGKAKQFV 351 (397)
T ss_pred CCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceE--EEEEEcC---chhhHHHHHH
Confidence 24445556667777664443 445667788899998876 2 2222111100111 2222210 0012356889
Q ss_pred HHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 925 ~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+.|.++|+.+.... ++.+|++|+..+|++||| ++++.|.+++.+
T Consensus 352 ~~l~~~Gv~~~~~g---~~~lR~~p~~~~t~~~i~---~~~~~l~~~l~~ 395 (397)
T TIGR03246 352 NAAAEEGVIALIAG---PNVVRFAPSLVISDDDID---EGLARFERAIEQ 395 (397)
T ss_pred HHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHH---HHHHHHHHHHHH
Confidence 99999999975332 378999999999999999 999999888764
No 141
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.79 E-value=1.8e-17 Score=191.31 Aligned_cols=310 Identities=14% Similarity=0.148 Sum_probs=202.8
Q ss_pred CCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH
Q 001990 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (985)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea 243 (985)
|...++|||....|+...+++. ++.. |.+.+ ..++..-|+...+.++|+.+|+++|.+. +.++.+|+++..+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~-a~~~---~g~~~--~~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALE-SLSH---YGCGS--CGPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDGASTTSS 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHH-HHHH---hCCCC--cccccccCChHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHH
Confidence 4556789999987766666653 4332 33332 2444446677788899999999999885 6678888777777
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe---Cchhhhc----cC-----------CCEeEEEEEc
Q 001990 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY----KS-----------GDVCGVLVQY 305 (985)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~---~~~~l~~----l~-----------~~t~~V~v~~ 305 (985)
+++++ .. +||+||+++..|+++...++. . +.+++++ |.+++++ +. ++++.|++..
T Consensus 74 ~i~~l-~~--~GD~Vl~~~~~h~s~~~~~~l-~---~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 74 TVAAF-AK--RGDLLVVDRGVNEALLVGVSL-S---RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred HHHHh-CC--CCCEEEEeccccHHHHHHHHH-c---CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 66664 23 899999999999999888732 2 3455544 3343332 21 3578888877
Q ss_pred C-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC-----------CcccceEEEecC-ccccccCCCCCCceEE
Q 001990 306 P-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----------GELGADIVVGSA-QRFGVPMGYGGPHAAF 372 (985)
Q Consensus 306 p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p-----------~~~GaDi~v~s~-k~lg~P~~~GGP~~G~ 372 (985)
+ |+.|.+.|+++|.++||++|+++++| +.+++|.+... ...|+||++++. |.++ |-.|+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~livD-e~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-------~~gg~ 218 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLILD-ESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-------SVGGM 218 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEEE-CcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-------ccCcE
Confidence 6 78999999999999999999999994 55565544321 134789999996 6553 34467
Q ss_pred EEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCc-cch-hHH--HHHHHHHHHHHcCcchHHHHHH
Q 001990 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI-CTA-QAL--LANMAAMYAVYHGPEGLKTIAQ 448 (985)
Q Consensus 373 l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni-~t~-~~l--~a~~aa~y~~~~g~~Gl~~i~~ 448 (985)
+.+++++++.+.. .+ ..++ .++ ++. ++..+++ ..+. + .+++.+
T Consensus 219 v~~~~~~~~~~~~--~~---------------------------~~~~~~~~~~p~~~~aa~~al--~~~~-~-~~~~~~ 265 (392)
T PLN03227 219 TVGSEEVVDHQRL--SG---------------------------SGYCFSASAPPFLAKADATAT--AGEL-A-GPQLLN 265 (392)
T ss_pred EecCHHHHHHHHH--hC---------------------------cCccccCCCCHHHHHHHHHHH--HHHh-c-CHHHHH
Confidence 7778776654310 00 0001 111 121 1222222 1211 1 246777
Q ss_pred HHHHHHHHHHHHHhcCCCEEEc----------CCCCcceEEEecCC------------HHHHHHHHHHcCceeee-----
Q 001990 449 RVHGLAGTFALGLKKLGTVEVQ----------GLPFFDTVKVKCAD------------AHAIASAAYKIEMNLRV----- 501 (985)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~~~~----------~~~~~~~~~i~~~~------------~~~l~~~L~~~Gi~~~~----- 501 (985)
+..++++++++.|++.+ +..+ .......+.|.+.+ ..++.++|.++|+.+..
T Consensus 266 ~l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 344 (392)
T PLN03227 266 RLHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHV 344 (392)
T ss_pred HHHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEeccccc
Confidence 88999999999998643 3211 11112223344322 24888999999997642
Q ss_pred ------ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 502 ------VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 502 ------~~~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
.++..+|++++..+|++|||+++++|...
T Consensus 345 ~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~ 379 (392)
T PLN03227 345 KKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEA 379 (392)
T ss_pred CCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 23578999999999999999999999753
No 142
>PLN02721 threonine aldolase
Probab=99.79 E-value=1.4e-17 Score=190.02 Aligned_cols=292 Identities=15% Similarity=0.141 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH---HHHhcCcEEEEEeCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~---~~~~~G~~v~~v~~~ 710 (985)
..++++.+++++|.+.. +++++|++++..++.++. ..++++|++++++|..... .+...|++++.+|.+
T Consensus 42 ~~~l~~~la~~~~~~~~-~~~~~Gs~a~~~~l~~~~-------~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKEAA-LFVPSGTMGNLISVLVHC-------DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN 113 (353)
T ss_pred HHHHHHHHHHHhCCcee-EEecCccHHHHHHHHHHc-------cCCCCeEEEcCccceehhcccchhhhcCceeEecCCC
Confidence 56889999999998764 555667766544433321 1267899999988754433 456789999999988
Q ss_pred CCCCCCHHHHHHHHHhcC----CCeEEEEEEcC-C-Cccccc--cCHHHHHHHHHHcCCEEEEEccccccc---cCCCCC
Q 001990 711 AKGNINIEELRKAAEANR----DNLSTLMVTYP-S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSP 779 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~~----~~t~~Vvi~~p-n-~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~---~g~~~~ 779 (985)
+++.+|+++++++++++. +++++|+++++ | ++|.+. .++++|.++|+++|+++++|+++..+. .+. .+
T Consensus 114 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CH
Confidence 889999999999997321 47889999774 3 578764 138899999999999999999874321 111 12
Q ss_pred C--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHH
Q 001990 780 G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 780 g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
. ..++|.+++++||+|+ +|.+++++.+++++..+.... .. .+ .... ..+. .+.+++
T Consensus 193 ~~~~~~~d~~~~s~sK~l~------~~~G~~~~~~~~~~~~~~~~~--~~---------~~-~~~~--~~~~--~~~~~~ 250 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLG------APVGSVIVGSKSFIRKAKRLR--KT---------LG-GGMR--QVGV--LAAAAL 250 (353)
T ss_pred HHHhhhCCEEEEecccccC------CceeeEEecCHHHHHhHHHHH--Hh---------cC-CCee--hhHH--HHHHHH
Confidence 1 2378999999999984 443345666666654422100 00 00 0000 0111 111122
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC
Q 001990 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (985)
Q Consensus 858 a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~ 935 (985)
..+.. ..+..++..++++++.+.|++. +.+....+ ..+.+.++++. ..+.+...++++|.++||.+.
T Consensus 251 ~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~L~~~gi~v~ 319 (353)
T PLN02721 251 VALQE-----NVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAV---ETNIVYFDITD---GSRITAEKLCKSLEEHGVLLM 319 (353)
T ss_pred HHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEecCCc---cceEEEEEccC---CccccHHHHHHHHHhCCcEEe
Confidence 22221 1122334456678899999763 32212221 12234445431 012467889999999999985
Q ss_pred CCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 936 TMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 936 ~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
... .+.+|++++..++++|++ +++++|++++.
T Consensus 320 ~~~---~~~lR~~~~~~~~~~~i~---~~~~~l~~~~~ 351 (353)
T PLN02721 320 PGN---SSRIRVVTHHQISDSDVQ---YTLSCFQQAAL 351 (353)
T ss_pred cCC---CceEEEEecCcCCHHHHH---HHHHHHHHHhh
Confidence 432 478999999899999999 99999988754
No 143
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.78 E-value=5.1e-18 Score=192.44 Aligned_cols=288 Identities=15% Similarity=0.125 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH---HHHhcCcEEEEEeC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGT 709 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~---~~~~~G~~v~~v~~ 709 (985)
...++++.+++++| +...+++++|++++..+ ++.+. .++++|+++++.|..+.. .+...|++++.++.
T Consensus 33 ~~~~l~~~~a~~~g-~~~~~~~~~gt~a~~~~---~~~l~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 103 (338)
T cd06502 33 TTAKLEARAAELFG-KEAALFVPSGTAANQLA---LAAHT-----QPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPG 103 (338)
T ss_pred HHHHHHHHHHHHhC-CCeEEEecCchHHHHHH---HHHhc-----CCCCeEEEecCcceeeecCCcHHHHcCceEEeecC
Confidence 36678899999999 54456666777665433 33321 367889999988875432 34568999999998
Q ss_pred CCCCCCCHHHHHHHHHhcC----CCeEEEEEEcCCCcccc-c-cCHHHHHHHHHHcCCEEEEEccccccc---cCCC-CC
Q 001990 710 DAKGNINIEELRKAAEANR----DNLSTLMVTYPSTHGVY-E-EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLT-SP 779 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~----~~t~~Vvi~~pn~~G~i-~-~di~eI~~la~~~g~lliVD~a~~~~~---~g~~-~~ 779 (985)
+. +.+|+++|+++++++. +++++|++++||..|.+ . .++++|+++|+++|+++++|++|.... .+.. ..
T Consensus 104 ~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~ 182 (338)
T cd06502 104 EN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKT 182 (338)
T ss_pred CC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHH
Confidence 54 7899999999997321 37889999999654543 2 268999999999999999999873221 1110 01
Q ss_pred CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHH
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
...++|+++.++||+|+. |++++++.++++.+.+...... .+ .+... +...+ ++.
T Consensus 183 ~~~~~d~~~~s~sK~~~~------~~g~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~----~~~~~---~a~ 237 (338)
T cd06502 183 YKSGVDSVSFCLSKGGGA------PVGAVVVGNRDFIARARRRRKQ-----------AG-GGMRQ----SGFLA---AAG 237 (338)
T ss_pred HHhcCCEEEEeccccCCC------ccceEEECCHHHHHHHHHHHHH-----------hC-CChhh----HHHHH---HHH
Confidence 124789999999999954 4445666677665544211000 00 00000 11111 222
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH---HCCCccC
Q 001990 860 IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM---DYGFHGP 935 (985)
Q Consensus 860 l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~---e~Gi~~~ 935 (985)
+..+...++.+..++..++++++.+.|++ ++.+ .+ +..+.+.+..+. ......++.+.|. ++|+.+.
T Consensus 238 ~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~----~~~~~~~v~~~~----~~~~~~~l~~~l~~~~~~gi~~~ 308 (338)
T cd06502 238 LAALENDLWLRRLRHDHEMARRLAEALEELGGLE-SE----VQTNIVLLDPVE----ANAVFVELSKEAIERRGEGVLFY 308 (338)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCc-cc----ccCCeEEEecCC----ccHHHHHHHHHHHHhhhCCEEEE
Confidence 33344445556667788888999999987 4422 21 122334444321 0111234444443 6788874
Q ss_pred CCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 936 TMSWPVPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 936 ~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
... .+.||++++..+|++|++ ++++++++
T Consensus 309 ~~~---~~~lRi~~~~~~~~~~i~---~~~~~l~~ 337 (338)
T cd06502 309 AWG---EGGVRFVTHWDTTEEDVD---ELLSALKA 337 (338)
T ss_pred ecC---CCeEEEEeecCCCHHHHH---HHHHHHhc
Confidence 332 278999999999999999 99998864
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.78 E-value=1.1e-17 Score=194.44 Aligned_cols=313 Identities=13% Similarity=0.142 Sum_probs=200.0
Q ss_pred CccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHH
Q 001990 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (985)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~ 244 (985)
...++|+|.+.+|..+.+... ++ .+.+ + ++..+....|..+...++++.+|+++|.+. +.++.+|+.+.+++
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~-~~-~~~~--~--~~~~s~~~~g~~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~a 121 (402)
T TIGR01821 50 WCSNDYLGMGQHPEVLQAMHE-TL-DKYG--A--GAGGTRNISGTNIPHVELEAELADLHGKES--ALVFTSGYVANDAT 121 (402)
T ss_pred eEccCcCCCCCCHHHHHHHHH-HH-HHcC--C--CCcchhhhhCCcHHHHHHHHHHHHHhCCCe--EEEECchHHHHHHH
Confidence 345678888865544444432 32 2221 1 111234445666677889999999999754 66788888887776
Q ss_pred HHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe---Cchhhhc-c---C-CCEeEEEEEcC-CCCeeeccH
Q 001990 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-K---S-GDVCGVLVQYP-GTEGEVLDY 315 (985)
Q Consensus 245 ~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~---~~~~l~~-l---~-~~t~~V~v~~p-n~~G~i~dl 315 (985)
+.++... .+++.|+.+...|+++...++. .|+++..+ |.+++++ + + +++++|++.+| |++|.+.|+
T Consensus 122 i~~l~~~-~~~~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l 196 (402)
T TIGR01821 122 LATLAKI-IPGCVIFSDELNHASMIEGIRH----SGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPI 196 (402)
T ss_pred HHHhhCC-CCCCEEEEcchHhHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCH
Confidence 6543211 1567777777899999988753 35565444 3455655 3 2 36888888887 689999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCC
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l~~p~---------~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~ 385 (985)
++|.++|+++|++++|| +.+++|++.+.+ ....|+++++. |.|+.+ | |++..++++++.+..
T Consensus 197 ~~i~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~i~~~~~~~~~l~~ 268 (402)
T TIGR01821 197 EEICDLADKYGALTYLD-EVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV---G----GYIAASRKLIDAIRS 268 (402)
T ss_pred HHHHHHHHHcCCEEEEe-CcccccccCCCCCccchhccCCCCCeEEEEechhhhccC---C----ceeecCHHHHHHHHH
Confidence 99999999999999994 344545432211 12468988887 988642 2 678888777665410
Q ss_pred ceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCC
Q 001990 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (985)
Q Consensus 386 ~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g 465 (985)
. .+.|.++ ++. .+....+..+++ ..+..+ +++.++..++.+++++.|+++|
T Consensus 269 ~----------~~~~~~t------------~~~---~~~~~aaa~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g 319 (402)
T TIGR01821 269 Y----------APGFIFT------------TSL---PPAIAAGATASI--RHLKES--QDLRRAHQENVKRLKNLLEALG 319 (402)
T ss_pred h----------CcCceec------------CcC---CHHHHHHHHHHH--HHhhcC--HHHHHHHHHHHHHHHHHHHHcC
Confidence 0 0001110 000 011222333333 333222 5566677789999999999987
Q ss_pred CEEEcCCCCcceEEEecCC---HHHHHHHHHH-cCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 466 TVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 466 ~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~-~Gi~~~~~-------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
++++.. ..+.+.+.++. +.++.++|.+ +||.++.. ..+.+|++++.++|++|+++++++|..
T Consensus 320 -~~~~~~-~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 320 -IPVIPN-PSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred -CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 776532 12223343332 6788899875 59988653 126899999999999999999999974
No 145
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.78 E-value=3.4e-17 Score=189.92 Aligned_cols=287 Identities=15% Similarity=0.176 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHh-cCC-CCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~-~g~-~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
..++++.++++.+.+. .++++||++++++++.++|.|... +|. .++++||. ...+||.....+...+-
T Consensus 84 ~~~l~~~l~~~~~~~~-~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 162 (396)
T PRK04073 84 LGPWYEKVAKLTGKDM-VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFG 162 (396)
T ss_pred HHHHHHHHHhcCCCCe-EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCC
Confidence 4578889999887654 477899999999999988876422 121 23456665 56789987655443321
Q ss_pred ----EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEcccccccc
Q 001990 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV 774 (985)
Q Consensus 703 ----~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~ 774 (985)
.+..++.+ |+++++++++ +++++|+++.+ |.+|.+.++ +++|.++|+++|+++++|++|. +++
T Consensus 163 ~~~~~~~~~~~~-----d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g 233 (396)
T PRK04073 163 PMLPGIKKIPYG-----DLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLG 233 (396)
T ss_pred CCCCCceEeCCC-----CHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCC
Confidence 12334432 8999999987 78988888877 578988632 8999999999999999999985 222
Q ss_pred CCC-----CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 775 GLT-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 775 g~~-----~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
... ......+|++++ .|.+ ++||..+|++++++++.+.+..... ..| .+ ++
T Consensus 234 ~~g~~~~~~~~~~~pdi~~~--sK~l----g~gg~~ig~~~~~~~i~~~~~~~~~------------~~t--~~----~~ 289 (396)
T PRK04073 234 RTGKLFACDWDNVTPDMYIL--GKAL----GGGVFPISCVAANRDILGVFTPGSH------------GST--FG----GN 289 (396)
T ss_pred cCcHHHHhhhcCCCCCEEEe--cccc----cCCCCcceEEEEcHHHHhhhcCCCC------------CCC--CC----CC
Confidence 100 011224688765 3766 4566678999999887765532100 011 11 23
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
+..++++.+.|..+.++++. ++..++.++|.+.|++ ....+...+ .....+.+++. .+..++.++|.
T Consensus 290 ~~~~aaa~aaL~~~~~~~l~---~~~~~~~~~l~~~L~~l~~~~i~~~~--~~g~~~~~~~~-------~~~~~~~~~l~ 357 (396)
T PRK04073 290 PLACAVSIAALEVLEEEKLP---ERSLELGEYFKEQLKEIDNPMIKEVR--GRGLFIGVELN-------EPARPYCEALK 357 (396)
T ss_pred HHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhhcCCccccee--cceEEEEEEec-------chHHHHHHHHH
Confidence 34445556667665444443 4555678888888876 222111100 01112334432 24678999999
Q ss_pred HCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 929 DYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 929 e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
++|+.+.... ++.|||+|+..+|+|||| +++++|++++
T Consensus 358 ~~Gv~~~~~~---~~~iRi~p~l~~t~e~i~---~~~~~l~~~l 395 (396)
T PRK04073 358 EEGLLCKETH---ETVIRFAPPLVITKEELD---WAFEKIKAVL 395 (396)
T ss_pred HCCeEEecCC---CCEEEEECCcccCHHHHH---HHHHHHHHHh
Confidence 9999975321 378999999999999999 9999998764
No 146
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.78 E-value=5.8e-17 Score=192.59 Aligned_cols=303 Identities=16% Similarity=0.176 Sum_probs=196.5
Q ss_pred CHHHHHHHHHHHhcCc-cCcCccc-ccccc--eecccCccc-cccccccccccccCCCCcchhhhcHHHHHHHHHHHHHH
Q 001990 569 TEHELLRYIHLLQSKE-LSLCHSM-IPLGS--CTMKLNATT-EMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCT 643 (985)
Q Consensus 569 se~e~~~~l~~l~~~~-~~~~~~~-~~lGs--~~~~~~~~~-~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~ 643 (985)
.-.++++.+.+.-..+ ..+ +.. .++|+ |.+-+++.. ++.. ...|-+-.. .|.++++.++..++-+|+|+
T Consensus 61 ~~~~~l~~l~~~l~~~sv~~-~~P~ry~ghm~~~~~~paila~~~a----~~~N~n~~~-~e~SP~~t~lE~~vi~~la~ 134 (608)
T TIGR03811 61 NMKDVLDELSSRLRTESVPW-HSAGRYWGHMNSETLMPAILAYNYA----MLWNGNNVA-YESSPATSQMEEEVGKEFAT 134 (608)
T ss_pred CHHHHHHHHHHHHhcCCCCC-CCccceEEECcCCCCHHHHHHHHHH----HHhCCCCCc-cccCchHHHHHHHHHHHHHH
Confidence 5677777777654444 433 334 56775 211111111 1111 111211122 26788999999999999999
Q ss_pred HhCCCcc-ceecChHHHHHHHHHHHHHHHHH-----hcCC----------------------------------------
Q 001990 644 ITGFDSF-SLQPNAGAAGEYAGLMVIRAYHK-----ARGD---------------------------------------- 677 (985)
Q Consensus 644 l~G~~~~-~~~~~sGa~g~~a~l~air~~~~-----~~g~---------------------------------------- 677 (985)
++|.+.. ..++++|+.+++.++.++|.... ....
T Consensus 135 l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~ 214 (608)
T TIGR03811 135 LMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSAR 214 (608)
T ss_pred HhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccc
Confidence 9999864 36677888888888888876320 0000
Q ss_pred ----CCC-CEEEEcCCCCCCcHHHHHhcCc---EEEEEeCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-Ccccc
Q 001990 678 ----HHR-NVCIIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVY 745 (985)
Q Consensus 678 ----~~~-~~Vlv~~~~Hg~~~~~~~~~G~---~v~~v~~~~~g~iDle~L~~~i~~~---~~~t~~Vvi~~pn-~~G~i 745 (985)
..+ .++++|..+|-+..+++...|+ .++.||+|+++++|+++|+++|++. +..+.+|+.+.++ .+|.+
T Consensus 215 ~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai 294 (608)
T TIGR03811 215 SGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV 294 (608)
T ss_pred cccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc
Confidence 001 1588899999999999999998 6999999999999999999999742 2245567777775 49999
Q ss_pred ccCHHHHHHHH---HHcCC--EEEEEccccccc-cCCCC-----------------------------C-------CcCC
Q 001990 746 EEGIDEICKII---HDNGG--QVYMDGANMNAQ-VGLTS-----------------------------P-------GYIG 783 (985)
Q Consensus 746 ~~di~eI~~la---~~~g~--lliVD~a~~~~~-~g~~~-----------------------------~-------g~~g 783 (985)
+ ||++|+++| +++|+ |+|||+|+.-.. ..+.+ + +-..
T Consensus 295 D-pl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ 373 (608)
T TIGR03811 295 D-GIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISE 373 (608)
T ss_pred C-CHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcC
Confidence 9 899999999 67888 699999874211 00111 0 1246
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeeccc-ccCcC---CCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFL---PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~-l~~~l---pg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
+|.++.++||++..|+++ |.+++|+. +.+.+ ...+.....+ .. ...+...+.++..| ..+++.|+.
T Consensus 374 ADSItvDpHK~g~~Py~~-----G~ll~Rd~~~~~~~~~~a~Yl~~~~~~--~p-~~~g~~~legSR~g--a~AlklW~~ 443 (608)
T TIGR03811 374 AESVTIDPHKMGYIPYSA-----GGIVIQDIRMRDVISYFATYVFEKGAD--IP-ALLGAYILEGSKAG--ATAASVWAA 443 (608)
T ss_pred ceEEEeCcccccccCCCe-----EEEEEeCHHHHHHHhcCcchhcccccc--Cc-ccccccceecCCcc--HHHHHHHHH
Confidence 999999999999988765 45777753 22221 1111000000 00 00011112222222 335678999
Q ss_pred HHHh--chhhHHHHHHHHHHHHHHHHHHHhc
Q 001990 860 IAMM--GSKGLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 860 l~~l--g~~gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
++.+ |.+|+.++..+.+++++++.+.|++
T Consensus 444 lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 444 HKVLPLNVTGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998 9999999999999999999999976
No 147
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.78 E-value=3.2e-17 Score=186.10 Aligned_cols=294 Identities=16% Similarity=0.149 Sum_probs=190.4
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--c-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~--~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++...+++++...+|.. . ..++.++|++++.+++.++. .++++|++++..|..+...++..|+++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~~ 107 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAEV 107 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCEE
Confidence 465555556666666555421 2 23555666665544333221 357899999999998888889999999
Q ss_pred EEEeCCCCCCCCH--HHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccCC--
Q 001990 705 VSVGTDAKGNINI--EELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGL-- 776 (985)
Q Consensus 705 ~~v~~~~~g~iDl--e~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~-- 776 (985)
+.++.++++..+. +.++..++ +++++|++++| |++|.+. | +++|.++|+++|+++++|+++.......
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~ 183 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVL-SEEELEELAELAKKHGILIISDEAYAELVYDGEP 183 (350)
T ss_pred EEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCCcc
Confidence 9999988777665 66666655 78999999998 4689987 5 4555589999999999999985322111
Q ss_pred ----CCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 ----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 ----~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
......+.|+++.++||+|+. +|+++|++++++ ++.+.+.... . ..+.+.+ ..
T Consensus 184 ~~~~~~~~~~~~~~~~~s~~K~~~~----~g~~~G~i~~~~~~~~~~~~~~~-~-----------~~~~~~~------~~ 241 (350)
T cd00609 184 PPALALLDAYERVIVLRSFSKTFGL----PGLRIGYLIAPPEELLERLKKLL-P-----------YTTSGPS------TL 241 (350)
T ss_pred cccccCcCccCcEEEEeecccccCC----cccceEEEecCHHHHHHHHHHHH-H-----------hcccCCC------hH
Confidence 123456789999999999852 467899999988 6665543210 0 0011111 11
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~ 930 (985)
...++...+.... +++.+..++..++++++.+.|++ +..... .+.. ...+.+.+.. +.+...+.+.|.++
T Consensus 242 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~--g~~~~~~~~~-----~~~~~~~~~~l~~~ 312 (350)
T cd00609 242 SQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPSG--GFFLWLDLPE-----GDDEEFLERLLLEA 312 (350)
T ss_pred HHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCc--cEEEEEecCC-----CChHHHHHHHHHhC
Confidence 1122223333221 56677777888899999999987 222211 1111 2223344431 22456677778888
Q ss_pred CCccCCCC-CC--CCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 931 GFHGPTMS-WP--VPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 931 Gi~~~~~~-~p--v~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
||.+.... +. .+..+|++++.. ++|++ +++++|+
T Consensus 313 gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~---~~~~al~ 349 (350)
T cd00609 313 GVVVRPGSAFGEGGEGFVRLSFATP--EEELE---EALERLA 349 (350)
T ss_pred CEEEecccccccCCCCeEEEEeeCC--HHHHH---HHHHHhh
Confidence 99875432 11 357899999877 99999 9999886
No 148
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=6.9e-17 Score=184.31 Aligned_cols=211 Identities=14% Similarity=0.124 Sum_probs=162.1
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l 291 (985)
.+++.+|+|.|.+. +.++++|++++.++++++ +. +||+||+++..|..+...++..++.+|+++.+++. +++
T Consensus 66 ~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~l-l~--~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 66 SLQEAMCELEGGAG--CALYPCGAAAVANAILAF-VE--QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred HHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHH-cC--CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 46789999999876 778999999999888765 33 89999999999999999887777789999999875 456
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCC--cEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g--alliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++ ++++|++|++++| |++|.+.||++|+++||++| ++++|| +.++.+.+.+|.+|||||+++|+ |+|++|-..
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVD-nT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv- 218 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMID-NTWAAGVLFKALDFGIDISIQAGTKYLVGHSDA- 218 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEE-CCCccccccCHHHcCCcEEEEcCcccccCCCcc-
Confidence 66 8889999999998 78999999999999999985 999994 56777888899999999999999 878765322
Q ss_pred CCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 367 GP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
.+|+++.+++..+.+- ..++..|. .. ++. ..|+...|-+-|.-+
T Consensus 219 --~~G~v~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR 262 (395)
T PRK08114 219 --MIGTAVANARCWEQLR-------------------------ENSYLMGQ--MV--DAD-----TAYMTSRGLRTLGVR 262 (395)
T ss_pred --eeEEEEcCHHHHHHHH-------------------------HHHHhccC--CC--CHH-----HHHHHHcCCCcHHHH
Confidence 3577777765443320 00011110 00 111 124556666667778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
.+|+.++|..++++|++++.++
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 8889999999999999885454
No 149
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=2.3e-17 Score=192.14 Aligned_cols=270 Identities=17% Similarity=0.186 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe---C
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---D 287 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~---~ 287 (985)
+...++++.+|+++|.+. +.++++|+.+.++++.++. . ++++|+++...|++....++. .|++++.+ |
T Consensus 99 ~~~~~le~~la~~~g~~~--~~~~~sG~~An~~~l~~l~-~--~g~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d 169 (407)
T PRK07179 99 SPKPQFEKKLAAFTGFES--CLLCQSGWAANVGLLQTIA-D--PNTPVYIDFFAHMSLWEGVRA----AGAQAHPFRHND 169 (407)
T ss_pred hHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhC-C--CCCEEEEECCcCHHHHHHHHH----CCCeEEEecCCC
Confidence 345567789999999876 5678999988877766653 2 679999999999999877643 46665554 5
Q ss_pred chhhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEec
Q 001990 288 LKDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGS 355 (985)
Q Consensus 288 ~~~l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~-----~~----GaDi~v~s 355 (985)
++++++ +++ ++++|++.++ |++|.+.|+++|.++|+++|+++++| +.+++|.....+ .+ ++|++++|
T Consensus 170 ~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S 248 (407)
T PRK07179 170 VDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVD-ESHSLGTHGPQGAGLVAELGLTSRVHFITAS 248 (407)
T ss_pred HHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHhcCCCCCCCEEEee
Confidence 567776 654 4777888777 68999999999999999999999995 344554332111 22 46999999
Q ss_pred C-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001990 356 A-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (985)
Q Consensus 356 ~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y 434 (985)
. |.++. ..|++++++++.+.++.. ..+ + ...+|.+ ++...++.+++
T Consensus 249 ~sK~~g~-------~~G~l~~~~~~~~~~~~~---------~~~-~------------~~~~t~~---~~~~aa~~aal- 295 (407)
T PRK07179 249 LAKAFAG-------RAGIITCPRELAEYVPFV---------SYP-A------------IFSSTLL---PHEIAGLEATL- 295 (407)
T ss_pred chHhhhc-------cCeEEEeCHHHHHHHHHh---------CcC-e------------eeCCCCC---HHHHHHHHHHH-
Confidence 7 87752 257899988876654200 000 0 0012222 13333333333
Q ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee-------cC
Q 001990 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DS 504 (985)
Q Consensus 435 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~-------~~ 504 (985)
..+. ..+++.++..++.+++++.|+++| +++.+.. ..+.+..+. +..+.+.|.++||.++.. ..
T Consensus 296 -~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~--~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~ 369 (407)
T PRK07179 296 -EVIE--SADDRRARLHANARFLREGLSELG-YNIRSES--QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNR 369 (407)
T ss_pred -HHHh--cCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCC--CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCC
Confidence 3332 125677889999999999999987 7766322 233444432 577888999999974321 13
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 505 NTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 505 ~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+.+|++++..+|++|+++++++|..
T Consensus 370 ~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 370 NLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999974
No 150
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.78 E-value=3.5e-17 Score=189.83 Aligned_cols=296 Identities=15% Similarity=0.166 Sum_probs=195.0
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEE
Q 001990 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~ 706 (985)
.+|..++..++++++++++|.+. .+.+++|++++.+++.++ . +++|+|+++++.|..+...+...|.+++.
T Consensus 82 ~~G~~~l~~~l~~~la~~~g~~~-~i~~tsG~~a~~~~~~~l---~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~~~ 152 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLGTED-AILYSSCFDANGGLFETL---L-----GKEDAIISDALNHASIIDGVRLCKAKRYR 152 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEEcChHHHHHHHHHHh---C-----CCCCEEEEEhhhhHHHHHHHHhcCCceEE
Confidence 46777788899999999999774 466677776664443332 1 47789999998887766667788988887
Q ss_pred EeCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC-C---
Q 001990 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S--- 778 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~---~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-~--- 778 (985)
++. .|+++++++++++ +.++++|+.... |.+|.+. ++++|.++|+++|+++++|++|..+..+.. .
T Consensus 153 ~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~-~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~ 226 (397)
T PRK06939 153 YAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA-PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTV 226 (397)
T ss_pred eCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHH
Confidence 765 4899999988742 226777776543 5689887 899999999999999999999853322110 0
Q ss_pred --CC-cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHH
Q 001990 779 --PG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 779 --~g-~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
.+ ..++|++++|+||+|+ |+++|++++++++++.+..... ....++.. ....+.+
T Consensus 227 ~~~~~~~~~~i~~~S~sK~~~------g~r~G~v~~~~~~~~~l~~~~~-----------~~~~~~~~-----~~~~~~a 284 (397)
T PRK06939 227 EHFGVMDRVDIITGTLGKALG------GASGGYTAGRKEVIDWLRQRSR-----------PYLFSNSL-----APAIVAA 284 (397)
T ss_pred HHcCCCCCCcEEEEECHHHhC------ccCceEEEeCHHHHHHHHHhCc-----------cccccCCC-----CHHHHHH
Confidence 01 1246899999999983 4567999988776654421100 00000101 1111222
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
+.+.+..+.. ..+..++..++++++.+.|++ ++.+. .+.+.. +.+.+. .+.+..++++.|.++||.+
T Consensus 285 ~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~-----~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 285 SIKVLELLEE--SDELRDRLWENARYFREGMTAAGFTLG--PGEHPI---IPVMLG-----DAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEEC-----CHHHHHHHHHHHHHCCceE
Confidence 3333444321 134456677888999999987 44432 111222 222222 1234678999999999987
Q ss_pred CCCCCCC----CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 935 PTMSWPV----PGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 935 ~~~~~pv----~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
....++. .+.||++++..++++||+ ++++.|++++++
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~---~~l~~L~~~~~~ 393 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLD---RAIDAFEKVGKE 393 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHH---HHHHHHHHHHHH
Confidence 5433331 357999999999999999 999999988764
No 151
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.3e-17 Score=173.06 Aligned_cols=333 Identities=16% Similarity=0.227 Sum_probs=223.0
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCcccccccc----ccccccccCCCCcchhhhcHHHHHHHHHHHHHH
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPV----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCT 643 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~----~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~ 643 (985)
.++.|..+|++-|+.-. ....|+|++++......+.. +-..| +.....++++.+.+
T Consensus 53 vwD~eGk~ylDflsays------aVnqGhchpki~~aLqeq~~kLtlssraf--------------Ynd~~~~f~~~vt~ 112 (427)
T KOG1402|consen 53 VWDPEGKEYLDFLSAYS------AVNQGHCHPKIIKALQEQADKLTLSSRAF--------------YNDVLGEFAEYVTK 112 (427)
T ss_pred EECCCccchhhhhhhhh------hcccCCCCHHHHHHHHHHHhHhhhhhHHH--------------hhhhHHHHHHHHHH
Confidence 57889999999887653 34579999888765444331 11122 22356688999999
Q ss_pred HhCCCccceecChHHHHHHHHHHHHHHHHH-hcCCCCCC-EEEE-cCCCCCCcHH---------HHHhcC----cEEEEE
Q 001990 644 ITGFDSFSLQPNAGAAGEYAGLMVIRAYHK-ARGDHHRN-VCII-PVSAHGTNPA---------TAAMCG----MKIVSV 707 (985)
Q Consensus 644 l~G~~~~~~~~~sGa~g~~a~l~air~~~~-~~g~~~~~-~Vlv-~~~~Hg~~~~---------~~~~~G----~~v~~v 707 (985)
+||.+.+ +.+|+|++|.+.++..+|.|.. .++..... +|+. ..++||..-. +.+..| ..+..|
T Consensus 113 lf~~~kv-lpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v 191 (427)
T KOG1402|consen 113 LFGYDKV-LPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKV 191 (427)
T ss_pred hcCccee-eecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceee
Confidence 9999875 5689999999999999998754 33332122 3443 5578885422 222222 125567
Q ss_pred eCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCCcC-
Q 001990 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI- 782 (985)
Q Consensus 708 ~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~- 782 (985)
|++ |.++|+.+++ .++.++++++-- ..-|++.|| +++..++|.+|++++|.|+.| .|+.+.|++
T Consensus 192 ~Y~-----d~eale~~l~--~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQ----TGl~RTGk~l 260 (427)
T KOG1402|consen 192 PYG-----DAEALEVALK--SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQ----TGLARTGKLL 260 (427)
T ss_pred ccC-----CHHHHHHHhc--CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhh----hcccccCcEE
Confidence 764 8999999998 378888887643 478888753 999999999999999999876 455566543
Q ss_pred -------CCcEEEeCCcccccccCCCCCC-cceeeeeccccc-CcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHH
Q 001990 783 -------GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLA-PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 783 -------g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~-~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
-+|++.+ .|.|+ ||- .+..+.++++++ .+-||. |+ +++.|+++.+
T Consensus 261 a~d~env~PDivil--gKalS-----GG~~Pvsavl~~~~im~~~~pge----------Hg---------sTyggNpLg~ 314 (427)
T KOG1402|consen 261 ACDYENVRPDIVIL--GKALS-----GGVYPVSAVLADDDIMLNIKPGE----------HG---------STYGGNPLGC 314 (427)
T ss_pred EeehhhcCCCeEEE--ecccc-----CCeeeeEEEEecHHHHhccCCCc----------cc---------cccCCChHHH
Confidence 3798876 38874 442 344444555544 332331 10 2344567777
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---C-Cee--EcCCCCceeEEEEEEecCccccCCCCHHHHHHHH
Q 001990 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---Y-PIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (985)
Q Consensus 854 ~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~-~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L 927 (985)
+.+.++|..+.++.+ .+++..+...|+++|.+. + .++ ..|. ..++.++++.. ...+.++.+++-+|
T Consensus 315 ~vaiAalevi~eekL---~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr--Gl~~ai~i~~~---~~~~~~aw~~cl~l 386 (427)
T KOG1402|consen 315 AVAIAALEVIVEEKL---VERAAKLGEILRDQLNKLQKKFPHVVKEVRGR--GLLNAIVINPS---KTSGQDAWDVCLAL 386 (427)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhccccccchhheeecc--ceEEEEEeccc---cccchhHHHHHHcc
Confidence 777888888876644 456667788889888762 1 111 1222 23344455432 12357888999999
Q ss_pred HHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 928 MDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 928 ~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.++|.++.+.. .+-+|++|....+++|++ .-++++++.+
T Consensus 387 k~~g~LAkptH---~~IiRfaPPL~I~e~dl~---eg~e~i~k~i 425 (427)
T KOG1402|consen 387 KENGLLAKPTH---GNIIRFAPPLVISEEDLR---EGIEAIEKTI 425 (427)
T ss_pred cccccccCCCC---CCeEEecCCcccCHHHHH---HHHHHHHHHh
Confidence 99999985433 368999999999999999 9988887754
No 152
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.77 E-value=9.6e-18 Score=189.81 Aligned_cols=286 Identities=19% Similarity=0.240 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.+.+.++.+|++||.+.+.|.+|++++|+.++++++. +++++||+++++|.+....+.+.|++++++++..+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~--------~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC--------RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT--------TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc
Confidence 4889999999999999998899999999988887764 47899999999999998899999999999987422
Q ss_pred -----CCCCH-----HHHHHHHHhcCCCeEE---EEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC--
Q 001990 713 -----GNINI-----EELRKAAEANRDNLST---LMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-- 777 (985)
Q Consensus 713 -----g~iDl-----e~L~~~i~~~~~~t~~---Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-- 777 (985)
+.+++ ++++++|+++ ++.++ |++++|+++|++. |+++|+++||++|.+|+||+||.. +.+|.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~-p~~k~~~~vvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGa-h~~F~~l 215 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEH-PDAKAPRLVVLTSPTYYGVCY-DIKEIAEICHKHGIPLLVDEAHGA-HFGFHPL 215 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHC-TTCHCESEEEEESS-TTSEEE--HHHHHHHHCCTECEEEEE-TT-T-TGGCSGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhC-ccccCceEEEEeCCCCCeEEE-CHHHHHHHhcccCCEEEEEccccc-cccCCCC
Confidence 35677 9999999987 45444 9999999999998 999999999999999999999853 33332
Q ss_pred --CCCcCCCc-------EEEeCCcccccccCCCCCCcceeeeecccc-cC--cCCCCccccCCCCCCCCCCCCCCCcccc
Q 001990 778 --SPGYIGAD-------VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-AP--FLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (985)
Q Consensus 778 --~~g~~g~D-------i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l-~~--~lpg~~~g~~~~~~~~~~~~~t~~i~s~ 845 (985)
..-.+|+| +++.|.||+++... ..+++.++... +. .+.. .+. .-..|++
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~alt-----Qts~lh~~~~~~v~~~~~~~-~l~---------~~~TTSP---- 276 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPALT-----QTSMLHVKGDRIVDHERVNE-ALS---------MHQTTSP---- 276 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-T-----T-EEEEEETCCCTTHHHHHH-HHH---------HHS-SS-----
T ss_pred ccchhhccCccccccceeeeechhhcccccc-----cceEEEecCCCcccHHHHHH-HHH---------HHcCCCh----
Confidence 12357899 99999999995322 45677776543 21 1100 000 0011221
Q ss_pred cchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh---c--cCCee----EcCCC------------------
Q 001990 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE---K--HYPIL----FRGVN------------------ 898 (985)
Q Consensus 846 ~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~---~--~~~i~----~~g~~------------------ 898 (985)
.|-....+..|..+|. +.+| ++..++..+++..++++|+ + ++.+. ..++.
T Consensus 277 SY~lmASlD~a~~~m~--~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~ 353 (417)
T PF01276_consen 277 SYPLMASLDVARAQME--EEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLAD 353 (417)
T ss_dssp -HHHHHHHHHHHHHHS--HHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--T
T ss_pred HHHHHHHHHHHHHHHh--hhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhccc
Confidence 1111111222333330 3344 2355667788888888883 3 22221 11100
Q ss_pred -----CceeEEEEEEecCc-----cccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHH
Q 001990 899 -----GTVAHEFIVDLRGL-----KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKV 956 (985)
Q Consensus 899 -----~~~~~~~vv~~~~~-----~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~e 956 (985)
+|. -+++.++++ ....|+++..+.+.|.++||.+.... ...+.+-++...|++
T Consensus 354 ~~~~lDP~--K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 354 DYYMLDPT--KLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---LYNVLFLFTIGDTKE 416 (417)
T ss_dssp TSEEE-TT--EEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---SSEEEEE--TTS-HH
T ss_pred CccccCCc--EEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---CccEEEEecCCCCCC
Confidence 111 123333211 02357899999999999999986432 256777777777764
No 153
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.77 E-value=7.1e-18 Score=190.88 Aligned_cols=266 Identities=18% Similarity=0.196 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..|.|.|+.+|+++|++.+++ +++|+|.++.++++++. . +||+||+++++|.|+...+.. .|++++++++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~f-lvnGsT~g~~a~i~a~~-~--~gd~VLv~RN~HkSv~~alil----~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFF-LVNGSTSGNQAMIMALC-R--PGDKVLVDRNCHKSVYNALIL----SGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEE-ESSHHHHHHHHHHHHHT-T--TTCEEEEETT--HHHHHHHHH----HTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEE-EecCchHHHHHHHHHhc-C--CCCEEEEcCCcHHHHHHHHHH----cCCeEEEecCCc
Confidence 457889999999999998766 78899999999998864 3 899999999999999998753 4888888754
Q ss_pred ----------------hhhhc-c--CCCEeE---EEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE----eccccccCCC
Q 001990 289 ----------------KDIDY-K--SGDVCG---VLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 342 (985)
Q Consensus 289 ----------------~~l~~-l--~~~t~~---V~v~~pn~~G~i~dl~~I~~~a~~~galliV~----a~~~alg~l~ 342 (985)
+++++ + .++.++ |++++|||+|.+.|+++|+++||++|.+++|| ++.....+..
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 23333 2 355555 99999999999999999999999999999993 3322223334
Q ss_pred CCCcccce-------EEEecC-ccccccCCCCCCceEEEEEchhh-HhcCCCceeeeeecCCCCcceEEecccccccccc
Q 001990 343 PPGELGAD-------IVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (985)
Q Consensus 343 ~p~~~GaD-------i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~-~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rr 413 (985)
+.-.+||| +++.|. |.++.- . ++++++++.+. ++. . |.
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~al-t----Qts~lh~~~~~~v~~---------------~-------------~~ 264 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPAL-T----QTSMLHVKGDRIVDH---------------E-------------RV 264 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS--T----T-EEEEEETCCCTTH---------------H-------------HH
T ss_pred chhhccCccccccceeeeechhhccccc-c----cceEEEecCCCcccH---------------H-------------HH
Confidence 45679999 999999 777542 2 56889887643 110 0 00
Q ss_pred cccCCCccchhHHHHHHHHHH--HHHc-CcchHHHHHHHHHHHHHHHHHHH---hcCCCEEEcCC-----CC--------
Q 001990 414 DKATSNICTAQALLANMAAMY--AVYH-GPEGLKTIAQRVHGLAGTFALGL---KKLGTVEVQGL-----PF-------- 474 (985)
Q Consensus 414 e~atsni~t~~~l~a~~aa~y--~~~~-g~~Gl~~i~~~~~~~a~~l~~~L---~~~g~~~~~~~-----~~-------- 474 (985)
..+-+-.-|+++.|.++|++- ..++ +.+| +++.++..+++..+|++| +++.+|+++++ +.
T Consensus 265 ~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 343 (417)
T PF01276_consen 265 NEALSMHQTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGE 343 (417)
T ss_dssp HHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccc
Confidence 011111225578888999883 2344 3445 567788889999999999 55534777632 11
Q ss_pred --------------cce--EEEecC-----------C--HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHH
Q 001990 475 --------------FDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 518 (985)
Q Consensus 475 --------------~~~--~~i~~~-----------~--~~~l~~~L~~~Gi~~~~~~~~~lris~~~~~t~e 518 (985)
+++ ++|.+| + +..+.+.|+++||.++..+...+++-++...|++
T Consensus 344 ~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 344 NWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred cchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 232 556542 2 7889999999999999988899999999988875
No 154
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.77 E-value=6.9e-17 Score=186.47 Aligned_cols=301 Identities=12% Similarity=0.097 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.+.++++.+|+++|.+.+ +.+++|..++.+++.++. +++|+||+++..|++....+.+.++++++++++
T Consensus 44 ~~~~LE~~lA~~~g~e~a-l~~~sG~~a~~~~i~~l~--------~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-- 112 (392)
T PLN03227 44 AHLELEQCMAEFLGTESA-ILYSDGASTTSSTVAAFA--------KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-- 112 (392)
T ss_pred HHHHHHHHHHHHhCCCcE-EEecCcHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCC--
Confidence 467899999999999864 556667655544444331 478999999998887766667788888888774
Q ss_pred CCCCHHHHHHHHHhc-----------CCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC---
Q 001990 713 GNINIEELRKAAEAN-----------RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--- 777 (985)
Q Consensus 713 g~iDle~L~~~i~~~-----------~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~--- 777 (985)
|++++++.++.. .+++++|+++.+ |+.|.+. |+++|+++|+++|+++++|++|..+..+-.
T Consensus 113 ---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g 188 (392)
T PLN03227 113 ---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFHYRLILDESFSFGTLGKSGRG 188 (392)
T ss_pred ---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcCCEEEEECcccccccCCCCCc
Confidence 556665544321 136788888877 5789987 899999999999999999999863322210
Q ss_pred ------CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 778 ------SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 778 ------~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
.....++|+++++++|.+ ||.+|++++++++.+.+.....+ .+...+. .+.
T Consensus 189 ~~~~~g~~p~~~~Div~~slsk~~-------g~~gg~v~~~~~~~~~~~~~~~~------------~~~~~~~----~p~ 245 (392)
T PLN03227 189 SLEHAGLKPMVHAEIVTFSLENAF-------GSVGGMTVGSEEVVDHQRLSGSG------------YCFSASA----PPF 245 (392)
T ss_pred HHHHcCCCCCCCceEEEeechhhh-------hccCcEEecCHHHHHHHHHhCcC------------ccccCCC----CHH
Confidence 011246799999988876 35667787887665433210000 0000010 111
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCC------CceeEEEEEEecCccccC----CCCH
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVN------GTVAHEFIVDLRGLKNTA----GIEP 920 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~------~~~~~~~vv~~~~~~~~~----g~~~ 920 (985)
.+.++.+.+..+.. ..+..++..+++++|+++|++ ++..+..... ....+.+.+.+.+.+... ....
T Consensus 246 ~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 323 (392)
T PLN03227 246 LAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLIL 323 (392)
T ss_pred HHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHH
Confidence 22223333322211 124556778889999999975 3321100000 001112334442100000 0012
Q ss_pred HHHHHHHHHCCCccCCC------CCC-C-CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 921 EDVAKRLMDYGFHGPTM------SWP-V-PGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 921 ~~l~~~L~e~Gi~~~~~------~~p-v-~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.++.+.|.++|+.+... .+| + +..||++++..+|+|||| +++++|+++++++.
T Consensus 324 ~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~---~~~~~l~~~~~~~~ 384 (392)
T PLN03227 324 DQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDID---KLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHH---HHHHHHHHHHHHHH
Confidence 47889999999986321 111 2 478999999999999999 99999999988764
No 155
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.77 E-value=1.9e-16 Score=165.47 Aligned_cols=324 Identities=16% Similarity=0.167 Sum_probs=220.1
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCC-CcceeeccchHHHHHHHHHHh
Q 001990 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCN 248 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~-~~~~sl~~~~ta~~ea~~~a~ 248 (985)
.+|.| |.-+|..|.+ ..+++.. +-..||..| .+.+..+-+--.+... .....+-.+|+.++|+++..+
T Consensus 20 L~gPG--Psnl~~~V~~-A~~~~~l----gh~sPe~~q----Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 20 LLGPG--PSNLSGRVQE-AMSRPSL----GHMSPEFVQ----IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL 88 (385)
T ss_pred eecCC--CcCCCHHHHH-hhcCCcc----ccCCHHHHH----HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh
Confidence 67888 5668999984 4565532 334667543 3333333333334332 223556678899999987654
Q ss_pred hhhcCCCCEEEEcC-CCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-c-CCCEeEEEEEcC-CCCeeecc-H
Q 001990 249 NIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-K-SGDVCGVLVQYP-GTEGEVLD-Y 315 (985)
Q Consensus 249 ~~~~~~g~~Vlv~~-~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l-~~~t~~V~v~~p-n~~G~i~d-l 315 (985)
+. +||+|++-. +.+.....-+ +++.|++|..++. +++.+ + ....++|+|++. +.+|+++| +
T Consensus 89 -le--Pgd~vLv~~~G~wg~ra~D~---~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~ 162 (385)
T KOG2862|consen 89 -LE--PGDNVLVVSTGTWGQRAADC---ARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLL 162 (385)
T ss_pred -cC--CCCeEEEEEechHHHHHHHH---HHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHH
Confidence 23 899988555 6665433333 4567888877742 45544 4 346788988886 78999999 6
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeec
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d 393 (985)
+.+.++||+++++++|++ ..|+|..+ .-.+||+|++...+ |.|+.| ||+++++.+++.++++-.|--
T Consensus 163 ~~~g~lc~k~~~lllVD~-VaSlggt~F~mDewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~----- 231 (385)
T KOG2862|consen 163 AISGELCHKHEALLLVDT-VASLGGTEFEMDEWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKT----- 231 (385)
T ss_pred HHHHHHhhcCCeEEEEec-hhhcCCccceehhhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccC-----
Confidence 778899999999999954 34777654 34799999988877 888877 578899999988887743321
Q ss_pred CCCCcceEEecccccccc------cccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCE
Q 001990 394 SSGKPALRVAMQTREQHI------RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (985)
Q Consensus 394 ~~g~~~~~l~l~tre~~~------rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 467 (985)
+...|+++...+-+.+ |+...|..+ +.+|++.+|+ +.+-+||+++..+|+.+++++++..|+++| +
T Consensus 232 --~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv---~lly~Lr~AL--~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G-L 303 (385)
T KOG2862|consen 232 --KPVSFYFDILRLGNFWGCDGEPRAYHHTPPV---QLLYSLRAAL--ALIAEEGLENSWRRHREMSKWLKLSLEALG-L 303 (385)
T ss_pred --CceEEEEeHHhhcchhccCCcccccccCCcH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-c
Confidence 1123555532222221 344455555 8999999997 778899999999999999999999999998 8
Q ss_pred EEcC--C-CCcceE-EEecCC---HHHHHHHHHHc-Cceee----eecCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 001990 468 EVQG--L-PFFDTV-KVKCAD---AHAIASAAYKI-EMNLR----VVDSNTVTASFDET-TTLEDVDKLFIVFAG 529 (985)
Q Consensus 468 ~~~~--~-~~~~~~-~i~~~~---~~~l~~~L~~~-Gi~~~----~~~~~~lris~~~~-~t~edid~ll~~l~~ 529 (985)
++.. + ...+++ ++.+|. ..+++.++.++ ++.+. ...+..+||.+.-- -+.+-|+..++.|+.
T Consensus 304 q~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~ 378 (385)
T KOG2862|consen 304 QLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKL 378 (385)
T ss_pred cceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHH
Confidence 8762 2 334443 234442 77888888876 55543 23456789887654 467778888877764
No 156
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.77 E-value=1e-16 Score=185.03 Aligned_cols=300 Identities=13% Similarity=0.117 Sum_probs=190.4
Q ss_pred hhcHHHHHHHHHHHHHHHhC--CCccceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G--~~~~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
.+|..++.+.+.+++.+.+| .+...+.. ++++++...+ ++.+. .++++|+++++.|..+...++..|++
T Consensus 60 ~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~---~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 131 (382)
T PRK06108 60 NLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA---AQALV-----GPGDEVVAVTPLWPNLVAAPKILGAR 131 (382)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH---HHHhc-----CCCCEEEEeCCCccchHHHHHHCCCE
Confidence 36777777788888888878 44444444 4555544322 22221 36788999998888777778889999
Q ss_pred EEEEeCCCC---CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccccC--
Q 001990 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG-- 775 (985)
Q Consensus 704 v~~v~~~~~---g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~g-- 775 (985)
++.+|.+.+ +.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++......
T Consensus 132 ~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 208 (382)
T PRK06108 132 VVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG 208 (382)
T ss_pred EEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC
Confidence 999998642 4699999999986 68899999999 5789775 25899999999999999999987422111
Q ss_pred CCCC------CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 776 LTSP------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 776 ~~~~------g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
-..+ ....-.+++.|++|+|+. .|.++|++++++++++.+.... . ..+...+
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~RiG~~~~~~~~~~~~~~~~-~-----------~~~~~~~------ 266 (382)
T PRK06108 209 GRAPSFLDIAEPDDRIIFVNSFSKNWAM----TGWRLGWLVAPPALGQVLEKLI-E-----------YNTSCVA------ 266 (382)
T ss_pred CCCCCHhhcCCCcCCEEEEeechhhccC----cccceeeeeCCHHHHHHHHHHH-H-----------hcccCCC------
Confidence 0001 011234778899998854 4678999999877665442110 0 0011111
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~- 928 (985)
.....++...+. .+.+.+++..++..++.+++.+.|++...+.+..+.+.. .+.++++. ..+..++++.|.
T Consensus 267 ~~~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~--~~~~~l~~-----~~~~~~~~~~ll~ 338 (382)
T PRK06108 267 QFVQRAAVAALD-EGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAM--YAFFRIPG-----VTDSLALAKRLVD 338 (382)
T ss_pred hHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE--EEEEeCCC-----CCCHHHHHHHHHH
Confidence 111122223332 233345566666777788888888763222222222221 12345431 246678988885
Q ss_pred HCCCccCCC-CC-C-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 929 DYGFHGPTM-SW-P-VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 929 e~Gi~~~~~-~~-p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
++||.+... .| + ..+.+|++++. ++++++ ..++.|++++
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~---~~l~~l~~~l 380 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLD---EAVERLRRFL 380 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHH---HHHHHHHHHH
Confidence 579987321 12 1 25789999987 788888 8888877654
No 157
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.77 E-value=5.8e-17 Score=187.19 Aligned_cols=290 Identities=14% Similarity=0.123 Sum_probs=187.0
Q ss_pred cHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEe
Q 001990 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~ 708 (985)
|......++++++++++|.+. .+++++|+++.++ +++.+ .+++++|++++.+|+.+...+...|.+++.++
T Consensus 81 g~~~~~~~l~~~la~~~~~~~-~i~~~~g~~~~~~---~l~~~-----~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~ 151 (385)
T PRK05958 81 GNSPAHEALEEELAEWFGAER-ALLFSSGYAANLA---VLTAL-----AGKGDLIVSDKLNHASLIDGARLSRARVRRYP 151 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHh-----CCCCCEEEEeCccCHHHHHHHHhcCCceEEeC
Confidence 444567789999999999653 4666777765533 33322 14678999999888877777788899998887
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC--------CC
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--------SP 779 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~--------~~ 779 (985)
. .|+++++++++..+++++++++..+ |.+|... ++++|+++|+++|+++++|++|..+..+.. ..
T Consensus 152 ~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~-~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~ 225 (385)
T PRK05958 152 H-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLA-PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGL 225 (385)
T ss_pred C-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC-CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCC
Confidence 5 3899999999743224666666555 4689887 899999999999999999999954432210 01
Q ss_pred CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHH
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
.....++++.++||+|+. +| |+++.++++.+.+.... +...... .. .+..++++.+.
T Consensus 226 ~~~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~aa~~aa 282 (385)
T PRK05958 226 AGEPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINRA-----------RPFIFTT-AL----PPAQAAAARAA 282 (385)
T ss_pred CCCCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHhC-----------ccceecC-CC----CHHHHHHHHHH
Confidence 112234778899999842 23 67777766554331100 0000000 01 11222333444
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC
Q 001990 860 IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (985)
Q Consensus 860 l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~ 938 (985)
++.+... .+..++..++++++.+.|++ ++++. .+.+. .+.+.++ ...+..++.+.|.++||.+....
T Consensus 283 l~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~---~~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~ 350 (385)
T PRK05958 283 LRILRRE--PERRERLAALIARLRAGLRALGFQLM--DSQSA---IQPLIVG-----DNERALALAAALQEQGFWVGAIR 350 (385)
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCC---EEEEEeC-----CHHHHHHHHHHHHHCCceEeccc
Confidence 5444322 34556777888899999987 45432 12222 2334443 12346789999999999985432
Q ss_pred CC----CCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 939 WP----VPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 939 ~p----v~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
.+ .++.+||+++..+|++|+| ++++.|+++
T Consensus 351 ~~~~~~~~~~lRis~~~~~~~~~i~---~~l~~l~~~ 384 (385)
T PRK05958 351 PPTVPAGTSRLRITLTAAHTEADID---RLLEALAEA 384 (385)
T ss_pred CCCCCCCCceEEEEecCCCCHHHHH---HHHHHHHhc
Confidence 21 1368999999999999999 999998765
No 158
>PLN02483 serine palmitoyltransferase
Probab=99.77 E-value=1.5e-16 Score=188.13 Aligned_cols=316 Identities=17% Similarity=0.201 Sum_probs=204.1
Q ss_pred CCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH
Q 001990 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (985)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea 243 (985)
|....||||.+-.+...++.+.+++. +. .+. ...+....|+.+.+.++++.+|+++|.+. +.++.+|+++..+
T Consensus 104 n~~s~~YLgl~~~~~~~~~~~~~ai~-~~--g~~--~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~ 176 (489)
T PLN02483 104 NLGSYNYLGFAAADEYCTPRVIESLK-KY--SAS--TCSSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNST 176 (489)
T ss_pred EeecCCccCcCCCCHHHHHHHHHHHH-Hh--CCC--CCccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHH
Confidence 33456899998533334444444533 32 222 22344456778889999999999999765 5677777766655
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhhhc-c-------CCCE-----eEEEEEcC-
Q 001990 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K-------SGDV-----CGVLVQYP- 306 (985)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l~~-l-------~~~t-----~~V~v~~p- 306 (985)
++.++ .. +||+|++++..|+++...++ ..|++++.++. +++++ + .++| +.+++..+
T Consensus 177 ~i~al-~~--~Gd~Vi~d~~~h~s~~~~~~----~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 177 IIPAL-IG--KGGLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred HHHHh-CC--CCCEEEEcchhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 55443 23 89999999999999988764 35788877743 44443 2 1333 55555544
Q ss_pred -CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC----------CcccceEEEecC-ccccccCCCCCCceEEEE
Q 001990 307 -GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (985)
Q Consensus 307 -n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p----------~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~ 374 (985)
|+.|.+.|+++|+++|+++|+++++| +.+++|.+... ...++||+++|. |+|+.+ | |+++
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~livD-Ea~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~---G----G~i~ 321 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYLD-EAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC---G----GYIA 321 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEE-CcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC---c----eEEE
Confidence 77999999999999999999999994 44555433211 124689999998 988631 2 7999
Q ss_pred EchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH-cCcch---HHHHHHHH
Q 001990 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY-HGPEG---LKTIAQRV 450 (985)
Q Consensus 375 ~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~-~g~~G---l~~i~~~~ 450 (985)
.++++++.+.... +++. . ++ .+++....+..+++ .. .+.+| ..+..++.
T Consensus 322 ~~~~li~~l~~~~----------~~~~------------~-~~--~~~p~~~~~~~aaL--~~l~~~~g~~~~~~~~~~l 374 (489)
T PLN02483 322 GSKELIQYLKRTC----------PAHL------------Y-AT--SMSPPAVQQVISAI--KVILGEDGTNRGAQKLAQI 374 (489)
T ss_pred cCHHHHHHHHHhC----------cccc------------c-cC--CcCHHHHHHHHHHH--HHHHhCccccchHHHHHHH
Confidence 8888877652100 0000 0 00 11112222223333 22 22222 24456788
Q ss_pred HHHHHHHHHHHhcCCCEEEcCCCCcce--EEEecCC-HHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHH
Q 001990 451 HGLAGTFALGLKKLGTVEVQGLPFFDT--VKVKCAD-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDV 520 (985)
Q Consensus 451 ~~~a~~l~~~L~~~g~~~~~~~~~~~~--~~i~~~~-~~~l~~~L~~~Gi~~~~~-------~~~~lris~~~~~t~edi 520 (985)
.++.+++++.|+++| +++........ +.+..+. ..++.+.|.++||.+... ..+.+|+|++..+|++||
T Consensus 375 ~~~~~~l~~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edI 453 (489)
T PLN02483 375 RENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDL 453 (489)
T ss_pred HHHHHHHHHHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHH
Confidence 899999999999997 87763221112 2222222 668999999999987532 126899999999999999
Q ss_pred HHHHHHHhC
Q 001990 521 DKLFIVFAG 529 (985)
Q Consensus 521 d~ll~~l~~ 529 (985)
++++++|..
T Consensus 454 d~~l~~L~~ 462 (489)
T PLN02483 454 IKALEVISE 462 (489)
T ss_pred HHHHHHHHH
Confidence 999999974
No 159
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.76 E-value=8.6e-17 Score=185.95 Aligned_cols=295 Identities=15% Similarity=0.157 Sum_probs=191.8
Q ss_pred hhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEE
Q 001990 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~ 706 (985)
.+|..++..++++++++++|.+. .++.++|+++.++++.+ +. ++++.|++++..|+.+...+...|++++.
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~-~i~~~sG~~a~~~a~~~---~~-----~~gd~vi~~~~~~~~~~~~~~~~g~~~~~ 143 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEA-ALVFQSGFNTNQGVLSA---LL-----RKGDIVLSDELNHASIIDGLRLTKATKKI 143 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHHHHH---hC-----CCCCEEEEEccccHHHHHHHHhcCCceEE
Confidence 35667788899999999999765 46667787765433332 21 46788999888887776666778888876
Q ss_pred EeCCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCC-C------
Q 001990 707 VGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-T------ 777 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~-~------ 777 (985)
++ .+|++++++.+++.. +++++|++.++ |.+|.+. |+++|+++|++||+++++|+++..+..+. .
T Consensus 144 ~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 144 YK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred eC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 64 368999999887432 36888877765 5789988 89999999999999999999985432210 0
Q ss_pred CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHH
Q 001990 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 778 ~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
..-..+.|+++.+++|+|+. +| |+++.++++.+.+.... .....++. . .+....++.
T Consensus 218 ~~~~~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~~-~----~~~~~~a~~ 274 (385)
T TIGR01825 218 FGLEDKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNRA-----------RPFLFSTA-Q----PPAVVAALA 274 (385)
T ss_pred cCCCcCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHhC-----------ccccccCC-C----CHHHHHHHH
Confidence 00124578889999999842 33 77877776655432100 00000010 0 111222233
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 858 a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
+.+..+... .+..++..++++++.+.|++ ++++. .+..+. +.+.+.. ..+..++++.|.++||.++.
T Consensus 275 ~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~L~~~gi~v~~ 342 (385)
T TIGR01825 275 AAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTG--GSETPI---TPVVIGD-----EKAAQEFSRRLFDEGIFAQS 342 (385)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEECC-----HHHHHHHHHHHHHCCcEEcc
Confidence 444433221 13445566778899999987 45442 222222 2222220 12356899999999998754
Q ss_pred CCCCC----CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 937 MSWPV----PGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 937 ~~~pv----~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
..+|. .+.||++++..+|+||++ +++++|++++++
T Consensus 343 ~~~~~~~~~~~~iRi~~~~~~~~e~i~---~~~~~l~~~~~~ 381 (385)
T TIGR01825 343 IVFPTVPRGTARIRNIPTAEHTKDDLD---QALDAYEKVGKE 381 (385)
T ss_pred cCCCCCCCCCceEEEEEcCCCCHHHHH---HHHHHHHHHHHH
Confidence 33331 267999999999999999 999999988754
No 160
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.76 E-value=1.7e-16 Score=184.58 Aligned_cols=289 Identities=17% Similarity=0.184 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHh-cCCC-CCCEEEE-cCCCCCCcHHHHHhc---------
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCII-PVSAHGTNPATAAMC--------- 700 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~-~g~~-~~~~Vlv-~~~~Hg~~~~~~~~~--------- 700 (985)
...++++.+++++|.+. .++++||++++++++.++|.|... +|.. ++++||+ +..+||.........
T Consensus 84 ~~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 84 QLAPLYEELAALTGSHK-VLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 46688999999998764 477899999999999988876422 1221 2355554 667898765443211
Q ss_pred ---CcEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEccccccc
Q 001990 701 ---GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 701 ---G~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
...+..+|. .|+++++++++ +++++|++++| |.+|.+.+ ++++|+++|++||+++++|++|. ++
T Consensus 163 ~~~~~~~~~~~~-----~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~ 233 (401)
T PRK00854 163 GPFTPGFRVVPF-----GDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GL 233 (401)
T ss_pred CCCCCCeEEeCC-----CCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 123444544 48999999997 78999999988 57888862 19999999999999999999985 33
Q ss_pred cCCC-----CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 774 VGLT-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 774 ~g~~-----~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
+-.. ......+|+++++ |+|+ +|...+|++++++++.+.+.... + .. ..+ +
T Consensus 234 g~~g~~~~~~~~g~~~D~~~~~--K~l~----gg~~~ig~v~~~~~~~~~l~~~~---------~---~~--t~~----~ 289 (401)
T PRK00854 234 GRTGKLLAEEHEGIEADVTLIG--KALS----GGFYPVSAVLSNSEVLGVLKPGQ---------H---GS--TFG----G 289 (401)
T ss_pred CCCchHhHHhhcCCCCCEEEec--cccc----CCccCeEEEEEcHHHHhcccCCC---------C---CC--CCC----c
Confidence 2111 0011246888774 8884 23356888988888776553210 0 00 111 1
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCee--EcCCCCceeEEEEEEecCccccCCCCHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~ 925 (985)
++..++++.+.|..+..+++ .++..++++++.+.|++ ..... ..+. +. .+.+.+.. ...+..++++
T Consensus 290 ~~~~~aa~~a~L~~l~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~g~-g~---~~~i~~~~----~~~~~~~~~~ 358 (401)
T PRK00854 290 NPLACAVARAALKVLTEEGM---IENAAEMGAYFLEGLRSIRSNIVREVRGR-GL---MLAVELEP----EAGGARQYCE 358 (401)
T ss_pred CHHHHHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHhhccCceEEEecc-ce---EEEEEEec----CchhHHHHHH
Confidence 33334445566665543333 35566778889998876 33221 1111 11 22333321 1234678999
Q ss_pred HHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 926 ~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.|.++||.+.... .+.||++|+..+|++||| ++++.|++++
T Consensus 359 ~L~~~GV~v~~~~---~~~lR~~p~~~~t~e~i~---~~i~~l~~~l 399 (401)
T PRK00854 359 ALKERGLLAKDTH---DHTIRLAPPLVITREQVD---WALEQIAKVL 399 (401)
T ss_pred HHHHCCeEEecCC---CCEEEEeCCcccCHHHHH---HHHHHHHHHh
Confidence 9999999975321 378999999999999999 9999998765
No 161
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.76 E-value=2.3e-17 Score=187.90 Aligned_cols=280 Identities=15% Similarity=0.176 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhCCCccceecChHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa-~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++.+++++|++...+.+++|+ ++...+ ++.+. .++++|+++++.|+.+...++..|++++.++.++++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~---~~~l~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELL---IRAFL-----EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHH---HHHhc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 478899999999876555554454 443222 22221 357899999886655555567899999999998888
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEEccccccccCCCCC----CcCCCcE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP----GYIGADV 786 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~--g~lliVD~a~~~~~~g~~~~----g~~g~Di 786 (985)
.+|+++++++++ +++++|++++| |++|.+. +++++.++|+.+ |+++++|+++.. +..-..+ .....++
T Consensus 129 ~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~l~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 129 QLDLEDILVAID---DKPKLVFLCSPNNPTGNLL-SRSDIEAVLERTPEDALVVVDEAYGE-FSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-hcCCccHHHHHhhCCCEE
Confidence 899999999876 78999999998 5799998 899999999887 999999999741 1111011 1122346
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++.|++|+|+. +|+++|++++++++.+.+.... ...+.+ .....++.+++... .
T Consensus 204 ~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~------~~~~~~~~~~l~~~--~ 257 (346)
T TIGR01141 204 VLRTLSKAFGL----AGLRIGYAIANAEIIDALNKVR--------------APFNLS------RLAQAAAIAALRDD--D 257 (346)
T ss_pred EEehhhHhhhc----hhhhceeeecCHHHHHHHHhcc--------------CCCCCC------HHHHHHHHHHhCCH--H
Confidence 67888999853 4678999999887766543210 001111 11112222333221 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-C-CCCCE
Q 001990 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-PVPGT 944 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~-pv~~~ 944 (985)
.+.+..++..++++++++.|++...+...++.+. .+.++++ + +.+++.++|.++||.+.... + ..++.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~---~~~~~~~------~-~~~~~~~~L~~~gI~v~~g~~f~~~~~~ 327 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN---FVLIRFP------R-DADALFEALLEKGIIVRDLNSYPGLPNC 327 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCC---EEEEecC------C-CHHHHHHHHHHCCeEEEeCCCcCCCCCe
Confidence 3555566677788889998876212222221121 2345543 2 67889999999999875332 2 12588
Q ss_pred EEEeccCCCCHHhhchHHHHHHHHH
Q 001990 945 LMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 945 lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
+|++++ +++|++ +++++|+
T Consensus 328 iRls~~---~~~~i~---~~~~~l~ 346 (346)
T TIGR01141 328 LRITVG---TREEND---RFLAALR 346 (346)
T ss_pred EEEecC---CHHHHH---HHHHHhC
Confidence 999974 899999 9998773
No 162
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=1.3e-16 Score=185.37 Aligned_cols=282 Identities=18% Similarity=0.198 Sum_probs=186.6
Q ss_pred HHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 635 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 635 ~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
.++++++++++|.+ ...+++++|++++++++.+++.+ ++++||. ...+||.........|.
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~-------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH-------CCCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 47888999998854 24577789999887777766542 2345555 45788876665543332
Q ss_pred ---EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccC
Q 001990 703 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVG 775 (985)
Q Consensus 703 ---~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g 775 (985)
++..+|+ .|+++++++++ +++++|+++.+ |.+|.+.++ +++|.++|++||+++|+|+++. +++-
T Consensus 161 ~~~~~~~~~~-----~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr 231 (398)
T PRK03244 161 LPGGVEHVPY-----GDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGR 231 (398)
T ss_pred CCCCceEeCC-----CCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcc
Confidence 2333443 38999999886 68999999876 678888633 8999999999999999999984 2211
Q ss_pred CCC-----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 776 LTS-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 776 ~~~-----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
... .....+|++++ .|+|+ +|.++|++++++++.+.+..... .. ++.+++
T Consensus 232 ~g~~~~~~~~~~~pDi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~~------------~~------t~~~~~ 286 (398)
T PRK03244 232 TGAWFAHQHDGVTPDVVTL--AKGLG-----GGLPIGACLAFGPAADLLTPGLH------------GS------TFGGNP 286 (398)
T ss_pred cchHHhhhhhCCCCCEEEE--chhhh-----CCcccEEEEEcHHHHhhccCCCC------------cC------CCCCCH
Confidence 100 01123788766 48884 34568888888877665432100 00 112244
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCee--EcCCCCceeEEEEEEecCccccCCCCHHHHHHHH
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L 927 (985)
..++++.++|..+..+.+ .++..++.++|++.|++ ++++. ..+. + . .+.+.++ ......+.++|
T Consensus 287 ~~~aaa~a~l~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~v~g~-g-~--~~~i~~~------~~~~~~~~~~l 353 (398)
T PRK03244 287 VACAAALAVLDTIASEGL---LENAERLGEQLRAGIEALGHPLVDHVRGR-G-L--LLGIVLT------APVAKAVEAAA 353 (398)
T ss_pred HHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHhcCCCceeeEeec-c-E--EEEEEEe------ccHHHHHHHHH
Confidence 555666777776655443 34666778889999986 33221 1111 1 1 2233332 12457889999
Q ss_pred HHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 928 MDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 928 ~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.++|+.+.... ++.||++|+..+|++||| +++++|++++.+++
T Consensus 354 ~~~Gv~~~~~~---~~~iR~~p~~~~t~~~i~---~~~~~l~~~l~~~~ 396 (398)
T PRK03244 354 REAGFLVNAVA---PDVIRLAPPLIITDAQVD---AFVAALPAILDAAA 396 (398)
T ss_pred HHCCeEEeecC---CCEEEEECCCcCCHHHHH---HHHHHHHHHHHhcc
Confidence 99999985432 378999999999999999 99999999987654
No 163
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.76 E-value=6.8e-17 Score=183.83 Aligned_cols=264 Identities=15% Similarity=0.125 Sum_probs=187.0
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCC--CcceeeccchHHHHHHHHHHhhhh-----------cCCCCEEEEcCCCChhHHHH
Q 001990 205 IAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----------KGKKKTFIIASNCHPQTIDI 271 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~--~~~~sl~~~~ta~~ea~~~a~~~~-----------~~~g~~Vlv~~~~h~s~~~~ 271 (985)
.+.+..+...++.+++++++|.+ .+++.++.|||.+...++.+.+.. .++++.|+++...|+++...
T Consensus 32 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~ 111 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA 111 (345)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHH
Confidence 34566677778889999999986 346778899997776666554321 01234788999999998887
Q ss_pred HHHhhcCCCeEEEEeCc--------hhhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecc
Q 001990 272 CITRADGFDIKVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDL 335 (985)
Q Consensus 272 ~~~~a~~~gi~v~~~~~--------~~l~~-l~~------~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~ 335 (985)
++. .|.+++.++. +++++ +++ ++++|++++| |.+|.+.|+++|+++||++|+++++|+ .
T Consensus 112 ~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~-a 186 (345)
T cd06450 112 AAY----LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA-A 186 (345)
T ss_pred HHH----HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec-h
Confidence 754 3666666543 45555 554 7888888887 579999999999999999999999943 2
Q ss_pred ccccCCC-CC------CcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccc
Q 001990 336 LALTILK-PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (985)
Q Consensus 336 ~alg~l~-~p------~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tr 407 (985)
++.+.+. .. ...++|+++.++ |+++.|+ ++|+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~g~~~~~------------------------------- 230 (345)
T cd06450 187 YGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-----GCSAVLVR------------------------------- 230 (345)
T ss_pred hhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-----chHHHHHH-------------------------------
Confidence 3433321 11 113799999888 7666553 34444322
Q ss_pred cccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecC----
Q 001990 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA---- 483 (985)
Q Consensus 408 e~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~---- 483 (985)
..++.++ +.+++.+|++++.++..++++++++.|+++++++++.++..+.+.|..+
T Consensus 231 ------------------~~~~~~~--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~ 290 (345)
T cd06450 231 ------------------ALKLWAT--LRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVK 290 (345)
T ss_pred ------------------HHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcch
Confidence 1122222 3667888999999999999999999999985588875444445555543
Q ss_pred -C--HHHHHHHHHHcCce-eeee---cCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 001990 484 -D--AHAIASAAYKIEMN-LRVV---DSNTVTASFDET-TTLEDVDKLFIVFAG 529 (985)
Q Consensus 484 -~--~~~l~~~L~~~Gi~-~~~~---~~~~lris~~~~-~t~edid~ll~~l~~ 529 (985)
+ ..++.++|.++|+. +... .++.+|++++.+ +|++|+|+|+++|..
T Consensus 291 ~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 2 57899999998654 4322 247899999987 599999999999864
No 164
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.76 E-value=2.5e-17 Score=187.68 Aligned_cols=299 Identities=8% Similarity=-0.018 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHhCCCc---cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-CCCCc-HHHHHhcCcEE
Q 001990 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTN-PATAAMCGMKI 704 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~---~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~-~Hg~~-~~~~~~~G~~v 704 (985)
+.++++++++.+++++|.+. +.+..++|+.+.++++..+. .+++++++..+ .+|.. ...++..|..
T Consensus 46 f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~--------~~g~~~l~i~~G~fg~r~~~~a~~~g~~- 116 (360)
T PRK05355 46 FEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL--------GGGKKADYVDTGSWSKKAIKEAKKYGEV- 116 (360)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCCc-
Confidence 45678899999999999742 33566777777777665432 24455554332 11111 2235667865
Q ss_pred EEEeCCC-CCCCCHHHHHH-HHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCc
Q 001990 705 VSVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (985)
Q Consensus 705 ~~v~~~~-~g~iDle~L~~-~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~ 781 (985)
..++.++ .|..+..++++ +++ +++++|.+++- +.+|+..+||++| +|++++||++|+.+...+ +..+
T Consensus 117 ~~~~~~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i-dv~~ 186 (360)
T PRK05355 117 NVAASSEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPI-DVSK 186 (360)
T ss_pred eEEecccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccC-CHHH
Confidence 6666554 56666666666 675 57888888874 6799996467766 899999999997665543 3334
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC---CCCCCCCCCCCcccccchhhhHHHHHHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~---~~~~~~~~t~~i~s~~~g~~~~~~~A~a 858 (985)
+ |++++++||+|+ .||+|++++++++.+.+.+.. +...+. .......+|+++.. +.+..+
T Consensus 187 ~--d~~~~ssqK~lg------P~Glg~l~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~Tp~~~~--------i~aL~~ 249 (360)
T PRK05355 187 F--GLIYAGAQKNIG------PAGLTIVIVREDLLGRALPSI-PSMLDYKTHADNDSMYNTPPTFA--------IYLAGL 249 (360)
T ss_pred c--cEEEEecccccc------CCceEEEEECHHHHhhcccCC-ChHHHHHHHHhcCCccCCCcHHH--------HHHHHH
Confidence 4 699999999883 468999999998776654321 110000 00111123444331 122234
Q ss_pred HHHHhchh-hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 859 YIAMMGSK-GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 859 ~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
+++.+.++ |+.++.++...+++++++.|++ ++...+..+.......+.|.++ .+....++.+.+.++|+++..
T Consensus 250 aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~-----~~~~~~~~~~~~~~~Gi~~~~ 324 (360)
T PRK05355 250 VFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLA-----DEELDKKFLAEAKAAGLVGLK 324 (360)
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcC-----ChHHHHHHHHHHHHCCCcccC
Confidence 45555566 7888889999999999999998 3211111111111112344443 122335666778889999743
Q ss_pred CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 937 MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 937 ~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
... ..+.+|+|+..++|+|||| +|+++|+++..
T Consensus 325 ~~~-~~g~vRiS~~~~nt~eei~---~l~~~l~~~~~ 357 (360)
T PRK05355 325 GHR-SVGGMRASIYNAMPLEGVQ---ALVDFMKEFER 357 (360)
T ss_pred CCC-ccCcEEEECCCCCCHHHHH---HHHHHHHHHHH
Confidence 221 2488999999999999999 99999999764
No 165
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.76 E-value=7.9e-17 Score=187.81 Aligned_cols=312 Identities=14% Similarity=0.142 Sum_probs=194.4
Q ss_pred ccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHH
Q 001990 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (985)
Q Consensus 166 ~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~ 245 (985)
..++|+|.+..|..+.+... .+ .+.+ + ++..+....|..+...++++.+|+++|.+. ..++.+|+.+.++++
T Consensus 52 ~sn~yl~l~~~p~v~~a~~~-~~-~~~~--~--~~~~s~~~~~~~~~~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i 123 (410)
T PRK13392 52 CSNDYLGMGQHPDVIGAMVD-AL-DRYG--A--GAGGTRNISGTSHPHVLLERELADLHGKES--ALLFTSGYVSNDAAL 123 (410)
T ss_pred ECCCccCCCCCHHHHHHHHH-HH-HHcC--C--CCchhhhcccChHHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHH
Confidence 34568888865443333332 22 2211 1 111222233445556789999999999754 567777876666655
Q ss_pred HHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhhhc-c----CCCEeEEEEEcC-CCCeeeccHH
Q 001990 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K----SGDVCGVLVQYP-GTEGEVLDYG 316 (985)
Q Consensus 246 ~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l~~-l----~~~t~~V~v~~p-n~~G~i~dl~ 316 (985)
.++.. ..+++.|+++...|.++...++ ..|.+++.++. +++++ + ++++++|++.+| |++|.+.|++
T Consensus 124 ~~l~~-~~~g~~vi~~~~~h~s~~~~~~----~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 124 STLGK-LLPGCVILSDALNHASMIEGIR----RSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred HHHhc-CCCCCEEEEehhhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 43321 1267888888889999887664 24666655532 33433 2 357899999998 6899999999
Q ss_pred HHHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCc
Q 001990 317 DFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (985)
Q Consensus 317 ~I~~~a~~~galliV~a~~~alg~l~~p~---------~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~ 386 (985)
+|.++|+++|++++|| +.+++|.+.+.+ ...+|+++++. |.|+.+ | |++..++++++.+.-.
T Consensus 199 ~i~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~------G-G~~~~~~~~~~~l~~~ 270 (410)
T PRK13392 199 AICDLADRYNALTYVD-EVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL------G-GYIAASADLIDFVRSF 270 (410)
T ss_pred HHHHHHHHcCCEEEEE-CCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc------c-chhhcCHHHHHHHHHh
Confidence 9999999999999994 344555432211 12468888887 888643 2 6887787776643100
Q ss_pred eeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCC
Q 001990 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (985)
Q Consensus 387 ~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~ 466 (985)
.+.|.+ +... ++....+..+++ ..+... .+..++..++.+++++.|+++|
T Consensus 271 ----------~~~~~~--------------s~~~-~~~~~~a~~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g- 320 (410)
T PRK13392 271 ----------APGFIF--------------TTAL-PPAVAAGATAAI--RHLKTS--QTERDAHQDRVAALKAKLNANG- 320 (410)
T ss_pred ----------Ccchhc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-
Confidence 000100 0010 011223333343 222222 2345677888999999999987
Q ss_pred EEEcCCCCcceEEEecCC---HHHHHHHHH-HcCceeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 467 VEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 467 ~~~~~~~~~~~~~i~~~~---~~~l~~~L~-~~Gi~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+++... ..+.+.+..+. ..++.++|. ++||.++... ...+|++++..+|++|+++++++|..
T Consensus 321 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 321 IPVMPS-PSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 776532 11223333332 568999886 6799886531 25899999999999999999999974
No 166
>PLN02822 serine palmitoyltransferase
Probab=99.76 E-value=1.9e-16 Score=186.91 Aligned_cols=300 Identities=13% Similarity=0.103 Sum_probs=193.3
Q ss_pred hcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v 707 (985)
-|..+.+.++++.+++++|.+...++. +|..++.++ ++.+. +++|.|++...+|.+....+.+.|.+++++
T Consensus 150 yg~~~~~~~Lee~La~~~~~~~~i~~s-~G~~a~~sa---i~a~~-----~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~ 220 (481)
T PLN02822 150 YGTIDVHLDCETKIAKFLGTPDSILYS-YGLSTIFSV---IPAFC-----KKGDIIVADEGVHWGIQNGLYLSRSTIVYF 220 (481)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEC-CHHHHHHHH---HHHhC-----CCCCEEEEeCCccHHHHHHHHHcCCeEEEE
Confidence 356677889999999999987654444 454444443 33331 467888888888877766778889999999
Q ss_pred eCCCCCCCCHHHHHHHHHhcC------CCe-EEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC
Q 001990 708 GTDAKGNINIEELRKAAEANR------DNL-STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (985)
Q Consensus 708 ~~~~~g~iDle~L~~~i~~~~------~~t-~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~ 779 (985)
+++ |.++++..+++.. +++ ++|+++.+ +.+|.+. |+++|+++|++||+++++|++|..+..| ..
T Consensus 221 ~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~-~L~~i~~l~~k~~~~LIvDEa~s~gvlG--~~ 292 (481)
T PLN02822 221 KHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIA-PLDEIVRLKEKYRFRVLLDESNSFGVLG--KS 292 (481)
T ss_pred CCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccC--CC
Confidence 885 6777777665321 234 67777666 4689998 8999999999999999999999644322 11
Q ss_pred C-----c-----CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 780 G-----Y-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 780 g-----~-----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
| . ..+|+++++++|+|+++ +|++++++++++.+.....+ .+ .+++. .
T Consensus 293 G~G~~e~~~v~~~~~dii~~s~sKalg~~-------GG~i~g~~~ii~~~~~~~~~------------~~--fsa~l--P 349 (481)
T PLN02822 293 GRGLSEHFGVPIEKIDIITAAMGHALATE-------GGFCTGSARVVDHQRLSSSG------------YV--FSASL--P 349 (481)
T ss_pred CCChHHHcCCCCCCCeEEEecchhhhhhC-------CeEEEcCHHHHHHHHhcCCc------------ee--ecccc--C
Confidence 1 1 24689999999998532 27888888776554311000 00 11100 1
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCC---HHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIE---PEDVA 924 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~---~~~l~ 924 (985)
+..+.++.++|..+.. ..+..++..+++++++++|++ ++.+..+ ...+. +.+.++........+ ..+++
T Consensus 350 p~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~spi---~~l~l~~~~~~~~~~~~~~~~~~ 423 (481)
T PLN02822 350 PYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGSN-TLSPI---VFLHLEKSTGSAKEDLSLLEHIA 423 (481)
T ss_pred HHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCCCE---EEEEeCCCcccccchHHHHHHHH
Confidence 1223334445554422 234566788899999999987 3443211 11222 223333100000001 35789
Q ss_pred HHHH-HCCCccCCCCCC------CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 925 KRLM-DYGFHGPTMSWP------VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 925 ~~L~-e~Gi~~~~~~~p------v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
++|. ++||.+....+| .+..+|++++..+|++||+ +++++|++++.++.
T Consensus 424 ~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~---~~~~~l~~~~~~~~ 479 (481)
T PLN02822 424 DRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDIL---KASESLKRVAASVL 479 (481)
T ss_pred HHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHH---HHHHHHHHHHHHHh
Confidence 9987 789987533222 2357999999999999999 99999999887653
No 167
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.75 E-value=1.1e-16 Score=182.93 Aligned_cols=285 Identities=13% Similarity=0.123 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~ 711 (985)
+...++++.+++++|.+. .+++++|+++.+++ ++.+. .++++|++++..|+.+...++..|.+++.++.
T Consensus 61 ~~~~~l~~~la~~~~~~~-~i~~~~G~~~~~~~---l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-- 129 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEA-ALLFSSGYLANVGV---ISALV-----GKGDLILSDALNHASLIDGCRLSGARVRRYRH-- 129 (360)
T ss_pred HHHHHHHHHHHHHhCCCC-EEEECchHHHHHHH---HHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEecC--
Confidence 456688999999998654 46667777655333 33321 36789999998887777777888999988874
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC-C-------CCc
Q 001990 712 KGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S-------PGY 781 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-~-------~g~ 781 (985)
+|+++|+++++++. +++++|++.++ |.+|.+. |+++|.++|+++|+++++|++|..+..+.. . ...
T Consensus 130 ---~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
T TIGR00858 130 ---NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKP 205 (360)
T ss_pred ---CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCc
Confidence 58999999997432 35777887777 4689887 899999999999999999999864322111 0 011
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~ 861 (985)
.+.|+++.|+||+|+. +| |+++.++++.+.+..... ...... .. ....++++.+++.
T Consensus 206 ~~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~~-----------~~~~~~-~~----~~~~~~a~~~al~ 262 (360)
T TIGR00858 206 EPVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINRAR-----------TLIFST-AL----PPAVAAAALAALE 262 (360)
T ss_pred cCCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHhCc-----------cceecC-CC----CHHHHHHHHHHHH
Confidence 3578999999999853 33 788887766544321000 000000 01 1111222233343
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCC-
Q 001990 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW- 939 (985)
Q Consensus 862 ~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~- 939 (985)
.+.. ..+..++..++.+++.+.|++ ++.+. .+.+. .+.+.++ .+.+..++.+.|.++||.+.....
T Consensus 263 ~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~---~~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~~~ 330 (360)
T TIGR00858 263 LIQE--EPWRREKLLALIARLRAGLEALGFTLM--PSCTP---IVPVIIG-----DNASALALAEELQQQGIFVGAIRPP 330 (360)
T ss_pred HHhh--CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCC---EEEEEeC-----CHHHHHHHHHHHHHCCeeEeeeCCC
Confidence 3221 234456777888999999987 33332 11122 2334443 123467899999999999853221
Q ss_pred --C-CCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 940 --P-VPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 940 --p-v~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
+ .++.+|++++.++|++|++ +++++|+
T Consensus 331 ~~~~~~~~iRis~~~~~~~~~i~---~~l~~l~ 360 (360)
T TIGR00858 331 TVPAGTSRLRLTLSAAHTPGDID---RLAEALK 360 (360)
T ss_pred CCCCCCceEEEEEcCCCCHHHHH---HHHHhhC
Confidence 1 1358999999999999999 9998763
No 168
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.75 E-value=2.3e-16 Score=183.00 Aligned_cols=328 Identities=17% Similarity=0.205 Sum_probs=216.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCCccc----eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHH
Q 001990 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK----SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLL 214 (985)
Q Consensus 139 ~~lp~~~~~~se~e~~~~~~~~~~~n~~~~----~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~ 214 (985)
-.+| +.++++.+++.++..+..++..+. .+...+.-+..+|+...+.+.. +..-+...+..+.++.....
T Consensus 31 ~~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~----~~~~nl~d~~~~p~a~~~E~ 104 (460)
T COG0076 31 RMAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVS----ALNKNLGDPDESPAAAELEE 104 (460)
T ss_pred ccCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHH----HHhhcCCCcccChhHHHHHH
Confidence 3566 578899999999999977775432 1223333344566666533332 22225556667778889899
Q ss_pred HHHHHHHHhhCC-CCcceeeccchHHHHHHHHHHhhhhc-----C------CCCEEEEcCCCChhHHHHHHHhhcCCCeE
Q 001990 215 NFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNIQK-----G------KKKTFIIASNCHPQTIDICITRADGFDIK 282 (985)
Q Consensus 215 e~q~~ia~L~g~-~~~~~sl~~~~ta~~ea~~~a~~~~~-----~------~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~ 282 (985)
+.-.|+++|+|. +....+++.|||.+..-.+++.+... + +..+||+|...|.|+.+.+.. +|++
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~----lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY----LGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHH----hCCC
Confidence 999999999999 45567788899866664444443211 0 122799999999999999764 3444
Q ss_pred EEEe---------Cchhhhc-cCCCEeE--EEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccc--cCCCCCCcc
Q 001990 283 VVVS---------DLKDIDY-KSGDVCG--VLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLAL--TILKPPGEL 347 (985)
Q Consensus 283 v~~~---------~~~~l~~-l~~~t~~--V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~al--g~l~~p~~~ 347 (985)
.+.+ |+++|++ +++++.. |+.+.+ +.+|.++||++|+++|+++|++++|++-.-.. ......+.|
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchh
Confidence 4433 2356776 7777776 887877 46999999999999999999999996522111 112223343
Q ss_pred -----cceEEEecC-ccccccCCCCCCceEEEEEchh--hHhcCC--CceeeeeecCCCCcceEEecccccccccccccC
Q 001990 348 -----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (985)
Q Consensus 348 -----GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~--~~~~lp--~~~vG~s~d~~g~~~~~l~l~tre~~~rre~at 417 (985)
+||-++.++ |.+..|. ++|++.+|++ +.+.+- ..+.+.+ +.+.|.+.. +|
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~-----~~G~il~rd~e~l~~~~~~~~~yl~~~----~~~~~ti~~-sr---------- 320 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPI-----GCGVVLFRDEEALRRILIFADYYLPGG----GIPNFTILG-SR---------- 320 (460)
T ss_pred hcCCCCceEEEECcccccCCCC-----CceEEEEECHHHhhhhhhcccccCCCC----CcCceeEee-cc----------
Confidence 799999999 5556675 4566777654 433321 1111100 112222221 11
Q ss_pred CCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC----HHHHHHHHH
Q 001990 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY 493 (985)
Q Consensus 418 sni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~----~~~l~~~L~ 493 (985)
.- ....+.-+. +..+|.+|++++.+++.+++++|+++|++.|.++++.+|..+.|+|+.++ ..+..+++.
T Consensus 321 -~~---~~~~~~~~~--l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~ 394 (460)
T COG0076 321 -PG---RQALALYAN--LRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLD 394 (460)
T ss_pred -ch---HHHHHHHHH--HHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHH
Confidence 00 111122222 58999999999999999999999999999976999988888889998754 456667777
Q ss_pred HcCceeeee
Q 001990 494 KIEMNLRVV 502 (985)
Q Consensus 494 ~~Gi~~~~~ 502 (985)
+.|+.+...
T Consensus 395 ~~gw~v~~~ 403 (460)
T COG0076 395 RRGWQVPAQ 403 (460)
T ss_pred hcCceeecc
Confidence 789987643
No 169
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.75 E-value=2.8e-16 Score=181.37 Aligned_cols=297 Identities=14% Similarity=0.200 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHhCCCccce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-
Q 001990 634 FNNLGEWLCTITGFDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~- 711 (985)
..++++++++++|++...+ +.++++++.. ++++.+. .++++|+++++.|..+...++..|.+++.++.+.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al~---~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 139 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESLY---LVMRAFL-----SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSE 139 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHHhCceEEeeccccc
Confidence 4568899999999877554 4455555443 3333221 3568899998877766667788999999998742
Q ss_pred --CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccccCCCCCC--cCCC
Q 001990 712 --KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--YIGA 784 (985)
Q Consensus 712 --~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g--~~g~ 784 (985)
++.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..-..+..... ....
T Consensus 140 ~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 216 (380)
T PRK06225 140 ECNYKLTPELVKENMD---ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEH 216 (380)
T ss_pred cCCccCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCC
Confidence 35799999999987 78899999998 5789874 2599999999999999999998631001110001 1123
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
.+++.+++|+|+. .|.++|++++++++.+.+..... ...+.+ .....++.+.+...
T Consensus 217 ~i~~~s~SK~~g~----~G~RiG~i~~~~~l~~~~~~~~~---------------~~~~~~----~~~~~~a~~~l~~~- 272 (380)
T PRK06225 217 TVTSYSFSKIFGM----AGLRIGAVVATPDLIEVVKSIVI---------------NDLGTN----VIAQEAAIAGLKVK- 272 (380)
T ss_pred EEEEeechhhcCC----ccceeEEEecCHHHHHHHHHHHh---------------cccCCC----HHHHHHHHHHHhcc-
Confidence 4667788898843 36678999998877655432100 001111 11111222233221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCC--C
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW--P 940 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~--p 940 (985)
.+-+.+..+....+.+++.+.|++ +..+...++.+ +.+.+++.. .+.+..++.+.|.++||.+....+ +
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g---~~~~~~~~~----~~~~~~~l~~~l~~~gi~v~~g~~~~~ 345 (380)
T PRK06225 273 DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHG---NMMVIDISE----AGIDPEDLVEYLLERKIFVRQGTYTSK 345 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCC---eEEEEEccc----ccCCHHHHHHHHHHCCEEEcCCcccCc
Confidence 111223333334556677777775 22221111112 223455431 245788999999999998743221 1
Q ss_pred --CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 941 --VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 941 --v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
-++.+|+++. .++||++ ++++.|+++++++++
T Consensus 346 ~~~~~~iR~s~~--~~~e~l~---~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 346 RFGDRYIRVSFS--IPREQVE---VFCEEFPDVVETLRT 379 (380)
T ss_pred CCCCceEEEEeC--CCHHHHH---HHHHHHHHHHHHhhc
Confidence 1368999986 4789999 999999999887653
No 170
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.75 E-value=8.4e-17 Score=187.28 Aligned_cols=313 Identities=13% Similarity=0.131 Sum_probs=197.1
Q ss_pred CccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHH
Q 001990 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (985)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~ 244 (985)
...++|+|...+|..+.+... ++ .+. .+. +..+....|..+...++++.+|+++|.+. +.++++|+.+.+++
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~-~~-~~~--~~~--~~~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~SG~~An~~a 121 (406)
T PRK13393 50 WCSNDYLGMGQHPAVLAAMHE-AL-DTC--GAG--AGGTRNISGTNHYHVLLEAELADLHGKEA--ALLFTSGYVSNWAA 121 (406)
T ss_pred eecccccCCCCCHHHHHHHHH-HH-HHc--CCC--CcccccccCChHHHHHHHHHHHHHhCCCc--EEEeCCcHHHHHHH
Confidence 345678888876554444442 32 222 121 11222223455667889999999999764 66778888777776
Q ss_pred HHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe---Cchhhhc-c----CCCEeEEEEEcC-CCCeeeccH
Q 001990 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-K----SGDVCGVLVQYP-GTEGEVLDY 315 (985)
Q Consensus 245 ~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~---~~~~l~~-l----~~~t~~V~v~~p-n~~G~i~dl 315 (985)
+.++.. ..+++.|++++..|+++...++. .|.+++.+ |++++++ + ++++++|++.++ |++|.+.|+
T Consensus 122 i~~l~~-~~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l 196 (406)
T PRK13393 122 LSTLGS-RLPGCVILSDELNHASMIEGIRH----SRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPI 196 (406)
T ss_pred HHHhhc-CCCCCEEEEccchhHHHHHHHHH----cCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCH
Confidence 653321 11567888888999999998853 35555544 4455554 3 246788888887 689999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCC
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l~~p~---------~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~ 385 (985)
++|.++|+++|++++|| +.++.|++.+.+ ....||++++. |.|+.+ | |++..++++.+.+..
T Consensus 197 ~~i~~l~~~~~~~livD-ea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~---G----G~~~~~~~~~~~l~~ 268 (406)
T PRK13393 197 AEICDVAEKHGAMTYLD-EVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM---G----GYITGSAALCDFIRS 268 (406)
T ss_pred HHHHHHHHHcCCEEEEE-CCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc---C----ceeeCCHHHHHHHHH
Confidence 99999999999999994 344555433221 12268888886 988642 2 678777776655410
Q ss_pred ceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCC
Q 001990 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (985)
Q Consensus 386 ~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g 465 (985)
..+.|.+ ++...+....+..+++ ..+...+. ..++..++.+++++.|+++|
T Consensus 269 ----------~~~~~~~---------------t~~~~p~~~aa~~aaL--~~~~~~~~--~~~~~~~~~~~l~~~L~~~g 319 (406)
T PRK13393 269 ----------FASGFIF---------------TTSLPPAVAAGALASV--RHLKASSA--ERERHQDRVARLRARLDKAG 319 (406)
T ss_pred ----------hCcCcee---------------cCccCHHHHHHHHHHH--HHHhhCHH--HHHHHHHHHHHHHHHHHHcC
Confidence 0000110 0000112233333443 33322332 23566788999999999886
Q ss_pred CEEEcCCCCcceEEEecCC---HHHHHHHHHH-cCceeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 466 TVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 466 ~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~-~Gi~~~~~-----~--~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
++++.. ....+.+..++ +.++.++|.+ +||.++.. + .+.+|++++.++|++|+|+++++|..
T Consensus 320 -~~~~~~-~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 320 -IPHLPN-PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred -CCcCCC-CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 766532 11223333332 6789999987 59988643 1 26799999999999999999999974
No 171
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=1.6e-16 Score=185.55 Aligned_cols=302 Identities=14% Similarity=0.145 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHhC--CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC---------
Q 001990 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------- 701 (985)
Q Consensus 634 ~~el~~~la~l~G--~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------- 701 (985)
..++.+.|++++. .+. .++.+||+++++++++.+|.|...+|.+++.+||. ...+||.........+
T Consensus 87 ~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 165 (423)
T PRK05964 87 AERLAQRLVALTPGGLDH-VFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYT 165 (423)
T ss_pred HHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccccc
Confidence 4467888888874 333 46789999999999999998866565445667775 6688987655433211
Q ss_pred ---cEEEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEc-CC-Cccccc---cCHHHHHHHHHHcCCEEEEEccccc
Q 001990 702 ---MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTY-PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMN 771 (985)
Q Consensus 702 ---~~v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~-pn-~~G~i~---~di~eI~~la~~~g~lliVD~a~~~ 771 (985)
..+..+++..+ ...+++++++.++++.+++++|+++. .. ..|... ..+++|.++|++||+++++|++|.
T Consensus 166 ~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t- 244 (423)
T PRK05964 166 PLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT- 244 (423)
T ss_pred CcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-
Confidence 11233443211 11238899999976657888888764 22 356554 139999999999999999999883
Q ss_pred cccCCCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcc
Q 001990 772 AQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (985)
Q Consensus 772 ~~~g~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~ 843 (985)
++ .+.|. ..+|++++ .|+|+ +|+-.+|++++++++.+.+.... .. . . ....
T Consensus 245 g~---gr~G~~~a~~~~~v~pDi~~~--~K~l~----gG~~p~~av~~~~~i~~~~~~~~-~~-~---------~-~~~~ 303 (423)
T PRK05964 245 GF---GRTGTLFACEQAGVSPDIMCL--SKGLT----GGYLPLAATLCTAEIFEAFYSDD-RA-K---------A-FMHS 303 (423)
T ss_pred CC---CcCcchhHHHhcCCCCCeeee--ehhhh----cCcccceEEEEcHHHHHhhhcCC-cc-c---------c-cccC
Confidence 22 22221 23788765 48883 33334777888888776553110 00 0 0 0001
Q ss_pred cccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEecCccccCCCC
Q 001990 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE 919 (985)
Q Consensus 844 s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~ 919 (985)
+++.|++..++++.+.+..+..+++ .++..++.+++++.|++. +..+ ..+. + . .+.+.+..- ..+..
T Consensus 304 ~T~~~np~~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~-G-l--~~~i~l~~~--~~~~~ 374 (423)
T PRK05964 304 PSYTANPLACAAANASLDLFEDEPV---LERVAALSAGLAEGLEPFRDLPGVADVRVL-G-A--IGAVELDRP--VLERD 374 (423)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhhccCCCeEEeecc-c-E--EEEEEeccC--cchhH
Confidence 1223455666667777777755543 356667788888888752 2221 1111 1 1 122333210 00012
Q ss_pred HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 920 PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 920 ~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
...+.+.|.++|+.+... .+.||++|+..+|++||| +++++|+++++|
T Consensus 375 ~~~l~~~l~~~Gv~v~~~----~~~lR~~p~l~~t~edId---~~v~~l~~al~~ 422 (423)
T PRK05964 375 GPALRAFALERGVLLRPL----GNTIYLMPPYIITAEELD---RITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHHHHH---HHHHHHHHHHhh
Confidence 567889999999997532 368999999999999999 999999998875
No 172
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.75 E-value=1.2e-16 Score=191.15 Aligned_cols=309 Identities=11% Similarity=0.053 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH-HHhcCcEEEEEeCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDA 711 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~-~~~~G~~v~~v~~~~ 711 (985)
.+.+.++..|++||.+.+.|.+|++|+|+.++++++. .++|+||+++++|.+.... +.+.|++++++++..
T Consensus 175 ~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--------~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~ 246 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--------TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR 246 (720)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc
Confidence 4789999999999999998999999999988777654 4789999999999998775 889999999998754
Q ss_pred C-----CCCCHHH-----HHHHHHhcCCC-------eEEEEEEcCCCccccccCHHHHHHH-HHHcCCEEEEEccccccc
Q 001990 712 K-----GNINIEE-----LRKAAEANRDN-------LSTLMVTYPSTHGVYEEGIDEICKI-IHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 712 ~-----g~iDle~-----L~~~i~~~~~~-------t~~Vvi~~pn~~G~i~~di~eI~~l-a~~~g~lliVD~a~~~~~ 773 (985)
+ |.++.+. ++++|+++.++ .+++++++|+++|++. |+++|+++ +|.++ +++||+||. ++
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~y-di~~I~~~~~h~~~-~llvDEAhg-ah 323 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIY-NARQVVDKIGHLCD-YILFDSAWV-GY 323 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceee-cHHHHHHHhhccCC-cEEEeCcch-hh
Confidence 3 4567555 99999876322 6899999999999998 99999998 68888 999999984 23
Q ss_pred cCCCC--------CCcCCCc----EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCC--CCCCCC
Q 001990 774 VGLTS--------PGYIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP--EKSQPL 839 (985)
Q Consensus 774 ~g~~~--------~g~~g~D----i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~--~~~~~t 839 (985)
..|.. ..+.|+| +++.|.||+++.- -..++|-++...++.- .+.+.. +..+. ..-.+|
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~al-----TQaS~LHvk~~~i~g~-~~~v~~--~r~~~al~m~qST 395 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGF-----SQTSQIHKKDNHIKGQ-ARYCPH--KRLNNAFMLHAST 395 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhh-----hhHhhhhcCCcccccc-cccCCH--HHHHHHHHHHcCC
Confidence 22211 1357899 9999999999532 1345565554322100 000000 00000 000112
Q ss_pred CCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-hc--cCCeeEc---------------------
Q 001990 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL-EK--HYPILFR--------------------- 895 (985)
Q Consensus 840 ~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L-~~--~~~i~~~--------------------- 895 (985)
|+ .|.....+..|...+.. ..| ++..+..++.+..+++.| +. ++.+..+
T Consensus 396 SP----sY~LmASLDva~~~m~~--~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~ 468 (720)
T PRK13578 396 SP----FYPLFAALDVNAKMHEG--ESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLR 468 (720)
T ss_pred Ch----HHHHHHHHHHHHHHHHH--hhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccc
Confidence 21 11121222223333332 123 234455666677777777 32 2332200
Q ss_pred ------CCC--------------CceeEEEEEEecCcc------ccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEec
Q 001990 896 ------GVN--------------GTVAHEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (985)
Q Consensus 896 ------g~~--------------~~~~~~~vv~~~~~~------~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~ 949 (985)
+.. ++. -+++.++++. ...|+++..+.+.|+++||.+.... ...+.+-+
T Consensus 469 ~w~~~p~~~whgf~~~~~~~~~lDP~--KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---~~~vL~l~ 543 (720)
T PRK13578 469 FFSFEPGEKWHGFEGYAEDQYFVDPC--KLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---LNSILFLL 543 (720)
T ss_pred ccccccCccccccccccccccccCCc--eEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---CCeEEEEe
Confidence 000 111 1223322221 1224558999999988899875433 36788888
Q ss_pred cCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 950 TESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 950 t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+..+|+++++ +++++|.++.+..
T Consensus 544 s~g~t~~~~~---~Lv~aL~~f~~~~ 566 (720)
T PRK13578 544 TPAEDMAKLQ---QLVAMLARFEKHI 566 (720)
T ss_pred CCCCCHHHHH---HHHHHHHHHHHhh
Confidence 8999999999 9999999875543
No 173
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.75 E-value=2.4e-16 Score=179.58 Aligned_cols=276 Identities=17% Similarity=0.189 Sum_probs=187.5
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe
Q 001990 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~ 286 (985)
.|......++++.+++++|++. ..++.+||+++.+++.++. . +||+|++++..|+++...++ ..|++++.+
T Consensus 42 ~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~-~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~ 112 (349)
T cd06454 42 SGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLA-G--KGDLIISDSLNHASIIDGIR----LSGAKKRIF 112 (349)
T ss_pred cCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhc-C--CCCEEEEehhhhHHHHHHHH----HcCCceEEe
Confidence 3555666778899999999874 4566777877776655542 3 78999999999999887764 357777765
Q ss_pred ---Cchhhhc-cC-----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC---------CCCcc
Q 001990 287 ---DLKDIDY-KS-----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---------PPGEL 347 (985)
Q Consensus 287 ---~~~~l~~-l~-----~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~---------~p~~~ 347 (985)
+.+++++ +. +++++|++.++ |.+|.+.|+++|+++||++|+++++|. ..+.|.+. .....
T Consensus 113 ~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~-a~~~g~~~~~~~~~~~~~~~~~ 191 (349)
T cd06454 113 KHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDE-AHSVGVYGPHGRGVEEFGGLTD 191 (349)
T ss_pred cCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEc-cccccccCCCCCChhhhccccc
Confidence 3455655 32 35677777777 689999999999999999999999942 33444321 12457
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001990 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (985)
Q Consensus 348 GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l 426 (985)
++|++++|. |.|+. |+ |+++.++++.+.+.... ..|.+ .++.+ ....
T Consensus 192 ~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~----------~~~~~------------~~~~~---~~~~ 239 (349)
T cd06454 192 DVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYA----------RGFIF------------STSLP---PAVA 239 (349)
T ss_pred cCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhc----------hhhhc------------cCCCC---HHHH
Confidence 899999998 87753 22 67877877665541100 00100 01111 1233
Q ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecC--C-HHHHHHHHHHcCceeeee-
Q 001990 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVV- 502 (985)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~--~-~~~l~~~L~~~Gi~~~~~- 502 (985)
.++.+++ ..+.. .+++.++..++.+++.+.|+++| +++...+....+.+..+ . +.++.+.|.++||.+...
T Consensus 240 ~a~~~~l--~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~ 314 (349)
T cd06454 240 AAALAAL--EVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIR 314 (349)
T ss_pred HHHHHHH--HHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEec
Confidence 3444443 33322 46678889999999999999887 77654322112233233 2 788999999999987542
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 ------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 ------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..+.+|++++.+++++|+++++++|..
T Consensus 315 ~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 315 YPTVPRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred CCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999964
No 174
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.75 E-value=1.1e-16 Score=186.40 Aligned_cols=312 Identities=14% Similarity=0.168 Sum_probs=195.6
Q ss_pred CccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHH
Q 001990 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (985)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~ 244 (985)
...++|+|.+..|..+.+... . +.+.++ ++..+....|..+...++++.+|+++|.+. +.++.+|+.+.+++
T Consensus 51 ~~s~dylgl~~~p~v~~a~~~-~-~~~~~~----~~~~s~~~~g~~~~~~~l~~~la~~~g~~~--~~~~~sG~~an~~a 122 (407)
T PRK09064 51 WCSNDYLGMGQHPKVIEAMIE-A-LDRCGA----GAGGTRNISGTNHYHVELERELADLHGKEA--ALVFTSGYVSNDAT 122 (407)
T ss_pred EECCCCcCCCCCHHHHHHHHH-H-HHHcCC----CCCCcCcCccCHHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHH
Confidence 345678888865433333321 2 222221 111222233455677889999999999654 55677887666655
Q ss_pred HHHh-hhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe---Cchhhhc-cC----CCEeEEEEEcC-CCCeeecc
Q 001990 245 AMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----GDVCGVLVQYP-GTEGEVLD 314 (985)
Q Consensus 245 ~~a~-~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~---~~~~l~~-l~----~~t~~V~v~~p-n~~G~i~d 314 (985)
+..+ ++. +++.|+.+...|.+....++. .++++..+ |++++++ +. +++++|++.++ |++|.+.|
T Consensus 123 i~~l~~~~--~~~~i~~~~~~h~s~~~~~~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~ 196 (407)
T PRK09064 123 LSTLAKLI--PDCVIFSDELNHASMIEGIRR----SRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP 196 (407)
T ss_pred HHHHhCCC--CCCEEEEeCcchHHHHHHHHH----cCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC
Confidence 4432 222 566666777889999888754 34444443 3456665 32 56889999887 68999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCC
Q 001990 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (985)
Q Consensus 315 l~~I~~~a~~~galliV~a~~~alg~l~~p~---------~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp 384 (985)
+++|.++|+++|++++|| +.+++|.+.+.+ ....||++++. |.||.+ | ||+++++++++.+.
T Consensus 197 l~~i~~l~~~~~~~livD-Ea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~~~~~~~~~~~l~ 268 (407)
T PRK09064 197 IAEICDLADKYNALTYLD-EVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM---G----GYIAGSAALVDAVR 268 (407)
T ss_pred HHHHHHHHHHcCCEEEEE-CCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc---C----ceEecCHHHHHHHH
Confidence 999999999999999994 445545432211 12468998887 988632 2 68888887766541
Q ss_pred CceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC
Q 001990 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (985)
Q Consensus 385 ~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 464 (985)
.. .+.|.+ |... ++....+..+++ .++... ....++..++.+++++.|+++
T Consensus 269 ~~----------~~~~~~--------------t~~~-~~~~~~aa~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 269 SY----------APGFIF--------------TTSL-PPAIAAAALASI--RHLKES--NEERERHQERAAKLKAALDAA 319 (407)
T ss_pred Hh----------Cccccc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 00 000111 0000 111222233333 344333 344677889999999999998
Q ss_pred CCEEEcCCCCcceEEEecCC---HHHHHHHHHH-cCceeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 465 g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~-~Gi~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
| +++++.. ...+.+..+. +.++.++|.+ +||.++... .+.+|++++.++|++|+++++++|..
T Consensus 320 g-~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 320 G-IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred C-CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7 8766421 1223344332 6789999875 599886531 25799999999999999999999974
No 175
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.75 E-value=2.7e-16 Score=182.84 Aligned_cols=286 Identities=19% Similarity=0.262 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|++++..+ ...++.+||+++++++++.+|.|...+ ++.+||. ...+||....+....|-
T Consensus 119 ~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~---gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p 195 (442)
T TIGR03372 119 RALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPR---GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMP 195 (442)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhc---CCcEEEEECCCccCCCHHHhhccCCcccCCCCCC
Confidence 457888899887543 235778999999999999998874322 3456665 66799988666543221
Q ss_pred ---EEEEEeCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcC-CCccccccC----HHHHHHHHHHcCCEEEEEccccc
Q 001990 703 ---KIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMN 771 (985)
Q Consensus 703 ---~v~~v~~~~~g~iDle~L~~~i~~---~~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~g~lliVD~a~~~ 771 (985)
.+..+|. .|++++++.+++ +.+++++|+++.. +..|++. + ++++.++|++||+++|+|++|.
T Consensus 196 ~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~-p~~~yl~~l~~lc~~~g~llI~DEV~t- 268 (442)
T TIGR03372 196 LLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVIL-PPEGYLPAVRALCDEFGALLILDEVQT- 268 (442)
T ss_pred CCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCccc-CCHHHHHHHHHHHHHcCCEEEEeeccc-
Confidence 1233444 278888888753 3467888888643 4567776 4 9999999999999999999873
Q ss_pred cccCCCCCCcC--------CCcEEEeCCcccccccCCCC-CCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCc
Q 001990 772 AQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (985)
Q Consensus 772 ~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~G-GPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i 842 (985)
|+.+.|.+ -+|++++ .|.+ ++| -| +|.+++++++.+.+....+ ..
T Consensus 269 ---G~GRtG~~~a~e~~gv~PDivt~--gK~l----g~G~~P-igavv~~~~i~~~~~~~~~----------------~~ 322 (442)
T TIGR03372 269 ---GMGRTGKMFACEHEGVQPDILCL--AKAL----GGGVMP-IGATIATEAVFSVLFDNPF----------------LH 322 (442)
T ss_pred ---CCCccccchhhhhcCCCCCeeee--hhhh----cCCccc-ceEEEecHHHHHhhhccCc----------------cc
Confidence 33344432 2688864 3666 433 25 4556677776655421100 01
Q ss_pred ccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--EcCCCCceeEEEEEEecCccccC
Q 001990 843 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTA 916 (985)
Q Consensus 843 ~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~-i~--~~g~~~~~~~~~vv~~~~~~~~~ 916 (985)
.+++.|++..++++.+.|+.+.++++. ++..+..++|+++|++. ++ .+ ..|. + .+ +-+.+..
T Consensus 323 ~~T~~gnp~~~Aaa~a~L~~i~~~~l~---~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~-G-l~--~giel~~----- 390 (442)
T TIGR03372 323 TTTFGGNPLACAAALATINELLEKNLP---AQAAIKGDFLLDGFQQLAAEYPDLIIEARGK-G-LL--MAIEFRD----- 390 (442)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHHhCCCceEEEecc-e-EE--EEEEeCC-----
Confidence 123445777778888888888766544 35566778888888752 22 21 1221 1 11 2233321
Q ss_pred CCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 917 GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 917 g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
......+.+.|.++|+++....++ .+.+|++|+..+|++|+| +++++|.+.
T Consensus 391 ~~~~~~i~~~l~~~Gvl~~~~~~~-~~~lr~~Ppl~~t~~~id---~~~~~l~~~ 441 (442)
T TIGR03372 391 NEIGYAFAKELFQQNILVAGTLNN-AKSIRIEPPLTITIEQCA---LVIKAAKDA 441 (442)
T ss_pred hHHHHHHHHHHHHCCcEEeecCCC-CCEEEEECCcccCHHHHH---HHHHHHHHh
Confidence 123467899999999998543221 478999999999999999 999999875
No 176
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.74 E-value=3.7e-16 Score=181.76 Aligned_cols=284 Identities=13% Similarity=0.104 Sum_probs=178.3
Q ss_pred hHhhHHHHHHHHHHH----HHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhH-HHHHHHh-h-
Q 001990 204 EIAQGRLESLLNFQT----MIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT-IDICITR-A- 276 (985)
Q Consensus 204 e~sqg~l~~i~e~q~----~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~-~~~~~~~-a- 276 (985)
+...| .+.+.++++ .+++++|.+.+.+ .+.+||++..+++.++ .. +||+|++++..|.+. ...++.. .
T Consensus 64 r~~~G-~~~~~~lE~~~~~~la~l~g~~~alv-~~~SG~~A~~~~l~al-~~--~GD~Vl~~~~~~~~~~~~g~~~~~~~ 138 (416)
T PRK13034 64 RYYGG-CEFVDEVEALAIERAKQLFGCDYANV-QPHSGSQANGAVYLAL-LK--PGDTILGMSLSHGGHLTHGAKVSLSG 138 (416)
T ss_pred cccCC-ChHHHHHHHHHHHHHHHHhCCCceEE-ecCCcHHHHHHHHHHh-cC--CCCEEEEcCccceeeeecCCcceecc
Confidence 34445 366777777 9999999986222 3578999999888776 33 899999999999773 2222100 0
Q ss_pred -----cCCCeEE--EEeCchhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC---
Q 001990 277 -----DGFDIKV--VVSDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP--- 344 (985)
Q Consensus 277 -----~~~gi~v--~~~~~~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p--- 344 (985)
..++++. ..+|++++++ +. .++++|++.++ .+|...|+++|.++||++|++++|| +.+++|.....
T Consensus 139 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~-~~g~~~dl~~l~~la~~~g~~livD-~Aha~G~~~~g~~~ 216 (416)
T PRK13034 139 KWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS-AYPRELDFARFREIADEVGALLMVD-MAHIAGLVAAGEHP 216 (416)
T ss_pred ceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC-ccccccCHHHHHHHHHHcCCEEEEe-CcccccCcccCCCC
Confidence 0111111 1145677776 53 35777776554 4688889999999999999999994 34455544221
Q ss_pred Cc-ccceEEEecC-ccccccCCCCCCceEEEEEchh-hHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCcc
Q 001990 345 GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 421 (985)
Q Consensus 345 ~~-~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~-~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~ 421 (985)
+. .++|++++++ |+|++| ..|+++++++ +..++... +. . .++ ++++
T Consensus 217 ~~~~~~Di~~~s~~K~l~g~------~GG~v~~~~~~~~~~~~~~-~~-----------~-~~~----------~~~~-- 265 (416)
T PRK13034 217 NPFPHAHVVTTTTHKTLRGP------RGGMILTNDEEIAKKINSA-VF-----------P-GLQ----------GGPL-- 265 (416)
T ss_pred CCCCCceEEEEeCcccCCCC------CCeEEEECcHHHHHHHHhh-cC-----------C-ccc----------CCcc--
Confidence 11 3599999998 877544 2366666543 33322100 00 0 000 0011
Q ss_pred chhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcce--EEEecCC--HHHHHHHHHHcC
Q 001990 422 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDT--VKVKCAD--AHAIASAAYKIE 496 (985)
Q Consensus 422 t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~--~~i~~~~--~~~l~~~L~~~G 496 (985)
+....+...++ ...+ .++..+..++.++++++|++.|++.| +++... ...+. +.+..++ ...+.++|.++|
T Consensus 266 -~~~~aa~~~al-~~~~-~~~~~~~~~~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~G 341 (416)
T PRK13034 266 -MHVIAAKAVAF-GEAL-QPEFKTYAKQVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAG 341 (416)
T ss_pred -HHHHHHHHHHH-HHHh-ChhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCC
Confidence 11222222122 1222 23445678999999999999999987 888642 22233 4444434 567778999999
Q ss_pred ceeeee----------cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001990 497 MNLRVV----------DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (985)
Q Consensus 497 i~~~~~----------~~~~lris~~~----~~t~edid~ll~~l~~ 529 (985)
|++... .+..+|+++++ .++++|+++++++|..
T Consensus 342 I~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 342 ITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred cEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 988641 24679999999 6669999999999974
No 177
>PRK15029 arginine decarboxylase; Provisional
Probab=99.74 E-value=1.2e-16 Score=193.22 Aligned_cols=279 Identities=12% Similarity=0.056 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..|.|+|+..|+++|++.+++ +++|+|++..+++++.. . +||+|||++++|.|+...+.. .|++.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~t~F-lvNGST~gn~a~i~a~~-~--~gd~Vlv~RN~HKSv~~al~L----~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWS-VVVGTSGSNRTIMQACM-T--DNDVVVVDRNCHKSIEQGLIL----TGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 457889999999999998766 78899999999888753 3 899999999999999998743 5788887743
Q ss_pred ----------------hhhhc-c--CCCEe--------EEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE----ecccc
Q 001990 289 ----------------KDIDY-K--SGDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLA 337 (985)
Q Consensus 289 ----------------~~l~~-l--~~~t~--------~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~----a~~~a 337 (985)
+.+++ + .++++ +|++|+|||+|.+.|+++|+++||++|++++|+ +++..
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 23433 2 34445 899999999999999999999999999999993 33211
Q ss_pred ccCCC--CCC-----c-ccce-EEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccc
Q 001990 338 LTILK--PPG-----E-LGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (985)
Q Consensus 338 lg~l~--~p~-----~-~GaD-i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tr 407 (985)
...++ .+- . .||| +++.|. |.|+. ++ ++++++++.. .+.+ |.
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lT----QaS~LHv~~~-~~~i---------d~------------- 408 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LS----QASYIHVREG-RGAI---------NF------------- 408 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccc-hh----hhhhheeCCC-cccc---------CH-------------
Confidence 12222 122 3 7999 899999 76753 22 3567777543 0011 00
Q ss_pred cccccccccCCCccchhHHHHHHHHHHH--HHcCc-chHHHHHHHHHHHHHHHHHHHhcCCC------------------
Q 001990 408 EQHIRRDKATSNICTAQALLANMAAMYA--VYHGP-EGLKTIAQRVHGLAGTFALGLKKLGT------------------ 466 (985)
Q Consensus 408 e~~~rre~atsni~t~~~l~a~~aa~y~--~~~g~-~Gl~~i~~~~~~~a~~l~~~L~~~g~------------------ 466 (985)
.|...+-.-..|+++.|.++|++-. .++.. .| +++.++..+.+..++++|.++.+
T Consensus 409 ---~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v 484 (755)
T PRK15029 409 ---SRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVV 484 (755)
T ss_pred ---HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCcccc
Confidence 0011111223356889999999832 22222 34 45667778888899999977643
Q ss_pred ------------------------EEEcCC--C------------Ccce--EEEecCC----HH---------HHHHHHH
Q 001990 467 ------------------------VEVQGL--P------------FFDT--VKVKCAD----AH---------AIASAAY 493 (985)
Q Consensus 467 ------------------------~~~~~~--~------------~~~~--~~i~~~~----~~---------~l~~~L~ 493 (985)
+.++.+ . .+++ ++|.+++ +. ++.+.|.
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~ 564 (755)
T PRK15029 485 TDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG 564 (755)
T ss_pred ccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHH
Confidence 222211 0 1243 4555432 33 8999998
Q ss_pred HcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 494 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 494 ~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
++||.++..+...+++.++..+|++++++|+++|..
T Consensus 565 ~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~~ 600 (755)
T PRK15029 565 RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCS 600 (755)
T ss_pred HcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 899999998889999999999999999999999974
No 178
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.74 E-value=5e-16 Score=179.72 Aligned_cols=303 Identities=15% Similarity=0.117 Sum_probs=190.0
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC---ccceecChHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~---~~~~~~~sGa-~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
.+|..++.+.+++++++.+|.+ ...+.+++|+ ++.. .+++.+. .++|+|+++++.|..+...++..|+
T Consensus 64 ~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 135 (389)
T PRK05957 64 VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFM---NAILAIT-----DPGDEIILNTPYYFNHEMAITMAGC 135 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHH---HHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCC
Confidence 4688888889999999999974 3345555554 3432 2232221 3678999998877777777788999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cC--C
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG--L 776 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g--~ 776 (985)
+++.++.+.++.+|+++|+++++ +++++|++++| |++|.+.+ ++++|+++|+++|+++++|+++..-. .. .
T Consensus 136 ~~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~ 212 (389)
T PRK05957 136 QPILVPTDDNYQLQPEAIEQAIT---PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212 (389)
T ss_pred EEEEeecCCCCCcCHHHHHHhcC---cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCc
Confidence 99999998778899999999997 78999999998 57998872 39999999999999999999864111 10 0
Q ss_pred CCC----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 777 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 777 ~~~----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
..+ ....--+++.|+.|.|+. .|.++|++++++++++.+.... .+...+.+...+.
T Consensus 213 ~~~~~~~~~~~~~i~~~S~SK~~g~----~GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~q~-- 272 (389)
T PRK05957 213 FSPGSIPGSGNHTISLYSLSKAYGF----ASWRIGYMVIPIHLLEAIKKIQ--------------DTILICPPVVSQY-- 272 (389)
T ss_pred cChhhCCCccCcEEEEecchhhccC----ccceeEEEecCHHHHHHHHHHH--------------hhcccCCCcHHHH--
Confidence 011 111123667778888743 3677999999887765543210 0001111101111
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCe-eEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i-~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~ 930 (985)
++..++. -+.+-+.+..++..++.+++.+.|++...+ .+..+++.+ .+.++++ .+.+..++++.|. ++
T Consensus 273 --~~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~--~~~~~~~-----~~~~~~~~~~~l~~~~ 342 (389)
T PRK05957 273 --AALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAF--YCFLKVN-----TDLNDFELVKQLIREY 342 (389)
T ss_pred --HHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeE--EEEEeCC-----CCCChHHHHHHHHHHC
Confidence 1112221 122224455555667778888888762111 111121111 1234543 2567889999986 58
Q ss_pred CCccCCC-CC--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 931 GFHGPTM-SW--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 931 Gi~~~~~-~~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
||.+... .| +..+++|++++.. +++++. +.++.|.+.+++
T Consensus 343 gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~---~~~~~l~~~~~~ 385 (389)
T PRK05957 343 RVAVIPGTTFGMKNGCYLRIAYGAL-QKATAK---EGIERLVQGLKT 385 (389)
T ss_pred CEEEccchhhCCCCCCEEEEEEecC-CHHHHH---HHHHHHHHHHHh
Confidence 9987432 12 2246899998653 566776 677766666554
No 179
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.74 E-value=1.2e-15 Score=174.74 Aligned_cols=280 Identities=17% Similarity=0.147 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..+.++++.+|+++|++ ++.+++|+|.++.+++.++. . +||+|++++..|.+....+ +..|++++.++.
T Consensus 44 ~~~~~l~~~la~~~g~~--~i~~~~g~t~al~~~l~~~~-~--~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGMD--EARVTPGAREGKFAVMHSLC-E--KGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCCc--eEEEeCCHHHHHHHHHHHhc-C--CCCEEEEcCCcchHHHHHH----HhcCCEEEEEecCC
Confidence 35778899999999994 48888999988887776652 3 7899999999998887554 346888877753
Q ss_pred --------hhhhc-cC-------CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccce
Q 001990 289 --------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGAD 350 (985)
Q Consensus 289 --------~~l~~-l~-------~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-~p~~~GaD 350 (985)
+++++ ++ +++++|++++| |.+|.+.|+++|+++||++|++++|| ...+.|.+. +..++|+|
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD-~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLN-GAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEE-CCcccCCcCCCHHHcCCC
Confidence 23433 43 37899999998 46999999999999999999999995 344555442 34578999
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHH
Q 001990 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (985)
Q Consensus 351 i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~ 429 (985)
++++|+ |+|+.| +++|++++++++++++-... .+ |.+. + .....+|++. .+.+++
T Consensus 194 ~~~~s~~K~l~~~-----~~~G~l~~~~~~~~~l~~~~---------~~-~~~~-----~-~~~~~~~~~~---~~~~~~ 249 (361)
T cd06452 194 FIVGSGHKSMAAS-----APIGVLATTEEWADIVFRTS---------QM-FKIK-----E-VELLGCTLRG---APLVTL 249 (361)
T ss_pred EEEecCCccccCC-----CCeEEEEECHHHHHHHhccc---------cc-cccc-----e-eeeeccccCc---hHHHHH
Confidence 999998 777533 35799999988877652100 00 1110 0 0001122222 233344
Q ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCcceEEEecCC-----------HHHHHHHHHHcC
Q 001990 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-----------AHAIASAAYKIE 496 (985)
Q Consensus 430 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~~~~~i~~~~-----------~~~l~~~L~~~G 496 (985)
.+++ ... .+-++ ...+..+++++++++|+++.|++++.. ...+.+.++.+. +.++.+.|.++|
T Consensus 250 ~~al--~~~-~~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 325 (361)
T cd06452 250 MASF--PHV-KERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRG 325 (361)
T ss_pred HHHH--HHH-HHHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcC
Confidence 4444 111 12233 334445677999999999933998732 111223333321 346999999999
Q ss_pred ceeeeec-CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 497 MNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 497 i~~~~~~-~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
|.+.... ...+|++. ...|++|++.++++|+.
T Consensus 326 I~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~~ 358 (361)
T cd06452 326 IHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFKE 358 (361)
T ss_pred ceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHHH
Confidence 9863322 35677776 44799999999999973
No 180
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.74 E-value=6.3e-16 Score=179.70 Aligned_cols=297 Identities=14% Similarity=0.111 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcE---------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK--------- 703 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~--------- 703 (985)
..++.+.|+++++.+. .++.+||+++++++++++|.|...++..++.+|+. ...+||.........|..
T Consensus 83 ~~~la~~l~~~~~~~~-v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 161 (406)
T PRK12381 83 VLRLAKKLIDATFADR-VFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPL 161 (406)
T ss_pred HHHHHHHHHhhCCCCe-EEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCC
Confidence 4578899999887654 47889999999999999988754333224556665 667899876554433321
Q ss_pred ---EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC-ccccc---cCHHHHHHHHHHcCCEEEEEccccccccCC
Q 001990 704 ---IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (985)
Q Consensus 704 ---v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~-~G~i~---~di~eI~~la~~~g~lliVD~a~~~~~~g~ 776 (985)
+..+|. .|++++++.++ +++++|+++..+. .|++. .++++|.++|++||+++++|++|. +++-.
T Consensus 162 ~~~~~~~~~-----~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~gr~ 232 (406)
T PRK12381 162 PPDIRHAAY-----NDLNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-GVGRT 232 (406)
T ss_pred CCCeeEeCC-----CCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-CCCCC
Confidence 233333 48999999997 6888888853243 45442 269999999999999999999983 33111
Q ss_pred CCC---Cc--CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 TSP---GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 ~~~---g~--~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
... .. ..+|++++ .|.++ ||..+|++++++++.+.+..... + .. +.+++.
T Consensus 233 G~~~~~~~~~v~pDi~t~--sK~l~-----gG~~ig~~~~~~~~~~~~~~~~~-------------~-~t----~~~~pl 287 (406)
T PRK12381 233 GELYAYMHYGVTPDVLTT--AKALG-----GGFPIGAMLTTEKCASVMTVGTH-------------G-TT----YGGNPL 287 (406)
T ss_pred cchhhhHhhCCCCCEEEe--hhhhh-----CCCceEEEEEcHHHHhhcCCCCC-------------C-CC----CCCCHH
Confidence 111 11 23677544 47763 45678999898887765532110 0 11 112344
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-c--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-H--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
.++++.+.+..+..+. ..++..++.++|.++|++ . +.+.........+ +.+.+.. ........+.+.|.
T Consensus 288 ~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~--~~~~l~~---~~~~~~~~~~~~l~ 359 (406)
T PRK12381 288 ASAVAGKVLELINTPE---MLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLL--IGCVLNA---EYAGKAKQISQEAA 359 (406)
T ss_pred HHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEE--EEEEecC---chhhHHHHHHHHHH
Confidence 4555566666664433 345666778888888876 2 2221111000111 2233320 00013467888999
Q ss_pred HCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHcc
Q 001990 929 DYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAG 979 (985)
Q Consensus 929 e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~ 979 (985)
++|+.+.... ++.||++|+..+|++||| ++++.|+++++++.+.|
T Consensus 360 ~~Gv~v~~~g---~~~lRl~p~~~~t~~~i~---~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 360 KAGVMVLIAG---PNVVRFAPALNISEEEIT---TGLDRFARACERFVSRG 404 (406)
T ss_pred HCCcEEeeCC---CCEEEEeCCccCCHHHHH---HHHHHHHHHHHHHHhcc
Confidence 9999974322 368999999999999999 99999999988776544
No 181
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.74 E-value=1.1e-15 Score=177.31 Aligned_cols=306 Identities=14% Similarity=0.156 Sum_probs=187.9
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++...+.+++.+.+|. +... +.+++++++...++.++. .++++|+++++.|..+...++..|+++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~~g~~~ 139 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALL--------DPGDEVIIPAPYWVSYPEMVKLAGGVP 139 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhc--------CCCCEEEecCCCCcchHHHHHHcCCEE
Confidence 56555555555555555454 3333 444545555533333221 367889999998888877788899999
Q ss_pred EEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-CCC-
Q 001990 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLT- 777 (985)
Q Consensus 705 ~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g~~- 777 (985)
+.++.+++ +.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..... +..
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 216 (393)
T PRK05764 140 VFVPTGEENGFKLTVEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF 216 (393)
T ss_pred EEEecCcccCCcCCHHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc
Confidence 99998743 5789999999996 68889999998 5789874 2589999999999999999998742111 100
Q ss_pred -C-----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 778 -S-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 778 -~-----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
. +...+.++++.|++|+|+.| |.++|+++.++++.+.+.... . ..+.+++ ..
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~~-~-----------~~~~~~~------~~ 274 (393)
T PRK05764 217 TSIASLSPELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKLQ-S-----------HSTSNPT------SI 274 (393)
T ss_pred ccHHHcCCCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHHH-h-----------hcccCCC------hH
Confidence 0 12234578888888988543 567999998877665542110 0 0011111 11
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HC
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~ 930 (985)
...++...+.. ..+.+.+..+...++.+++.+.|++...+.+..+.+.++ +.++++......+.+..++.+.|. ++
T Consensus 275 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (393)
T PRK05764 275 AQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFY--VFPNVSKLLGKSITDSLEFAEALLEEA 351 (393)
T ss_pred HHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceE--EEEecccccccccCCHHHHHHHHHHhC
Confidence 11112222221 123344445555667788888887621222222222221 223443110001223578888775 57
Q ss_pred CCccCC-CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 931 GFHGPT-MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 931 Gi~~~~-~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
||.+.. ..++.++.+|+++. .++++++ ++++.|.+++++
T Consensus 352 gi~v~~g~~f~~~~~vRis~~--~~~~~~~---~~i~~l~~~~~~ 391 (393)
T PRK05764 352 GVAVVPGIAFGAPGYVRLSYA--TSLEDLE---EGLERIERFLES 391 (393)
T ss_pred CEEEccccccCCCCEEEEEec--CCHHHHH---HHHHHHHHHHHh
Confidence 998643 23444689999986 4799999 999999888764
No 182
>PLN02624 ornithine-delta-aminotransferase
Probab=99.74 E-value=8.7e-16 Score=181.21 Aligned_cols=296 Identities=17% Similarity=0.225 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHh-cCCC-CCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~-~g~~-~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
..++.+.|+++++.+. .++.+||++++++++..+|.|... +|.. .+.+||. ...+||....+....+-
T Consensus 119 ~~~la~~L~~~~~~~~-~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 197 (474)
T PLN02624 119 FPEFAEYLTSMFGYDM-VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG 197 (474)
T ss_pred HHHHHHHHHhhcCCCe-EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCC
Confidence 4578889999998765 467899999999999988876432 2321 1234554 55788876555432211
Q ss_pred ----EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc-C--HHHHHHHHHHcCCEEEEEcccccccc
Q 001990 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE-G--IDEICKIIHDNGGQVYMDGANMNAQV 774 (985)
Q Consensus 703 ----~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~-d--i~eI~~la~~~g~lliVD~a~~~~~~ 774 (985)
.+..+|+ .|++.+++.++.+.+++++|+++.+ +..|.+.+ + +++|.++|++||+++|+|++|. +++
T Consensus 198 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~G 271 (474)
T PLN02624 198 PLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLA 271 (474)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcC
Confidence 1233444 2889999999765578999999876 46788762 2 9999999999999999999984 332
Q ss_pred CCCCC-----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 775 GLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 775 g~~~~-----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
-.... ....+|++++ .|.| ++|+..+|.++++++++..+.....+ . ++.++
T Consensus 272 rtG~~~a~~~~~i~pDiv~l--sK~l----ggG~~pigav~~~~~i~~~~~~~~~~------------~------T~~g~ 327 (474)
T PLN02624 272 RTGKMLACDWEEVRPDVVIL--GKAL----GGGVIPVSAVLADKDVMLCIKPGEHG------------S------TFGGN 327 (474)
T ss_pred cCcchhhHHhcCCCCCEEEe--cccc----cCCCCcceeeeecHHHHhHhccCCcC------------C------CCCCC
Confidence 11100 1224688876 3766 44556688888887665443211000 1 11224
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CC--ee-EcCCCCceeEEEEEEecCccccCCCCHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP--IL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~--i~-~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l 923 (985)
+..++++.+.|..+..+++. ++..++.++++++|++. +. +. ..+. + .+..+.++.+. .......++
T Consensus 328 pl~~aaa~aaLe~l~~~~l~---~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~-G-~~~~i~l~~~~---~~~~~a~~~ 399 (474)
T PLN02624 328 PLASAVAMAALQVVQDEKLA---ERSAKLGQELRDQLQKIQKQFPKLIKEVRGR-G-LLNAVVLNSPK---LGPVSAYDV 399 (474)
T ss_pred HHHHHHHHHHHHHHHhchHH---HHHHHHHHHHHHHHHHHHHhCCCceEEEEee-E-EEEEEEecCCC---cChHHHHHH
Confidence 44555566667666544433 34455667777777652 22 11 1111 1 12222232110 001234678
Q ss_pred HHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 924 ~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
++.|.++||.+.... .+.|||+|+..+|++||| ++++.|++++++
T Consensus 400 ~~~L~e~GV~v~p~~---~~~lR~~p~l~~t~e~id---~~l~~L~~~l~~ 444 (474)
T PLN02624 400 CLKLKERGLLAKPTH---DTIIRLAPPLSISEDELQ---ECSKALSDVLEH 444 (474)
T ss_pred HHHHHhCCeEEecCC---CCEEEEECCccCCHHHHH---HHHHHHHHHHHH
Confidence 999999999975322 478999999999999999 999999988754
No 183
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.74 E-value=1.3e-16 Score=182.87 Aligned_cols=281 Identities=15% Similarity=0.182 Sum_probs=179.5
Q ss_pred HHHHHHHHHHhCCCccceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++.+++++|++...+.. ++|+++. ...+++.+. .++++|+++++.+..+...++..|++++.++.+.++
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~--i~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEV--IDTLMRTFI-----DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHH--HHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 57889999999988765555 5565422 222233221 367889998876655555577889999999977777
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC--CcCCCcEEEeC
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGADVCHLN 790 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~--g~~g~Di~~~s 790 (985)
.+|++++++.++ +++++|++++| |++|.+. +++++.++|+++|+++++|+++......-..+ ...+--+++.|
T Consensus 145 ~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 145 SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLI-PEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEe
Confidence 899999999986 67888999998 5799998 89999999999999999999984211110000 01111255677
Q ss_pred CcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh-HH
Q 001990 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG-LT 869 (985)
Q Consensus 791 ~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g-l~ 869 (985)
++|+|+. .|.++|++++++++...+.... ....++ .....++..++ ...+ +.
T Consensus 221 ~SK~~g~----~GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~------~~~~~~a~~~l---~~~~~~~ 273 (361)
T PRK00950 221 FSKVFGL----AGLRIGYGFVPEWLIDYYMRAK--------------TPFSLT------RLSQAAAIAAL---SDKEYIE 273 (361)
T ss_pred ehHhhcC----chhhcchhcCCHHHHHHHHHhc--------------CCCCCC------HHHHHHHHHHh---cCHHHHH
Confidence 8888754 3667999998877664332100 000111 11111222233 2223 33
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CCC--CCCEEE
Q 001990 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP--VPGTLM 946 (985)
Q Consensus 870 ~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~p--v~~~lr 946 (985)
+..++..++.+++.+.|. +.+ .++++ +.+.++++ +.+..++++.|.++||.+... .++ .++.+|
T Consensus 274 ~~~~~~~~~r~~l~~~l~--~~~--~~~~~---~~i~~~~~------~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lR 340 (361)
T PRK00950 274 KSIEHGIKSREYLYNELP--FKV--YPSEA---NFVLVDVT------PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIR 340 (361)
T ss_pred HHHHHHHHHHHHHHhhcC--eeE--CCCcc---eEEEEECC------CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEE
Confidence 334444455555655554 222 12222 22344543 457889999999999987432 232 146899
Q ss_pred EeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 947 IEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 947 is~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
++++ +.+|++ +++++|++++
T Consensus 341 is~~---~~~~~~---~l~~~L~~il 360 (361)
T PRK00950 341 VSIG---TFEENE---RFLEILKEIV 360 (361)
T ss_pred EECC---CHHHHH---HHHHHHHHHh
Confidence 9985 788999 9999998864
No 184
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=8.2e-16 Score=176.04 Aligned_cols=271 Identities=17% Similarity=0.159 Sum_probs=186.4
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l 291 (985)
++++.+|+|.|.+. +.++.+|++++.++++++ +. +||+||+++..|+.+...+....+.+|+++.+++. +++
T Consensus 65 ~Le~~iA~le~~~~--~~~~~sG~~Ai~~~l~al-l~--~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 65 AFQAAIVELEGGAG--TALYPSGAAAISNALLSF-LK--AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 47789999998764 789999999988888775 33 89999999999988887665555678999998875 456
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001990 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (985)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP 368 (985)
++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++||||++.|+ |+++++- .-
T Consensus 140 ~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD-~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~---d~ 215 (394)
T PRK09028 140 RELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLD-NTWASPINSRPFEMGVDISIQAATKYIVGHS---DV 215 (394)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCccccccCCccccCceEEEEeCCeEecCCC---CE
Confidence 66 7889999999998 78999999999999999999999994 56677777788999999999999 8876431 11
Q ss_pred ceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHH
Q 001990 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (985)
Q Consensus 369 ~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~ 448 (985)
-.|.++.++++.+++-. .++.-|. + .++. ..|+...|-+-|.-+.+
T Consensus 216 ~~G~~~~~~~~~~~l~~-------------------------~~~~~G~--~--~~p~-----~a~l~~rgl~TL~lR~~ 261 (394)
T PRK09028 216 MLGTATANEKHWDQLRE-------------------------HSYLMGQ--C--TSPD-----DVYLAMRGLRTLGVRLA 261 (394)
T ss_pred EEEEEECCHHHHHHHHH-------------------------HHHhcCC--C--CCHH-----HHHHHHcccCcHHHHHH
Confidence 24555555554433200 0001111 0 0111 22456667777788888
Q ss_pred HHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecC--C---HHHHHHHHHHc--Cceee---e
Q 001990 449 RVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCA--D---AHAIASAAYKI--EMNLR---V 501 (985)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~--~---~~~l~~~L~~~--Gi~~~---~ 501 (985)
++.++|..+++.|++.+.++ |. +. | +..-|+|..+ + +.++.+.|.=. +..+. .
T Consensus 262 ~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~s 341 (394)
T PRK09028 262 QHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFES 341 (394)
T ss_pred HHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcc
Confidence 89999999999999985443 32 11 1 1124677765 2 23344443311 11110 0
Q ss_pred ------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 502 ------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 502 ------------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
..++.+|+|++.-+.++-|+.|.++|.
T Consensus 342 Lv~~p~~~~~~~~~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~ 386 (394)
T PRK09028 342 LILGVFGINKLRTATNWDFSKPLIRLHIGLEDVDDLIADLEAGFE 386 (394)
T ss_pred eeECCCCcCccCchhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 113568999998776666677777775
No 185
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.73 E-value=4.7e-16 Score=178.01 Aligned_cols=211 Identities=15% Similarity=0.148 Sum_probs=156.4
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+. +.++.+|++++.++++++ +. +||+||+++..|+.+...+....+..|+++++++. ++
T Consensus 53 ~~lE~~lA~l~g~~~--~~~~~sG~~Ai~~al~al-l~--~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~ 127 (377)
T TIGR01324 53 FALQDAMCELEGGAG--CYLYPSGLAAVTNSILAF-VK--AGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGED 127 (377)
T ss_pred HHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-cC--CCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 347789999999875 778999999988887776 33 89999999999987776655445567999988876 55
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.|.+..|.++|+||+++|+ |+++++- +
T Consensus 128 l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD-~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~---d 203 (377)
T TIGR01324 128 IATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMID-NTWAAGLLFKPLEHGVDISIQAGTKYLVGHS---D 203 (377)
T ss_pred HHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCccccCceEEEecCceeccCCC---C
Confidence 776 8889999999998 78999999999999999999999995 56777877788999999999998 8887542 2
Q ss_pred CceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHH
Q 001990 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (985)
Q Consensus 368 P~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 447 (985)
-..|+++++++.++++-. .++-.|+. . ++ ...|+...|.+-+....
T Consensus 204 ~~gG~v~~~~~~~~~l~~-------------------------~~~~~G~~-l---~p-----~~a~~~~rgl~tl~~R~ 249 (377)
T TIGR01324 204 IMIGTVVANARTWDQLRE-------------------------HSYLMGQM-V---DA-----DDAYTTLRGLRTLGVRL 249 (377)
T ss_pred ceEEEEEeCHHHHHHHHH-------------------------HHHHhCCC-C---CH-----HHHHHHHhhhhhHHHHH
Confidence 235788888765544310 00111110 0 11 11223344445556667
Q ss_pred HHHHHHHHHHHHHHhcCCCE
Q 001990 448 QRVHGLAGTFALGLKKLGTV 467 (985)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~ 467 (985)
+++.++|..+++.|++...+
T Consensus 250 ~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 250 KQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 88889999999999987434
No 186
>PRK07678 aminotransferase; Validated
Probab=99.73 E-value=7.2e-16 Score=180.77 Aligned_cols=312 Identities=15% Similarity=0.164 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc----------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM---------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~---------- 702 (985)
..++.+.|+++++.....++.+||+++++++++.+|.|...+|..++.+||. ..++||....++...|.
T Consensus 91 ~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 170 (451)
T PRK07678 91 AIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPL 170 (451)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCC
Confidence 4578888999886554457889999999999999998865555334566775 66899987665433221
Q ss_pred --EEEEEeCCCCCC---------CC---HHHHHHHHH-hcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEE
Q 001990 703 --KIVSVGTDAKGN---------IN---IEELRKAAE-ANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQV 763 (985)
Q Consensus 703 --~v~~v~~~~~g~---------iD---le~L~~~i~-~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~ll 763 (985)
.+..+|...... .| ++.+++.++ ++++++++|+++-. ...|++.++ ++++.++|++||+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~ll 250 (451)
T PRK07678 171 APGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALL 250 (451)
T ss_pred CCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 123333221111 12 234666675 33468888888743 346776532 999999999999999
Q ss_pred EEEccccccccCCCCCCc------CC--CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCC
Q 001990 764 YMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEK 835 (985)
Q Consensus 764 iVD~a~~~~~~g~~~~g~------~g--~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~ 835 (985)
|+|+++ .|+.+.|+ +| +|++++ .|.++ +|+-.+|.+.+++++.+.+.....
T Consensus 251 I~DEV~----tGfGRtG~~~~~~~~gv~PDivt~--gK~lg----gG~~Pi~av~~~~~i~~~~~~~~~----------- 309 (451)
T PRK07678 251 ISDEVI----CGFGRTGKAFGFMNYGVKPDIITM--AKGIT----SAYLPLSATAVKKEIYEAFKGKGE----------- 309 (451)
T ss_pred EEeehh----hcCCcCchhHHHHhcCCCCCEEEe--ecccc----cCCcceeEEEEcHHHHHHHhccCc-----------
Confidence 999986 23333332 22 799876 37763 343236777788877654432100
Q ss_pred CCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEec
Q 001990 836 SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLR 910 (985)
Q Consensus 836 ~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~ 910 (985)
.+.....+++.|++..++++.+.|..+.++++. ++..++.++|+++|++. ...+ ..|. +. +..+.+.-+
T Consensus 310 -~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl-~~~i~~~~~ 383 (451)
T PRK07678 310 -YEHFRHVNTFGGNPAACALALKNLEIMENENLI---ERSAQLGELLLEQLKEELGEHPLVGDIRGK-GL-LVGIELVND 383 (451)
T ss_pred -ccccccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHhcCCCEEEEEee-ce-EEEEEEecC
Confidence 000001123456778888888889888766543 45666778888877541 2221 1121 11 111222101
Q ss_pred C-cccc-CCCCHHHHHHHHHHCCCccCCCCC--C-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 911 G-LKNT-AGIEPEDVAKRLMDYGFHGPTMSW--P-VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 911 ~-~~~~-~g~~~~~l~~~L~e~Gi~~~~~~~--p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
. .+.. .......+.+.|.++|+++..... | -.+.||++|+..+|++||| +++++|.++++++
T Consensus 384 ~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid---~~~~~l~~~l~~~ 450 (451)
T PRK07678 384 KETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIA---FIVGTLKTALERI 450 (451)
T ss_pred CcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHH---HHHHHHHHHHHhc
Confidence 0 0000 001145788889999998743211 1 1368999999999999999 9999999988754
No 187
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=5e-16 Score=179.10 Aligned_cols=275 Identities=16% Similarity=0.128 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch--
Q 001990 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (985)
Q Consensus 212 ~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~-- 289 (985)
...++++.+|+++|.+. ..++.+|++++.+++.. +. +||+||+++..|+++...+...++..|++++++|..
T Consensus 55 ~~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~~--l~--~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~ 128 (390)
T PRK08064 55 TREALEDIIAELEGGTK--GFAFASGMAAISTAFLL--LS--KGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNL 128 (390)
T ss_pred hHHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHHH--hC--CCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCH
Confidence 34567899999999875 56778888887765542 23 789999999999988888877777789999998764
Q ss_pred -hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001990 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (985)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~ 365 (985)
++++ ++++|++|++++| |++|.+.|+++|.++||++|++++||. ..+.+....|.++|+|+++.|+ |.+++|.+
T Consensus 129 ~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~-a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~- 206 (390)
T PRK08064 129 EEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDN-TFLTPLLQKPLDLGADVVLHSATKFLAGHSD- 206 (390)
T ss_pred HHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEEC-CCCcccccCchhhCCcEEEeecceeccCCcc-
Confidence 4555 7889999999998 689999999999999999999999953 4455545556789999999998 77765422
Q ss_pred CCCceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHH
Q 001990 366 GGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (985)
Q Consensus 366 GGP~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (985)
--+|+++++ +++.+++.... ...| ++. .+. - .|+...|-+-+.
T Consensus 207 --~laG~~v~~~~~~~~~l~~~~-------------------------~~~g---~~~-~~~---~--a~l~~~gl~tl~ 250 (390)
T PRK08064 207 --VLAGLAVVKDEELAQKLYFLQ-------------------------NSFG---AVL-GVQ---D--CWLVLRGLKTLH 250 (390)
T ss_pred --ceeEEEEeCCHHHHHHHHHHH-------------------------HhcC---CCC-CHH---H--HHHHHcccCcHH
Confidence 124777775 35555441100 0001 100 111 1 112334445566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCE-EEc-CC----C-----------CcceEEEecCCHHHHHHHHHHcCce-----ee--
Q 001990 445 TIAQRVHGLAGTFALGLKKLGTV-EVQ-GL----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----LR-- 500 (985)
Q Consensus 445 ~i~~~~~~~a~~l~~~L~~~g~~-~~~-~~----~-----------~~~~~~i~~~~~~~l~~~L~~~Gi~-----~~-- 500 (985)
...++..+++..+.+.|++.+.+ +++ .. + +...|+|.+.+.+++.+.+...++. ++
T Consensus 251 ~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~ 330 (390)
T PRK08064 251 VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAV 330 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCC
Confidence 77788889999999999987533 222 11 1 1124777776544455555555552 11
Q ss_pred ----------------e-------ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001990 501 ----------------V-------VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (985)
Q Consensus 501 ----------------~-------~~~~~lris~~~~~t~edid~ll~~l~~~ 530 (985)
. +.++.+|+|++..++++.|++|.++|...
T Consensus 331 ~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 331 ESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred cceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 0 12478999999999999999999999754
No 188
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.73 E-value=4.9e-17 Score=180.75 Aligned_cols=166 Identities=19% Similarity=0.198 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.+.++++.+++++|.+.+.+.++++++|+.++++++. .++++|++++..|.++...+.+.|+++++++++.+
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 4789999999999998766667777777755554432 47789999999998877778889999999987533
Q ss_pred ------CCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccc--cCC-C-CCCcC
Q 001990 713 ------GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGL-T-SPGYI 782 (985)
Q Consensus 713 ------g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~--~g~-~-~~g~~ 782 (985)
+.+|+++++++++++ +++++|++++||++|.+. |+++|+++||++|++++||++|.... .+. . ....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p~~~G~~~-dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEH-PDAKAAVITNPTYYGICY-NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhC-CCceEEEEECCCCCCEec-CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 479999999999743 578999999999999998 89999999999999999999985321 111 1 12346
Q ss_pred CCcEEEeCCcccccccCCCCCC-cceeeeeccc
Q 001990 783 GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH 814 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~ 814 (985)
++|+++.|+||++ +|| ++|++.+++.
T Consensus 210 ~~div~~S~hK~l------~g~~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTL------PALTQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhccc------chHhHHHHHHhCCC
Confidence 8999999999997 344 4567777654
No 189
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.73 E-value=2.2e-16 Score=180.30 Aligned_cols=302 Identities=11% Similarity=0.038 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcc--ce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH-HHHh---cCc
Q 001990 630 YQEMFNNLGEWLCTITGFDSF--SL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAM---CGM 702 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~~--~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~-~~~~---~G~ 702 (985)
..+.+++.++.+++++|.+.. .+ ..++|+.+.++++..+ . .+ +.+++....|+.... .+.. .+
T Consensus 39 f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---~-----~~-~~l~i~~G~~~~~~~~~a~~~~~~~- 108 (361)
T TIGR01366 39 VKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---I-----EK-KSLHLSFGEFSSKFAKAVKLAPWLG- 108 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc---c-----cc-cccEEecCHHHHHHHHHHHhhhccC-
Confidence 346788999999999998532 23 3466776665444332 1 12 223333333432211 2222 33
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCc
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~ 781 (985)
++..++.++...++. .++ +++++|.+++. |.+|++. |+++| +|++|++++||++|+.+...+ +..
T Consensus 109 ~~~~~~~~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~-pi~~I---~~~~g~~~iVDavqs~g~~~i-dv~- 174 (361)
T TIGR01366 109 EPIIVTADPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAV-PVRRP---EGSDDALVVIDATSGAGGLPV-DIA- 174 (361)
T ss_pred CceEEecCCCCCCCC-----ccC---CCCCEEEEcccCCccceec-ccccc---cccCCCeEEEEcCccccCCCC-CHH-
Confidence 677777655444443 233 78999998875 6799999 89888 588999999999998666544 222
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccC-----CCC---CCCCCCCCCCCcccccchhhhHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-----GGI---PAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~-----~~~---~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
.+|++++++||+|+.| ||++++++++++.+.+.....+.. .+. .....+.+|+++... .....+
T Consensus 175 -~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i--~~i~~l 246 (361)
T TIGR01366 175 -ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAI--ATLALL 246 (361)
T ss_pred -HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchH--HHHHHH
Confidence 2899999999998532 367788888876654432211110 000 001112233433311 011122
Q ss_pred HHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhc-c-CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC
Q 001990 854 PISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (985)
Q Consensus 854 ~~A~a~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~-~-~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~ 930 (985)
. +.+..+.++ |+....++...++++++++|.+ + +.+...++........++.+. .+.+..++.+.|.++
T Consensus 247 ~---~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-----~g~~~~~v~~~L~~~ 318 (361)
T TIGR01366 247 A---EQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-----DDIDAATVAKILRAN 318 (361)
T ss_pred H---HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-----CccCHHHHHHHHHHC
Confidence 3 334444444 4777778888999999999987 3 333222211111111234443 367889999999999
Q ss_pred CCccCCCCCCC-CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 931 GFHGPTMSWPV-PGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 931 Gi~~~~~~~pv-~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
||.+......+ .+.+||+...++|++||| +|+++|++++++
T Consensus 319 gI~i~~~~~~l~~~~vRis~~~~~t~~di~---~l~~al~~~~~~ 360 (361)
T TIGR01366 319 GIVDTEPYRKLGRNQLRVAMFPAIDPDDVE---ALTECVDWVVER 360 (361)
T ss_pred CCeeccCccccCCCcEEEEcCCCCCHHHHH---HHHHHHHHHHhh
Confidence 99874321111 357999999999999999 999999998764
No 190
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.73 E-value=2.1e-16 Score=179.33 Aligned_cols=295 Identities=10% Similarity=0.038 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHhCCCc---cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCc----HHHHHhcCc
Q 001990 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN----PATAAMCGM 702 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~---~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~----~~~~~~~G~ 702 (985)
+.++++++++.++++++.+. +.++.+||+.|.++++..+. .+++++++... |.+ ...++..|+
T Consensus 35 f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--------~~~~~~l~i~~--G~fg~r~~~~a~~~g~ 104 (349)
T TIGR01364 35 FEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--------AEGKVADYIVT--GAWSKKAAKEAKKYGV 104 (349)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC--------CCCCeEEEEEC--CHHHHHHHHHHHHhCC
Confidence 45788899999999999743 33555678877766655432 24556665432 222 223567788
Q ss_pred EEEEEeCCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC
Q 001990 703 KIVSVGTDAKG----NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (985)
Q Consensus 703 ~v~~v~~~~~g----~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~ 777 (985)
++.+..++.+ .+|+++++ ++ +++++|.+++. +.+|+.. + ++++.++++++||++++.+...+
T Consensus 105 -~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~-~-----~l~~~~~~l~iVDavss~g~~~i- 171 (349)
T TIGR01364 105 -VNVVASGKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEF-R-----ELPDVKNAPLVADMSSNILSRPI- 171 (349)
T ss_pred -cEEEeccccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEec-c-----eecccCCCeEEEEccccccCccC-
Confidence 7777754332 45666655 23 57888888875 5699987 4 56677899999999997665543
Q ss_pred CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC---CCCCCCCCCCCcccccchhhhHHH
Q 001990 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 778 ~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~---~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
+..+ .|++++++||+|+ .||+|++++++++.+.+.+.... ..+. .......+|+++.. +.
T Consensus 172 d~~~--~d~~~~ssqK~lg------P~Glg~l~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Tp~~~~--------i~ 234 (349)
T TIGR01364 172 DVSK--FGLIYAGAQKNIG------PAGLTVVIVRKDLLGRASRITPS-MLNYKIHAENDSMYNTPPTFA--------IY 234 (349)
T ss_pred CHHH--ccEEEEecccccC------CCceEEEEECHHHHhhcccCCCC-cchHHHHHhcCCCCCCCcHHH--------HH
Confidence 2333 4699999999883 46899999998877655432111 0110 00011123444331 12
Q ss_pred HHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhccCCeeEcC--CCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 855 ISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPILFRG--VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 855 ~A~a~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g--~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
+..+++..+.++ |+.++.++...+++++++.|++...+.... +..+....+.+.++. .+. ..++.+.+.++|
T Consensus 235 al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~----~~~-~~~~~~~~~~~G 309 (349)
T TIGR01364 235 VSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGN----EEL-EKRFLKEAEERG 309 (349)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCC----hhH-hHHHHHHHHHCC
Confidence 223455666667 688888999999999999998732221111 111111123344331 011 256667788899
Q ss_pred CccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 932 FHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 932 i~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+++..... ..+.+|+|+..++|+|||| +|+++|+++.+
T Consensus 310 i~~~~~~~-~~g~vRvS~~~~nt~edid---~l~~al~~~~~ 347 (349)
T TIGR01364 310 LVSLKGHR-SVGGMRASIYNAMPLEGVQ---ALVDFMKEFQK 347 (349)
T ss_pred CcccCCcc-ccCeeEEECcCCCCHHHHH---HHHHHHHHHHH
Confidence 96543221 2478999999999999999 99999998764
No 191
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.73 E-value=4.5e-16 Score=186.12 Aligned_cols=301 Identities=14% Similarity=0.104 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.+.++++..|++||.+.+.+.+|++|+|+.++++++. +++++||+++++|.+....+.+.|++++++++..+
T Consensus 196 ~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn 267 (714)
T PRK15400 196 PHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSA--------PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRN 267 (714)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 4789999999999999998899998988877777653 47899999999999988889999999999987543
Q ss_pred -----CCCC-----HHHHHHHHHhcCCCeE---EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC--
Q 001990 713 -----GNIN-----IEELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-- 777 (985)
Q Consensus 713 -----g~iD-----le~L~~~i~~~~~~t~---~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-- 777 (985)
|.++ .+.++++|+++ ++.+ .+++++|++.|++. |+++|.++||.++ ++||+||. +...|.
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~-p~ak~p~~~vit~pTYdG~~y-d~~~I~~~~~~~~--ilvDEAwg-ah~~F~p~ 342 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKET-PNATWPVHAVITNSTYDGLLY-NTDFIKKTLDVKS--IHFDSAWV-PYTNFSPI 342 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhC-ccccCccEEEEECCCCccEec-CHHHHHHHhCCCC--EEEEccch-hhhccCcc
Confidence 3456 89999999876 3434 79999999999998 9999999999887 68999984 222221
Q ss_pred ----CCCcCCC---c--EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 778 ----SPGYIGA---D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 778 ----~~g~~g~---D--i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
.+-..|+ | +++.|.||+++.-. ..+++-++..+ +. .+ +-.. ...-.+||+ .|.
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alT-----QaS~LHvkg~v-d~--~~-~n~a-----~~m~~STSP----sY~ 404 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFS-----QASMIHVKGDV-NE--ET-FNEA-----YMMHTTTSP----HYG 404 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchh-----HHhHHHHcCCC-CH--HH-HHHH-----HHHHcCCCc----HHH
Confidence 1112345 5 99999999995321 33444443211 00 00 0000 000011221 121
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--c------CCeeEcCC---------------C-------
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--H------YPILFRGV---------------N------- 898 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~------~~i~~~g~---------------~------- 898 (985)
....+..|.+.|.. ..| .+..+..++.+..+++.|.+ + +.+..+.. .
T Consensus 405 l~ASLD~a~~~m~~--~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~ 481 (714)
T PRK15400 405 IVASTETAAAMMKG--NAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDN 481 (714)
T ss_pred HHHHHHHHHHHHHh--hhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccc
Confidence 22222333333332 123 23445666777777877765 2 22210000 0
Q ss_pred -----CceeEEEEEEecCcc-----ccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 899 -----GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 899 -----~~~~~~~vv~~~~~~-----~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
+|. -+++.++++. ...|+++..+.+.|.++||.+.... ...+.+.++..+|+++++ +++++|
T Consensus 482 ~~~~lDP~--Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---~~~iLfl~s~g~t~~~~~---~L~~aL 553 (714)
T PRK15400 482 EHMYLDPI--KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---PYNLLFLFSIGIDKTKAL---SLLRAL 553 (714)
T ss_pred cccccCCc--eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHH---HHHHHH
Confidence 111 1233332211 1247889999999999999975433 367889999999999999 999999
Q ss_pred HHHHHHH
Q 001990 969 LSLTKFT 975 (985)
Q Consensus 969 ~~i~~~~ 975 (985)
.++-+..
T Consensus 554 ~~f~~~~ 560 (714)
T PRK15400 554 TDFKRAF 560 (714)
T ss_pred HHHHHhh
Confidence 9875543
No 192
>PRK07324 transaminase; Validated
Probab=99.73 E-value=9.6e-16 Score=176.28 Aligned_cols=291 Identities=14% Similarity=0.133 Sum_probs=176.7
Q ss_pred HHHHHHHHHHhC-CCcccee-cChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 635 NNLGEWLCTITG-FDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 635 ~el~~~la~l~G-~~~~~~~-~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.++++.++++++ .+...+. ++++++|+..++ +.+. .++++|+++.+.|..+...++..|++++.+|.+.+
T Consensus 65 ~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~---~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~ 136 (373)
T PRK07324 65 PEFKEAVASLYQNVKPENILQTNGATGANFLVL---YALV-----EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEE 136 (373)
T ss_pred HHHHHHHHHHhcCCChhhEEEcCChHHHHHHHH---HHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccc
Confidence 367778888774 5554444 444455543333 3221 46789999988777777777889999999998753
Q ss_pred --CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEcccccc-ccC-CCCCCc-CC
Q 001990 713 --GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNA-QVG-LTSPGY-IG 783 (985)
Q Consensus 713 --g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~-~~g-~~~~g~-~g 783 (985)
..+|+++++++++ +++++|++++| |++|.+. + +++|+++|+++|+++++|+++..- ..+ ...... ..
T Consensus 137 ~~~~~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~ 212 (373)
T PRK07324 137 NGWLPDLDELRRLVR---PNTKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYE 212 (373)
T ss_pred cCCCCCHHHHHHhCC---CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccC
Confidence 4589999999886 78999999999 5799886 5 899999999999999999987321 110 111111 11
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHh
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~l 863 (985)
-.+.+.|++|+|+. .|.++|++++++++++.+... +.. ..++.+...+ .++...+.
T Consensus 213 ~~I~~~s~SK~~~~----~G~RiG~i~~~~~li~~~~~~------------~~~--~~~~~~~~~q----~~a~~~l~-- 268 (373)
T PRK07324 213 KGISTNSMSKTYSL----PGIRVGWIAANEEVIDILRKY------------RDY--TMICAGVFDD----MLASLALE-- 268 (373)
T ss_pred CEEEEecchhhcCC----ccceeEEEecCHHHHHHHHHH------------hCc--EEecCChHHH----HHHHHHHc--
Confidence 23667788888854 478899999987766544211 000 1112111111 11222222
Q ss_pred chh-hHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCccCCC-CCC
Q 001990 864 GSK-GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTM-SWP 940 (985)
Q Consensus 864 g~~-gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~~~~~-~~p 940 (985)
..+ -+.+..+...++.+.+.+.|++...+....+.+..+ +.+.++ .+.+..+++++|. ++|+.+... .|.
T Consensus 269 ~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~--~~i~~~-----~~~~~~~~~~~ll~~~gv~v~pg~~F~ 341 (373)
T PRK07324 269 HRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVST--SFVKLD-----VDMPSEDFCLKLLKETGVLLVPGNRFD 341 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEE--EEEEeC-----CCCCHHHHHHHHHHhcCEEEECccccC
Confidence 112 233333444556677777776521221212222222 233443 1356788988875 679986432 244
Q ss_pred CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 941 VPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 941 v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.++.+||+++. +++.+. +.++.|++.++
T Consensus 342 ~~~~iRis~~~--~~~~l~---~~l~rl~~~l~ 369 (373)
T PRK07324 342 LEGHVRIGYCC--DTETLK---KGLKKLSEFLR 369 (373)
T ss_pred CCCeEEEEecC--CHHHHH---HHHHHHHHHHH
Confidence 56899999863 566666 66666666554
No 193
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.73 E-value=6.1e-16 Score=178.36 Aligned_cols=273 Identities=20% Similarity=0.164 Sum_probs=190.3
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|+++.+++. ++
T Consensus 64 ~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al-~~--~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~ 138 (386)
T PRK06767 64 KLFEERMAVLEGGEE--ALAFGSGMAAISATLIGF-LK--AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEAD 138 (386)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 347789999999865 667888888877776665 23 89999999999999888887767778998888764 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ +.++|++|++++| |++|.+.|+++|.++||++|++++|| +.++.+....|.++|+|+++.|. |.|+++ |.
T Consensus 139 l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~pl~~g~Div~~S~sK~l~g~---g~ 214 (386)
T PRK06767 139 IENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVD-NTFCSPYLQRPLELGCDAVVHSATKYIGGH---GD 214 (386)
T ss_pred HHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCcEEEecCcceecCC---CC
Confidence 655 7788999999998 68999999999999999999999995 34555555667789999999998 877632 33
Q ss_pred CceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHH
Q 001990 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (985)
Q Consensus 368 P~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 447 (985)
+-.|+++++++.+.++-. ..++.-|+. .+++ .+. +...+-+-+..+.
T Consensus 215 ~~gG~v~~~~~~i~~~~~------------------------~~~~~~g~~----~~~~---~a~--l~~~~L~tl~~r~ 261 (386)
T PRK06767 215 VVAGVTICKTRALAEKIR------------------------PMRKDIGGI----MAPF---DAW--LLLRGLKTLAVRM 261 (386)
T ss_pred ceeEEEEeChHHHHHHHH------------------------HHHHHhCCC----CCHH---HHH--HHHcCCCcHHHHH
Confidence 336899988876544200 000111110 0122 121 2334444566677
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEcCCC-----------CcceEEEecCC----HHHHHHHHHHcCceeee-----------
Q 001990 448 QRVHGLAGTFALGLKKLGTVEVQGLP-----------FFDTVKVKCAD----AHAIASAAYKIEMNLRV----------- 501 (985)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~~~~~~-----------~~~~~~i~~~~----~~~l~~~L~~~Gi~~~~----------- 501 (985)
++..+++.++++.|+++.+++.+.-| ....|+|..++ +.++.++|...++.++.
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCC
Confidence 88899999999999998557643211 12346776653 56777777665553210
Q ss_pred ----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 502 ----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 502 ----------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
+.++.+|+|++.-+.++-++.|.++|.
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 384 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALK 384 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 113679999998776666667766664
No 194
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=7.4e-16 Score=180.41 Aligned_cols=294 Identities=18% Similarity=0.231 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcE-------
Q 001990 633 MFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------- 703 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~------- 703 (985)
...++.+.|++++..+. ..++.+||++++++++..+|.|...+ .+.+||. ...+||....+....|-.
T Consensus 125 ~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~---gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 125 LRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPR---GKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccC---CCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 34567888888875322 34778999999999999988874222 2445665 568999876665433311
Q ss_pred -----EEEEeCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccc
Q 001990 704 -----IVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMN 771 (985)
Q Consensus 704 -----v~~v~~~~~g~iDle~L~~~i~~---~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~ 771 (985)
+..+|. .|.+++++++++ +++++++|+++.. +..|++.+| ++++.++|++||+++|+|++|.
T Consensus 202 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t- 275 (459)
T PRK11522 202 PLLPGFRHVPF-----GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT- 275 (459)
T ss_pred CCCCCCcccCC-----CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-
Confidence 222332 378899988863 2356788887753 467887622 9999999999999999999883
Q ss_pred cccCCCCCCcC--------CCcEEEeCCcccccccCCCC-CCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCc
Q 001990 772 AQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (985)
Q Consensus 772 ~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~G-GPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i 842 (985)
| +.+.|.+ .+|++++ .|.+ |+| -| +|.+++++++...+....+ ..
T Consensus 276 G---~GRtG~~~a~e~~gv~PDivt~--gK~l----ggG~~P-igav~~~~~i~~~~~~~~~----------------~~ 329 (459)
T PRK11522 276 G---MGRTGKMFACEHENVQPDILCL--AKAL----GGGVMP-IGATIATEEVFSVLFDNPF----------------LH 329 (459)
T ss_pred c---CCccchhhhhhccCCCCCEEEe--chhh----hCCCcc-ceeEEEcHHHHHHhccCCc----------------cc
Confidence 3 3334332 2688755 3766 333 25 4555566665543211000 01
Q ss_pred ccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--EcCCCCceeEEEEEEecCccccC
Q 001990 843 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTA 916 (985)
Q Consensus 843 ~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~-i~--~~g~~~~~~~~~vv~~~~~~~~~ 916 (985)
.+++.|++..++++.+.|..+.++++ .++..++.++|+++|++. ++ ++ ..|. +. + +-+.+..
T Consensus 330 ~~T~~gnp~~~Aaala~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~-Gl-~--~giel~~----- 397 (459)
T PRK11522 330 TTTFGGNPLACAAALATINVLLEQNL---PAQAEQKGDYLLDGFRQLAREYPDLVQEARGK-GM-L--MAIEFVD----- 397 (459)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcchH---HHHHHHHHHHHHHHHHHHHHhCCCceeeEEec-ee-E--EEEEecC-----
Confidence 12344577778888888988876654 356677888999888762 32 21 1121 11 1 2233321
Q ss_pred CCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 917 GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 917 g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
......+.+.|.++|+.+.... +-.+.+|++|+..+|++||| +++++|.++++++.+
T Consensus 398 ~~~~~~i~~~l~~~Gvl~~~~~-~~~~~lr~~Ppl~~t~~~id---~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 398 NEIGYNFASEMFRQRVLVAGTL-NNAKTIRIEPPLTLTIEQCE---QVLKAARKALAAMRV 454 (459)
T ss_pred chHHHHHHHHHHHCCeEEEecC-CCCCEEEEECCccCCHHHHH---HHHHHHHHHHHHHHH
Confidence 1125678899999999975321 12478999999999999999 999999999887654
No 195
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.72 E-value=1e-15 Score=175.60 Aligned_cols=214 Identities=22% Similarity=0.204 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch--
Q 001990 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (985)
Q Consensus 212 ~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~-- 289 (985)
...++++.+|+++|.+. +.++++|++++.++++++. . +||+|+++...|.++...++..++..|++++++|.+
T Consensus 41 ~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~-~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 115 (369)
T cd00614 41 TVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLALL-K--AGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDP 115 (369)
T ss_pred hHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHc-C--CCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCH
Confidence 34567789999999875 6788999988888777652 3 789999999999998888776677789999998764
Q ss_pred -hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001990 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (985)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~ 365 (985)
++++ +++++++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |.++++
T Consensus 116 ~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD-~t~~~~~~~~~~~~g~Divv~S~tK~l~g~--- 191 (369)
T cd00614 116 EALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVD-NTFATPYLQRPLELGADIVVHSATKYIGGH--- 191 (369)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcchhcCChhhhCCcEEEeccceeccCC---
Confidence 4555 7778999999988 78999999999999999999999994 56676766677789999999998 877632
Q ss_pred CCCceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHH
Q 001990 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (985)
Q Consensus 366 GGP~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (985)
|..-.|++.+++ ++.+++.. .++.-|+ .. +++ .+ ++...+-+.+.
T Consensus 192 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~g~-~~---~p~---~a--~~~l~~l~tl~ 237 (369)
T cd00614 192 SDVIAGVVVGSGEALIQRLRF-------------------------LRLALGT-IL---SPF---DA--WLLLRGLKTLP 237 (369)
T ss_pred CCceEEEEEeCcHHHHHHHHH-------------------------HHHhhCC-CC---CHH---HH--HHHHcCCCCHH
Confidence 223368888876 66554410 0010111 01 122 11 12344456677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE
Q 001990 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 445 ~i~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
...++..+++.+++++|+++++++
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 788889999999999999986453
No 196
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.72 E-value=9e-16 Score=177.20 Aligned_cols=289 Identities=17% Similarity=0.197 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcEE---EEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKI---VSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~v---~~v~ 708 (985)
...++.+++++..+.+. .++++||++++++++.++|.|... +..++++||+ ...+||.....+...|... .+.|
T Consensus 79 ~~~~la~~l~~~~~~~~-v~f~~SGseA~e~Aik~ar~~~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 79 PMAKLAGLLTQHSCFDK-VFFANSGAEANEGAIKLARKWGRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred HHHHHHHHHhhccCCCE-EEEeCCcHHHHHHHHHHHHHHhhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 34466777777655544 477899999999999988876432 2123455665 6688998776665544321 1111
Q ss_pred CCCC----CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCC
Q 001990 709 TDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (985)
Q Consensus 709 ~~~~----g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~~~~g 780 (985)
.... ...|+++++++++ +++++|+++... ..|.+.++ +++|.++|++||+++|+|++|. + +.+.|
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G---~GRtG 229 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G---CGRTG 229 (395)
T ss_pred CCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C---CCCCc
Confidence 1111 1258999999986 678888887543 56776522 9999999999999999999874 3 33333
Q ss_pred cC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 781 YI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 781 ~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
.+ .+|++++ .|.++ +|.| +|.+++++++..+.++.. .+++.|+++.
T Consensus 230 ~~~a~~~~gv~PDi~t~--gK~lg----~G~p-~~av~~~~~i~~~~~~~~-------------------~~T~~g~pl~ 283 (395)
T PRK03715 230 TLFAYELSGIEPDIMTL--GKGIG----GGVP-LAALLAKAEVAVFEAGDQ-------------------GGTYNGNPLM 283 (395)
T ss_pred chhhHhhcCCCCceeee--hhhhh----CCcc-eEEEEEccccccccCCCc-------------------CCCCCCCHHH
Confidence 32 3688766 38774 3335 566677777653322210 1122345666
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee-EcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~-~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
++++.+.|..+.++++ .++..++.++|+++|++. +.+. ..|. + . .+-+.+. ......+.+.+.
T Consensus 284 ~aaala~L~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~-G-l--m~~i~l~------~~~~~~~~~~~~ 350 (395)
T PRK03715 284 TAVGVAVISQLLAPGF---LEGVRARGEYLKEKLLELSEERGLEGERGE-G-L--LRALLLG------KDIGPQIVEKAR 350 (395)
T ss_pred HHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhcCCcCeEEcc-e-e--EEEEEec------CchHHHHHHHHH
Confidence 7777888888765544 456677788888888752 2221 1121 1 1 1233332 112344555555
Q ss_pred HC---CCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 929 DY---GFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 929 e~---Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+. |+.+.... ++.||++|+..+|++||| +++++|+++++++
T Consensus 351 ~~~~~Gi~~~~~~---~~~lR~~p~l~~t~~ei~---~~~~~l~~~l~~~ 394 (395)
T PRK03715 351 DMQPDGLLLNAPR---PNLLRFMPALNVTTEEID---QMIAMLRSVLDKL 394 (395)
T ss_pred hccCCCEEEeecC---CCEEEEeCCcccCHHHHH---HHHHHHHHHHHhh
Confidence 54 99875332 378999999999999999 9999999988753
No 197
>PRK05968 hypothetical protein; Provisional
Probab=99.72 E-value=4.2e-16 Score=179.69 Aligned_cols=274 Identities=18% Similarity=0.158 Sum_probs=194.7
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++|+.+|+++|.+. +.++.+|++++.++++++ +. +||+||++...|+++...+...++..|++++++|. +
T Consensus 65 ~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al-~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 139 (389)
T PRK05968 65 VRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSF-VE--PGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEE 139 (389)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHH
Confidence 4568899999999976 567788888877666654 23 89999999999999888777666778999999876 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ + ++|++|++++| |..+.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|. |.|++| |
T Consensus 140 ~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD-~a~a~~~~~~p~~~g~Divv~S~tK~l~g~---~ 214 (389)
T PRK05968 140 AVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMID-NSWASPVFQRPITLGVDLVIHSASKYLGGH---S 214 (389)
T ss_pred HHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCcchhccCchhcCCcEEEeeccccccCC---C
Confidence 4555 6 57899999998 67899999999999999999999995 34555555556789999999998 878654 3
Q ss_pred CCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 367 GP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
++..|+++.++++++++.... + ...| ..+ +++ .|++ ...+-+.+..+
T Consensus 215 ~~~gG~i~~~~~~~~~l~~~~------------~------------~~~g-~~~---~~~---~A~~--~l~~L~tl~~r 261 (389)
T PRK05968 215 DTVAGVVAGSKEHIARINAEA------------Y------------PYLG-AKL---SPF---EAWL--LLRGLRTLPLR 261 (389)
T ss_pred CeEEEEEEECHHHHHHHHHHH------------H------------HhCC-CCC---ChH---HHHH--HHcccCcHHHH
Confidence 345688988887765541000 0 0001 000 111 2222 34455567778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEcCCC------------CcceEEEecCC---HHHHHHHHHHcCceee-----e-----
Q 001990 447 AQRVHGLAGTFALGLKKLGTVEVQGLP------------FFDTVKVKCAD---AHAIASAAYKIEMNLR-----V----- 501 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~~~~~~------------~~~~~~i~~~~---~~~l~~~L~~~Gi~~~-----~----- 501 (985)
.++..+++.+++++|+++.+++.+..| +...|+|..++ +.++.++|...++.++ .
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 888889999999999988546543211 11257777653 6778888865554210 0
Q ss_pred -----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 502 -----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 -----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+.++.+|+|++..++++=|+.|.++|..
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 0146899999999988888888888864
No 198
>PRK07682 hypothetical protein; Validated
Probab=99.72 E-value=5.8e-16 Score=178.58 Aligned_cols=300 Identities=12% Similarity=0.120 Sum_probs=189.7
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--cc-ceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~--~~-~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|.+ .. .+.. ++++++...+ ++.+. .++++|+++++.|+.+...++..|.+
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~---~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 128 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA---MRAII-----NPGDEVLIVEPSFVSYAPLVTLAGGV 128 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH---HHHhC-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 577777777777777666653 22 3444 4445444333 33321 46789999998777777777889999
Q ss_pred EEEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-C-C
Q 001990 704 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G-L 776 (985)
Q Consensus 704 v~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g-~ 776 (985)
++.++.+. ++.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..... + .
T Consensus 129 ~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 205 (378)
T PRK07682 129 PVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAY 205 (378)
T ss_pred EEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCC
Confidence 99998753 46899999999987 68899999999 5799875 2589999999999999999998742111 0 0
Q ss_pred CC----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 777 TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 777 ~~----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
.. ++...-.+++.|++|+|+.| |.++|++++++++++.+.... . . ...+.+ ...
T Consensus 206 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlR~G~~~~~~~~i~~l~~~~-~-----------~--~~~~~~----~~~ 263 (378)
T PRK07682 206 TSFASIKGMRERTILISGFSKGFAMT----GWRLGFIAAPVYFSEAMLKIH-Q-----------Y--SMMCAP----TMA 263 (378)
T ss_pred CChhhcccccCCEEEEecCcccccCh----hhhhhhhhcCHHHHHHHHHHH-H-----------h--hccCCC----HHH
Confidence 00 11112357788888988543 677999999887765542110 0 0 001111 111
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~ 930 (985)
..++..++. -+...+.+..+...++++++.+.|++ ++.+ ..+++.++ +.+.++. .+.+..++++.|. ++
T Consensus 264 q~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~p~g~~~--~~~~~~~----~~~~~~~~~~~ll~~~ 334 (378)
T PRK07682 264 QFAALEALR-AGNDDVIRMRDSYRKRRNFFVTSFNEIGLTC--HVPGGAFY--AFPSISS----TGLSSEEFAEQLLLEE 334 (378)
T ss_pred HHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCeeEE--EEEeccC----CCCCHHHHHHHHHHhC
Confidence 112222332 23233455556667888889999987 4432 22222221 2233321 1356788998876 67
Q ss_pred CCccCCC-CC-C-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 931 GFHGPTM-SW-P-VPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 931 Gi~~~~~-~~-p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
||.+... .| + .++++||+++. ++++++ +.++.|++++++
T Consensus 335 gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~---~~l~~l~~~l~~ 376 (378)
T PRK07682 335 KVAVVPGSVFGESGEGFIRCSYAT--SLEQLQ---EAMKRMKRFVEN 376 (378)
T ss_pred CEEEcCchhhCcCCCCeEEEEeCC--CHHHHH---HHHHHHHHHHhh
Confidence 9987432 12 1 25789999874 688898 998888887654
No 199
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.72 E-value=2.7e-15 Score=174.41 Aligned_cols=294 Identities=16% Similarity=0.235 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhc-CC-CCCCEEEEcC-CCCCCcHHHHHhcC--------
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKAR-GD-HHRNVCIIPV-SAHGTNPATAAMCG-------- 701 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~-g~-~~~~~Vlv~~-~~Hg~~~~~~~~~G-------- 701 (985)
...++++++++++|.+. .++++||++++++++.++|.|...+ +. +++++|+..+ ++||.....+...|
T Consensus 80 ~~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYDK-VLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNF 158 (401)
T ss_pred HHHHHHHHHHhhcCCCE-EEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccccc
Confidence 45688999999998764 4778999999999999888764321 21 1345666544 56877555444322
Q ss_pred ----cEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEccccccc
Q 001990 702 ----MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 702 ----~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
..+..+|.+ |+++|+++++++++++++|+++.+ +.+|.+.+ .+++|.++|++||+++++|++|. ++
T Consensus 159 ~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~ 232 (401)
T TIGR01885 159 GPYVPGFKKIPYN-----NLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GL 232 (401)
T ss_pred CCCCCCceEeCCC-----CHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 123444443 899999999765567888887754 56788762 29999999999999999999983 43
Q ss_pred cCCCCC-----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 774 VGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 774 ~g~~~~-----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
+-.... ..+.+|+++++ |.|+ +|+..+|+++.++++.+.+.....+ . ..+ +
T Consensus 233 g~~G~~~~~~~~~~~~di~~~g--K~l~----~g~~~ig~v~~~~~i~~~~~~~~~~------------~--t~~----~ 288 (401)
T TIGR01885 233 GRTGKLLCVDHENVKPDIVLLG--KALS----GGVYPVSAVLADDDVMLTIKPGEHG------------S--TYG----G 288 (401)
T ss_pred CccchhhHHhhcCCCCCEEEee--cccc----CCCCCcEEEEEcHHHHhhccCCCCC------------C--CCC----C
Confidence 211110 12357888754 8774 4556688888888776655321100 0 111 2
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeE--cCCCCceeEEEEEEecCccccCCCCHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~--~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~ 925 (985)
++..+.++.+.|..+..+++. ++...+++++++.|++ ...+.. .+. + .+..+.++.+ ..+.+..++.+
T Consensus 289 ~p~~~~aa~a~L~~i~~~~l~---~~~~~~~~~~~~~L~~l~~~~~~~~~g~-g-~~~~i~~~~~----~~~~~~~~l~~ 359 (401)
T TIGR01885 289 NPLACAVAVAALEVLEEEKLA---ENAEKLGEIFRDQLKKLPKPIITEVRGR-G-LLNAIVIDES----KTGRTAWDLCL 359 (401)
T ss_pred CHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhccCCceeEEeec-C-eeEEEEeccC----cchhHHHHHHH
Confidence 334445556667766554443 4556678899999987 333321 121 2 2222223221 00134678999
Q ss_pred HHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 926 ~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.|.++||.+.... ++.+|++|+..+|++||| +++++|++++
T Consensus 360 ~l~~~Gv~v~~~~---~~~lRi~p~l~~t~~~i~---~~l~~l~~~l 400 (401)
T TIGR01885 360 KLKEKGLLAKPTH---GNIIRLAPPLVITEEQLD---EGLEIIKKVI 400 (401)
T ss_pred HHHhCCEEEEecC---CCEEEEeCCccCCHHHHH---HHHHHHHHHh
Confidence 9999999975322 478999999999999999 9999998764
No 200
>PRK09082 methionine aminotransferase; Validated
Probab=99.72 E-value=7.1e-16 Score=178.32 Aligned_cols=344 Identities=12% Similarity=0.146 Sum_probs=208.0
Q ss_pred HHHHHHHHhcCccCcCcccccccceecccCccccccccccccc-cccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCc--
Q 001990 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (985)
Q Consensus 573 ~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f-~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~-- 649 (985)
+++.+..+.+++ .++.|+.+.+.++............. ...+.|.+ .+|..++.+.+++++.+++|.+.
T Consensus 19 ~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~ 90 (386)
T PRK09082 19 IFTVMSALAAEH-----GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPP---MTGVAALREAIAAKTARLYGRQYDA 90 (386)
T ss_pred HHHHHHHHHhhC-----CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 555565555432 35778776665543332222111101 01223333 36888888889999998888753
Q ss_pred -cceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHHHHh
Q 001990 650 -FSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (985)
Q Consensus 650 -~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-~g~iDle~L~~~i~~ 726 (985)
..+.. ++++++...+ ++.+. .++++|+++.+.|+.+...++..|.+++.++.+. ++.+|+++++++++
T Consensus 91 ~~~i~~t~G~~~al~~~---~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~- 161 (386)
T PRK09082 91 DSEITVTAGATEALFAA---ILALV-----RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161 (386)
T ss_pred CCcEEEeCCHHHHHHHH---HHHHc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-
Confidence 13444 4445554333 33321 4678999999988877777888999999999864 57899999999997
Q ss_pred cCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-C--CCC----CCcCCCcEEEeCCccccc
Q 001990 727 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G--LTS----PGYIGADVCHLNLHKTFC 796 (985)
Q Consensus 727 ~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g--~~~----~g~~g~Di~~~s~hKtl~ 796 (985)
+++++|++++| |++|.+- .++++|.++|+++|+++++|.++..... + ... ++..+-.+++.|++|.|+
T Consensus 162 --~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 162 --PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH 239 (386)
T ss_pred --ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc
Confidence 78899999988 6799762 2699999999999999999998742111 1 111 111223477788888885
Q ss_pred ccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHH
Q 001990 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (985)
Q Consensus 797 ~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~ 876 (985)
. .|.++|+++++++++..+.... .....+.+...+ .++..++.. .++-+++..+...
T Consensus 240 ~----~G~RiG~iv~~~~l~~~~~~~~--------------~~~~~~~~~~~q----~~~~~~l~~-~~~~~~~~~~~~~ 296 (386)
T PRK09082 240 V----TGWKVGYCVAPAALSAEFRKVH--------------QYNTFTVNTPAQ----LALADYLRA-EPEHYLELPAFYQ 296 (386)
T ss_pred c----hhhhhhhhhCCHHHHHHHHHHH--------------hhhcCCCChHHH----HHHHHHHhC-ChHHHHHHHHHHH
Confidence 4 4778999999877664432100 000011111111 112233321 3344455555667
Q ss_pred HHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH-HHCCCccCCCC-C---C-CCCEEEEec
Q 001990 877 LNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGPTMS-W---P-VPGTLMIEP 949 (985)
Q Consensus 877 ~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L-~e~Gi~~~~~~-~---p-v~~~lris~ 949 (985)
++.+++.+.|++ ++++. .+.+.++ +.++++.+ .+.+..++++.| .++|+.+.... | + ..+.+|+++
T Consensus 297 ~~~~~~~~~L~~~~~~~~--~~~g~~~--~~~~~~~~---~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~ 369 (386)
T PRK09082 297 AKRDRFRAALANSRFKLL--PCEGTYF--QLVDYSAI---SDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF 369 (386)
T ss_pred HHHHHHHHHHHhCCCccc--CCCeeEE--EEEecccc---CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe
Confidence 778888898886 44332 1222221 23454311 145678899986 57799864322 2 2 236899998
Q ss_pred cCCCCHHhhchHHHHHHHHHH
Q 001990 950 TESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 950 t~~~t~eeId~~~~~i~aL~~ 970 (985)
+. ++++++ +.++.|++
T Consensus 370 ~~--~~~~l~---~~~~rl~~ 385 (386)
T PRK09082 370 AK--QEETLD---AAAERLCQ 385 (386)
T ss_pred cC--CHHHHH---HHHHHHhh
Confidence 74 677777 77666653
No 201
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=1.3e-15 Score=178.39 Aligned_cols=305 Identities=14% Similarity=0.129 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|+++++.+ ...++.+||+++++++++.+|.|...+|.+++.+||. ...+||....+....|-
T Consensus 99 ~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~ 178 (453)
T PRK06943 99 AIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDP 178 (453)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhccccc
Confidence 447888888888643 2357789999999999999888765555445667775 66899977544332221
Q ss_pred ---EEEEEeCCCC-C-----------CCCHHHHHHHHHhcCCCeEEEEEEc-C-CCcccccc---CHHHHHHHHHHcCCE
Q 001990 703 ---KIVSVGTDAK-G-----------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQ 762 (985)
Q Consensus 703 ---~v~~v~~~~~-g-----------~iDle~L~~~i~~~~~~t~~Vvi~~-p-n~~G~i~~---di~eI~~la~~~g~l 762 (985)
.+..+|.... + .-|++++++.++++.+++++|+++- . ...|++.+ -++++.++|++||++
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gil 258 (453)
T PRK06943 179 LIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVH 258 (453)
T ss_pred CCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1333443211 1 1246788888876667899999875 2 34666653 399999999999999
Q ss_pred EEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCC
Q 001990 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (985)
Q Consensus 763 liVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~ 834 (985)
+|+|+++ .|+.+.|.+ .+|++++ .|.++ +|--.+|.+.+++++.+.+..... .
T Consensus 259 lI~DEV~----TG~GRtG~~fa~~~~gv~PDivt~--gKgl~----gG~~Pi~av~~~~ei~~~~~~~~~--~------- 319 (453)
T PRK06943 259 LIADEIA----VGCGRTGTFFACEQAGVWPDFLCL--SKGIS----GGYLPLSLVLSRDAIFAAFYDDDV--T------- 319 (453)
T ss_pred EEeechh----hCCCCCcchhHHHhCCCCCCeEee--ehhhc----cCcccceEEEEcHHHHHhhcccCc--c-------
Confidence 9999886 344445432 3799876 37763 331236677778777654421000 0
Q ss_pred CCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CC-ee-EcCCCCceeEEEEEEec
Q 001990 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YP-IL-FRGVNGTVAHEFIVDLR 910 (985)
Q Consensus 835 ~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~-i~-~~g~~~~~~~~~vv~~~ 910 (985)
.. ....+++.|+++.++++.+.|..+.++++. ++..+..++|.++|++. .. +. ..|. +. + +.+.+.
T Consensus 320 --~~-~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~---~~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl-~--~gvel~ 389 (453)
T PRK06943 320 --RG-FLHSHSYTGNPLACRAALATLDLFAEDDVL---ARNARKSARLRAALAPLAAHPQVRHLRQR-GT-I--FAFDVA 389 (453)
T ss_pred --CC-ccCCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHhcCCCEEeEecc-cc-E--EEEEEc
Confidence 00 001123456777888888999888776654 45556678888888652 11 11 1121 11 1 222321
Q ss_pred CccccCCC-CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 911 GLKNTAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 911 ~~~~~~g~-~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
. ...... ....+.+.+.++|+++... .+.+|++|...+|++||| +++++|.+.++++
T Consensus 390 ~-~~~~~~~~~~~i~~~~~~~Gll~~~~----g~~l~~~Ppl~it~~eid---~~~~~l~~al~~~ 447 (453)
T PRK06943 390 L-DGDAARTFSRRFFEAALERELLLRPI----GTTVYLMPPYVLDDDEIA---WLAERTRATLDAT 447 (453)
T ss_pred c-CCCcchHHHHHHHHHHHHCCcEEEec----CCEEEEeCCCcCCHHHHH---HHHHHHHHHHHHH
Confidence 0 000011 1356788889999987432 367999999999999999 9999999988765
No 202
>PLN00175 aminotransferase family protein; Provisional
Probab=99.72 E-value=1.6e-15 Score=176.76 Aligned_cols=345 Identities=17% Similarity=0.153 Sum_probs=207.8
Q ss_pred HHHHHHHhcCccCcCcccccccceecccCcccccccccccccc-ccCCCCcchhhhcHHHHHHHHHHHHHHHhCCC--cc
Q 001990 574 LRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF 650 (985)
Q Consensus 574 ~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~-~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~--~~ 650 (985)
++.+.+++.. .+++.|+.|.+.++.............. ..+.|.+ .+|..++.+.+.+++.+.+|.+ ..
T Consensus 44 ~~~~~~~~~~-----~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~ 115 (413)
T PLN00175 44 FTQMSSLAIK-----HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYAR---GFGVPELNSAIAERFKKDTGLVVDPE 115 (413)
T ss_pred HHHHHHHhhc-----CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCC---CCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence 3445544432 2467888877766544322221000000 1123333 3577777777777777766753 33
Q ss_pred -ceecChHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHHHHhc
Q 001990 651 -SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEAN 727 (985)
Q Consensus 651 -~~~~~sGa-~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-~g~iDle~L~~~i~~~ 727 (985)
.+..++|+ +|.... ++.+. .++|+|+++++.|..+...++..|.+++.++.++ ++.+|+++|+++++
T Consensus 116 ~~I~vt~G~~~al~~~---~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-- 185 (413)
T PLN00175 116 KEVTVTSGCTEAIAAT---ILGLI-----NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-- 185 (413)
T ss_pred CCEEEeCCHHHHHHHH---HHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC--
Confidence 35555554 444222 32221 4778999999888777777889999999999864 47899999999997
Q ss_pred CCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-C----CC-CCCcCCCcEEEeCCccccccc
Q 001990 728 RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G----LT-SPGYIGADVCHLNLHKTFCIP 798 (985)
Q Consensus 728 ~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g----~~-~~g~~g~Di~~~s~hKtl~~p 798 (985)
+++++|++++| |++|.+. .++++|+++|+++|+++++|+++..... + +. .++..+-.+++.|+.|+|+.|
T Consensus 186 -~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 186 -SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred -cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 68899999999 5799985 2588999999999999999998742211 1 00 011122346778888988644
Q ss_pred CCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHH
Q 001990 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (985)
Q Consensus 799 ~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~ 878 (985)
|.++|+++++++++..+.... .....+.+...+ .++..+|. -++.-+.+..+...++
T Consensus 265 ----G~RiG~~v~~~~l~~~l~~~~--------------~~~~~~~s~~~Q----~a~~~~l~-~~~~~~~~~~~~~~~~ 321 (413)
T PLN00175 265 ----GWKIGWAIAPPHLTWGVRQAH--------------SFLTFATATPMQ----WAAVAALR-APESYYEELKRDYSAK 321 (413)
T ss_pred ----chheeeeEeCHHHHHHHHHHH--------------hhccCCCCHHHH----HHHHHHHh-CCHHHHHHHHHHHHHH
Confidence 788999999887665432100 000111111111 11222332 1223345556667778
Q ss_pred HHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCC-CHHHHHHHHH-HCCCccCCC-CC-----CCCCEEEEec
Q 001990 879 ANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM-DYGFHGPTM-SW-----PVPGTLMIEP 949 (985)
Q Consensus 879 a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~-~~~~l~~~L~-e~Gi~~~~~-~~-----pv~~~lris~ 949 (985)
++++.+.|++ ++.+ ..+.+.++ +.+++.. .+. +..++++.|. ++||.+.+. .| +..+.+|+++
T Consensus 322 ~~~l~~~L~~~g~~~--~~p~g~~f--~~~~~~~----~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~ 393 (413)
T PLN00175 322 KDILVEGLKEVGFKV--YPSSGTYF--VMVDHTP----FGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF 393 (413)
T ss_pred HHHHHHHHHHCCCee--cCCCeeEE--EEEeccc----cCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE
Confidence 8889999987 4443 22222222 3344421 133 4678888886 569976321 12 1246899999
Q ss_pred cCCCCHHhhchHHHHHHHHHHHHH
Q 001990 950 TESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 950 t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+ .++++++ ..++.|++.++
T Consensus 394 ~--~~~e~l~---~~~~rL~~~~~ 412 (413)
T PLN00175 394 C--KDEETLR---AAVERMKTKLK 412 (413)
T ss_pred c--CCHHHHH---HHHHHHHHHHh
Confidence 7 3688888 88887776553
No 203
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.72 E-value=1.6e-15 Score=176.11 Aligned_cols=295 Identities=13% Similarity=0.125 Sum_probs=185.9
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cc-cceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DS-FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~-~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+..|. +. ..+..++|++ +. .++++.+. .++++|+++++.|..+...++..|++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al---~~~~~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~~ 140 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL---VHLPMVYA-----NPGDIILVPDPGYTAYETGIQMAGAT 140 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH---HHHHHHhC-----CCCCEEEECCCCccchHHHHHhcCCE
Confidence 57666666666666665564 44 4565555554 33 22233221 46789999999888887778899999
Q ss_pred EEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEcccccccc-C--
Q 001990 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV-G-- 775 (985)
Q Consensus 704 v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~~-g-- 775 (985)
++.+|.+++ ..+|++++++++. +++++|++++| |++|.+.+ .+++|+++|+++|+++++|+++..-.. +
T Consensus 141 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~ 217 (399)
T PRK07681 141 SYYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNK 217 (399)
T ss_pred EEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCC
Confidence 999999754 3679999999886 68899999998 68999862 388899999999999999998742111 1
Q ss_pred CCC----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 776 LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 776 ~~~----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
... .+...-.+++.|++|+|+. .|.++|++++++++.+.+.... .....+.+ ..
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~~~----~GlRiG~~i~~~~l~~~~~~~~--------------~~~~~~~s----~~ 275 (399)
T PRK07681 218 PISFLSVPGAKEVGVEINSLSKSYSL----AGSRIGYMIGNEEIVRALTQFK--------------SNTDYGVF----LP 275 (399)
T ss_pred CCChhhCCCCcccEEEEeecccccCC----ccceeEEEecCHHHHHHHHHHH--------------hhcccCCC----HH
Confidence 000 0111234677788898854 3678999998877665432100 00001111 11
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH-
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD- 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e- 929 (985)
.-.++..++. -+.+-+.+..+...++.+++.+.|++ ++.+. .+.+.. .+.++++ .+.+..++++.|.+
T Consensus 276 ~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~p~~g~--f~~~~l~-----~~~~~~~~~~~l~~~ 345 (399)
T PRK07681 276 IQKAACAALR-NGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD--KPAGSM--FVWAEIP-----KGWTSLSFAYALMDR 345 (399)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeee--EEEEECC-----CCCCHHHHHHHHHHh
Confidence 1111222222 12233444445556777888888887 44332 121222 2344553 24567889998877
Q ss_pred CCCccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 930 YGFHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 930 ~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
+||.+... .|. .++.+|+++. .++++++ ++++.|++
T Consensus 346 ~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~---~~l~~l~~ 384 (399)
T PRK07681 346 ANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQ---QAVENIRN 384 (399)
T ss_pred CCEEEeCChhhCcCCCCeEEEEec--CCHHHHH---HHHHHHHH
Confidence 89986432 122 2478999997 4688999 99988887
No 204
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=5.2e-16 Score=177.27 Aligned_cols=283 Identities=14% Similarity=0.156 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~ 714 (985)
.++++.+|++++.+...+..++|++. +..++++.+. .++|+|+++++.|..+...++..|++++.+|.++++.
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 135 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDE--VLAHAFLAFF-----NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFS 135 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 47889999999988766666555541 2233343332 4678999999877666666788999999999987888
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc-CCEEEEEccccccccCCCC---CCcCCCcEEEe
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTS---PGYIGADVCHL 789 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~-g~lliVD~a~~~~~~g~~~---~g~~g~Di~~~ 789 (985)
+|++++++ ++++|++++| |++|.+. +.+++.++++.+ |+++++|+++.. +.+-.. .....-.+++.
T Consensus 136 ~d~~~l~~-------~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~ 206 (353)
T PRK05387 136 IDVEDYLR-------PNGGIIFPNPNAPTGIAL-PLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQ 206 (353)
T ss_pred CCHHHHHh-------cCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEE
Confidence 99998863 2457888999 5799998 789999999876 999999998742 221100 01123357888
Q ss_pred CCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHH
Q 001990 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (985)
Q Consensus 790 s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~ 869 (985)
|++|+|+.| |.++|++++++++.+.+.... ......+.+..++ .++..++. ..+.+.
T Consensus 207 S~SK~~~~~----GlR~G~~~~~~~~~~~l~~~~-------------~~~~~~~~~~~~q----~~~~~~l~--~~~~~~ 263 (353)
T PRK05387 207 TFSKSRSLA----GLRVGFAIGHPELIEALNRVK-------------NSFNSYPLDRLAQ----AGAIAAIE--DEAYFE 263 (353)
T ss_pred ehhHhhcch----hhhceeeecCHHHHHHHHHhh-------------ccCCCCCcCHHHH----HHHHHHhc--CHHHHH
Confidence 888988643 778999998877665432100 0000111111111 11112222 123345
Q ss_pred HHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCC-CCCEEEE
Q 001990 870 EASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGTLMI 947 (985)
Q Consensus 870 ~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~p-v~~~lri 947 (985)
+..++..++++++.+.|++ ++.+ .++.+. .+.+.++ +.+..++.+.|.++||.+.....+ ..+.+|+
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~---~~~~~~~------~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 332 (353)
T PRK05387 264 ETRAKVIATRERLVEELEALGFEV--LPSKAN---FVFARHP------SHDAAELAAKLRERGIIVRHFNKPRIDQFLRI 332 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeE--CCCcCc---EEEEECC------CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEE
Confidence 5566677778889999987 4432 222121 1234432 357789999999999987533222 3478999
Q ss_pred eccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 948 EPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 948 s~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+++ +.++++ +++++|++++.
T Consensus 333 s~~---~~~~~~---~~~~~L~~~~~ 352 (353)
T PRK05387 333 TIG---TDEEME---ALVDALKEILA 352 (353)
T ss_pred EeC---CHHHHH---HHHHHHHHHhh
Confidence 985 679999 99999988753
No 205
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.72 E-value=2e-15 Score=174.84 Aligned_cols=294 Identities=17% Similarity=0.154 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcEEEE---Ee
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---VG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~v~~---v~ 708 (985)
...+++++|+++++.+. .++++||++|+++++.++|.|...+|..++++||+ ...+||.........+..... .|
T Consensus 74 ~~~~la~~l~~~~~~~~-v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 152 (389)
T PRK01278 74 EQERLAERLVENSFADK-VFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGP 152 (389)
T ss_pred HHHHHHHHHHhhCCCCE-EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCC
Confidence 35578889999886654 47788999999999999988765555434557776 446788776665443332111 01
Q ss_pred CCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEEccccccccCCCC--
Q 001990 709 TDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-- 778 (985)
Q Consensus 709 ~~~~g----~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~---~di~eI~~la~~~g~lliVD~a~~~~~~g~~~-- 778 (985)
..++. ..|+++++++++ +++++|+++.++ +.|.+. .++++|+++|++||+++|+|++|. +++-...
T Consensus 153 ~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~ 228 (389)
T PRK01278 153 LVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLF 228 (389)
T ss_pred CCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcce
Confidence 11111 258999999997 689999988554 466332 269999999999999999999984 2211010
Q ss_pred C-C--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHH
Q 001990 779 P-G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 779 ~-g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
+ . ...+|++++ .|.++ +|..+|++++++++.+.+..... .. ..+ +++..+++
T Consensus 229 ~~~~~~~~pdi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~~------------~~--t~~----~~~~~~aa 283 (389)
T PRK01278 229 AHEWAGVTPDIMAV--AKGIG-----GGFPLGACLATEEAAKGMTPGTH------------GS--TYG----GNPLAMAV 283 (389)
T ss_pred eecccCCCCCEEEE--ehhcc-----CCcceEEEEEcHHHHhccCCCCC------------CC--CCC----ccHHHHHH
Confidence 0 0 123576544 57774 45678889888877665432110 01 111 23344455
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CC-eeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~-i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
+.+.|..+..+++ .++..++.++++++|++. .. +......... .+.+.+. .+..++.+.|.++|
T Consensus 284 a~a~l~~l~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~--~~~i~~~-------~~~~~~~~~l~~~G 351 (389)
T PRK01278 284 GNAVLDVILAPGF---LDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGL--LLGLKCV-------VPNRDLVQALRDEG 351 (389)
T ss_pred HHHHHHHHhhhHH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEecccE--EEEEEEe-------cCHHHHHHHHHHCC
Confidence 5566666543333 234555666777777641 21 2110000011 1223332 25678999999999
Q ss_pred CccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 932 FHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 932 i~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
|.+.... .+.+|++|+..+|++||+ ++++.|++++++
T Consensus 352 V~~~p~~---~~~lR~~p~~~~~~~~i~---~~l~~l~~~l~~ 388 (389)
T PRK01278 352 LLTVGAG---DNVVRLLPPLIITEEEID---EALERLERAAES 388 (389)
T ss_pred eEEeecC---CCEEEEeCCcccCHHHHH---HHHHHHHHHHHh
Confidence 9864222 378999999889999999 999999887653
No 206
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=9e-16 Score=176.90 Aligned_cols=286 Identities=14% Similarity=0.106 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.+++++|++..++.+++|++. +..++++.+. .++++|+++++.++.+...++..|++++.++.++++
T Consensus 88 ~~~lr~~ia~~~~~~~~~I~~t~Ga~~--~i~~~~~~~~-----~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~ 160 (380)
T PLN03026 88 SRRLRAALAEDSGLESENILVGCGADE--LIDLLMRCVL-----DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDF 160 (380)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 347889999999988766666666542 2223333321 367899999886665656677899999999987778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC----CcCCCcEEE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCH 788 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~----g~~g~Di~~ 788 (985)
.+|+++|+++++ .+++++|++++| |++|.+. +.+++.++++.. +++++|+++.. +...... ....-.+++
T Consensus 161 ~~d~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~-~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~ 235 (380)
T PLN03026 161 SLDVPRIVEAVE--THKPKLLFLTSPNNPDGSII-SDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVL 235 (380)
T ss_pred CcCHHHHHHHHh--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEE
Confidence 899999999983 168899999999 5799998 899999999864 89999999742 1110000 112234677
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|++|.|++ .|.++|++++++++++.+.... ...+++. ....++.+.+.. .+-+
T Consensus 236 ~SfSK~~gl----aGlRiGy~~~~~~~i~~l~~~~--------------~~~~~~~------~~q~aa~~aL~~--~~~~ 289 (380)
T PLN03026 236 RTFSKRAGL----AGLRVGYGAFPLSIIEYLWRAK--------------QPYNVSV------AAEVAACAALSN--PKYL 289 (380)
T ss_pred ecchHhhcC----ccccceeeecCHHHHHHHHHhc--------------CCCCCCH------HHHHHHHHHhhC--HHHH
Confidence 888888754 5789999999877665432100 0011111 111112222321 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CCCCCEEEE
Q 001990 869 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLMI 947 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~pv~~~lri 947 (985)
++..+...++.+++.+.|++.-.+....+ +. +.+.++++ .+.+..++.+.|.++||.+.... ...++.+||
T Consensus 290 ~~~~~~~~~~r~~l~~~L~~~~~~~~~p~-~~--~f~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRi 361 (380)
T PLN03026 290 EDVKNALVEERERLFGLLKEVPFLEPYPS-DA--NFILCRVT-----SGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRV 361 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeECCC-CC--eEEEEECC-----CCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEE
Confidence 44555667777888888886211111111 11 22344543 13567889999999999875332 223578999
Q ss_pred eccCCCCHHhhchHHHHHHHHHHH
Q 001990 948 EPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 948 s~t~~~t~eeId~~~~~i~aL~~i 971 (985)
|+. +.+|++ +|+++|+++
T Consensus 362 s~~---~~~~~~---~l~~al~~~ 379 (380)
T PLN03026 362 SVG---KPEHTD---ALMEALKQL 379 (380)
T ss_pred ecC---CHHHHH---HHHHHHHHh
Confidence 985 788999 999998764
No 207
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.72 E-value=1.1e-15 Score=175.43 Aligned_cols=272 Identities=18% Similarity=0.177 Sum_probs=189.6
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|+++|.+. +.++.+|++++.+++. + +. +||+||+++..|+++...|+..++..|++++++|. +
T Consensus 49 ~~~le~~la~l~g~~~--~l~~~sG~~al~~~l~-l-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~ 122 (378)
T TIGR01329 49 RTALESLLAKLDKADR--AFAFSSGMAALDVITR-L-LN--NGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLD 122 (378)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-H-hC--CCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 4568899999999854 6678888887765443 2 23 89999999999999988887777778999999976 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |++++|.+
T Consensus 123 ~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD-~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~-- 199 (378)
T TIGR01329 123 KVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVD-NTMMSPLLCNPLELGADIVYHSATKFLAGHSD-- 199 (378)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCcEEEEecceeccCCcc--
Confidence 5665 7889999999998 78999999999999999999999995 34555655667789999999999 77764421
Q ss_pred CCceEEEEEchh-hHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~~~~-~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
.-.|+++++++ +.+++.. .++..|+ +. ++. .+ |+...+.+-+..
T Consensus 200 -~~~G~v~~~~~~~~~~~~~-------------------------~~~~~G~---~~-~~~---~a--~l~~~~l~tl~~ 244 (378)
T TIGR01329 200 -VMAGVLAVKGEEIAKKVYF-------------------------LQNSTGS---GL-APF---DC--WLLLRGIKTLAI 244 (378)
T ss_pred -ceeEEEEeCcHHHHHHHHH-------------------------HHHhcCC---cC-CHH---HH--HHHHccCCCHHH
Confidence 22688888653 3333310 0110110 00 111 11 334566677888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC---HHHHHHHHHHcCceeee----
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD---AHAIASAAYKIEMNLRV---- 501 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~---- 501 (985)
+.++..+++..+++.|++...++ +. +. | +...|+|.+.+ +.++.+.|...+|.++.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~ 324 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCC
Confidence 88999999999999999874342 22 11 1 11257777754 66888888655553210
Q ss_pred -----------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 502 -----------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 502 -----------------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
+.++.+|+|++.-+.++-|+.|.++|.
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 374 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFV 374 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 113678999888766666666666665
No 208
>PRK09105 putative aminotransferase; Provisional
Probab=99.72 E-value=1e-15 Score=175.83 Aligned_cols=281 Identities=14% Similarity=0.115 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.+++.+|.+..++..+.|++. +..++++.+. .++++|+++++.|..+...++..|++++.+|.++++
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~--ai~~~~~~l~-----~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSE--PLNYAVLAFT-----SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHH--HHHHHHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCC
Confidence 457888899999998776666555541 2233333332 367899999998877777788999999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEccccccccCCCCCC---cCCCcEE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGADVC 787 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~~g~~~~g---~~g~Di~ 787 (985)
.+|++++++. . +++++|++++| |++|.+. +.++|.++++. +|+++++|+++.. ........ ..+.+++
T Consensus 153 ~~d~~~l~~~-~---~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 153 AHDVKAMLAA-D---PNAGLIYICNPNNPTGTVT-PRADIEWLLANKPAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCHHHHHhc-C---CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCCCCcEEEEECchHH-hccCcchHHHHhhCCCEE
Confidence 8999999876 3 56888999999 5799997 67777777653 4899999999731 21111111 1234544
Q ss_pred -EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 -HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 -~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+.|++|+|+. .|.++|++++++++++.+... + ..+.+ . ....++.+++. .++
T Consensus 227 ~~~SfSK~~g~----~GlRiG~~v~~~~~i~~l~~~--~-------------~~~~~-----~-~~~~aa~~~L~--~~~ 279 (370)
T PRK09105 227 VLRTFSKLYGM----AGMRLGLAAARPDLLAKLARF--G-------------HNPLP-----V-PAAAAGLASLR--DPK 279 (370)
T ss_pred EEecccHhhcC----CccceeeeecCHHHHHHHHhc--C-------------CCCcC-----H-HHHHHHHHHHh--CHH
Confidence 5577787754 477899999987766544211 0 01111 1 11112222232 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEE
Q 001990 867 GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~l 945 (985)
-+.+..++..++.+++.+.|++ ++.+. .+++. .+.++++ .+..++.+.|.++||.++......++++
T Consensus 280 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~~---f~~~~~~-------~~~~~l~~~L~~~gI~v~~~~~~~~~~~ 347 (370)
T PRK09105 280 LVPQRRAENAAVREDTIAWLKKKGYKCT--PSQAN---CFMVDVK-------RPAKAVADAMAKQGVFIGRSWPIWPNWV 347 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcC--CCCCc---EEEEeCC-------CCHHHHHHHHHHCCcEEecCCCCCCCeE
Confidence 2344445666777888888887 44432 22222 2334442 3678899999999998843211235899
Q ss_pred EEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 946 MIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 946 ris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
|+++. ++++++ +|+++|+++.
T Consensus 348 Ris~~---~~~~~~---~l~~al~~~~ 368 (370)
T PRK09105 348 RVTVG---SEEEMA---AFRSAFAKVM 368 (370)
T ss_pred EEEcC---CHHHHH---HHHHHHHHHh
Confidence 99985 688999 9999998765
No 209
>PLN02822 serine palmitoyltransferase
Probab=99.72 E-value=1.2e-15 Score=180.28 Aligned_cols=281 Identities=12% Similarity=0.089 Sum_probs=185.5
Q ss_pred hhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCe
Q 001990 202 QAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI 281 (985)
Q Consensus 202 ~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi 281 (985)
.|+..-|+.+.+.++++.+|+++|.+. ..+|.+|.+++.+++.++. +++|.|+++...|.++...++. .+.
T Consensus 145 g~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~a~~sai~a~~---~~gd~Ii~d~~~H~s~~~~~~l----s~~ 215 (481)
T PLN02822 145 GPRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLSTIFSVIPAFC---KKGDIIVADEGVHWGIQNGLYL----SRS 215 (481)
T ss_pred ccCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHhC---CCCCEEEEeCCccHHHHHHHHH----cCC
Confidence 344455778889999999999999764 4566666556666665542 3789999999999998777643 245
Q ss_pred EEEEeCc---hhhhc-c---C------CCE-eEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-
Q 001990 282 KVVVSDL---KDIDY-K---S------GDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG- 345 (985)
Q Consensus 282 ~v~~~~~---~~l~~-l---~------~~t-~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~- 345 (985)
++++++. ++++. + . +++ ++|++..+ +++|.+.|+++|.++|+++|+++++| +.+++|++...+
T Consensus 216 ~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvD-Ea~s~gvlG~~G~ 294 (481)
T PLN02822 216 TIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLD-ESNSFGVLGKSGR 294 (481)
T ss_pred eEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEE-CCccccccCCCCC
Confidence 6666643 33332 1 1 335 56666655 67999999999999999999999994 566777664332
Q ss_pred ----cc-----cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccc
Q 001990 346 ----EL-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK 415 (985)
Q Consensus 346 ----~~-----GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~ 415 (985)
.+ ..||++++. |+|+. .| ||++.++++++.+.. ...+|.+
T Consensus 295 G~~e~~~v~~~~~dii~~s~sKalg~---~G----G~i~g~~~ii~~~~~----------~~~~~~f------------- 344 (481)
T PLN02822 295 GLSEHFGVPIEKIDIITAAMGHALAT---EG----GFCTGSARVVDHQRL----------SSSGYVF------------- 344 (481)
T ss_pred ChHHHcCCCCCCCeEEEecchhhhhh---CC----eEEEcCHHHHHHHHh----------cCCceee-------------
Confidence 12 468999986 99863 12 788888887765410 0011111
Q ss_pred cCCCccchhHHHHHHHHH-HHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCcceEEEecC------C--
Q 001990 416 ATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA------D-- 484 (985)
Q Consensus 416 atsni~t~~~l~a~~aa~-y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~~~~~i~~~------~-- 484 (985)
+++.+.+...|++ .+..+ .+ .+++.++..++.+++++.|+++.|+++... .++-.+.+... +
T Consensus 345 -----sa~lPp~~~~Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~ 417 (481)
T PLN02822 345 -----SASLPPYLASAAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLS 417 (481)
T ss_pred -----ccccCHHHHHHHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHH
Confidence 1111111222222 12222 12 256788899999999999998723776532 22222333211 1
Q ss_pred -HHHHHHHHH-HcCceeeee---------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 485 -AHAIASAAY-KIEMNLRVV---------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 485 -~~~l~~~L~-~~Gi~~~~~---------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..+++++|. ++||.+... .+..+|++++..+|++||++++++|+.
T Consensus 418 ~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 418 LLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred HHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367899987 789987532 124699999999999999999999974
No 210
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.71 E-value=9.3e-16 Score=175.37 Aligned_cols=297 Identities=15% Similarity=0.121 Sum_probs=193.1
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCC---
Q 001990 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK--- 256 (985)
Q Consensus 180 ~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~--- 256 (985)
.|+.+.+++.+. +..|++ .-+.+.++++.+|+++|.+. +.+++|+|+++..+++++ .. +||
T Consensus 25 ~~~~v~~a~~~~---~~~~~~--------~~~~~~~~~~~~a~~~g~~~--~~~~~g~t~al~~al~al-~~--~Gd~~~ 88 (363)
T TIGR01437 25 VSDEVADAQKRG---AQNYFE--------IKELVNKTGEYIANLLGVED--AVIVSSASAGIAQSVAAV-IT--RGNRYL 88 (363)
T ss_pred CCHHHHHHHHHH---HhcCCC--------HHHHHHHHHHHHHHhhCCCe--EEEEcCHHHHHHHHHHHH-hc--CCCcch
Confidence 677766565542 222321 23556788999999999874 678899999988888775 23 555
Q ss_pred ------------EEEEcCCCChhHHHHHHHhhcCCCeEEEEeC------chhhhc-cCCCEeEEE-EEc-CCCCeeeccH
Q 001990 257 ------------TFIIASNCHPQTIDICITRADGFDIKVVVSD------LKDIDY-KSGDVCGVL-VQY-PGTEGEVLDY 315 (985)
Q Consensus 257 ------------~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~------~~~l~~-l~~~t~~V~-v~~-pn~~G~i~dl 315 (985)
+||++...++.+...+.......|.++++++ ++++++ ++++|++++ +++ +|++|.+.|+
T Consensus 89 ~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~ 168 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSV 168 (363)
T ss_pred hhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCH
Confidence 7887763333332122222334688888764 467777 888999876 565 4789999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecC
Q 001990 316 GDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 394 (985)
Q Consensus 316 ~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~ 394 (985)
++|+++||++|+++++|+ ..+.. +....++|+|++++|+ |+|+ ||-.|+++.++++++.+.....|
T Consensus 169 ~~i~~~a~~~gi~vivD~-a~~~~-~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~----- 235 (363)
T TIGR01437 169 EDAAQVAQEHNLPLIVDA-AAEED-LQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKG----- 235 (363)
T ss_pred HHHHHHHHHcCCeEEEEC-CCCCc-hHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCC-----
Confidence 999999999999999953 22321 1223467999999999 7664 44568888888777665321111
Q ss_pred CCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--C
Q 001990 395 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--L 472 (985)
Q Consensus 395 ~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~ 472 (985)
..+. .+.+| ..+.++.+++ .++...|.+.+.++. +++.+++++|++++|+++.. +
T Consensus 236 -~~~~-------------~~~~~------~~~~gl~aAl--~~~~~~~~~~~~~~~-~~~~~l~~~L~~i~g~~~~~~~~ 292 (363)
T TIGR01437 236 -IGRA-------------MKVGK------ENILGLTAAL--EQYLSTGKESGAEMV-AKLTPFIEALNTLKGVSASIVQD 292 (363)
T ss_pred -Ccce-------------eccCH------HHHHHHHHHH--HHHHccCcccHHHHH-HHHHHHHHHHhcCCCeEEEEecC
Confidence 0000 11222 2244555555 333334444444444 35668999999985588762 1
Q ss_pred -C--Ccc--eEEEecC--C--HHHHHHHHHHcC--ceeeee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 473 -P--FFD--TVKVKCA--D--AHAIASAAYKIE--MNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 473 -~--~~~--~~~i~~~--~--~~~l~~~L~~~G--i~~~~~--~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. .++ .++|+.. + ..++.++|.++| |..+.. ..+.+++++.. ++++|++.++++|..
T Consensus 293 ~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 293 EAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIRE 361 (363)
T ss_pred CCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHH
Confidence 1 112 3555542 3 899999999877 555542 46889999986 559999999999964
No 211
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.71 E-value=3.8e-15 Score=169.10 Aligned_cols=305 Identities=17% Similarity=0.167 Sum_probs=196.3
Q ss_pred cCCCCCCCCCcHHHHHHHHh--CCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCC------CcceeeccchHHHHH
Q 001990 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP------MSNASLLDEGTAAAE 242 (985)
Q Consensus 171 lG~g~~~~~~p~~v~~~i~~--~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~------~~~~sl~~~~ta~~e 242 (985)
++.|.||...++.+...+.. .......|++ .+|.. ++++.++++++.+ ..++.+++++|+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~ 73 (350)
T cd00609 3 LSIGEPDFPPPPEVLEALAAAALRAGLLGYYP-----DPGLP----ELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhccCCCCCCC-----CCCcH----HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 35677777666665434442 1111122222 22323 3445555555543 556778899998888
Q ss_pred HHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch----------hhhc-cCCCEeEEEEEcC-CCCe
Q 001990 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEG 310 (985)
Q Consensus 243 a~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~----------~l~~-l~~~t~~V~v~~p-n~~G 310 (985)
+++.++. +++++|++++..|+++...++. .|++++.++.+ +++. .++++++|++++| |++|
T Consensus 74 ~~~~~~~---~~g~~vl~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LLLRALL---NPGDEVLVPDPTYPGYEAAARL----AGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTG 146 (350)
T ss_pred HHHHHhC---CCCCEEEEcCCCchhHHHHHHH----CCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCC
Confidence 7766652 2789999999999998888753 57777777542 2233 5678999999988 6799
Q ss_pred eeccHHHH---HHHHHhCCcEEEEEeccccccC--------CCCCCcccceEEEecC-ccccccCCCCCCceEEEEEch-
Q 001990 311 EVLDYGDF---IKNAHANGVKVVMATDLLALTI--------LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ- 377 (985)
Q Consensus 311 ~i~dl~~I---~~~a~~~galliV~a~~~alg~--------l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~- 377 (985)
.+.|++++ .++||++|++++||. .++.+. +.....++.|++++|. |+++ .+|+.+|++++++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~ 221 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDE-AYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPE 221 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEec-chhhceeCCcccccccCcCccCcEEEEeecccccC----CcccceEEEecCHH
Confidence 99876555 489999999999942 222111 1234678899999998 8775 2456789999998
Q ss_pred hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Q 001990 378 EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTF 457 (985)
Q Consensus 378 ~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l 457 (985)
++.+.+.... +....+++. ....++.+++ .. ..++++++.+++.++++++
T Consensus 222 ~~~~~~~~~~------------------------~~~~~~~~~---~~~~~~~~~l--~~-~~~~~~~~~~~~~~~~~~l 271 (350)
T cd00609 222 ELLERLKKLL------------------------PYTTSGPST---LSQAAAAAAL--DD-GEEHLEELRERYRRRRDAL 271 (350)
T ss_pred HHHHHHHHHH------------------------HhcccCCCh---HHHHHHHHHH--hC-cHHHHHHHHHHHHHHHHHH
Confidence 6776652100 000011111 2222222221 22 1168899999999999999
Q ss_pred HHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 458 ALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 458 ~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
++.|++.+...+........+.+..+. ...+.+.|.++||.+... .+..+|++++.. ++|+++++++|+
T Consensus 272 ~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 272 LEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 999999862332222222233444443 566777777889988653 357899999998 999999999986
No 212
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.71 E-value=5.5e-15 Score=174.74 Aligned_cols=308 Identities=13% Similarity=0.153 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHhC-CCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcE------
Q 001990 633 MFNNLGEWLCTITG-FDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------ 703 (985)
Q Consensus 633 ~~~el~~~la~l~G-~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~------ 703 (985)
...++.+.|++++. .+. ..++.+||++++++++.++|.|...+|..++.+||. ...+||.....+...|..
T Consensus 134 ~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~ 213 (504)
T PLN02760 134 PSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKF 213 (504)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCC
Confidence 45678888888853 222 247789999999999999988765445334556665 668999865554433321
Q ss_pred ------EEEEeCCCC------C-------CCCHHHHHHHHHh-cCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHc
Q 001990 704 ------IVSVGTDAK------G-------NINIEELRKAAEA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDN 759 (985)
Q Consensus 704 ------v~~v~~~~~------g-------~iDle~L~~~i~~-~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~ 759 (985)
+..++.+.. + ....++|++++.+ +++++++|+++.. ...|++.+| +++|.++|++|
T Consensus 214 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~ 293 (504)
T PLN02760 214 DLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY 293 (504)
T ss_pred CCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 222332110 0 0113567777742 3356777777643 456777622 99999999999
Q ss_pred CCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCC
Q 001990 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (985)
Q Consensus 760 g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~ 830 (985)
|+++|+|+++ .|+.+.|.+ -+|++++ .|.++ +|. | +|.+++++++.+.+.... ..
T Consensus 294 g~lLI~DEV~----TGfGRtG~~~a~e~~gv~PDivtl--gK~lg----gG~~P-igAv~~~~~i~d~~~~~~-~~---- 357 (504)
T PLN02760 294 DILFIADEVI----CAFGRLGTMFGCDKYNIKPDLVSL--AKALS----SAYMP-IGAVLVSPEISDVIHSQS-NK---- 357 (504)
T ss_pred CCEEEecchh----hCCcccchhhHHHhcCCCCcEEEe--ccccc----CCccc-cceEeecHHHHhhhhccc-cc----
Confidence 9999999987 233333322 2798776 37763 332 5 555777877766543110 00
Q ss_pred CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEE
Q 001990 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFI 906 (985)
Q Consensus 831 ~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~v 906 (985)
.+.....+++.|++..++++.+.|..+.++++ .++..++.++|+++|++. ..++ +.|. + .+ +-
T Consensus 358 ------~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-G-l~--~g 424 (504)
T PLN02760 358 ------LGSFAHGFTYSGHPVSCAVALEALKIYKERNI---PEHVNKIAPRFQDGIKAFSGSPIIGEIRGT-G-LI--LG 424 (504)
T ss_pred ------ccCcccCCCCCCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHhcCCCeeeEEeC-c-eE--EE
Confidence 00000112344567778888888888876654 456667788888888652 2221 1121 1 11 22
Q ss_pred EEecCcccc-CCC-----CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 907 VDLRGLKNT-AGI-----EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 907 v~~~~~~~~-~g~-----~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+.+..-+.. ... -...+.+.|.++|+.+... .+.+|++|+..+|++||| +++++|++++.++.
T Consensus 425 ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~lrl~Ppl~it~eeid---~~~~~l~~al~~~~ 493 (504)
T PLN02760 425 TEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----GDNIMMSPPLIITPEEVD---ELISIYGKALKATE 493 (504)
T ss_pred EEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----CCEEEEECCCCCCHHHHH---HHHHHHHHHHHHHH
Confidence 222110000 000 0345778889999997432 367999999999999999 99999999887653
No 213
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.71 E-value=2.3e-15 Score=170.15 Aligned_cols=287 Identities=17% Similarity=0.192 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHhC-CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 634 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 634 ~~el~~~la~l~G-~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
..++++.+++.+| .+..++..+.|+... .-..++.+. .++++|+++.+.++.+..+++..|++++.++.++
T Consensus 59 ~~~l~~a~a~~~~~~~~~~V~~gnGsde~--i~~l~~~~~-----~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~- 130 (356)
T COG0079 59 YRELRAALAEYYGVVDPENVLVGNGSDEL--IELLVRAFV-----EPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE- 130 (356)
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCChHHH--HHHHHHHhh-----cCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-
Confidence 4578889999999 666667766676533 223344432 3668999999888788888999999999999977
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHc--CCEEEEEccccccccCCCCC--CcCCCcEE
Q 001990 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP--GYIGADVC 787 (985)
Q Consensus 713 g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~--g~lliVD~a~~~~~~g~~~~--g~~g~Di~ 787 (985)
+.+|++++.+.++ +++++|++++|| ++|.+. +.++|.+++... +++|+||+|+..-.. -... -...-+++
T Consensus 131 ~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nli 205 (356)
T COG0079 131 FRLDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLI 205 (356)
T ss_pred cccCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEE
Confidence 9999999999998 689999999995 799997 566666666543 889999998742211 0000 01223366
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+. +||+|-+|+.|-++||++.++++++.+... + .--++++ ....++.+.+.. .+-
T Consensus 206 vl---RTfSKa~gLAGlRlGy~ia~~~~i~~l~~v------------r--~p~~v~~------~a~~aa~aal~~--~~~ 260 (356)
T COG0079 206 VL---RTFSKAFGLAGLRVGYAIANPELIAALNKV------------R--PPFNVSS------PALAAAIAALRD--ADY 260 (356)
T ss_pred EE---EecHHhhhcchhceeeccCCHHHHHHHHHh------------c--CCCCCCH------HHHHHHHHHccc--HHH
Confidence 65 777777788899999999998887655311 0 0012221 111222222221 133
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCC-C-CCCE
Q 001990 868 LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-P-VPGT 944 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~-p-v~~~ 944 (985)
+.+..+.+.+.+.++.+.|++ ++.-+++.. .|.+.+++. .+. ...+.+.|.++||.+..+.. + .+++
T Consensus 261 ~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~----aNFvlv~~~-----~~~-~~~l~~~L~~~giivR~~~~~~~~~~~ 330 (356)
T COG0079 261 LEESVERIREERERLYAALKALGLFGVFPSQ----ANFVLVRVP-----DAE-AAALAEALLKKGILVRDCSSVGLLPGY 330 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeecCCC----CcEEEEECC-----Ccc-HHHHHHHHHHCCEEEEeCCCCCCCCCe
Confidence 455666777788899999987 322123321 344556654 123 56899999999999865532 2 3579
Q ss_pred EEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 945 LMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 945 lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+||++ .|+||.+ +|+++|+++...
T Consensus 331 lRitv---gt~een~---~ll~AL~~~~~~ 354 (356)
T COG0079 331 LRITV---GTPEEND---RLLAALREVLKG 354 (356)
T ss_pred EEEEe---CCHHHHH---HHHHHHHHHHhc
Confidence 99998 7899999 999999988653
No 214
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=3.4e-15 Score=173.68 Aligned_cols=299 Identities=14% Similarity=0.136 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC--------c-
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------M- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------~- 702 (985)
..++.+.|++++..+ ...++.+||+++++++++.+|.|...+|.+++.+||. ...+||....+....| +
T Consensus 89 ~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 168 (429)
T PRK06173 89 AVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFN 168 (429)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhccc
Confidence 457888888887422 1347789999999999999998865555444566765 6678986433322111 0
Q ss_pred ----EEEEEeCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC--CCcccccc---CHHHHHHHHHHcCCEEEEEc
Q 001990 703 ----KIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (985)
Q Consensus 703 ----~v~~v~~~~~------g~iDle~L~~~i~~~~~~t~~Vvi~~p--n~~G~i~~---di~eI~~la~~~g~lliVD~ 767 (985)
.+..+|.... ...+++.|++.++++.+++++|+++-. ...|.+.+ -+++|.++|++||+++|+|+
T Consensus 169 ~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DE 248 (429)
T PRK06173 169 HSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDE 248 (429)
T ss_pred ccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecc
Confidence 1223332110 012477788888766678999988752 34566542 38999999999999999999
Q ss_pred cccccccCCCCCCc------C--CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCCCCCCCC
Q 001990 768 ANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 768 a~~~~~~g~~~~g~------~--g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
+| .++ .+.|. + .+|++++ .|.+ + || .-++.+.+++++.+.+.....+ ..
T Consensus 249 v~-tG~---GrtG~~~a~~~~gv~PDiv~~--gK~l----~-gG~~p~~a~~~~~~i~~~~~~~~~~--------~~--- 306 (429)
T PRK06173 249 IA-TGF---GRTGKLFALEHAGVVPDIMCI--GKAL----T-GGYLTLSATITTEAIAQTICSGEAK--------CF--- 306 (429)
T ss_pred hh-cCC---CcCCcchHHHhcCCCCCEEEe--ehhh----h-CCccccceEEecHHHHHHHhcCCCC--------cc---
Confidence 98 343 23332 1 3688874 4776 3 44 3456666777766554210000 00
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeE--cCCCCceeEEEEEEecCccc
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILF--RGVNGTVAHEFIVDLRGLKN 914 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~--~g~~~~~~~~~vv~~~~~~~ 914 (985)
...+++.|+++.++++.+.|+.+.++++ .++..++.++|++.|++ .+..+. .+. +. + +.+.+..
T Consensus 307 --~~~~T~~g~p~~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~-Gl-~--~~iel~~--- 374 (429)
T PRK06173 307 --MHGPTFMANPLACAIAAESIRLLLESPW---QQNIQRIEAQLKQELAPAAEFDSVAEVRVL-GA-I--GVVEMKE--- 374 (429)
T ss_pred --ccCCCCCcCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhhcCCCeeeeecc-ce-E--EEEEeCC---
Confidence 0011233466777778888888866544 34667778889988875 233221 111 11 2 2233321
Q ss_pred cCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 915 ~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
......+.+.|.++|+++... .+.||+.|....|++|+| +++++|++++.++
T Consensus 375 --~~~~~~i~~~l~e~Gi~v~~~----g~~l~~~Ppl~it~~ei~---~~~~~l~~~l~~~ 426 (429)
T PRK06173 375 --PVNMATLQPRFVEHGIWVRPF----GKLVYIMPPFIISPDELS---QLTSGLLRVLKQE 426 (429)
T ss_pred --cccHHHHHHHHHHCCeEEEec----CCEEEEeCCccCCHHHHH---HHHHHHHHHHHHH
Confidence 224578999999999998532 368999999999999999 9999999988753
No 215
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.70 E-value=2.4e-15 Score=174.45 Aligned_cols=318 Identities=15% Similarity=0.150 Sum_probs=198.4
Q ss_pred CCccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHH
Q 001990 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (985)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea 243 (985)
++.+.+|.+..+.++..|+.+.+.+...-.-+ .++...+...+|..+...++++.+++++|.+ . ..++.+|+.+..+
T Consensus 41 g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~-~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~-~i~~tsG~~a~~~ 117 (397)
T PRK06939 41 GKEVINFCANNYLGLANHPELIAAAKAALDSH-GFGMASVRFICGTQDLHKELEEKLAKFLGTE-D-AILYSSCFDANGG 117 (397)
T ss_pred CCeEEEeeccCccccCCCHHHHHHHHHHHHHc-CCCCcccccccCCcHHHHHHHHHHHHHhCCC-c-EEEEcChHHHHHH
Confidence 33445555433334435555543333211000 1222233456777788888999999999976 2 4455556666666
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe---Cchhhhc-cC----C--CEeEEEEEcC-CCCeee
Q 001990 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----G--DVCGVLVQYP-GTEGEV 312 (985)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~---~~~~l~~-l~----~--~t~~V~v~~p-n~~G~i 312 (985)
++.++ + ++||+|++++..|+++...++. .|.+++.+ |++++++ +. + ++++|++.+. |.+|.+
T Consensus 118 ~~~~l-~--~~gd~vi~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~ 190 (397)
T PRK06939 118 LFETL-L--GKEDAIISDALNHASIIDGVRL----CKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDI 190 (397)
T ss_pred HHHHh-C--CCCCEEEEEhhhhHHHHHHHHh----cCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCc
Confidence 65554 2 3899999999999999887753 24444444 5556654 43 3 6777776543 678999
Q ss_pred ccHHHHHHHHHhCCcEEEEEeccccccCCCCC---------CcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhc
Q 001990 313 LDYGDFIKNAHANGVKVVMATDLLALTILKPP---------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRM 382 (985)
Q Consensus 313 ~dl~~I~~~a~~~galliV~a~~~alg~l~~p---------~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~ 382 (985)
.|+++|.++|+++|+++++| +..+.|.+... -..++|++++|. |+|++ +..|++++++++++.
T Consensus 191 ~~~~~l~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g------~r~G~v~~~~~~~~~ 263 (397)
T PRK06939 191 APLPEICDLADKYDALVMVD-DSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGG------ASGGYTAGRKEVIDW 263 (397)
T ss_pred CCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCc------cCceEEEeCHHHHHH
Confidence 99999999999999999994 34444433211 112579999997 88742 234899988887776
Q ss_pred CCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHh
Q 001990 383 MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLK 462 (985)
Q Consensus 383 lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~ 462 (985)
+-.. ... +.+ +++ +.+....+..+++ .++. + .+++.++..++.+++++.|+
T Consensus 264 l~~~---------~~~-~~~-------------~~~--~~~~~~~a~~~al--~~~~-~-~~~~~~~~~~~~~~l~~~L~ 314 (397)
T PRK06939 264 LRQR---------SRP-YLF-------------SNS--LAPAIVAASIKVL--ELLE-E-SDELRDRLWENARYFREGMT 314 (397)
T ss_pred HHHh---------Ccc-ccc-------------cCC--CCHHHHHHHHHHH--HHHh-c-CHHHHHHHHHHHHHHHHHHH
Confidence 5110 000 000 011 1112222333333 3332 2 25677888899999999999
Q ss_pred cCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 463 KLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 463 ~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~-------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
++| +++... ....+.+..+. ..++.+.|.++||.+... ..+.+|++++.+++++|++++++.|..
T Consensus 315 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~ 389 (397)
T PRK06939 315 AAG-FTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEK 389 (397)
T ss_pred HcC-CCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 886 765432 11223333332 678999999999977432 125799999999999999999999974
No 216
>PRK07482 hypothetical protein; Provisional
Probab=99.70 E-value=6.4e-15 Score=173.17 Aligned_cols=310 Identities=14% Similarity=0.155 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC---------
Q 001990 633 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------- 701 (985)
Q Consensus 633 ~~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------- 701 (985)
...++.+.|++++..+ ...++.+||+++++++++.+|.|...+|.++|.+||. ..++||....+....|
T Consensus 95 ~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~ 174 (461)
T PRK07482 95 ASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFD 174 (461)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccC
Confidence 3557888888887422 1246789999999999999998765555445667775 6689997644332211
Q ss_pred ---cEEEEEeCCCC------C-------CCCHHHHHHHHHhc-CCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcC
Q 001990 702 ---MKIVSVGTDAK------G-------NINIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (985)
Q Consensus 702 ---~~v~~v~~~~~------g-------~iDle~L~~~i~~~-~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g 760 (985)
-.+..++.... + .-+++++++.+.+. .+++++|+++-. ...|++.+ -+++|.++|++||
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~g 254 (461)
T PRK07482 175 LPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYD 254 (461)
T ss_pred CCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 01222322110 0 11467888888532 367888888643 34576642 3899999999999
Q ss_pred CEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCC
Q 001990 761 GQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (985)
Q Consensus 761 ~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~ 832 (985)
+++|+|+++ .|+.+.|++ -+|++++ .|.++ +|-..+|.+++++++.+.+.... .
T Consensus 255 iLlI~DEV~----tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~~i~~~~~~~~--~------ 316 (461)
T PRK07482 255 ILLIADEVV----TGFGRLGSMFGSDHYGIEPDLITV--AKGLT----SAYAPLSGSIVGEKVWDVLEQGS--D------ 316 (461)
T ss_pred CEEEEeccc----cCCCcCcchhhHHhcCCCCCEEEE--ccccc----cCccccceeeecHHHHHHHhccc--c------
Confidence 999999876 445455433 2799886 37763 33223566667777654432100 0
Q ss_pred CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEE
Q 001990 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIV 907 (985)
Q Consensus 833 ~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv 907 (985)
..+.....+++.|+++.++++.+.|..+.++++. ++..+..++|.++|++. ..++ +.|. + .+ +-+
T Consensus 317 ---~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-G-lm--~gi 386 (461)
T PRK07482 317 ---EHGAIGHGWTYSGHPICAAAALANLDILERENLV---GNAAEVGAYFRARLRAAFGDHPLVGEVRGV-G-ML--AAV 386 (461)
T ss_pred ---cCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHhcCCCEEEEeec-e-eE--EEE
Confidence 0000011123556788888888999988776654 34566778888888642 2221 1221 1 11 222
Q ss_pred EecCccc-cCCCC-----HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 908 DLRGLKN-TAGIE-----PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 908 ~~~~~~~-~~g~~-----~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.+..-.. ....+ ...+.+.|.++|+++... |..+.+|+.|+..+|++||| +++++|.+.++++
T Consensus 387 el~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--~~~~~i~~~Ppl~it~~ei~---~~~~~l~~~l~~~ 455 (461)
T PRK07482 387 EFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM--PHGDILGFAPPLVLTRAEAD---EIVAIAKDAVDEV 455 (461)
T ss_pred EeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC--CCCCEEEEeCCCCCCHHHHH---HHHHHHHHHHHHH
Confidence 2210000 00011 356788889999987422 12478999999999999999 9999999988775
No 217
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=3.6e-15 Score=171.72 Aligned_cols=304 Identities=15% Similarity=0.099 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC-
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~- 712 (985)
..++++.+++++|.+.+ +.+++|+.|...++.++ +..++++||++...|..+...+...|++++.++++.+
T Consensus 35 ~~~le~~la~~~g~~~~-v~~~sgt~al~lal~al-------~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQHA-IAVSSATAGMHITLMAL-------GIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHc-------CCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCc
Confidence 55889999999999864 55677777664443332 1246789999998777666667789999999999765
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC-CCCcCCCcEEEeCC
Q 001990 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGADVCHLNL 791 (985)
Q Consensus 713 g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-~~g~~g~Di~~~s~ 791 (985)
+.+|+++++++++ ++|++|+.+++ +|... |+++|+++|+++|+++++|++|+.+..... ..+.+|.++.+++.
T Consensus 107 ~~~d~~~l~~~i~---~~tkav~~~~~--~G~~~-d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~ 180 (379)
T PRK11658 107 LMVTPEAIEAAIT---PRTKAIIPVHY--AGAPA-DLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHA 180 (379)
T ss_pred CCcCHHHHHHhcc---cCCeEEEEeCC--CCCcC-CHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCC
Confidence 4689999999997 78998886654 78887 899999999999999999999975432211 24667777777777
Q ss_pred cccccccCCCCCCcceeeeec-ccccCcCCC-CccccCCCCC---CCCC-------CCCCCCcccccchhhhHHHHHHHH
Q 001990 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGIP---APEK-------SQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 792 hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg-~~~g~~~~~~---~~~~-------~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
+|.+. + +.+|+++.+ +++...+.. +..|...+.. .... ..|+ |.. ...+.+|..
T Consensus 181 ~K~l~-----~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~-n~~------~~~l~AAl~- 246 (379)
T PRK11658 181 IKNIT-----C-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGY-KYN------LADINAAIA- 246 (379)
T ss_pred CCcCc-----c-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecccc-ccC------cCHHHHHHH-
Confidence 78763 2 335666664 444433211 0111110000 0000 0011 110 011222222
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhcc-CCee-EcCCC-CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL-FRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 860 l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~-~~i~-~~g~~-~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
....+++.+..++..++++++.+.|++. +... .+... ....+.+++.++. ...+.+..++.+.|.++||.+..
T Consensus 247 --~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~L~~~gI~~~~ 322 (379)
T PRK11658 247 --LVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDE--ERCGISRDALMEALKERGIGTGL 322 (379)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECC--ccccCCHHHHHHHHHHCCCCCcc
Confidence 2223566677777778888888888762 2111 11110 1122344454431 01145678999999999997542
Q ss_pred CC-----------------CCC-----CCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 937 MS-----------------WPV-----PGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 937 ~~-----------------~pv-----~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.. +|. ...|.+-++...|++|++ +.+++|+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~---~i~~~i~~~~ 377 (379)
T PRK11658 323 HFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVD---RVITALQQIA 377 (379)
T ss_pred cCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHH---HHHHHHHHHH
Confidence 11 110 134555566678999999 9999998864
No 218
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.70 E-value=3.2e-15 Score=172.55 Aligned_cols=306 Identities=14% Similarity=0.091 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-C
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-~ 712 (985)
..++++.+++++|.+.. +.+++|++|...++.++ +..++++||++...|......+...|++++.+++++ +
T Consensus 31 ~~~le~~la~~~g~~~~-v~~~sgt~al~~~l~al-------~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKYA-VAFNSATSALHIACLAL-------GVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCeE-EEEcCHHHHHHHHHHHc-------CCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCc
Confidence 45788999999998764 45567776654333332 124678999999877666666778999999999964 5
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCC----cEE
Q 001990 713 GNINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA----DVC 787 (985)
Q Consensus 713 g~iDle~L~~~i~~~~-~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~----Di~ 787 (985)
+.+|++++++++++++ ++|++|++++ .+|... |+++|+++|+++|+++++|++|+.+.. + ....+|. |+.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~-~~~~i~~l~~~~~~~lI~D~a~a~g~~-~-~~~~~g~~~~~d~~ 177 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSV-DMQAIAALAKKHGLKIIEDASHALGAE-Y-GGKPVGNCRYADAT 177 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccC-CHHHHHHHHHHcCCEEEEECCCcccCc-c-CCEeCCCccccceE
Confidence 7899999999997321 4688888765 468877 899999999999999999999975532 2 1122344 999
Q ss_pred EeCCc--ccccccCCCCCCcceeeeec-ccccCcCCC-CccccCCCC---CC-----CCCCCCCCCcccccchhhhHHHH
Q 001990 788 HLNLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---PA-----PEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 788 ~~s~h--Ktl~~p~g~GGPg~G~l~~~-~~l~~~lpg-~~~g~~~~~---~~-----~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
++|+| |+++. +.+|+++.+ +++.+.+.. +..|...+. .. +..+..+... + + ...-+.+
T Consensus 178 ~~S~~~~K~~~~------~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~--n-~-~m~~l~a 247 (380)
T TIGR03588 178 VFSFHPVKIITT------AEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGF--N-Y-RMTDIQA 247 (380)
T ss_pred EEecCCCCcccc------cCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeecccc--c-c-CccHHHH
Confidence 99998 77742 234555554 444332210 000110000 00 0000000000 0 0 0011111
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCC--C-CceeEEEEEEecCccccCCCCHHHHHHHHHHCCC
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--N-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~--~-~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi 932 (985)
+.. +..+ +.+.+..++..++++++.+.|.+...+....+ . ....+.+++.+.. ..+.+.+++.+.|.++||
T Consensus 248 a~g-~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~r~~l~~~L~~~gI 321 (380)
T TIGR03588 248 ALG-LSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQ---EFGCTRKEVFEALRAAGI 321 (380)
T ss_pred HHH-HHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECC---cCCCCHHHHHHHHHHCCC
Confidence 111 1111 23555666777888999999987322211111 1 1122334444431 124578899999999999
Q ss_pred ccCCCCCC---------------C-------CCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 933 HGPTMSWP---------------V-------PGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 933 ~~~~~~~p---------------v-------~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
.+.....| . ...|++.++...|++|++ +.+++|+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~---~i~~~l~~~ 379 (380)
T TIGR03588 322 GVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQ---RVVETLRKV 379 (380)
T ss_pred CcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHH---HHHHHHHHh
Confidence 76421111 1 145888888889999999 999999875
No 219
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.70 E-value=4.7e-15 Score=172.44 Aligned_cols=292 Identities=14% Similarity=0.126 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhcC-----------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG----------- 701 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~G----------- 701 (985)
..+++++|+++++.+. .++.+||++++++++..+|.|...++...+++|| +...+||.........|
T Consensus 84 ~~~l~~~l~~~~~~~~-~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~ 162 (403)
T PRK05093 84 ALRLAKKLIDATFAER-VFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPK 162 (403)
T ss_pred HHHHHHHHHhhCCCCE-EEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCC
Confidence 4478899999887654 4778999999999999888775322212344565 46688998764433211
Q ss_pred -cEEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC-ccccc---cCHHHHHHHHHHcCCEEEEEccccccccCC
Q 001990 702 -MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (985)
Q Consensus 702 -~~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~-~G~i~---~di~eI~~la~~~g~lliVD~a~~~~~~g~ 776 (985)
.+++.+|.+ |++++++.++ +++++|+++..+. .|++. ..+++|+++|++||+++|+|+++. +++--
T Consensus 163 ~~~~~~~~~~-----d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~ 233 (403)
T PRK05093 163 PADITHVPFN-----DLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRT 233 (403)
T ss_pred CCCcEEeCCC-----CHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCC
Confidence 134444443 8999999997 6899998884454 45543 139999999999999999999975 33111
Q ss_pred CCC---Cc--CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 TSP---GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 ~~~---g~--~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
..+ .. ..+|+.++ .|+++ +|..+|++++++++.+.+.....+ .+ .+ +++.
T Consensus 234 g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~vv~~~~i~~~l~~~~~~------------~t--~~----~~~~ 288 (403)
T PRK05093 234 GDLFAYMHYGVTPDILTS--AKALG-----GGFPIGAMLTTAEIASHFKVGTHG------------ST--YG----GNPL 288 (403)
T ss_pred ccchhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhhcCCCCCC------------CC--CC----CCHH
Confidence 111 11 23676544 58774 457799999998877665321100 11 11 1333
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-c--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-H--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
...++.+.|+.+..+. ..++..++.+++.+.|++ . +.+....+....+ +-+.+.. .......++++.|.
T Consensus 289 ~~~aa~a~L~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~--~~~~l~~---~~~~~~~~~~~~l~ 360 (403)
T PRK05093 289 ACAVAEAVFDIINTPE---VLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLL--IGAELKP---QYKGRARDFLNAAA 360 (403)
T ss_pred HHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceE--EEEEecC---cchhHHHHHHHHHH
Confidence 3444455555553332 335666778888888876 2 2221111101111 2223220 00013568899999
Q ss_pred HCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 929 DYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 929 e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
++|+.+.... .+.+|++++..+|++||+ ++++.|++++.+
T Consensus 361 ~~Gv~v~~~g---~~~lRl~~~~~~~~~~i~---~~~~~l~~~l~~ 400 (403)
T PRK05093 361 EEGVMVLVAG---PDVLRFAPSLVIEEADID---EGLARFEKAVAK 400 (403)
T ss_pred HCCeEEecCC---CCEEEEeCCCCCCHHHHH---HHHHHHHHHHHH
Confidence 9999874321 378999999999999999 999999988764
No 220
>PLN02263 serine decarboxylase
Probab=99.70 E-value=9.7e-15 Score=167.93 Aligned_cols=334 Identities=15% Similarity=0.098 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHcCCCccceecCCCCCCCCC-cHHHHH---HHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCC
Q 001990 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHV-PPVILR---NIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (985)
Q Consensus 151 ~e~~~~~~~~~~~n~~~~~~lG~g~~~~~~-p~~v~~---~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~ 226 (985)
.++++.+.+.-..+... |+|- .++.-. +..+.+ ..+.|.++-..+.||+ -++.+...+.-+++++|+|.
T Consensus 76 ~~~l~~~~~~~~~~~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~----~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 76 ASVLARYRKTLVERTKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYG----VHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHhcccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcc----hhHHHHHHHHHHHHHHHhCC
Confidence 45666666665555432 4452 222222 333332 1223333322223442 24556667778899999999
Q ss_pred CCc--ceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC
Q 001990 227 PMS--NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 295 (985)
Q Consensus 227 ~~~--~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~ 295 (985)
+.. ...+++|||.+.-.++++.|-. .+...|++|+..|.|+.+.++. +|++++.++. ++|++ +.
T Consensus 149 p~~~~~G~vtsGGTEaNL~Al~aARe~-~~~~vvy~S~~aH~Sv~KAa~l----lgi~~~~Vp~d~~g~mD~~aL~~aI~ 223 (470)
T PLN02263 149 EKNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARM----YRMECVKVDTLVSGEIDCADFKAKLL 223 (470)
T ss_pred CCCCCeEEEeCcHHHHHHHHHHHHHhh-cCCcEEEEcCCccHHHHHHHHh----cCCcceEeccCCCCcCcHHHHHHHHH
Confidence 753 4678888885443333332211 1344788999999999998754 5777777754 45655 53
Q ss_pred CC---EeEEEEEcC-CCCeeeccHHHHHHHHHhCCc-----EEEEEeccccc--cCCCC-C---CcccceEEEecC-ccc
Q 001990 296 GD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANGV-----KVVMATDLLAL--TILKP-P---GELGADIVVGSA-QRF 359 (985)
Q Consensus 296 ~~---t~~V~v~~p-n~~G~i~dl~~I~~~a~~~ga-----lliV~a~~~al--g~l~~-p---~~~GaDi~v~s~-k~l 359 (985)
++ +..|+.+.+ +.+|.++||++|+++|+++|+ +++||+-..+. ..+.. + ...+||-+..++ |++
T Consensus 224 ~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l 303 (470)
T PLN02263 224 ANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFV 303 (470)
T ss_pred hCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCcccc
Confidence 33 466677877 469999999999999999997 99996522111 11111 1 223499999999 777
Q ss_pred cccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcC
Q 001990 360 GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG 439 (985)
Q Consensus 360 g~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g 439 (985)
+.|++ +|++.+|+++++.+... ..| +. .+...+ .++-+. .....+-+ .+..+|
T Consensus 304 ~~P~~-----cgvll~R~~~~~~~~~~-----------~~Y-l~--~~d~ti---~gSR~g---~~al~lW~--~L~~~G 356 (470)
T PLN02263 304 GCPMP-----CGVQITRMEHINVLSSN-----------VEY-LA--SRDATI---MGSRNG---HAPIFLWY--TLNRKG 356 (470)
T ss_pred CCCcC-----EEEEEEehhhHhhhccC-----------hHh-hC--CCCCCc---CCCCCc---HHHHHHHH--HHHHhC
Confidence 77864 57788887665443110 001 00 000000 011111 11112222 258999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCCHHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHH
Q 001990 440 PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLED 519 (985)
Q Consensus 440 ~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~L~~~Gi~~~~~~~~~lris~~~~~t~ed 519 (985)
.+|++++.+++.++|+++.++|+++| +.++..|...+|+|..+... +..+|+.+... ++.++++++...+++.
T Consensus 357 ~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p~s~~V~f~~p~~~-----~~~~gW~L~~~-~~~~Hivvmphv~~~~ 429 (470)
T PLN02263 357 YRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNELSSTVVFERPKDE-----EFVRRWQLACQ-GNIAHVVVMPSVTIEK 429 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCceEEEEecCchH-----HhhcceEEccC-CCcEEEEEcCCCCHHH
Confidence 99999999999999999999999997 77765566667888765321 23578988763 4679999999999999
Q ss_pred HHHHHHHHhCC
Q 001990 520 VDKLFIVFAGG 530 (985)
Q Consensus 520 id~ll~~l~~~ 530 (985)
+|+|++.|...
T Consensus 430 id~fi~DL~~~ 440 (470)
T PLN02263 430 LDYFLKELVEK 440 (470)
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 221
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.70 E-value=4.1e-15 Score=155.49 Aligned_cols=308 Identities=15% Similarity=0.132 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcc--ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcE
Q 001990 630 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~~--~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~ 703 (985)
..+++.++.+-+...|..... .++.++|..|.++++.-.. .++|+|++-.. |.+. ..++..|++
T Consensus 48 ~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~--G~wg~ra~D~~~r~ga~ 117 (385)
T KOG2862|consen 48 FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLL--------EPGDNVLVVST--GTWGQRAADCARRYGAE 117 (385)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEe--chHHHHHHHHHHhhCce
Confidence 446777888888888876553 4566788888877765432 47888887544 3332 225678999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC-HHHHHHHHHHcCCEEEEEccccccccCCCCCCc
Q 001990 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG-IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (985)
Q Consensus 704 v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d-i~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~ 781 (985)
|.+|+.+..+.+.++.+++++.+| +.++|++++. +.+|+.+ | ++.+.++||+|+++|+||++.+.+...| ...+
T Consensus 118 V~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q-~~~~~~g~lc~k~~~lllVD~VaSlggt~F-~mDe 193 (385)
T KOG2862|consen 118 VDVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQ-DLLAISGELCHKHEALLLVDTVASLGGTEF-EMDE 193 (385)
T ss_pred eeEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccc-hHHHHHHHHhhcCCeEEEEechhhcCCccc-eehh
Confidence 999998877889999999999975 4567888886 5699999 7 7888899999999999999865444333 4568
Q ss_pred CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCc---cccCCCC---C-------CCCCCCCCCCcccccch
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP---VVSTGGI---P-------APEKSQPLGTIAAAPWG 848 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~---~g~~~~~---~-------~~~~~~~t~~i~s~~~g 848 (985)
||+|+.....+|.++.| ||+++++.++.....+..+- +....|. . ..++-..|+++..
T Consensus 194 wgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~l---- 264 (385)
T KOG2862|consen 194 WGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQL---- 264 (385)
T ss_pred hcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHH----
Confidence 99999999999999654 57888888865544332211 1000010 0 0011112333321
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCC--CCceeEEEEEEecCccccCCCCHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~--~~~~~~~~vv~~~~~~~~~g~~~~~l~~ 925 (985)
+. .--++|..+-++|+.+..+++.+++++++..|++ |++.....+ ..+..+ .+.++ .++|..+++.
T Consensus 265 --ly--~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvt--tv~vp-----~gvDw~dVv~ 333 (385)
T KOG2862|consen 265 --LY--SLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVT--TVKVP-----YGVDWKDVVA 333 (385)
T ss_pred --HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcce--eeecC-----CCCCHHHHHH
Confidence 11 1224566667899999999999999999999998 766533221 112222 23332 4789999999
Q ss_pred HHHHC-CCccCCCCCC-CCCEEEEeccCCC-CHHhhchHHHHHHHHHHHHHH
Q 001990 926 RLMDY-GFHGPTMSWP-VPGTLMIEPTESE-SKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 926 ~L~e~-Gi~~~~~~~p-v~~~lris~t~~~-t~eeId~~~~~i~aL~~i~~~ 974 (985)
++..+ ++.++....| ++..+||-..-.| +.|-|| ..++.|+..+++
T Consensus 334 ~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~---~v~~ll~~alq~ 382 (385)
T KOG2862|consen 334 YAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYID---NVVELLKLALQR 382 (385)
T ss_pred HHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHH---HHHHHHHHHHhh
Confidence 98877 5555432223 3567888765443 667777 888888776654
No 222
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.70 E-value=3.6e-15 Score=171.95 Aligned_cols=214 Identities=24% Similarity=0.257 Sum_probs=157.6
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchh---
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~--- 290 (985)
.++++.+|+++|.+. +.++.+|++++.+++.++ .. +||+|+++...|+.+...++..+...|++++++|.++
T Consensus 62 ~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~ 136 (391)
T TIGR01328 62 SNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTI-LK--AGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE 136 (391)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 457789999999987 678899998877766665 23 8899999999999888888777778899999998754
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |.+++| |+
T Consensus 137 l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~~~~~g~Divv~S~sK~lgg~---g~ 212 (391)
T TIGR01328 137 VKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVD-NTFATPMLTNPVALGVDVVVHSATKYIGGH---GD 212 (391)
T ss_pred HHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCchhccCCchhcCCCEEEccccccccCC---CC
Confidence 445 7788999999998 68999999999999999999999994 45566666667788999999998 877643 33
Q ss_pred CceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHH
Q 001990 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (985)
Q Consensus 368 P~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 447 (985)
+..|+++.++++++++. ..+ ++..... ..++. .++ +...+.+-+..+.
T Consensus 213 ~~gG~v~~~~~li~~l~--~~~----------------------~~~~~g~---~l~~~---~a~--l~l~~L~tl~~r~ 260 (391)
T TIGR01328 213 VVAGLICGKAELLQQIR--MVG----------------------IKDMTGS---VISPF---DAW--LILRGLKTLNIRM 260 (391)
T ss_pred ceEEEEEcCHHHHHHHH--HHH----------------------HHhCCCC---CCCcH---HHH--HHHhCcCcHHHHH
Confidence 34688888887766541 000 0000000 00121 111 1333445567777
Q ss_pred HHHHHHHHHHHHHHhcCCCEE
Q 001990 448 QRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~ 468 (985)
++..+++.+++++|++.++++
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 888899999999999885454
No 223
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.70 E-value=2.1e-15 Score=172.08 Aligned_cols=280 Identities=16% Similarity=0.164 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---
Q 001990 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (985)
Q Consensus 212 ~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--- 288 (985)
...++++.+++++|.+. +.++.+||.+++.++.+++.. +||+|+++...|+++...+.. .|++++.++.
T Consensus 19 ~~~~~~~~la~~~~~~~--~~~~~sgt~al~~~l~~l~~~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKY--AVAVSSGTAALHLALRALGIG--PGDEVIVPSFTFVATANAILL----LGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHHH----cCCeEEEEecCCC
Confidence 35568899999999753 777889998888877766433 789999999999999888753 5788777643
Q ss_pred ------hhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---CCcccceEEEec--C
Q 001990 289 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGS--A 356 (985)
Q Consensus 289 ------~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~---p~~~GaDi~v~s--~ 356 (985)
+++++ +++++++|++++ ++|.+.|+++|.++|+++|+++++++ .+++|.... .+.+ .|+.+.| .
T Consensus 91 ~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~i~li~D~-a~~~g~~~~~~~~~~~-~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITPRTKAIIPVH--LYGNPADMDAIMAIAKRHGLPVIEDA-AQALGATYKGRKVGTF-GDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCcCCeEEEEEC--CCCCcCCHHHHHHHHHHcCCeEEEEC-CCCCCCeECCEEcccC-cceeEEcCCC
Confidence 34555 678899999886 58999999999999999999999952 345543221 1222 5787777 3
Q ss_pred -ccccccCCCCCCceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001990 357 -QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (985)
Q Consensus 357 -k~lg~P~~~GGP~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y 434 (985)
|+++ +|..|++.++ +++.+++....-+ +..... .+.+..+.+. +..+..+.+++
T Consensus 167 ~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~------~~~~~~---------~~~~~~~~~~--~~~~~~~~aa~- 222 (352)
T cd00616 167 TKNLT------TGEGGAVVTNDEELAERARLLRNH------GRDRDR---------FKYEHEILGY--NYRLSEIQAAI- 222 (352)
T ss_pred CCCCc------ccCceEEEECCHHHHHHHHHHHHc------CCCCCC---------Cccccceeee--ccCcCHHHHHH-
Confidence 6553 1223666665 4665544211100 000000 0011111110 01111222222
Q ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-----CcceEEEecC---C--HHHHHHHHHHcCceeeeec-
Q 001990 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCA---D--AHAIASAAYKIEMNLRVVD- 503 (985)
Q Consensus 435 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-----~~~~~~i~~~---~--~~~l~~~L~~~Gi~~~~~~- 503 (985)
.....++++++.++..++++++++.|+++.|++++..+ ....+.|.++ + ..++.+.|.++||.++...
T Consensus 223 -~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~ 301 (352)
T cd00616 223 -GLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYP 301 (352)
T ss_pred -HHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecC
Confidence 22233567888889999999999999997448877432 1123555544 3 8899999999999653210
Q ss_pred --------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 504 --------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 504 --------------------------~~~lris~~~~~t~edid~ll~~l~ 528 (985)
.+.+|++++.++|++|+++++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 302 PLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 224
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.70 E-value=1.4e-15 Score=174.78 Aligned_cols=285 Identities=15% Similarity=0.140 Sum_probs=183.7
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~ 714 (985)
.++++.+|+++|.+...+..++|++.. ...+++.+. .++++|+++++.|..+...+...|++++.+|. +++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~ 141 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEI--LELLARAYL-----GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYG 141 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCC
Confidence 478899999999877666666665522 112222221 35788999987666566667789999999988 4577
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEEcccccccc-CCCCC----CcCCCc-
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQV-GLTSP----GYIGAD- 785 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~--g~lliVD~a~~~~~~-g~~~~----g~~g~D- 785 (985)
+|+++++++++ +++++|++++| |++|.+. +.++|.++++.+ |+++++|+++..... +...+ .....+
T Consensus 142 ~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 142 HDLDAMLAAVT---PRTRLVFIANPNNPTGTYL-PAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 89999999997 68899999999 5799998 789999998875 899999998742111 00000 011123
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
+++.|+.|.|+ ..|.++|++++++++.+.+.... ...+++ .....++..++.. .
T Consensus 218 i~~~S~SK~~g----~~G~RiG~l~~~~~~~~~l~~~~--------------~~~~~~------~~~~~~a~~~l~~--~ 271 (367)
T PRK02731 218 VVTRTFSKAYG----LAGLRVGYGIAPPEIIDALNRVR--------------QPFNVN------SLALAAAVAALDD--D 271 (367)
T ss_pred EEEeeehHhhc----CcccceeeeeCCHHHHHHHHHcc--------------CCCCCC------HHHHHHHHHHhCC--H
Confidence 45566677764 45778999999987665442100 001111 1111222233321 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CCCCC
Q 001990 866 KGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPG 943 (985)
Q Consensus 866 ~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~pv~~ 943 (985)
+.+++..+...++.+++.+.|++ ++.+. .+.+. .+.++++ .+.+..++++.|.++||.+.... +..++
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~---~~~i~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 272 AFVEKSRALNAEGMAWLTEFLAELGLEYI--PSVGN---FILVDFD-----DGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccC--CCCce---EEEEECC-----CCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 22444555556677788888876 44332 22222 2344543 13578899999999999875432 22357
Q ss_pred EEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 944 TLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 944 ~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.+|+++ ++.+|++ +|+++|+++++
T Consensus 342 ~iRis~---~~~~e~~---~l~~aL~~~~~ 365 (367)
T PRK02731 342 ALRITI---GTEEENR---RFLAALKEFLA 365 (367)
T ss_pred eEEEec---CCHHHHH---HHHHHHHHHHh
Confidence 899998 4789999 99999998754
No 225
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.70 E-value=3.6e-15 Score=172.84 Aligned_cols=300 Identities=15% Similarity=0.136 Sum_probs=183.9
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cccceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+.+|. +...+.. ++++++... +++.+. .++++|+++++.|..+...+...|+++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~---~~~~l~-----~~g~~Vlv~~p~y~~~~~~~~~~g~~~ 141 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYL---AFESLL-----EEGDEVIIPDPAFVCYVEDAKIAEAKP 141 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHH---HHHHhc-----CCCCEEEEcCCCCcccHHHHHHcCCEE
Confidence 56666665666666555564 3334444 444444432 333221 367899999998888877788899999
Q ss_pred EEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEcccccccc-C--
Q 001990 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV-G-- 775 (985)
Q Consensus 705 ~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~-g-- 775 (985)
+.+|++++ +.+|+++++++++ +++++|++++| |++|.+. | +++|+++|+++++++++|+++..... +
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (391)
T PRK08361 142 IRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAK 217 (391)
T ss_pred EEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCC
Confidence 99998764 4799999999997 67899999999 5799987 6 89999999999999999998742111 0
Q ss_pred CCCCC--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHH
Q 001990 776 LTSPG--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 776 ~~~~g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
..... ....++++.|++|+|+.| |.++|++++++++++.+.... ...+.++++ ...
T Consensus 218 ~~~~~~~~~~~~i~~~s~SK~~~~~----GlRiG~~~~~~~~~~~~~~~~------------~~~~~~~~~------~~q 275 (391)
T PRK08361 218 HYPMIKYAPDNTILANSFSKTFAMT----GWRLGFVIAPEQVIKDMIKLH------------AYIIGNVAS------FVQ 275 (391)
T ss_pred CCCHhhcCCCCEEEEecCchhcCCc----HhhhhhhccCHHHHHHHHHHH------------hhhccCCCh------HHH
Confidence 00111 123467889999998543 556999999876654432100 000111111 111
Q ss_pred HHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HC
Q 001990 854 PISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (985)
Q Consensus 854 ~~A~a~l~~lg~--~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~ 930 (985)
.++...+. .+. +.+.+..+...++.+.+.+.|++...+.+..+++..+ +.++++. .+.+..++.+.|. ++
T Consensus 276 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~--~~~~l~~----~~~~~~~l~~~l~~~~ 348 (391)
T PRK08361 276 IAGIEALR-SKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY--VFANIDE----TGMSSEDFAEWLLEKA 348 (391)
T ss_pred HHHHHHhc-CCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE--EEEECCC----CCCCHHHHHHHHHHhC
Confidence 11112221 111 2345555566777788888887621332222222221 2344431 1457788998886 47
Q ss_pred CCccCCCC-CC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 931 GFHGPTMS-WP--VPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 931 Gi~~~~~~-~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
||.+.... |. .++++|++++. ++++++ ..++.|++.++
T Consensus 349 gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~---~al~~l~~~l~ 389 (391)
T PRK08361 349 RVVVIPGTAFGKAGEGYIRISYAT--SKEKLI---EAMERMEKALE 389 (391)
T ss_pred CEEEcCchhhCCCCCCEEEEEecC--CHHHHH---HHHHHHHHHHh
Confidence 99874321 22 24789999873 566777 77777766554
No 226
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=6.3e-15 Score=170.65 Aligned_cols=291 Identities=15% Similarity=0.159 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCC-CCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~-~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.++|+++++.....++.+||+++++++++.+|.|...+|. .++.+||. ..++||....+....|-
T Consensus 84 ~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 163 (408)
T PRK04612 84 PLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP 163 (408)
T ss_pred HHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 34677888887753334578899999999999999988654442 13455664 66799987665433221
Q ss_pred ---EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc---CHHHHHHHHHHcCCEEEEEccccccccC
Q 001990 703 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVG 775 (985)
Q Consensus 703 ---~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~g 775 (985)
.+..+|. .|+++++++++ .+++++|+++-.+ ..|++.+ .+++|.++|+++|+++|+|+++. +
T Consensus 164 ~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g--- 232 (408)
T PRK04612 164 LPGGFRYVDF-----NDVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-G--- 232 (408)
T ss_pred CCCCceEcCC-----CCHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C---
Confidence 1222332 38899999886 2455655554323 3455553 29999999999999999999874 2
Q ss_pred CCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccc
Q 001990 776 LTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (985)
Q Consensus 776 ~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~ 847 (985)
+.+.|. .-+|++++ .|.++ +|..+|.+.+++++.+.+..... .. ++.
T Consensus 233 ~gr~G~~~a~~~~~~~pdi~t~--~K~l~-----~G~piga~~~~~~~~~~~~~~~~--------------~~----t~~ 287 (408)
T PRK04612 233 MGRTGTLFAHWQEQVTPDIVTL--AKALG-----GGFPIGAMLAGPKVAETMQFGAH--------------GT----TFG 287 (408)
T ss_pred CCcCCchhhhhhcCCCCCEEEE--cchhc-----CCCceEEEEECHHHHhhhcCCCc--------------CC----CCC
Confidence 222322 12576655 47773 34567888878776655432100 01 112
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccccCCCCHHH
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~~~~ 922 (985)
|++..++++.+.|..+.++.+ .++...+.++|.++|++. +++. ..|. + .+ +-+.+.. ........
T Consensus 288 ~~p~~~aaa~a~L~~~~~~~l---~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-G-l~--~~i~~~~---~~~~~a~~ 357 (408)
T PRK04612 288 GNPLAAAVARVALRKLASPQI---AANVARQSAALRAGLEALNAEFGVFAQVRGR-G-LM--LGAVLAP---AHAGQAGA 357 (408)
T ss_pred CCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-c-eE--EEEEecC---chhhHHHH
Confidence 345556666777777755443 456667778888888752 3322 1221 1 12 1222210 00113567
Q ss_pred HHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 923 l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+.+.|.++|+.+.... ++.||++|+...|++||| +++++|++.+.++.
T Consensus 358 i~~~l~~~Gvlv~~~g---~~~lRl~Ppl~it~eeid---~~l~~l~~~l~~~~ 405 (408)
T PRK04612 358 ILDLAAEHGLLLLQAG---PDVLRFVPALNLTDAELA---DGLARLRLALADYV 405 (408)
T ss_pred HHHHHHHCCeEEeeCC---CCEEEEcCCccCCHHHHH---HHHHHHHHHHHHHh
Confidence 8889999999974322 378999999999999999 99999999887643
No 227
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.70 E-value=6.8e-16 Score=184.76 Aligned_cols=283 Identities=12% Similarity=0.087 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHH-HHHhhcCCCeEEEEeCc-
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI-CITRADGFDIKVVVSDL- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~-~~~~a~~~gi~v~~~~~- 288 (985)
..+.|+|+.+|+++|++.+.+ +++|+|++..+++++.. . +||+||+++++|.|+... +. ..|.+.+++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyF-lvNGTS~gn~a~i~a~~-~--~Gd~VLvdRN~HKSv~hgaLi----LsGa~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYF-VLNGTSASNKVVTNALL-T--PGDLVLFDRNNHKSNHHGALI----QAGATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----HcCCeEEEeecc
Confidence 457889999999999998766 78899999999988763 3 899999999999999975 43 24777877643
Q ss_pred ------------hh-----hhc-cC---CC-------EeEEEEEcCCCCeeeccHHHHHHH-HHhCCcEEEEE----ecc
Q 001990 289 ------------KD-----IDY-KS---GD-------VCGVLVQYPGTEGEVLDYGDFIKN-AHANGVKVVMA----TDL 335 (985)
Q Consensus 289 ------------~~-----l~~-l~---~~-------t~~V~v~~pn~~G~i~dl~~I~~~-a~~~galliV~----a~~ 335 (985)
++ +++ +. ++ .++|++|+|||+|.+.|+++|+++ +|.++ .++|| ++.
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 22 443 31 22 689999999999999999999999 68888 88884 222
Q ss_pred ccccC----CCCCCcccce----EEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccc
Q 001990 336 LALTI----LKPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (985)
Q Consensus 336 ~alg~----l~~p~~~GaD----i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~t 406 (985)
..... .....+.|+| +++.|. |.|+. ++ ++++++++..+++ | .+.| +
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lT----QaS~LHvk~~~i~-------g-------~~~~-v---- 380 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FS----QTSQIHKKDNHIK-------G-------QARY-C---- 380 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hh----hHhhhhcCCcccc-------c-------cccc-C----
Confidence 11121 1122578999 999999 66643 22 4567777654321 1 0000 0
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHH--HHc-CcchHHHHHHHHHHHHHHHHHHH-hcCCCEEEcCC----------
Q 001990 407 REQHIRRDKATSNICTAQALLANMAAMYA--VYH-GPEGLKTIAQRVHGLAGTFALGL-KKLGTVEVQGL---------- 472 (985)
Q Consensus 407 re~~~rre~atsni~t~~~l~a~~aa~y~--~~~-g~~Gl~~i~~~~~~~a~~l~~~L-~~~g~~~~~~~---------- 472 (985)
.+.|...+-.-.-|+++.|.++||+-. .++ ++.| +++.++..+++..+|++| +.+.+++++.+
T Consensus 381 --~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~ 457 (720)
T PRK13578 381 --PHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQD 457 (720)
T ss_pred --CHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeeccccccccccccc
Confidence 011111122223356889999999832 222 2234 567788889999999998 55544777621
Q ss_pred -------------------C------------Ccce--EEEecCC--------------HHHHHHHHHHcCceeeeecCC
Q 001990 473 -------------------P------------FFDT--VKVKCAD--------------AHAIASAAYKIEMNLRVVDSN 505 (985)
Q Consensus 473 -------------------~------------~~~~--~~i~~~~--------------~~~l~~~L~~~Gi~~~~~~~~ 505 (985)
. ..++ ++|.+++ +..+.+.|+++||.++..+..
T Consensus 458 ~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~ 537 (720)
T PRK13578 458 YPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLN 537 (720)
T ss_pred CchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCC
Confidence 0 1233 4454443 378999998889999988889
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 001990 506 TVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 506 ~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+++-++..+|++++++|+++|..
T Consensus 538 ~vL~l~s~g~t~~~~~~Lv~aL~~ 561 (720)
T PRK13578 538 SILFLLTPAEDMAKLQQLVAMLAR 561 (720)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999974
No 228
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.70 E-value=3.1e-15 Score=170.70 Aligned_cols=297 Identities=15% Similarity=0.180 Sum_probs=182.4
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Ccc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+..|. +.. .+..++|++. +..++++.+. ..| .++++|+++.+.|..+...++..|+++
T Consensus 36 ~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~--ai~~~~~~~~-~~g-~~~d~Vl~~~p~y~~~~~~~~~~g~~~ 111 (350)
T TIGR03537 36 LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE--AIFHFPLVFI-DPE-EDRRRVIFGTPGYPVYERGALFAGGEP 111 (350)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHHc-CCC-CCCceEEEcCCCCcchHHHHHhcCCEE
Confidence 56666666667777666674 343 5666666542 2233333221 112 123689999988877777888999999
Q ss_pred EEEeCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccCCCC
Q 001990 705 VSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTS 778 (985)
Q Consensus 705 ~~v~~~~-~-g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~~~ 778 (985)
+.++.+. + ..+|+++++++++ ++++++++++| |++|.+. + +++|+++|+++|+++++|+++.....+-..
T Consensus 112 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~ 187 (350)
T TIGR03537 112 TAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGEPP 187 (350)
T ss_pred EEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCC
Confidence 9999863 3 4589999999987 67899999999 5899886 4 899999999999999999987421111000
Q ss_pred --CCcCCCc--EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHH
Q 001990 779 --PGYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 779 --~g~~g~D--i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
...++.| +++.|++|+|+. .|.++|+++.++++...+.... ....++++ .....
T Consensus 188 ~~~~~~~~~~~i~~~s~SK~~g~----~GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~~----~~~q~ 245 (350)
T TIGR03537 188 HSALEVGIENVLAFHSLSKRSGM----TGYRSGFVAGDEKLISFLRKLR--------------ANFGVASP----DFVQA 245 (350)
T ss_pred CchhhcCcCCEEEEeecccccCC----ccccceeeecCHHHHHHHHHHH--------------HhhccCCC----HHHHH
Confidence 1112223 667788898754 3678999988776654432100 00111111 01111
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCc
Q 001990 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (985)
Q Consensus 855 ~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~ 933 (985)
++.+.+. .++.+.+..++..++.+.+.+.|++ ++.+. .+.+.++ +.++++ .+.+..++++.|.++||.
T Consensus 246 ~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~--~~~g~~~--~~~~~~-----~~~~~~~l~~~L~~~gv~ 314 (350)
T TIGR03537 246 AAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYL--YPDATFY--LWVKVP-----SGIDAKDYALRLLENGIV 314 (350)
T ss_pred HHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeEEE--EEEECC-----CCCCHHHHHHHHHHCCEE
Confidence 1112221 1233444455566777788888876 44322 2212111 234554 135678999999999998
Q ss_pred cCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 934 GPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 934 ~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
+... .|. ..+++|+++. .++++++ +.++.|++
T Consensus 315 v~~g~~f~~~~~~~~Ri~~~--~~~~~~~---~~l~~~~~ 349 (350)
T TIGR03537 315 VAPGENFGSGEEGYVRVALV--PTLEECE---EALRLWER 349 (350)
T ss_pred EcCchhhCCCCCCEEEEEec--CCHHHHH---HHHHHHhc
Confidence 7532 232 2478999974 5677777 66666543
No 229
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.70 E-value=6e-15 Score=170.88 Aligned_cols=305 Identities=16% Similarity=0.154 Sum_probs=183.8
Q ss_pred hcHHHHHHHHHHHHHHHhCCC---ccc-eecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD---SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~---~~~-~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++...+|.. ... +++++++++...++. ... .++++|+++++.|+.+...++..|.+
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~---~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 138 (391)
T PRK07309 67 AGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT---AIL-----EPGDKVLLPAPAYPGYEPIVNLVGAE 138 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH---Hhc-----CCCCEEEEeCCCCcchHHHHHHcCCE
Confidence 465555555666665555652 223 444555555433332 221 36789999998887777778889999
Q ss_pred EEEEeCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-C-C-
Q 001990 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G-L- 776 (985)
Q Consensus 704 v~~v~~~~~-g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g-~- 776 (985)
++.++.+++ +.+|++++++++++..+++++|++++| |++|.+- .++++|+++|++||+++++|+++..-.. + .
T Consensus 139 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~ 218 (391)
T PRK07309 139 IVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218 (391)
T ss_pred EEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC
Confidence 999998654 479999999999754457899999998 5799864 2599999999999999999998742211 1 0
Q ss_pred CCCCcCCCc--EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHH
Q 001990 777 TSPGYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (985)
Q Consensus 777 ~~~g~~g~D--i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~ 854 (985)
.....+..| +++.|++|+|+.| |.++|++++++++++.+.... ... ..+.+ .....
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~~~~~~~~~------------~~~--~~~~~----~~~q~ 276 (391)
T PRK07309 219 VSIAEYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEFTAQLIKSH------------QYL--VTAAT----TMAQF 276 (391)
T ss_pred CCHHHhccCCEEEEecChhhccCc----cceeEEEEeCHHHHHHHHHHH------------hhc--ccCCC----hHHHH
Confidence 011111123 6778888988544 678999999887765432100 000 01111 11111
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH-HHCCC
Q 001990 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGF 932 (985)
Q Consensus 855 ~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L-~e~Gi 932 (985)
++..++.. +..-.....++..++++++.+.|++ ++.+. .+.+.++ +.++++. ..+.+..+++++| .++||
T Consensus 277 ~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~gg~~--~~~~l~~---~~~~~~~~~~~~l~~~~gv 348 (391)
T PRK07309 277 AAVEALTN-GKDDALPMKKEYIKRRDYIIEKMTDLGFKII--KPDGAFY--IFAKIPA---GYNQDSFKFLQDFARKKAV 348 (391)
T ss_pred HHHHHHhC-ChhHHHHHHHHHHHHHHHHHHHHHHCCCeec--CCCeeEE--EEEECCC---CCCCCHHHHHHHHHHhCCE
Confidence 12222221 1111222334456667888888876 43322 2212111 2234431 0123567788775 46899
Q ss_pred ccCCCC-C-C-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 933 HGPTMS-W-P-VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 933 ~~~~~~-~-p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.+.... | + .++.+|+++.. +.++++ ..++.|++++++.
T Consensus 349 ~v~pg~~f~~~~~~~iRi~~~~--~~~~l~---~~i~~l~~~~~~~ 389 (391)
T PRK07309 349 AFIPGAAFGPYGEGYVRLSYAA--SMETIK---EAMKRLKEYMEEH 389 (391)
T ss_pred EEeCchhhCCCCCCEEEEEecC--CHHHHH---HHHHHHHHHHHhh
Confidence 874322 2 2 24789999874 578888 8998888877654
No 230
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.70 E-value=7.1e-15 Score=170.95 Aligned_cols=303 Identities=14% Similarity=0.140 Sum_probs=188.7
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cc-cceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DS-FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~-~~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++++.+|. +. ..+..++| +++... +++.+. .++|+|+++.+.|..+...++..|.+
T Consensus 78 ~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~---~~~~l~-----~~Gd~Vlv~~P~y~~~~~~~~~~g~~ 149 (405)
T PRK06207 78 RGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL---AVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGE 149 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH---HHHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCE
Confidence 57677777888888888885 33 44444444 444432 233221 46789999998777777778889999
Q ss_pred EEEEeCC-----CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-c
Q 001990 704 IVSVGTD-----AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-V 774 (985)
Q Consensus 704 v~~v~~~-----~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~ 774 (985)
++.++.+ .+..+|+++|+++++ +++++|++++| |++|.+.+ ++++|+++|+++|+++++|+++..-. .
T Consensus 150 v~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~ 226 (405)
T PRK06207 150 MVPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD 226 (405)
T ss_pred EEEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 9999875 246799999999997 67889999999 57999872 48889999999999999999875311 1
Q ss_pred C--CCCCCcCCC--c--EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 775 G--LTSPGYIGA--D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 775 g--~~~~g~~g~--D--i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
+ ......+.. | +++.|++|+|+.| |.++|++++++++.+.+.... ....++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~~~--------------~~~~~~~~~~~ 288 (405)
T PRK06207 227 GTSYTHLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEKLQ--------------AIVSLRAAGYS 288 (405)
T ss_pred CCCCCchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHHHH--------------hHhccCCCHHH
Confidence 1 111111111 2 6778888988654 678999998877665442100 00011111111
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
+ .++..++.. +..-+.+..+...++++++.+.|++...+.+..+.+.. .+.++++. .+.+..++++.|.
T Consensus 289 q----~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~--fl~~~l~~----~~~~~~~~~~~l~ 357 (405)
T PRK06207 289 Q----AVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGS--YLFPRLPR----LAVSLHDFVKILR 357 (405)
T ss_pred H----HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeE--EEEEeCcc----cCCCHHHHHHHHH
Confidence 1 112222221 11223444555566677788888752122222222222 13345431 1246788999987
Q ss_pred -HCCCccCCCC-C--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 929 -DYGFHGPTMS-W--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 929 -e~Gi~~~~~~-~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
++||.+.... | +.++.+||+++. +.++++ ..++.|++++++.
T Consensus 358 ~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~---~al~rl~~~l~~~ 403 (405)
T PRK06207 358 LQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAV---AAAERIAQLIERY 403 (405)
T ss_pred HhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHH---HHHHHHHHHHHHh
Confidence 6799864321 2 235789999974 577777 7777777766554
No 231
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=1.5e-15 Score=173.47 Aligned_cols=282 Identities=13% Similarity=0.096 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~-~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++.+|+.+|++..++..+.|++. +..++++.+. .++ ++|+++.+.+..+...++..|++++.+|.++++
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~--~i~~~~~~~~-----~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADE--AIELLIRAFC-----EPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence 46888999999998877666666542 2223333331 245 789998886665556678899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc-CCEEEEEccccccccCCCCCC---cCCCc-EE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPG---YIGAD-VC 787 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~-g~lliVD~a~~~~~~g~~~~g---~~g~D-i~ 787 (985)
.+|++.+++ + +++++|++++| |++|.+. +.+++.++++.. ++++++|+++..-. ...... ..... ++
T Consensus 136 ~~~~~~l~~-~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~~~~vivDeay~~~~-~~~s~~~~~~~~~~~iv 208 (354)
T PRK04635 136 QLPLDYIEQ-L----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTPDAIVVVDEAYIEFC-PEYSVADLLASYPNLVV 208 (354)
T ss_pred CCCHHHHHh-c----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCCCcEEEEeCchHhhc-cCcchHHHHhhCCCEEE
Confidence 899999873 3 57889999999 5799998 788988888763 79999999974211 100100 01111 46
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+.|++|+|+. .|.++|++++++++++.+.... ...+++ .....++.+++...+.+.
T Consensus 209 ~~S~SK~~~l----~GlRlG~~i~~~~~~~~l~~~~--------------~~~~~~------~~~~~~a~~~l~~~~~~~ 264 (354)
T PRK04635 209 LRTLSKAFAL----AGARCGFTLANEELIEILMRVI--------------APYPVP------LPVSEIATQALSEAGLAR 264 (354)
T ss_pred EechHHHhhh----hHHHHhhhhCCHHHHHHHHhhc--------------CCCCCC------HHHHHHHHHHHhcccHHH
Confidence 6788888853 4678999999887765542110 000111 011122233333222233
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CCCCCEEE
Q 001990 868 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLM 946 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~pv~~~lr 946 (985)
+.+..+...++++++.+.|++...+.+..+++. .+.++++ +..++.+.|.++||.+.... ...++.+|
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~---f~~~~~~--------~~~~~~~~l~~~gv~v~~~~~~~~~~~lR 333 (354)
T PRK04635 265 MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGN---YVLAKFD--------DVDAVFKALWDAGIVARAYKDPRLANCIR 333 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCc---EEEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCeEE
Confidence 344445556667888888887211222222222 2344442 46788889999999875432 22357899
Q ss_pred EeccCCCCHHhhchHHHHHHHHHHH
Q 001990 947 IEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 947 is~t~~~t~eeId~~~~~i~aL~~i 971 (985)
||+ .+.+|++ +|+++|++-
T Consensus 334 is~---~~~e~~~---~l~~al~~~ 352 (354)
T PRK04635 334 FSF---SNRAETD---KLIGLIRNQ 352 (354)
T ss_pred EEe---CCHHHHH---HHHHHHHHh
Confidence 997 6899999 999999753
No 232
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=8.5e-15 Score=171.65 Aligned_cols=299 Identities=14% Similarity=0.113 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHhC-CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhcC--------c
Q 001990 633 MFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M 702 (985)
Q Consensus 633 ~~~el~~~la~l~G-~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~G--------~ 702 (985)
...++.+.|+++++ .....++.+||++++++++..+|.| .++++|| +...+||.....+...+ .
T Consensus 87 ~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 160 (433)
T PRK08117 87 SILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHV------TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYY 160 (433)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHh------cCCCeEEEECCCcCCcCHHHHhhcCCCccccccC
Confidence 35678899999983 2234567799999999999988876 2345565 46688998766543221 0
Q ss_pred -----EEEEEeCCCCCC------------CCHHHHHHHHHh--cCCCeEEEEEEcC-CCccccccC----HHHHHHHHHH
Q 001990 703 -----KIVSVGTDAKGN------------INIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHD 758 (985)
Q Consensus 703 -----~v~~v~~~~~g~------------iDle~L~~~i~~--~~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~ 758 (985)
.+..+|...... .|++++++.+++ .++++++|+++.. +..|.+. + +++|.++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~-~~~~~l~~l~~lc~~ 239 (433)
T PRK08117 161 QPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIV-PPKSFLKKLREICDR 239 (433)
T ss_pred CCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCcc-CCHHHHHHHHHHHHH
Confidence 123344321111 267788888764 2356777777643 4567776 5 9999999999
Q ss_pred cCCEEEEEccccccccCCCCCC------cCC--CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC
Q 001990 759 NGGQVYMDGANMNAQVGLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (985)
Q Consensus 759 ~g~lliVD~a~~~~~~g~~~~g------~~g--~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~ 830 (985)
||+++++|++|. ++ .+.| .+| +|++++ .|.++ +|..+|++++++++.+.+.....
T Consensus 240 ~g~llI~DEv~t-G~---gr~G~~~~~~~~gv~pDi~t~--sK~lg-----~G~pigav~~~~~i~~~~~~~~~------ 302 (433)
T PRK08117 240 HGILLIFDEVQT-GF---GRTGEWFAAQTFGVVPDIMTI--AKGIA-----SGLPLSAVVASKELMEQWPLGSH------ 302 (433)
T ss_pred cCCEEEEecchh-cc---CccccchhHhhcCCCCCEeeh--hhhcc-----CCCcceeEEEcHHHHhhccCCCC------
Confidence 999999999985 32 2222 122 576543 47773 34457778888777654431110
Q ss_pred CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeEcCCCCceeEEEEE
Q 001990 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIV 907 (985)
Q Consensus 831 ~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~~~g~~~~~~~~~vv 907 (985)
+ +++.|++..++++.+.|..+..+++ .++...+.++++++|++. +.+....+....+ +-+
T Consensus 303 -------~-----~T~~~np~~~aaa~a~L~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~--~gi 365 (433)
T PRK08117 303 -------G-----TTFGGNPVACAAALATLEVIKEEKL---LDNANEMGAYALERLEVLKEKHPVIGDVRGIGLM--IGI 365 (433)
T ss_pred -------C-----CCCCcCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcE--EEE
Confidence 0 0122345556667777777655443 345566677888888652 3321111111111 112
Q ss_pred EecCcc-ccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 908 DLRGLK-NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 908 ~~~~~~-~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.+..-. .........+.+.|.++|+.+.... +..+.+|++|+..+|++||| ++++.|.++++++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~~~~lRl~p~~~~t~~~i~---~~~~~l~~~l~~~~ 431 (433)
T PRK08117 366 EIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG-NAGNVLRMIPPLTVTKEEID---EGLDILDEALTEYE 431 (433)
T ss_pred EEecCCCCcchHHHHHHHHHHHHCCCEEeecC-CCCCEEEEeCCccCCHHHHH---HHHHHHHHHHHHHh
Confidence 221000 0001124567888899999864322 11478999999999999999 99999999887653
No 233
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.70 E-value=3.3e-15 Score=170.95 Aligned_cols=271 Identities=20% Similarity=0.131 Sum_probs=184.4
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhh-
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID- 292 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~- 292 (985)
.++++.+|++.+ ..+.++.+|++++.+++.++ +. +||+||++...|..+...++..++..|+++++++.++..
T Consensus 54 ~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~ 127 (366)
T PRK07582 54 RALEAALGELEG---AEALVFPSGMAAITAVLRAL-LR--PGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE 127 (366)
T ss_pred HHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHh-cC--CCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH
Confidence 346789999993 34668888888877777665 33 889999999888777766554455689999999875432
Q ss_pred ccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCCce
Q 001990 293 YKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHA 370 (985)
Q Consensus 293 ~l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~ 370 (985)
.+.+++++|++.+| |++|.+.|+++|+++||++|++++||. .++.+....|.++|+|++++|+ |++++|- |--+
T Consensus 128 ~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~-t~~~~~~~~p~~~g~Divv~S~sK~l~G~~---g~~~ 203 (366)
T PRK07582 128 AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDN-TTATPLGQRPLELGADLVVASDTKALTGHS---DLLL 203 (366)
T ss_pred HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEEC-CCCCccccCchhcCCcEEEecccccccCCC---CeeE
Confidence 24468999999998 689999999999999999999999952 3322223356679999999998 8775432 2225
Q ss_pred EEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHH
Q 001990 371 AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (985)
Q Consensus 371 G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~ 449 (985)
|+++++ +++.+.+.. .++..|. +.+++ .+ |+...|-+-++.+.++
T Consensus 204 G~v~~~~~~l~~~l~~-------------------------~~~~~g~----~~~~~---~a--~l~~r~l~tl~~R~~~ 249 (366)
T PRK07582 204 GYVAGRDPELMAAVER-------------------------WRLLAGA----IPGPF---EA--WLAHRSLGTLGLRFAR 249 (366)
T ss_pred EEEEcCcHHHHHHHHH-------------------------HHHHhCC----CCCHH---HH--HHHHhccccHHHHHHH
Confidence 888875 455444310 0011010 11122 11 2344444556777788
Q ss_pred HHHHHHHHHHHHhcCCCEEEc--C----CC-----------CcceEEEecCCHHHHHHHHHHcCceee--------e---
Q 001990 450 VHGLAGTFALGLKKLGTVEVQ--G----LP-----------FFDTVKVKCADAHAIASAAYKIEMNLR--------V--- 501 (985)
Q Consensus 450 ~~~~a~~l~~~L~~~g~~~~~--~----~~-----------~~~~~~i~~~~~~~l~~~L~~~Gi~~~--------~--- 501 (985)
+.+++..++++|++...++-+ + .| +...|+|.+++.+++.+.|...++... .
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchhh
Confidence 889999999999987545432 1 12 223577777565566666666666431 1
Q ss_pred --------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 502 --------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 502 --------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
..++.||+|++..++++.|++|.++|.
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 124679999999999999999999986
No 234
>PRK05965 hypothetical protein; Provisional
Probab=99.70 E-value=1e-14 Score=171.29 Aligned_cols=314 Identities=15% Similarity=0.133 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|++++..+. ..++.+||+++++++++.+|.|...+|.+++.+||. ..++||..-.+....|.
T Consensus 92 ~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~ 171 (459)
T PRK05965 92 AIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDL 171 (459)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCC
Confidence 4478888888874221 246779999999999999998876555444667775 66889976443222111
Q ss_pred ---EEEEEeCCCC----CCCC--------HHHHHHHHHhcC-CCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCE
Q 001990 703 ---KIVSVGTDAK----GNIN--------IEELRKAAEANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQ 762 (985)
Q Consensus 703 ---~v~~v~~~~~----g~iD--------le~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~l 762 (985)
.+..++.... ...| ++++++.++++. +++++|+++-. ...|++.+ -+++|.++|++||++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gil 251 (459)
T PRK05965 172 PLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGIL 251 (459)
T ss_pred CCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1223332110 0123 367888887543 67888888743 34566653 389999999999999
Q ss_pred EEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCC
Q 001990 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (985)
Q Consensus 763 liVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~ 834 (985)
+|+|+++ .|+.+.|++ -+|+++++ |.++ +|--.+|.+++++++.+.+.... +
T Consensus 252 lI~DEV~----tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~----gG~~Pi~av~~~~~i~~~~~~~~-----~----- 311 (459)
T PRK05965 252 FVADEVI----TGFGRTGPLFACEAEGVVPDLMTVA--KGLT----SGYVPMGAVLMSDHVYQGIADGA-----G----- 311 (459)
T ss_pred EEEechh----ccCccCchhhhHhhcCCCCCeEEec--hhhc----cCCcceeEEEEcHHHHHHHhccc-----c-----
Confidence 9999876 345455433 27998763 7763 33223677778877765442110 0
Q ss_pred CCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEec
Q 001990 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR 910 (985)
Q Consensus 835 ~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~~ 910 (985)
. .+.....+++.|+++.++++.+.|..+.++++. ++..+..++|.++|++. +.++ +.|. + .+ +.+.+.
T Consensus 312 ~-~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-G-l~--~gie~~ 383 (459)
T PRK05965 312 A-AAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLL---ANGQKAGPRFAAGLDALRAHPLVGDVRGR-G-LL--GALELV 383 (459)
T ss_pred c-cccccccCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhhccCCCEEEEeec-c-eE--EEEEEe
Confidence 0 000001123456777888888999888776654 45567778888888762 2211 1121 1 11 122221
Q ss_pred Ccc-ccCC--C---CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHccCC
Q 001990 911 GLK-NTAG--I---EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAGRV 981 (985)
Q Consensus 911 ~~~-~~~g--~---~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~~~ 981 (985)
.-. .... . -...+.+.+.++|+++.... .+.||++|....|++||| +++++|.++++++.+--+|
T Consensus 384 ~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g---~~~i~~~PpL~it~~ei~---~~~~~l~~~l~~~~~~~~~ 454 (459)
T PRK05965 384 ADKATKTPFDAALDPADRIFDRAYANGLVFRAFG---DGVLGFAPALCCTEGEFD---LIFERTRKTLDDVLADPDV 454 (459)
T ss_pred ccccccCCCCchhHHHHHHHHHHHhCCeEEEecC---CcEEEEECCCcCCHHHHH---HHHHHHHHHHHHHhcCcch
Confidence 000 0000 0 13467778889999875322 367999999999999999 9999999999877544333
No 235
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.69 E-value=5.8e-16 Score=176.76 Aligned_cols=296 Identities=11% Similarity=0.033 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHHHhCCCc-c--ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCc
Q 001990 630 YQEMFNNLGEWLCTITGFDS-F--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 702 (985)
Q Consensus 630 ~~~~~~el~~~la~l~G~~~-~--~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~ 702 (985)
+.+.++++++.+++++|.+. . .+..+||+.+.+++ +.++. .++ .++++|++. .+.. .++..|+
T Consensus 42 ~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~---~~~l~-~~~-~~~~~i~~g-----~~~~~~~~~a~~~g~ 111 (355)
T cd00611 42 FEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAV---PLNLL-GDK-GTADYVVTG-----AWSAKAAKEAKRYGG 111 (355)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHH---HHhcC-CCC-CeEEEEECC-----HHHHHHHHHHHhcCC
Confidence 44678899999999999743 2 23335577655443 33332 112 234444442 2222 3567799
Q ss_pred EEEEEeCCCCCCC-C-HHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC
Q 001990 703 KIVSVGTDAKGNI-N-IEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (985)
Q Consensus 703 ~v~~v~~~~~g~i-D-le~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~ 779 (985)
++++++++++|.. + ++..+..++ +++++|.+++. |.+|+.. . ++++.+|++++||++|+.+...+ +.
T Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~---~---~i~~~~g~~~~VDa~qs~g~~~i-dv 181 (355)
T cd00611 112 VVVIVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEF---D---EVPDTGGVPLVADMSSNILSRPI-DV 181 (355)
T ss_pred CcEEEecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEc---c---eecccCCCeEEEEccccccCCCC-CH
Confidence 9999998655433 4 233333344 78898988875 5689864 2 34455999999999998766554 33
Q ss_pred CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccC--CCCCCCCCCCCCCCcccccchhhhHHHHHH
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST--GGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~--~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
.+++ +++.++||+| |.||+|++++++++.+.+++...... ..........+|+|+.. +.+..
T Consensus 182 ~~~~--~~~ss~~K~l------GP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~--------i~~L~ 245 (355)
T cd00611 182 SKFG--VIYAGAQKNL------GPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFA--------IYMMG 245 (355)
T ss_pred HHhC--EEEeeccccc------CCCceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHH--------HHHHH
Confidence 4444 5556689977 34689999999887765543211100 00000001123444331 12223
Q ss_pred HHHHHhchh-hHHHHHHHHHHHHHHHHHHHhccCCee-Ec-CCCCceeEEEEEEecCccccCCC-CHHHHHHHHHHCCCc
Q 001990 858 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPIL-FR-GVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGFH 933 (985)
Q Consensus 858 a~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~~~~i~-~~-g~~~~~~~~~vv~~~~~~~~~g~-~~~~l~~~L~e~Gi~ 933 (985)
+++..+.++ |+.++.++..+++++++++|++..++. .. .+..+....+.|.+. +. ...++.+.+.+.|++
T Consensus 246 aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~------~~~l~~~~~~~~~r~G~~ 319 (355)
T cd00611 246 LVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLG------KEELEKEFLKEAEAAGMI 319 (355)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcC------ChhhhHHHHHHHHHCCCc
Confidence 445555566 688888889999999999998732321 11 111111112334433 22 124444567779998
Q ss_pred cCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 934 GPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 934 ~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
++... ...+.+|+|+..++|+|||| +|+++|+++
T Consensus 320 ~~~~~-~~~g~vR~S~~~~nt~edi~---~l~~al~~~ 353 (355)
T cd00611 320 GLKGH-RSVGGIRASIYNALSLEGVQ---ALADFMKEF 353 (355)
T ss_pred ccCCC-cccCeEEEEccCCCCHHHHH---HHHHHHHHH
Confidence 54322 12488999999999999999 999999885
No 236
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1e-14 Score=170.94 Aligned_cols=301 Identities=16% Similarity=0.197 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC--------c-
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------M- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------~- 702 (985)
..++.+.|+++++.+ ...++.+||+++++++++.+|.| +++.+||. ...+||....+....| +
T Consensus 98 ~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 171 (457)
T PRK05639 98 AIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFS 171 (457)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCC
Confidence 447888888887643 23577899999999999988875 34566775 6689998765543322 1
Q ss_pred ----EEEEEeCCCCCC--------CCH--------HHHHHHHHh---cCCCeEEEEEEcC-CCcccccc---CHHHHHHH
Q 001990 703 ----KIVSVGTDAKGN--------INI--------EELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKI 755 (985)
Q Consensus 703 ----~v~~v~~~~~g~--------iDl--------e~L~~~i~~---~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~l 755 (985)
.++++|.+.... .|. +.+++.+.. .++++++|+++-. ...|++.+ -+++|.++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 245555532111 122 235554422 2467888888643 34566653 28999999
Q ss_pred HHHcCCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccC
Q 001990 756 IHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (985)
Q Consensus 756 a~~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~ 827 (985)
|++||+++|+|++|. |+.+.|.+ .+|++++ .|.++ +| -.+|.+++++++.+...+..
T Consensus 252 c~~~g~llI~DEv~t----G~GrtG~~~a~~~~gv~PDiv~~--gK~l~----gG-~pi~av~~~~~i~~~~~~~~---- 316 (457)
T PRK05639 252 LDEHGILLVMDEVQT----GIGRTGKWFASEWFEVKPDLIIF--GKGVA----SG-MGLSGVIGRKELMDLTSGSA---- 316 (457)
T ss_pred HHHcCCEEEEechhh----ccCcCchHHHHHhcCCCCCEEEe--chhhc----CC-CcceeEEehHHHHhhcCCCc----
Confidence 999999999999874 33344332 3799875 47763 33 44788888888776322110
Q ss_pred CCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCee--EcCCCCcee
Q 001990 828 GGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPIL--FRGVNGTVA 902 (985)
Q Consensus 828 ~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~--~~g~~~~~~ 902 (985)
. .++.|++..++++.+.|..+..+++. ++.....++|+++|++ .++++ ..|. + .+
T Consensus 317 --------------~-~T~~g~p~~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~-G-l~ 376 (457)
T PRK05639 317 --------------L-LTPAANPVISAAAEATLEIIEEENLL---KNALKVGEFIKKRLLEMKESFEVIGDVRGK-G-LM 376 (457)
T ss_pred --------------c-cCCCcCHHHHHHHHHHHHHHHHccHH---HHHHHHHHHHHHHHHHHHHhCCCEEeeccc-e-eE
Confidence 0 12234566677778888888766543 4555677888888875 23332 1221 1 11
Q ss_pred EEEEEEecC-ccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHccCC
Q 001990 903 HEFIVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAGRV 981 (985)
Q Consensus 903 ~~~vv~~~~-~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~~~ 981 (985)
+-+.+.. ...........+.+.|.++|+++..... ..+.||++|...+|++||| +++++|+++++++.+ ++|
T Consensus 377 --~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~-~~~~lr~~Ppl~it~~~id---~~~~~l~~~l~~~~~-~~~ 449 (457)
T PRK05639 377 --IGVEIVKENGKPDPELTGKICWRAFELGLILPSYGM-FGNVIRITPPLVITKEIAE---KGLEIMERAIKDALA-GKV 449 (457)
T ss_pred --EEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCC-CCCEEEEeCCCccCHHHHH---HHHHHHHHHHHHHHH-hhc
Confidence 1122210 0000001135678888999999854321 1478999999999999999 999999999987644 455
Q ss_pred C
Q 001990 982 G 982 (985)
Q Consensus 982 ~ 982 (985)
.
T Consensus 450 ~ 450 (457)
T PRK05639 450 E 450 (457)
T ss_pred c
Confidence 4
No 237
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.69 E-value=1.3e-14 Score=170.06 Aligned_cols=301 Identities=17% Similarity=0.160 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC--
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-- 711 (985)
+.++++.+++++|.+.+ +.+++|+.++..++.++. +++| ||++.+.+.++...+.+.|.+++.+++++
T Consensus 80 ~~~Lreaia~~~~~~~v-v~t~ggt~A~~~~~~all--------~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYPYT-IPTHQGRAAEQILFPVLI--------KKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCCcE-EECCCHHHHHHHHHHHhC--------CCCC-EEccCCcccchHHHHHHcCCEEEEEeccccc
Confidence 55788899999998764 566777777754444331 4778 88888766666666788999999999853
Q ss_pred --------CCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CCcc-ccc--cCHHHHHHHHHHcCCEEEEEcccccccc----
Q 001990 712 --------KGNINIEELRKAAEANR-DNLSTLMVTYP-STHG-VYE--EGIDEICKIIHDNGGQVYMDGANMNAQV---- 774 (985)
Q Consensus 712 --------~g~iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G-~i~--~di~eI~~la~~~g~lliVD~a~~~~~~---- 774 (985)
.|.+|+++|+++|++++ ++|++|++++| |.+| .+- .++++|+++|++||+++++|+|+.....
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIK 229 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhh
Confidence 24599999999998543 47999999998 5666 332 2588999999999999999998843111
Q ss_pred ----CC--CCCCc------CCCcEEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCC
Q 001990 775 ----GL--TSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (985)
Q Consensus 775 ----g~--~~~g~------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~ 841 (985)
+. ..... ...|++++|+||.+. +|.+|+++++ +++...+....+.. .+...
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~------~~~GG~i~~~d~~l~~~~~~~~~~~----------~g~~t 293 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM------VNIGGLLCFRDEDLFTECRTLCILY----------EGFPT 293 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCC------CcceeEEEcChHHHHHHhhhccccc----------CCccc
Confidence 10 01111 247999999999763 4545888888 46665553221110 00001
Q ss_pred cccccchhhhHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccc---cC
Q 001990 842 IAAAPWGSALILPISYT-YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKN---TA 916 (985)
Q Consensus 842 i~s~~~g~~~~~~~A~a-~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~---~~ 916 (985)
.+ |.......|.+ .+...-++. ..+....++++|.+.|++ ++.+.. +.+. +-+.+|+..+.. ..
T Consensus 294 ~~----g~~~~~~~Ala~~l~e~~~~~---~~~~~~~~~~~l~~~L~~~G~~~~~--p~Gg--~~v~~d~~~~~~~~~~~ 362 (460)
T PRK13238 294 YG----GLAGRDMEALAVGLYEGMDED---YLAYRIGQVEYLGEGLEEAGVPIQT--PAGG--HAVFVDAGKFLPHIPAE 362 (460)
T ss_pred cc----CcHHHHHHHHHhhHHHhhChH---HHHHHHHHHHHHHHHHHHCCCCeEc--cCCc--eEEEEEchhcCCCCCCC
Confidence 11 11222122222 222211222 222334467999999987 777653 2232 335677653310 11
Q ss_pred CCCHHHHHHHHH-HCCCccCC---CCCC-----------CCCEEEEeccC-CCCHHhhchHHHHHHHHHHHHHH
Q 001990 917 GIEPEDVAKRLM-DYGFHGPT---MSWP-----------VPGTLMIEPTE-SESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 917 g~~~~~l~~~L~-e~Gi~~~~---~~~p-----------v~~~lris~t~-~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+.+..+++..|. +.||.+.. ...+ ..+.+|+++.- .-|.+.+| ..++.|+++.++
T Consensus 363 ~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~---~~~~~l~~~~~~ 433 (460)
T PRK13238 363 QFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMD---YVAEALKAVKEN 433 (460)
T ss_pred CCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHH---HHHHHHHHHHHh
Confidence 234567887776 56887522 1111 13679999874 34889999 999999988754
No 238
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=3e-15 Score=172.63 Aligned_cols=281 Identities=18% Similarity=0.173 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~ 708 (985)
...++++.+++++|.+. .+.+++|+.+..+++ . .. .++++||+++..|+.... .++..|++++.++
T Consensus 55 ~~~~le~~lA~l~g~~~-~v~~~sG~~ai~~~l---~-~l-----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 55 TREALEDIIAELEGGTK-GFAFASGMAAISTAF---L-LL-----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred hHHHHHHHHHHHhCCCC-eEEECCHHHHHHHHH---H-Hh-----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 46688999999999885 456677776553332 2 11 367899999887764332 2456899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
.+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||+++..+. ...+.++|+|++
T Consensus 125 ~~-----d~~~l~~~l~---~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g~~vvvD~a~~~~~--~~~~~~~g~Div 193 (390)
T PRK08064 125 MT-----NLEEVAQNIK---PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIGCLTFVDNTFLTPL--LQKPLDLGADVV 193 (390)
T ss_pred CC-----CHHHHHHhcC---CCceEEEEECCCCCCcEec-cHHHHHHHHHHcCCEEEEECCCCccc--ccCchhhCCcEE
Confidence 73 7999999997 78999999999 5799998 89999999999999999999975432 234556899999
Q ss_pred EeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+.|+||+|+.+. |-..|+++++ +++.+.+.... ...+... ....+|. ...|-+
T Consensus 194 v~S~tK~~~G~~---~~laG~~v~~~~~~~~~l~~~~-------------~~~g~~~--------~~~~a~l--~~~gl~ 247 (390)
T PRK08064 194 LHSATKFLAGHS---DVLAGLAVVKDEELAQKLYFLQ-------------NSFGAVL--------GVQDCWL--VLRGLK 247 (390)
T ss_pred EeecceeccCCc---cceeEEEEeCCHHHHHHHHHHH-------------HhcCCCC--------CHHHHHH--HHcccC
Confidence 999999985321 1124777765 34544332100 0001111 1112333 223444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeEcCCCC------------ceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 867 GLTEASKIAILNANYMAKRLEKH---YPILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~~---~~i~~~g~~~------------~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
.+..+.++..+++..+.+.|++. ..+.+++-.+ .....+.|++. + .+++.+.+...+
T Consensus 248 tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~------~--~~~~~~f~~~l~ 319 (390)
T PRK08064 248 TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ------S--EEAVRQFVSHVK 319 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC------C--HHHHHHHHHhCC
Confidence 45567777888888999999862 2333333100 01112333332 2 334555555556
Q ss_pred Cc---c--CC----C---------CCC--------C-CCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 932 FH---G--PT----M---------SWP--------V-PGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 932 i~---~--~~----~---------~~p--------v-~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
+. + +. + ..| + ++.||+|++..++++.|+ .|.++|+++
T Consensus 320 l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~---dl~~Al~~~ 383 (390)
T PRK08064 320 LPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIA---DFEQALSYV 383 (390)
T ss_pred cceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHH---HHHHHHHhc
Confidence 52 1 10 0 011 2 478999999999999998 888888764
No 239
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.69 E-value=7.3e-15 Score=171.73 Aligned_cols=304 Identities=19% Similarity=0.212 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhC--CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC---------
Q 001990 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------- 701 (985)
Q Consensus 634 ~~el~~~la~l~G--~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------- 701 (985)
..++.+.|++++. .+ ..++.+||+++++++++.+|.|...+|..++.+||. ..++||....++...|
T Consensus 91 ~~~la~~l~~~~p~~~~-~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~ 169 (442)
T PRK13360 91 AFELANRIAEIAPGGLN-HVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFG 169 (442)
T ss_pred HHHHHHHHHHhCCCCCC-EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccC
Confidence 4478888888874 33 347789999999999999998754444323566775 6688997654432111
Q ss_pred ---cEEEEEeCCCC-----CC--------CCHHHHHHHHHhc-CCCeEEEEEEcC-CCccccccC----HHHHHHHHHHc
Q 001990 702 ---MKIVSVGTDAK-----GN--------INIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDN 759 (985)
Q Consensus 702 ---~~v~~v~~~~~-----g~--------iDle~L~~~i~~~-~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~ 759 (985)
..+..+|...+ .. -++++|++++..+ .+++++|+++.. +..|.+. + +++|.++|++|
T Consensus 170 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~-~~~~fl~~lr~lc~~~ 248 (442)
T PRK13360 170 ALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLI-PPKGYLQRLREICDKH 248 (442)
T ss_pred CCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCcc-CCHHHHHHHHHHHHHc
Confidence 12333443211 00 0256888888644 256777777643 4567776 5 99999999999
Q ss_pred CCEEEEEccccccccCCCCCCc------C--CCcEEEeCCcccccccCCCC-CCcceeeeecccccCcCCCCccccCCCC
Q 001990 760 GGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (985)
Q Consensus 760 g~lliVD~a~~~~~~g~~~~g~------~--g~Di~~~s~hKtl~~p~g~G-GPg~G~l~~~~~l~~~lpg~~~g~~~~~ 830 (985)
|+++|+|++|. + +.+.|. + .+|++++ .|.++ +| -| +|.+.+++++.+.+...... .
T Consensus 249 g~llI~DEv~t-G---~GrtG~~~a~~~~gv~PDivt~--gK~l~----gG~~P-~gav~~~~~i~~~~~~~~~~--~-- 313 (442)
T PRK13360 249 GILLIFDEVIT-G---FGRLGAPFAAQYFGVTPDLLTC--AKGLT----NGAIP-MGAVFVSSEIHDAFMQGPEA--G-- 313 (442)
T ss_pred CCEEEEechhh-C---CCCCccchhhhhcCCCCceeee--eeccc----cCccc-eEEEEEcHHHHHHhhcCCcc--c--
Confidence 99999999873 2 222222 1 3688765 47763 33 25 45566777766543211000 0
Q ss_pred CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeE--cCCCCceeEEEE
Q 001990 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILF--RGVNGTVAHEFI 906 (985)
Q Consensus 831 ~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~--~g~~~~~~~~~v 906 (985)
.... ..+++.|+++.++++.+.|..+.++++. ++..++.++|++.|++. +..+. .|. +. +. .
T Consensus 314 ----~~~~---~~~T~~g~pl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl-~~--~ 379 (442)
T PRK13360 314 ----IEFF---HGYTYSGHPLACAAALATLDLYEREGLL---TRAARLAPYWEDALHSLRDAPHVIDIRNL-GL-VG--A 379 (442)
T ss_pred ----cccc---cCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhhcCCCeeeeecc-ce-EE--E
Confidence 0000 0112345667777788888888766544 45667778888888751 22211 111 11 11 1
Q ss_pred EEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 907 VDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 907 v~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+.+............++.+.|.++|+++... .+.+|++|+..+|++||| +++++|.++++++
T Consensus 380 ~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----~~~lr~~Ppl~~t~~eid---~~~~~l~~~l~~~ 441 (442)
T PRK13360 380 VELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----GDILALSPPLIIEEAQID---ELFDILAQALKET 441 (442)
T ss_pred EEEecCCCCcchhHHHHHHHHHHCCcEEEec----CCEEEEeCCCccCHHHHH---HHHHHHHHHHHHh
Confidence 2221100000113457888899999987532 367999999999999999 9999999888653
No 240
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.69 E-value=7.3e-15 Score=166.53 Aligned_cols=311 Identities=16% Similarity=0.143 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHcCC--CccceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCC
Q 001990 151 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM 228 (985)
Q Consensus 151 ~e~~~~~~~~~~~n--~~~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~ 228 (985)
.+.++|+++--+.+ ...++|||...+|....+... .+.. |+ |..+...++++.+|+++|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~~~~-~~~~-------~~--------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEEDLE-LLET-------YV--------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHHHHH-HHHH-------hc--------CCHHHHHHHHHHHHHHcCCCc
Confidence 45677777655555 468899999987766555543 3222 21 344777889999999999988
Q ss_pred cceeeccchHHHHHHHHHHhhhhcCCCCEEEEc---CCCChhHHHHHHHhhcCCCeEEEEe-CchhhhccCCCEeEEEEE
Q 001990 229 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA---SNCHPQTIDICITRADGFDIKVVVS-DLKDIDYKSGDVCGVLVQ 304 (985)
Q Consensus 229 ~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~---~~~h~s~~~~~~~~a~~~gi~v~~~-~~~~l~~l~~~t~~V~v~ 304 (985)
.++.+++||+.+..+++.++. . +||+|+++ ...|+++...++. .|.++... ++++++. .+++++|+++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~-~--~gd~Vli~~~d~p~~~s~~~~~~l----~ga~~~~~~~l~~l~~-~~~~~lIiit 143 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALE-P--PGRKVVHYLPEKPAHPSIPRSCKL----AGAEYFESDELSELKK-IDGTSLVVIT 143 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhC-C--CCCEEEECCCCCCCchhHHHHHHH----cCCEEeccCCHHHHhh-CcCceEEEEE
Confidence 889999999988888877763 3 88999874 4699998887653 46665432 3444432 3567888888
Q ss_pred cCCCCeee---ccHHHHHHHHHhCCcEEEEEeccccccCCC-----CCCcccceEEEecC-ccccccCCCCCCceEEEEE
Q 001990 305 YPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT 375 (985)
Q Consensus 305 ~pn~~G~i---~dl~~I~~~a~~~galliV~a~~~alg~l~-----~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~ 375 (985)
.++++|.+ .|+++|+++|+++|++++|| +.++.+... +..++|+|+++++. |+++ |+-.||+++
T Consensus 144 g~s~~G~v~~~~~L~~i~~la~~~~~~livD-EAy~~~~~~~~~~~~~~~~~~divv~s~SKala------G~r~G~v~~ 216 (346)
T TIGR03576 144 GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVD-DASGARVRRLYGQPPALDLGADLVVTSTDKLMD------GPRGGLLAG 216 (346)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEEE-CCccccccccCCCCCHHHcCCcEEEeccchhcc------ccceEEEEe
Confidence 77889998 79999999999999999994 455544321 11346789999987 8553 455689999
Q ss_pred chhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCC-CccchhH-HHHHHHHHHHHHcCcchHHHHHHHHHHH
Q 001990 376 SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS-NICTAQA-LLANMAAMYAVYHGPEGLKTIAQRVHGL 453 (985)
Q Consensus 376 ~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~ats-ni~t~~~-l~a~~aa~y~~~~g~~Gl~~i~~~~~~~ 453 (985)
++++++.|.. ...+ .+|.+.+ ..+..+++ ..+ ..+.+.+...++
T Consensus 217 ~~~li~~l~~-----------------------------~~~~~~~s~~~~~~~aa~~aL--~~~---~~~~~~~~l~~r 262 (346)
T TIGR03576 217 RKELVDKIKS-----------------------------VGEQFGLEAQAPLLAAVVRAL--EEF---ELSRIRDAFKRK 262 (346)
T ss_pred CHHHHHHHHH-----------------------------hhcCcccCccHHHHHHHHHHH--hhc---cHHHHHHHHHHH
Confidence 9888776510 0011 1111122 11222222 222 235566677777
Q ss_pred HHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee-----cCCeEEEEeccCC-CHHHHHHHH
Q 001990 454 AGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-----DSNTVTASFDETT-TLEDVDKLF 524 (985)
Q Consensus 454 a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~-----~~~~lris~~~~~-t~edid~ll 524 (985)
..++.+.++++ .+...+ .+=+-+++++ .+.+.+.|.++||.+... .++++|+|+.... ++.+.+.|+
T Consensus 263 ~~~~~~~l~~~---~~~~~~-~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~ 338 (346)
T TIGR03576 263 EEVYLRLFDKL---NVERTP-TGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLV 338 (346)
T ss_pred HHHHHHHHHhC---CCCcCC-CeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHH
Confidence 77777777743 333222 1112334442 345556666789987653 1579999998544 444899999
Q ss_pred HHHhCC
Q 001990 525 IVFAGG 530 (985)
Q Consensus 525 ~~l~~~ 530 (985)
++|+..
T Consensus 339 ~al~~~ 344 (346)
T TIGR03576 339 EAVKDS 344 (346)
T ss_pred HHHHhc
Confidence 999753
No 241
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=1.3e-15 Score=173.86 Aligned_cols=280 Identities=15% Similarity=0.127 Sum_probs=178.3
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~-~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++++++.+|++..++..++|++. +..++++.+. .++ ++|+++.+.|+.+...++..|++++.+|.++++
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e--~i~~~~~~~~-----~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~ 132 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADE--GIELLIRAFC-----EPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNW 132 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCC
Confidence 47888999999998877766666542 3333344331 243 789999887766666678899999999998788
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEccccccccCCCCC----CcCCCcE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSP----GYIGADV 786 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~~g~~~~----g~~g~Di 786 (985)
.+|++++++++ +++++|++++| |++|.+. +.+++.++++. .++++++|+++.. +...... ....-=+
T Consensus 133 ~~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~~n~i 206 (351)
T PRK01688 133 QLDLPAIADNL----DGVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYPHLV 206 (351)
T ss_pred CCCHHHHHHhc----cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhCCCEE
Confidence 99999999877 36889999999 5799998 66666666543 2689999999742 1111010 1111124
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++.|++|+|+ ..|.++|++++++++++.+.... ...++++ ....++.+++..-+.+
T Consensus 207 v~rSfSK~~g----laGlRiGy~i~~~~~i~~l~~~~--------------~~~~v~~------~~~~~a~~~L~~~~~~ 262 (351)
T PRK01688 207 ILRTLSKAFA----LAGLRCGFTLANEEVINLLLKVI--------------APYPLST------PVADIAAQALSPQGIA 262 (351)
T ss_pred EEecchHhhc----CHHHHHhHHhCCHHHHHHHHhcc--------------CCCCCCH------HHHHHHHHHHhcchHH
Confidence 5666677764 45778999999887765543210 0011111 1112222333221123
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-C-CCC
Q 001990 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-PVP 942 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~-pv~ 942 (985)
-+.+..+...++++++.+.|++. +...++. + .+.+.+++. +..++.+.|.++||.+.... + ..+
T Consensus 263 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps--~--~nfi~~~~~--------~~~~l~~~L~~~gi~vr~~~~~~~~~ 330 (351)
T PRK01688 263 AMRERVAEINANRQWLIAALKEIPCVEQVFDS--E--TNYILARFT--------ASSAVFKSLWDQGIILRDQNKQPGLS 330 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC--C--CcEEEEEcC--------CHHHHHHHHHHCCeEEEECCCcCCCC
Confidence 34444555667778888888762 2222221 1 222344442 46789999999999875432 2 245
Q ss_pred CEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 943 GTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 943 ~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
+++||+++ +++|++ +|+++|+
T Consensus 331 ~~iRis~~---~~~e~~---~l~~al~ 351 (351)
T PRK01688 331 NCLRITIG---TREECQ---RVIDALR 351 (351)
T ss_pred CeEEEeCC---CHHHHH---HHHHhhC
Confidence 88999985 789999 9999873
No 242
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.69 E-value=1.7e-15 Score=173.53 Aligned_cols=281 Identities=10% Similarity=0.109 Sum_probs=177.5
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~ 714 (985)
.++++.+++.+|++..++.+++|++. +..++++.+. .++++|+++.+.+..+...++..|++++.+|.+ ++.
T Consensus 67 ~~Lr~aia~~~~~~~~~I~vt~Gs~e--~i~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~ 138 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQVLCGSGLDE--VIQIISRAVL-----KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGV 138 (366)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCC
Confidence 46788899999998877666666541 2233333331 367899999886666666678899999999985 456
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHH---HHHcCCEEEEEcccccccc--CCCCC----CcCCC
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKI---IHDNGGQVYMDGANMNAQV--GLTSP----GYIGA 784 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~l---a~~~g~lliVD~a~~~~~~--g~~~~----g~~g~ 784 (985)
+|+++|+++++ +++++|++++| |++|.+. +.+++.++ |++++ ++++|+++..-.. ..... ...+-
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~P~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T PRK01533 139 YDLDEISSVVD---NDTKIVWICNPNNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKN 213 (366)
T ss_pred cCHHHHHHHhC---cCCcEEEEeCCCCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCC
Confidence 99999999987 67889999999 5799997 55555554 44544 6788998742110 00000 11122
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
-+++.|+.|+|++ .|.++|++++++++++.+.... ...+++ .....++.+++ .
T Consensus 214 vi~~~SfSK~~~l----~GlRiG~~i~~~~~~~~l~~~~--------------~~~~~~------~~~q~aa~~~l---~ 266 (366)
T PRK01533 214 ILVLRTFSKAYGL----ASFRVGYAVGHEELIEKLNVVR--------------LPFNVS------SLAQKAATIAF---G 266 (366)
T ss_pred EEEEeCchHHhcC----hHHHHhHHhCCHHHHHHHHHhc--------------CCCCcC------HHHHHHHHHHh---C
Confidence 3667777787754 4789999998877665442110 001111 11111222222 2
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCC
Q 001990 865 SKG-LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (985)
Q Consensus 865 ~~g-l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~ 942 (985)
... +.+..+...++.+++.+.|+. ++++. .+++ +.+.+.++ +..++.+.|.++||.+..+ +
T Consensus 267 ~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~--~~~~---nf~~~~~~--------~~~~~~~~l~~~GI~Vr~~----~ 329 (366)
T PRK01533 267 DDEFIEEIVRVNTEGLRQYESFCKENEIPFY--QSQT---NFIFLPVE--------NGGEIYEACAHAGFIIRPF----P 329 (366)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCCCccC--CCcC---cEEEEeCC--------CHHHHHHHHHHCCcEEccC----C
Confidence 222 333344445566666666665 44332 2222 22334442 4568999999999998652 4
Q ss_pred CEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 943 GTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 943 ~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
+++||++ .+.+|.+ +|+++|+++++.-++.
T Consensus 330 ~~iRis~---~~~~~~~---~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 330 NGVRITV---GTREQNE---GVISVLQQHFENKKRK 359 (366)
T ss_pred CceEEeC---CCHHHHH---HHHHHHHHHHHhcccc
Confidence 7899998 7889999 9999999987654443
No 243
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.3e-14 Score=169.89 Aligned_cols=304 Identities=17% Similarity=0.216 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc-------
Q 001990 633 MFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~------- 702 (985)
...++.+.|++++... ...++.+||++++++++..+|.| +++.+||. ...+||....++...+.
T Consensus 86 ~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~------tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~ 159 (445)
T PRK08593 86 PLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAY------TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRK 159 (445)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCCcHHHHhhcCCCcccccC
Confidence 3457888899988533 23577899999999999988876 23456665 66899987655433221
Q ss_pred ------EEEEEeCCCC-----CCCC-------HHHHHHHHHhc--CCCeEEEEEEcC-CCcccccc---CHHHHHHHHHH
Q 001990 703 ------KIVSVGTDAK-----GNIN-------IEELRKAAEAN--RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHD 758 (985)
Q Consensus 703 ------~v~~v~~~~~-----g~iD-------le~L~~~i~~~--~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~ 758 (985)
.+..+|.... +..+ ++++++.++++ .+++++|+++.. +..|++.+ -+++|.++|++
T Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~ 239 (445)
T PRK08593 160 YGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCRE 239 (445)
T ss_pred CCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 1334544221 1112 24555555432 367888888754 45677641 29999999999
Q ss_pred cCCEEEEEccccccccCCCCCCc------C--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC
Q 001990 759 NGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (985)
Q Consensus 759 ~g~lliVD~a~~~~~~g~~~~g~------~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~ 830 (985)
||+++|+|+++. ++.+.|. + .+|++++ .|.+ ++ |..+|++++++++.+.+.....
T Consensus 240 ~g~llI~DEv~t----g~GrtG~~~a~~~~gv~pDi~t~--gK~l----~~-G~p~gav~~~~~i~~~~~~~~~------ 302 (445)
T PRK08593 240 HGILFAVDDIQQ----GLGRTGKWSSISHFNITPDLMSF--GKSL----AG-GMPMSAIVGRKEIMESLEAPAH------ 302 (445)
T ss_pred cCCEEEEechhh----CCCcCchHHHHHhcCCCCCEeee--cccc----cC-CcccEEEEEcHHHHhhhccCCC------
Confidence 999999999873 2223332 1 3688765 4766 33 3347778888887765532100
Q ss_pred CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEE
Q 001990 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEF 905 (985)
Q Consensus 831 ~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~ 905 (985)
. . ++.|++..++++.+.|..+.++++ .++...+.++|++.|++. ++++ ..|. +. +..+
T Consensus 303 -------~-~----T~~~~pl~~aaa~a~l~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~gi 365 (445)
T PRK08593 303 -------L-F----TTGANPVSCAAALATIDMIEDESL---LQRSAEKGEYARKRFDQWVSKYNFVGDVRGY-GL-SIGI 365 (445)
T ss_pred -------C-C----CCCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhcCCcEEEEecc-ce-EEEE
Confidence 0 0 122355666667788877765543 445667778888888752 2322 1121 11 1111
Q ss_pred EEEecC-ccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHccCCCC
Q 001990 906 IVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAGRVGQ 983 (985)
Q Consensus 906 vv~~~~-~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~~~~~ 983 (985)
-+..+. .+.........+.+.|.++|+.+.... .+.+|++|+..+|++||| +++++|.++++++. .++++|
T Consensus 366 ~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---~~~lr~~p~l~~t~~~id---~~~~~l~~~l~~~~-~~~~~~ 437 (445)
T PRK08593 366 DIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA---GNVLRFQPPLVITYEQLD---TALNTIEQAFTALE-AGKLDQ 437 (445)
T ss_pred EEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---CCEEEEECCCccCHHHHH---HHHHHHHHHHHHHh-ccccCC
Confidence 111110 000000123568888999999875332 378999999999999999 99999999998754 356655
No 244
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.69 E-value=4.6e-15 Score=169.12 Aligned_cols=272 Identities=19% Similarity=0.155 Sum_probs=181.1
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
..+++.+|+|.|.+. +.++++|++|+.++++++. . +||+||+++..+..+...++.+...+|+++.++|. ++
T Consensus 58 ~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll-~--~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 58 RALEQRLAALEGGED--ALLFSSGMAAISAALLALL-K--PGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp HHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS----TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred HHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc-c--cCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 446789999999865 7789999999988888763 3 79999999999999999999888889999999987 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCC-cEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~g-alliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
+++ ++++|++|+++.| |++..+.||++|+++||++| ++++|| +.++.+++..|-++||||++.|+ |.+++. |
T Consensus 133 l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVD-nT~atp~~~~pL~~GaDivv~S~TKyl~Gh---s 208 (386)
T PF01053_consen 133 LEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVD-NTFATPYNQNPLELGADIVVHSATKYLSGH---S 208 (386)
T ss_dssp HHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEE-CTTTHTTTC-GGGGT-SEEEEETTTTTTTS---S
T ss_pred HHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEee-ccccceeeeccCcCCceEEEeeccccccCC---c
Confidence 555 7889999999998 88999999999999999999 999994 67777888889999999999998 877532 1
Q ss_pred CCceEEEEEch--hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHH
Q 001990 367 GPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (985)
Q Consensus 367 GP~~G~l~~~~--~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (985)
-=-+|.+.++. ++.+++. ..++.-| +.. ++. ..|+...|-+-+.
T Consensus 209 dv~~G~vv~~~~~~~~~~l~-------------------------~~~~~~G--~~~--~p~-----da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 209 DVMGGAVVVNGSSELYDRLR-------------------------EFRRLLG--ATL--SPF-----DAWLLLRGLRTLP 254 (386)
T ss_dssp SE-EEEEEESSHHHHHHHHH-------------------------HHHHHHT---B----HH-----HHHHHHHHHTTHH
T ss_pred ceeeEEEEECchhhhhhhhc-------------------------chhhhcC--ccc--hHH-----HHHHHhcCCCcHH
Confidence 11246777654 3433320 0011111 000 111 1233445556667
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC-HHHHHHHHHHcCce-----ee-
Q 001990 445 TIAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD-AHAIASAAYKIEMN-----LR- 500 (985)
Q Consensus 445 ~i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~-~~~l~~~L~~~Gi~-----~~- 500 (985)
-+.++..++|..+++.|++...++ |. +. | +..-|+|.+++ ..++.+.+..-.++ +.
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg 334 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGG 334 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCC
Confidence 777888899999999999985465 43 21 1 11357888776 32333333333332 10
Q ss_pred ---e---------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 501 ---V---------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 501 ---~---------------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
. +.++.+|+|++.-+.++=|+.|-++|+
T Consensus 335 ~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 335 VESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp SS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred cccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 0 124678999997766655666666653
No 245
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.69 E-value=8.8e-15 Score=170.04 Aligned_cols=301 Identities=16% Similarity=0.179 Sum_probs=182.6
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHh-hHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEE
Q 001990 180 VPPVILRNIMENPAWYTQYTPYQAEIA-QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (985)
Q Consensus 180 ~p~~v~~~i~~~~~~~t~~~py~~e~s-qg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~V 258 (985)
+|+.+.+++.+ ++..|++...... ..+-+.+.++++.+|+|+|++. +.+++++++++..++.++ . +||+|
T Consensus 93 l~~~vieAv~~---~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l--~--~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTD---AARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL--A--KGKEV 163 (454)
T ss_pred CCHHHHHHHHH---HHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh--C--CcCEE
Confidence 56666555543 3444542111111 1122446778899999999987 557888888776655443 3 88999
Q ss_pred EEcCCCChhH----HHHHHHhhcCCCeEEEEeCc------hhhhc-cCCCEeEEEEEcC-CC--Ce--eeccHHHHHHHH
Q 001990 259 IIASNCHPQT----IDICITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNA 322 (985)
Q Consensus 259 lv~~~~h~s~----~~~~~~~a~~~gi~v~~~~~------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~dl~~I~~~a 322 (985)
|+++.+|+++ .-+ ..++..|+++++++. +++++ ++++|++|++.++ |+ .| .+.|+++|+++|
T Consensus 164 Ivs~~e~v~~ggs~~i~--~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la 241 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIP--DVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALG 241 (454)
T ss_pred EECCChhhhhcchhhHH--HHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHH
Confidence 9999988543 222 123467999999864 45666 8899999988775 54 46 578999999999
Q ss_pred HhCCcEEEEEecccc-------ccC-----CCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceee
Q 001990 323 HANGVKVVMATDLLA-------LTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVG 389 (985)
Q Consensus 323 ~~~galliV~a~~~a-------lg~-----l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG 389 (985)
|++|++++||. ... +|+ +..+.++|||++++|+ |+| |||++|++++++++++++...-++
T Consensus 242 ~~~g~~vivD~-~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~ 314 (454)
T TIGR00474 242 REHGLPVMEDL-GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLT 314 (454)
T ss_pred HHcCCeEEEEC-CCcccccchhccCCCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhH
Confidence 99999999953 110 111 1234579999999999 665 456789999999888776321111
Q ss_pred eeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH--HH----HHcCcchHHHH---HHHHHHHHHHHHHH
Q 001990 390 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTI---AQRVHGLAGTFALG 460 (985)
Q Consensus 390 ~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~--y~----~~~g~~Gl~~i---~~~~~~~a~~l~~~ 460 (985)
|. .|-.| -.+.++.+++ |+ ++....|++.+ .+++.++|..++++
T Consensus 315 -----------------r~--lr~~k--------~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~ 367 (454)
T TIGR00474 315 -----------------RA--LRVDK--------LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKR 367 (454)
T ss_pred -----------------HH--HhhCh--------HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHH
Confidence 00 00011 0122222222 21 12223344333 34556678888888
Q ss_pred HhcC--CCE--EEcC-C--------C--CcceEE--EecCC--HHHHHHHHHHcCc--eeeeecCCeEEEEeccCCCHHH
Q 001990 461 LKKL--GTV--EVQG-L--------P--FFDTVK--VKCAD--AHAIASAAYKIEM--NLRVVDSNTVTASFDETTTLED 519 (985)
Q Consensus 461 L~~~--g~~--~~~~-~--------~--~~~~~~--i~~~~--~~~l~~~L~~~Gi--~~~~~~~~~lris~~~~~t~ed 519 (985)
|++. .++ ++.. . | ..+++. +...+ +.++.++|++... ..+ +..+.+.+-+-.. .++|
T Consensus 368 L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r-~~~~~~~ld~r~~-~~~~ 445 (454)
T TIGR00474 368 LKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGR-IEDDRFLLDLRTL-LEDE 445 (454)
T ss_pred HHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCcC-CHHH
Confidence 8763 123 3331 1 1 134444 44333 8899999997654 333 3456665554433 5677
Q ss_pred HHHHHHHH
Q 001990 520 VDKLFIVF 527 (985)
Q Consensus 520 id~ll~~l 527 (985)
++.+++.|
T Consensus 446 ~~~~~~~~ 453 (454)
T TIGR00474 446 EELLIEAL 453 (454)
T ss_pred HHHHHHHh
Confidence 88877765
No 246
>PLN02880 tyrosine decarboxylase
Probab=99.69 E-value=6.9e-15 Score=173.48 Aligned_cols=358 Identities=13% Similarity=0.054 Sum_probs=211.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHcCCC-cc--ceecCCCCCCCCCcHHHHHHHHhCCccccccCCC--hhhHhhHHHHHHH
Q 001990 140 KFSKFDEGLTESQMIEHMQKLASMNK-VY--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPY--QAEIAQGRLESLL 214 (985)
Q Consensus 140 ~lp~~~~~~se~e~~~~~~~~~~~n~-~~--~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py--~~e~sqg~l~~i~ 214 (985)
.+| +.+.+-.++++++.+.-..+. .+ ..|.|--.-+...++.+.+-+.+ +++.. .-+.+.+..+...
T Consensus 54 ~~p--~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~------~~n~~~~~~~~sp~~~~lE~ 125 (490)
T PLN02880 54 SAP--NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSA------GLNIVGFSWITSPAATELEM 125 (490)
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHH------hhccCCcccccCcccHHHHH
Confidence 455 466677899999987544332 11 22333221111234444322221 11211 1134555667777
Q ss_pred HHHHHHHHhhCCCCc-------ceeeccchHHHHHHHHHHhh-hh-c--C----CCCEEEEcCCCChhHHHHHHHhhcCC
Q 001990 215 NFQTMIADLTGLPMS-------NASLLDEGTAAAEAMAMCNN-IQ-K--G----KKKTFIIASNCHPQTIDICITRADGF 279 (985)
Q Consensus 215 e~q~~ia~L~g~~~~-------~~sl~~~~ta~~ea~~~a~~-~~-~--~----~g~~Vlv~~~~h~s~~~~~~~~a~~~ 279 (985)
+.-+++++|+|++.. ...+++|||.+.-.++++.| .. + + ++-.|++|+..|.|+.+.+..+ +.
T Consensus 126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l--Gl 203 (490)
T PLN02880 126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA--GI 203 (490)
T ss_pred HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc--CC
Confidence 888999999999864 35677777765433333322 11 0 0 1235668999999999997643 33
Q ss_pred Ce-EEEEeCc----------hhhhc-cC------CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccC
Q 001990 280 DI-KVVVSDL----------KDIDY-KS------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI 340 (985)
Q Consensus 280 gi-~v~~~~~----------~~l~~-l~------~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~ 340 (985)
|- .++.++. ++|++ +. ....+|+.+.+ +.+|.++|+++|+++|+++|++++||+ .++.+.
T Consensus 204 g~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDa-A~gg~~ 282 (490)
T PLN02880 204 HPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDA-AYAGSA 282 (490)
T ss_pred CHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEeh-hhHHHH
Confidence 31 1333322 34544 32 12567777877 469999999999999999999999953 223322
Q ss_pred CCC-------CCcccceEEEecC-ccccccCCCCCCceEEEEEchh--hHhcCC---CceeeeeecCCCCcce-EEeccc
Q 001990 341 LKP-------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP---GRIVGVSIDSSGKPAL-RVAMQT 406 (985)
Q Consensus 341 l~~-------p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~--~~~~lp---~~~vG~s~d~~g~~~~-~l~l~t 406 (985)
+.. .+-.+||.++.+. |+++.|.+ +|++++++. +.+.+. +.+.....+..+...+ .+.+
T Consensus 283 ~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i-- 355 (490)
T PLN02880 283 CICPEYRHYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI-- 355 (490)
T ss_pred HhCHHHHHHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc--
Confidence 222 2235799999999 77777764 688999852 222221 0000000000000000 0111
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC--
Q 001990 407 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-- 484 (985)
Q Consensus 407 re~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-- 484 (985)
+--||. .++ .+-.+ +..+|.+|++++.+++.++|+++.+.|++..+++++.++.++.++|+.+.
T Consensus 356 --~~~rr~---------~al-klw~~--l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~ 421 (490)
T PLN02880 356 --PLGRRF---------RSL-KLWMV--LRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPK 421 (490)
T ss_pred --CCCCcc---------cHH-HHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCC
Confidence 111221 111 11111 36899999999999999999999999988745999877667777776541
Q ss_pred ---------HHHHHHHHHHcCc-eeeee--c-CCeEEEEeccCCC-HHHHHHHHHHHhC
Q 001990 485 ---------AHAIASAAYKIEM-NLRVV--D-SNTVTASFDETTT-LEDVDKLFIVFAG 529 (985)
Q Consensus 485 ---------~~~l~~~L~~~Gi-~~~~~--~-~~~lris~~~~~t-~edid~ll~~l~~ 529 (985)
..++.++|.+.|. ++... . ...+|+|++..+| ++|++++++.+..
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 1345566665544 44332 2 3679999998776 5999999999975
No 247
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=5.8e-15 Score=168.48 Aligned_cols=282 Identities=17% Similarity=0.188 Sum_probs=183.6
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~ 714 (985)
.++++.++++++.+...+..++|++. +...+++.+. .++++|+++++.+..+...++..|.+++.++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~--~l~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDE--IIHLIMLAFI-----NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46888999999987766656566542 2222233321 4678999988766555555678999999999987788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCC---CCcCCCcEEEeC
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS---PGYIGADVCHLN 790 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~---~g~~g~Di~~~s 790 (985)
+|+++++++++. .++++|++++| |++|.+. +.+++.++|++++.++++|+++.. ..+-.. .....--+++.|
T Consensus 135 ~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVI-EREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEeCcchh-hcccchHHHhhhCCCEEEEec
Confidence 999999999972 37899999999 5899998 899999999998899999999842 111100 011222467788
Q ss_pred CcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHH
Q 001990 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (985)
Q Consensus 791 ~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~ 870 (985)
++|+|+. .|.++|+++.++++.+.+.... ...+++ ...+ .++..++. ...+.+
T Consensus 211 ~SK~~~~----~GlRiG~~v~~~~~~~~~~~~~--------------~~~~~~--~~~q----~~~~~~l~---~~~~~~ 263 (351)
T PRK14807 211 LSKAFGL----AGLRVGYAVANENILKYLNLVK--------------SPYNIN--SLSQ----VIALKVLR---TGVLKE 263 (351)
T ss_pred chHhccc----chhceeeeecCHHHHHHHHHcc--------------CCCCcC--HHHH----HHHHHHHh---HHHHHH
Confidence 8888854 4789999998877665442110 001111 1111 11222332 223444
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC--CCCCCEEEEe
Q 001990 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--WPVPGTLMIE 948 (985)
Q Consensus 871 ~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~--~pv~~~lris 948 (985)
..+...++.+++.+.|++..++.+..+++.+ +.+.+. +..++.+.|.++||.+.... ...++.+|++
T Consensus 264 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~---~~i~~~--------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis 332 (351)
T PRK14807 264 RVNYILNERERLIKELSKIPGIKVYPSKTNF---ILVKFK--------DADYVYQGLLERGILVRDFSKVEGLEGALRIT 332 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECcCCccE---EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEE
Confidence 4455566777888888652222222222221 334442 46788999999999874332 1235789999
Q ss_pred ccCCCCHHhhchHHHHHHHHHHH
Q 001990 949 PTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 949 ~t~~~t~eeId~~~~~i~aL~~i 971 (985)
++ +.++.+ +|+++|+++
T Consensus 333 ~~---~~~~~~---~l~~~l~~~ 349 (351)
T PRK14807 333 VS---SCEAND---YLINGLKEL 349 (351)
T ss_pred cC---CHHHHH---HHHHHHHHh
Confidence 84 678889 999999875
No 248
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.69 E-value=4.1e-15 Score=177.91 Aligned_cols=299 Identities=13% Similarity=0.088 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
.+.+.++..|++||.+.+.+.+|++|+|+.++++++. +++|+||+++++|.+....+.+.|++++++++..+
T Consensus 196 ~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n 267 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA--------PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRN 267 (713)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeeEEeccccc
Confidence 4779999999999999998889998988877777653 47899999999999988889999999999986543
Q ss_pred -----CCCCH-----HHHHHHHHhcCCCe---EEEEEEcCCCccccccCHHHHHHHHHHcCCEE-EEEccccccccCCCC
Q 001990 713 -----GNINI-----EELRKAAEANRDNL---STLMVTYPSTHGVYEEGIDEICKIIHDNGGQV-YMDGANMNAQVGLTS 778 (985)
Q Consensus 713 -----g~iDl-----e~L~~~i~~~~~~t---~~Vvi~~pn~~G~i~~di~eI~~la~~~g~ll-iVD~a~~~~~~g~~~ 778 (985)
|.++. +.++++|++++ +. +++++++|++.|++. |+++|.++| |+.+ +||+||. ++..|..
T Consensus 268 ~~Gi~g~I~~~~~~~e~I~~~i~~~p-~~~~p~~vvit~pTYdGi~y-d~~~I~~~~---g~~~ilvDEAhg-ah~~F~p 341 (713)
T PRK15399 268 ALGILGGIPRREFTRDSIEEKVAATT-QAQWPVHAVITNSTYDGLLY-NTDWIKQTL---DVPSIHFDSAWV-PYTHFHP 341 (713)
T ss_pred ccCCcCCCChhhccHHHHHHHHHhCC-CcCCceEEEEECCCCCceee-CHHHHHHHh---CCCEEEEeccch-hhhhcCc
Confidence 45666 99999998763 33 689999999999998 999999998 6766 7999984 2222211
Q ss_pred --C------CcCCCcEE---EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccc
Q 001990 779 --P------GYIGADVC---HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (985)
Q Consensus 779 --~------g~~g~Di~---~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~ 847 (985)
+ +.-++|.+ +.|.||+++.- -..+++-++..+.. .+ +... ...-.+||+ .|
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~al-----TQaS~iHvk~~vd~---~~-~n~a-----~~m~~STSP----sY 403 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAF-----SQASLIHIKGEYDE---ET-FNEA-----FMMHTSTSP----SY 403 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhcccccc-----chheeeeecCCCCH---HH-HHHH-----HHHHcCCCc----HH
Confidence 1 11157877 99999999532 13455555432110 00 0000 000011221 12
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeEc-------------CC---------
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--------YPILFR-------------GV--------- 897 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--------~~i~~~-------------g~--------- 897 (985)
.....+..|.+.|.. ..| ++..+...+.+..+++.|.+. +.+..+ +.
T Consensus 404 ~LmASLD~a~~~m~~--~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~ 480 (713)
T PRK15399 404 PIVASVETAAAMLRG--NPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDAD 480 (713)
T ss_pred HHHHHHHHHHHHHHh--hhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccc
Confidence 122222333333332 233 234456667777777777651 122100 00
Q ss_pred -----CCceeEEEEEEecCcc-----ccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHH
Q 001990 898 -----NGTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQI 967 (985)
Q Consensus 898 -----~~~~~~~~vv~~~~~~-----~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~a 967 (985)
-+|. -+++.++++. ...|+++..+.+.|.++||.+.... ...+.+.++..+|+++++ +++++
T Consensus 481 ~~~~~lDP~--KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---~~~vL~l~s~g~t~~~~~---~L~~a 552 (713)
T PRK15399 481 ADHMFLDPV--KVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---PYNLLFLFSIGIDKTKAM---GLLRG 552 (713)
T ss_pred cccccCCCc--eEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHH---HHHHH
Confidence 0111 1223332110 1247889999999999999975433 367888899999999999 99999
Q ss_pred HHHHHHH
Q 001990 968 LLSLTKF 974 (985)
Q Consensus 968 L~~i~~~ 974 (985)
|.++.+.
T Consensus 553 L~~f~~~ 559 (713)
T PRK15399 553 LTEFKRA 559 (713)
T ss_pred HHHHHHh
Confidence 9987553
No 249
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.69 E-value=8.6e-15 Score=170.19 Aligned_cols=305 Identities=12% Similarity=0.093 Sum_probs=189.5
Q ss_pred hcHHHHHHHHHHHHHHHhCCC---cc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~---~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|.+ .. .+..++|++.. ...+++.+. .+++.|+++.+.+..+...++..|.+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a--l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 153 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA--LAMLPSCFI-----NPGDVTLMTVPGYPVTGTHTKYYGGE 153 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH--HHHHHHHhC-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 576666666666666656654 33 46666666522 222222221 46789999998777777778899999
Q ss_pred EEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cC-C
Q 001990 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG-L 776 (985)
Q Consensus 704 v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g-~ 776 (985)
++.+|.+++ +.+|++++++++. +++++|++++| |++|.+.+ .+++|.++|+++|+++++|+++.... .+ .
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~ 230 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC
Confidence 999999754 5679999999886 68899999999 58999972 37888999999999999999875321 11 0
Q ss_pred CC----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 777 TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 777 ~~----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
.. ....+.++++.|+.|+|+. .|.++|+++++++++..+.... ...+.+.+ ...
T Consensus 231 ~s~~~~~~~~~~~I~i~SfSK~~g~----~GlRiG~ii~~~~l~~~l~~~~--------------~~~~~~~~----~~~ 288 (410)
T PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYNM----TGWRLAFVVGNELIVKAFATVK--------------DNNDSGQF----IAI 288 (410)
T ss_pred cChhcCCCccccEEEEeechhhcCC----chhheEeEEeCHHHHHHHHHHH--------------hccccCCc----HHH
Confidence 01 1112346888888888854 4778999999877665432100 00011110 011
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCcc-c-cCCCCHHHHHHHHHH
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLK-N-TAGIEPEDVAKRLMD 929 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~-~-~~g~~~~~l~~~L~e 929 (985)
..++..++.. .+-+.+..++..++.+++.+.|++ ++.+ ..+.+.++ +.+.++... . ....+..++++.|.+
T Consensus 289 q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~p~g~f~--l~v~lp~~~~~~~~~~~~~~~~~~Ll~ 362 (410)
T PRK06290 289 QKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEVGFKA--EMPGGTFY--LYVKAPKGTKSGIKFENAEEFSQYLIK 362 (410)
T ss_pred HHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCCee--cCCCeeeE--EEEECCCccccCCCCCCHHHHHHHHHH
Confidence 1112222221 122344455567778888898887 3332 22222221 224543100 0 001257789999998
Q ss_pred CCCcc--CCCCCCCCCEEEEeccC-CCCHHhhchHHHHHHHHHHHHHHH
Q 001990 930 YGFHG--PTMSWPVPGTLMIEPTE-SESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 930 ~Gi~~--~~~~~pv~~~lris~t~-~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+|+.+ +...+ .+++||+++. ..++|+.+ +++++|++.+..+
T Consensus 363 ~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~---~~~~~l~~~~~~~ 406 (410)
T PRK06290 363 EKLISTVPWDDA--GHFLRFSVTFEAKDEEEED---RILEEIKRRLSDV 406 (410)
T ss_pred hCCEEEECCccc--cCeEEEEEEcccccccchh---HHHHHHHHHHhhc
Confidence 87654 21112 4689999863 45888899 9999999887653
No 250
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.69 E-value=1.7e-14 Score=162.36 Aligned_cols=275 Identities=20% Similarity=0.169 Sum_probs=190.6
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchh--
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~-- 290 (985)
...+|+.+|+|.|.+. +..|++|.+|+.++++++. ++||+||+++..+..++..+....+++|+++.++|..+
T Consensus 65 ~~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll---~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~ 139 (396)
T COG0626 65 RDALEEALAELEGGED--AFAFSSGMAAISTALLALL---KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDE 139 (396)
T ss_pred HHHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc---CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChH
Confidence 3457789999999877 7789999999998877653 27999999999999999999888888999999998633
Q ss_pred -hhc-cC-CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001990 291 -IDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (985)
Q Consensus 291 -l~~-l~-~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~ 365 (985)
+++ +. ++|++|++..| |++-.+.||++|+++||++|++++| ++.++.+++..|-++||||++.|+ |.+++.-..
T Consensus 140 ~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvV-DNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDv 218 (396)
T COG0626 140 ALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVV-DNTFATPVLQRPLELGADIVVHSATKYLGGHSDV 218 (396)
T ss_pred HHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEE-ECCcccccccChhhcCCCEEEEeccccccCCcce
Confidence 333 44 69999999998 8899999999999999999988888 588999999999999999999998 888642211
Q ss_pred CCCceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHH
Q 001990 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (985)
Q Consensus 366 GGP~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (985)
-+|.+..+. ++.+++ ....++.-|+ +- ++. ..|+..-|.+-|.
T Consensus 219 ---l~G~v~~~~~~~~~~~------------------------~~~~~~~~G~--~l--~p~-----dA~l~lRGlkTL~ 262 (396)
T COG0626 219 ---LGGVVLTPNEELYELL------------------------FFAQRANTGA--VL--SPF-----DAWLLLRGLRTLA 262 (396)
T ss_pred ---eeeEEecChHHHHHHH------------------------HHHHHhhcCC--CC--CHH-----HHHHHHhccchHH
Confidence 124333333 222221 0000111111 00 111 1155666666677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCCHHHHHHHHHHcCce-----e---
Q 001990 445 TIAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----L--- 499 (985)
Q Consensus 445 ~i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~~~~l~~~L~~~Gi~-----~--- 499 (985)
-+.+++.++|..++++|++...++ |+ +. | +..-|+|.+.+.+++.+.+..-.++ +
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgv 342 (396)
T COG0626 263 LRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGV 342 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCc
Confidence 777888899999999999975455 33 21 1 1124677665423333333322231 0
Q ss_pred ------e----------------eecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 500 ------R----------------VVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 500 ------~----------------~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+ -+.++-||+|++.-+.++=|+.|-++|..
T Consensus 343 eSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~ 394 (396)
T COG0626 343 ESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAK 394 (396)
T ss_pred ccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 0 01257799999988877777777777753
No 251
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=4e-15 Score=170.96 Aligned_cols=291 Identities=14% Similarity=0.124 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.+|+.++++...+..++|++.... .+++.+. .+++.|+++++.|..+...+...|.+++.+|.+.+
T Consensus 69 ~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~--~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~- 140 (369)
T PRK08153 69 NHDLRHALAAHHGVAPENIMVGEGIDGLLG--LIVRLYV-----EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD- 140 (369)
T ss_pred cHHHHHHHHHHhCCCHHHEEEcCCHHHHHH--HHHHHhc-----CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC-
Confidence 347889999999988766767667653322 2222221 46789999988666666567788999999998655
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEccccccc-cC-CCCCCcCCCc-EE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ-VG-LTSPGYIGAD-VC 787 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~-~g-~~~~g~~g~D-i~ 787 (985)
.+|++++.+.+. .+++++|++++| |++|.+. +.+++.++++. +|+++++|+++..-. .+ .........+ ++
T Consensus 141 ~~~~~~l~~~~~--~~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~ 217 (369)
T PRK08153 141 REDLDALLDAAR--RENAPLVYLANPDNPMGSWH-PAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIR 217 (369)
T ss_pred CCCHHHHHHHhc--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEE
Confidence 479999887764 257888999999 5799997 66666666654 389999999874211 11 0000111122 55
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+.|+.|+|++ .|.++|++++++++++.+.... .+.+++ .....++.+++. ..+-
T Consensus 218 ~~SfSK~~g~----~GlRiG~~v~~~~~~~~l~~~~--------------~~~~~s------~~~q~~~~~~l~--~~~~ 271 (369)
T PRK08153 218 MRTFSKAYGL----AGARVGYAIGAPGTIKAFDKVR--------------NHFGMN------RIAQAAALAALK--DQAY 271 (369)
T ss_pred EecchHhccC----cchheeeeecCHHHHHHHHHhh--------------cCCCCC------HHHHHHHHHHhc--CHHH
Confidence 6677777743 4788999999877665432100 001111 111222233332 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CCCCCEE
Q 001990 868 LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTL 945 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~pv~~~l 945 (985)
+.+..+...++.+++.+.|++ ++.+. + . +.. .+.+++.. .+....++.+.|.++||.+.... .+.++.+
T Consensus 272 ~~~~~~~~~~~r~~~~~~L~~~g~~~~-p-~-~~~--f~~~~~~~----~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~i 342 (369)
T PRK08153 272 LAEVVGKIAAARDRIAAIARANGLTPL-P-S-ATN--FVAIDCGR----DGAFARAVLDGLIARDIFVRMPGVAPLDRCI 342 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccC-C-C-cCc--EEEEECCC----CcccHHHHHHHHHHCCeEEeeCCCCCCCCeE
Confidence 444455556677778888876 44321 1 1 122 23344421 12457789999999999873211 1224789
Q ss_pred EEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 946 MIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 946 ris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
|+++. +++|++ +|+++|++++..++
T Consensus 343 Ris~~---~~~~~~---~~~~al~~~~~~~~ 367 (369)
T PRK08153 343 RVSCG---PDEELD---LFAEALPEALEAAR 367 (369)
T ss_pred EEecC---CHHHHH---HHHHHHHHHHHHhh
Confidence 99985 799999 99999999887554
No 252
>PRK06541 hypothetical protein; Provisional
Probab=99.69 E-value=9.1e-15 Score=171.65 Aligned_cols=306 Identities=16% Similarity=0.166 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|++++..+. ..++.+||+++++++++.+|.|....|..++.+||. ...+||.........|.
T Consensus 97 ~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 176 (460)
T PRK06541 97 AIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEP 176 (460)
T ss_pred HHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCC
Confidence 4567888888875322 347789999999999999998764444333566765 66899987655432221
Q ss_pred ---EEEEEeCCCCC-----CCC--------HHHHHHHHHhc-CCCeEEEEEEcC-CCccccccC----HHHHHHHHHHcC
Q 001990 703 ---KIVSVGTDAKG-----NIN--------IEELRKAAEAN-RDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNG 760 (985)
Q Consensus 703 ---~v~~v~~~~~g-----~iD--------le~L~~~i~~~-~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~g 760 (985)
.+..+|..... ..| ++.+++.+++. .+++++|+++-. +..|.+. + +++|.++|+++|
T Consensus 177 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~-~~~~yl~~l~~lc~~~g 255 (460)
T PRK06541 177 LVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFP-PPPGYFERVREICDRYD 255 (460)
T ss_pred CCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCcc-CCHHHHHHHHHHHHHcC
Confidence 12334332111 112 36788888643 245666666432 5678776 5 999999999999
Q ss_pred CEEEEEccccccccCCCCCCc------C--CCcEEEeCCcccccccCCCCCC-cceeeeecccccCcCCCCccccCCCCC
Q 001990 761 GQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (985)
Q Consensus 761 ~lliVD~a~~~~~~g~~~~g~------~--g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~~lpg~~~g~~~~~~ 831 (985)
+++|+|++|. ++.+.|. + .+|++++ .|.++ ||. .+|.+++++++.+.+.... .
T Consensus 256 ~llI~DEV~t----GfGR~G~~~a~~~~gv~PDivt~--gK~l~-----~G~~pigav~~~~~i~~~~~~~~-~------ 317 (460)
T PRK06541 256 VLLVSDEVIC----AFGRLGEMFGCERFGYVPDIITC--AKGIT-----SGYSPLGAMIASDRLFEPFLDGP-T------ 317 (460)
T ss_pred CEEEEechhh----CCCcCchhhhhhhcCCCCCEEEe--ccccc-----CCccceeEEEEcHHHHHHhhcCC-C------
Confidence 9999999872 2222222 2 3688864 47763 343 4677777877655432100 0
Q ss_pred CCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEE
Q 001990 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIV 907 (985)
Q Consensus 832 ~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv 907 (985)
.... .+++.|++..++++.+.+..+..+++. ++..++.++|.++|++. ..++ ..|. +.. +.+
T Consensus 318 ------~~~~-~~T~~gnp~~~aaala~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~---~~i 383 (460)
T PRK06541 318 ------MFLH-GYTFGGHPVSAAVALANLDIFEREGLL---DHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYF---YGI 383 (460)
T ss_pred ------cccc-CCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceE---EEE
Confidence 0000 012334566677777888887666543 56677888999988763 2221 2221 221 222
Q ss_pred EecCccc-cCCC---C----H-HHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 908 DLRGLKN-TAGI---E----P-EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 908 ~~~~~~~-~~g~---~----~-~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.+..-.. .... . . ..+.+.|.++|+++.... .-.+.||++|...+|++||| +++++|.+++.++.
T Consensus 384 e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~g~~~lrl~Ppl~~t~~~id---~~~~~l~~~l~~~~ 457 (460)
T PRK06541 384 ELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-RGDPVVQLAPPLISGQEEFD---EIEQILRSVLTEAW 457 (460)
T ss_pred EEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-CCCCEEEEECCCCCCHHHHH---HHHHHHHHHHHHHH
Confidence 2210000 0000 0 1 256788899999975321 11368999999999999999 99999999987654
No 253
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.68 E-value=8.8e-15 Score=170.72 Aligned_cols=376 Identities=14% Similarity=0.111 Sum_probs=220.3
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccc----cCCCCcchhhhcHHHHHHHHHHHHHH
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN----IHPFAPADQAQGYQEMFNNLGEWLCT 643 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~----~~p~~p~e~~~G~~~~~~el~~~la~ 643 (985)
+.|.++.+.+..+.+....+++++.+|+.|.++++......+. .++.. ...+ ....| ....++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~--~~~~a~~~~~~~~---~~~~G--~~~~~fe~~lA~ 74 (438)
T PRK15407 2 MTEEELRQQILELVREYAELAHAPKPFVPGKSPIPPSGKVIDA--KELQNLVDASLDF---WLTTG--RFNDAFEKKLAE 74 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCCH--HHHHHHHHHHHhC---cccCC--hhHHHHHHHHHH
Confidence 5788999999888888777777777787676655543322221 00100 0000 00112 236689999999
Q ss_pred HhCCCccceecChHHHHHHHHHHHHHHH-HHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-CCCCCHHHHH
Q 001990 644 ITGFDSFSLQPNAGAAGEYAGLMVIRAY-HKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELR 721 (985)
Q Consensus 644 l~G~~~~~~~~~sGa~g~~a~l~air~~-~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-~g~iDle~L~ 721 (985)
++|.+.+ +.++||+.+...++.++... ....+..++++||++...|..+...+...|++++.++++. ++.+|+++++
T Consensus 75 ~~g~~~~-v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le 153 (438)
T PRK15407 75 FLGVRYA-LLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLE 153 (438)
T ss_pred HhCCCeE-EEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHH
Confidence 9998764 66778887775555543210 0011234689999999877766666778999999999874 5789999999
Q ss_pred HHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC-CCCcCCCcEEEeCCcccccccCC
Q 001990 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGADVCHLNLHKTFCIPHG 800 (985)
Q Consensus 722 ~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-~~g~~g~Di~~~s~hKtl~~p~g 800 (985)
++++ ++|++|+++++ .|... |+++|.++|+++|+++++|++|+.+...-. ..|.+| |+.++|+|..-.. .
T Consensus 154 ~~i~---~~tkaVi~~~~--~G~p~-dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~--~ 224 (438)
T PRK15407 154 AAVS---PKTKAIMIAHT--LGNPF-DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHI--T 224 (438)
T ss_pred HHcC---cCCeEEEEeCC--CCChh-hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCc--c
Confidence 9997 78999999864 56666 899999999999999999999975542211 245565 9999998764322 2
Q ss_pred CCCCcceeeeeccc-ccCcCCC-CccccCC------CC------------CCCCCC--CCCCCcccccchhhhHHHHHHH
Q 001990 801 GGGPGMGPIGVKKH-LAPFLPS-HPVVSTG------GI------------PAPEKS--QPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 801 ~GGPg~G~l~~~~~-l~~~lpg-~~~g~~~------~~------------~~~~~~--~~t~~i~s~~~g~~~~~~~A~a 858 (985)
.|.| |+++++++ +.+.+.. +..|... +. ..++.. .....+..+.--+-..++.+..
T Consensus 225 -~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~ 302 (438)
T PRK15407 225 -MGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLA 302 (438)
T ss_pred -ccCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHH
Confidence 2444 78888753 3322110 0011000 00 000000 0000000000001111222222
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhccCC-eeEcC-C-C-CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRG-V-N-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 859 ~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~-i~~~g-~-~-~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
-| +.+.+..++-.++++++.+.|.+... +..+. + + .+..+.+.+.++. ..+.+..++.+.|.++||.+
T Consensus 303 qL-----~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~Rd~l~~~L~~~GI~~ 374 (438)
T PRK15407 303 QL-----EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE---DAGFTRVELVKYLEENKIGT 374 (438)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC---cCCCCHHHHHHHHHHCCCCc
Confidence 22 23445555666777888888875221 21211 1 1 1223344454431 11356789999999999965
Q ss_pred CCCC--------------------CCC-----CCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 935 PTMS--------------------WPV-----PGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 935 ~~~~--------------------~pv-----~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.... +|. ...|.+-+...-|++|++ +.+++|+++++
T Consensus 375 ~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~---~i~~~i~~~~~ 435 (438)
T PRK15407 375 RLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLD---YVIEKIEEFFG 435 (438)
T ss_pred cccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHH---HHHHHHHHHHh
Confidence 3111 010 123444445556899999 99999998764
No 254
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.68 E-value=3.2e-15 Score=171.62 Aligned_cols=210 Identities=20% Similarity=0.172 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~ 708 (985)
...++++.+++++|.+.+ +.+++|+.++..++.++. .++++||++...|+..... +...|++++.++
T Consensus 41 ~~~~le~~la~l~g~~~a-~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 111 (369)
T cd00614 41 TVDALEKKLAALEGGEAA-LAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD 111 (369)
T ss_pred hHHHHHHHHHHHHCCCCE-EEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeC
Confidence 466899999999998765 556778776655554432 3678899988777655432 346799999988
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
.+ |+++++++++ +++++|++++| |++|.+. |+++|+++||++|++++||+++..+. +..+..+|+|++
T Consensus 112 ~~-----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g~~livD~t~~~~~--~~~~~~~g~Div 180 (369)
T cd00614 112 PD-----DPEALEAAIK---PETKLVYVESPTNPTLKVV-DIEAIAELAHEHGALLVVDNTFATPY--LQRPLELGADIV 180 (369)
T ss_pred CC-----CHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcchh--cCChhhhCCcEE
Confidence 74 6999999997 68999999998 5789998 89999999999999999999985432 235557799999
Q ss_pred EeCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+.|++|+++.+ |...+|++++++ ++.+.+.... ...+... ++ ..+|..+..+ +
T Consensus 181 v~S~tK~l~g~---~~~~gG~v~~~~~~l~~~l~~~~-------------~~~g~~~-----~p---~~a~~~l~~l--~ 234 (369)
T cd00614 181 VHSATKYIGGH---SDVIAGVVVGSGEALIQRLRFLR-------------LALGTIL-----SP---FDAWLLLRGL--K 234 (369)
T ss_pred EeccceeccCC---CCceEEEEEeCcHHHHHHHHHHH-------------HhhCCCC-----CH---HHHHHHHcCC--C
Confidence 99999998421 223478898876 6554432100 0001111 11 1233333333 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001990 867 GLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.+....++..+++.++.+.|++
T Consensus 235 tl~~r~~~~~~na~~la~~L~~ 256 (369)
T cd00614 235 TLPLRMERHSENALKVAEFLEK 256 (369)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc
Confidence 5566677888999999999987
No 255
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=5.3e-15 Score=169.38 Aligned_cols=282 Identities=14% Similarity=0.109 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.++++++.+...+.+++|++. +...+++.+. .++++|+++++.++.+...+...|.+++.+|.+ ++
T Consensus 66 ~~~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~ 137 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQLLFGAGLDE--VIQMISRALL-----NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DG 137 (359)
T ss_pred HHHHHHHHHHHhCCCHHHEEECCCHHH--HHHHHHHHHh-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CC
Confidence 446788899999987766655555542 2223333332 367889998876655555567889999999987 67
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEcccccccc-CC-CCC----CcCCC
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQV-GL-TSP----GYIGA 784 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~~-g~-~~~----g~~g~ 784 (985)
.+|+++++++++ +++++|++++| |++|.+. +.++|.++++. +|+++++|+++..... +. ..+ ...+-
T Consensus 138 ~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 213 (359)
T PRK03158 138 GHDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN 213 (359)
T ss_pred CcCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCC
Confidence 899999999886 68889999999 5799998 78898888877 5999999999743211 10 000 11233
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
.+++.|+.|+|+. .|.++|++++++++.+.+... ..+.+++ .....++..++. .
T Consensus 214 vi~~~S~SK~~g~----~GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~------~~~q~~~~~~l~--~ 267 (359)
T PRK03158 214 LIVLRTFSKAYGL----AALRVGYGIASEELIEKLNIA--------------RPPFNTT------RIAQYAAIAALE--D 267 (359)
T ss_pred EEEEEechHhhcC----cchhhehhcCCHHHHHHHHHh--------------cCCCCCC------HHHHHHHHHHhc--C
Confidence 5677788888753 367889999987766544210 0001111 111122233332 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CCCCC
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVP 942 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~pv~ 942 (985)
.+-+++..+...++.+++.+.|++ ++.+ ..+++. + +.+++. .+..++.+.|.++||.+... .+..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~g~-~--i~~~~~-------~~~~~~~~~l~~~gv~v~~g~~f~~~ 335 (359)
T PRK03158 268 QAFLKECVEKNAEGLEQYYAFCKEYGLFY--YPSQTN-F--IFVDTG-------RDANELFEALLKKGYIVRSGAALGFP 335 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCee--CCCcCc-E--EEEECC-------CCHHHHHHHHHHCCeEEeeCCCCCCC
Confidence 122333444455666777777776 3332 222222 1 234432 35788999999999987542 23235
Q ss_pred CEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 943 GTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 943 ~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
+++||++ .+.+|++ +|+++|+++
T Consensus 336 ~~iRi~~---~~~~~~~---~l~~al~~~ 358 (359)
T PRK03158 336 TGVRITI---GLKEQND---KIIELLKEL 358 (359)
T ss_pred CeEEEec---CCHHHHH---HHHHHHHHh
Confidence 8899997 4899999 999999875
No 256
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.68 E-value=3.7e-15 Score=168.28 Aligned_cols=357 Identities=13% Similarity=0.120 Sum_probs=223.7
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhC-
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG- 646 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G- 646 (985)
+.+.+-.|+|+-+++-. ....|++...++.+...|...- .| ++++.- .+ +-..++.++|+++..
T Consensus 38 l~d~~G~r~lDg~sg~W------~~~~Gh~~~~i~~Ai~~Q~~~l-~~--~~~~~~----t~--~Pa~~LA~~L~~~aP~ 102 (449)
T COG0161 38 LTDIDGRRYLDGMSGLW------CVNHGHGRPEIAEAIKKQLDKL-PH--VMFGGF----TH--EPAIELAEKLAELAPE 102 (449)
T ss_pred EEeCCCCEEEecccHHH------HhhcCcCCHHHHHHHHHHHHhC-Cc--hhhccc----CC--chHHHHHHHHHHhCCC
Confidence 34445556666555432 1346888887777666654222 11 122211 11 114478899999987
Q ss_pred --CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC-------------cEEEEEeCC
Q 001990 647 --FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG-------------MKIVSVGTD 710 (985)
Q Consensus 647 --~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G-------------~~v~~v~~~ 710 (985)
++. .|+.+|||++++.+++.++.|++.+|..+|.++|. ...+||..-..+...| ..+..+|..
T Consensus 103 ~~l~~-vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P 181 (449)
T COG0161 103 GGLDH-VFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAP 181 (449)
T ss_pred CCccE-EEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCC
Confidence 333 47889999999999999999999999755666775 6678987654432222 123334332
Q ss_pred C------CCC------CCHHHHHHHHHhcC-CCeEEEEEEcC-C-CccccccC---HHHHHHHHHHcCCEEEEEcccccc
Q 001990 711 A------KGN------INIEELRKAAEANR-DNLSTLMVTYP-S-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNA 772 (985)
Q Consensus 711 ~------~g~------iDle~L~~~i~~~~-~~t~~Vvi~~p-n-~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~ 772 (985)
. ++. -+.++|+++|.+++ +++++++++-. . ..|++.+| ++++.++|++||++||+|++
T Consensus 182 ~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV---- 257 (449)
T COG0161 182 YAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV---- 257 (449)
T ss_pred cccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc----
Confidence 1 111 23678899998887 56666666432 2 36777633 89999999999999999975
Q ss_pred ccCCCCCCcCC--------CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCccc
Q 001990 773 QVGLTSPGYIG--------ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (985)
Q Consensus 773 ~~g~~~~g~~g--------~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s 844 (985)
..||.+.|++. +|+++.+ |.+.. |---+|.+.+++++.+.+.....+. ..|+ .
T Consensus 258 ~tGFGRTG~~FA~e~~gi~PDi~~~a--KGLT~----GY~Pl~a~l~~~~I~~~~~~~~~~~----f~HG------~--- 318 (449)
T COG0161 258 ATGFGRTGKMFACEHAGIVPDILCLA--KGLTG----GYLPLSAVLTSDRIYEAFSDGDAGA----FMHG------H--- 318 (449)
T ss_pred eeCCCcCchhhhhhhcCCCCCeeeec--ccccc----cchhhHhHhhhHHHHHHHhcccCCe----eccC------C---
Confidence 46777776542 6998874 87742 2224555666666554332110110 0111 1
Q ss_pred ccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cC--CeeEcCCCCceeEEEEEEecCccccCCCC--
Q 001990 845 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HY--PILFRGVNGTVAHEFIVDLRGLKNTAGIE-- 919 (985)
Q Consensus 845 ~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~--~i~~~g~~~~~~~~~vv~~~~~~~~~g~~-- 919 (985)
++.|+++.+++|.+.|..+.++++.+ +..+...+|.++|++ .. ..+-.-.+ ..-...+.+.. ......
T Consensus 319 TYsghPlacAaAla~L~i~e~e~l~~---~~~~~~~~l~~~L~~~l~~~p~VgdVR~--~Gli~~iElv~--d~~t~~~f 391 (449)
T COG0161 319 TYSGNPLACAAALANLDILEEEDLLE---RVAEIGAYLQAGLQAALADHPLVGDVRG--LGLIGAIELVA--DKATKTPF 391 (449)
T ss_pred ccccCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHhcccCCcEEEeec--cceEEEEEEec--ccccccch
Confidence 23357888888999999998887654 555778889988886 22 12111010 01112223221 001111
Q ss_pred ----HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 920 ----PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 920 ----~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
...+.+.+.++|+.+.++ .+.+-++|....|++||| ++++++++.+++...
T Consensus 392 ~~~~~~~~~~~~~e~Gl~iRp~----g~~i~~~PPliit~~eid---~l~~~l~~al~~~~~ 446 (449)
T COG0161 392 EARVGARVRAAALERGLLIRPL----GDVIYLMPPLIITREEID---ELVDALREALDETLA 446 (449)
T ss_pred hhhHHHHHHHHHHHCCeEEeec----CCEEEEcCCccCCHHHHH---HHHHHHHHHHHHHHh
Confidence 567888888999998643 478999999999999999 999999999887653
No 257
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.68 E-value=1.1e-14 Score=166.60 Aligned_cols=273 Identities=16% Similarity=0.092 Sum_probs=187.1
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
..+++.++.|.|.+. +.++.+|++++.++++++ +. +||+||+++..|+.+...++..++.+|+++++++. ++
T Consensus 67 ~~Le~~la~le~~~~--~v~~sSG~aAi~~~l~al-l~--~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~ 141 (395)
T PRK05967 67 DALCKAIDALEGSAG--TILVPSGLAAVTVPFLGF-LS--PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG 141 (395)
T ss_pred HHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHh-cC--CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence 346689999998665 567888999988887775 33 89999999999999988776667789999999986 34
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |+++.+.|+++|+++||++|++++|| +.++.++...|.++||||++.|. |.+++ -|.
T Consensus 142 l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD-~t~a~p~~~~pl~~GaDivv~S~tKy~~G---h~d 217 (395)
T PRK05967 142 IAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD-NTWATPLYFRPLDFGVDISIHAATKYPSG---HSD 217 (395)
T ss_pred HHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE-CCccCceecChhHcCCCEEEEecccccCC---CCC
Confidence 666 8889999999997 78999999999999999999999995 45666677789999999999999 66542 122
Q ss_pred CceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHH
Q 001990 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (985)
Q Consensus 368 P~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 447 (985)
=-+|.+..++++.+++- ..++..|.. + ++. ..|+...|.+-|.-+.
T Consensus 218 ~~~G~v~~~~~~~~~l~-------------------------~~~~~~G~~-~---~p~-----da~l~~rgl~Tl~lR~ 263 (395)
T PRK05967 218 ILLGTVSANEKCWPQLL-------------------------EAHGTLGLC-A---GPD-----DTYQILRGLRTMGIRL 263 (395)
T ss_pred eeEEEEEcCHHHHHHHH-------------------------HHHHHcCCC-C---CHH-----HHHHHHcCcccHHHHH
Confidence 22466655554433320 001111110 0 121 2345677777777788
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecC-----C---HHHHHHHHHH--cCceee
Q 001990 448 QRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCA-----D---AHAIASAAYK--IEMNLR 500 (985)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~-----~---~~~l~~~L~~--~Gi~~~ 500 (985)
+++.++|..+++.|++...++ |. +. | +..-|+|..+ + +.++.++|.= .+..+.
T Consensus 264 ~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG 343 (395)
T PRK05967 264 EHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWG 343 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCC
Confidence 888999999999999875453 32 11 1 1124666654 2 3334444331 111110
Q ss_pred ---e----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 ---V----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 ---~----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. ..++.+|+|++.-+.++-++.|.++|..
T Consensus 344 ~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~ 391 (395)
T PRK05967 344 GYESLALHVKLGDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAA 391 (395)
T ss_pred CcceeeeeCCCChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0 1135789999988777777777777763
No 258
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=3.2e-15 Score=173.87 Aligned_cols=298 Identities=16% Similarity=0.075 Sum_probs=189.1
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch---
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~--- 289 (985)
..++++.+|++.|.+. +.++.+||+++.+++.++ +. +||+||++..+|+++...+...++.+|++++++|++
T Consensus 66 ~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~l-l~--~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~ 140 (433)
T PRK08134 66 VAVLEERVAALEGGVG--AIATASGQAALHLAIATL-MG--AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDID 140 (433)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHH
Confidence 5668899999999876 678999999988877665 33 889999999999998887766556789999999764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| ..++.+.+..|.++|||+++.|+ |++++| +-
T Consensus 141 ~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD-~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~-g~- 217 (433)
T PRK08134 141 GWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVD-STFTTPYLLRPFEHGADLVYHSATKFLGGH-GT- 217 (433)
T ss_pred HHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEeccccccCCC-CC-
Confidence 5566 8899999999987 78999999999999999999999995 34566666677899999999999 665432 21
Q ss_pred CCceEEEEE-c-------hhhHhcCCCceeeee-ecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001990 367 GPHAAFLAT-S-------QEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (985)
Q Consensus 367 GP~~G~l~~-~-------~~~~~~lp~~~vG~s-~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~ 437 (985)
..|.+++ + .+....+.+.+.|+. .... +. +... ...... |..++.+.+.. +...-| |+..
T Consensus 218 --~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~-~~~~--~~~~~~-~~~~~~~~G~~--ls~~~A--~l~~ 286 (433)
T PRK08134 218 --AIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFA-EE-STVA--AFLLRA-RREGLRDFGAC--LSPMNA--WQLL 286 (433)
T ss_pred --ceEEEEEecCccccccccccccccCCcccccccchh-hc-cchh--HHHHHH-HHHHHHhcCCC--CCHHHH--HHHh
Confidence 0222322 2 122223333333321 0000 00 0000 000001 11122222110 111111 2355
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc--CC----C------------CcceEEEecCC----HHHHHHHHHHc
Q 001990 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--GL----P------------FFDTVKVKCAD----AHAIASAAYKI 495 (985)
Q Consensus 438 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~--~~----~------------~~~~~~i~~~~----~~~l~~~L~~~ 495 (985)
.|-+-+..+.++..++|..+++.|++++.++-+ +. + +..-|+|.+++ +.++.+.|.=.
T Consensus 287 ~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~ 366 (433)
T PRK08134 287 QGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLF 366 (433)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcc
Confidence 666677888888899999999999987545322 11 1 11236777653 33444444311
Q ss_pred --Ccee---------e------e----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 496 --EMNL---------R------V----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 496 --Gi~~---------~------~----------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+..+ + . +.++.||+|++.-+.++=|+.|.++|..
T Consensus 367 ~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGlE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 367 SHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGLEDADDLIDDLKRALKA 427 (433)
T ss_pred eeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 1111 0 0 1246799999988766667777777764
No 259
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.68 E-value=8e-15 Score=171.12 Aligned_cols=298 Identities=17% Similarity=0.179 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCcHHHHHhcC-------
Q 001990 631 QEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCG------- 701 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~-~~Hg~~~~~~~~~G------- 701 (985)
.+...++++.+++++|.+. ..++++||++++++++.+++.+ .++++|++.+ .+|+.....+...+
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 151 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGG 151 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCcccccc
Confidence 3567789999999998433 3467789999888777777654 3466777654 68887766554332
Q ss_pred -----cEEEEEeCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC----HHHHHHHHHHcCCEEEE
Q 001990 702 -----MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYM 765 (985)
Q Consensus 702 -----~~v~~v~~~~~------g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~g~lliV 765 (985)
.+++.+|.+.. ...|+++|+++++++++++++|+++.. +.+|.+. + +++|.++|+++|+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~-~~~~~l~~l~~l~~~~~~~li~ 230 (413)
T cd00610 152 FGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIV-PPPGYLKALRELCRKHGILLIA 230 (413)
T ss_pred CCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCcc-CCHHHHHHHHHHHHHcCCEEEE
Confidence 24666776532 334899999999854346666666543 3568765 4 99999999999999999
Q ss_pred EccccccccCCCCC---C--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCC
Q 001990 766 DGANMNAQVGLTSP---G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (985)
Q Consensus 766 D~a~~~~~~g~~~~---g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~ 840 (985)
|+++. +++..... . ...+|++++ .|+|+ +|.++|++++++++++.+...... . ..
T Consensus 231 Dev~~-g~g~~g~~~~~~~~~~~~d~~t~--sK~l~-----~g~~~g~~~~~~~~~~~~~~~~~~-----------~-~~ 290 (413)
T cd00610 231 DEVQT-GFGRTGKMFAFEHFGVEPDIVTL--GKGLG-----GGLPLGAVLGREEIMDAFPAGPGL-----------H-GG 290 (413)
T ss_pred ecccc-CCCcCcchhhHhhcCCCCCeEEE--ccccc-----CccccEEEEEcHHHHHhhccCCCC-----------C-CC
Confidence 99984 22111100 1 123577655 48884 245688888888777664110000 0 01
Q ss_pred CcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeEcCC-CCceeEEEEEEecCccc--
Q 001990 841 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGV-NGTVAHEFIVDLRGLKN-- 914 (985)
Q Consensus 841 ~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~~~g~-~~~~~~~~vv~~~~~~~-- 914 (985)
..+ +++..++++.+.++.+..+. ..++...+.++++++|++. ..+..... .+. .+.+.+..-..
T Consensus 291 t~~----~~~~~~~a~~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~ 360 (413)
T cd00610 291 TFG----GNPLACAAALAVLEVLEEEG---LLENAAELGEYLRERLRELAEKHPLVGDVRGRGL---MIGIELVKDRATK 360 (413)
T ss_pred CCC----cCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCce---EEEEEEecCCCcC
Confidence 111 12333445556666665433 3456677788888888762 12221111 122 22333321000
Q ss_pred -cCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 915 -TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 915 -~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
........+.+.|.++||.+.... ++.+|++++..+|++||+ +++++|+++
T Consensus 361 ~~~~~~~~~~~~~l~~~gv~v~~~~---~~~lR~~~~~~~t~~~i~---~~~~~l~~~ 412 (413)
T cd00610 361 PPDKELAAKIIKAALERGLLLRPSG---GNVIRLLPPLIITEEEID---EGLDALDEA 412 (413)
T ss_pred CcchHHHHHHHHHHHHCCeEEeecC---CCEEEEECCCcCCHHHHH---HHHHHHHHh
Confidence 000245678999999999975432 478999999999999999 999998765
No 260
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.68 E-value=1.5e-14 Score=169.19 Aligned_cols=308 Identities=14% Similarity=0.136 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC----------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG---------- 701 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G---------- 701 (985)
..++.++|++++... ...++.+||+++++++++.+|.|...+|...+.+||. ...+||....+....|
T Consensus 94 ~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~ 173 (445)
T PRK09221 94 AFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGG 173 (445)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCC
Confidence 446888888887432 2346789999999999999998865444333556764 6688987654432211
Q ss_pred --cEEEEEeCCC---C---CC-------CCHHHHHHHHHhcC-CCeEEEEEEcC-CCccccccC----HHHHHHHHHHcC
Q 001990 702 --MKIVSVGTDA---K---GN-------INIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNG 760 (985)
Q Consensus 702 --~~v~~v~~~~---~---g~-------iDle~L~~~i~~~~-~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~g 760 (985)
..+..+|... . +. ..++++++.+++++ +++++|+++.. +..|++. + +++|.++|+++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~-~~~~yl~~l~~lc~~~g 252 (445)
T PRK09221 174 LLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLV-PPKGYLQRLREICDKHG 252 (445)
T ss_pred CCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCccc-CCHHHHHHHHHHHHHcC
Confidence 1123343321 0 00 12467888887553 67888888753 4578876 5 999999999999
Q ss_pred CEEEEEccccccccCCCCCCc------C--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCC
Q 001990 761 GQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (985)
Q Consensus 761 ~lliVD~a~~~~~~g~~~~g~------~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~ 832 (985)
+++|+|++|. + +.+.|. + .+|++++ .|.++ +|...+|.+++++++.+.+...... .
T Consensus 253 ~llI~DEV~t-G---~GRtG~~~~~~~~gv~PDi~~~--gK~l~----gG~~Pi~av~~~~~i~~~~~~~~~~-~----- 316 (445)
T PRK09221 253 ILLIFDEVIT-G---FGRLGAAFAAERFGVTPDIITF--AKGLT----NGAIPMGAVIASDEIYDAFMQGPEY-A----- 316 (445)
T ss_pred CEEEEeehhh-C---CCcCchhhHHHhcCCCCCEEEe--ccccc----cCcccceeeEEcHHHHHhhccCccc-c-----
Confidence 9999999873 2 333322 2 2588765 37663 3423356677787766544211000 0
Q ss_pred CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEec
Q 001990 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLR 910 (985)
Q Consensus 833 ~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~ 910 (985)
..... .+++.|+++.++++.+.|..+..+++ .++..++.++|++.|++. +..+..-.....+ ..+.+.
T Consensus 317 --~~~~~---~~T~~~~pl~~aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~--~~v~~~ 386 (445)
T PRK09221 317 --IEFFH---GYTYSAHPVACAAGLATLDIYREEDL---FERAAELAPYFEDAVHSLKGLPHVIDIRNIGLV--AGIELA 386 (445)
T ss_pred --ccccc---ccCCCcCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHhhccCCCEEEEecCceE--EEEEEe
Confidence 00000 11233466667777788888766654 456777888999888762 2211110000111 122221
Q ss_pred CccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 911 GLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 911 ~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
............+.+.|.++|+.+... .+.||++|+..+|++||| +++++|++++.++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~Gv~~~~~----~~~lr~~Ppl~~t~~eid---~~~~~l~~~l~~~ 444 (445)
T PRK09221 387 PRPGAPGARGYEAFMKCFEKGLLVRYT----GDTIALSPPLIIEKAQID---ELVDALGDALRAV 444 (445)
T ss_pred cccccccchHHHHHHHHHHCCeEEeec----CCEEEEECCccCCHHHHH---HHHHHHHHHHHhh
Confidence 100001122457889999999997532 368999999999999999 9999999988653
No 261
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.68 E-value=6.9e-15 Score=154.84 Aligned_cols=309 Identities=17% Similarity=0.126 Sum_probs=196.7
Q ss_pred cHHHHHHHHHHHHHHHhCCCccceecChHHHHH-HHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH-----HHhcCc
Q 001990 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGE-YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGM 702 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~-~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~-----~~~~G~ 702 (985)
.+.++-+.+-.+++-+.|.....+....++..+ +..|.+. +. ..++++||+++...+....+ +.+.|+
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aa--lr----~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~ 146 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAA--LR----PQEGRRVIVSEGDNFPTDLYIAEGLADLLGI 146 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHH--hc----cCCCceEEeecCCCCCcchhhhcchhhhhcc
Confidence 344455567789999999877544333333334 2222222 11 13456788877532221222 223332
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCc
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~-~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~ 781 (985)
. .+-.+.+++++++++++ ++++.|++++.|+ +|... |+.+|..++|++|+++..|=||+.+.... ....
T Consensus 147 ~-----~~~~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~-dm~aiT~~AH~~galv~wDLAHsaGavp~-~Lh~ 216 (407)
T COG3844 147 G-----YDLEGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLL-DMRAITALAHQHGALVGWDLAHSAGAVPV-DLHA 216 (407)
T ss_pred c-----ccceeeeChHHHHHhhc---cceEEEEecccccccccee-eHHHHHHHHHhcCceEEeehhcccCCcce-eecc
Confidence 2 23346678899999998 9999999999985 89998 99999999999999999999998666543 3467
Q ss_pred CCCcEEEeCCcccccccCCCCCC-cceeeeecccccC-cCCCCccccCCCCCCCC----CCC---CCCCcccccchhhhH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAP-FLPSHPVVSTGGIPAPE----KSQ---PLGTIAAAPWGSALI 852 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~-~lpg~~~g~~~~~~~~~----~~~---~t~~i~s~~~g~~~~ 852 (985)
+|+|+.+++.||.|+ ||| +.+++++.++..+ ..| ..-||.+..-++. +.. .....|+++ ....
T Consensus 217 ~gaDfaigcsyKYLN-----gGPGapa~l~v~~~h~e~~~~-~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~--~V~s 288 (407)
T COG3844 217 AGADFAIGCSYKYLN-----GGPGAPAGLFVAPRHRERSWP-PLSGWWGHARPFAMEEVYAPGPGARRFLCGTQ--PVLS 288 (407)
T ss_pred cCCCeeeeeeceecc-----CCCCCceeEEecccccccccc-ccccccCCCCcchhhhccCcCccccceeeCCc--chhh
Confidence 899999999999995 678 4677888765443 333 2334432110000 000 011122221 1111
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCeeEcCCC--CceeEEEEEEecCccccCCCCHHHHHHHH
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPILFRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~~~g~~--~~~~~~~vv~~~~~~~~~g~~~~~l~~~L 927 (985)
+++--..|....+-++.+..++...+++|+.+.++. .+.+....|. ......+.+.. -..+.+.+.|
T Consensus 289 ~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h--------p~~~~V~qaL 360 (407)
T COG3844 289 LAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH--------PHGYQVMQAL 360 (407)
T ss_pred hHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEec--------CcHHHHHHHH
Confidence 122224466666777888889999999999998875 2232222221 11112233333 2578999999
Q ss_pred HHCCCccCCCCCCCCCEEEEeccC-CCCHHhhchHHHHHHHHHHHHHHH
Q 001990 928 MDYGFHGPTMSWPVPGTLMIEPTE-SESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 928 ~e~Gi~~~~~~~pv~~~lris~t~-~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.++|+..-. . -|+.||+.+++ +++-+|+- ..+++|.+++++.
T Consensus 361 i~rGVigD~-R--~P~vlRfgftPlY~~~~DVw---~AV~~L~evL~t~ 403 (407)
T COG3844 361 IDRGVIGDF-R--EPDVLRFGFTPLYVSFVDVW---DAVDALEEVLDTL 403 (407)
T ss_pred HHcCccccc-c--CCCeeeecCccceechhHHH---HHHHHHHHHHHhh
Confidence 999998642 2 25899999986 68999999 9999999998764
No 262
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.68 E-value=6.3e-15 Score=169.21 Aligned_cols=272 Identities=17% Similarity=0.143 Sum_probs=183.0
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|++.|.+. +.++.+|++++.+++..+ . +||+||+++..|+.....+...++..|++++++|. +
T Consensus 52 ~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l~~l--~--pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e 125 (380)
T PRK06176 52 RFALEELIADLEGGVK--GFAFASGLAGIHAVFSLF--Q--SGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLS 125 (380)
T ss_pred HHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHc--C--CCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHH
Confidence 3457789999999876 567789998887655332 3 89999999999999988887777889999998875 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |.+++|-.
T Consensus 126 ~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD-~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d-- 202 (380)
T PRK06176 126 QIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD-NTFATPYYQNPLLLGADIVVHSGTKYLGGHSD-- 202 (380)
T ss_pred HHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCCEEEecCceeccCCcc--
Confidence 5655 7889999999998 68999999999999999999999995 45565555667789999999998 87765421
Q ss_pred CCceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
.-.|++.+++ ++.+++. ..++..|. .. ++. ..|+...|.+.+..
T Consensus 203 -~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~--~~--~~~-----~~~l~~~gl~tl~~ 247 (380)
T PRK06176 203 -VVAGLVTTNNEALAQEIA-------------------------FFQNAIGG--VL--GPQ-----DSWLLQRGIKTLGL 247 (380)
T ss_pred -ceeeEEEecHHHHHHHHH-------------------------HHHHHhcC--CC--CHH-----HHHHHHhccCcHHH
Confidence 1246777654 3333220 00011010 00 111 12344556667777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----CC-----------cceEEEecCC---HHHHHHHHHHc--Cceee---
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----PF-----------FDTVKVKCAD---AHAIASAAYKI--EMNLR--- 500 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~~-----------~~~~~i~~~~---~~~l~~~L~~~--Gi~~~--- 500 (985)
+.+++.+++..+.+.|++...+. ++.+ +. ..-++|.+++ +.++.+.|.=. +..+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 327 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVE 327 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCC
Confidence 88888899999999999874453 3211 11 1236666654 33344443311 11110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 501 ------------~----------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
. +.++.+|+|++.-+.++-|+.|.++|.
T Consensus 328 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~ 377 (380)
T PRK06176 328 SLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFA 377 (380)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0 114678999988776666677777765
No 263
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.68 E-value=1.2e-14 Score=168.05 Aligned_cols=293 Identities=14% Similarity=0.119 Sum_probs=178.5
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--cc-ceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~--~~-~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|.+ .. .+..++| +++.. .+++.+. .++++|+++++.+..+...++..|++
T Consensus 67 ~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~G~~ 138 (383)
T TIGR03540 67 EGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA---HIPLAFV-----NPGDIVLVPDPGYPVYRIGTLFAGGE 138 (383)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH---HHHHHhC-----CCCCEEEEeCCCCcchHHHHHhcCCE
Confidence 576666666666766666653 33 3544444 44432 2233221 46789999998887777778899999
Q ss_pred EEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cCC-
Q 001990 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL- 776 (985)
Q Consensus 704 v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g~- 776 (985)
++.+|.+.+ ..+|++++++++. +++++|++++| |++|.+.+ .+++|+++|+++|+++++|+++..-. .+.
T Consensus 139 v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 139 PYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred EEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 999998743 4579999999886 68899999998 58999872 38999999999999999999974211 110
Q ss_pred -CCCC----cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 -TSPG----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 -~~~g----~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
.... .....+.+.|+.|+|+. .|.++|+++.++++.+.+.... .......+ ..
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~g~----~GlRiG~~i~~~~l~~~~~~~~------------~~~~~~~~------~~ 273 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTYNM----TGWRIGMAVGNADLIAGLGKVK------------TNVDSGVF------QA 273 (383)
T ss_pred CcCcccCCCcccCEEEEEecccccCC----ccceeeEEeCCHHHHHHHHHHH------------HhcccCCC------hH
Confidence 0101 11234667788888743 3678999998877665432100 00000111 01
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-H
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e 929 (985)
...++..++. -+.+-+.+..+...++.+++.+.|++ ++.+ ..+.+.++ +.+.++ .+.+..++.+.|. +
T Consensus 274 ~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~~~~~~~--~~~~l~-----~~~~~~~~~~~ll~~ 343 (383)
T TIGR03540 274 IQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKIGIDV--EKPKATFY--VWVPVP-----EGYTSAEFAARLLEE 343 (383)
T ss_pred HHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCEe--cCCCcceE--EEEECC-----CCCCHHHHHHHHHHH
Confidence 1111222232 12333444555667778888888887 3332 22222221 334543 2467788998875 6
Q ss_pred CCCccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 930 YGFHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 930 ~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
+||.+... .|+ .++.+|+++. .+++++. +.++.|
T Consensus 344 ~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~---~~l~~l 380 (383)
T TIGR03540 344 TGVVVTPGVGFGEYGEGYIRISLT--VPDERLE---EAVARI 380 (383)
T ss_pred CCEEEecchhhCccCCCeEEEEec--CCHHHHH---HHHHHH
Confidence 79987532 233 2468999986 3455555 444444
No 264
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.68 E-value=9e-15 Score=169.63 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=178.8
Q ss_pred hhcHHHHHHHHHHHHHHHhCC--Ccc-ceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGF--DSF-SLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~--~~~-~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
.+|..++.+.+.+++.+.+|. +.. .+.. +++++|... +++.+. .++++|+++++.|..+...+...|+
T Consensus 72 ~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~---~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 143 (394)
T PRK05942 72 FEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTH---LALAYV-----NPGDVVLVPSPAYPAHFRGPLIAGA 143 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHH---HHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 357666666666666666674 333 3544 444444422 233221 4678999999988777666778999
Q ss_pred EEEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEcccccccc-C-
Q 001990 703 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV-G- 775 (985)
Q Consensus 703 ~v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~~-g- 775 (985)
+++.+|.+.+ +.+|++++++.++ +++++|++++| |++|.+.+ ++++|.++|+++|+++++|+++..... +
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~ 220 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY 220 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC
Confidence 9999998743 4699999999987 78999999998 57999861 388999999999999999998642110 0
Q ss_pred ----CCC-CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 776 ----LTS-PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 776 ----~~~-~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
+.. ++..+..+.+.|+.|.|+. .|.++|++++++++.+.+.... .....++.+
T Consensus 221 ~~~~~~~~~~~~~~~i~~~SfSK~~~~----~GlRiG~i~~~~~l~~~l~~~~------------~~~~~~~~~------ 278 (394)
T PRK05942 221 QPTSLLEIPGAKDIGVEFHTLSKTYNM----AGWRVGFVVGNRHIIQGLRTLK------------TNLDYGIFS------ 278 (394)
T ss_pred CCCChhhCCCccccEEEEecchhccCC----hhhheeeeecCHHHHHHHHHHH------------hhcccCCCH------
Confidence 100 1111234667777888743 4678999999887765443110 000001111
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH-H
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-M 928 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L-~ 928 (985)
....++..++. ...+.+.+..++..++.+++.+.|++ ++.+ ..+++..+ +.++++ .+.+..++..++ .
T Consensus 279 ~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~~~~~~f--~~~~~~-----~~~~~~~~~~~~l~ 348 (394)
T PRK05942 279 ALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGELGWNI--PPTKATMY--LWVPCP-----VGMGSTDFALNVLQ 348 (394)
T ss_pred HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCee--cCCCeeeE--EEEECC-----CCCCHHHHHHHHHH
Confidence 01111122232 22344555556666777888888876 3332 22222211 234543 135666777654 5
Q ss_pred HCCCccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 929 DYGFHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 929 e~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
++||.+... .|. .++++|+++. ++.+ ++.++|+.+.
T Consensus 349 ~~gV~v~~g~~f~~~~~~~iRis~~-----~~~~---~l~~~l~~l~ 387 (394)
T PRK05942 349 KTGVVVTPGNAFGEGGEGYVRISLI-----ADCD---RLGEALDRLK 387 (394)
T ss_pred HCCEEEeCChhhCcCCCCeEEEEec-----CCHH---HHHHHHHHHH
Confidence 789987432 221 2478999985 2356 6767776654
No 265
>PRK12414 putative aminotransferase; Provisional
Probab=99.68 E-value=4e-15 Score=171.91 Aligned_cols=329 Identities=12% Similarity=0.112 Sum_probs=195.5
Q ss_pred cccccceecccCcccccccccccccc-ccCCCCcchhhhcHHHHHHHHHHHHHHHhCCC--c-c-ceecChHHHHHHHHH
Q 001990 591 MIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--S-F-SLQPNAGAAGEYAGL 665 (985)
Q Consensus 591 ~~~lGs~~~~~~~~~~~~~~~~~~f~-~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~--~-~-~~~~~sGa~g~~a~l 665 (985)
++.|+.+.+.+++..+....-..... ....|.| .+|..++.+.+++++++++|.+ . . .+.+++|+++...+
T Consensus 31 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~- 106 (384)
T PRK12414 31 ALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAP---MAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA- 106 (384)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH-
Confidence 56777776665543332221000000 1122433 3688888889999999999974 2 2 34455555554333
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcc
Q 001990 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHG 743 (985)
Q Consensus 666 ~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G 743 (985)
++.+. .++++|+++++.|..+...++..|.+++.+|.++ ++.+|+++|+++++ +++++|++++| |++|
T Consensus 107 --~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~NPTG 176 (384)
T PRK12414 107 --ISALV-----HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT---PRTRMIIVNTPHNPSA 176 (384)
T ss_pred --HHHhc-----CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC---cccEEEEEcCCCCCCC
Confidence 33221 4678999999888777777788999999999874 46799999999987 68899999998 5799
Q ss_pred ccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC-CCCC-Cc----CCCcEEEeCCcccccccCCCCCCcceeeeeccc
Q 001990 744 VYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTSP-GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 814 (985)
Q Consensus 744 ~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g-~~~~-g~----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~ 814 (985)
.+- .++++|+++|+++|+++++|+++..-. .+ ...+ .. .+--+++.|++|.|+. .|.++|+++++++
T Consensus 177 ~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~----pGlRiG~~v~~~~ 252 (384)
T PRK12414 177 TVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHV----TGWRVGYCLAPAE 252 (384)
T ss_pred cCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccC----ccceEEEEecCHH
Confidence 873 269999999999999999999974211 11 0001 11 1123778888888854 4788999999887
Q ss_pred ccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCee
Q 001990 815 LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (985)
Q Consensus 815 l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~ 893 (985)
++..+.... .....+.+...+ .++..++.. + +.+.+..+...++++++.+.|++ ++.+.
T Consensus 253 l~~~l~~~~--------------~~~~~~~s~~~q----~a~~~~l~~-~-~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ 312 (384)
T PRK12414 253 LMDEIRKVH--------------QFMVFSADTPMQ----HAFAEALAE-P-ASYLGLGAFYQRKRDLLARELAGSRFELL 312 (384)
T ss_pred HHHHHHHHH--------------hheecCCCcHHH----HHHHHHhcC-C-hHHHHHHHHHHHHHHHHHHHHHhCCCeec
Confidence 665432110 000111111111 111122211 1 22333444556777888888887 43322
Q ss_pred EcCCCCceeEEEEEEecCccccCCCCHHHHH-HHHHHCCCccCCCC-CC---C-CCEEEEeccCCCCHHhhchHHHHHHH
Q 001990 894 FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMDYGFHGPTMS-WP---V-PGTLMIEPTESESKVCHNREDLFFQI 967 (985)
Q Consensus 894 ~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~-~~L~e~Gi~~~~~~-~p---v-~~~lris~t~~~t~eeId~~~~~i~a 967 (985)
.+.+.++ +.++++.. .+.+..+++ +.|.++||.+.... |. . .+.+||+++. ++++++ ..++.
T Consensus 313 --~~~gg~~--~~~~~~~~---~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~---~~~~r 380 (384)
T PRK12414 313 --PSEGSFF--MLARFRHF---SDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLV---EGARR 380 (384)
T ss_pred --CCCcceE--EEEccccc---CCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC--CHHHHH---HHHHH
Confidence 2222222 22344311 012344555 55667899864322 21 1 3689999974 577777 66655
Q ss_pred HH
Q 001990 968 LL 969 (985)
Q Consensus 968 L~ 969 (985)
|.
T Consensus 381 l~ 382 (384)
T PRK12414 381 LC 382 (384)
T ss_pred Hh
Confidence 54
No 266
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.68 E-value=9.3e-15 Score=168.59 Aligned_cols=213 Identities=22% Similarity=0.219 Sum_probs=155.6
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
+.++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||+++..|+++...+...++..|++++++|. +
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 137 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMAL-LQ--AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLD 137 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 4568899999999875 678899998888777665 23 88999999999999888776666678999999976 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |+++++ |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD-~t~~~~~~~~pl~~g~Divv~S~sK~~~g~---g 213 (390)
T PRK08133 138 AWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD-NCFCTPALQQPLKLGADVVIHSATKYLDGQ---G 213 (390)
T ss_pred HHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEeecceeecCC---c
Confidence 5656 7889999999998 78999999999999999999999995 44555656667789999999998 877532 1
Q ss_pred CCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 367 GP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
-.-.|++..+++.++++- ...+..|. +.+++ .+ ++...|.+.+..+
T Consensus 214 ~~~GG~vv~~~~~~~~~~-------------------------~~~~~~g~----~~~~~---~a--~~~l~gl~tl~~R 259 (390)
T PRK08133 214 RVLGGAVVGSKELMEEVF-------------------------GFLRTAGP----TLSPF---NA--WVFLKGLETLSLR 259 (390)
T ss_pred ceEeEEEEcCHHHHHHHH-------------------------HHHHHhCC----CCCHH---HH--HHHHcccchHHHH
Confidence 112367777766544320 00011110 11122 11 2234455567778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
.++..+++.+++++|++..+++
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 8888899999999999885465
No 267
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=1.1e-14 Score=169.33 Aligned_cols=297 Identities=12% Similarity=0.141 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|+++++.. ...++.+||+++++++++.+|.|...+|..+|.+||. ..++||....+....+-
T Consensus 85 ~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 164 (422)
T PRK05630 85 AIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWK 164 (422)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccccccccc
Confidence 446788888887432 1347789999999999999998865555434566765 66889976555432221
Q ss_pred ----EEEEEeCCCCCCCC-------HHHHHHHHHhcCCCeEEEEEEc-CC-Ccccccc---CHHHHHHHHHHcCCEEEEE
Q 001990 703 ----KIVSVGTDAKGNIN-------IEELRKAAEANRDNLSTLMVTY-PS-THGVYEE---GIDEICKIIHDNGGQVYMD 766 (985)
Q Consensus 703 ----~v~~v~~~~~g~iD-------le~L~~~i~~~~~~t~~Vvi~~-pn-~~G~i~~---di~eI~~la~~~g~lliVD 766 (985)
.+..+|.......+ .+.+++.+. +++++|+++- .. ..|++.+ .+++|.++|++||+++|+|
T Consensus 165 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~D 241 (422)
T PRK05630 165 GTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIAD 241 (422)
T ss_pred ccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 12334332111112 244555555 6889988875 22 4566542 4899999999999999999
Q ss_pred ccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCC
Q 001990 767 GANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 767 ~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
+++. |+.+.|.+ .+|++++ .|.++ +|-+.+|.+++++++.+.+.... +. +
T Consensus 242 Ev~t----G~GrtG~~~a~~~~gv~PDi~t~--gK~l~----gG~~p~~av~~~~~i~~~~~~~~-~~-----------~ 299 (422)
T PRK05630 242 EIAT----GFGRTGELFATLAAGVTPDIMCV--GKALT----GGFMSFAATLCTDKVAQLISTPN-GG-----------G 299 (422)
T ss_pred ccee----CCCcCchhhHHHhcCCCCCeeee--echhh----cCccccceeeccHHHHHHHhccC-CC-----------C
Confidence 9872 33334322 3688865 47663 33245677778877765542110 00 0
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEecCccc
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN 914 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~~~~~~ 914 (985)
.....+++.|++..++++.+.|+.+.++.+ .++..++.++|++.|++. ...+ ..|. + .+ +-+.+..
T Consensus 300 ~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~-G-l~--~~ie~~~--- 369 (422)
T PRK05630 300 ALMHGPTFMANPLACAVAHASLEIIETGMW---RKQVKRIEAELIAGLSPLAHLPGVADVRVL-G-AI--GVVEMEQ--- 369 (422)
T ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHhhcCCCeeeeecc-c-cE--EEEEECC---
Confidence 000112344567777778888888866644 346667778888877641 1111 1111 1 11 2233321
Q ss_pred cCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 915 ~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
..+...+.+.+.++|+++... .+.+|+.|....|++||| +++++|+++++.
T Consensus 370 --~~~~~~~~~~~~~~Gl~~~~~----g~~l~~~PpL~it~~~i~---~~~~~l~~al~~ 420 (422)
T PRK05630 370 --PVDMEEATQAAVDHGVWLRPF----GRLVYVMPPYITTSEQIA---QICAALAAAVKA 420 (422)
T ss_pred --cccHHHHHHHHHHCCeEEEec----CCEEEEECCccCCHHHHH---HHHHHHHHHHhc
Confidence 123568889999999997532 378999999999999999 999999988753
No 268
>PRK04311 selenocysteine synthase; Provisional
Probab=99.68 E-value=1.5e-14 Score=168.53 Aligned_cols=278 Identities=18% Similarity=0.164 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHH--HHHHhhcCCCeEEEEeCc
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTID--ICITRADGFDIKVVVSDL 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~--~~~~~a~~~gi~v~~~~~ 288 (985)
+.+.++++.+|+|+|++. +.+++++++++..++.++ . +||+||+++.+|.++-. .+....+..|+++++++.
T Consensus 127 ~r~~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l--~--~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~ 200 (464)
T PRK04311 127 SRDRALAALLCALTGAED--ALVVNNNAAAVLLALNAL--A--AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT 200 (464)
T ss_pred hHHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh--C--CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC
Confidence 446678899999999985 678889987776555443 2 88999999988763211 011223457999988864
Q ss_pred ------hhhhc-cCCCEeEEEEEcC-CC--Ce--eeccHHHHHHHHHhCCcEEEEEeccc------cccC-----CCCCC
Q 001990 289 ------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHANGVKVVMATDLL------ALTI-----LKPPG 345 (985)
Q Consensus 289 ------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~dl~~I~~~a~~~galliV~a~~~------alg~-----l~~p~ 345 (985)
+++++ ++++|++|++.++ |+ +| .+.|+++|+++||++|++++||+-.. .+|+ +..+.
T Consensus 201 ~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l 280 (464)
T PRK04311 201 TNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELL 280 (464)
T ss_pred CCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHH
Confidence 45666 8899999998876 54 44 56799999999999999999954110 1111 12234
Q ss_pred cccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchh
Q 001990 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (985)
Q Consensus 346 ~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~ 424 (985)
++|+|++++|+ |+| |||++|++++++++++++...-++ +.+ |-.| .
T Consensus 281 ~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~--------r~l-----------r~dk--------~ 327 (464)
T PRK04311 281 AAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLK--------RAL-----------RVDK--------L 327 (464)
T ss_pred hcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhH--------HHH-----------hcch--------H
Confidence 69999999999 665 466789999999988876321111 000 0111 1
Q ss_pred HHHHHHHHH--HH----HHcCcchH---HHHHHHHHHHHHHHHHHHhcCC--CE--EEcCC---------C--CcceEE-
Q 001990 425 ALLANMAAM--YA----VYHGPEGL---KTIAQRVHGLAGTFALGLKKLG--TV--EVQGL---------P--FFDTVK- 479 (985)
Q Consensus 425 ~l~a~~aa~--y~----~~~g~~Gl---~~i~~~~~~~a~~l~~~L~~~g--~~--~~~~~---------~--~~~~~~- 479 (985)
.+.++.+.+ |+ ++.+-.++ ....+++.++|..++++|++.. ++ ++... | ..+++.
T Consensus 328 ~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v 407 (464)
T PRK04311 328 TLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAV 407 (464)
T ss_pred HHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEE
Confidence 233333333 21 12223332 2233556678888888887652 23 34311 1 134444
Q ss_pred -EecCC--HHHHHHHHHHcC--ceeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 480 -VKCAD--AHAIASAAYKIE--MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 480 -i~~~~--~~~l~~~L~~~G--i~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+...+ +.++.++|++.. |..+ +..+.+.+-+-.. .++|++.+++.|..
T Consensus 408 ~~~~~~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~r~~-~~~~~~~~~~~~~~ 460 (464)
T PRK04311 408 TLTPKDRSLEALAARLRLLPPPVIGR-IEDGRLLLDLRTL-EEEDEERLAAALLE 460 (464)
T ss_pred EEeCCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCcC-CHHHHHHHHHHHHH
Confidence 44333 889999998754 3333 3456666655433 56788888887763
No 269
>PLN02590 probable tyrosine decarboxylase
Probab=99.68 E-value=2.8e-14 Score=168.35 Aligned_cols=360 Identities=12% Similarity=0.078 Sum_probs=214.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCCc-c--ceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHH
Q 001990 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 215 (985)
Q Consensus 139 ~~lp~~~~~~se~e~~~~~~~~~~~n~~-~--~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e 215 (985)
..+| ..+.+-.++++++.+.-..... + ..|.|-=.-+...++.+.+-+.+ .|-+ ..+.-+.+.+.-+...+
T Consensus 101 ~~~P--~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~s--a~n~--~~~~~~~sPa~t~lE~~ 174 (539)
T PLN02590 101 DSAP--ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNA--GLSV--VGFTWLTSPAATELEII 174 (539)
T ss_pred CCCC--CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHH--hccc--ccCCcccCchhHHHHHH
Confidence 3466 4667778999999876544321 1 12222211011134444432222 1100 22333456666677778
Q ss_pred HHHHHHHhhCCCC-------cceeeccchHHHHHHHHHHhhhh-c---C----CCCEEEEcCCCChhHHHHHHHhhcCCC
Q 001990 216 FQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-K---G----KKKTFIIASNCHPQTIDICITRADGFD 280 (985)
Q Consensus 216 ~q~~ia~L~g~~~-------~~~sl~~~~ta~~ea~~~a~~~~-~---~----~g~~Vlv~~~~h~s~~~~~~~~a~~~g 280 (985)
.-+++++|+|++. +...+++|||.+.-.++++.|-. . + ++-.|++|+..|.|+.+.++.+ +.|
T Consensus 175 vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il--Glg 252 (539)
T PLN02590 175 VLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG--GIH 252 (539)
T ss_pred HHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc--CCC
Confidence 8899999999986 34567788875544333333321 0 0 2225667889999999887643 232
Q ss_pred e-EEEEeCc----------hhhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC
Q 001990 281 I-KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 341 (985)
Q Consensus 281 i-~v~~~~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l 341 (985)
- .++.++. ++|++ +.. ...+|+.+.. +.+|.++||++|+++|+++|++++||+-.-+..++
T Consensus 253 ~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~ 332 (539)
T PLN02590 253 EENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACI 332 (539)
T ss_pred cccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhc
Confidence 1 2444432 34544 422 2567777876 46999999999999999999999995421111112
Q ss_pred CCC------CcccceEEEecC-ccccccCCCCCCceEEEEEchh--hHhcC--CCceeeeeecCCC-Cc---ceEEeccc
Q 001990 342 KPP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSG-KP---ALRVAMQT 406 (985)
Q Consensus 342 ~~p------~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~--~~~~l--p~~~vG~s~d~~g-~~---~~~l~l~t 406 (985)
.+. +--.||-+..+. |+++.|+. +|++.++++ +.+.+ .+..+....+..+ .. .+.+.+
T Consensus 333 ~~~~r~~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l-- 405 (539)
T PLN02590 333 CPEYRKFIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL-- 405 (539)
T ss_pred ChhhHHHhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC--
Confidence 111 223489999999 77788864 567888863 22222 1111110000000 00 011111
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC--
Q 001990 407 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-- 484 (985)
Q Consensus 407 re~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-- 484 (985)
-||.. ++ .+-.+ +..+|.+|++++.+++.++|+|+.+.|++.++|+++.++.+..|+|+...
T Consensus 406 ----sRr~r---------aL-klW~~--lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~ 469 (539)
T PLN02590 406 ----SRRFR---------SL-KLWMV--LRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD 469 (539)
T ss_pred ----CCchH---------HH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCC
Confidence 13321 11 12222 47899999999999999999999999999856999987778788886531
Q ss_pred ---------HHHHHHHHHHcCce-eeee--c-CCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001990 485 ---------AHAIASAAYKIEMN-LRVV--D-SNTVTASFDE-TTTLEDVDKLFIVFAG 529 (985)
Q Consensus 485 ---------~~~l~~~L~~~Gi~-~~~~--~-~~~lris~~~-~~t~edid~ll~~l~~ 529 (985)
..++.++|.+.|.. +... . .-.+|+|+.. .++++|++.+++.|..
T Consensus 470 ~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~ 528 (539)
T PLN02590 470 GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQK 528 (539)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 24566666666663 3322 1 2578999865 6679999999999874
No 270
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.68 E-value=6.1e-15 Score=170.69 Aligned_cols=274 Identities=16% Similarity=0.161 Sum_probs=188.3
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||++...|+++...+...++..|++++++|. ++
T Consensus 67 ~~Le~~iA~~~g~~~--~l~~~sG~~Ai~~al~~l-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 141 (400)
T PRK06234 67 TEVENKLALLEGGEA--AVVAASGMGAISSSLWSA-LK--AGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE 141 (400)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 357789999999864 678899998887776654 23 89999999999999888876666778999999875 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~--galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~ 365 (985)
+++ ++++|++|++.+| |++|.+.|+++|+++||++ |++++|| +..+.+....|.++|+||+++|. |.++++
T Consensus 142 l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD-ea~~~~~~~~~l~~g~Divv~S~sK~l~g~--- 217 (400)
T PRK06234 142 VRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD-NTFCTPYIQRPLQLGADVVVHSATKYLNGH--- 217 (400)
T ss_pred HHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE-CCCCchhcCCchhhCCcEEEeeccccccCC---
Confidence 555 7788999999998 6899999999999999997 8999995 45566655667788999999998 877632
Q ss_pred CCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 366 GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
|...+|++++++++.+++. ..+ .+ ...| . +.+++ .+ ++...+.+-+..
T Consensus 218 g~~~gG~v~~~~~~~~~l~--~~~-------~~--------------~~~g-~---~l~p~---~a--~l~~~~l~tl~~ 265 (400)
T PRK06234 218 GDVIAGFVVGKEEFINQVK--LFG-------IK--------------DMTG-S---VIGPF---EA--FLIIRGMKTLQI 265 (400)
T ss_pred CCceeEEEEecHHHHHHHH--HHH-------HH--------------HhcC-C---CCCHH---HH--HHHHhccCcHHH
Confidence 2223589999888766541 000 00 0001 0 00222 11 123444555667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHHcCce--ee--
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYKIEMN--LR-- 500 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~----~~~l~~~L~~~Gi~--~~-- 500 (985)
+.++..+++.++++.|++...+. +. .. + +..-|+|.+++ +.++.+.|.-.++- +.
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~ 345 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDA 345 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCC
Confidence 77888899999999999875343 22 11 1 11246777654 44555555433321 10
Q ss_pred -e----------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 501 -V----------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 501 -~----------------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
. +.++.+|+|++.-+.++-|+.|.++|.
T Consensus 346 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 396 (400)
T PRK06234 346 ETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALD 396 (400)
T ss_pred CceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 124679999998876666677777775
No 271
>PRK06105 aminotransferase; Provisional
Probab=99.68 E-value=1.5e-14 Score=169.90 Aligned_cols=311 Identities=15% Similarity=0.145 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 633 MFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
...++.+.|++++..+. ..++.+||+++++++++.+|.|...+|..++.+||. ...+||.........|.
T Consensus 93 ~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~ 172 (460)
T PRK06105 93 PVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFD 172 (460)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccC
Confidence 34578888999875432 347789999999999999887765555434566775 67889977544322111
Q ss_pred ----EEEEEeCCCCCC-------------CCHHHHHHHHHhc-CCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcC
Q 001990 703 ----KIVSVGTDAKGN-------------INIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (985)
Q Consensus 703 ----~v~~v~~~~~g~-------------iDle~L~~~i~~~-~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g 760 (985)
.+..+|...... ..++++++++.+. .+++++|+++.. ...|.+.+ -++++.++|++||
T Consensus 173 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~ 252 (460)
T PRK06105 173 LPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYD 252 (460)
T ss_pred CCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 123333211000 1246788887532 357888888643 45677651 2999999999999
Q ss_pred CEEEEEccccccccCCCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCC
Q 001990 761 GQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (985)
Q Consensus 761 ~lliVD~a~~~~~~g~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~ 832 (985)
+++|+|+++. |+.+.|+ .-+|++++ .|.+ ++|.-.+|.+++++++.+.+.... .
T Consensus 253 ~llI~DEv~t----G~GRtG~~f~~~~~~v~PDi~~~--gK~l----ggG~~P~~av~~~~~i~~~~~~~~-~------- 314 (460)
T PRK06105 253 ILLVADEVIC----GFGRTGNMFGCETFGIKPDILVM--SKQL----SSSYQPLSAVLMNEKVYDPIADES-G------- 314 (460)
T ss_pred CeEEEecccc----CCCcCchhhhHHhcCCCCCeeee--eccc----ccCcccceEEEEcHHHHHHHhccc-c-------
Confidence 9999999872 3333332 23788865 3766 334322566777777665443110 0
Q ss_pred CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEE
Q 001990 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 908 (985)
Q Consensus 833 ~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~ 908 (985)
..+.....+++.|+++.++++.+.|..+.++++ .++..++.++|+++|++. +.++ +.|. + .+ +.+.
T Consensus 315 ---~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l---~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~-G-l~--~gie 384 (460)
T PRK06105 315 ---KIGTFGHGFTASGHPVAAAVALENLAIIEERDL---VGNAAERGARLQARLRALADHPLVGEVRGV-G-LI--AAVE 384 (460)
T ss_pred ---cCcccccCCCCCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhhcCCCeEEEEec-c-eE--EEEE
Confidence 000000112344567777778888888876654 346667778888888752 2221 1121 1 11 1222
Q ss_pred ecCccc-cCCC-----CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 909 LRGLKN-TAGI-----EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 909 ~~~~~~-~~g~-----~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
+...+. .... ....+...+.++|+.+... .+.+|++|....|++||| ++++.|.++++++..-
T Consensus 385 ~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----g~~i~l~Ppl~it~~eid---~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 385 LVADKATKTPFEPPGKVGARANAAAHEHGVISRAM----GDTLAFCPPLIITAAQVD---EMVDRFGRALDDVAAW 453 (460)
T ss_pred EecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----CCEEEEECCCccCHHHHH---HHHHHHHHHHHHHHHH
Confidence 210000 0000 1246788888999997532 368999999999999999 9999999999877543
No 272
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.68 E-value=9.9e-16 Score=164.14 Aligned_cols=316 Identities=15% Similarity=0.173 Sum_probs=211.4
Q ss_pred cceecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHH
Q 001990 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (985)
Q Consensus 167 ~~~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~ 246 (985)
.++|+|++-+|....+.-+ . +.+.+-.. ..-+-..|+-+-..+++..+|+|-+-|. +.+|.+.--+..+.+.
T Consensus 178 SNDYLgms~Hp~V~~A~~~-t-l~~hG~GA----GGTRNIsG~s~~hv~LE~eLA~LHqK~a--ALlFsSCfVANDstLf 249 (570)
T KOG1360|consen 178 SNDYLGMSRHPEVLDAMHD-T-LDRHGAGA----GGTRNISGHSKHHVRLEAELADLHQKEA--ALLFSSCFVANDSTLF 249 (570)
T ss_pred cCccccccCChHHHHHHHH-H-HHHcCCCc----CCccccCCCCchhhhHHHHHHHHhcCcc--eeeeeeeeeccchHHH
Confidence 4679999987755555442 2 33322211 1223345666777889999999999887 4555555444444443
Q ss_pred HhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-c---CC-CEeEEEEEcC-CCCeeeccHHHHHH
Q 001990 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SG-DVCGVLVQYP-GTEGEVLDYGDFIK 320 (985)
Q Consensus 247 a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~-l---~~-~t~~V~v~~p-n~~G~i~dl~~I~~ 320 (985)
.+. .+-++-+|+.++..|.|.+..++. ++--.+.+++.|+++|++ + ++ -.+.|.+... ++.|.|.|++||++
T Consensus 250 tLa-k~lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcD 327 (570)
T KOG1360|consen 250 TLA-KKLPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCD 327 (570)
T ss_pred HHH-HHCCCcEEeccccchHHHHHHhhh-cCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHH
Confidence 222 111788888888999999999976 444566778889888876 3 33 3566767665 79999999999999
Q ss_pred HHHhCCcEEEEEeccccccCCCCCCc---------ccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeee
Q 001990 321 NAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (985)
Q Consensus 321 ~a~~~galliV~a~~~alg~l~~p~~---------~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~ 390 (985)
++|++|++..++ +.++.|+..+-|. .-+||+.|+. |+||. .| ||++.+..+++.+...
T Consensus 328 vah~yGAiTFlD-EVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VG----GYIAat~~LvDmiRSy---- 395 (570)
T KOG1360|consen 328 VAHKYGAITFLD-EVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VG----GYIAATRKLVDMIRSY---- 395 (570)
T ss_pred HHHHhCceeeee-hhhhhccccCCCCCccccCCcchhhhhcccchhhhccc---cc----ceehhhhhHHHHHHHh----
Confidence 999999999994 5667776654321 2379999997 99973 34 6898888877654211
Q ss_pred eecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc
Q 001990 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ 470 (985)
Q Consensus 391 s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~ 470 (985)
-.+|-++-+ - .+..+.+...++- -+-..|| +.+++...++..|+++.|.++| +.++
T Consensus 396 ------AaGFIFTTS-L--------------PP~vl~GAleaVr-~lk~~eg-~~lR~~hqrnv~~~kq~l~~~G-iPVi 451 (570)
T KOG1360|consen 396 ------AAGFIFTTS-L--------------PPMVLAGALEAVR-ILKSEEG-RVLRRQHQRNVKYVKQLLMELG-IPVI 451 (570)
T ss_pred ------cCceEEecC-C--------------ChHHHHhHHHHHH-HHhhhhh-HHHHHHHHHHHHHHHHHHHHcC-Cccc
Confidence 122444321 0 0123444445541 1223445 3455667789999999999998 8877
Q ss_pred CCCCcceEEEecCC---HHHHHHHHH-HcCceeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 471 GLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 471 ~~~~~~~~~i~~~~---~~~l~~~L~-~~Gi~~~~~-----~--~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..| .+.+.+.+.+ +.++.+.|. ++||++-.+ . .+.+|+.+|+.+|.+-++.|++++..
T Consensus 452 ~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~ 520 (570)
T KOG1360|consen 452 PNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLD 520 (570)
T ss_pred CCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHH
Confidence 433 3345555444 677777777 469987543 1 37899999999999999999998863
No 273
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.68 E-value=1.5e-14 Score=164.70 Aligned_cols=298 Identities=16% Similarity=0.137 Sum_probs=197.1
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhh
Q 001990 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (985)
Q Consensus 172 G~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~ 251 (985)
+.|.+|...|+.+.+++.+..+..+.|.+- ++ .++++.+|+++|+++.++.+++|+|.++..+++++. .
T Consensus 25 ~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----~~-----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-~ 93 (346)
T TIGR01141 25 NSNENPFGPPPKAKEALRAEADKLHRYPDP-----DP-----AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-E 93 (346)
T ss_pred cCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----CH-----HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc-C
Confidence 556667767777665655432222334221 11 368899999999988889999999988776666542 2
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001990 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (985)
Q Consensus 252 ~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~ 321 (985)
+||+|++++..|+.+...+ +..|++++.++. +++++ +++++++|++++| |++|.+.|++++.++
T Consensus 94 --~gd~v~~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 94 --PGDAVLVPPPTYSMYEISA----KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred --CCCEEEEcCCCHHHHHHHH----HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 7899999998887655544 346888887754 34444 5778999999988 789999999999999
Q ss_pred HHhC--CcEEEEEecccc-ccCCCCC----CcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeec
Q 001990 322 AHAN--GVKVVMATDLLA-LTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (985)
Q Consensus 322 a~~~--galliV~a~~~a-lg~l~~p----~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d 393 (985)
++.+ |+++++|. ..+ +.....+ ...+-+++++|. |+|+.| |+.+|++++++++++++....
T Consensus 168 ~~~~~~~~~ii~D~-~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G~r~G~~~~~~~~~~~~~~~~------ 236 (346)
T TIGR01141 168 LERTPEDALVVVDE-AYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLA----GLRIGYAIANAEIIDALNKVR------ 236 (346)
T ss_pred HHhCCCCcEEEEEC-chhhhcCCccHHHHHhhCCCEEEEehhhHhhhch----hhhceeeecCHHHHHHHHhcc------
Confidence 9887 99999842 222 2111011 123335667776 887533 456899999888777652100
Q ss_pred CCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 001990 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (985)
Q Consensus 394 ~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~ 473 (985)
.+.+.+ +....+..+ ++.. ...++++.++..++.+++++.|+++.|+++.+..
T Consensus 237 ----------------------~~~~~~-~~~~~~~~~--~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 289 (346)
T TIGR01141 237 ----------------------APFNLS-RLAQAAAIA--ALRD--DDFIEKTVEEINAERERLYDGLKKLPGLEVYPSD 289 (346)
T ss_pred ----------------------CCCCCC-HHHHHHHHH--HhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCc
Confidence 001111 111111111 1111 1247778888889999999999988338865421
Q ss_pred CcceEEEecCC-HHHHHHHHHHcCceeeeec-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 474 FFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 474 ~~~~~~i~~~~-~~~l~~~L~~~Gi~~~~~~-----~~~lris~~~~~t~edid~ll~~l~ 528 (985)
..-+.+..+. +.++.++|.++||.+.... ++.+|+|++ +++|+++++++|+
T Consensus 290 -g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 -ANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred -CCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 1234455553 7889999999999875432 588999976 8999999999874
No 274
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.68 E-value=9.5e-15 Score=167.01 Aligned_cols=274 Identities=18% Similarity=0.183 Sum_probs=180.3
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe
Q 001990 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~ 286 (985)
.|......++++.+++++|.+. ..++.+|+.++.+++.++ .. +||+|++++..|+++...++. .|.+++.+
T Consensus 57 ~g~~~~~~~l~~~la~~~~~~~--~i~~~~G~~~~~~~l~~~-~~--~gd~v~~~~~~~~~~~~~~~~----~g~~~~~~ 127 (360)
T TIGR00858 57 SGNSPLHEELEEELAEWKGTEA--ALLFSSGYLANVGVISAL-VG--KGDLILSDALNHASLIDGCRL----SGARVRRY 127 (360)
T ss_pred cCCcHHHHHHHHHHHHHhCCCC--EEEECchHHHHHHHHHHh-CC--CCCEEEEEccccHHHHHHHHh----cCCceEEe
Confidence 3444556678899999999653 445555565555544443 23 789999999999999887653 46666665
Q ss_pred C---chhhhc-cC----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC----------Ccc
Q 001990 287 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GEL 347 (985)
Q Consensus 287 ~---~~~l~~-l~----~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p----------~~~ 347 (985)
+ ++++++ ++ +++++|++.++ |.+|.+.|+++|.++|+++|+++++| +..+.+.+... ...
T Consensus 128 ~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD-DAHGTGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred cCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE-CcccccCcCCCCCchHHhcCCCcc
Confidence 4 456665 43 35777777776 67999999999999999999999994 33343322110 124
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001990 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (985)
Q Consensus 348 GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l 426 (985)
+.||+++|. |.|+. +| |++..++++.+.+... ...+.. .+ -+++...
T Consensus 207 ~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~----------~~~~~~-------------~~--~~~~~~~ 254 (360)
T TIGR00858 207 PVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINR----------ARTLIF-------------ST--ALPPAVA 254 (360)
T ss_pred CCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHh----------Ccccee-------------cC--CCCHHHH
Confidence 789999987 87753 23 6888887776654100 000000 00 0112223
Q ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee-
Q 001990 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (985)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~- 502 (985)
.+..+++ .++. .++++.++..++.+++.+.|+++| +++... ...-+.+..+. ..++.++|.++||.+...
T Consensus 255 ~a~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 255 AAALAAL--ELIQ--EEPWRREKLLALIARLRAGLEALG-FTLMPS-CTPIVPVIIGDNASALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HHHHHHH--HHHh--hCHHHHHHHHHHHHHHHHHHHHcC-CccCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 3333443 2221 235677889999999999999887 776532 12234455543 678999999999988531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 503 ------~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
..+.+|++++.+++++|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 13589999999999999999999874
No 275
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.68 E-value=4.1e-15 Score=168.59 Aligned_cols=281 Identities=17% Similarity=0.144 Sum_probs=175.2
Q ss_pred cHHHHHHHHHHHHHHHhCCCcc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEc---CCCCCCcHHHHHhcCcEE
Q 001990 629 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP---VSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~~~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~---~~~Hg~~~~~~~~~G~~v 704 (985)
|..+.+.++++++|+++|.+.. .+.+++|.+++.+++.++. +++++||++ ...|.++...+++.|.++
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--------~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~ 122 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--------PPGRKVVHYLPEKPAHPSIPRSCKLAGAEY 122 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--------CCCCEEEECCCCCCCchhHHHHHHHcCCEE
Confidence 4557888999999999999543 4667778877755554432 467888874 357777777788889886
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccc--cCHHHHHHHHHHcCCEEEEEccccccccCC-C--CC
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL-T--SP 779 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~g~-~--~~ 779 (985)
... .|+++++. . +++++|+++..+++|.+- .|+++|+++|+++|++++||+||..+..+. . ..
T Consensus 123 ~~~-------~~l~~l~~--~---~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 123 FES-------DELSELKK--I---DGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred ecc-------CCHHHHhh--C---cCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH
Confidence 332 25666432 1 567888887667788872 279999999999999999999996543221 1 11
Q ss_pred CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHH
Q 001990 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (985)
Q Consensus 780 g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~ 859 (985)
..++.|+++.+++|++ +|+.+|++++++++++.+.... +... .+. ++....++.+.
T Consensus 191 ~~~~~divv~s~SKal------aG~r~G~v~~~~~li~~l~~~~-----------~~~~---~s~----~~~~~~aa~~a 246 (346)
T TIGR03576 191 LDLGADLVVTSTDKLM------DGPRGGLLAGRKELVDKIKSVG-----------EQFG---LEA----QAPLLAAVVRA 246 (346)
T ss_pred HHcCCcEEEeccchhc------cccceEEEEeCHHHHHHHHHhh-----------cCcc---cCc----cHHHHHHHHHH
Confidence 2346799999999965 4688999999988776553210 0001 111 11222333444
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCH-HHHHHHHHHCCCccCCC-
Q 001990 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEP-EDVAKRLMDYGFHGPTM- 937 (985)
Q Consensus 860 l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~-~~l~~~L~e~Gi~~~~~- 937 (985)
|..+. .....+...++.+++.+.+++ +.+. +.+ .+-+.++++ +.+. +.+.+.|.++||.+...
T Consensus 247 L~~~~---~~~~~~~l~~r~~~~~~~l~~-~~~~-~~~----~~f~~~~~~------~~~~~~~~~~ll~~~gV~v~~~~ 311 (346)
T TIGR03576 247 LEEFE---LSRIRDAFKRKEEVYLRLFDK-LNVE-RTP----TGFVIKGVE------EEKLIEIGLDLLRNYGIITITAV 311 (346)
T ss_pred Hhhcc---HHHHHHHHHHHHHHHHHHHHh-CCCC-cCC----CeEEEEeCC------CCCHHHHHHHHHHhCCEEEeCCc
Confidence 44332 223334455666666666663 4432 211 122344553 1223 44556667789987543
Q ss_pred CCC-CCCEEEEeccCCC-CHHhhchHHHHHHHHHHH
Q 001990 938 SWP-VPGTLMIEPTESE-SKVCHNREDLFFQILLSL 971 (985)
Q Consensus 938 ~~p-v~~~lris~t~~~-t~eeId~~~~~i~aL~~i 971 (985)
.++ .++++|||+.... ++.|++ +|+++|++.
T Consensus 312 ~f~~~~~~vRis~~~~~~~~~~~~---~~~~al~~~ 344 (346)
T TIGR03576 312 GMPGASKTLRFDLAAKDAERIGDD---YLVEAVKDS 344 (346)
T ss_pred ccCCCCCeEEEEEecChHHhcCHH---HHHHHHHhc
Confidence 233 3689999986322 223788 999999864
No 276
>PRK03321 putative aminotransferase; Provisional
Probab=99.68 E-value=1.9e-15 Score=172.51 Aligned_cols=281 Identities=12% Similarity=0.123 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.+++++|++...+..++|+++. ...+++.. ..++++|+++...+..++..++..|++++.++.++++
T Consensus 59 ~~~lr~~ia~~~~~~~~~I~~~~G~~~~--l~~~~~~~-----~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 59 AVELRAALAEHLGVPPEHVAVGCGSVAL--CQQLVQAT-----AGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDH 131 (352)
T ss_pred HHHHHHHHHHHhCcCHHHEEECCCHHHH--HHHHHHHh-----cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCC
Confidence 4578889999999877666666666532 22222222 1467899998775555555677899999999988678
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEcccccccc-CCCCCC----cCCCc
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQV-GLTSPG----YIGAD 785 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~~-g~~~~g----~~g~D 785 (985)
.+|+++++++++ +++++|++++| |++|.+. |.++|.++|+. +|+++++|+++..-.. +...+. ....+
T Consensus 132 ~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 132 THDLDAMAAAIT---DRTRLIFVCNPNNPTGTVV-TPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN 207 (352)
T ss_pred CCCHHHHHHhhc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC
Confidence 899999999997 68889999998 5799998 89999999987 5999999998742111 100010 11123
Q ss_pred -EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 786 -VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 786 -i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
+++.|+.|.|+. .|.++|++++++++++.+.... .+.+.+ .....++.+.+. .
T Consensus 208 vi~~~S~SK~~g~----~GlRiG~~v~~~~~~~~~~~~~----------------~~~~~s----~~~q~~a~~~l~--~ 261 (352)
T PRK03321 208 VVVLRTFSKAYGL----AGLRVGYAVGHPEVIAALRKVA----------------VPFSVN----SLAQAAAIASLA--A 261 (352)
T ss_pred EEEEecchHHhhh----HHHhhhhhcCCHHHHHHHHHhc----------------CCCCCC----HHHHHHHHHHhc--C
Confidence 446677787743 3667999999877765543110 001111 111112223332 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCC
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~ 943 (985)
.+.+.+..++..+..+++.+.|++ ++.+ ..+.+.+ +.+++. .+..++.+.|.++||.+.... .+
T Consensus 262 ~~~~~~~~~~~~~~r~~~~~~L~~~~~~~--~~~~g~~---i~i~l~-------~~~~~~~~~l~~~gI~v~~~~---~~ 326 (352)
T PRK03321 262 EDELLERVDAVVAERDRVRAALRAAGWTV--PPSQANF---VWLPLG-------ERTADFAAAAAEAGVVVRPFA---GE 326 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCCCE---EEEeCC-------CCHHHHHHHHHHCCEEEEccC---CC
Confidence 223344444455556778888876 4332 2222221 334432 356789999999999875432 34
Q ss_pred EEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 944 TLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 944 ~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.|||++ .+.++++ +|+++|++++
T Consensus 327 ~iRi~~---~~~~~~~---~~~~al~~~~ 349 (352)
T PRK03321 327 GVRVTI---GAPEEND---AFLRAARAWR 349 (352)
T ss_pred cEEEee---CCHHHHH---HHHHHHHHHh
Confidence 699997 6899999 9999998864
No 277
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.67 E-value=9.5e-15 Score=169.78 Aligned_cols=297 Identities=12% Similarity=0.135 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.++|+++++.+ ...++.+||+++++++++.+|.|...+| +++.+||. ...+||....+....|-
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g-~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 166 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYK 166 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC-CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccC
Confidence 456788888887532 2357789999999999999998865555 34566775 66789876544332110
Q ss_pred ----EEEEEeCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC-C-Ccccccc---CHHHHHHHHHHcCCEEEEEc
Q 001990 703 ----KIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP-S-THGVYEE---GIDEICKIIHDNGGQVYMDG 767 (985)
Q Consensus 703 ----~v~~v~~~~~------g~iDle~L~~~i~~~~~~t~~Vvi~~p-n-~~G~i~~---di~eI~~la~~~g~lliVD~ 767 (985)
.+..+|.... ...|++++++.++++.+++++|+++.. . ..|++.+ .+++|.++|+++|+++|+|+
T Consensus 167 ~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DE 246 (428)
T PRK07986 167 GYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADE 246 (428)
T ss_pred CCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1223332110 124778899989765567888888652 3 3454431 39999999999999999999
Q ss_pred cccccccCCCCCCc------C--CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCCCCCCCC
Q 001990 768 ANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 768 a~~~~~~g~~~~g~------~--g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
+| .++ .+.|. + .+|++++ .|.+ + || --+|.+++++++.+.+.....+.
T Consensus 247 v~-tG~---GrtG~~fa~~~~gv~PDi~t~--gK~l----~-gG~~p~~av~~~~~i~~~~~~~~~~~------------ 303 (428)
T PRK07986 247 IA-TGF---GRTGKLFACEHAGIAPDILCL--GKAL----T-GGTMTLSATLTTREVAETISNGEAGC------------ 303 (428)
T ss_pred cc-cCC---ccCCCeeeecccCCCCCEEEe--chhh----h-CCcccCcchhchHHHHHHhhcCCCCc------------
Confidence 87 333 23332 2 3688864 4766 3 34 23556667777766553210000
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEecCccc
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN 914 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~~~~~~ 914 (985)
....+++.|++..++++.+.|..+.++++ .++..++.++|++.|++. +..+ +.|. + .+ +.+.+..
T Consensus 304 -~~~~~T~~g~p~~~aaa~a~L~~i~~~~~---~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~-G-l~--~~ve~~~--- 372 (428)
T PRK07986 304 -FMHGPTFMGNPLACAVANASLSLLESGDW---QQQVAAIEAQLREELAPLRDAPMVADVRVL-G-AI--GVVETTR--- 372 (428)
T ss_pred -cccCCCCCcCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHhcCCCEEeEecc-c-eE--EEEEeCC---
Confidence 00011233566777778888888866654 456667778888888762 2211 1111 1 12 2233321
Q ss_pred cCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 915 ~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
......+.+.|.++|+++... .+.||++|....|++||| +++++|.+++++
T Consensus 373 --~~~~~~~~~~l~~~Gl~~~~~----g~~i~~~Ppl~it~~ei~---~~~~~l~~~l~~ 423 (428)
T PRK07986 373 --PVNMAALQRFFVEQGVWIRPF----GKLIYLMPPYIILPEQLQ---RLTAAVNRAVQD 423 (428)
T ss_pred --cccHHHHHHHHHHCCcEEEec----CCEEEEeCCCCCCHHHHH---HHHHHHHHHHhh
Confidence 124568899999999987532 368999999999999999 999999988754
No 278
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.67 E-value=6.4e-15 Score=167.47 Aligned_cols=269 Identities=15% Similarity=0.164 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHh-------cCc---
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAM-------CGM--- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~-------~G~--- 702 (985)
..++.+.++++++.+. .++.+||++++++++.++|.| +++++||. ..++||.....+.. .++
T Consensus 68 ~~~la~~l~~~~~~~~-v~~~~SGseA~e~Alklar~~------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~ 140 (364)
T PRK04013 68 KEEMLEELSKWVNYEY-VYMGNSGTEAVEAALKFARLY------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPL 140 (364)
T ss_pred HHHHHHHHHhhcCCCE-EEEeCchHHHHHHHHHHHHHH------hCCCEEEEECCccccCchhhccCCCCcccccCCCCC
Confidence 4578888999887764 467899999999999988876 24567775 66789876554332 111
Q ss_pred --EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccCC
Q 001990 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGL 776 (985)
Q Consensus 703 --~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~ 776 (985)
.+..+|. .|++++++.++ +++++|+++.. ...|.+.+| +++|.++|++||+++|+|+++. |+
T Consensus 141 ~~~~~~~~~-----~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t----G~ 208 (364)
T PRK04013 141 VPGFKHIPF-----NDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS----GL 208 (364)
T ss_pred CCCcEEecC-----CCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh----cC
Confidence 1333343 27899999987 78999988754 345666545 9999999999999999999874 34
Q ss_pred CCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 777 TSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 777 ~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
+.|.+ .+|++++ .|.+ ++|-| +|.+..++++.+ +. ..+++.|
T Consensus 209 -RtG~~~a~~~~gv~PDiv~~--gK~l----ggG~P-~~a~~~~~~~~~---~~-------------------~~~T~~g 258 (364)
T PRK04013 209 -RTGKFLAIEHYKVEPDIVTM--GKGI----GNGVP-VSLTLTNFDVER---GK-------------------HGSTFGG 258 (364)
T ss_pred -CCCchhHHHhcCCCCCEEEe--cccc----cCCce-eEEEEecccccC---CC-------------------cCCCCCc
Confidence 44432 3788876 3766 34445 455555554421 10 0123445
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
+++.++++.+.|..+.++++.+.+++. + ..+...+-....|. + .+ +-+.+. .+...+.+.+.
T Consensus 259 np~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~~~v~~vRG~-G-l~--~gve~~-------~~~~~i~~~~~ 320 (364)
T PRK04013 259 NPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKGERVVTTRGR-G-LM--IGIVLK-------KPVGKYVEELQ 320 (364)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhccCcceeeeeC-c-EE--EEEEeC-------CcHHHHHHHHH
Confidence 777888888999988877765443321 2 23322100011121 1 22 223332 13567889999
Q ss_pred HCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 929 DYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 929 e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
++|+.+.... .+.||+.|+...|++|+| ++++.|++++.++
T Consensus 321 ~~Gll~~~~g---~~vlr~~Ppl~it~~~i~---~~~~~l~~~l~~~ 361 (364)
T PRK04013 321 NRGYLVHTAG---QRVIRLLPPLIISKDTME---EAKSAIEGVINDI 361 (364)
T ss_pred hCCcEEeeCC---CCEEEEeCCcccCHHHHH---HHHHHHHHHHHHH
Confidence 9999875332 378999999999999999 9999999988764
No 279
>PRK08912 hypothetical protein; Provisional
Probab=99.67 E-value=1.1e-14 Score=168.54 Aligned_cols=301 Identities=14% Similarity=0.113 Sum_probs=183.7
Q ss_pred hhcHHHHHHHHHHHHHHHhCC--Ccc-cee-cChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGF--DSF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~--~~~-~~~-~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
.+|..++.+.+.+++.+.+|. +.. .+. +++++++... +++.+. .++++|+++.+.|+.+...++..|+
T Consensus 62 ~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~---~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~ 133 (387)
T PRK08912 62 MMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA---ALLALV-----EPGDEVVLFQPLYDAYLPLIRRAGG 133 (387)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH---HHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCC
Confidence 367666666666676666664 333 444 4444544422 222221 3678999999988777777889999
Q ss_pred EEEEEeCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC--
Q 001990 703 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-- 775 (985)
Q Consensus 703 ~v~~v~~~~-~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g-- 775 (985)
+++.+++++ ++.+|+++++++++ +++++|++++| |++|.+. .++++|.++|+++|+++++|+++.... .+
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 210 (387)
T PRK08912 134 VPRLVRLEPPHWRLPRAALAAAFS---PRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRR 210 (387)
T ss_pred EEEEEecCcccCcCCHHHHHHHhC---ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCC
Confidence 999999864 57899999999987 68889999999 5799886 148889999999999999999874211 01
Q ss_pred ---CCC-CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 776 ---LTS-PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 776 ---~~~-~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
+.. ++..+.++++.|++|.|+. .|.++|++++++++.+.+.... . ....+.+. .
T Consensus 211 ~~~~~~~~~~~~~~i~~~S~SK~~g~----~GlRiG~~~~~~~~~~~l~~~~-~-----------~~~~~~~~------~ 268 (387)
T PRK08912 211 HIPLMTLPGMRERTVKIGSAGKIFSL----TGWKVGFVCAAPPLLRVLAKAH-Q-----------FLTFTTPP------N 268 (387)
T ss_pred CcChhhCCCccCceEEEeechhhccC----cCceeEEEecCHHHHHHHHHHH-h-----------hccccCCh------H
Confidence 100 1112346888999998854 3678999999877665432100 0 00001110 0
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-H
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e 929 (985)
...++...+.. ..+-+.+..++..++.+++.+.|++ ++.+. .+.+.++ +.++++.. ....+..++++.|. +
T Consensus 269 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~~~--l~~~l~~~--~~~~~~~~~~~~l~~~ 341 (387)
T PRK08912 269 LQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRIGFPVL--PSQGTYF--LTVDLAPL--GLAEDDVAFCRRLVEE 341 (387)
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEeccccc--CCCCCHHHHHHHHHhc
Confidence 11111122211 1222344455667777888888887 44332 2222222 23344310 01246778898875 5
Q ss_pred CCCccCCC-CC----CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 930 YGFHGPTM-SW----PVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 930 ~Gi~~~~~-~~----pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
+||.+... .| +..+++|++++. .+++++ ..++.|++.+
T Consensus 342 ~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~---~~l~rl~~~l 384 (387)
T PRK08912 342 AGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLD---EAVERLAAAR 384 (387)
T ss_pred CCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHH---HHHHHHHHHH
Confidence 79986432 12 235789999984 466676 6666666544
No 280
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.67 E-value=1.2e-15 Score=174.75 Aligned_cols=290 Identities=18% Similarity=0.193 Sum_probs=184.0
Q ss_pred HHHHHHHHHHhC------CCcc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEE
Q 001990 635 NNLGEWLCTITG------FDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (985)
Q Consensus 635 ~el~~~la~l~G------~~~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v 707 (985)
.++++.++++++ .+.. .++.++|++.....+..+. . ..+++.|+++++.|..+...++..|++++.+
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~---~---~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~ 120 (363)
T PF00155_consen 47 PELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLL---K---INPGDTVLVPDPCYPSYIEAARLLGAEVIPV 120 (363)
T ss_dssp HHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHH---H---SSTTSEEEEEESSSTHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcc---c---ccccccceecCCccccccccccccCceeeec
Confidence 356666666666 4555 6777777764322222221 0 1367889999998888888889999999999
Q ss_pred eCC--CCCCCCHHHHHHHHHhcC-C--CeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccccCCCC-
Q 001990 708 GTD--AKGNINIEELRKAAEANR-D--NLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTS- 778 (985)
Q Consensus 708 ~~~--~~g~iDle~L~~~i~~~~-~--~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~g~~~- 778 (985)
|.+ .++.+|+++|++.+++.. + ++.+|++++| |++|..- +++++|+++|+++|+++++|.++.....+-..
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 200 (363)
T PF00155_consen 121 PLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDF 200 (363)
T ss_dssp EEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHT
T ss_pred cccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCcc
Confidence 964 567899999999998431 1 5688999999 5799875 24677777799999999999998532222000
Q ss_pred ----C-CcCCCc-EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 779 ----P-GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 779 ----~-g~~g~D-i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
. ...+.+ +++.|++|.|+.| |.++|++++++++.+.+..... .. ..++ ..
T Consensus 201 ~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~~~~------------~~--~~~~------~~ 256 (363)
T PF00155_consen 201 GPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRRFQR------------SG--LSSS------PM 256 (363)
T ss_dssp HHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHHHHH------------HT--TSSH------HH
T ss_pred Ccccccccccccceeeeecccccccc----ccccccccchhhhhhhhhhccc------------cc--cccc------hh
Confidence 0 012234 7788888887543 6789999998776655431100 00 0111 11
Q ss_pred HHHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH
Q 001990 853 LPISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (985)
Q Consensus 853 ~~~A~a~l~~lg~--~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e 929 (985)
...+...+..-+. +-+.+..++..++.+++.+.|++ ++.+. .++ ...+ +.+..+ ..+..++.+.|.+
T Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~-~~~~--~~~~~~------~~~~~~l~~~L~~ 326 (363)
T PF00155_consen 257 QAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVL-PPE-AGFF--LWVRLD------PNDAEELAQELLE 326 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEE-HHS-BSSE--EEEEES------HHHHHHHHHHHHH
T ss_pred hHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhhee-ecc-CccE--EEEEcc------cchHHHHHHHHHH
Confidence 1111122222221 13455666677888999999977 44432 221 2222 233333 1145789999998
Q ss_pred C-CCccCCCC-CCCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 930 Y-GFHGPTMS-WPVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 930 ~-Gi~~~~~~-~pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
+ ||.+.... +.+++.+|+++ ...++++++ +++++|
T Consensus 327 ~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~---~~~~~l 363 (363)
T PF00155_consen 327 EYGILVRPGSYFGVPGYIRISL-ASHSEEDLE---EALERL 363 (363)
T ss_dssp HHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHH---HHHHHH
T ss_pred hCCEEEEecCCCCCCCEEEEEe-ccCCHHHHH---HHHhhC
Confidence 8 99874322 22478999999 789999999 888765
No 281
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=4.8e-15 Score=172.44 Aligned_cols=142 Identities=24% Similarity=0.260 Sum_probs=118.5
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l 291 (985)
.+++.+|++.|.+. +.++.+|++++.++++++ +. +||+||+++..|+.+...+...++..|++++++|. +++
T Consensus 68 ~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~l-l~--~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l 142 (431)
T PRK08248 68 VFEKRIAALEGGIG--ALAVSSGQAAITYSILNI-AS--AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENF 142 (431)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHH
Confidence 47789999999765 778999999988887765 33 89999999999998888887777789999999976 455
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cccccc
Q 001990 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVP 362 (985)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P 362 (985)
++ +++++++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|+ |++++|
T Consensus 143 ~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD-~t~a~~~~~~pl~~gaDivv~S~tK~lgg~ 215 (431)
T PRK08248 143 EAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVD-NTFASPYLLRPIEHGADIVVHSATKFIGGH 215 (431)
T ss_pred HHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEe-CCCCccccCChhHcCCCEEEEcCccccCCC
Confidence 55 7788999999987 78999999999999999999999995 34555556667789999999998 776543
No 282
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.67 E-value=2.4e-15 Score=155.64 Aligned_cols=290 Identities=17% Similarity=0.240 Sum_probs=182.9
Q ss_pred hcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v 707 (985)
.|++..+.+++..+|++.+-++..+++ ++-.++.+++.+++ ++.+-|+..+.-|.+.. .|+++
T Consensus 108 cGtq~iHk~LE~kiAqfh~rED~ilyp-scfdANag~feail--------~pedAvfSDeLNhASII-----dGirL--- 170 (417)
T KOG1359|consen 108 CGTQDIHKLLESKIAQFHGREDTILYP-SCFDANAGAFEAIL--------TPEDAVFSDELNHASII-----DGIRL--- 170 (417)
T ss_pred ecchHHHHHHHHHHHHHhCCCceEEec-cccccchHHHHHhc--------Chhhhhhccccccchhh-----hhhHH---
Confidence 577778999999999999988865554 44445544444443 45665555544443332 23322
Q ss_pred eCCCCCCCCHHHHHHHHHhc-CCCeEEEEEEcC--CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCC---c
Q 001990 708 GTDAKGNINIEELRKAAEAN-RDNLSTLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---Y 781 (985)
Q Consensus 708 ~~~~~g~iDle~L~~~i~~~-~~~t~~Vvi~~p--n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g---~ 781 (985)
+...+.+|+-+++..+.+. +-+.+ ++++-. +..|-+. |+++|++++++||+++++|++|+.+..|..--| .
T Consensus 171 -ckry~h~dv~~l~~~l~~a~k~r~k-lv~TDg~FSMDGdia-Pl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~ 247 (417)
T KOG1359|consen 171 -CKRYRHVDVFDLEHCLISACKMRLK-LVVTDGVFSMDGDIA-PLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEE 247 (417)
T ss_pred -HhhhccchhHHHHHHHHHhhhheEE-EEEecceeccCCCcc-cHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHH
Confidence 1134678899998776532 23444 444443 5688887 899999999999999999999976654432111 1
Q ss_pred ----CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHH
Q 001990 782 ----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 782 ----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
-.+|++..++.|.+ ||-.+||..+++.++..+..+ .|.+-.+|.- +.....++++++
T Consensus 248 ~~vm~~vdiinsTLgKAl------Gga~GGyttgp~~li~llrqr-----------~RpylFSnsl--ppavV~~a~ka~ 308 (417)
T KOG1359|consen 248 FGVMGDVDIINSTLGKAL------GGASGGYTTGPKPLISLLRQR-----------SRPYLFSNSL--PPAVVGMAAKAY 308 (417)
T ss_pred hCCCCcceehhhhhhhhh------cCCCCCCccCChhHHHHHHhc-----------CCceeecCCC--ChhhhhhhHHHH
Confidence 23799988888887 456678999998877665422 1222222221 111222233333
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 858 a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
.. .+... ....+...+.+++++..+. |+.+. +...|.- .+++.- ...+..+++.|+++||++-.
T Consensus 309 dl--lm~s~---~~i~~~~a~~qrfr~~me~aGftIs--g~~hPI~-pv~lGd-------a~lA~~~ad~lLk~Gi~Vig 373 (417)
T KOG1359|consen 309 DL--LMVSS---KEIQSRQANTQRFREFMEAAGFTIS--GASHPIC-PVMLGD-------ARLASKMADELLKRGIYVIG 373 (417)
T ss_pred HH--HHhhH---HHHHHHHHHHHHHHHHHHhcCceec--CCCCCcc-ceeccc-------HHHHHHHHHHHHhcCceEEe
Confidence 32 22222 2334455677888888876 77764 3212322 122211 12456789999999999877
Q ss_pred CCCCC-C---CEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 937 MSWPV-P---GTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 937 ~~~pv-~---~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+++|+ | ..||+.++..||+|||| ++++++.++.+.
T Consensus 374 fs~PvVP~gkariRVqiSAaHt~edid---~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 374 FSYPVVPKGKARIRVQISAAHTEEDID---RLIEAFSEVGRF 412 (417)
T ss_pred ecCCcCCCCceEEEEEEehhcCHHHHH---HHHHHHHHHHHh
Confidence 77773 3 46999999999999999 999999987654
No 283
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=2.1e-14 Score=167.88 Aligned_cols=301 Identities=19% Similarity=0.119 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|+++++.. ...++.+||+++++++++.+|.| +++.+|+. ...+||.........|.
T Consensus 86 ~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 159 (443)
T PRK08360 86 PLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAY------TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVG 159 (443)
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHh------cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCC
Confidence 457888899988643 23578899999999999988876 34566765 55789987555443231
Q ss_pred ---EEEEEeCCCCCC------------CCHHHHHHHHHh--cCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCC
Q 001990 703 ---KIVSVGTDAKGN------------INIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 761 (985)
Q Consensus 703 ---~v~~v~~~~~g~------------iDle~L~~~i~~--~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~ 761 (985)
.+..+|...... .+++.+++++++ +.+++++|+++-- +.+|.+.+ .+++|.++|++||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (443)
T PRK08360 160 ELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGI 239 (443)
T ss_pred CCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 234444422110 235567777753 2367888888632 56787652 28999999999999
Q ss_pred EEEEEccccccccCCCC---CC--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCC
Q 001990 762 QVYMDGANMNAQVGLTS---PG--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKS 836 (985)
Q Consensus 762 lliVD~a~~~~~~g~~~---~g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~ 836 (985)
++++|+++. +++-... .. ....|++++ .|.++ +|..+|++++++++.+.+.....
T Consensus 240 llI~DEv~~-g~gr~G~~~a~~~~~~~pDiitl--sK~l~-----~G~pigav~~~~~i~~~~~~~~~------------ 299 (443)
T PRK08360 240 LLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITL--GKPLG-----GGLPISATIGRAEIMDSLPPLAH------------ 299 (443)
T ss_pred EEEEecccc-CCCcCccchhhhhcCCCCCEEEe--ccccc-----CCceeEEEEEcHHHHhhhcCCCC------------
Confidence 999999874 2211110 01 123688765 47774 34568888888877765532100
Q ss_pred CCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeEcCCCCceeEEEEEEecCcc
Q 001990 837 QPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLK 913 (985)
Q Consensus 837 ~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~~~g~~~~~~~~~vv~~~~~~ 913 (985)
+.. ..+++..++++.+.|..+..+++ .++...+.++|++.|++. ++++..-.....+ +-+.+..-.
T Consensus 300 --~~T----~~~~p~~~aaa~a~l~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~--~gie~~~~~ 368 (443)
T PRK08360 300 --AFT----LSGNPVASAAALAVIEEIEEKNL---LKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLM--IGVDLVKDR 368 (443)
T ss_pred --CCC----CCcCHHHHHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceE--EEEEEecCC
Confidence 011 12344556667777777765544 346667778888887652 3322111111111 222221000
Q ss_pred ccCC---CCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 914 NTAG---IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 914 ~~~g---~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.... .....+...|.++|+.+.... .+.+|++|+..+|++||| +++++|.++++++.+
T Consensus 369 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lr~~P~l~~t~~~id---~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 369 ETKERAYEEAAKVVWRAWELGLIVTFFS---GNVLRIQPPLTIEKEVLD---EGLDILEEAIEDVEE 429 (443)
T ss_pred cccCccHHHHHHHHHHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHH---HHHHHHHHHHHHHHh
Confidence 0000 123568888999999875332 478999999999999999 999999999987754
No 284
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.67 E-value=9.9e-15 Score=168.72 Aligned_cols=273 Identities=19% Similarity=0.191 Sum_probs=183.6
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|+++|++.+ ..+.+|++++.+++++. +. +||+||+++..|+++...++..++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 142 (398)
T PRK07504 68 DMFEKRMCALEGAEDA--RATASGMAAVTAAILCQ-VK--AGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDN 142 (398)
T ss_pred HHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHH-hC--CCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 4577899999999874 35778888776655543 23 88999999999999888877666778999998864 55
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |++|.+.|+++|.++||++|++++|| +.++.+....|.++|+|++++|. |+|+++ |.
T Consensus 143 l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD-~a~a~~~~~~~~~~gaDivv~S~sK~l~g~---g~ 218 (398)
T PRK07504 143 WEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD-NVFATPLFQKPLELGAHIVVYSATKHIDGQ---GR 218 (398)
T ss_pred HHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE-CCccccccCCchhhCCCEEEeeccccccCC---cc
Confidence 666 7889999999998 68999999999999999999999995 45566666677889999999998 887643 21
Q ss_pred CceEEEEEchhhHhc-CCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~~~~~~~-lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
.-.|++..+++.+.+ +. ...+..|. +.++. .|+ +...+.+-+..+
T Consensus 219 ~~GG~vv~~~~~i~~~~~-------------------------~~~~~~g~----~~s~~---~A~--~~l~~L~tl~~R 264 (398)
T PRK07504 219 CLGGVVLSDKAWIEEHLQ-------------------------DYFRHTGP----SLSPF---NAW--TLLKGLETLPVR 264 (398)
T ss_pred ceEEEEEeCcHHHHHHHH-------------------------HHHHHhCC----CCCHH---HHH--HHHhccchHHHH
Confidence 223677666654421 10 00011110 00121 222 234455667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-Ec-CC----CC-----------cceEEEecCC----HHHHHHHHHHcCc--eee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----PF-----------FDTVKVKCAD----AHAIASAAYKIEM--NLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~~-----------~~~~~i~~~~----~~~l~~~L~~~Gi--~~~--- 500 (985)
.++..+++.++++.|+++.+++ +. +. |. ..-|+|.+.+ +.++.+.|.=..+ .+.
T Consensus 265 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~ 344 (398)
T PRK07504 265 VRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAK 344 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCC
Confidence 7888899999999999875454 32 11 11 2247777754 3344444432111 110
Q ss_pred e----------------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 V----------------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 ~----------------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +.++.+|+|++.-+.++-|++|.++|..
T Consensus 345 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 395 (398)
T PRK07504 345 SLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKK 395 (398)
T ss_pred eeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0 1246799999988766666777777753
No 285
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.67 E-value=8.8e-15 Score=168.42 Aligned_cols=213 Identities=24% Similarity=0.270 Sum_probs=156.6
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch---
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~--- 289 (985)
..++++.+|+++|.+. +.++++|++++.++++++ .. +||+||++...|+.+...+..+++..|++++++|.+
T Consensus 56 ~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al-~~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~ 130 (380)
T TIGR01325 56 VAAFEERIAALEGAER--AVATATGMSAIQAALMTL-LQ--AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLN 130 (380)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHH
Confidence 4567789999999865 667899999998887765 23 789999999999888877776677789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ +++++++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+||++.|. |.++++ |
T Consensus 131 ~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD-~a~~~~~~~~pl~~g~Divv~S~sK~l~g~---g 206 (380)
T TIGR01325 131 AWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD-NVFATPVLQQPLKLGADVVVYSATKHIDGQ---G 206 (380)
T ss_pred HHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeeccceecCC---C
Confidence 4555 7788999999998 68999999999999999999999995 34454555566789999999998 877643 1
Q ss_pred CCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 367 GP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
-.-+|++..++++++.+-. .++..|.. .++.. + ++...+.+-++..
T Consensus 207 ~~~gG~vv~~~~~~~~l~~-------------------------~~~~~g~~----~~p~~---a--~~~l~~l~tl~~r 252 (380)
T TIGR01325 207 RVMGGVIAGSEELMAEVAV-------------------------YLRHTGPA----MSPFN---A--WVLLKGLETLSLR 252 (380)
T ss_pred CeEEEEEEeCHHHHHHHHH-------------------------HHHhhCCC----CCHHH---H--HHHHhccCcHHHH
Confidence 1124777777776554310 00111110 12221 1 2245566677778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
.++..+++.++.+.|+++++++
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 8888999999999999886454
No 286
>PRK06062 hypothetical protein; Provisional
Probab=99.67 E-value=1.9e-14 Score=168.75 Aligned_cols=297 Identities=15% Similarity=0.150 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|++++..+ ...++.+||+++++++++.+|.| ++|.+||. ...+||....++...|.
T Consensus 97 ~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 170 (451)
T PRK06062 97 RSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLH------TGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTG 170 (451)
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHh------hCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCC
Confidence 457888888887532 23477899999999999988876 24556765 66899988766543321
Q ss_pred --EEEEEeCCCCC------CCC-------HHHHHHHHHhc-CCCeEEEEEEcC-CCccccccC----HHHHHHHHHHcCC
Q 001990 703 --KIVSVGTDAKG------NIN-------IEELRKAAEAN-RDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGG 761 (985)
Q Consensus 703 --~v~~v~~~~~g------~iD-------le~L~~~i~~~-~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~g~ 761 (985)
.+..++..... ..| +++++++++.+ ++++++|+++.. ...|.+. + +++|.++|+++|+
T Consensus 171 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~-p~~~yl~~lr~lc~~~g~ 249 (451)
T PRK06062 171 RAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILV-PPPGYLAGVRELCDRHGI 249 (451)
T ss_pred CCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCccc-CCHHHHHHHHHHHHHcCC
Confidence 11222221111 123 67888888643 256788887643 4567776 4 9999999999999
Q ss_pred EEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCC
Q 001990 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (985)
Q Consensus 762 lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~ 832 (985)
++|+|+++. |+.+.|.+ .+|++++ .|.++ +|- | +|.+++++++.+.+....+
T Consensus 250 lLI~DEV~t----GfGRtG~~~a~~~~gv~PDi~t~--gK~lg----gG~~P-igav~~~~~i~~~~~~~~~-------- 310 (451)
T PRK06062 250 VLIADEVMA----GFGRTGKWFAIEHFGVVPDLITF--AKGVN----SGYVP-LGGVAISEAIAATFADRPY-------- 310 (451)
T ss_pred EEEeecccc----CCCcCcHHHHHHhcCCCCCeeee--chhhh----cCCcC-cEEEEEcHHHHHHhccCCC--------
Confidence 999999874 34344322 3788865 37663 331 4 4556667677655431100
Q ss_pred CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHH-HHHHHHHhcc---CCee--EcCCCCceeEEEE
Q 001990 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA-NYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (985)
Q Consensus 833 ~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a-~~l~~~L~~~---~~i~--~~g~~~~~~~~~v 906 (985)
. ..+++.|+++.++++.+.|..+..+++. ++..+.. ++|+++|++. ++++ ..|. +. +..+.
T Consensus 311 -----~---~~~T~~gnpl~~Aaa~a~L~~l~~~~l~---~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~gve 377 (451)
T PRK06062 311 -----P---GGLTYSGHPLACAAAVATINAMEEEGIV---ENAARIGAEVLGPGLRELAERHPSVGEVRGL-GV-FWALE 377 (451)
T ss_pred -----C---CCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhcCCcEEeEecc-cc-EEEEE
Confidence 0 0012345677778888888888666544 3444554 4777777652 2321 2221 11 21122
Q ss_pred EEecCccccCCC--------CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 907 VDLRGLKNTAGI--------EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 907 v~~~~~~~~~g~--------~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
+.-+.- ..... ....+.+.|.++|+++.. ..+.+|++|+..+|++||| +++++|.++++++..
T Consensus 378 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~----~~~~lrl~ppl~~t~~eid---~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 378 LVADRE-TREPLAPYGASSAAMAAVKAACKERGLLPFV----NGNRIHVVPPCTVTEDEVR---EGLAILDAALAVADA 448 (451)
T ss_pred Eccccc-ccCCCcccchhhHHHHHHHHHHHHCCcEEee----cCCEEEEECCccCCHHHHH---HHHHHHHHHHHHhhh
Confidence 211100 00000 134688889999998642 1478999999999999999 999999999887653
No 287
>PRK07777 aminotransferase; Validated
Probab=99.67 E-value=1.1e-14 Score=168.43 Aligned_cols=298 Identities=16% Similarity=0.111 Sum_probs=184.3
Q ss_pred hcHHHHHHHHHHHHHHHhCCCc--c--ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFDS--F--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~--~--~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|.+. . .+.+++|+++..+++.++ . .++++|+++.+.|..+...++..|.+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~---~-----~~gd~vli~~p~y~~~~~~~~~~g~~ 132 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGL---V-----EPGDEVLLIEPYYDSYAAVIAMAGAH 132 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh---c-----CCCCEEEEeCCCchhhHHHHHHCCCE
Confidence 5766666667777777778652 2 344555555553333322 1 36789999888777776677889999
Q ss_pred EEEEeCCCC---CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc--c-
Q 001990 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ--V- 774 (985)
Q Consensus 704 v~~v~~~~~---g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~--~- 774 (985)
++.++.+++ +.+|+++++++++ +++++|++++| |++|.+. .++++|.++|+++|+++++|+++.... .
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 209 (387)
T PRK07777 133 RVPVPLVPDGRGFALDLDALRAAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA 209 (387)
T ss_pred EEEeecCCccCCCcCCHHHHHHhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC
Confidence 999998654 4699999999886 67899999988 5789874 259999999999999999999874211 0
Q ss_pred ---CCCC-CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 775 ---GLTS-PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 775 ---g~~~-~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
.+.. ++..+.++++.|++|+|+.| |.++|++++++++...+.... ...+...++ + .+
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~~~~~~------------~~~~~~~~~-~-~q- 270 (387)
T PRK07777 210 RHLPLATLPGMRERTVTISSAAKTFNVT----GWKIGWACGPAPLIAAVRAAK------------QYLTYVGGA-P-FQ- 270 (387)
T ss_pred CcccHhhCCCCcCcEEEEeechhhccCc----CceeEEEecCHHHHHHHHHHH------------hhcccCCCC-H-HH-
Confidence 1111 11234578899999998643 667899998877654432100 000001111 0 01
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~- 928 (985)
.++..++. .+.+-+++..+...++.+++.+.|++ ++.+. .+++.++ +.+.++.. ...+..++++.|.
T Consensus 271 ---~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~--~~~~~~~~---~~~~~~~~~~~l~~ 339 (387)
T PRK07777 271 ---PAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAGFEVH--DSAGTYF--LCADPRPL---GYDDGTEFCRALPE 339 (387)
T ss_pred ---HHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--CCCcceE--EEeccccc---CCCCHHHHHHHHHH
Confidence 11112222 12333444555667788889998887 44432 2222221 22343210 1236788999996
Q ss_pred HCCCccCCCC-C-----CCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 929 DYGFHGPTMS-W-----PVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 929 e~Gi~~~~~~-~-----pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
++||.+.... | +..+.+|+++.. ++++++ +.++.|+++
T Consensus 340 ~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~---~~l~~l~~~ 383 (387)
T PRK07777 340 RVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLD---EAIRRLRAL 383 (387)
T ss_pred hCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHH---HHHHHHHHH
Confidence 5799874321 1 124689999863 677777 777766654
No 288
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=2.6e-14 Score=167.91 Aligned_cols=308 Identities=16% Similarity=0.157 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHhCCC------ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc----
Q 001990 634 FNNLGEWLCTITGFD------SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM---- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~------~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~---- 702 (985)
..++.+.|++++.-. ...++.+||+++++++++.+|.|...+|.+++.+||. ..++||....+....|.
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~ 188 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYR 188 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccc
Confidence 447778888887421 1347889999999999999998876555444567775 66899987655433221
Q ss_pred --------EEEEEeCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEEc-C-CCcccccc---CHHHHHHHHH
Q 001990 703 --------KIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIH 757 (985)
Q Consensus 703 --------~v~~v~~~~~-----g-------~iDle~L~~~i~~~~~~t~~Vvi~~-p-n~~G~i~~---di~eI~~la~ 757 (985)
.+..+|.... + ..+++.+++.++++.+++++|+++- . +..|.+.+ -++++.++|+
T Consensus 189 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~ 268 (472)
T PRK08742 189 RVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCD 268 (472)
T ss_pred cccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHH
Confidence 1233443211 1 1136778888875557888888874 2 34566542 3899999999
Q ss_pred HcCCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCC
Q 001990 758 DNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTG 828 (985)
Q Consensus 758 ~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~ 828 (985)
++|+++|+|+++ .|+.+.|.+ -+|++++ .|.++ +|- | +|.+++++++.+.+......
T Consensus 269 ~~gillI~DEV~----TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~----gG~~P-laav~~~~ei~~~~~~~~~~--- 334 (472)
T PRK08742 269 AHGAFLIADEIA----TGFGRTGTLFACEQAGVMPDLLCL--SKGLT----GGFLP-LSAVLATQQLYDAFLDDSRE--- 334 (472)
T ss_pred HcCCEEEEechh----hCCCCCccchHHHhcCCCCCEEEE--ccccc----CCCCC-cceeeccHHHHHHhhccCcc---
Confidence 999999999886 344444432 3799877 37763 331 4 66677787765543210000
Q ss_pred CCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCee--EcCCCCceeEE
Q 001990 829 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPIL--FRGVNGTVAHE 904 (985)
Q Consensus 829 ~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~--~~g~~~~~~~~ 904 (985)
+.....+++.|+++.++++.+.|..+.++++.+ +..+..++|.+.++. .+.++ +.|. + .+..
T Consensus 335 ---------~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~---~~~~~g~~l~~~~~~~~~~~~i~dvRG~-G-l~~g 400 (472)
T PRK08742 335 ---------RAFLHSHSYTGNPLACAAALATLDIFADDDVIA---RNQPTAARMTQLAAQIGEHPHVADVRQA-G-MVVA 400 (472)
T ss_pred ---------CccCcCCCCCccHHHHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHHHhcCCCeeeEecc-c-eEEE
Confidence 000011234467777888888898887776543 344455566654443 12221 1121 1 1211
Q ss_pred EEEEecCccccC-CCC---HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 905 FIVDLRGLKNTA-GIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 905 ~vv~~~~~~~~~-g~~---~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+.+..+.-.... ..+ ...+.+.+.++|+.+... .+.||+.|....|++||| .++++|++.++++.
T Consensus 401 iel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----g~vi~~~PpL~it~~ei~---~~~~~l~~~l~~~~ 469 (472)
T PRK08742 401 FELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----GDVLYWMPPYCVDEAQLA---LLADTTRHAIDEAV 469 (472)
T ss_pred EEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----CCEEEEECCCCCCHHHHH---HHHHHHHHHHHHHh
Confidence 222111000000 001 245778888999987432 478999999999999999 99999999987653
No 289
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=1.8e-14 Score=169.28 Aligned_cols=310 Identities=13% Similarity=0.146 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|++++... ...++.+||+++++++++.+|.|...+|.+++.+||. ..++||....+....|-
T Consensus 101 ~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 180 (460)
T PRK06916 101 SILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSS 180 (460)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCC
Confidence 457888888887532 2357889999999999999998866555445667775 66789977555433221
Q ss_pred ---EEEEEeCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEEc-C-CCcccccc---CHHHHHHHHHHcCCE
Q 001990 703 ---KIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQ 762 (985)
Q Consensus 703 ---~v~~v~~~~~-----g-------~iDle~L~~~i~~~~~~t~~Vvi~~-p-n~~G~i~~---di~eI~~la~~~g~l 762 (985)
.+..+|.... + ..|++++++.++++.+++++|+++- . ...|++.+ -++++.++|+++|++
T Consensus 181 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~l 260 (460)
T PRK06916 181 LLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVL 260 (460)
T ss_pred CCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1233433210 0 1246778888876667899999875 3 34566642 389999999999999
Q ss_pred EEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCC
Q 001990 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (985)
Q Consensus 763 liVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~ 834 (985)
+|+|+++ .|+.+.|.+ .+|++++ .|.+ ++|-..+|.+.+++++.+.+....-. .
T Consensus 261 lI~DEV~----TG~GRtG~~~a~~~~gv~PDiv~~--gK~l----~gG~~Pi~av~~~~ei~~~~~~~~~~--~------ 322 (460)
T PRK06916 261 FITDEVA----TGFGRTGKMFACEHENVTPDIMTA--GKGL----TGGYLPIAITVTTDEIYNAFYGDYEE--Q------ 322 (460)
T ss_pred EEeechh----hCCCcCchhhHHHhcCCCCCeeee--ehhh----hcCccccceeeecHHHHHHhhccccc--c------
Confidence 9999986 334444432 3798875 3766 33322367777787766543211000 0
Q ss_pred CCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEec
Q 001990 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR 910 (985)
Q Consensus 835 ~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~~ 910 (985)
.. ....+++.|+++.++++.+.|..+.++++. ++..++.++|++.|++. ...+ +.|. + .+..+-+.-+
T Consensus 323 --~~-~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-G-lm~giel~~~ 394 (460)
T PRK06916 323 --KT-FFHGHSYTGNPLGCAVALANLELYEKTNLI---EQVARKTEYVATQLEDLFALKHVGDIRQL-G-LMVGIELVKN 394 (460)
T ss_pred --Cc-cccCCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhcCCCeEEeecC-C-ceeeEEeecc
Confidence 00 000112345667777788888888766544 46667778888888762 2211 2221 1 1211212111
Q ss_pred C-ccccCCC--C-HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 911 G-LKNTAGI--E-PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 911 ~-~~~~~g~--~-~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
. .+..... . ...+.+.|.++|+++... .+.+|+.|+..+|++||| .++++|.++++++.
T Consensus 395 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~l~~~Ppl~it~~~id---~~~~~l~~~l~~~~ 457 (460)
T PRK06916 395 KETKEPFEWTERVGVQVCKRSRELGMLTRPL----GNTIVFMPPLASTIDELD---EMLRILYKAISDVT 457 (460)
T ss_pred cccccCCCchhhHHHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHHHHH---HHHHHHHHHHHhhc
Confidence 0 0000000 1 246788889999997432 378999999999999999 99999999887643
No 290
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=7.4e-15 Score=167.72 Aligned_cols=210 Identities=14% Similarity=0.124 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
...+++.+++|-|.+.+ +.+.||..|+.++++++. +++|+||+++..|+..... ++..|+++.+++.
T Consensus 64 ~~~le~~la~LEg~~~a-~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCELEGGAGC-ALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHHhCCCeE-EEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 55788999999998765 445567766644444332 4678999988767654433 3567999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcC--CEEEEEccccccccCCCCCCcCCCcE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSPGYIGADV 786 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g--~lliVD~a~~~~~~g~~~~g~~g~Di 786 (985)
.|.++++++|+ ++|++|+++.| |++|.+. ||++|+++||++| ++++||++++.+. +.+|.++|+|+
T Consensus 135 -----~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~-DI~~Ia~ia~~~g~g~~lvVDnT~a~p~--~~~pl~~GaDi 203 (395)
T PRK08114 135 -----LIGADIAKLIQ---PNTKVVFLESPGSITMEVH-DVPAIVAAVRSVNPDAVIMIDNTWAAGV--LFKALDFGIDI 203 (395)
T ss_pred -----CCHHHHHHhcC---CCceEEEEECCCCCCCEee-cHHHHHHHHHHhCCCCEEEEECCCcccc--ccCHHHcCCcE
Confidence 37899999997 78999999998 6799998 9999999999985 9999999986543 36788999999
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++.|+||+++.+ +--++|+++.++++...+... ...++...+ ...|| +...|-+
T Consensus 204 vv~S~tKyl~Gh---sdv~~G~v~~~~~~~~~l~~~-------------~~~~G~~~~--------p~~a~--l~~rgl~ 257 (395)
T PRK08114 204 SIQAGTKYLVGH---SDAMIGTAVANARCWEQLREN-------------SYLMGQMVD--------ADTAY--MTSRGLR 257 (395)
T ss_pred EEEcCcccccCC---CcceeEEEEcCHHHHHHHHHH-------------HHhccCCCC--------HHHHH--HHHcCCC
Confidence 999999999532 112677777766543322100 001111111 12234 4455556
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 001990 867 GLTEASKIAILNANYMAKRLEKH 889 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~~ 889 (985)
.+.-++++..+++..+++.|++.
T Consensus 258 TL~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 258 TLGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC
Confidence 67777888999999999999974
No 291
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=7.6e-15 Score=169.16 Aligned_cols=276 Identities=13% Similarity=0.083 Sum_probs=176.5
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhh--------------------------cC--CCCEEEEcCCCC-
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ--------------------------KG--KKKTFIIASNCH- 265 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~--------------------------~~--~g~~Vlv~~~~h- 265 (985)
.+.+...+|+|++.+|+-.++|. .+..++.+|+.-. |+ .||+|+.-+..|
T Consensus 99 l~~~ra~~lf~a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~G 177 (493)
T PRK13580 99 EAAEHAKELFGAEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSG 177 (493)
T ss_pred HHHHHHHHHhCCCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCC
Confidence 34577889999999888766554 4455555554310 00 178888554333
Q ss_pred -------hhHHHHHHHhhcCCCeEE--EEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEecc
Q 001990 266 -------PQTIDICITRADGFDIKV--VVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDL 335 (985)
Q Consensus 266 -------~s~~~~~~~~a~~~gi~v--~~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~ 335 (985)
+.+.......+..+|+.- -.+|++++++ +.++++.|++.+.+.+|.+.|+++|.++|+++|++++|| ..
T Consensus 178 GHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD-~A 256 (493)
T PRK13580 178 GHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVD-MA 256 (493)
T ss_pred CeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEE-Cc
Confidence 222222111122334432 1245677777 777888888877544466789999999999999999994 34
Q ss_pred ccccCCC--------CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccc
Q 001990 336 LALTILK--------PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (985)
Q Consensus 336 ~alg~l~--------~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~t 406 (985)
++.|++. .| ..++||+++++ |+|++ |..||+++++++.+++. . ..+ |.
T Consensus 257 H~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL~G------P~GG~I~~~~~l~~~L~--------~--a~P-~i----- 313 (493)
T PRK13580 257 HFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTLRG------PRGGLVLAKKEYADAVD--------K--GCP-LV----- 313 (493)
T ss_pred hhhceeccccchhhcCC-CCCCcEEEeCChhhccC------CCeEEEEecHHHHHHHh--------h--CCC-cc-----
Confidence 5666543 12 23799999998 87854 44589999998877661 0 001 10
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcceEEEecCC-
Q 001990 407 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD- 484 (985)
Q Consensus 407 re~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~~- 484 (985)
.+++.. ....+...++ ..+...+.++.+++..+++++|++.|.+.| ++++. ....+.+.+.+.+
T Consensus 314 --------~gg~l~---p~iAA~avAl--~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~~ 379 (493)
T PRK13580 314 --------LGGPLP---HVMAAKAVAL--AEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTSF 379 (493)
T ss_pred --------cCCCcc---HHHHHHHHHH--HHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCCH
Confidence 011111 2222222222 222233457789999999999999999998 88863 2334556666553
Q ss_pred ---HHHHHHHHHHcCceeeee----------cCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 001990 485 ---AHAIASAAYKIEMNLRVV----------DSNTVTASFDET----TTLEDVDKLFIVFAG 529 (985)
Q Consensus 485 ---~~~l~~~L~~~Gi~~~~~----------~~~~lris~~~~----~t~edid~ll~~l~~ 529 (985)
...+.+.|.+.||.+... ....||+++++. ++++|++++++.|..
T Consensus 380 ~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~ 441 (493)
T PRK13580 380 GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVK 441 (493)
T ss_pred HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHH
Confidence 346778999999987532 146799999994 469999999999974
No 292
>PRK05968 hypothetical protein; Provisional
Probab=99.67 E-value=5.4e-15 Score=170.47 Aligned_cols=275 Identities=13% Similarity=0.118 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.+ +.+++|+.++..++.++. .++++||++...|+... ..+...|+++++++.
T Consensus 65 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDA-RGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 66899999999999875 445677766644443321 46789999887666432 234568999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |++++++++ +++++|++++|+ ..+.+. |+++|+++||++|+++++|+++..+. ...|..+|+|+++
T Consensus 136 ~-----d~~~l~~~i----~~tklV~ie~pt~~~~~~~-dl~~i~~la~~~gi~vivD~a~a~~~--~~~p~~~g~Divv 203 (389)
T PRK05968 136 R-----DEEAVAKAL----PGAKLLYLESPTSWVFELQ-DVAALAALAKRHGVVTMIDNSWASPV--FQRPITLGVDLVI 203 (389)
T ss_pred C-----CHHHHHHhc----ccCCEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcchh--ccCchhcCCcEEE
Confidence 3 899999887 367899999984 677776 89999999999999999999885432 2345567999999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|++|+|+.| |++++|+++.++++++.+....... .+ ..+. + ..||..+ .+-+.+
T Consensus 204 ~S~tK~l~g~---~~~~gG~i~~~~~~~~~l~~~~~~~----------~g-~~~~------~---~~A~~~l--~~L~tl 258 (389)
T PRK05968 204 HSASKYLGGH---SDTVAGVVAGSKEHIARINAEAYPY----------LG-AKLS------P---FEAWLLL--RGLRTL 258 (389)
T ss_pred eeccccccCC---CCeEEEEEEECHHHHHHHHHHHHHh----------CC-CCCC------h---HHHHHHH--cccCcH
Confidence 9999999532 3345788888876554332100000 00 0111 1 1123322 333456
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--CCee-EcCCCC-------ceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC--C
Q 001990 869 TEASKIAILNANYMAKRLEKH--YPIL-FRGVNG-------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP--T 936 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~~--~~i~-~~g~~~-------~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~--~ 936 (985)
..+.++..+++.++.+.|++. +..+ +++-.+ .....+.|+++ .+.+..++.+.|...++.++ .
T Consensus 259 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-----~~~~~~~f~~~L~~~~~~~s~G~ 333 (389)
T PRK05968 259 PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR-----EGIDVRAFADALKLFRLGVSWGG 333 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC-----CHHHHHHHHHhCCccEEecCCCC
Confidence 667777788899999999873 3222 232110 11123444543 13456778888866554321 1
Q ss_pred ----CC---------C-C-------C-CCEEEEeccCCCCHHhhc
Q 001990 937 ----MS---------W-P-------V-PGTLMIEPTESESKVCHN 959 (985)
Q Consensus 937 ----~~---------~-p-------v-~~~lris~t~~~t~eeId 959 (985)
+. . + + ++.+|+|++..++++=++
T Consensus 334 ~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~ 378 (389)
T PRK05968 334 HESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWA 378 (389)
T ss_pred CCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHH
Confidence 00 0 0 1 468999998766544333
No 293
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=2.1e-14 Score=168.72 Aligned_cols=308 Identities=14% Similarity=0.131 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 633 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
...++.+.|++++... ...++.+||+++++++++.+|.|...+|.+++.+||. ..++||....+....|.
T Consensus 91 ~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~ 170 (466)
T PRK07030 91 PVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYK 170 (466)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCC
Confidence 3457888888887422 2347789999999999999998866566445566764 66889977655433221
Q ss_pred ----EEEEEeCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEEc-C-CCcccccc---CHHHHHHHHHHcCC
Q 001990 703 ----KIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGG 761 (985)
Q Consensus 703 ----~v~~v~~~~~-----g-------~iDle~L~~~i~~~~~~t~~Vvi~~-p-n~~G~i~~---di~eI~~la~~~g~ 761 (985)
.+..+|.... + ..+++++++.++++.+++++|+++- . ...|++.+ -+++|.++|+++|+
T Consensus 171 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~ 250 (466)
T PRK07030 171 PLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250 (466)
T ss_pred ccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 1233443211 1 1236778888876667899998875 2 34566642 38999999999999
Q ss_pred EEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCC
Q 001990 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 833 (985)
Q Consensus 762 lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~ 833 (985)
++|+|+++ .|+.+.|.+ -+|++++ .|.++ +|--.+|.+++++++.+.+.... .
T Consensus 251 llI~DEV~----TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~ei~~~~~~~~-~-------- 311 (466)
T PRK07030 251 HLIHDEIA----VGFGRTGTMFACEQAGIRPDFLCL--SKALT----GGYLPLAAVLTTDTVYQAFYDDY-P-------- 311 (466)
T ss_pred EEEEeehh----hCcCccccchHHHhcCCCCCEEee--ehhcc----CCcccceEEEecHHHHHHHhccc-c--------
Confidence 99999876 344444432 3799877 37763 33113677778877765432100 0
Q ss_pred CCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEe
Q 001990 834 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDL 909 (985)
Q Consensus 834 ~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~ 909 (985)
. .+.....+++.|+++.++++.+.|..+.++++. ++..+..++|++.|++. ...+ ..|. +. + +.+.+
T Consensus 312 -~-~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~---~~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl-~--~gie~ 382 (466)
T PRK07030 312 -T-LRAFLHSHSYTGNPLACAAALATLDIFEQDNVI---ENNRALARRMAEATAHLADHPHVAEVRQT-GM-I--LAIEM 382 (466)
T ss_pred -c-ccccccCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHhcCCCEEEeEec-ee-E--EEEEe
Confidence 0 000001123445777788888888888776554 45667778888888652 2211 1121 11 1 22222
Q ss_pred cCcccc-CC--C---CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 910 RGLKNT-AG--I---EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 910 ~~~~~~-~g--~---~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
..-+.. .. . ....+.+.+.++|+++... .+.+|+.|+..+|++||| .++++|.+.++++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~i~~~Ppl~it~~eid---~~~~~l~~al~~~ 447 (466)
T PRK07030 383 VQDKASKTPYPWQERRGLKVYQHALERGALLRPL----GSVVYFLPPYVITPEQID---FLAEVASEGIDIA 447 (466)
T ss_pred ccCccccccCcchhHHHHHHHHHHHHCCeEEEec----CCEEEEECCccCCHHHHH---HHHHHHHHHHHHH
Confidence 100000 00 0 1246788889999987432 368999999999999999 9999999999887
No 294
>PLN02509 cystathionine beta-lyase
Probab=99.67 E-value=8.5e-15 Score=170.61 Aligned_cols=273 Identities=16% Similarity=0.165 Sum_probs=181.8
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|++.|.+. +.++.+|++++.+++ ++ .. +||+||+++..|+.+...++......|+++++++. +
T Consensus 135 ~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~l-l~--~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e 208 (464)
T PLN02509 135 RDALESLLAKLDKADR--AFCFTSGMAALSAVT-HL-IK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLD 208 (464)
T ss_pred HHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HH-hC--CCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHH
Confidence 4557789999998765 567788887765443 32 23 89999999999999988776656678999998865 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+.+..|.++|+|++++|+ |++++| |
T Consensus 209 ~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD-~A~a~~~~~~pl~~gaDivv~S~tK~l~G~---g 284 (464)
T PLN02509 209 EVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVD-NSIMSPVLSRPLELGADIVMHSATKFIAGH---S 284 (464)
T ss_pred HHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCccccccCChhhcCCcEEEecCcccccCC---C
Confidence 5655 7889999999998 78999999999999999999999994 45666766677789999999998 888654 2
Q ss_pred CCceEEEEEchhh-HhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~~~~~-~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
+...|+++++++. .+.+- ..++..++. + .+. .| |+...+-+-+..
T Consensus 285 dv~gG~v~~~~~~l~~~~~-------------------------~~~~~~g~~-l---~p~---~A--~l~lr~L~tL~~ 330 (464)
T PLN02509 285 DVMAGVLAVKGEKLAKEVY-------------------------FLQNSEGSG-L---APF---DC--WLCLRGIKTMAL 330 (464)
T ss_pred ccceeEEEeccHHHHHHHH-------------------------HHHHhcCCC-c---CHH---HH--HHHHhhhhhHHH
Confidence 3346888876542 22110 000111110 0 111 11 223444455666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC---HHHHHHHHHHc--Cceee---
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD---AHAIASAAYKI--EMNLR--- 500 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~---~~~l~~~L~~~--Gi~~~--- 500 (985)
+.++..++|.++++.|+++..++ |. +. | +..-|+|...+ +..+.+.|.=. +..+.
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~a~slG~~~ 410 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVK 410 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcceEcccCCCCC
Confidence 77788899999999999875453 32 11 1 11246666643 33444444311 11110
Q ss_pred ------e----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 ------V----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 ------~----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +.++.||+|++.-+.++=|++|.++|..
T Consensus 411 SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 411 SLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 0 1246789999887766666777777754
No 295
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.67 E-value=1.5e-14 Score=168.95 Aligned_cols=323 Identities=15% Similarity=0.156 Sum_probs=194.0
Q ss_pred ccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHH
Q 001990 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (985)
Q Consensus 592 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~ 671 (985)
..+|+|.+.+......+...-..+...++ ...++.++|++++......++.+||+++++++++.+|.|
T Consensus 65 ~~lGh~~p~v~~ai~~q~~~~~~~~~~~~------------~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~ 132 (428)
T PRK12389 65 IITGHAHPHITKAITEAAENGVLYGTPTE------------LEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAY 132 (428)
T ss_pred cccCCCCHHHHHHHHHHHHhCCccCCCCH------------HHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHh
Confidence 45788877665544433211111111111 234677888887742223477899999999999988876
Q ss_pred HHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc-------------------EEEEEeCCCCCCCCHHHHHHHHHhcCCCe
Q 001990 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------------------KIVSVGTDAKGNINIEELRKAAEANRDNL 731 (985)
Q Consensus 672 ~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------------------~v~~v~~~~~g~iDle~L~~~i~~~~~~t 731 (985)
+++.+||. ...+||.....+...|- ++..+|. .|++++++.++++++++
T Consensus 133 ------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 133 ------TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWGDEV 201 (428)
T ss_pred ------hCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcCCcE
Confidence 24566664 66899977655443221 1222222 38999999998666778
Q ss_pred EEEEEEcC-CCccccccC----HHHHHHHHHHcCCEEEEEccccccc-cCCC-CCCc--CCCcEEEeCCcccccccCCCC
Q 001990 732 STLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SPGY--IGADVCHLNLHKTFCIPHGGG 802 (985)
Q Consensus 732 ~~Vvi~~p-n~~G~i~~d----i~eI~~la~~~g~lliVD~a~~~~~-~g~~-~~g~--~g~Di~~~s~hKtl~~p~g~G 802 (985)
++|+++.. +..|.+. + +++|.++|+++|+++|+|+++. ++ .++. .... ..+|++++ .|.+ ++|
T Consensus 202 aavi~EPv~g~~G~~~-p~~~yl~~l~~lc~~~g~llI~DEV~t-G~Rt~~~~a~~~~gv~PDivt~--gK~l----ggG 273 (428)
T PRK12389 202 AAVLVEPIVGNFGIVE-PKPGFLEAVNELAHEAGALVIYDEVIT-AFRFMYGGAQDLLGVEPDLTAL--GKII----GGG 273 (428)
T ss_pred EEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCcchhhHHhCCCCCeeee--chhh----cCC
Confidence 88887643 4567776 4 9999999999999999999874 21 0100 0011 23788755 3766 444
Q ss_pred CCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 001990 803 GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYM 882 (985)
Q Consensus 803 GPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l 882 (985)
-| +|.+++++++++.+... +. ....+++.|+++.++++.+.|..+.++++ .++..++.++|
T Consensus 274 ~P-i~av~~~~~i~~~~~~~--~~-------------~~~~~T~~gnpl~~Aaala~L~~l~~~~l---~~~~~~~g~~l 334 (428)
T PRK12389 274 LP-IGAYGGRKDIMEQVAPL--GP-------------AYQAGTMAGNPASMAAGIACLEVLQQEGV---YEKLDRLGAML 334 (428)
T ss_pred Cc-eeEEeEHHHHHhhhccC--CC-------------cccccCCccCHHHHHHHHHHHHHHhcccH---HHHHHHHHHHH
Confidence 45 55567888877655310 00 00112344577778888888988876654 34566778888
Q ss_pred HHHHhcc---CCe--eEcCCCCceeEEEEEEecCccc----c--CCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccC
Q 001990 883 AKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKN----T--AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTE 951 (985)
Q Consensus 883 ~~~L~~~---~~i--~~~g~~~~~~~~~vv~~~~~~~----~--~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~ 951 (985)
+++|++. +++ ...+-.+ .+ .+.+..+.... . .......+.+.|.++|+.+....+ +. +.|+.
T Consensus 335 ~~~L~~l~~~~~~~~~v~r~~g-~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~--~~~~l 407 (428)
T PRK12389 335 EEGILEAAEKHGITITINRLKG-AL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY---EA--WFLTT 407 (428)
T ss_pred HHHHHHHHHhCCCCEEEEecCc-EE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC---CC--eeecC
Confidence 8888752 222 1111111 21 12221110000 0 000134678888999999754322 22 34678
Q ss_pred CCCHHhhchHHHHHHHHHHHHHH
Q 001990 952 SESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 952 ~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+|++||| ++++++++++++
T Consensus 408 ~~t~e~id---~~~~~l~~~l~~ 427 (428)
T PRK12389 408 AHTEEDIE---ETLEAVDRAFAQ 427 (428)
T ss_pred CCCHHHHH---HHHHHHHHHHHh
Confidence 89999999 999999988754
No 296
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.67 E-value=2.5e-14 Score=166.32 Aligned_cols=291 Identities=15% Similarity=0.164 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHhC----CC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC------
Q 001990 634 FNNLGEWLCTITG----FD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------ 701 (985)
Q Consensus 634 ~~el~~~la~l~G----~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G------ 701 (985)
..++.++|++++. .. ...++.+||+++++++++.+|.| ++|++||. ..++||....+....|
T Consensus 80 ~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~ 153 (412)
T TIGR02407 80 KREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKV------TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQ 153 (412)
T ss_pred HHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhh------cCCCeEEEECCCcCCchHHHHHhcCCccccc
Confidence 4467778887642 22 22344589999999999988876 24556765 6689998766543221
Q ss_pred ------cEEEEEeCCCCC---CCCHHHHHHHHHhcC---CCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEE
Q 001990 702 ------MKIVSVGTDAKG---NINIEELRKAAEANR---DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYM 765 (985)
Q Consensus 702 ------~~v~~v~~~~~g---~iDle~L~~~i~~~~---~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliV 765 (985)
..+..+|.+... ..+++.+++.++++. +++++|+++.. +..|++.+ .+++|.++|+++|+++|+
T Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 233 (412)
T TIGR02407 154 GAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIV 233 (412)
T ss_pred CCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 133445542111 135788899887543 46778877542 45677532 499999999999999999
Q ss_pred EccccccccCCCCCC--------cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCC
Q 001990 766 DGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (985)
Q Consensus 766 D~a~~~~~~g~~~~g--------~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~ 837 (985)
|+++. |+.+.| ...+|+++++ |+++ .||-.+|++++++++ ..+.... +
T Consensus 234 DEV~t----G~GRtG~~~a~~~~~v~PDi~~~~--K~lg----~~G~pigav~~~~~~-~~~~~~~---------~---- 289 (412)
T TIGR02407 234 DDIQA----GCGRTGTFFSFEPAGIEPDIVCLS--KSIS----GYGLPLALTLIKPEL-DVWKPGE---------H---- 289 (412)
T ss_pred echhh----CCCccchhHHhcccCCCCCEEEec--hhcc----CCccceeEEEEchhh-hccCCCc---------c----
Confidence 99873 232222 2347988764 8773 324558889888765 3322110 0
Q ss_pred CCCCcccccchhhhHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhc---cCC-eeEcCCCCceeEEEEEEecCc
Q 001990 838 PLGTIAAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEK---HYP-ILFRGVNGTVAHEFIVDLRGL 912 (985)
Q Consensus 838 ~t~~i~s~~~g~~~~~~~A~a~l~~-lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~-i~~~g~~~~~~~~~vv~~~~~ 912 (985)
.+++.|+++.++++.+.+.. +..+.+. ++..+..++++++|+. .+. +....+....+ +-+.+..
T Consensus 290 -----~~T~~gnpl~~aaa~a~l~~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~--~~l~l~~- 358 (412)
T TIGR02407 290 -----NGTFRGNNLAFVTATAALEYYWSDDAFE---KAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLM--QGIECGD- 358 (412)
T ss_pred -----CCCCCccHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHHHhhCCCceEeeecceeE--EEEEecC-
Confidence 01122455555666777774 5544343 4555666777777764 122 21111111111 2333321
Q ss_pred cccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 913 KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 913 ~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
......+.+.|.++|+.+.... +..+.||++|+..+|++|+| +++++|+++++
T Consensus 359 ----~~~~~~~~~~~~~~Gv~v~~~~-~~~~~lr~~p~l~~t~~~i~---~~~~~l~~~l~ 411 (412)
T TIGR02407 359 ----GDLAGKIAKAAFENGLIIETSG-PNDEVIKLLPPLTIDEETLQ---QGLDILEQAVE 411 (412)
T ss_pred ----hHHHHHHHHHHHHCCCEEeccC-CCCCEEEEECCCCCCHHHHH---HHHHHHHHHHh
Confidence 1234678889999999975322 22478999999999999999 99999998875
No 297
>PRK08960 hypothetical protein; Provisional
Probab=99.66 E-value=1.9e-14 Score=166.56 Aligned_cols=290 Identities=10% Similarity=0.063 Sum_probs=170.4
Q ss_pred hcHHHHHHHHHHHHHHHhCC--CccceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+.+|. +...+..++| ++|.. ++++.+. .++++|+++++.|..+...+...|.++
T Consensus 69 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 140 (387)
T PRK08960 69 RGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALL---LASSLLV-----DPGKHWLLADPGYPCNRHFLRLVEGAA 140 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCeE
Confidence 56555555555555555454 4444544444 44442 2333321 467899999998888887788889999
Q ss_pred EEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cC-CC
Q 001990 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 777 (985)
Q Consensus 705 ~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g-~~ 777 (985)
+.++++.+ +.+|+++++++++ ++++++++++| |++|.+.+ .+++|+++|+++|+++++|+++..-. .. ..
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~ 217 (387)
T PRK08960 141 QLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA 217 (387)
T ss_pred EEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 99998754 4799999999887 67888999999 68999861 47788888999999999999874211 00 00
Q ss_pred CCCcCCCc-EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHH
Q 001990 778 SPGYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (985)
Q Consensus 778 ~~g~~g~D-i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A 856 (985)
.......+ +++.|++|.|+. .|.++|++++++++++.+.... .....+.+...+ .++
T Consensus 218 ~~~~~~~~vi~~~S~SK~~g~----~GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~s~~~q----~a~ 275 (387)
T PRK08960 218 SVLEVDDDAFVLNSFSKYFGM----TGWRLGWLVAPPAAVPELEKLA--------------QNLYISASTPAQ----HAA 275 (387)
T ss_pred ChhhccCCEEEEeecccccCC----cccEEEEEEcCHHHHHHHHHHH--------------hhhccCCCHHHH----HHH
Confidence 11112223 566788888753 4678999999887665432100 000111111111 112
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCcc
Q 001990 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (985)
Q Consensus 857 ~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~~ 934 (985)
.+.+.....+-+.+..+...++.+.+.+.|++ ++.+.. .+.+..+ +.++++. .+.+..++++.|. ++||.+
T Consensus 276 ~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~f--~~~~~~~----~~~~~~~~~~~ll~~~gi~v 348 (387)
T PRK08960 276 LACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAV-EPQGAFY--LYADISA----FGGDAFAFCRHFLETEHVAF 348 (387)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCc-CCCeeEE--EEEeccc----cCCCHHHHHHHHHHhCCEEE
Confidence 22222111122334444556667788888876 333211 1212221 3345431 1246678888875 679987
Q ss_pred CCC-CCC---CCCEEEEeccCCCCHHhhc
Q 001990 935 PTM-SWP---VPGTLMIEPTESESKVCHN 959 (985)
Q Consensus 935 ~~~-~~p---v~~~lris~t~~~t~eeId 959 (985)
... .|. ..+++|++++. +.+++.
T Consensus 349 ~pg~~f~~~~~~~~iRi~~~~--~~~~l~ 375 (387)
T PRK08960 349 TPGLDFGRHQAGQHVRFAYTQ--SLPRLQ 375 (387)
T ss_pred cCchHhCCCCCCCeEEEEecC--CHHHHH
Confidence 432 121 24689999974 344444
No 298
>PRK07337 aminotransferase; Validated
Probab=99.66 E-value=1.4e-14 Score=167.74 Aligned_cols=302 Identities=13% Similarity=0.124 Sum_probs=177.2
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cccceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+.+|. +...+.. ++++++.. +++..+. .++|+|+++++.|..+...++..|.++
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 138 (388)
T PRK07337 67 LGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL---LACLALV-----ERGDEVLMPDPSYPCNRHFVAAAEGRP 138 (388)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCEE
Confidence 56556565666666655664 3344444 44444432 2222221 467899999998887777778889999
Q ss_pred EEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC-CC
Q 001990 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 777 (985)
Q Consensus 705 ~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g-~~ 777 (985)
+.+|.+. ++.+|++++++.++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..-. .+ ..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 215 (388)
T PRK07337 139 VLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV 215 (388)
T ss_pred EEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 9999864 35899999999987 78899999999 5799876 258999999999999999998864211 11 11
Q ss_pred CCCcCCCcEE-EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHH
Q 001990 778 SPGYIGADVC-HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (985)
Q Consensus 778 ~~g~~g~Di~-~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A 856 (985)
....++.+++ +.|++|.|+. .|.++|++++++++.+.+..... .. ..+.+...+. ++
T Consensus 216 ~~~~~~~~vi~~~S~SK~~~~----~G~RiG~~~~~~~l~~~l~~~~~------------~~--~~~~s~~~q~----~~ 273 (388)
T PRK07337 216 SALSLGDDVITINSFSKYFNM----TGWRLGWLVVPEALVGTFEKLAQ------------NL--FICASALAQH----AA 273 (388)
T ss_pred ChhhccCCEEEEEechhhcCC----chhheeeeecCHHHHHHHHHHHH------------Hh--ccCCChHHHH----HH
Confidence 1122344554 5688888854 36789999998776544321000 00 0111111111 11
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH-HHCCCcc
Q 001990 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHG 934 (985)
Q Consensus 857 ~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L-~e~Gi~~ 934 (985)
...+..-..+.+.+..+...++.+++.+.|++ ++.+.. .+.+.. .+.++++........+..++++.| .++||.+
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~--f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 350 (388)
T PRK07337 274 LACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPV-MPDGAF--YVYADCRGVAHPAAGDSAALTQAMLHDAGVVL 350 (388)
T ss_pred HHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCeeE--EEEEecccccCCCCCCHHHHHHHHHHhCCEEE
Confidence 12221111122444445556777888888877 333211 122222 234555421000124667888775 5689987
Q ss_pred CCC-CC---CCCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 935 PTM-SW---PVPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 935 ~~~-~~---pv~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
... .| +..+.+|++++. +.+++. ..++.|.+
T Consensus 351 ~pg~~f~~~~~~~~~Ri~~~~--~~~~l~---~~l~rl~~ 385 (388)
T PRK07337 351 VPGRDFGPHAPRDYIRLSYAT--SMSRLE---EAVARLGK 385 (388)
T ss_pred eCchhhCCCCCCCEEEEEecC--CHHHHH---HHHHHHHH
Confidence 432 12 124789999974 456555 55555544
No 299
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=3.5e-14 Score=166.14 Aligned_cols=290 Identities=17% Similarity=0.176 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
..++.++|+++++.+ ...++.+||+++++++++.+|.| +++++||. ..++||.....+...|.
T Consensus 99 ~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 99 AVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYH------TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHH------hCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 457888888887521 23578899999999999988876 24556765 66899988665443221
Q ss_pred -----EEEEEeCCCCCC-------------CCHHHHHH-HHHh--cCCCeEEEEEEcC-CCccccccC----HHHHHHHH
Q 001990 703 -----KIVSVGTDAKGN-------------INIEELRK-AAEA--NRDNLSTLMVTYP-STHGVYEEG----IDEICKII 756 (985)
Q Consensus 703 -----~v~~v~~~~~g~-------------iDle~L~~-~i~~--~~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la 756 (985)
.+..+|...... .+++.+++ .+++ +.+++++|+++.. +..|.+. + +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~-~~~~~l~~l~~l~ 251 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVV-PPKNFFKELRKLA 251 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcC-CCHHHHHHHHHHH
Confidence 133344321100 12344666 3332 2367888877643 4567776 5 99999999
Q ss_pred HHcCCEEEEEccccccccCCCCCC------cCC--CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC
Q 001990 757 HDNGGQVYMDGANMNAQVGLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (985)
Q Consensus 757 ~~~g~lliVD~a~~~~~~g~~~~g------~~g--~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~ 828 (985)
++||+++++|+++. + +.+.| .+| +|++++ .|.+ + ||..+|++++++++....++..
T Consensus 252 ~~~g~lli~DEv~t-G---~gr~G~~~a~~~~gv~pDivt~--~K~l----~-~G~p~gav~~~~~i~~~~~~~~----- 315 (441)
T PRK05769 252 DKYGILLIDDEVQT-G---MGRTGKMFAIEHFGVEPDIITL--AKAI----A-GGLPLGAVIGRAELMFLPPGSH----- 315 (441)
T ss_pred HHcCCEEEEechhh-C---CCcccceehhhccCCCCCEEEE--cccc----c-CCcccEEEEEehhhhhcCCCCC-----
Confidence 99999999999874 2 22222 222 588865 3766 3 3345777888877765433110
Q ss_pred CCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeE--cCCCCceeE
Q 001990 829 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILF--RGVNGTVAH 903 (985)
Q Consensus 829 ~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~~--~g~~~~~~~ 903 (985)
+ +++.|++..++++.+.|..+.+ + ..++..++.++|++.|++. +.+.. .|. + .+
T Consensus 316 -----------~---~T~~g~p~~~aaa~a~L~~l~~-~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G-~~- 374 (441)
T PRK05769 316 -----------A---NTFGGNPVAAAAALATLEELEE-G---LLENAQKLGEYLRKELKELKEKYEFIGDVRGL-G-LM- 374 (441)
T ss_pred -----------C---CCCCcCHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeecc-e-EE-
Confidence 0 1123455666677778877754 3 3456677788898888752 33221 111 1 11
Q ss_pred EEEEEecCc-cccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 904 EFIVDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 904 ~~vv~~~~~-~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+.+.+..- +.........+.+.|.++|+++.... .+.||++|+..+|++||| +++++|.+++.+
T Consensus 375 -~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~---~~~lr~~p~l~~t~~~id---~~~~~l~~~l~~ 439 (441)
T PRK05769 375 -IGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG---KSAIRIIPPLIITEEEAD---IGLEILEEAIKE 439 (441)
T ss_pred -EEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC---CCEEEEeCCCCCCHHHHH---HHHHHHHHHHHH
Confidence 22223100 00000113467788889999874322 368999999999999999 999999998765
No 300
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=7.2e-15 Score=169.51 Aligned_cols=272 Identities=18% Similarity=0.082 Sum_probs=187.2
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+. +.+++|||+++.++++++ +. +||+||+++..|+.+...+...++..|+++++++. ++
T Consensus 68 ~~Le~~lA~l~g~~~--~l~~~sgt~Ai~~~l~al-~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~ 142 (394)
T PRK07050 68 LALAQRLAEIEGGRH--ALLQPSGLAAISLVYFGL-VK--AGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG 142 (394)
T ss_pred HHHHHHHHHHhCCCe--EEEeccHHHHHHHHHHHH-hC--CCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence 457789999999764 788899999998888776 33 89999999999999887776666778999999975 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ +.++|++|++.+| |++|.+.|+++|+++||++|+++++| +.++.+....|.++|+||++.|. |.+++. |+
T Consensus 143 l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD-~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~---~~ 218 (394)
T PRK07050 143 IADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID-NTYSAGLAFKPFEHGVDISVQALTKYQSGG---SD 218 (394)
T ss_pred HHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE-CCcccccccCHHHcCCeEEEEECCceecCC---CC
Confidence 766 7889999999998 68999999999999999999999995 45677777778889999999998 888531 22
Q ss_pred CceEEEEE-chhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~-~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
.-.|.+.+ ++++.+++- ..|..-|. | ..+. ..|+...|.+.+...
T Consensus 219 ~~gG~v~~~~~~~~~~~~-------------------------~~~~~~G~---~-~~~~-----~a~l~lr~l~tl~~R 264 (394)
T PRK07050 219 VLMGATITADAELHAKLK-------------------------LARMRLGI---G-VSAD-----DCSLVLRGLPSLQVR 264 (394)
T ss_pred eeEEEEEECCHHHHHHHH-------------------------HHHHhcCC---C-CCHH-----HHHHHHcCCCcHHHH
Confidence 11344444 455544430 00111110 0 0121 124455666677777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcceEEEecCC------HHHHHHHHHHcCceee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD------AHAIASAAYKIEMNLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~------~~~l~~~L~~~Gi~~~--- 500 (985)
.++..++|.++++.|++..++. ++.+ + ....|+|.+.+ ..++.+.|...++-.+
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~ 344 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGG 344 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCC
Confidence 7888899999999999874343 2211 1 11235555532 4556666655444211
Q ss_pred ------e------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 501 ------V------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 501 ------~------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
+ ..++.+|+|++.-+.++-|+.|.++|.
T Consensus 345 ~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~ 390 (394)
T PRK07050 345 ACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALE 390 (394)
T ss_pred ccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 012578999988766666677777765
No 301
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.66 E-value=4.7e-14 Score=165.07 Aligned_cols=311 Identities=13% Similarity=0.090 Sum_probs=176.6
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cccce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+-.|. +...+ +++++++|.. ++++.+. .++++|+++++.+..+...+...|+++
T Consensus 94 ~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~---l~~~~l~-----~~Gd~Vlv~~P~y~~y~~~~~~~g~~~ 165 (430)
T PLN00145 94 VGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIE---IIMSVLA-----QPGANILLPRPGYPLYEARAVFSGLEV 165 (430)
T ss_pred ccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 56555444444444443343 33344 4444455443 3333321 367899999987777667778899999
Q ss_pred EEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cC--C
Q 001990 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG--L 776 (985)
Q Consensus 705 ~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g--~ 776 (985)
+.+++.+ ++.+|+++++++++ ++++++++++| |++|.+.+ .+++|+++|+++|+++++|+++..-. .+ +
T Consensus 166 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~ 242 (430)
T PLN00145 166 RHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPF 242 (430)
T ss_pred EEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCc
Confidence 9988643 46899999999987 78999999999 57999872 38899999999999999999874211 11 1
Q ss_pred CCCCcCC---CcEEEeCCcccccccCCCCCCcceeeeec--ccccCcC--CCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 777 TSPGYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFL--PSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 777 ~~~g~~g---~Di~~~s~hKtl~~p~g~GGPg~G~l~~~--~~l~~~l--pg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
.....++ .=+++.|+.|+|++| |+++|++++. +.+.... ...+ . .......+.+...+
T Consensus 243 ~~~~~~~~~~~vi~~~S~SK~~~~p----G~RlG~iv~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~Q 307 (430)
T PLN00145 243 VPMGVFGEVAPVLTLGSISKRWVVP----GWRLGWIATCDPNGILKETKVVDSI-R----------NYLNISTDPATFVQ 307 (430)
T ss_pred cchhhhcccCcEEEEeccccccCCC----CeeEEEEEEecchhhhhhhHHHHHH-H----------HHhcccCCCCHHHH
Confidence 1111111 225677778887654 8999999873 2222110 0000 0 00000111110111
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeE-cCCCCceeEEEEEEecCccccCCC-CHHHHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILF-RGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL 927 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~-~g~~~~~~~~~vv~~~~~~~~~g~-~~~~l~~~L 927 (985)
.++..+|..-.++-+++..+...++++.+.+.|++...+.. ..+.+..+ +.++++. ....+. +..+++.+|
T Consensus 308 ----~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y--~~v~l~~-~~~~~~~~~~~~~~~l 380 (430)
T PLN00145 308 ----GAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMF--VMVKLDL-SCLSGIKDDMDFCCKL 380 (430)
T ss_pred ----HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeE--EEeccCh-hhcCCCCCHHHHHHHH
Confidence 11122232111233455566667778888888876322211 11222222 3344320 000012 455677655
Q ss_pred H-HCCCccCC-CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 928 M-DYGFHGPT-MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 928 ~-e~Gi~~~~-~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
. ++|+.+.. ..|..++++||+++. +.++++ ..++.|++.+.+.+
T Consensus 381 l~~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~---~al~rl~~~~~~~~ 426 (430)
T PLN00145 381 AKEESVVVLPGSALGMKNWLRITFAI--DPPSLE---DGLERLKSFCLRHA 426 (430)
T ss_pred HHhCCEEEeCccccCCCCeEEEEeCC--CHHHHH---HHHHHHHHHHHHhc
Confidence 5 66887632 223346899999973 566666 77777766665544
No 302
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.66 E-value=5e-14 Score=163.77 Aligned_cols=297 Identities=14% Similarity=0.192 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHh-cCC-CCCCEEEE-cCCCCCCcHHHHHhcCcE------
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCII-PVSAHGTNPATAAMCGMK------ 703 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~-~g~-~~~~~Vlv-~~~~Hg~~~~~~~~~G~~------ 703 (985)
...++++.++++++.+. .++++||++++++++..++.+... +|. ..+++||+ ...+||.........+-.
T Consensus 74 ~~~~~~~~l~~~~~~~~-~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~ 152 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDK-VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF 152 (400)
T ss_pred HHHHHHHHHHhCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC
Confidence 56788899999988765 467889999999998887765322 221 12355665 557788776654432211
Q ss_pred ------EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccc
Q 001990 704 ------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 704 ------v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
+..+++ .|+++|+++++ .+++++|+++.+ |.+|.+.++ +++|.++|++||+++++|+++. ++
T Consensus 153 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~ 224 (400)
T PTZ00125 153 GPFVPGFELVDY-----NDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GL 224 (400)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CC
Confidence 122222 48999999996 267898888765 578987722 9999999999999999999874 32
Q ss_pred c--CCC-CC--CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 774 V--GLT-SP--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 774 ~--g~~-~~--g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
+ |-. .. ....+|+++++ |+|+ .|++++|++++++++.+.+.....+ .+ .. +
T Consensus 225 g~~G~~~~~~~~~~~pd~~~~s--K~l~----~g~~~ig~v~~~~~~~~~~~~~~~~------------~t--~~----~ 280 (400)
T PTZ00125 225 GRTGKLLAHDHEGVKPDIVLLG--KALS----GGLYPISAVLANDDVMLVIKPGEHG------------ST--YG----G 280 (400)
T ss_pred CccchhhHHHhcCCCCCEEEEc--cccc----CCCcCcEEEEEcHHHHhhccCCCCC------------CC--CC----c
Confidence 2 100 01 11236888764 8884 3455799999998877655321100 01 11 1
Q ss_pred hhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccccCCCCHHHH
Q 001990 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (985)
Q Consensus 849 ~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l 923 (985)
.+..+.++.+.++.+..+++. ++...+.++++++|++. .... ..+ .+. + +.+.++. ..+.+..++
T Consensus 281 ~~~~~~aa~~~l~~i~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~-~--~~v~~~~---~~~~~~~~~ 350 (400)
T PTZ00125 281 NPLACAVAVEALEVLKEEKLA---ENAQRLGEVFRDGLKELLKKSPWVKEIRG-KGL-L--NAIVFDH---SDGVNAWDL 350 (400)
T ss_pred CHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHhcCCCeEEEec-ccE-E--EEEEEcc---CcchHHHHH
Confidence 233334445556665444443 34445667777777652 1111 111 121 1 2222320 012356788
Q ss_pred HHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 924 ~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
.+.|.++||.+.... .+.||++++..++++||+ ++++.|.++++++..+
T Consensus 351 ~~~l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~---~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 351 CLKLKENGLLAKPTH---DNIIRFAPPLVITKEQLD---QALEIIKKVLKSFDSN 399 (400)
T ss_pred HHHHHHCCeEEeecC---CCEEEEECCccCCHHHHH---HHHHHHHHHHHHHhcC
Confidence 999999999874321 478999999999999999 9999999988876543
No 303
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.66 E-value=2.5e-14 Score=165.39 Aligned_cols=294 Identities=15% Similarity=0.127 Sum_probs=178.8
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Ccc-ceecChHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~-~~~~~sGa-~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|. +.. .+.+++|+ ++. .++++.+. .++++|+++++.+..+...++..|.+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i---~~~~~~~~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~ 140 (385)
T PRK09276 69 EGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI---AHIPLAFV-----NPGDVVLVPDPGYPVYKIGTIFAGGE 140 (385)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH---HHHHHHhC-----CCCCEEEEcCCCCcChHHHHHHcCCE
Confidence 56556666666666665565 333 35554554 443 22333321 46789999998887777778889999
Q ss_pred EEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cCC-
Q 001990 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL- 776 (985)
Q Consensus 704 v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g~- 776 (985)
++.+|.+.+ ..+|++++++.+. +++++|++++| |++|.+.+ .+++|+++|+++|+++++|+++.... .+.
T Consensus 141 ~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (385)
T PRK09276 141 PYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK 217 (385)
T ss_pred EEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC
Confidence 999998643 4589999998886 68899999998 57999872 37899999999999999999974221 111
Q ss_pred -CCC----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 -TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 -~~~----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
... ...+..+.+.|+.|.|+. .|.++|++++++++.+.+.... ......+. ..
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~g~----~GlRiG~~i~~~~l~~~~~~~~------------~~~~~~~~------~~ 275 (385)
T PRK09276 218 PPSFLEVPGAKDVGIEFHSLSKTYNM----TGWRIGFAVGNADLIAGLGKVK------------SNVDSGVF------QA 275 (385)
T ss_pred CCChhccCCCcCCEEEEecchhhcCC----cchhheeeeCCHHHHHHHHHHH------------hhccCCCC------HH
Confidence 010 111234677888888854 3678999998877665442100 00000111 11
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-H
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e 929 (985)
...++..++.. ...-+.+..+...++++++.+.|++ ++.+. .+.+.++ +.++++ .+.+..++++.|. +
T Consensus 276 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~~--~~v~~~-----~~~~~~~l~~~ll~~ 345 (385)
T PRK09276 276 IQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKLGLEVE--PPKATFY--VWAPVP-----KGYTSAEFATLLLDK 345 (385)
T ss_pred HHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEEECC-----CCCCHHHHHHHHHHh
Confidence 11112222221 2233445555666778888888887 33322 2222221 344543 2457788988886 5
Q ss_pred CCCccCCCC-CC--CCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 930 YGFHGPTMS-WP--VPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 930 ~Gi~~~~~~-~p--v~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
+||.+.... +. .++++||++. .+++++. ..++.|.
T Consensus 346 ~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~---~~l~~l~ 383 (385)
T PRK09276 346 AGVVVTPGNGFGEYGEGYFRIALT--VPDERIE---EAVERIK 383 (385)
T ss_pred CCEEECCchhhCCCCCCeEEEEeC--CCHHHHH---HHHHHHh
Confidence 799875421 22 2478999986 3556555 5554443
No 304
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.6e-14 Score=165.30 Aligned_cols=282 Identities=13% Similarity=0.105 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhCCCcc-ceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~~-~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++.+++++|.+.. .+..++|++.. ..++++.+. .++++|+++.+.|..+...++..|++++.+|.++++
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~--i~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~ 138 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDEL--IQLLALACA-----KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADF 138 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHH--HHHHHHHhc-----CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 4788899999998643 45555665422 122222221 367899999886666666678899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccC--CC-CCCcCCCcEEEe
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LT-SPGYIGADVCHL 789 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g--~~-~~g~~g~Di~~~ 789 (985)
.+|+++++++++. .++++|++++| |++|.+. +.+++.++++..++++++|+++.. +.. +. ......--+++.
T Consensus 139 ~~d~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~~~ 214 (356)
T PRK04870 139 TLDLPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAAPGLVVVDEAYQP-FAGDSWLPRLARFPNLLVMR 214 (356)
T ss_pred CCCHHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCchh-hcCcchHHHHhhCCCEEEEe
Confidence 9999999999862 47888999998 5799998 778888887776899999998732 111 00 011122235677
Q ss_pred CCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHH
Q 001990 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (985)
Q Consensus 790 s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~ 869 (985)
|++| ++ ..|.++|++++++++++.+.... ...+++ ..++ .++...+.. .+.+.
T Consensus 215 S~SK-~~----~~GlRiG~~i~~~~~i~~~~~~~--------------~~~~~~--~~~q----~~a~~~l~~--~~~~~ 267 (356)
T PRK04870 215 TVSK-LG----LAGLRLGYLAGHPAWIAELDKVR--------------PPYNVN--VLTQ----ATALFALEH--VDVLD 267 (356)
T ss_pred cchh-hh----hHHHhhhhhhCCHHHHHHHHHcc--------------CCCcCC--HHHH----HHHHHHHhC--HHHHH
Confidence 7777 54 34778999999877665442110 000111 1111 112222221 22355
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CC-C-CCCEEE
Q 001990 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW-P-VPGTLM 946 (985)
Q Consensus 870 ~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~-p-v~~~lr 946 (985)
+..++..++++++.+.|++..++....+.+. .+.+.++ +..++.+.|.++||.+... .+ + .++.+|
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iR 336 (356)
T PRK04870 268 AQAAQLRAERTRLAAALAALPGVTVFPSAAN---FILVRVP--------DAAAVFDGLKTRGVLVKNLSGMHPLLANCLR 336 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEECCCCCe---EEEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCCCeEE
Confidence 5556667778888888876223322222121 2334432 4578889999999987432 12 1 357899
Q ss_pred EeccCCCCHHhhchHHHHHHHHHHH
Q 001990 947 IEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 947 is~t~~~t~eeId~~~~~i~aL~~i 971 (985)
++++ +.+|++ +|+++|+++
T Consensus 337 is~~---~~~~~~---~l~~al~~~ 355 (356)
T PRK04870 337 VTVG---TPEENA---QFLAALKAA 355 (356)
T ss_pred EeCC---CHHHHH---HHHHHHHHh
Confidence 9985 789999 999999875
No 305
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=2.3e-14 Score=164.37 Aligned_cols=273 Identities=19% Similarity=0.177 Sum_probs=187.2
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+ ++.++.||++++.++++++ .. +||+|+++...|+.....+....+..|++++.++. ++
T Consensus 56 ~~Le~~lA~leg~e--~ivvt~gg~~Ai~~~l~al-l~--~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 56 GLLEQTLSELESGK--GAVVTNCGTSALNLWVSAL-LG--PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-cC--CCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 34678999999965 4888999999988888776 33 89999999999998888776656667899988864 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|||++++|+ |++++|..
T Consensus 131 l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvD-ea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d--- 206 (388)
T PRK08861 131 LDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVD-NTFLTPVLQKPLELGADFVIHSTTKYINGHSD--- 206 (388)
T ss_pred HHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCccccccCCCcccCCCEEEeecceeccCCCc---
Confidence 655 7789999999998 78999999999999999999999995 45666666778889999999999 87765421
Q ss_pred CceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
--.|++.+++ ++.+++. ..|..-|. . .+++ ..|+...|-+-|.-+
T Consensus 207 ~~gG~i~~~~~~~~~~~~-------------------------~~~~~~G~--~--~~p~-----~a~l~~rgl~Tl~lR 252 (388)
T PRK08861 207 VIGGVLITKTKEHAEELA-------------------------WWGNCIGA--T--GTPF-----DSYMTLRGIRTLGAR 252 (388)
T ss_pred ceeEEEEecHHHHHHHHH-------------------------HHHhccCC--C--CChH-----HHHHHHhcCCCHHHH
Confidence 1146666643 3333220 00111110 0 0122 124567777778888
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHH--cCceee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~----~~~l~~~L~~--~Gi~~~--- 500 (985)
.+++.++|..+++.|++.+.++ |. +. | +..-|+|.+.+ +.++.+.|.= .+..+.
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 332 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVE 332 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCc
Confidence 8999999999999999885453 32 11 1 11246776654 3333333331 122110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 ------------~----------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +.++.||+|++.-+.++=|++|.++|..
T Consensus 333 sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~ 383 (388)
T PRK08861 333 SLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAK 383 (388)
T ss_pred ceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 0 1246799999987766666777777753
No 306
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.66 E-value=7.6e-14 Score=165.01 Aligned_cols=298 Identities=12% Similarity=0.069 Sum_probs=182.5
Q ss_pred hHhhHHHHHHHHHHHHHHHhhCCC-------------CcceeeccchHHHHHHHHHHhhhhc-C----------------
Q 001990 204 EIAQGRLESLLNFQTMIADLTGLP-------------MSNASLLDEGTAAAEAMAMCNNIQK-G---------------- 253 (985)
Q Consensus 204 e~sqg~l~~i~e~q~~ia~L~g~~-------------~~~~sl~~~~ta~~ea~~~a~~~~~-~---------------- 253 (985)
+.|....+...+.-.|++++++.. .+...+++|||.+.-.++++.|... +
T Consensus 122 ~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~ 201 (522)
T TIGR03799 122 ETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAA 201 (522)
T ss_pred ecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhh
Confidence 345555566667778899988521 2335677788765544444333210 0
Q ss_pred ------CCCEEEEcCCCChhHHHHHHHhhcCCCe-EEEEeCc--------hhhhc-cC----CCEeEE--EEEcC-CCCe
Q 001990 254 ------KKKTFIIASNCHPQTIDICITRADGFDI-KVVVSDL--------KDIDY-KS----GDVCGV--LVQYP-GTEG 310 (985)
Q Consensus 254 ------~g~~Vlv~~~~h~s~~~~~~~~a~~~gi-~v~~~~~--------~~l~~-l~----~~t~~V--~v~~p-n~~G 310 (985)
++..|++++.+|.|+.+.++.+ +.|. .++.++. ++|++ +. .+++.+ +.+.. +.+|
T Consensus 202 ~~~~~~~~~~v~~S~~~H~S~~kaa~~l--glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 202 LKHYGYDGLAILVSERGHYSLGKAADVL--GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETG 279 (522)
T ss_pred hhhccCCceEEEECCCchHHHHHHHHHc--CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCC
Confidence 2347999999999998886543 2221 4555543 34554 42 344334 33454 4699
Q ss_pred eeccHHHHHHHHHhCCcEEEEEeccccccCCCCC------Cc-ccceEEEecC-ccccccCCCCCCceEEEEEch-hhHh
Q 001990 311 EVLDYGDFIKNAHANGVKVVMATDLLALTILKPP------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKR 381 (985)
Q Consensus 311 ~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p------~~-~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~-~~~~ 381 (985)
.++|+++|+++|+++|++++||+ .++.+.+..+ .. .+||.++.++ |++++|++ +|++++++ ++.+
T Consensus 280 aiDpl~eIa~i~~~~g~~lHVDa-A~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~ 353 (522)
T TIGR03799 280 NIDPLDEMADIAQELGCHFHVDA-AWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMS 353 (522)
T ss_pred CcCCHHHHHHHHHHcCCeEEEEc-hhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHH
Confidence 99999999999999999999954 2232222221 22 3899999999 66777754 57888875 4545
Q ss_pred cCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHH
Q 001990 382 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 461 (985)
Q Consensus 382 ~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L 461 (985)
.+... ..+-.. .+...+ .+.+.|-++++. + ..+-++ +.++|.+|++++.+++.++++|+.+.|
T Consensus 354 ~~~~~-~~Yl~~-~~~~d~--------~~~~legsR~~~----a-l~lw~a--L~~lG~~G~~~ii~~~~~la~~l~~~L 416 (522)
T TIGR03799 354 AIEHH-AEYILR-KGSKDL--------GSHTLEGSRPGM----A-MLVYAG--LHIIGRKGYELLIDQSIEKAKYFADLI 416 (522)
T ss_pred HhccC-cchhcC-CCCCcc--------ccceeecCcchH----H-HHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55321 000000 000000 001122121221 2 123333 478899999999999999999999999
Q ss_pred hcCCCEEEcCCCCcceEEEecC-C------------------------HHHHHHHHHHcCce-eeee--c----C----C
Q 001990 462 KKLGTVEVQGLPFFDTVKVKCA-D------------------------AHAIASAAYKIEMN-LRVV--D----S----N 505 (985)
Q Consensus 462 ~~~g~~~~~~~~~~~~~~i~~~-~------------------------~~~l~~~L~~~Gi~-~~~~--~----~----~ 505 (985)
++..+++++.++.++.++|+.. . ...+.+++.+.|.. +... . . -
T Consensus 417 ~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~ 496 (522)
T TIGR03799 417 QQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTV 496 (522)
T ss_pred hhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcE
Confidence 9885599998776777777631 0 23566666666764 3321 1 1 3
Q ss_pred eEEEEec-cCCCHHHHHHHHHH
Q 001990 506 TVTASFD-ETTTLEDVDKLFIV 526 (985)
Q Consensus 506 ~lris~~-~~~t~edid~ll~~ 526 (985)
.+|+++. +.+|++|++.+++.
T Consensus 497 ~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 497 VFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEecCCCCCHHHHHHHHHH
Confidence 4899884 57889999988764
No 307
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.66 E-value=7.4e-15 Score=166.59 Aligned_cols=272 Identities=18% Similarity=0.111 Sum_probs=175.3
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc----
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---- 288 (985)
..++++.+++++| ..++.++.+||.++..++.++ + ++||+|++++..|++....+. .+...|++++.++.
T Consensus 34 ~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l-~--~~gd~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 34 TAKLEARAAELFG--KEAALFVPSGTAANQLALAAH-T--QPGGSVICHETAHIYTDEAGA-PEFLSGVKLLPVPGENGK 107 (338)
T ss_pred HHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHh-c--CCCCeEEEecCcceeeecCCc-HHHHcCceEEeecCCCCc
Confidence 4567789999999 345778888887766555544 2 378999999999987654321 12235788777754
Q ss_pred ---hhhhc-cCC-------CEeEEEEEcCCCCee---eccHHHHHHHHHhCCcEEEEE-eccc----cccCCCCCCcccc
Q 001990 289 ---KDIDY-KSG-------DVCGVLVQYPGTEGE---VLDYGDFIKNAHANGVKVVMA-TDLL----ALTILKPPGELGA 349 (985)
Q Consensus 289 ---~~l~~-l~~-------~t~~V~v~~pn~~G~---i~dl~~I~~~a~~~galliV~-a~~~----alg~l~~p~~~Ga 349 (985)
+++++ +.+ ++++|++.+||..|. +.|+++|+++||++|++++|| ++.. +.|........++
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~ 187 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGV 187 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcC
Confidence 44555 443 789999999966675 457889999999999999994 2110 1121001123589
Q ss_pred eEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHH
Q 001990 350 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (985)
Q Consensus 350 Di~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a 428 (985)
|+++.+. |+++.| +.++++.++++++++.... . . ..++.+. .++.+
T Consensus 188 d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~----------~----------~----~~~~~~~---~~~~~ 234 (338)
T cd06502 188 DSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRR----------K----------Q----AGGGMRQ---SGFLA 234 (338)
T ss_pred CEEEEeccccCCCc------cceEEECCHHHHHHHHHHH----------H----------H----hCCChhh---HHHHH
Confidence 9998888 877654 3356777887776652100 0 0 0011111 12211
Q ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC----HHHHHHHHH---HcCceeee
Q 001990 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY---KIEMNLRV 501 (985)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~----~~~l~~~L~---~~Gi~~~~ 501 (985)
.++. ..+...+..+..++..++++++.+.|+++| +.+.+ +..+.+.+..+. ..++.+.|. ++|+.+..
T Consensus 235 -~a~~--~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 235 -AAGL--AALENDLWLRRLRHDHEMARRLAEALEELG-GLESE-VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred -HHHH--HHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEe
Confidence 1222 233344566777888999999999999987 54432 233344555442 334444443 57998876
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 502 VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 502 ~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
...+.+|++++.++|++|++++++++.
T Consensus 310 ~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 310 WGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred cCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 555899999999999999999999986
No 308
>PRK07550 hypothetical protein; Provisional
Probab=99.66 E-value=2.9e-14 Score=164.95 Aligned_cols=349 Identities=12% Similarity=0.087 Sum_probs=202.3
Q ss_pred HHHHHHHHHHhcCccCcCcccccccceecccCccccccccccc--cccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCC
Q 001990 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWP--SFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (985)
Q Consensus 571 ~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~--~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~ 648 (985)
.++.+.+.++++.+. ..+.|+.+.+.+.....+...... .-.....|.+ .+|..++.+.+.+++.+..|..
T Consensus 15 ~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 15 PEVRAWLAGYDGADG----PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHhhcCC----CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCCHHHHHHHHHHHHHHhCCC
Confidence 566666666654443 356788776655433222221100 0001122333 3577677777777777776643
Q ss_pred --ccceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHH
Q 001990 649 --SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKA 723 (985)
Q Consensus 649 --~~~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~--~g~iDle~L~~~ 723 (985)
...++.++| +++... +++.+. .++++|+++++.|..+...++..|++++.++.++ ++.+|+++++++
T Consensus 88 ~~~~~i~~t~G~~~al~~---~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~ 159 (386)
T PRK07550 88 ISPEQVHITSGCNQAFWA---AMVTLA-----GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEAL 159 (386)
T ss_pred CCcceEEEecCcHHHHHH---HHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHH
Confidence 334445445 444422 232221 3678999999888777777789999999999874 346899999999
Q ss_pred HHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccccCCCCC---C---cCCC-cEEEeCCcc
Q 001990 724 AEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---G---YIGA-DVCHLNLHK 793 (985)
Q Consensus 724 i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~~g~~~~---g---~~g~-Di~~~s~hK 793 (985)
++ +++++|++++| |++|.+.+ ++++|+++|+++|+++++|+++..-......+ . ..+. .+++.|++|
T Consensus 160 ~~---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 160 IT---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred hc---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchh
Confidence 97 67888888888 47898752 48999999999999999999874211100001 0 1111 355788889
Q ss_pred cccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHH
Q 001990 794 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (985)
Q Consensus 794 tl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~ 873 (985)
+|+.| |.++|+++++++++..+.... . ....+.+..++. ++...+..+ ++-+.+..+
T Consensus 237 ~~g~~----G~RiG~i~~~~~~~~~~~~~~-~-------------~~~~~~s~~~q~----~~~~~l~~~-~~~~~~~~~ 293 (386)
T PRK07550 237 SYALT----GHRVGAVVASPARIAEIEKFM-D-------------TVAICAPRIGQI----AVAWGLPNL-ADWRAGNRA 293 (386)
T ss_pred hccCc----ccceEeeecCHHHHHHHHHHH-h-------------hcccCCCcHHHH----HHHHHhccH-HHHHHHHHH
Confidence 88543 678999999876654432110 0 001111111111 111222211 122233344
Q ss_pred HHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCccCCC-CCC--CCCEEEEec
Q 001990 874 IAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTM-SWP--VPGTLMIEP 949 (985)
Q Consensus 874 ~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~~~~~-~~p--v~~~lris~ 949 (985)
...++.+++.+.|.+...+..... +.. .+.+.++. .+.+..+++++|. ++||.+... .|. ..+.+|+++
T Consensus 294 ~~~~~~~~l~~~L~~~~~~~~~~~-g~~--~~~~~~~~----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~ 366 (386)
T PRK07550 294 EIARRRDAFRAVFARLPGWELLAS-GAY--FAYVRHPF----PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAF 366 (386)
T ss_pred HHHHHHHHHHHHHHhCCCceeCCC-ceE--EEEecCCC----CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEe
Confidence 556667788888876312222221 211 23344331 1457889999875 579987432 121 246899999
Q ss_pred cCCCCHHhhchHHHHHHHHHHH
Q 001990 950 TESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 950 t~~~t~eeId~~~~~i~aL~~i 971 (985)
+. .++++++ +.++.|++.
T Consensus 367 ~~-~~~~~~~---~~~~~l~~~ 384 (386)
T PRK07550 367 AN-ADVAGIG---ELVERLRAF 384 (386)
T ss_pred ec-CCHHHHH---HHHHHHHhh
Confidence 64 3578888 877777653
No 309
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=1.6e-14 Score=166.89 Aligned_cols=296 Identities=18% Similarity=0.149 Sum_probs=192.8
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc----
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---- 288 (985)
..++|+.+|++.|.+. +..+.+|++|+.++++++ .. +||+||++...|..+...+....+.+|+++++++.
T Consensus 63 v~~lE~~la~leg~~~--av~~~SG~aAi~~al~al-l~--~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~ 137 (432)
T PRK06702 63 LAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNI-CS--SGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTA 137 (432)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh-cC--CCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 3457799999999876 678999999999888765 23 89999999999998888876655678999999875
Q ss_pred hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001990 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (985)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~ 365 (985)
+++++ ++++|++|++.+| |+++.+.|+++|+++||++|+++++| +.++.+.+..|.+.||||++.|. |.++++-.
T Consensus 138 ~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD-~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd- 215 (432)
T PRK06702 138 DEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVD-NTLATPYLCQAFEHGANIIVHSTTKYIDGHAS- 215 (432)
T ss_pred HHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEE-CCCCchhhCChhhcCCCEEEEccccccCCCcc-
Confidence 46666 8899999999888 78999999999999999999999995 45666777788999999999998 88875321
Q ss_pred CCCceEEEEEchhhHhcCC--CceeeeeecCCCCcceEEeccc---cc-------ccccccccCCCccchhHHHHHHHHH
Q 001990 366 GGPHAAFLATSQEYKRMMP--GRIVGVSIDSSGKPALRVAMQT---RE-------QHIRRDKATSNICTAQALLANMAAM 433 (985)
Q Consensus 366 GGP~~G~l~~~~~~~~~lp--~~~vG~s~d~~g~~~~~l~l~t---re-------~~~rre~atsni~t~~~l~a~~aa~ 433 (985)
+ -.|.+..+..+--.-. ..++ ..+... +.+.+.. |. ....|.-| .| .+++ ..
T Consensus 216 ~--l~G~v~~~~~~~w~~~~~~~l~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~-~sp~-----~a 279 (432)
T PRK06702 216 S--LGGIVIDGGNFDWTNGKYPELV----EPDPSY-HGVSYVQNFGAAAYIVKARVQLLRDYG---NC-MSPF-----NA 279 (432)
T ss_pred e--eceEEEeCCCcccccccccccc----cccccc-cccchhhccchhhHHHHHHHHHHHHcc---CC-CCHH-----HH
Confidence 1 1233332221100000 0000 000000 0000000 00 01111111 11 1222 12
Q ss_pred HHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc--CC----C--------C---c-ceEEEecCC----HHHHHHH
Q 001990 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--GL----P--------F---F-DTVKVKCAD----AHAIASA 491 (985)
Q Consensus 434 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~--~~----~--------~---~-~~~~i~~~~----~~~l~~~ 491 (985)
|+...|-+-++.+.++..+++..++++|++.+.++.+ +. + . + .-|+|.+++ +.++.+.
T Consensus 280 ~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~ 359 (432)
T PRK06702 280 YISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIAN 359 (432)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHh
Confidence 3466667778888888999999999999988645432 11 1 0 1 246777653 3344444
Q ss_pred HHHc--Ccee---ee----------------------ecCCeEEEEeccCCCHHHHHHHHHHHhCCC
Q 001990 492 AYKI--EMNL---RV----------------------VDSNTVTASFDETTTLEDVDKLFIVFAGGK 531 (985)
Q Consensus 492 L~~~--Gi~~---~~----------------------~~~~~lris~~~~~t~edid~ll~~l~~~~ 531 (985)
|.=. +..+ +. +.++.+|+|++.-+.++=++.|.++|...|
T Consensus 360 l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~Al~~~~ 426 (432)
T PRK06702 360 VKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIEDVSDIIADLEAALVGGK 426 (432)
T ss_pred CccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcCc
Confidence 4311 1111 00 113679999999887777888888887664
No 310
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.66 E-value=5.2e-14 Score=164.36 Aligned_cols=327 Identities=15% Similarity=0.110 Sum_probs=193.0
Q ss_pred ccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhC----CCc-cceecChHHHHHHHHHH
Q 001990 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG----FDS-FSLQPNAGAAGEYAGLM 666 (985)
Q Consensus 592 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G----~~~-~~~~~~sGa~g~~a~l~ 666 (985)
..||++++.+......+.......... .+. .+...++.+.+++++. .+. ..|..+||+++++++++
T Consensus 51 ~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~--------~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk 121 (425)
T PRK09264 51 LNYGHNNPVLKQALIDYLQRDGITHGL-DMH--------TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALK 121 (425)
T ss_pred ccCCCCCHHHHHHHHHHHHhccccccc-ccC--------cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHH
Confidence 468888776665544332111111111 111 1234467777887652 332 23445899999999999
Q ss_pred HHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhc---------C---cEEEEEeCCCCC---CCCHHHHHHHHHhcC--
Q 001990 667 VIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMC---------G---MKIVSVGTDAKG---NINIEELRKAAEANR-- 728 (985)
Q Consensus 667 air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~---------G---~~v~~v~~~~~g---~iDle~L~~~i~~~~-- 728 (985)
.+|.| +++.+||. ..++||....++... | ..+..+|.+... ..|++++++.+++++
T Consensus 122 lAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (425)
T PRK09264 122 LARKV------TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195 (425)
T ss_pred HHHHh------cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCC
Confidence 98876 24556664 668999876554321 1 134555553211 137889999997542
Q ss_pred -CCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCC--------cCCCcEEEeCCcccc
Q 001990 729 -DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTF 795 (985)
Q Consensus 729 -~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g--------~~g~Di~~~s~hKtl 795 (985)
+++++|+++.. +..|++.+ .+++|.++|++||+++|+|++|. + +.+.| ...+|+++++ |.+
T Consensus 196 ~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G---~GrtG~~~~~~~~~v~PDi~t~~--K~l 269 (425)
T PRK09264 196 VDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-G---CGRTGTFFSFERAGITPDIVTLS--KSI 269 (425)
T ss_pred CCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-C---CccccHHHHHhhcCCCCCEEEec--ccc
Confidence 36778877643 45676542 59999999999999999999874 2 22222 1347887663 877
Q ss_pred cccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHH-HHhchhhHHHHHHH
Q 001990 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI-AMMGSKGLTEASKI 874 (985)
Q Consensus 796 ~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l-~~lg~~gl~~~~~~ 874 (985)
+ .+|-.+|++++++++....+.. + + +++.|++..++++.+.+ ..+..++ ..++
T Consensus 270 ~----~~G~pigav~~~~~i~~~~~~~----------~----~-----~T~~gnp~~~aaa~a~l~~~~~~~~---l~~~ 323 (425)
T PRK09264 270 S----GYGLPMALVLIKPELDVWKPGE----------H----N-----GTFRGNNLAFVTATAALEEYWSDDA---FEKE 323 (425)
T ss_pred C----CCccceEEEEEchhhhccCCCc----------c----C-----CCCCCCHHHHHHHHHHHHHHHhhhH---HHHH
Confidence 3 3244468888887763221110 0 0 01223444444555666 3443333 3445
Q ss_pred HHHHHHHHHHHHhc---cCC-eeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEecc
Q 001990 875 AILNANYMAKRLEK---HYP-ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPT 950 (985)
Q Consensus 875 ~~~~a~~l~~~L~~---~~~-i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t 950 (985)
..++.++|+++|++ .++ +....+....+ +.+.+.. ......+.+.|.++|+.+..... ..+.||++|+
T Consensus 324 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~--~~i~l~~-----~~~~~~l~~~~~~~Gv~~~~~~~-~~~~lr~~p~ 395 (425)
T PRK09264 324 VKAKGELVRERLEEIAAKYPGLGAEVRGRGMM--QGIDFGD-----GELAGKIAAEAFENGLIIETSGP-EDEVVKLLPP 395 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecceecccE--EEEEecC-----hHHHHHHHHHHHHCCCEEeccCC-CCCEEEEeCC
Confidence 56677788877765 222 11111101111 2333321 12356788899999998754321 1378999999
Q ss_pred CCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 951 ESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 951 ~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
..+|++||| ++++.|.++++++.
T Consensus 396 l~~t~~ei~---~~~~~l~~~l~~~~ 418 (425)
T PRK09264 396 LTIDEEELE---EGLDILEEAVAEVL 418 (425)
T ss_pred CCCCHHHHH---HHHHHHHHHHHHHH
Confidence 999999999 99999999887754
No 311
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.66 E-value=6.3e-14 Score=156.44 Aligned_cols=294 Identities=17% Similarity=0.206 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHhCC-CccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC---------
Q 001990 633 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------- 701 (985)
Q Consensus 633 ~~~el~~~la~l~G~-~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------- 701 (985)
..-++.+.++++++. +.. -++|||++++++++..+|.| ++|++||. ...+||.+...+...|
T Consensus 94 ~Ei~~Aell~~~~p~~e~v-rfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p 166 (432)
T COG0001 94 LEVELAELLIERVPSIEKV-RFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSP 166 (432)
T ss_pred HHHHHHHHHHHhcCcccEE-EEecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCC
Confidence 344677889998876 443 46799999888887777776 57888885 6688998877654222
Q ss_pred ----c------EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEc
Q 001990 702 ----M------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (985)
Q Consensus 702 ----~------~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~ 767 (985)
+ .+..+|+| |++.+++++++.++++++|+++-. ...|++.| -+++|.++|+++|++||+|+
T Consensus 167 ~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 167 SSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred CCCCCChhhhccEEEecCC-----CHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 2 35556664 999999999988889999988753 46788863 38999999999999999998
Q ss_pred ccc---ccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCC-ccccCCCCCCCCCCCCCCCcc
Q 001990 768 ANM---NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH-PVVSTGGIPAPEKSQPLGTIA 843 (985)
Q Consensus 768 a~~---~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~-~~g~~~~~~~~~~~~~t~~i~ 843 (985)
+.. .+.+|...--...+|+.++ .|.+ | ||.-+|.+.+++++++.+.+. .+. ..
T Consensus 242 ViTGFR~~~gGaq~~~gi~PDlttl--GKiI----G-GGlP~ga~gGr~eiM~~~~p~g~vy----------------qa 298 (432)
T COG0001 242 VITGFRVALGGAQGYYGVEPDLTTL--GKII----G-GGLPIGAFGGRAEIMEQLAPLGPVY----------------QA 298 (432)
T ss_pred chhhcccCCcccccccCcCcchhhh--hhhh----c-CCcceeeeccHHHHHhhhCCCCCcc----------------cc
Confidence 752 1112211111123688654 3655 4 455688899999988765321 111 11
Q ss_pred cccchhhhHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhc-----cCCeeEcCCCCceeEEEEEEecCc--c--
Q 001990 844 AAPWGSALILPISYTYIAMMGS-KGLTEASKIAILNANYMAKRLEK-----HYPILFRGVNGTVAHEFIVDLRGL--K-- 913 (985)
Q Consensus 844 s~~~g~~~~~~~A~a~l~~lg~-~gl~~~~~~~~~~a~~l~~~L~~-----~~~i~~~g~~~~~~~~~vv~~~~~--~-- 913 (985)
+++.|+++.+++..+.+..+.. ++ ..++..+.++.|++.|++ ++....... +.. +.+-|... .
T Consensus 299 GT~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~-gsm---~~i~F~~~~~~n~ 371 (432)
T COG0001 299 GTLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAERHGIPLTVNRV-GSM---FGIFFTEEGVRNY 371 (432)
T ss_pred CCCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeee-cce---EEEEecCCCCCCH
Confidence 2233566777777777777765 33 233455666777777764 344433221 111 22222210 0
Q ss_pred ---ccCCC-CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 914 ---NTAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 914 ---~~~g~-~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
...+. ....+.+.|+++||+.+...+ ...- ++..+|++||| ++++++.++.+++.
T Consensus 372 ~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~f--lS~ahte~di~---~~~~a~~~~~~~~~ 430 (432)
T COG0001 372 ADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGF--LSTAHTEEDID---RTLEAADEAFKELA 430 (432)
T ss_pred HHHHhhchHHHHHHHHHHHhCCcccCCccc---ccee--eecccCHHHHH---HHHHHHHHHHHHhh
Confidence 00011 123556688899999864332 2333 34569999999 99999998887764
No 312
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.66 E-value=1.5e-14 Score=167.35 Aligned_cols=212 Identities=19% Similarity=0.191 Sum_probs=156.7
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch---h
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~---~ 290 (985)
.++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|++++++|.. +
T Consensus 73 ~~le~~lA~l~g~~~--al~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 147 (403)
T PRK07810 73 SMFEERLRLIEGAEA--CFATASGMSAVFTALGAL-LG--AGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQ 147 (403)
T ss_pred HHHHHHHHHHhCCCc--EEEECChHHHHHHHHHHH-hC--CCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 457789999999874 778999999988877665 23 899999999999888777776677789999999764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |.++++ |.
T Consensus 148 l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~~~~~gaDivv~S~tK~l~g~---g~ 223 (403)
T PRK07810 148 WEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLD-NVFATPLLQRGLPLGADVVVYSGTKHIDGQ---GR 223 (403)
T ss_pred HHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhcCCcEEEccCCceecCC---cC
Confidence 555 7889999999998 68999999999999999999999995 45666666667789999999998 877531 22
Q ss_pred CceEEEEEchhhHhc-CCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~~~~~~~-lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
.-.|+++++++.+.. +- ..++..|. | .+++ .|. +...+.+-+..+
T Consensus 224 ~~gG~v~~~~~~~~~~l~-------------------------~~~~~~g~---~-~s~~---~a~--l~l~~L~tl~~R 269 (403)
T PRK07810 224 VLGGAILGDREYIDGPVQ-------------------------KLMRHTGP---A-LSAF---NAW--VLLKGLETLALR 269 (403)
T ss_pred ceeEEEEeChHHHHHHHH-------------------------HHHHHhCC---C-CCHH---HHH--HHHhccCcHHHH
Confidence 224788887664431 10 00011111 0 0121 222 245556667788
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
.++..+++.+++++|++..+++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 8888999999999999875454
No 313
>PRK10534 L-threonine aldolase; Provisional
Probab=99.66 E-value=2.7e-15 Score=170.03 Aligned_cols=282 Identities=11% Similarity=0.110 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC-cHHH-HHhc-CcEEEEEeCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT-AAMC-GMKIVSVGTD 710 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~-~~~~-~~~~-G~~v~~v~~~ 710 (985)
..++++.+++++|.+... ..++|++++...+.+.. .++++|+++.+.|.. +... +... +++++.++.+
T Consensus 36 ~~~L~~~la~~~g~~~~~-v~~~g~~a~~~~l~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 36 VNALQDYAAELSGKEAAL-FLPTGTQANLVALLSHC--------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHhCCCeEE-EeCchHHHHHHHHHHhc--------CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC
Confidence 568899999999998874 45556655644443321 366888888766642 2111 2333 4788888887
Q ss_pred CCCCCCHHHHHHHHHhcC---CCeEEEEEEcCCCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-CCCCC-C--c
Q 001990 711 AKGNINIEELRKAAEANR---DNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP-G--Y 781 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~~---~~t~~Vvi~~pn~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g~~~~-g--~ 781 (985)
+++.+|+++|+++++++. .++++|++++|++ |.+. +++++|+++|+++|+++++|+|+..... ..... . .
T Consensus 107 ~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~-G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~ 185 (333)
T PRK10534 107 ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN-GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT 185 (333)
T ss_pred CCCCCCHHHHHHhhcccCcCcccceEEEEecCCC-CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH
Confidence 788999999999996210 1688999999874 8876 1356667889999999999998642110 00111 0 1
Q ss_pred CCCcEEEeCCcccccccCCCCCCcce-eeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHH
Q 001990 782 IGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (985)
Q Consensus 782 ~g~Di~~~s~hKtl~~p~g~GGPg~G-~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l 860 (985)
...|.++.+++|.|+++ +| +++.+++++..+.... .....++.. .....+++.+.+
T Consensus 186 ~~~~~~~~s~SK~~~~~-------~G~~~~~~~~~i~~~~~~~------------~~~~~~~~~----~~~~~a~~~~~l 242 (333)
T PRK10534 186 QYCDSFTICLSKGLGTP-------VGSLLVGNRDYIKRARRWR------------KMTGGGMRQ----AGILAAAGLYAL 242 (333)
T ss_pred hcCCEEEEEeEcCCCCc-------ccceEEcCHHHHHHHHHHH------------HHhCCchhh----HHHHHHHHHHHH
Confidence 13476666788987543 34 5666777665442100 000001110 011111222222
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCC
Q 001990 861 AMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (985)
Q Consensus 861 ~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~ 939 (985)
.. ..+..++..++++++.+.|++ ++++. .+ ..+.+.++++ +.+..++.+.|.++||.+...
T Consensus 243 ~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~---~~nfv~~~~~------~~~~~~~~~~l~~~gi~v~~~-- 304 (333)
T PRK10534 243 KH-----NVARLQEDHDNAAWLAEQLREAGADVM--RQ---DTNMLFVRVG------EEQAAALGEYMRERNVLINAS-- 304 (333)
T ss_pred Hh-----hHHHHHHHHHHHHHHHHHHHhCCCccC--CC---CceEEEEECC------chhHHHHHHHHHHcCeeecCC--
Confidence 21 122333445567889999987 55432 11 1233445543 124678889999999998532
Q ss_pred CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 940 PVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 940 pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
..+|++.+..+|+||++ ++++.|++.+
T Consensus 305 ---~~~rl~~~~r~t~e~~~---~~~~~l~~~~ 331 (333)
T PRK10534 305 ---PIVRLVTHLDVSREQLA---EVVAHWRAFL 331 (333)
T ss_pred ---ceEEEEEEeCCCHHHHH---HHHHHHHHHh
Confidence 25788877678999999 9999998654
No 314
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=4.4e-14 Score=164.30 Aligned_cols=144 Identities=16% Similarity=0.129 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~ 708 (985)
...++++.+|++.|.+.+ +.++||+.|+..++.++ . .++|+||++...|+..... +...|+++++++
T Consensus 65 ~~~~le~~lA~l~g~~~a-v~~sSGt~Al~~al~~l---l-----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 65 TVAVLEERVAALEGGVGA-IATASGQAALHLAIATL---M-----GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred HHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 467899999999998775 66778887764444433 1 3678999988867544332 345899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
++ |+++++++|+ ++|++|++++| |++|.+. |+++|+++||++|++++||++|+.+.. ..|-++|+|++
T Consensus 136 ~~-----d~~~l~~~i~---~~TklV~~e~~~np~g~v~-Di~~I~~la~~~gi~livD~t~a~~~~--~~pl~~GaD~v 204 (433)
T PRK08134 136 PG-----DIDGWRAAIR---PNTRLLFGETLGNPGLEVL-DIPTVAAIAHEAGVPLLVDSTFTTPYL--LRPFEHGADLV 204 (433)
T ss_pred CC-----CHHHHHHhcC---CCCeEEEEECCCcccCccc-CHHHHHHHHHHcCCEEEEECCCccccc--CCchhcCCCEE
Confidence 74 8999999998 89999999988 5789998 999999999999999999999865543 34667899999
Q ss_pred EeCCccccc
Q 001990 788 HLNLHKTFC 796 (985)
Q Consensus 788 ~~s~hKtl~ 796 (985)
++|+||+++
T Consensus 205 v~S~tK~l~ 213 (433)
T PRK08134 205 YHSATKFLG 213 (433)
T ss_pred EeccccccC
Confidence 999999984
No 315
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.65 E-value=1.3e-14 Score=170.17 Aligned_cols=294 Identities=14% Similarity=0.145 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHh-------------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAM------------- 699 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~------------- 699 (985)
..++.++|++.+..-...++.+||++++++++..+|.| +++++||. ...+||.+......
T Consensus 141 ~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~ 214 (474)
T PLN02482 141 ENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDS 214 (474)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCCC
Confidence 44678888888743223467899999999999888876 35567775 66789965332111
Q ss_pred cCc------EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccc
Q 001990 700 CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGAN 769 (985)
Q Consensus 700 ~G~------~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~ 769 (985)
.|+ .+..+|. .|++++++.++++.+++++|+++.. +..|.+.++ +++|.++|++||+++|+|+++
T Consensus 215 ~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~ 289 (474)
T PLN02482 215 PGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM 289 (474)
T ss_pred CCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 111 1233333 3899999999876667888877643 456777532 779999999999999999987
Q ss_pred cccc-cCC-CCCCcC--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccc
Q 001990 770 MNAQ-VGL-TSPGYI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (985)
Q Consensus 770 ~~~~-~g~-~~~g~~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~ 845 (985)
. ++ .+. .....+ .+|++++ .|.+ ++|-| +|.+++++++++.+... +. ....++
T Consensus 290 t-GfR~g~~ga~~~~gv~PDi~t~--gK~l----ggG~P-igav~g~~ei~~~~~~~--~~-------------~~~~~T 346 (474)
T PLN02482 290 T-GFRIAYGGAQEYFGITPDLTTL--GKVI----GGGLP-VGAYGGRREIMEMVAPA--GP-------------MYQAGT 346 (474)
T ss_pred c-CeecCcchHhHHhCCCCCEEEe--cchh----hCCCc-eEEEEEcHHHHHhhccC--CC-------------cccccC
Confidence 3 32 110 000112 3688765 3776 33445 55667888877655310 00 001123
Q ss_pred cchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc-----CCeeEcCCCCceeEEEEEEecCcc---ccCC
Q 001990 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDLRGLK---NTAG 917 (985)
Q Consensus 846 ~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~-----~~i~~~g~~~~~~~~~vv~~~~~~---~~~g 917 (985)
+.|++..++++.+.|..+..+++ .++...+.++|+++|++. +.+...+. ...+. +.+..++.. ....
T Consensus 347 ~~gnpl~~aAala~L~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v-~g~~g-i~f~~~~~~~~~~~~~ 421 (474)
T PLN02482 347 LSGNPLAMTAGIHTLKRLQQPGT---YEYLDKITKKLIQGILEAGKKAGHEMCGGYI-SGMFG-FFFTEGPVYNFADAKK 421 (474)
T ss_pred cchhHHHHHHHHHHHHHHhccCH---HHHHHHHHHHHHHHHHHHHHhcCCCEEEccc-ceEEE-EEEecCCccChhhhcc
Confidence 44567777778888888866543 456667788898888762 22221111 11111 111110000 0000
Q ss_pred CC---HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 918 IE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 918 ~~---~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+ ...+.+.|.++|+++....++. ..|+..+|++||| ++++++.+++.+
T Consensus 422 ~d~~~~~~~~~~l~~~Gv~~~~~~~~~-----~~psl~ht~~dId---~~l~al~~~l~~ 473 (474)
T PLN02482 422 SDTAKFARFHRGMLEEGVYLAPSQFEA-----GFTSLAHTEEDID---FTIAAAERVLAR 473 (474)
T ss_pred CCHHHHHHHHHHHHHCCeEEeccCCCC-----CcCCCCCCHHHHH---HHHHHHHHHHHh
Confidence 11 3467888899999975443321 1377889999999 999999998764
No 316
>PRK08068 transaminase; Reviewed
Probab=99.65 E-value=2.4e-14 Score=165.87 Aligned_cols=287 Identities=12% Similarity=0.078 Sum_probs=174.2
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Ccc-ceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~-~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|. +.. .+.. +++.++... +++.+. .+++.|+++++.|+.+...++..|++
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~---~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~ 141 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE---LPQCLM-----NPGDTILVPDPGYPDYLSGVALARAQ 141 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH---HHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 56656555556665555574 333 4444 444444422 233221 36789999999888888888899999
Q ss_pred EEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccc-cccC--
Q 001990 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG-- 775 (985)
Q Consensus 704 v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~-~~~g-- 775 (985)
++.+|.+++ ..+|++++++.++ +++++|++++| |++|.+-+ .+++|.++|+++|+++++|+++.. ...+
T Consensus 142 ~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 142 FETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred EEEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 999999753 4689999999886 67899999999 58999862 367888899999999999998732 1111
Q ss_pred CCC----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 776 LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 776 ~~~----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
... .+.....+++.|+.|+|+. .|.++|+++.+++++..+.... ....++. .+.
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~----~GlRiG~~~~~~~l~~~l~~~~--------------~~~~~~~----~~~ 276 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNM----AGWRVAFAVGNESVIEAINLLQ--------------DHLFVSL----FGA 276 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCC----ccceeEeEecCHHHHHHHHHHH--------------hhccCCC----ChH
Confidence 000 1111223677788888854 4788999998887765442100 0001111 001
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH-
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD- 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e- 929 (985)
...++..++. -+.+-+++..+...++.+++.+.|++ ++.+. .+.+.+ .+.++++ .+.+..++.+.|.+
T Consensus 277 ~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~--~~~g~~--~~~v~~~-----~~~~~~~~~~~l~~~ 346 (389)
T PRK08068 277 IQDAAIEALL-SDQSCVAELVARYESRRNAFISACREIGWEVD--APKGSF--FAWMPVP-----KGYTSEQFADLLLEK 346 (389)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeeE--EEEEECC-----CCCCHHHHHHHHHHh
Confidence 1111112221 12233455556667778888888877 44321 221211 1234554 13577899999986
Q ss_pred CCCccCCC-CCC--CCCEEEEeccCCCCHHhhc
Q 001990 930 YGFHGPTM-SWP--VPGTLMIEPTESESKVCHN 959 (985)
Q Consensus 930 ~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId 959 (985)
+||.+... .|+ ..+.+||++. ..++.+.
T Consensus 347 ~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~ 377 (389)
T PRK08068 347 AHVAVAPGNGFGEHGEGYVRVGLL--TDEERLR 377 (389)
T ss_pred CCEEEecchHhCccCCCeEEEEEc--CCHHHHH
Confidence 69987432 222 2478999995 3444444
No 317
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.65 E-value=2e-14 Score=154.43 Aligned_cols=140 Identities=25% Similarity=0.269 Sum_probs=115.9
Q ss_pred HHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch---hhh
Q 001990 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DID 292 (985)
Q Consensus 216 ~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~---~l~ 292 (985)
+|+.||.|.|.-. +.-+.+|.++...+++.+. +.||+||.+...+..+...+....+.+|++++++|.+ .++
T Consensus 67 lE~RiAaLEGG~a--a~a~aSG~AA~~~ai~~la---~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 67 LEERIAALEGGVA--ALAVASGQAAITYAILNLA---GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred HHHHHHHhhcchh--hhhhccchHHHHHHHHHhc---cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 5689999998644 3345577766655554432 3899999999999988888876678899999999764 455
Q ss_pred c-cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001990 293 Y-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (985)
Q Consensus 293 ~-l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~ 361 (985)
+ ++++|++|+++. .|+-+.|.|+++|+++||++|++++|+ +.++.+.+..|-+.|||||+.|. |++|+
T Consensus 142 ~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVD-NT~atpyl~rP~~hGADIVvHS~TK~igG 212 (426)
T COG2873 142 AAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVD-NTFATPYLCRPIEHGADIVVHSATKYIGG 212 (426)
T ss_pred HHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEe-cCCCcceecchhhcCCCEEEEeecccccC
Confidence 6 899999999975 699999999999999999999999994 67787888899999999999998 88875
No 318
>PLN02242 methionine gamma-lyase
Probab=99.65 E-value=9e-15 Score=169.63 Aligned_cols=220 Identities=18% Similarity=0.208 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH-----HhcCcEEEEE
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-----AMCGMKIVSV 707 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~-----~~~G~~v~~v 707 (985)
...++++.+++++|.+.+ +.+++|+.++.+++.++. .++|+||++...++.+...+ +..|++++.+
T Consensus 77 t~~~LE~~lA~l~g~~~~-l~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~ 147 (418)
T PLN02242 77 TVLNLGRQMAALEGTEAA-YCTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV 147 (418)
T ss_pred hHHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence 366899999999999876 456778777655554432 46789999887665554433 3478888877
Q ss_pred eCCCCCCCCHHHHHHHHHhcCC-CeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCc
Q 001990 708 GTDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (985)
Q Consensus 708 ~~~~~g~iDle~L~~~i~~~~~-~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~D 785 (985)
+.+ |+++++++++ + ++++|++++| |++|.+. |+++|+++||++|+++++|.++.. . ...+..+|+|
T Consensus 148 d~~-----d~e~l~~~i~---~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~gi~livDea~~~--~-~~~~~~~g~d 215 (418)
T PLN02242 148 DIT-----DLEAVKKAVV---PGKTKVLYFESISNPTLTVA-DIPELARIAHEKGVTVVVDNTFAP--M-VLSPARLGAD 215 (418)
T ss_pred CCC-----CHHHHHHhcC---cCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhCCEEEEECCCCc--c-CCCHHHcCCc
Confidence 653 8999999997 5 5999999999 6799998 899999999999999999998842 1 2345567899
Q ss_pred EEEeCCcccccccCCCCCC-cceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 786 VCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
+++.|++|+|+. +|. .+|+++++++++..+.....+ +....+. ......||. ...+
T Consensus 216 ivv~S~SK~l~g----~g~~~gG~iv~~~~li~~l~~~~~~---------~~~~~g~--------~~~~~~A~l--~~~~ 272 (418)
T PLN02242 216 VVVHSISKFISG----GADIIAGAVCGPAELVNSMMDLHHG---------ALMLLGP--------TMNPKVAFE--LSER 272 (418)
T ss_pred EEEEeCccccCC----CCCceEEEEEcCHHHHHHHHHHhhh---------hhhccCC--------CCCHHHHHH--HHcC
Confidence 999999999853 232 368888887765443211000 0000011 111122333 3344
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcC
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRG 896 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g 896 (985)
...+..+.++..++++++.+.|++ ++.+.+++
T Consensus 273 l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~ 305 (418)
T PLN02242 273 LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPG 305 (418)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence 445566667888999999999987 55565554
No 319
>PRK07483 hypothetical protein; Provisional
Probab=99.65 E-value=7e-14 Score=163.56 Aligned_cols=312 Identities=15% Similarity=0.135 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHhC--CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G--~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
..++.+.|++++. .+ ..++.+||+++++++++.+|.|...+|.+++.+||. ...+||....+....|-
T Consensus 75 ~~~lae~L~~~~p~~~~-~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 153 (443)
T PRK07483 75 AEALADRLVAAAPAGLE-HVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFA 153 (443)
T ss_pred HHHHHHHHHHhCCCCCC-EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccC
Confidence 4478888888874 33 347789999999999999998865555444567775 67899987655432221
Q ss_pred ----EEEEEeCCCCCC-C------------CHHHHHHHHHh-cCCCeEEEEEEcCC--Ccccccc---CHHHHHHHHHHc
Q 001990 703 ----KIVSVGTDAKGN-I------------NIEELRKAAEA-NRDNLSTLMVTYPS--THGVYEE---GIDEICKIIHDN 759 (985)
Q Consensus 703 ----~v~~v~~~~~g~-i------------Dle~L~~~i~~-~~~~t~~Vvi~~pn--~~G~i~~---di~eI~~la~~~ 759 (985)
.+..++...... . .++++++++.+ +.+++++|+++-.. ..|.+.+ -+++|.++|++|
T Consensus 154 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~ 233 (443)
T PRK07483 154 PLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY 233 (443)
T ss_pred CCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh
Confidence 122333211011 0 13567776643 34678888887432 2466653 299999999999
Q ss_pred CCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCC
Q 001990 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (985)
Q Consensus 760 g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~ 831 (985)
|+++|+|+++ .|+.+.|++ .+|++++ .|.++ +|--.+|.+++++++.+.+.... +
T Consensus 234 gillI~DEV~----tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~----gG~~Pi~av~~~~~i~~~~~~~~-~------ 296 (443)
T PRK07483 234 GVLLILDEVM----CGMGRTGTLFACEEDGVAPDLVTI--AKGLG----AGYQPIGAVLASDRIYDAIADGS-G------ 296 (443)
T ss_pred CCEEEEecce----eCcccCcHHHHHhhcCCCCCeeee--hhhhc----cCccccEEEEEcHHHHHHHhcCC-C------
Confidence 9999999986 344455432 3799876 37763 33213677778877765443110 0
Q ss_pred CCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCee--EcCCCCceeEEEE
Q 001990 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPIL--FRGVNGTVAHEFI 906 (985)
Q Consensus 832 ~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~--~~g~~~~~~~~~v 906 (985)
. ....+++.|+++.++++.+.|..+.++++. ++..+..++|+++|++ .++++ ..|. + .+..+-
T Consensus 297 ------~-~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~-G-lm~gie 364 (443)
T PRK07483 297 ------F-FQHGHTYLGHATACAAALAVQRVIAEDGLL---ANVRARGEQLRARLRERLGQHPHVGDIRGR-G-LFVGVE 364 (443)
T ss_pred ------c-cccCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHhcCCCeeeEeec-c-cEEEEE
Confidence 0 001123445777788888888888776544 4566777888888864 22221 1221 1 111111
Q ss_pred EEecC-cccc--CC-CCHHHHHHHHHHCCCccCCCCC----CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 907 VDLRG-LKNT--AG-IEPEDVAKRLMDYGFHGPTMSW----PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 907 v~~~~-~~~~--~g-~~~~~l~~~L~e~Gi~~~~~~~----pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
+.-+. .+.. .. .....+.+.+.++|+++..... +.++.||++|....|++||| +++++|.+++.++..+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid---~~~~~l~~~l~~~~~~ 441 (443)
T PRK07483 365 LVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID---EIVERLGDAIDAALAA 441 (443)
T ss_pred EeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHH---HHHHHHHHHHHHHHhh
Confidence 11110 0000 00 0134678888999998742211 12368999999999999999 9999999999876543
No 320
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.65 E-value=4.8e-14 Score=163.73 Aligned_cols=328 Identities=12% Similarity=0.084 Sum_probs=191.3
Q ss_pred cccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCC---cc-ceecChHH-HHHHHHH
Q 001990 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGA-AGEYAGL 665 (985)
Q Consensus 591 ~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~---~~-~~~~~sGa-~g~~a~l 665 (985)
++.|+.+.+++++.................|.+ .+|..++.+.+.+++.+.+|.+ .. .+..++|+ ++..
T Consensus 31 ~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~--- 104 (396)
T PRK09147 31 PISLSIGEPKHPTPAFIKDALAANLDGLASYPT---TAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALF--- 104 (396)
T ss_pred eEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCC---CCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHH---
Confidence 566777766655432222210000011122322 3566666666777777676854 33 45554454 4432
Q ss_pred HHHHHHHHhcCCCC---CCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-
Q 001990 666 MVIRAYHKARGDHH---RNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP- 739 (985)
Q Consensus 666 ~air~~~~~~g~~~---~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p- 739 (985)
.+++.+. .+ +++|+++.+.+..+...++..|++++.+|.+++ +.+|++++++.+. +++++|++++|
T Consensus 105 ~~~~~l~-----~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~ 176 (396)
T PRK09147 105 AFAQTVI-----DRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFVCSPG 176 (396)
T ss_pred HHHHHHc-----CCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh---hccEEEEEcCCC
Confidence 2333221 24 678999998777777778889999999998643 4799999998886 68899999999
Q ss_pred CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cCC-CCC------CcCCC---c--EEEeCCcccccccCCCCCC
Q 001990 740 STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSP------GYIGA---D--VCHLNLHKTFCIPHGGGGP 804 (985)
Q Consensus 740 n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g~-~~~------g~~g~---D--i~~~s~hKtl~~p~g~GGP 804 (985)
|++|.+- ..+++|+++|+++++++++|.++..-. .+- ..+ ...+. | +++.|+.|.|+. .|.
T Consensus 177 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~----~Gl 252 (396)
T PRK09147 177 NPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNV----PGL 252 (396)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCC----ccc
Confidence 5799886 258899999999999999999874321 110 000 01122 2 677888887754 478
Q ss_pred cceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 001990 805 GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAK 884 (985)
Q Consensus 805 g~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~ 884 (985)
++|++++++++.+.+.... .....+++ ...+. ++.+.+ ...+-+.+..+...++.+.+.+
T Consensus 253 RiG~~~~~~~l~~~~~~~~------------~~~~~~~~--~~~q~----a~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 312 (396)
T PRK09147 253 RSGFVAGDAALLKKFLLYR------------TYHGCAMP--PAVQA----ASIAAW--NDEAHVRENRALYREKFDAVTP 312 (396)
T ss_pred eeeeecCCHHHHHHHHHHh------------hhcccCCC--HHHHH----HHHHHh--cchhHHHHHHHHHHHHHHHHHH
Confidence 9999999877665432100 00001111 11111 111111 1122344445555666777778
Q ss_pred HHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCccCCC-CC--------CCCCEEEEeccCCCC
Q 001990 885 RLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTM-SW--------PVPGTLMIEPTESES 954 (985)
Q Consensus 885 ~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~~~~~-~~--------pv~~~lris~t~~~t 954 (985)
.|++.+.+. .+.+.. .+.++++ .+..++++.|. ++||.+... .| +..+++|++++. +
T Consensus 313 ~L~~~~~~~--~p~~g~--f~~~~~~-------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~ 379 (396)
T PRK09147 313 ILAPVLDVQ--LPDAGF--YLWAKVP-------GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--P 379 (396)
T ss_pred HHHHhcCCC--CCCeeE--EEEEECC-------CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--C
Confidence 887643322 121222 2345543 34577888875 679976321 11 124789999874 5
Q ss_pred HHhhchHHHHHHHHHHHH
Q 001990 955 KVCHNREDLFFQILLSLT 972 (985)
Q Consensus 955 ~eeId~~~~~i~aL~~i~ 972 (985)
+++++ +.++.|++.+
T Consensus 380 ~~~l~---~~l~rl~~~~ 394 (396)
T PRK09147 380 LAECV---EAAERIVDFC 394 (396)
T ss_pred HHHHH---HHHHHHHHHh
Confidence 67777 7777776654
No 321
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.65 E-value=8.9e-15 Score=168.71 Aligned_cols=284 Identities=14% Similarity=0.066 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH----HhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~----~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.. +.+++|+.++.+++.++. .++++||++...|+...... ...|+++..++.
T Consensus 63 ~~~Le~~lA~l~G~~~a-l~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 63 VKLFEERMAVLEGGEEA-LAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred hHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 45789999999998754 566777766544433331 46789999887776543332 345777777665
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...|-..|+|+++
T Consensus 134 -----~d~~~l~~~i~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~g~~vivD~a~a~~~--~~~pl~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR---PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNGLLVIVDNTFCSPY--LQRPLELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC---cCceEEEEeCCCCCCceec-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhcCCcEEE
Confidence 38999999997 78999999999 5799998 89999999999999999999985332 2345567899999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|++|+|+.+ |.+.+|+++++++.+..+..... ...+...+ + ..+|..+..+ +.+
T Consensus 203 ~S~sK~l~g~---g~~~gG~v~~~~~~i~~~~~~~~------------~~~g~~~~-----~---~~a~l~~~~L--~tl 257 (386)
T PRK06767 203 HSATKYIGGH---GDVVAGVTICKTRALAEKIRPMR------------KDIGGIMA-----P---FDAWLLLRGL--KTL 257 (386)
T ss_pred ecCcceecCC---CCceeEEEEeChHHHHHHHHHHH------------HHhCCCCC-----H---HHHHHHHcCC--CcH
Confidence 9999998521 22336889888765433211000 00011111 1 1133333333 334
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--CCe-eEcCCC------CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC--C-
Q 001990 869 TEASKIAILNANYMAKRLEKH--YPI-LFRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP--T- 936 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~~--~~i-~~~g~~------~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~--~- 936 (985)
..+.++..+++.++++.|++. +.. .++..+ ......+.|+++. ...+..++.++|...++.++ .
T Consensus 258 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~----~~~~~~~f~~~l~~~~~~~s~G~~ 333 (386)
T PRK06767 258 AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG----GKEETQAFINDLHFITIAVSLGDT 333 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC----CHHHHHHHHHhCCccEEecCCCCc
Confidence 556677789999999999873 332 222100 0011234455431 01245677777776655432 1
Q ss_pred ---CCCC-----------------C-CCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 937 ---MSWP-----------------V-PGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 937 ---~~~p-----------------v-~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+..| + ++.||+|++. ||.| .+++.|.+.+.
T Consensus 334 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~---dl~~dl~~al~ 384 (386)
T PRK06767 334 ETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWE---DIVSDLEQALK 384 (386)
T ss_pred CccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHH---HHHHHHHHHHh
Confidence 1111 1 3679999875 4455 66666666554
No 322
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=2.9e-14 Score=165.60 Aligned_cols=292 Identities=20% Similarity=0.176 Sum_probs=186.3
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeC-c---hh
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L---KD 290 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~-~---~~ 290 (985)
++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||++...|..+...+...++..|+++++++ . ++
T Consensus 73 ~Le~~lA~l~g~~~--av~~sSG~aAi~~al~al-l~--~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 73 VVEQRIAALEGGVA--ALLLASGQAAETFAILNL-AG--AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHH-hC--CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 57789999999887 678899999988887765 23 8899999999999888777665667899999985 3 34
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+.+..|.++|+|+++.|+ |.++++ |+
T Consensus 148 l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD-~t~a~~~~~~pl~~GaDivv~S~tK~lgg~---G~ 223 (436)
T PRK07812 148 WRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVD-NTIATPYLIRPLEHGADIVVHSATKYLGGH---GT 223 (436)
T ss_pred HHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEEecccccCCC---CC
Confidence 555 7889999999988 78999999999999999999999995 35566666778889999999998 776532 22
Q ss_pred CceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEe-ccc--ccc-------cccccccCCCccchhHHHHHHHHHHHH
Q 001990 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVA-MQT--REQ-------HIRRDKATSNICTAQALLANMAAMYAV 436 (985)
Q Consensus 368 P~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~-l~t--re~-------~~rre~atsni~t~~~l~a~~aa~y~~ 436 (985)
.+|.+++. ..+...-+ ....+... .+.|... +.. ++. ..++.-|. ..++ -..|+.
T Consensus 224 -~i~G~vv~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~----~l~p-----~~a~l~ 289 (436)
T PRK07812 224 -AIAGVIVDGGTFDWTQG-RFPGFTTP---DPSYHGVVFAELGPPAYALKARVQLLRDLGS----AISP-----FNAFLI 289 (436)
T ss_pred -eEEEEEEcCCccccccc-cccccccC---CcccccchhhhcchhHHHHHHHHHHHHhcCC----CCCH-----HHHHHH
Confidence 23444443 22110001 11121111 0101000 000 000 00111110 0011 122456
Q ss_pred HcCcchHHHHHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----CC-----------c-ceEEEecCC----HHHHHHHHHH
Q 001990 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE-VQ-GL----PF-----------F-DTVKVKCAD----AHAIASAAYK 494 (985)
Q Consensus 437 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~~-----------~-~~~~i~~~~----~~~l~~~L~~ 494 (985)
..|-+.|..+.++..++|..|++.|+++++++ |. +. +. + .-|+|.+.+ +.++.+.|.=
T Consensus 290 ~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l 369 (436)
T PRK07812 290 AQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTL 369 (436)
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCc
Confidence 67777788888888999999999999986454 22 11 10 1 247777644 3344444431
Q ss_pred cCc--eee---------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 495 IEM--NLR---------------V----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 495 ~Gi--~~~---------------~----------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
..+ .+. . +.++.||+|++.-+-++-|+.|.++|..
T Consensus 370 ~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGlEd~~dli~dl~~Al~~ 431 (436)
T PRK07812 370 HSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGIEGIDDILADLEAGFAA 431 (436)
T ss_pred ceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 111 110 0 1246799999987766666777777764
No 323
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=3.7e-14 Score=163.59 Aligned_cols=279 Identities=16% Similarity=0.195 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCcHHHHHhcCc--------
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~-~~~Hg~~~~~~~~~G~-------- 702 (985)
+...++.+++++.++.+. .++++||++++++++..++.| .++++||+. ..+||.........|.
T Consensus 71 ~~~~~la~~l~~~~~~~~-~~~~~sG~~a~~~A~~~a~~~------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~ 143 (377)
T PRK02936 71 SLQEEVASLLAENSAGDL-VFFCNSGAEANEAALKLARKH------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFG 143 (377)
T ss_pred HHHHHHHHHHHhcCCCCE-EEEeCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCCcHHhhhccCCccccccCC
Confidence 355677788888776553 467889999998888876654 244556664 5788877655443332
Q ss_pred ----EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEcccccccc
Q 001990 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 774 (985)
Q Consensus 703 ----~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~ 774 (985)
.+..+|. .|++++++.++ +++++|+++.+ +..|.+.+ ++++|.++|++||+++++|++|. +++
T Consensus 144 ~~~~~~~~~~~-----~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g 214 (377)
T PRK02936 144 PLLPGFTHVPF-----NDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIG 214 (377)
T ss_pred CCCCCceEeCC-----CCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCC
Confidence 1223333 28999999987 78999988776 34566532 39999999999999999999983 322
Q ss_pred CCCCC---CcC--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 775 GLTSP---GYI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 775 g~~~~---g~~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
--..+ ..+ ..|+++ +.|+|+ +|..+|++++++++.+.+.... + +.... ++
T Consensus 215 ~~g~~~~~~~~~~~~di~t--~sK~l~-----~G~~ig~v~~~~~~~~~~~~~~---------~-----~~t~~----~~ 269 (377)
T PRK02936 215 RTGTLFAYEQFGLDPDIVT--VAKGLG-----NGIPVGAMIGKKELGTAFGPGS---------H-----GSTFG----GN 269 (377)
T ss_pred cCchhhHHHhhCCCCcEEE--Eccccc-----CCCccEEEEEcHHHHhhccCCC---------C-----CCCCC----CC
Confidence 11111 112 357765 358774 3455788888887766543210 0 01111 23
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeE--cCCCCceeEEEEEEecCccccCCCCHHHHH
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~~--~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~ 924 (985)
+..++++.+.|..+..+. ..++..++.+++++.|++. +.... .+ .+ . .+.+++. .+...+.
T Consensus 270 ~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g-~--~~~i~~~-------~~~~~~~ 335 (377)
T PRK02936 270 PLAMAAAKEVLQVIKQPS---FLEEVQEKGEYFLQKLQEELEHLECVKNIRG-KG-L--MIGIECT-------EEVAPVI 335 (377)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cc-e--EEEEEec-------chHHHHH
Confidence 344455556666553222 3345566778888887652 33221 11 11 1 2334443 1367788
Q ss_pred HHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 925 ~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
+.|.++|+.+.... .+.+|++|+..+|++||+ ++++.|+++
T Consensus 336 ~~l~~~gv~v~~~g---~~~lRi~p~~~~~~~~i~---~~i~~l~~~ 376 (377)
T PRK02936 336 EQLREEGLLVLSAG---PNVIRLLPPLVVTKEELD---QAVYLLKKV 376 (377)
T ss_pred HHHHHCCeEEecCC---CCEEEEECCcccCHHHHH---HHHHHHHHh
Confidence 99999999874322 378999999999999999 999988764
No 324
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=5.8e-14 Score=162.12 Aligned_cols=274 Identities=19% Similarity=0.179 Sum_probs=185.4
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|++.|.+. +.++.+|++++.+++.++ .. +||+||++...|+++...++.+++..|+++++++. +
T Consensus 66 ~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~al-l~--~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e 140 (398)
T PRK08249 66 VQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTF-LK--PGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHE 140 (398)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHh-cC--CCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHH
Confidence 4567899999999865 678888988877776654 23 88999999999999988887667778999998764 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|..+|+|++++|. |.++++ |
T Consensus 141 ~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~~~Divv~S~sK~l~g~---~ 216 (398)
T PRK08249 141 QIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVD-NTFATPINQNPLALGADLVIHSATKFLSGH---A 216 (398)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCcCccccCCchhhCCCEEeccCceecCCC---C
Confidence 5666 7889999999988 78999999999999999999999995 34454444456678999999998 877643 1
Q ss_pred CCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 367 GP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
.-..|+++.++++.+++.. .++..+ ++.+++ .+ ++...+.+-+...
T Consensus 217 ~~~gG~vv~~~~l~~~l~~-------------------------~~~~~g----~~~s~~---~a--~l~l~~l~tL~~R 262 (398)
T PRK08249 217 DALGGVVCGSKELMEQVYH-------------------------YREING----ATMDPM---SA--YLILRGMKTLKLR 262 (398)
T ss_pred CceEEEEECCHHHHHHHHH-------------------------HHHhcC----CCCCHH---HH--HHHHhCcchHHHH
Confidence 1124777777666655410 001111 011222 11 1234455666777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHH--cCceee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~----~~~l~~~L~~--~Gi~~~--- 500 (985)
.++..+++..+.++|++.+.++ |. +. | +..-|+|.+++ +.++.+.|.= .+..+.
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 342 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVE 342 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCC
Confidence 7888899999999999875454 32 11 1 11246676654 3334444321 122110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 ------------~----------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +.++.+|+|++.-+.++-|+.|.++|..
T Consensus 343 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 343 TIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 0 1136799999988776667777777763
No 325
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.65 E-value=6.8e-14 Score=161.61 Aligned_cols=277 Identities=17% Similarity=0.195 Sum_probs=178.7
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
..+|......++++.+++++|.+. ..++.+|+.+..+++.++ . ++||+|++++..|+++...++. .|.+++
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~~--~i~~~~g~~~~~~~l~~~-~--~~gd~V~~~~~~~~~~~~~~~~----~g~~~~ 148 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAER--ALLFSSGYAANLAVLTAL-A--GKGDLIVSDKLNHASLIDGARL----SRARVR 148 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-C--CCCCEEEEeCccCHHHHHHHHh----cCCceE
Confidence 344555667778899999999643 456666766655544333 2 3889999999999999887642 466666
Q ss_pred EeC---chhhhc-cCC---CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC----------CCc
Q 001990 285 VSD---LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGE 346 (985)
Q Consensus 285 ~~~---~~~l~~-l~~---~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~----------p~~ 346 (985)
.++ ++++++ +.+ +++++++.++ |.+|.+.|+++|+++||++|+++++| +..+.|.+.. ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D-e~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD-EAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccccCCCCCchHHhhCCCC
Confidence 664 456665 433 3555665555 67899999999999999999999994 3334332211 111
Q ss_pred ccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhH
Q 001990 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (985)
Q Consensus 347 ~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~ 425 (985)
..-+|+++|. |+|+. +| |++..++++.+.+-. ...+ +.. . .-+++..
T Consensus 228 ~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~---------~~~~-~~~-------------~--~~~~~~~ 275 (385)
T PRK05958 228 EPDVILVGTLGKALGS------SG-AAVLGSETLIDYLIN---------RARP-FIF-------------T--TALPPAQ 275 (385)
T ss_pred CCceEEEEechhhccc------CC-cEEEcCHHHHHHHHH---------hCcc-cee-------------c--CCCCHHH
Confidence 2334777776 88753 22 677777766554310 0000 100 0 0011122
Q ss_pred HHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee
Q 001990 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (985)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~ 502 (985)
..+..+++ ..+.. . +++.++..++.+++.+.|+++| +++... ...-+.+..++ +.++.++|.++||.+...
T Consensus 276 ~aa~~aal--~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 276 AAAARAAL--RILRR-E-PERRERLAALIARLRAGLRALG-FQLMDS-QSAIQPLIVGDNERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHHHH--HHHhc-C-HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCceEecc
Confidence 22233333 33322 2 5678889999999999999887 776532 22234455543 678999999999988532
Q ss_pred -----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 -----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 -----~--~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. .+.+|++++.+++++|++++++.|..
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 1 35799999999999999999999864
No 326
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=3.6e-14 Score=166.53 Aligned_cols=294 Identities=16% Similarity=0.153 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC--------
Q 001990 633 MFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG-------- 701 (985)
Q Consensus 633 ~~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G-------- 701 (985)
...++.++|+++++.. ...++.+||++++++++..+|.| .++++||. ...+||....++...+
T Consensus 100 ~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~ 173 (443)
T PRK06058 100 GYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSY------TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSG 173 (443)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEECCCcCcChHHHHhhcCCCcccccc
Confidence 3557888898887533 23577899999999999988876 24466775 5578998766554322
Q ss_pred c-----EEEEEeCCCCCC------CC--------HHHHHHHHHhcCCCeEEEEEEcCC-Ccccccc---CHHHHHHHHHH
Q 001990 702 M-----KIVSVGTDAKGN------IN--------IEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHD 758 (985)
Q Consensus 702 ~-----~v~~v~~~~~g~------iD--------le~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~---di~eI~~la~~ 758 (985)
+ .+..+|...... .+ ++.+++.+. .+++++|+++-.. ..|++.+ .+++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~ 251 (443)
T PRK06058 174 FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRE 251 (443)
T ss_pred cCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 1 122233211000 11 222333332 3678888765323 4566642 29999999999
Q ss_pred cCCEEEEEccccccccCCCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCC
Q 001990 759 NGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (985)
Q Consensus 759 ~g~lliVD~a~~~~~~g~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~ 830 (985)
||+++|+|+++. |+.+.|. .-+|+++++ |.++ ||..+|.+++++++++.+.....
T Consensus 252 ~gillI~DEV~t----GfgRtG~~fa~~~~gv~PDiv~~g--K~l~-----~G~Pi~av~~~~~i~~~~~~~~~------ 314 (443)
T PRK06058 252 NGVVFIADEVQT----GFARTGAWFACEHEGIVPDLITTA--KGIA-----GGLPLSAVTGRAEIMDAPHPGGL------ 314 (443)
T ss_pred cCCEEEEecccc----CCCcChhhhHHHhcCCCCCEEEEc--cccc-----CCCccEEEEEcHHHHhhccCCCC------
Confidence 999999999873 3333332 236988773 7773 34557888888887665432110
Q ss_pred CCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEE
Q 001990 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEF 905 (985)
Q Consensus 831 ~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~ 905 (985)
.+++.|++..++++.+.|..+.++++. ++..+..++|.++|++. ++++ ..|. +.. +
T Consensus 315 ------------~~T~~gnpl~~aaa~a~L~~~~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G~~---~ 375 (443)
T PRK06058 315 ------------GGTYGGNPVACAAALAAIETIEEDDLV---ARARQIEALMTDRLRALAAEDDRIGDVRGR-GAM---I 375 (443)
T ss_pred ------------CCCCCCCHHHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHhhCCcEEeeecc-ceE---E
Confidence 012334666777788888887666543 45566778888888762 3332 1221 222 2
Q ss_pred EEEecCcccc-CC-CCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 906 IVDLRGLKNT-AG-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 906 vv~~~~~~~~-~g-~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+.+..-+.. .. .-...+.+.|.++|+.+.... +..+.||+.|+..+|++||| +++++|++++++
T Consensus 376 ~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~-~~~~~lr~~Ppl~~t~~~i~---~~~~~l~~~l~~ 442 (443)
T PRK06058 376 AIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCG-TYGNVIRLLPPLVIGDELLR---EGLDVLEAALAD 442 (443)
T ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccC-CCCCEEEEECCCccCHHHHH---HHHHHHHHHHHh
Confidence 2222100000 00 013457777889999875322 12478999999999999999 999999988754
No 327
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=5.1e-14 Score=165.30 Aligned_cols=296 Identities=17% Similarity=0.165 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhcCc--------
Q 001990 633 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~G~-------- 702 (985)
...++.+.|+++++.. ...++.+||++++++++..+|.| +++.+|| +...+||.........|-
T Consensus 114 ~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 187 (459)
T PRK06082 114 TAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI------TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMG 187 (459)
T ss_pred HHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh------cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCC
Confidence 3557888999998633 23578899999999999988876 2345566 477899987555433221
Q ss_pred ----EEEEEeCCCC-----CCC------CHHHHHHHHHhcCCCeEEEEEEcCCCccccccC---HHHHHHHHHHcCCEEE
Q 001990 703 ----KIVSVGTDAK-----GNI------NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG---IDEICKIIHDNGGQVY 764 (985)
Q Consensus 703 ----~v~~v~~~~~-----g~i------Dle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~d---i~eI~~la~~~g~lli 764 (985)
.+..+|.... ... +++++++.++++ +++++|+++-....|.+.+| +++|.++|++||+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI 266 (459)
T PRK06082 188 PLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLI 266 (459)
T ss_pred CCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1233332111 011 146688888643 57888887643223543334 9999999999999999
Q ss_pred EEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCC
Q 001990 765 MDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKS 836 (985)
Q Consensus 765 VD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~ 836 (985)
+|+++. |+.+.|.+ .+|++++ .|.+ ++|.--+|.+++++++.....+..
T Consensus 267 ~DEV~t----G~GRtG~~fa~e~~gv~PDiv~~--gKgl----~gG~~P~~av~~~~~i~~~~~~~~------------- 323 (459)
T PRK06082 267 IDEIPN----GMGRTGEWFTHQAYGIEPDILCI--GKGL----GGGLVPIAAMITKDKYNTAAQISL------------- 323 (459)
T ss_pred Eechhh----CCCccchhhHhHhhCCCCCEEEe--cccc----cCCCCcceEEEEcHHHHhhccCCC-------------
Confidence 999873 34444432 2798875 4766 344323566667766553322100
Q ss_pred CCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecC
Q 001990 837 QPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG 911 (985)
Q Consensus 837 ~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~ 911 (985)
. . +++.|+++.++++.+.|..+.++++ .++..++.++|+++|++. +.++ +.|. +. + +-+.+..
T Consensus 324 -~---~-~T~~gnpl~~aaa~a~L~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-~--~~ve~~~ 391 (459)
T PRK06082 324 -G---H-YTHEKSPLGCAAALATIEVIEQEGL---LEKVKADSQFMRERLLEMKAKYPLIGDVRGI-GL-L--WGVELVT 391 (459)
T ss_pred -C---C-CCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhhCCCeeeeeec-cc-e--eEEEEcc
Confidence 0 0 1234566777778888888866554 456677788888888752 2322 1221 11 1 1222210
Q ss_pred ccccCCC---CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 912 LKNTAGI---EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 912 ~~~~~g~---~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
-...... ....+...+.++|+.+.... .+.||++|...+|++||| ++++++.+++.++.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~i~~~Ppl~it~~eid---~~~~~l~~~l~~~~ 453 (459)
T PRK06082 392 DRHTKERAYDEAEAVLYRCLNNGLSFKVSQ---GNVIQLSPPLIITREELT---QALAILEEAIAKIC 453 (459)
T ss_pred CccccCccHHHHHHHHHHHHhCCCEEEecC---CCEEEEeCCCccCHHHHH---HHHHHHHHHHHHHh
Confidence 0000000 13467778889999874321 378999999999999999 99999999988764
No 328
>PRK07505 hypothetical protein; Provisional
Probab=99.65 E-value=2.2e-14 Score=166.86 Aligned_cols=293 Identities=14% Similarity=0.124 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH--HHhcCcEEEEEe
Q 001990 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGMKIVSVG 708 (985)
Q Consensus 631 ~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~--~~~~G~~v~~v~ 708 (985)
.+...++++.+++++|. ..++.++|++++++++..++.+. ..+ .+++.|+....+|++.... ....+.+++.+|
T Consensus 90 ~~~~~~l~~~la~~~~~--~~~~~~sG~~a~~~ai~~~~~~~-~~~-~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~ 165 (402)
T PRK07505 90 SQILKDLEEALSELFGA--SVLTFTSCSAAHLGILPLLASGH-LTG-GVPPHMVFDKNAHASLNILKGICADETEVETID 165 (402)
T ss_pred hHHHHHHHHHHHHHhCC--CEEEECChHHHHHHHHHHHHhcc-cCC-CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeC
Confidence 45678999999999997 34666788887766665443211 111 1223334455788765322 222456888888
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEcccccc-ccCCCC--C-CcCC
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNA-QVGLTS--P-GYIG 783 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~-~~g~~~--~-g~~g 783 (985)
++ |+++++++++ ++++++++++| |.+|.+. ++++|.++|+++|+++++|++|..+ .+.... . ...+
T Consensus 166 ~~-----d~~~l~~~~~---~~~~~~vl~~p~~~~G~~~-~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~ 236 (402)
T PRK07505 166 HN-----DLDALEDICK---TNKTVAYVADGVYSMGGIA-PVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELD 236 (402)
T ss_pred CC-----CHHHHHHHHh---cCCCEEEEEecccccCCcC-CHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcC
Confidence 73 8999999987 56678888888 4688887 7999999999999999999998432 111110 0 0112
Q ss_pred ---Cc--EEEeCCcccccccCCCCCCcceeeee-cccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHH
Q 001990 784 ---AD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (985)
Q Consensus 784 ---~D--i~~~s~hKtl~~p~g~GGPg~G~l~~-~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~ 857 (985)
.| +++.++.|.|+. + +|++.+ ++++.+.+.....+. ..+ ++. +...++++.
T Consensus 237 ~~~~d~~i~~~s~sK~~~~------~-Gg~~~~~~~~~~~~~~~~~~~~---------t~~-~~~------~~~a~aa~~ 293 (402)
T PRK07505 237 YRLNERTIIAASLGKAFGA------S-GGVIMLGDAEQIELILRYAGPL---------AFS-QSL------NVAALGAIL 293 (402)
T ss_pred CCCCCCeEEEEechhhhhc------c-CeEEEeCCHHHHHHHHHhCCCc---------eeC-CCC------CHHHHHHHH
Confidence 24 555677787742 2 266654 455544332100000 000 111 112333344
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC
Q 001990 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (985)
Q Consensus 858 a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~ 937 (985)
+.+..+..+.+.+..+...++.+++.+.+.. . ..+ .......+.+. ......++.++|.++||.+..+
T Consensus 294 a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~--~~g---~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~v~~~ 361 (402)
T PRK07505 294 ASAEIHLSEELDQLQQKLQNNIALFDSLIPT--E--QSG---SFLPIRLIYIG-----DEDTAIKAAKQLLDRGFYTSPV 361 (402)
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--c--CCC---CCCCEEEEEeC-----CHHHHHHHHHHHHHCCCeEeee
Confidence 5555455555544444443433333322211 1 111 11111122221 0123568999999999998655
Q ss_pred CCC-C---CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 938 SWP-V---PGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 938 ~~p-v---~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+| + .+.||++++..+|+||+| +++++|++++++
T Consensus 362 ~~p~~~~~~~~lRi~~~~~~t~eei~---~~~~~l~~~l~~ 399 (402)
T PRK07505 362 FFPVVAKGRAGLRIMFRASHTNDEIK---RLCSLLKEILDE 399 (402)
T ss_pred cCCCCCCCCceEEEecCccCCHHHHH---HHHHHHHHHHHh
Confidence 444 2 258999999999999999 999999988654
No 329
>PRK12403 putative aminotransferase; Provisional
Probab=99.65 E-value=8.9e-14 Score=163.48 Aligned_cols=305 Identities=15% Similarity=0.162 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcE-------
Q 001990 633 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------- 703 (985)
Q Consensus 633 ~~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~------- 703 (985)
...++.++|+++++.+ ...++.+||++++++++.++|.|....|..++.+||. ...+||.........|.+
T Consensus 99 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~ 178 (460)
T PRK12403 99 AVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGG 178 (460)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCC
Confidence 4668889999998733 2347789999999999999998864444322334443 456899866555433322
Q ss_pred ----EEEEeCCCCC----C--------CCHHHHHHHHH-hcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCE
Q 001990 704 ----IVSVGTDAKG----N--------INIEELRKAAE-ANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQ 762 (985)
Q Consensus 704 ----v~~v~~~~~g----~--------iDle~L~~~i~-~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~l 762 (985)
+..+|...-. . .+++++++.+. +..+++++|+++.. +..|.+.++ +++|.++|++||++
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~l 258 (460)
T PRK12403 179 LIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVL 258 (460)
T ss_pred CCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 2333321100 0 11356766663 23357788887643 456777622 99999999999999
Q ss_pred EEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCCC
Q 001990 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 833 (985)
Q Consensus 763 liVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~~ 833 (985)
+|+|++| .|+.+.|.+ -+|++++ .|.++ +|- |- |.+++++++.+.+.... +
T Consensus 259 LI~DEV~----tGfGRtG~~~a~e~~gv~PDiv~~--gK~lg----gG~~Pi-ga~v~~~~i~~~~~~~~-~-------- 318 (460)
T PRK12403 259 LCADEVI----GGFGRTGEWFAHEHFGFEPDTLSI--AKGLT----SGYVPM-GGLVLSKRIAEALVEQG-G-------- 318 (460)
T ss_pred EEEeccc----cCCCcCchhhhhhhcCCCCCeEEE--ccccc----ccccce-EEEEECHHHHHHHhcCC-C--------
Confidence 9999987 344444432 2688875 47763 331 54 44457777665442100 0
Q ss_pred CCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHH-HHHHHHHHHHhc---cCCee--EcCCCCceeEEEEE
Q 001990 834 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI-LNANYMAKRLEK---HYPIL--FRGVNGTVAHEFIV 907 (985)
Q Consensus 834 ~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~-~~a~~l~~~L~~---~~~i~--~~g~~~~~~~~~vv 907 (985)
. ....+++.|+++.++++.+.|+.+.++++. ++.. .+.++|++.|++ .++++ +.|. + .+ +-+
T Consensus 319 ----~-~~~~~T~~gnPl~~Aaala~L~~i~~~~l~---~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-G-l~--~gi 386 (460)
T PRK12403 319 ----V-FAHGLTYSGHPVAAAVAIANLKALRDEGVV---TRVKDDTGPYLQRCLREVFGDHPLVGEVQGA-G-LV--AAL 386 (460)
T ss_pred ----c-cccCCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHHhcCCCEEeEeec-c-eE--EEE
Confidence 0 000123445677788888889888766543 3453 567788887764 22322 1121 1 12 122
Q ss_pred EecCcccc-CC-CC----HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 908 DLRGLKNT-AG-IE----PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 908 ~~~~~~~~-~g-~~----~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.+..-+.. .. .. ...+.+.+.++|+.+... .+.++++|....|++||| +++++|+++++++.
T Consensus 387 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~~~l~Ppl~it~~eid---~~~~~l~~al~~~~ 454 (460)
T PRK12403 387 QFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----LGRMIMAPALVAGRAEID---ELVDKTRIAVDRTA 454 (460)
T ss_pred EEccCccccccccchhHHHHHHHHHHHhCCEEEEec----CCEEEEECCCCCCHHHHH---HHHHHHHHHHHHHH
Confidence 22100000 00 01 223456668899987422 257999999999999999 99999999998874
No 330
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=2.6e-14 Score=163.85 Aligned_cols=217 Identities=17% Similarity=0.151 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.+|++.|.+.+ +.+++|++++.++++++. .++++|+++...|+..... ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg~e~i-vvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELESGKGA-VVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 55789999999997654 556677766644444331 4678999988766643322 2345788888863
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ ++|++|++++| |++|.+. |+++|+++|+++|+++++|+++..+. +..|-++|+|+++
T Consensus 126 -----~d~e~l~~~i~---~~tklV~lesP~NPtG~v~-dl~~I~~la~~~gi~vIvDea~~~~~--~~~pl~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA---KKPKLILLETPSNPLVRVV-DIAELCQKAKAVGALVAVDNTFLTPV--LQKPLELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCccccc--cCCCcccCCCEEE
Confidence 48999999997 78999999999 5799998 89999999999999999999986432 3456678999999
Q ss_pred eCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|+||+++.+ ++-.+|++++++ ++.+.+... ...++...+ + ..|| +...|-+.
T Consensus 195 ~S~tK~l~G~---~d~~gG~i~~~~~~~~~~~~~~-------------~~~~G~~~~-p-------~~a~--l~~rgl~T 248 (388)
T PRK08861 195 HSTTKYINGH---SDVIGGVLITKTKEHAEELAWW-------------GNCIGATGT-P-------FDSY--MTLRGIRT 248 (388)
T ss_pred eecceeccCC---CcceeEEEEecHHHHHHHHHHH-------------HhccCCCCC-h-------HHHH--HHHhcCCC
Confidence 9999999522 111257776653 343322100 001111111 1 1234 44556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeEcC
Q 001990 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~~---~i~~~g 896 (985)
+.-++++..+++..+++.|++.. .|.+++
T Consensus 249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~ 280 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQTQSLVGTIYHPS 280 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 77788889999999999998743 344544
No 331
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.65 E-value=1.9e-14 Score=166.31 Aligned_cols=277 Identities=17% Similarity=0.193 Sum_probs=181.7
Q ss_pred HhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 205 ~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
..+|..+...++++.+++++|.+. ..++.+|+.+..+++.++ +. +||.|++++..|+++...++. .|++++
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~--~i~~~sG~~a~~~a~~~~-~~--~gd~vi~~~~~~~~~~~~~~~----~g~~~~ 142 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEA--ALVFQSGFNTNQGVLSAL-LR--KGDIVLSDELNHASIIDGLRL----TKATKK 142 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-CC--CCCEEEEEccccHHHHHHHHh----cCCceE
Confidence 456777888889999999999753 345566666666554443 23 889999999999999877653 345544
Q ss_pred E---eCchhhhc-c----CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---------CCc
Q 001990 285 V---SDLKDIDY-K----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---------PGE 346 (985)
Q Consensus 285 ~---~~~~~l~~-l----~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~---------p~~ 346 (985)
. +|++++++ + ++++++|++.++ |.+|.+.|+++|.++||++|+++++| +..+.+.+.. .-.
T Consensus 143 ~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 143 IYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVD-DAHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCccHhhcCCC
Confidence 3 45556654 3 246888877665 78999999999999999999999994 3334332221 113
Q ss_pred ccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhH
Q 001990 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (985)
Q Consensus 347 ~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~ 425 (985)
.+.||++++. |+|+. ++ |+++.++++++.+... ..+ |.+ ++ ..++..
T Consensus 222 ~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~---------~~~-~~~-------------~~--~~~~~~ 269 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNR---------ARP-FLF-------------ST--AQPPAV 269 (385)
T ss_pred cCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHh---------Ccc-ccc-------------cC--CCCHHH
Confidence 5789988997 88853 22 6888887776654100 000 100 11 001122
Q ss_pred HHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHHHcCceeeee
Q 001990 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (985)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~~~Gi~~~~~ 502 (985)
.++..+++ ..+... .++.++..++.+++++.|+++| +++..+. .+.+.+..+. ..++.+.|.++||.++..
T Consensus 270 ~~a~~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 270 VAALAAAV--DELQRS--PELMERLWDNTRFFKAGLGKLG-YDTGGSE-TPITPVVIGDEKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEECCHHHHHHHHHHHHHCCcEEccc
Confidence 33444443 222121 2466777788999999999887 7765321 1223333332 578999999999987431
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 -------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
....+|++++.+++++|+++++++|+.
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 126799999999999999999999974
No 332
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.5e-14 Score=166.33 Aligned_cols=300 Identities=16% Similarity=0.155 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC-
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~- 712 (985)
+.|+++..|+.+|.+...|.+|++++|+.++.+++. +++|+||++++.|.++...+.+.|+..+++....+
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~--------~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVL--------TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhc--------CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 789999999999999998999999998877777654 47899999999999998889999999999976433
Q ss_pred -----CCCCHHHHHHHHHhcCCCe-EEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccC---CCC-CCcC
Q 001990 713 -----GNINIEELRKAAEANRDNL-STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTS-PGYI 782 (985)
Q Consensus 713 -----g~iDle~L~~~i~~~~~~t-~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g---~~~-~g~~ 782 (985)
|.++.+.+++.+.++ ++. +++++++|+++|++- ++++|.+.+++.++|+.+|.+|..-..- +.. ..+.
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~-~~~~k~~vitnpTYdGv~~-n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAH-PDAEKLAVITNPTYDGVCY-NLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred cccccCCCCHHHHHHHHHhC-hhhheeEEEecCccceEee-cHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 689999999988765 455 899999999999998 9999999999999999999998532211 111 1236
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHH
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~ 862 (985)
++|+++-|.||.++. .-...+|.+++. +.+.-.-+... .....+|++ .|.....+..|......
T Consensus 222 ~~~~~tqS~HK~l~a-----lSQaS~iHv~~~--~~~~~~r~nea-----~~~h~STSP----sY~l~ASlD~Ar~~~~~ 285 (557)
T COG1982 222 GADFVTQSTHKLLAA-----LSQASMIHVKDG--RAVNHERFNEA-----LMMHQSTSP----SYPLMASLDVARMQEGN 285 (557)
T ss_pred CceEEEechhhhhhh-----hhhhHHHhhCCC--ccCCHHHHHHH-----HHHHccCCc----hHHHHHHHHHHHHhhhh
Confidence 899999999999842 224455555542 11110000000 000112222 12222222223333333
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCC-----C--------------CceeEEEEEEecCccccCCCCHH
Q 001990 863 MGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGV-----N--------------GTVAHEFIVDLRGLKNTAGIEPE 921 (985)
Q Consensus 863 lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~-----~--------------~~~~~~~vv~~~~~~~~~g~~~~ 921 (985)
-|.+-..+......+.++++++.... ++.+..++. . +|. -+++..+ ..|+++.
T Consensus 286 ~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~--Klti~tp----~~Gipg~ 359 (557)
T COG1982 286 AGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPT--KLTITTP----EFGIPGA 359 (557)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceecccc--EEEEecC----CCCCcHH
Confidence 33332233345556666666666654 233322211 0 111 1222222 3589999
Q ss_pred HHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 922 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 922 ~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
.+.+.|.++||....+. .....+.+++....+..+++ ++++.++
T Consensus 360 ~v~~~L~e~gii~e~~~-d~~~lll~~~~~gk~~~lv~---~L~~f~r 403 (557)
T COG1982 360 IVAKYLREHGIIPEETG-DYSNLLLFSPGIGKWQTLVD---RLLEFKR 403 (557)
T ss_pred HHHHHHHHcCCeeeecC-CceeeEEeeeccchHHHHHH---HHHHHHH
Confidence 99999999999865332 11234566665555666777 6666665
No 333
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=8e-14 Score=160.74 Aligned_cols=273 Identities=19% Similarity=0.179 Sum_probs=183.4
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|++.|.+. +..+.+|++++.++++++ .. +||+||++...|+++...+...++.+|+++++++. +
T Consensus 63 ~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e 137 (388)
T PRK07811 63 RTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAV-LR--PGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLD 137 (388)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHH
Confidence 4457899999999886 456778888888877766 33 89999999999998888776666778999998865 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|+++++| +..+.+....|..+|+|++++|. |++++|-+
T Consensus 138 ~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD-~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~-- 214 (388)
T PRK07811 138 AVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD-NTFASPYLQQPLALGADVVVHSTTKYIGGHSD-- 214 (388)
T ss_pred HHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCcEEEecCceeecCCCC--
Confidence 5666 7889999999998 68999999999999999999999995 45566655667788999999998 87764311
Q ss_pred CCceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
--.|++++++ ++.+.+.. .+..-|. + .+++ .+ |+...+.+-+..
T Consensus 215 -~~gG~vv~~~~~l~~~~~~-------------------------~~~~~g~---~-~s~~---~a--~l~~~~L~tl~~ 259 (388)
T PRK07811 215 -VVGGALVTNDEELDEAFAF-------------------------LQNGAGA---V-PGPF---DA--YLTLRGLKTLAV 259 (388)
T ss_pred -cEEEEEEECCHHHHHHHHH-------------------------HHHhcCC---C-CCHH---HH--HHHHhccCcHHH
Confidence 0147777754 44333310 0000010 0 0121 11 224444455667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEc--CC----CC-----------cceEEEecCC----HHHHHHHHHH--cCceee--
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVEVQ--GL----PF-----------FDTVKVKCAD----AHAIASAAYK--IEMNLR-- 500 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~~~--~~----~~-----------~~~~~i~~~~----~~~l~~~L~~--~Gi~~~-- 500 (985)
+.++..+++..+++.|++..+++-+ +. |. ..-|+|.+++ +.++.+.|.= .+..+.
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~ 339 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGV 339 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCC
Confidence 7777888999999999988546532 11 11 1246777653 3344444431 122110
Q ss_pred ------e--------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 501 ------V--------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 501 ------~--------------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
+ +.++.+|+|++.-+.++=++.|.++|.
T Consensus 340 ~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 387 (388)
T PRK07811 340 ESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLADLEQALG 387 (388)
T ss_pred cceEeCCcccCcccCCHhhcCCCCCEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 113679999998776666677777764
No 334
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.65 E-value=6.5e-15 Score=159.61 Aligned_cols=290 Identities=17% Similarity=0.108 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH--HH-hcCcEEEEEe
Q 001990 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AA-MCGMKIVSVG 708 (985)
Q Consensus 632 ~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~--~~-~~G~~v~~v~ 708 (985)
+...++++.+++++|. ...+++.+|+++|..++.+.. .++..||+...+|-..+.. ++ ..++....+.
T Consensus 35 ~~~~~~e~~~ae~~g~-~a~~Fv~sGT~aN~lal~~~~--------~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~ 105 (342)
T COG2008 35 PTTNALEQRIAELFGK-EAALFVPSGTQANQLALAAHC--------QPGESVICHETAHIYTDECGAPEFFGGGQKLPIV 105 (342)
T ss_pred HHHHHHHHHHHHHhCC-ceEEEecCccHHHHHHHHHhc--------CCCCeEEEeccccceecccCcHHHHcCCceeccC
Confidence 4577899999999999 444666778887744443321 3567888888888654432 22 3444444444
Q ss_pred CCCCCCCCHHHHHHHHHh----cCCCeEEEEEEcCCCcccccc--CHHHHHHHHHHcCCEEEEEcccc-ccccCCCCC--
Q 001990 709 TDAKGNINIEELRKAAEA----NRDNLSTLMVTYPSTHGVYEE--GIDEICKIIHDNGGQVYMDGANM-NAQVGLTSP-- 779 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~----~~~~t~~Vvi~~pn~~G~i~~--di~eI~~la~~~g~lliVD~a~~-~~~~g~~~~-- 779 (985)
..++|.++++++++.|.. |.+...++.++.++..|.+-+ .|++|+++||++|++||+|||-. +++..+..+
T Consensus 106 ~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~ 185 (342)
T COG2008 106 PGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALK 185 (342)
T ss_pred CCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHH
Confidence 457899999999998863 222334555555677788862 48888999999999999999852 222222212
Q ss_pred -CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHH
Q 001990 780 -GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 780 -g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a 858 (985)
-..++|++++++.|.+ |.|+..+++.+.+++....-+ .+..| +.+. +...+++++.
T Consensus 186 ~~~~~~D~v~~~~tK~g------~~~~gAiv~gn~~~~~~a~~~-----------rK~~G-gl~~-----k~r~laA~~~ 242 (342)
T COG2008 186 TIKSYVDSVSFCLTKGG------GAPVGAIVFGNRDFAKRARRW-----------RKRAG-GLMR-----KARFLAAQGL 242 (342)
T ss_pred HHHhhCCEEEEecccCC------cceeeeEEEcCHHHHHHHHHH-----------HHHhc-ccHh-----hhhHHHHHHH
Confidence 1357999999998954 456677888887766543210 00011 0111 2233333333
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC
Q 001990 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (985)
Q Consensus 859 ~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~ 936 (985)
..+.+.-......+..+.+++|+++|.+ |+++..+ +..|.+.++++ ....+.|...|+....
T Consensus 243 --~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~----------~~~i~~l~~~~~~~~~ 306 (342)
T COG2008 243 --YALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLP----------ESAIEALRLAGALFYR 306 (342)
T ss_pred --HHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECC----------hHHHHHHHhhchhhee
Confidence 3343443344445555568999999985 5666543 23566666653 1223666666665432
Q ss_pred --CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 937 --MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 937 --~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
...+....+|+..+..+|++||| +|+..++++.
T Consensus 307 ~~~~~~~~~~vRfvts~a~~~edv~---~~~~~~~~~~ 341 (342)
T COG2008 307 GVLIGAHGEIVRFVTSWATSEEDVD---ELVAAIKALL 341 (342)
T ss_pred eeeccCCCceEEEEeeccCCHHHHH---HHHHHHHHhh
Confidence 11111136999999999999999 9999888753
No 335
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=7.8e-14 Score=162.44 Aligned_cols=297 Identities=15% Similarity=0.169 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC--------c
Q 001990 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--------M 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G--------~ 702 (985)
..++.+.++++++-+ ...++.+||+++++++++.+|.| +++.+||. ..++||....+....| +
T Consensus 85 ~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 85 YVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAA------TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 456788888887532 23578899999999999988876 24556664 6689998754433211 1
Q ss_pred -----EEEEEeCCCC--CC---CCHHHHHHHHHh--cCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEE
Q 001990 703 -----KIVSVGTDAK--GN---INIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMD 766 (985)
Q Consensus 703 -----~v~~v~~~~~--g~---iDle~L~~~i~~--~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD 766 (985)
.+..+|++.+ +. -+++++++.+++ .++++++|+++-. ...|++.+ .+++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 2344554321 21 125566777753 2357888877632 24665532 3899999999999999999
Q ss_pred ccccccccCCCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCC
Q 001990 767 GANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 767 ~a~~~~~~g~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
+++. ++ .+.|. .-+|++++ .|.++ ||-.+|++++++++.+.+.....
T Consensus 239 Ev~t-G~---gr~G~~~a~~~~gv~pDi~tl--sK~l~-----~G~pigav~~~~~i~~~~~~~~~-------------- 293 (425)
T PRK07495 239 EVQT-GF---ARTGKLFAMEHHEVAADLTTM--AKGLA-----GGFPLAAVTGRAEIMDAPGPGGL-------------- 293 (425)
T ss_pred chhh-cC---CcCCCceeecccCCCCCEEee--hhhhc-----CCccceEEEEcHHHHhccCCCCc--------------
Confidence 9874 22 22221 23677665 47763 34457888888877765432110
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCcc
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK 913 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~ 913 (985)
.+++.|+++.++++.+.+..+..+++. ++.....++|+++|++. +..+ +.|. + .+ +-+.+..-.
T Consensus 294 ----~~T~~~~pl~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-G-l~--~~iel~~~~ 362 (425)
T PRK07495 294 ----GGTYGGNPLGIAAAHAVLDVIEEEDLC---ERANQLGNRLKQRLASLRETVPEIADIRGP-G-FM--NAVEFNDAD 362 (425)
T ss_pred ----CCCCCCCHHHHHHHHHHHHHHHhchHH---HHHHHHHHHHHHHHHHHHhhCCCeeeeecC-c-eE--EEEEEecCC
Confidence 011233556666677778777655443 45566777888887652 2221 1122 1 11 223332100
Q ss_pred ccCC--CCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 914 NTAG--IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 914 ~~~g--~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.... .....+.+.+.++|+++.... +..+.||+.|....|++|+| +++++|+++++++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~~~~~r~~Ppl~it~~~id---~~~~~l~~~l~~~~ 423 (425)
T PRK07495 363 SGLPSAEFANRVRLKALEKGLILLTCG-VHGNVIRFLAPITIQDDVFA---EALDILEASILEAS 423 (425)
T ss_pred CCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEeCCCccCHHHHH---HHHHHHHHHHHHHh
Confidence 0000 013467788889999874332 12478999999999999999 99999999988764
No 336
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.64 E-value=5.1e-14 Score=162.43 Aligned_cols=291 Identities=19% Similarity=0.183 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCcHHHHHhcCcEE---EEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCGMKI---VSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~-~~Hg~~~~~~~~~G~~v---~~v~ 708 (985)
...++++.+++++|.+. .+.++||+++++.++.+++.+...++ .++++|++++ ++|+.........+-.. ...+
T Consensus 70 ~~~~l~~~la~~~g~~~-~~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00707 70 PQEELAEKLVEHSGADR-VFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEP 147 (379)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCC
Confidence 46689999999999874 46778888888777776665432122 1357788755 55655444332211110 0112
Q ss_pred CCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEEccccccccCCCC--
Q 001990 709 TDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-- 778 (985)
Q Consensus 709 ~~~~g----~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~---~di~eI~~la~~~g~lliVD~a~~~~~~g~~~-- 778 (985)
...+. ..|++++++.++ +++++|+++.++ ++|++. +++++|.++|+++|+++++|+++. +++.-..
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~ 223 (379)
T TIGR00707 148 LVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFF 223 (379)
T ss_pred CCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhh
Confidence 21111 128999999997 678888886554 466542 248999999999999999999984 2211000
Q ss_pred C-C--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHH
Q 001990 779 P-G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 779 ~-g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
+ . ....|+++ ++|+|+ +|.++|++++++++++.+..... . ...+. ++....+
T Consensus 224 ~~~~~~~~~d~~t--~sK~~~-----~G~riG~~~~~~~~~~~~~~~~~-------------~-~~~~~----~~~~~~a 278 (379)
T TIGR00707 224 AYEHYGIEPDIIT--LAKGLG-----GGVPIGATLAKEEVAEAFTPGDH-------------G-STFGG----NPLACAA 278 (379)
T ss_pred hHHhcCCCCCEEE--Eccccc-----CCcccEEEEEcHHHHhhhcCCCC-------------C-CCCCC----CHHHHHH
Confidence 1 1 12357665 468874 46779999998877665532100 0 01111 2233444
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
+.+.+..+...+ ..++..+++++++++|++ +......... .....+.+.++ .+..++.+.|.++||.+
T Consensus 279 a~aaL~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~g~~~~~~~~-------~~~~~~~~~l~~~Gv~v 347 (379)
T TIGR00707 279 ALAVLEVIEKER---LLENVKEKGDYFKERLEELGKNYPNKEVR-GKGLMLGIELE-------APCKDIVKKALEKGLLV 347 (379)
T ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhhCCCCccc-cCceEEEEEec-------CcHHHHHHHHHHCCcEE
Confidence 555666554332 345566777888888875 2222111000 01112334443 24678999999999987
Q ss_pred CCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 935 PTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 935 ~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
.... .+.+|++++..+|++|++ ++++.|+++
T Consensus 348 ~~~~---~~~lRi~~~~~~t~~~i~---~~~~~l~~~ 378 (379)
T TIGR00707 348 NCAG---PKVLRFLPPLIITKEEID---EAVSALEEA 378 (379)
T ss_pred eeCC---CCEEEEECCCcCCHHHHH---HHHHHHHHh
Confidence 5322 378999999999999999 999999865
No 337
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.64 E-value=3.9e-14 Score=164.80 Aligned_cols=277 Identities=15% Similarity=0.127 Sum_probs=174.9
Q ss_pred HHHHH-HHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHH-hhcCCCeEEEEe--
Q 001990 211 ESLLN-FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVS-- 286 (985)
Q Consensus 211 ~~i~e-~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~-~a~~~gi~v~~~-- 286 (985)
+.+.+ .++.+++++|.+..++ +..+||.++.+++.++ .. +||+|++++..|+++...+.. .++..|.+++.+
T Consensus 64 ~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~a~~~~l~~l-~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 139 (402)
T cd00378 64 DEIEDLAIERAKKLFGAEYANV-QPHSGSQANLAVYFAL-LE--PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY 139 (402)
T ss_pred HHHHHHHHHHHHHHhCCCceee-ecCCcHHHHHHHHHHh-cC--CCCEEEEecCccCccccccccccccccceeEEEecC
Confidence 44444 4567889999987544 3346777777766665 23 899999999999876554321 123356554443
Q ss_pred ---------Cchhhhc-c-CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcccce
Q 001990 287 ---------DLKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGAD 350 (985)
Q Consensus 287 ---------~~~~l~~-l-~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-----~~p~~~GaD 350 (985)
|++++++ + .+++++|++.+|+ +|...|+++|+++||++|+++++|. .++.|.. ..+.. ++|
T Consensus 140 ~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~-~~~~~~~~~I~~l~~~~~~~li~D~-a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 140 GVDPETGLIDYDALEKMALEFKPKLIVAGASA-YPRPIDFKRFREIADEVGAYLLVDM-AHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-cCCCcCHHHHHHHHHhcCCEEEEEc-cchhhhhhcccCCCccc-CCc
Confidence 2345555 4 4578888877774 4778899999999999999999942 2233321 22334 789
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHH
Q 001990 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (985)
Q Consensus 351 i~v~s~-k~lg~P~~~GGP~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a 428 (985)
++++|+ |+|+ ||..|++.+++ ++.+.+.... .+ + ..++++. ....+
T Consensus 217 v~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~~---~~~~a 264 (402)
T cd00378 217 VVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV---------FP-G-------------LQGGPHL---HVIAA 264 (402)
T ss_pred EEEeccccCCC------CCCceEEEeccHHHHHHHHHHh---------Cc-c-------------ccCCchH---HHHHH
Confidence 999998 7663 34456666665 6665541000 00 0 0011111 22222
Q ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcceEEEecC--C--HHHHHHHHHHcCceeeee-
Q 001990 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCA--D--AHAIASAAYKIEMNLRVV- 502 (985)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~~~~i~~~--~--~~~l~~~L~~~Gi~~~~~- 502 (985)
+..++ ......++++..++..++++++++.|++.| ++++..+ ....+.+.++ + ..++.+.|.++||.+...
T Consensus 265 ~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 265 KAVAL--KEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 22222 222223567888889999999999999987 8876322 2223445544 2 567777788889987521
Q ss_pred ---------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001990 503 ---------DSNTVTASFDETT----TLEDVDKLFIVFAG 529 (985)
Q Consensus 503 ---------~~~~lris~~~~~----t~edid~ll~~l~~ 529 (985)
.+..+|++++..+ +.+|++.+++.|..
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 2357999999865 79999999999975
No 338
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.64 E-value=4e-14 Score=165.10 Aligned_cols=298 Identities=14% Similarity=0.166 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.++++++++.+ ...++.++|++++++++..+|.|...+|..++.+||. ...+||....+..+.|-
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 446778888887543 2347788999999999998888765444334556664 77889876544332221
Q ss_pred ----EEEEEeCCCC-C-----CCCHHHHHHHHHhcCCCeEEEEEEcC-C-Cccccc---cCHHHHHHHHHHcCCEEEEEc
Q 001990 703 ----KIVSVGTDAK-G-----NINIEELRKAAEANRDNLSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDG 767 (985)
Q Consensus 703 ----~v~~v~~~~~-g-----~iDle~L~~~i~~~~~~t~~Vvi~~p-n-~~G~i~---~di~eI~~la~~~g~lliVD~ 767 (985)
.+..++.... . ..|++++++.+.++.+++++|+++.. . ..|... .++++|.++|+++|+++|+|+
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DE 249 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADE 249 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1112221110 0 12578888888766567888887742 3 334432 269999999999999999999
Q ss_pred cccccccCCCCCCc--------CCCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCCCCCCCC
Q 001990 768 ANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 768 a~~~~~~g~~~~g~--------~g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
+| .++ .+.|. ..+|++++ .|.|+ || .-++.+++++++.+.+.....+ .
T Consensus 250 v~-tG~---Gr~G~~~~~~~~~v~pDi~~~--gK~l~-----gG~~p~~a~~~~~~~~~~~~~~~~~------------~ 306 (427)
T TIGR00508 250 IA-TGF---GRTGKLFACEHAGVVPDILCV--GKALT-----GGYMTLSATVTTDKVAQTISSGEAG------------C 306 (427)
T ss_pred cc-cCC---CcCCccchhhhcCCCCCEEEe--chhhh-----cCcccceEEEEcHHHHHHHhcCCCC------------c
Confidence 98 333 22221 24788875 48773 44 3456677777765544321000 0
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEEEecCccc
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN 914 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv~~~~~~~ 914 (985)
. ...+++.|++..++++.+.|..+..+.+ .++...+.++|+++|++. .... ..|. +. + +.+.+..
T Consensus 307 ~-~~~~T~~g~p~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~-G~-~--~~i~~~~--- 375 (427)
T TIGR00508 307 F-MHGPTFMGNPLACAVAEASLAILLEGEW---QKQVSAIENQLKRELSPLRKNPVVKDVRVL-GA-I--GVVEMYK--- 375 (427)
T ss_pred c-ccCCCCCcCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhhcCCCEEeEecc-cc-E--EEEEECC---
Confidence 0 0011233456667777788887765544 356677888999988762 1111 1111 11 1 2233321
Q ss_pred cCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 915 ~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
......+.++|.++||++... .+.+|++|+..+|++||| +++++|++.+.+
T Consensus 376 --~~~~~~~~~~l~~~Gv~~~~~----~~~l~~~ppl~~t~~~id---~~~~~l~~~l~~ 426 (427)
T TIGR00508 376 --PVNVEELQKKFVEQGVWIRPF----GKLIYVMPPYIITTEQLQ---KLTAALIEALHE 426 (427)
T ss_pred --ccCHHHHHHHHHHCCeEEEec----CCEEEEECCCCCCHHHHH---HHHHHHHHHHhc
Confidence 234678999999999998532 357999999999999999 999999988754
No 339
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=6.4e-14 Score=162.84 Aligned_cols=142 Identities=21% Similarity=0.235 Sum_probs=115.9
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeC-c---
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L--- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~-~--- 288 (985)
..++++.+|++.|.+. +..+.+|++++.++++++ +. +||+||++...|.++...+...++..|++++++| .
T Consensus 71 ~~~le~~la~l~g~~~--~v~fsSG~~Ai~~al~~l-l~--~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~ 145 (437)
T PRK05613 71 VEALENRIASLEGGVH--AVAFASGQAAETAAILNL-AG--AGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDP 145 (437)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHh-cC--CCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCH
Confidence 4568899999999853 678888888888777665 23 8999999999999997766555677899999986 3
Q ss_pred hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cccc
Q 001990 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (985)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg 360 (985)
+++++ ++++|++|++.++ |++|.+.|+++|+++||++|++++||+ .++.|.+..|.++|+|++++|+ |.++
T Consensus 146 e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~-t~a~g~~~~p~~~GaDivv~S~~K~l~ 219 (437)
T PRK05613 146 ESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN-TIATAALVRPLELGADVVVASLTKFYT 219 (437)
T ss_pred HHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC-CCccccccChHHhCCCEEEeeccceec
Confidence 45666 8889999988765 889999999999999999999999953 4567766778899999999999 5443
No 340
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.64 E-value=7.1e-14 Score=162.55 Aligned_cols=297 Identities=12% Similarity=0.069 Sum_probs=172.7
Q ss_pred HHHHHHHHHhC-----CCccceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeC
Q 001990 636 NLGEWLCTITG-----FDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (985)
Q Consensus 636 el~~~la~l~G-----~~~~~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~ 709 (985)
++++.++++++ .+...+..++| +++.. ++++.+. .++++|+++.+.+..+...++..|++++.++.
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~ 148 (401)
T TIGR01264 77 SAREAIASYYHNPDGPIEADDVVLCSGCSHAIE---MCIAALA-----NAGQNILVPRPGFPLYETLAESMGIEVKLYNL 148 (401)
T ss_pred HHHHHHHHHHhhcCCCCCHHHEEECcChHHHHH---HHHHHhC-----CCCCEEEEeCCCChhHHHHHHHcCCEEEEeec
Confidence 45555666554 33444444444 44442 3333321 36788999988776666667889999999987
Q ss_pred CC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC--CCCCCc
Q 001990 710 DA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPGY 781 (985)
Q Consensus 710 ~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g--~~~~g~ 781 (985)
+. ++.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..-. .+ +.....
T Consensus 149 ~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (401)
T TIGR01264 149 LPDKSWEIDLKQLESLID---EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225 (401)
T ss_pred CCccCCCCCHHHHHHHhc---cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHH
Confidence 54 36899999999887 67888999999 5799885 258999999999999999999874211 11 100011
Q ss_pred CCC---cEEEeCCcccccccCCCCCCcceeeeecc------cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 782 IGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKK------HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 782 ~g~---Di~~~s~hKtl~~p~g~GGPg~G~l~~~~------~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
+.. -+++.|+.|+|+. .|.++|++++.+ ++...+... . ....+++ ...+
T Consensus 226 ~~~~~~vi~~~SfSK~~~~----~GlRiG~iv~~~~~~~~~~~~~~~~~~------------~-~~~~~~~--~~~q--- 283 (401)
T TIGR01264 226 LSSTVPILSCGGLAKRWLV----PGWRLGWIIIHDRRGILRDIRDGLVKL------------S-QRILGPC--TIVQ--- 283 (401)
T ss_pred cCCCCcEEEEccCcccCCC----ccceEEEEEecCcchhHHHHHHHHHHH------------h-hccCCCC--cHHH---
Confidence 111 2567777887754 478999999864 122111100 0 0001111 1111
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~G 931 (985)
.++..+|....++-+.+..+...++.+++.+.|++...+.+..+.+..+ +.++++........+..++.+.|. ++|
T Consensus 284 -~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~l~~~~g 360 (401)
T TIGR01264 284 -GALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMY--MMVGIEMEHFPEFKNDVEFTERLVAEQS 360 (401)
T ss_pred -HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeE--EEEEecccccCCCCCHHHHHHHHHHhCC
Confidence 1122333321123344555566677788888887621222212222222 334442100001134677888875 789
Q ss_pred CccCCC-CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 932 FHGPTM-SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 932 i~~~~~-~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
|.+... .|..++.+|++++. .+++++ ..++.|.+.++
T Consensus 361 I~v~pg~~f~~~~~iRis~~~--~~~~l~---~~l~rl~~~~~ 398 (401)
T TIGR01264 361 VFCLPGSCFEYPGFFRVVLTV--PVVMME---EACSRIQEFCE 398 (401)
T ss_pred EEEeCchhcCCCCeEEEEEcC--CHHHHH---HHHHHHHHHHh
Confidence 986432 23336899999873 567787 77777777654
No 341
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.64 E-value=2.5e-14 Score=167.53 Aligned_cols=294 Identities=14% Similarity=0.162 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHh--cCc--------
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAM--CGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~--~G~-------- 702 (985)
..++.+.|++++......++.+||+++++++++++|.| .++++||. ..++||........ .|.
T Consensus 90 ~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~------~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 163 (423)
T TIGR00713 90 EILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGY------TGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTS 163 (423)
T ss_pred HHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEEcCCCCCChhhhhccccCcccccCCCCC
Confidence 45788888888754334577899999999999988876 24567776 44678765433221 110
Q ss_pred ---------EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEE-cCCCccccccC---HHHHHHHHHHcCCEEEEEccc
Q 001990 703 ---------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YPSTHGVYEEG---IDEICKIIHDNGGQVYMDGAN 769 (985)
Q Consensus 703 ---------~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~-~pn~~G~i~~d---i~eI~~la~~~g~lliVD~a~ 769 (985)
.+..+|. .|+++++++++++.+++++|+++ .|+..|.+.++ +++|.++|++||+++|+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 238 (423)
T TIGR00713 164 PGVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM 238 (423)
T ss_pred CCCCcccccceEEeCC-----CCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 1222222 38999999998655678888886 56667877632 899999999999999999998
Q ss_pred ccccc-C-CCCCC--cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccc
Q 001990 770 MNAQV-G-LTSPG--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (985)
Q Consensus 770 ~~~~~-g-~~~~g--~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~ 845 (985)
. ++. + ..... ...+|+++ +.|.+ + +|..+|++++++++.+.+... +. ....++
T Consensus 239 ~-g~r~g~~~~~~~~~~~pDi~t--~sK~l----~-~G~pig~v~~~~~i~~~~~~~--~~-------------~~~~~T 295 (423)
T TIGR00713 239 T-GFRVALGGAQEYFGVEPDLTT--LGKII----G-GGLPVGAFGGRREIMERLAPE--GP-------------VYQAGT 295 (423)
T ss_pred c-ccccCcchhHHHhCCCcchhh--hhhhh----c-CCCceeeeeEHHHHHHhhCcC--CC-------------eeeccC
Confidence 3 221 0 00000 12357653 34666 4 456689999998877665321 00 000011
Q ss_pred cchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----c-cCCeeEcCCCCceeEEEEEEecCccc---cCC
Q 001990 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE----K-HYPILFRGVNGTVAHEFIVDLRGLKN---TAG 917 (985)
Q Consensus 846 ~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~----~-~~~i~~~g~~~~~~~~~vv~~~~~~~---~~g 917 (985)
+.+++..++++.+.|..+.++++.+ +..+..+++++.|. + ++.....+. +..+ .+.++.+.... ...
T Consensus 296 ~~~~~~~~aaa~a~l~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~v~~~-g~~~-~v~~~~~~~~~~~~~~~ 370 (423)
T TIGR00713 296 LSGNPLAMAAGLATLKLLDEEGVYT---ELDELAKRLAEGLSEVLEDTGIPHTVNRV-GSMF-SLFFTEEEVTNYADAKK 370 (423)
T ss_pred CCCCHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHHHhcCCCeEEEee-ccEE-EEEEecCCCCChhhhhc
Confidence 2234555666777777775554332 33344455555543 3 222212222 1121 12222110000 000
Q ss_pred CC---HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 918 IE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 918 ~~---~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+ ...+.+.|.++|+.+....+ +.+++++. +|++||+ ++++.|.+++++
T Consensus 371 ~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~l~~~--~t~~~i~---~~~~~l~~~l~~ 422 (423)
T TIGR00713 371 SDTELFAKFFHEMLDKGVFLPPSQF---EACFLSAA--HTEEDIE---NTIEAAEEVFAE 422 (423)
T ss_pred ccHHHHHHHHHHHHHCCeEEecCCc---cceeeECC--CCHHHHH---HHHHHHHHHHhh
Confidence 11 23678889999998754322 46788775 7999999 999999887754
No 342
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.64 E-value=5.1e-14 Score=162.01 Aligned_cols=212 Identities=22% Similarity=0.206 Sum_probs=152.2
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--hh
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--KD 290 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--~~ 290 (985)
..++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||++...|+++...++.+ +..|++++++++ ++
T Consensus 55 ~~~lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~l-l~--~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~d~~~ 128 (385)
T PRK08574 55 LRPLEEALAKLEGGVD--ALAFNSGMAAISTLFFSL-LK--AGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYPSTED 128 (385)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECCCHHH
Confidence 3457899999999875 667899998888777654 23 8999999999999999888764 568998887654 56
Q ss_pred hhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 291 IDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 291 l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
+++ +++ +|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |++++|-
T Consensus 129 l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~--- 204 (385)
T PRK08574 129 IIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD-NTFATPLLYRPLRHGADFVVHSLTKYIAGHN--- 204 (385)
T ss_pred HHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCcEEEeeCceeecCCC---
Confidence 776 776 8999999887 78999999999999999999999995 45666766667789999999998 8776441
Q ss_pred CCceEEEEE-chhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~-~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
..-.|.+.+ ++++.+++- ..|+..|+. . +++ .| |+...+-+-+..
T Consensus 205 d~~gG~vi~~~~~~~~~~~-------------------------~~~~~~g~~-~---~p~---~a--~l~l~~l~tL~~ 250 (385)
T PRK08574 205 DVVGGVAVAWSGEFLEELW-------------------------EWRRRLGTI-M---QPF---EA--YLVLRGLKTLEV 250 (385)
T ss_pred CceeEEEEECcHHHHHHHH-------------------------HHHHhcCCC-C---CHH---HH--HHHHcccCcHHH
Confidence 112353444 455544330 001111110 0 122 11 234455556777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
+.++..+++.++++.|++.+.++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC
Confidence 77888899999999999875453
No 343
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=3.4e-14 Score=162.83 Aligned_cols=217 Identities=16% Similarity=0.099 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.+.||..|+.++++++. +++|+||+++..|+..... +...|++++.++.
T Consensus 63 ~~~Le~~iA~le~~~~~-~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~ 133 (394)
T PRK09028 63 HFAFQAAIVELEGGAGT-ALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDP 133 (394)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECC
Confidence 44788999999887654 456677777655544432 4678999988766544332 3457889888765
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |.++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||+++..+. ...|.++|+|+++
T Consensus 134 ~-----~~e~l~~~l~---~~TklV~lespsNPtg~v~-dl~~I~~la~~~g~~lvvD~t~a~p~--~~~Pl~~GaDivv 202 (394)
T PRK09028 134 M-----IGEGIRELIR---PNTKVLFLESPGSITMEVQ-DVPTLSRIAHEHDIVVMLDNTWASPI--NSRPFEMGVDISI 202 (394)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCccccc--cCCccccCceEEE
Confidence 3 5688999887 88999999999 5789887 89999999999999999999986432 3577889999999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|+|||++.+ |.--+|.++.++++.+.+.... ..++...+ .-.|| +...|-+.+
T Consensus 203 ~S~tK~l~Gh---~d~~~G~~~~~~~~~~~l~~~~-------------~~~G~~~~--------p~~a~--l~~rgl~TL 256 (394)
T PRK09028 203 QAATKYIVGH---SDVMLGTATANEKHWDQLREHS-------------YLMGQCTS--------PDDVY--LAMRGLRTL 256 (394)
T ss_pred EeCCeEecCC---CCEEEEEEECCHHHHHHHHHHH-------------HhcCCCCC--------HHHHH--HHHcccCcH
Confidence 9999999522 1123566655554433221000 00111111 11234 444555667
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---CeeEcC
Q 001990 869 TEASKIAILNANYMAKRLEKHY---PILFRG 896 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~~~---~i~~~g 896 (985)
.-++++..+++..+++.|++.. .+.+++
T Consensus 257 ~lR~~~~~~na~~la~~L~~~p~v~~V~yPg 287 (394)
T PRK09028 257 GVRLAQHEKNALKVANWLATRPEVDHVRHPA 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 7788899999999999998732 344554
No 344
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.64 E-value=2.3e-14 Score=163.99 Aligned_cols=283 Identities=11% Similarity=0.069 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC-
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~- 712 (985)
..++++.+++++|.+...+..++|++. +...+++.+ .+++ +++..+.+..+...++..|.+++.+|.+++
T Consensus 57 ~~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~l------~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 127 (356)
T PRK08056 57 YRHLHQALARHHQVPASWILAGNGETE--SIFAVVSGL------KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREAD 127 (356)
T ss_pred HHHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHHHh------CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEeccccc
Confidence 457889999999988766666556542 222333332 2445 565555444444557789999999998643
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccc-cC--C-CCCCcCC
Q 001990 713 -GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VG--L-TSPGYIG 783 (985)
Q Consensus 713 -g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~-~g--~-~~~g~~g 783 (985)
..+| +++.+.++ +++++|++++| |++|.+. + +++|+++|+++|+++++|+++..-. .+ . .......
T Consensus 128 ~~~~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 202 (356)
T PRK08056 128 GWQLT-DAILEALT---PDLDCLFLCTPNNPTGLLP-ERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNP 202 (356)
T ss_pred CCCcc-HHHHHhcc---CCCCEEEEeCCcCCCCCCC-CHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCC
Confidence 2444 45556665 78899999999 5799986 5 8889999999999999999863111 00 0 0011234
Q ss_pred CcEEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHH
Q 001990 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (985)
Q Consensus 784 ~Di~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~ 862 (985)
.++++.|++|+|+.| |.++|+++++ +++...+.... ...+++ .....++...+.
T Consensus 203 ~~i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~~~~--------------~~~~~~------~~~~~~a~~~l~- 257 (356)
T PRK08056 203 HLWVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMRRQQ--------------MPWSIN------AFAALAGEVILQ- 257 (356)
T ss_pred CEEEEEechhhccCc----chhheeeecCCHHHHHHHHHhC--------------CCCchh------HHHHHHHHHHhC-
Confidence 568889999999654 7899999874 44443332100 000111 111111112221
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CCC-
Q 001990 863 MGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP- 940 (985)
Q Consensus 863 lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~p- 940 (985)
+.+-+.+..+...++++++.+.|++...+....+++. + +.+++. .+..++++.|.++||.+... .|+
T Consensus 258 -~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~--~~~~~~-------~~~~~~~~~l~~~gI~v~~~~~f~~ 326 (356)
T PRK08056 258 -DRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRAN-Y--LFLRCE-------RPDIDLQRALLTQRILIRSCANYPG 326 (356)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCc-E--EEEEcC-------CChHHHHHHHHHCCeEEEECCCCCC
Confidence 2222334445566777888888876212222122222 2 334443 24568999999999987432 232
Q ss_pred -CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 941 -VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 941 -v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.++++||++ .+.++.+ +|+++|++++
T Consensus 327 ~~~~~iRis~---~~~~~~~---~l~~~l~~~~ 353 (356)
T PRK08056 327 LDSRYYRVAI---RSAAENE---RLLAALRNVL 353 (356)
T ss_pred CCCCEEEEEE---cCHHHHH---HHHHHHHHHH
Confidence 136899998 5789999 9999998764
No 345
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.64 E-value=1.2e-13 Score=162.05 Aligned_cols=297 Identities=13% Similarity=0.126 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHhCCC----ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC------
Q 001990 633 MFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------ 701 (985)
Q Consensus 633 ~~~el~~~la~l~G~~----~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G------ 701 (985)
...++.+.|++++... ...++.+||+++++++++.+|.| ++|.+||. ..++||.........|
T Consensus 83 ~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~ 156 (442)
T TIGR00709 83 LKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY------TGRTNVISFSGGFHGMTIGALAVTGNLFAKN 156 (442)
T ss_pred HHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCchHHHHhhcCChhhhc
Confidence 3457888899987532 22355689999999999988876 24556664 6789998766654322
Q ss_pred -c-----EEEEEeCCCCCCC--------CH----HHHHHHHHh---cCCCeEEEEEEcC-CCcccccc---CHHHHHHHH
Q 001990 702 -M-----KIVSVGTDAKGNI--------NI----EELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKII 756 (985)
Q Consensus 702 -~-----~v~~v~~~~~g~i--------Dl----e~L~~~i~~---~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la 756 (985)
. .+..+|....... +. +.+++.+++ ..+++++|+++.. +..|.+.+ -+++|.++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc 236 (442)
T TIGR00709 157 AVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVT 236 (442)
T ss_pred cCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 1 1333443211111 11 223444431 2256888888753 45566542 399999999
Q ss_pred HHcCCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC
Q 001990 757 HDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (985)
Q Consensus 757 ~~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~ 828 (985)
++||+++|+|+++. |+.+.|++ -+|++++ .|.++ + |..+|.+++++++....+..
T Consensus 237 ~~~g~llI~DEV~t----GfGRtG~~~a~~~~gv~PDiv~~--gK~l~----~-G~Pigav~~~~~~~~~~~~~------ 299 (442)
T TIGR00709 237 RKHDIKLILDEVQA----GFGRSGTMFAFEHAGIEPDFVVM--SKAVG----G-GLPLAVLLIAPEFDAWQPAG------ 299 (442)
T ss_pred HHcCCEEEEecccc----CCCCCCchhHHHHcCCCCcEEEE--ccccc----C-CcccEEEEEchHHhccCCCc------
Confidence 99999999999873 33333322 3698885 47763 3 45577788887642221110
Q ss_pred CCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCee--EcCCCCceeE
Q 001990 829 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPIL--FRGVNGTVAH 903 (985)
Q Consensus 829 ~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~--~~g~~~~~~~ 903 (985)
+ .+++.|+++.++++.+.|..+.++++.+ +..++.++|.++|++ .++++ +.|. + .+
T Consensus 300 ----~---------~~T~~gnpla~aaa~a~L~~i~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-G-l~- 360 (442)
T TIGR00709 300 ----H---------TGTFRGNQLAMVTGTEALNYWKDDNLAQ---NAQERGERITSFLDDMIKEHPCIGNVRGR-G-LM- 360 (442)
T ss_pred ----C---------CCCCCcCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHhCCCeeeeecc-c-eE-
Confidence 0 0123356677777888888876666543 556677888888865 22221 1221 1 12
Q ss_pred EEEEEecCcccc------C--CC-CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 904 EFIVDLRGLKNT------A--GI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 904 ~~vv~~~~~~~~------~--g~-~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+-+.+...... . .. -...+...|.++|+.+.... ...+.||+.|+..+|++||| +++++|.+++.+
T Consensus 361 -~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~~l~~~Ppl~it~~ei~---~~~~~l~~~l~~ 435 (442)
T TIGR00709 361 -QGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG-REGEVFRLLCPITIDQEECE---EGISRFKQAVEE 435 (442)
T ss_pred -EEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC-CCCCEEEEECCCCCCHHHHH---HHHHHHHHHHHH
Confidence 12222100000 0 00 13467778889999874321 11478999999999999999 999999999877
Q ss_pred HH
Q 001990 975 TT 976 (985)
Q Consensus 975 ~~ 976 (985)
+.
T Consensus 436 ~~ 437 (442)
T TIGR00709 436 AL 437 (442)
T ss_pred HH
Confidence 63
No 346
>PLN02187 rooty/superroot1
Probab=99.64 E-value=6e-14 Score=165.36 Aligned_cols=345 Identities=13% Similarity=0.099 Sum_probs=194.3
Q ss_pred CcccccccceecccCc----cccccc-----cccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhC--CCccceecCh
Q 001990 588 CHSMIPLGSCTMKLNA----TTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNA 656 (985)
Q Consensus 588 ~~~~~~lGs~~~~~~~----~~~~~~-----~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G--~~~~~~~~~s 656 (985)
...+++||.|.+.+.+ ..+... +..+.. +.|.| .+|..++.+.+.+++.+.+| .+...+..++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKG---NSYGP---GAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCC---CCCCC---CCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 4568899988665322 111111 111222 23433 35765555555555544444 3444554444
Q ss_pred H-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHHHHhcCCCeEE
Q 001990 657 G-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--AKGNINIEELRKAAEANRDNLST 733 (985)
Q Consensus 657 G-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~--~~g~iDle~L~~~i~~~~~~t~~ 733 (985)
| +++...+ ++.+. .++++|+++++.+..+...++..|++++.++.. ++..+|+++|+++++ +++++
T Consensus 139 G~~~al~~~---~~~l~-----~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~ 207 (462)
T PLN02187 139 GCNQGIEIV---FESLA-----RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVA 207 (462)
T ss_pred CHHHHHHHH---HHHhc-----CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEE
Confidence 4 4444333 33221 477899999987777766788899999999874 347899999999887 78899
Q ss_pred EEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC--CCCCCcCC---CcEEEeCCcccccccCCCCCC
Q 001990 734 LMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPGYIG---ADVCHLNLHKTFCIPHGGGGP 804 (985)
Q Consensus 734 Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g--~~~~g~~g---~Di~~~s~hKtl~~p~g~GGP 804 (985)
|++++| |++|.+- ..+++|+++|+++|+++++|+++..-. .+ +.....+. .=+++.|+.|+|+. .|.
T Consensus 208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~----pGl 283 (462)
T PLN02187 208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVV----PGW 283 (462)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCC----ccc
Confidence 999999 5799986 248999999999999999999874211 11 10111111 12556777888765 488
Q ss_pred cceeeeec-cc-c---cCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHH
Q 001990 805 GMGPIGVK-KH-L---APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (985)
Q Consensus 805 g~G~l~~~-~~-l---~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a 879 (985)
++|++++. ++ + ...+.... .......+.+...+ .++.+++.....+-+.+..+...++.
T Consensus 284 RiG~~v~~~p~~~~~~~~~~~~~~------------~~~~~~~~~s~~~Q----~a~~~~L~~~~~~~l~~~~~~l~~~r 347 (462)
T PLN02187 284 KIGWIALNDPEGVFETTKVLQSIK------------QNLDVTPDPATIIQ----AALPAILEKADKNFFAKKNKILKHNV 347 (462)
T ss_pred eeEEEEecCchhHHHHHHHHHHHH------------HhccccCCCCHHHH----HHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 99999984 22 1 11111000 00000001111111 11222232212233455556667778
Q ss_pred HHHHHHHhccCCee-EcCCCCceeEEEEEEecCccccCCC-CHHHHHHH-HHHCCCccCC-CCCCCCCEEEEeccCCCCH
Q 001990 880 NYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKR-LMDYGFHGPT-MSWPVPGTLMIEPTESESK 955 (985)
Q Consensus 880 ~~l~~~L~~~~~i~-~~g~~~~~~~~~vv~~~~~~~~~g~-~~~~l~~~-L~e~Gi~~~~-~~~pv~~~lris~t~~~t~ 955 (985)
+++.+.|++...+. +..+.+..+ +.++++. ....+. +..+++.. +.++||.+.. ..|..++++||+++. .+
T Consensus 348 ~~l~~~L~~~~~~~~~~~P~gg~f--l~~~l~~-~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--~~ 422 (462)
T PLN02187 348 DLVCDRLKDIPCVVCPKKPESCTY--LLTKLEL-SLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV--EA 422 (462)
T ss_pred HHHHHHHhhCCCCcCCCCCCEeEE--EEeecCh-hhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC--CH
Confidence 88889888621111 111212111 2233320 000122 34455554 4788988643 223346899999973 57
Q ss_pred HhhchHHHHHHHHHHHHHHHHH
Q 001990 956 VCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 956 eeId~~~~~i~aL~~i~~~~~~ 977 (985)
+.++ ..++.|.++++...+
T Consensus 423 e~l~---~al~rL~~~l~~~~~ 441 (462)
T PLN02187 423 HMLE---DALERLKGFCTRHAK 441 (462)
T ss_pred HHHH---HHHHHHHHHHHHhhh
Confidence 7777 888888887765543
No 347
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.64 E-value=1.9e-14 Score=165.30 Aligned_cols=280 Identities=15% Similarity=0.148 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
.+++++.+++++|.+.. +.+++|+.+..+ ++ . .. +++|+||+++..|+.+... +...|+++++++.
T Consensus 49 ~~~le~~la~l~g~~~~-l~~~sG~~al~~-~l--~-ll-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLDKADRA-FAFSSGMAALDV-IT--R-LL-----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHH-HH--H-Hh-----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 66899999999999654 556677665422 22 1 21 4678999988777654332 3457999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||+++..+. ...|..+|+|+++
T Consensus 119 ~-----d~~~le~~i~---~~tklv~le~psnptg~v~-dl~~I~~la~~~g~~vivD~a~~~~~--~~~~l~~g~Di~v 187 (378)
T TIGR01329 119 T-----DLDKVKAALG---PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQNALVVVDNTMMSPL--LCNPLELGADIVY 187 (378)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCcccc--cCChhhcCCcEEE
Confidence 3 8999999997 88999999999 5799998 89999999999999999999985432 2345577999999
Q ss_pred eCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+|+||+++.| ++..+|++++++ .+.+.+.... ...+... .+ ..+ ++...+.+.
T Consensus 188 ~S~tK~l~G~---~~~~~G~v~~~~~~~~~~~~~~~-------------~~~G~~~-----~~---~~a--~l~~~~l~t 241 (378)
T TIGR01329 188 HSATKFLAGH---SDVMAGVLAVKGEEIAKKVYFLQ-------------NSTGSGL-----AP---FDC--WLLLRGIKT 241 (378)
T ss_pred EecceeccCC---ccceeEEEEeCcHHHHHHHHHHH-------------HhcCCcC-----CH---HHH--HHHHccCCC
Confidence 9999998522 112378888864 3333221100 0000000 01 112 233444456
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeEcCCCC------------ceeEEEEEEecCccccCCCC-HHHHHHHHHHCC
Q 001990 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVNG------------TVAHEFIVDLRGLKNTAGIE-PEDVAKRLMDYG 931 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~~---~i~~~g~~~------------~~~~~~vv~~~~~~~~~g~~-~~~l~~~L~e~G 931 (985)
+..+.++...++..+.+.|++.. .+.+++-.+ .....+.|++. +.+ ..++.+.|...+
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~------~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG------SVALSKRLVEATKLFS 315 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC------CHHHHHHHHHhCcCcc
Confidence 67777888888888999888622 233333110 01122334432 333 567888886656
Q ss_pred CccC--C----CCCC-----------------C-CCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 932 FHGP--T----MSWP-----------------V-PGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 932 i~~~--~----~~~p-----------------v-~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+.++ . +..| + ++.||+|++. ||+| .+++.|++.++
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~---dl~~dl~~al~ 374 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVD---DLISDLDIAFV 374 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHH---HHHHHHHHHHH
Confidence 5432 1 1111 1 3679999875 4555 66666666655
No 348
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.64 E-value=5.6e-14 Score=162.76 Aligned_cols=276 Identities=20% Similarity=0.176 Sum_probs=184.3
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|++.|.+. +.++.+|++++..++.++ +. +||+||++...|+.+...+...++..|++++++|. +
T Consensus 67 ~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~l-l~--~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 141 (403)
T PRK07503 67 LALLEQRMASLEGGEA--AVALASGMGAITATLWTL-LR--PGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPA 141 (403)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-cC--CCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHH
Confidence 3457789999999876 567889998877776654 33 89999999999987777666556778999999876 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|+++++| +.++.+....|..+|+|++++|. |.++++ |
T Consensus 142 ~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD-~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~---g 217 (403)
T PRK07503 142 ALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD-NTYCTPYLQRPLELGADLVVHSATKYLGGH---G 217 (403)
T ss_pred HHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEccccccccCC---C
Confidence 5555 7788999999988 78999999999999999999999995 45555555566678999999998 877632 2
Q ss_pred CCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 367 GP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
+..+|++..++++.+++.. .+ . +. ....|. +++ .|+ +...+.+-+..+
T Consensus 218 d~~gG~v~~~~~l~~~l~~--~~-------~---------------~~--~~g~~~-s~~---~a~--l~l~~L~tl~~r 265 (403)
T PRK07503 218 DITAGLVVGGKALADRIRL--EG-------L---------------KD--MTGAVM-SPF---DAF--LLMRGLKTLALR 265 (403)
T ss_pred ceeEEEEEcCHHHHHHHHh--hh-------H---------------Hh--CcCCCC-CHH---HHH--HHHcCcchHHHH
Confidence 2336888877777665410 00 0 00 001111 122 122 233444455566
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEc--CC----CC----------c-ceEEEecCC-H---HHHHHHHHH--cCceee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVEVQ--GL----PF----------F-DTVKVKCAD-A---HAIASAAYK--IEMNLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~~~--~~----~~----------~-~~~~i~~~~-~---~~l~~~L~~--~Gi~~~--- 500 (985)
.++..+++..+.+.|++++.++.+ +. +. + .-++|..++ . ..+.+.|.= .+..++
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~~~~slG~~~ 345 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFARAVSLGDAE 345 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcceeecccCCCC
Confidence 677789999999999987545422 11 11 1 236666643 2 233333321 222110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +.++.||+|++.-+.++-|+.|.++|..
T Consensus 346 sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 346 SLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred ccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 0 1246799999998877777888888864
No 349
>PLN02656 tyrosine transaminase
Probab=99.64 E-value=4.5e-14 Score=164.52 Aligned_cols=340 Identities=13% Similarity=0.083 Sum_probs=188.6
Q ss_pred cccccccceecc----cCcccccccccccccc--ccCCCCcchhhhcHHHHHHHHHHHHHHHhCC--Cccceec-ChHHH
Q 001990 589 HSMIPLGSCTMK----LNATTEMMPVTWPSFA--NIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQP-NAGAA 659 (985)
Q Consensus 589 ~~~~~lGs~~~~----~~~~~~~~~~~~~~f~--~~~p~~p~e~~~G~~~~~~el~~~la~l~G~--~~~~~~~-~sGa~ 659 (985)
..++.|+.|.+. +.........-...+. ..+.|.| .+|..++.+.+.+++...+|. +...++. +++++
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 456788877765 3333332221100010 0123333 356555555555555554443 3344444 44444
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEE
Q 001990 660 GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVT 737 (985)
Q Consensus 660 g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~ 737 (985)
|.. ++++.+. .++|+|+++++.|..+...++..|++++.++.++ ++.+|+++++++++ +++++|+++
T Consensus 108 al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~ 176 (409)
T PLN02656 108 AID---VALSMLA-----RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD---QNTVALVII 176 (409)
T ss_pred HHH---HHHHHHh-----CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEE
Confidence 442 2333221 3678999999988777666778999999999853 35799999999987 778999999
Q ss_pred cC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cCCC-CC-CcC---CCcEEEeCCcccccccCCCCCCccee
Q 001990 738 YP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SP-GYI---GADVCHLNLHKTFCIPHGGGGPGMGP 808 (985)
Q Consensus 738 ~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g~~-~~-g~~---g~Di~~~s~hKtl~~p~g~GGPg~G~ 808 (985)
+| |++|.+. .++++|+++|+++|+++++|+++..-. .+-. .+ ..+ .-=+++.|+.|+|+. .|.++|+
T Consensus 177 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~----pGlRiG~ 252 (409)
T PLN02656 177 NPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIV----PGWRLGW 252 (409)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccC----cceeEEE
Confidence 99 5799884 269999999999999999999874211 1100 01 111 112556778888755 4789999
Q ss_pred eeec--------ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q 001990 809 IGVK--------KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (985)
Q Consensus 809 l~~~--------~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~ 880 (985)
+++. ++++..+.... ......+ .....++..++....++-+.+..+...++.+
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~s------~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~ 313 (409)
T PLN02656 253 FVTTDPSGSFRDPKIVERIKKYF-------------DILGGPA------TFIQAAVPTILEQTDESFFKKTINILKQSSD 313 (409)
T ss_pred EEEeCcccccccHHHHHHHHHHH-------------hhhcCCC------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 9984 23332221000 0000011 1111112233322112335555556667778
Q ss_pred HHHHHHhccCCee-EcCCCCceeEEEEEEecCccccCCC-CHHH-HHHHHHHCCCccCCC-CCCCCCEEEEeccCCCCHH
Q 001990 881 YMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPED-VAKRLMDYGFHGPTM-SWPVPGTLMIEPTESESKV 956 (985)
Q Consensus 881 ~l~~~L~~~~~i~-~~g~~~~~~~~~vv~~~~~~~~~g~-~~~~-l~~~L~e~Gi~~~~~-~~pv~~~lris~t~~~t~e 956 (985)
++.+.|++..... ...+.+..+ +.++++.. ...+. +..+ +.+.|.++||.+... .|..++.+||+++. +++
T Consensus 314 ~~~~~L~~~~~~~~~~~p~gg~~--~w~~l~~~-~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e 388 (409)
T PLN02656 314 ICCDRIKEIPCITCPHKPEGSMA--VMVKLNLS-LLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA--DPS 388 (409)
T ss_pred HHHHHHhhCCCCcCCcCCCeEEE--EEEecchh-hcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHH
Confidence 8888887621111 111212121 23343200 00011 2434 456677889986432 23345899999984 567
Q ss_pred hhchHHHHHHHHHHHHH
Q 001990 957 CHNREDLFFQILLSLTK 973 (985)
Q Consensus 957 eId~~~~~i~aL~~i~~ 973 (985)
+++ +.++.|++++.
T Consensus 389 ~l~---eal~rl~~~~~ 402 (409)
T PLN02656 389 SLE---EALGRIKSFYL 402 (409)
T ss_pred HHH---HHHHHHHHHHH
Confidence 666 66666666544
No 350
>PRK06917 hypothetical protein; Provisional
Probab=99.64 E-value=1.5e-13 Score=161.05 Aligned_cols=342 Identities=15% Similarity=0.128 Sum_probs=205.3
Q ss_pred ccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHH
Q 001990 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (985)
Q Consensus 592 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~ 670 (985)
..||++++.+......+.. ...+.....+. .+...++.+.|++++... ...++.+||+++++++++.+|.
T Consensus 43 ~~lGh~hp~v~~Ai~~ql~-~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~ 113 (447)
T PRK06917 43 AGIGHGVKEIADAIKEQAE-EVSFVYRSQFT--------SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQ 113 (447)
T ss_pred ccCCCCCHHHHHHHHHHHh-hCcCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 3578887766655444331 11111100111 123457888899987543 2347789999999999999988
Q ss_pred HHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc------------EEEEEeCCCC-----C-------CCCHHHHHHHHH
Q 001990 671 YHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAAE 725 (985)
Q Consensus 671 ~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~------------~v~~v~~~~~-----g-------~iDle~L~~~i~ 725 (985)
|...+|.++|.+||. ...+||.+..+....|. .+..+|.... + ..|++.++++++
T Consensus 114 ~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 114 HFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 876666555677775 55799988766543321 1122221110 0 013567888887
Q ss_pred hcC-CCeEEEEEEcC-C-Ccccccc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC--------CCcEEEeCC
Q 001990 726 ANR-DNLSTLMVTYP-S-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (985)
Q Consensus 726 ~~~-~~t~~Vvi~~p-n-~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~ 791 (985)
++. +++++|+++-. . ..|++.+ -+++|.++|+++|+++|+|+++. |+.+.|.+ .+|++++
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t----GfGRtG~~~a~~~~gv~PDi~~~-- 267 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT----GLGRTGAMFAMEHWGVEPDIMTL-- 267 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh----CcCcccchhhHHhcCCCCCEEEe--
Confidence 553 47888888742 2 2345542 38999999999999999999873 34344432 2798876
Q ss_pred cccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHH
Q 001990 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (985)
Q Consensus 792 hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~ 870 (985)
.|.++ +|- | +|.+.+++++.+.+.... + .....+++.|+++.++++.+.|..+..+++.
T Consensus 268 gK~l~----~G~~P-i~a~~~~~~i~~~~~~~~-~-------------~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~- 327 (447)
T PRK06917 268 GKGLG----AGYTP-IAATVVSDRVMEPILRGS-R-------------SIMSGHTLSANPLSAATALAVLEYMEKHNLP- 327 (447)
T ss_pred eehhc----cCCcc-eEEEEEcHHHHHHHhccC-c-------------ccccccCCCCCHHHHHHHHHHHHHHHHCCHH-
Confidence 37763 332 5 566777777665442100 0 0000112445677778888888888666543
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecC-ccccCC-----CCHHHHHHHHHHCCCccCCCC-
Q 001990 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNTAG-----IEPEDVAKRLMDYGFHGPTMS- 938 (985)
Q Consensus 871 ~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~-~~~~~g-----~~~~~l~~~L~e~Gi~~~~~~- 938 (985)
++..++.++|++.|++. ++++ ..|. +. + +-+.+.. -..... .....+.+.|.++|+++....
T Consensus 328 --~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-~--~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~ 401 (447)
T PRK06917 328 --EKAAEKGEYLIKGLQKVQQQSTIIGDVRGK-GL-L--IGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVA 401 (447)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCEEEEeec-ce-E--EEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccc
Confidence 46667778888888752 3322 1121 11 1 2222210 000000 013567788899999874221
Q ss_pred ---CCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 939 ---WPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 939 ---~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
-+..+.+|++|...+|++||| +++++|.++++++.+
T Consensus 402 ~~~g~~~~~i~l~Ppl~it~~eid---~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 402 GQDGKEGDAVIIAPPMTITYSELD---ELLSIFAKSVEEMMQ 440 (447)
T ss_pred ccCCCCCCEEEEECCCcCCHHHHH---HHHHHHHHHHHHHHH
Confidence 011468999999999999999 999999999887644
No 351
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.64 E-value=9.6e-14 Score=161.83 Aligned_cols=296 Identities=12% Similarity=0.148 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
..++.+.|++++... ...++.+||+++++++++.+|.| +++.+||. ..++||.....+...|.
T Consensus 85 ~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 158 (421)
T PRK09792 85 YVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGF 158 (421)
T ss_pred HHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCCcccccCC
Confidence 346777888887532 23467789999999999988875 34556665 66799987655443221
Q ss_pred -----EEEEEeCCCC--C---CCCHHHHHHHHHh--cCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEE
Q 001990 703 -----KIVSVGTDAK--G---NINIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMD 766 (985)
Q Consensus 703 -----~v~~v~~~~~--g---~iDle~L~~~i~~--~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD 766 (985)
.+..+|+..+ + ..|++++++.+++ ..+++++|+++-. +..|+..++ +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK09792 159 GPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIAD 238 (421)
T ss_pred CCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1333444221 1 1245788888864 2357888877643 356765434 999999999999999999
Q ss_pred ccccccccCCCCCC------cC--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCC
Q 001990 767 GANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 767 ~a~~~~~~g~~~~g------~~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
+++. ++.+.| .+ .+|++++ .|+++ ||..+|++++++++.+.+.....
T Consensus 239 Ev~t----g~gr~G~~~a~~~~~~~pDi~t~--gK~l~-----~G~pigav~~~~~i~~~~~~~~~-------------- 293 (421)
T PRK09792 239 EVQS----GFARTGKLFAMDHYADKPDLMTM--AKSLA-----GGMPLSGVVGNANIMDAPAPGGL-------------- 293 (421)
T ss_pred cccc----CCCCCCchhHHHhcCCCCcEEEe--ehhhc-----CCCceEEEEEcHHHHhccCCCCc--------------
Confidence 9874 222222 12 3687655 48874 34568888888887765432110
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCeeEcCCCCceeEEEEEEecCccc-
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPILFRGVNGTVAHEFIVDLRGLKN- 914 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~~~g~~~~~~~~~vv~~~~~~~- 914 (985)
.+++.|++..++++.+.+..+.++.+ .++..+..+++.+.|++ .++..........+ +.+.+..-..
T Consensus 294 ----~~T~~gnpl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~--~~ie~~~~~~~ 364 (421)
T PRK09792 294 ----GGTYAGNPLAVAAAHAVLNIIDKESL---CERANQLGQRLKNTLIDAKESVPAIAAVRGLGSM--IAAEFNDPQTG 364 (421)
T ss_pred ----CCCCCCCHHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhCCCcceecccceE--EEEEecCCccC
Confidence 01233456666667777777755433 33444566677766654 22221111110111 2333321000
Q ss_pred -cCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 915 -TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 915 -~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
........+.+.+.++|+.+.... +..+.||+.|+...|++||| +++++|.+++.
T Consensus 365 ~~~~~~~~~l~~~~~~~Gv~i~~~g-~~~~~irl~P~l~i~~~ei~---~~~~~l~~~l~ 420 (421)
T PRK09792 365 EPSAAIAQKIQQRALAQGLLLLTCG-AYGNVIRFLYPLTIPDAQFD---AAMKILQDALS 420 (421)
T ss_pred CcchHHHHHHHHHHHHCCcEEeecC-CCCCEEEEeCCCcCCHHHHH---HHHHHHHHHHh
Confidence 000124668888899999874211 22488999999999999999 99999988763
No 352
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.64 E-value=5e-14 Score=160.74 Aligned_cols=227 Identities=19% Similarity=0.117 Sum_probs=155.1
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEe-Cchhhh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-DLKDID 292 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~-~~~~l~ 292 (985)
.++++.+|++.|.+. +..+.+|++++.+++..+ . +||+||++...+......+.......++++.+. |+++++
T Consensus 57 ~~le~~lA~leg~~~--~v~~~sG~aAi~~~l~~l--~--~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~ 130 (364)
T PRK07269 57 AKLEETLAAIESADY--ALATSSGMSAIVLAFSVF--P--VGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELI 130 (364)
T ss_pred HHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHh--C--CCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHH
Confidence 457789999999765 788999998887766432 3 899999999888766655544333346665544 467787
Q ss_pred c-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCCc
Q 001990 293 Y-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPH 369 (985)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP~ 369 (985)
+ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|-++|+||+++|+ |.++++-. --
T Consensus 131 ~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD-~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d---~~ 206 (364)
T PRK07269 131 AAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD-NTFYSPIYQRPIELGADIVLHSATKYLSGHND---VL 206 (364)
T ss_pred HhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEecCceeccCCCc---cc
Confidence 7 8889999999998 67999999999999999999999995 34455555677789999999998 87864321 11
Q ss_pred eEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHH
Q 001990 370 AAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (985)
Q Consensus 370 ~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~ 448 (985)
.|+++++ +++.+++- ..+...| .| .+++ .| |+...+-+-++.+.+
T Consensus 207 gG~v~~~~~~l~~~~~-------------------------~~~~~~G---~~-~s~~---~a--~l~~~~L~tL~~r~~ 252 (364)
T PRK07269 207 AGVVVTNDLELYEKLF-------------------------YNLNTTG---AV-LSPF---DS--YLLMRGLKTLSLRME 252 (364)
T ss_pred ceEEEeCcHHHHHHHH-------------------------HHHHHhC---CC-CCHH---HH--HHHHcCCCcHHHHHH
Confidence 3566665 34443320 0000011 11 0122 12 235566667888888
Q ss_pred HHHHHHHHHHHHHhcCCCEE-EcCCCCcceEEEecCC
Q 001990 449 RVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCAD 484 (985)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~~-~~~~~~~~~~~i~~~~ 484 (985)
+..+++.+++++|++..++. ++-++....++|...+
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~ 289 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVAD 289 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECC
Confidence 89999999999999875443 3323333456665544
No 353
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.64 E-value=3e-14 Score=163.20 Aligned_cols=209 Identities=17% Similarity=0.108 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.++||..|+.+++.++. .++|+||+++..|+..... +...|+++..++.
T Consensus 52 ~~~lE~~lA~l~g~~~~-~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 52 HFALQDAMCELEGGAGC-YLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred HHHHHHHHHHHhCCCcE-EEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 45789999999998765 456677776655544432 4778999988755433221 3457888888764
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ +.++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||++|..+. +..|.++|+|+++
T Consensus 123 ~-----~~e~l~~~i~---~~tklV~lesp~Np~g~~~-dl~~I~~la~~~g~~livD~t~a~g~--~~~pl~~gaDivv 191 (377)
T TIGR01324 123 L-----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQ-DIPAIAKAARNPGIVIMIDNTWAAGL--LFKPLEHGVDISI 191 (377)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcccc--ccCccccCceEEE
Confidence 3 3388998887 78999999998 5789887 89999999999999999999986543 3457789999999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|+||+++.+ ++-.+|+++++++....+.... ...+... ....||..++. .+.+
T Consensus 192 ~S~tK~l~G~---~d~~gG~v~~~~~~~~~l~~~~-------------~~~G~~l--------~p~~a~~~~rg--l~tl 245 (377)
T TIGR01324 192 QAGTKYLVGH---SDIMIGTVVANARTWDQLREHS-------------YLMGQMV--------DADDAYTTLRG--LRTL 245 (377)
T ss_pred ecCceeccCC---CCceEEEEEeCHHHHHHHHHHH-------------HHhCCCC--------CHHHHHHHHhh--hhhH
Confidence 9999999532 2234678888765543322100 0001111 11224444433 3445
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 001990 869 TEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~ 888 (985)
..+.++..+++..+++.|++
T Consensus 246 ~~R~~~~~~~a~~la~~L~~ 265 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSE 265 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 55677888888889999986
No 354
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.64 E-value=3.5e-14 Score=145.63 Aligned_cols=302 Identities=16% Similarity=0.180 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC--C
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--A 711 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~--~ 711 (985)
+.++.+.+++++|+|.+.+ +++.-.+-++++.++. .++|-|++...+|-+..-+++..|++|..||.. +
T Consensus 63 I~~F~~dlaeFlg~D~~R~-t~GARe~KfavMhal~--------~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRV-TAGAREAKFAVMHALC--------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHhCCceeee-cccchhhHHHHHHHhc--------cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 5567777999999998643 3333345556555443 367889999999988777889999999999954 3
Q ss_pred CCCCCHHHHHHHHHhc----CCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcE
Q 001990 712 KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~----~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di 786 (985)
+..+++|...+.|++. ++.+++.++++|. .+|.+. |.++++++|+++|+++++.+|+..+.... +..+.|+|+
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~-Dakkva~ic~e~gvPlllN~AYt~Grmpv-s~ke~g~DF 211 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA-DAKKVAKICREYGVPLLLNCAYTVGRMPV-SGKEIGADF 211 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch-hhHHHHHHHHHcCCceEeecceeeccccc-cccccCCCE
Confidence 4789999988888653 2457788889995 689997 99999999999999999999987665543 345789999
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCC-CCCCcccccchhhhHHHHHHHHHHHhc-
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ-PLGTIAAAPWGSALILPISYTYIAMMG- 864 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~-~t~~i~s~~~g~~~~~~~A~a~l~~lg- 864 (985)
+++|+||+++. .|| +|++..++++.+..-.+. |.. . ...+- -.+ |+ ..|.+..-. |+.+-
T Consensus 212 iVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~r~S-g~~---~-~~KEvellG--CT-~rGapivTl-----mASfP~ 273 (382)
T COG1103 212 IVGSGHKSMAA----SAP-IGVLAMSEEWAEIVLRRS-GRA---F-PKKEVELLG--CT-VRGAPIVTL-----MASFPH 273 (382)
T ss_pred EEecCccchhc----cCC-eeEEeehhHHHHHHHhhc-ccc---c-ccceeeeec--cc-ccCchHHHH-----HhcCHH
Confidence 99999999974 355 788999987765431110 000 0 00000 011 22 122222111 11110
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEE-EEEecCc---cccCCCCHHHHHHHHHHCCCccCCC
Q 001990 865 -SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEF-IVDLRGL---KNTAGIEPEDVAKRLMDYGFHGPTM 937 (985)
Q Consensus 865 -~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~-vv~~~~~---~~~~g~~~~~l~~~L~e~Gi~~~~~ 937 (985)
.+- ....+...++++++.+.|+++ +..+ |. .|..|.. -|..+.| .+.......-+.+.|.++||+.-
T Consensus 274 V~eR-VkrWdeEv~kaR~fv~elEkigg~~ql--G~-rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI-- 347 (382)
T COG1103 274 VVER-VKRWDEEVEKARWFVAELEKIGGVKQL--GE-RPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI-- 347 (382)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHh--CC-CCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc--
Confidence 011 123345578899999999872 3222 21 1222222 1222211 01111234457778888888742
Q ss_pred CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 938 SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 938 ~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.......+-+| ++.-+.|+++ ..++++++|+++
T Consensus 348 ~~G~Tk~~K~s-vyGl~~Eqve---~V~~afkeI~ek 380 (382)
T COG1103 348 QPGQTKYFKLS-VYGLSWEQVE---YVVDAFKEIAEK 380 (382)
T ss_pred ccCceeEEEEE-eecCCHHHHH---HHHHHHHHHHHh
Confidence 11112345555 3567999999 999999999875
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.64 E-value=2.7e-14 Score=170.92 Aligned_cols=272 Identities=14% Similarity=0.113 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..+.++|+.+|+++|++.+.+ +++|+|++..+++++.. . +||+||+++++|.|+...+. ..|+..+++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~~aLi----lsga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYI-VTNGTSTSNKIVGMYAA-P--AGSTLLIDRNCHKSLAHLLM----MSDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCChHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeeEEecccc
Confidence 457889999999999998766 77888988888888763 3 89999999999999998764 35888888743
Q ss_pred ----------------hhhhc-c--CCCE---eEEEEEcCCCCeeeccHHHHHHHHHhCCcEE-EEEecccc-----ccC
Q 001990 289 ----------------KDIDY-K--SGDV---CGVLVQYPGTEGEVLDYGDFIKNAHANGVKV-VMATDLLA-----LTI 340 (985)
Q Consensus 289 ----------------~~l~~-l--~~~t---~~V~v~~pn~~G~i~dl~~I~~~a~~~gall-iV~a~~~a-----lg~ 340 (985)
+.+++ + .++. +++++|+|||.|.+.|+++|++++ |+.+ +|| .+|. ...
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvD-EAhgah~~F~p~ 342 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFD-SAWVPYTHFHPI 342 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEe-ccchhhhhcCcc
Confidence 23333 3 2333 689999999999999999999999 6666 573 2221 111
Q ss_pred CC--CCCcc--cceEE---EecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccccccc
Q 001990 341 LK--PPGEL--GADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (985)
Q Consensus 341 l~--~p~~~--GaDi~---v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~r 412 (985)
++ .+-.. |+|.+ +.|. |.|++ ++ ++++++++.. + + +.|
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~a-lT----QaS~iHvk~~----v---------d----------------~~~ 388 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAA-FS----QASLIHIKGE----Y---------D----------------EET 388 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccc-cc----hheeeeecCC----C---------C----------------HHH
Confidence 22 12122 68888 8888 66653 22 4678877532 1 0 000
Q ss_pred ccccCCCccchhHHHHHHHHHH--HHHcC-cchHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCC-----------
Q 001990 413 RDKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGL----------- 472 (985)
Q Consensus 413 re~atsni~t~~~l~a~~aa~y--~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~g~------~~~~~~----------- 472 (985)
...+-.-.-|+++.|.++|++- ..++. +.| +++.++..+++..+|+.|.++.+ |+++++
T Consensus 389 ~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l 467 (713)
T PRK15399 389 FNEAFMMHTSTSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPV 467 (713)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceec
Confidence 0111112235588899999983 22332 344 56778888999999999988754 455421
Q ss_pred ----C------------Ccce--EEEecC-----------C--HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHH
Q 001990 473 ----P------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVD 521 (985)
Q Consensus 473 ----~------------~~~~--~~i~~~-----------~--~~~l~~~L~~~Gi~~~~~~~~~lris~~~~~t~edid 521 (985)
. ..++ +++.++ + +..+.+.|+++||.++..+...+++.++..+|+++++
T Consensus 468 ~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~ 547 (713)
T PRK15399 468 APGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAM 547 (713)
T ss_pred CCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHH
Confidence 0 1243 455443 3 7789999999999999988899999999999999999
Q ss_pred HHHHHHhC
Q 001990 522 KLFIVFAG 529 (985)
Q Consensus 522 ~ll~~l~~ 529 (985)
+|+++|..
T Consensus 548 ~L~~aL~~ 555 (713)
T PRK15399 548 GLLRGLTE 555 (713)
T ss_pred HHHHHHHH
Confidence 99999974
No 356
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=4.2e-14 Score=162.36 Aligned_cols=212 Identities=17% Similarity=0.207 Sum_probs=150.3
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|++.|.+. +.++.+|++++.+++.. .. +||+||+++..|++....+...++.+|+++++++. +
T Consensus 52 ~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~~~--l~--~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 125 (377)
T PRK07671 52 RAALEELIAVLEGGHA--GFAFGSGMAAITAVMML--FS--SGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLE 125 (377)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHH--hC--CCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHH
Confidence 4567899999999876 56788888877654432 22 89999999999998887776666778999999875 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +..+.+....|.++|+|++++|. |++++|.+.
T Consensus 126 ~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD-~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~- 203 (377)
T PRK07671 126 EVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD-NTFMTPYWQSPISLGADIVLHSATKYLGGHSDV- 203 (377)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCeEEEecCcccccCCccc-
Confidence 5666 7889999999998 68999999999999999999999995 34454555567789999999998 887654211
Q ss_pred CCceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
-.|++.+++ ++.+++. ..|..-| .. ..+. ..|+...+.+-+..
T Consensus 204 --~~G~~v~~~~~l~~~~~-------------------------~~~~~~g--~~--~~~~-----~a~l~~~~l~tl~~ 247 (377)
T PRK07671 204 --VAGLVVVNSPELAEDLH-------------------------FVQNSTG--GI--LGPQ-----DSWLLLRGLKTLGI 247 (377)
T ss_pred --eeEEEEeCcHHHHHHHH-------------------------HHHHhhc--CC--CCHH-----HHHHHHcCcChHHH
Confidence 246666643 4443330 0000000 00 0111 11234455556677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
..++..+++.++.++|++..++.
T Consensus 248 R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 248 RMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHcCCCee
Confidence 77888899999999999875454
No 357
>PLN00144 acetylornithine transaminase
Probab=99.63 E-value=7.9e-14 Score=160.56 Aligned_cols=288 Identities=17% Similarity=0.199 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCC-------CCEEEE-cCCCCCCcHHHHHhcCc---
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHH-------RNVCII-PVSAHGTNPATAAMCGM--- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~-------~~~Vlv-~~~~Hg~~~~~~~~~G~--- 702 (985)
..++.+.|+++.+.+. .++.+||++++++++..+|.|...++..+ +.+||. ...+||....+....+-
T Consensus 59 ~~~la~~l~~~~~~~~-v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~ 137 (382)
T PLN00144 59 QVELAKRLVASSFADR-VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQY 137 (382)
T ss_pred HHHHHHHHHhcCCCCe-EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccc
Confidence 3467788888776553 47789999999999999998754333211 355664 66899987666543221
Q ss_pred ---------EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc-cC--HHHHHHHHHHcCCEEEEEccc
Q 001990 703 ---------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE-EG--IDEICKIIHDNGGQVYMDGAN 769 (985)
Q Consensus 703 ---------~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~-~d--i~eI~~la~~~g~lliVD~a~ 769 (985)
.+..+|. .|++++++.+. .+++++|+++-. +..|++. ++ +++|.++|++||+++|+|+++
T Consensus 138 ~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~ 210 (382)
T PLN00144 138 RTPFEPLMPGVTFVEY-----GNLEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ 210 (382)
T ss_pred cccCCCCCCCeEEeCC-----CCHHHHHHhcC--CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 1333443 27999999885 256777776532 3445554 23 899999999999999999987
Q ss_pred cccccCCCCC-----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCccc
Q 001990 770 MNAQVGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (985)
Q Consensus 770 ~~~~~g~~~~-----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s 844 (985)
. +++-...+ ....+|++++ .|.++ +|-.+|++++++++.+.+..... + +
T Consensus 211 t-g~gr~g~~~~~~~~~~~PDi~t~--sK~l~-----~G~pig~v~~~~~~~~~~~~~~~-------------~-----~ 264 (382)
T PLN00144 211 C-GLGRTGYLWAHEAYGVEPDIMTL--AKPLA-----GGLPIGAVLVTEKVASAINPGDH-------------G-----S 264 (382)
T ss_pred h-CCCccchHhhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhccCCCCC-------------C-----C
Confidence 3 22111101 1234687665 48774 34568889998887765532110 0 1
Q ss_pred ccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccccCCCC
Q 001990 845 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE 919 (985)
Q Consensus 845 ~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~~ 919 (985)
++.++++.++++.+.|..+...++. ++.....+++++.|++. .+.. +.+ .+. + +-+.+. .+
T Consensus 265 T~~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~-~--~~l~l~-------~~ 330 (382)
T PLN00144 265 TFAGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGL-L--VGIQLD-------VP 330 (382)
T ss_pred CCCCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeec-Cce-E--EEEEec-------Cc
Confidence 1223556666677777777554444 34445555666655531 2111 112 121 1 222222 23
Q ss_pred HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 920 PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 920 ~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
...+.+.+.++|+.+..... .+.||++|+...|++|++ .+++.|.+++.+
T Consensus 331 ~~~~~~~~~~~Gv~i~~~~~--~~~lrl~p~~~~~~~~i~---~~~~~l~~~l~~ 380 (382)
T PLN00144 331 AGPLVDACRDSGLLVLTAGK--GDVVRLVPPLVISEAELE---QAVEILADCLPA 380 (382)
T ss_pred cHHHHHHHHHCCeEEeecCC--CCEEEEeCCCccCHHHHH---HHHHHHHHHHHh
Confidence 46789999999998753321 378999999989999999 999999988764
No 358
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=1.2e-13 Score=162.27 Aligned_cols=295 Identities=14% Similarity=0.139 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHhCCC-----ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC------
Q 001990 634 FNNLGEWLCTITGFD-----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------ 701 (985)
Q Consensus 634 ~~el~~~la~l~G~~-----~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G------ 701 (985)
..++.+.+++++..+ ...++.+||++++++++..+|.| +++.+||. ..++||....++...|
T Consensus 108 ~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 108 KDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTA------TGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred HHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHh------hCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 345667777776422 22233479999999999988876 24556665 6689998766554222
Q ss_pred ------cEEEEEeCCCCCC------------CCHHHHHHHHHhcC---CCeEEEEEEcC-CCcccccc---CHHHHHHHH
Q 001990 702 ------MKIVSVGTDAKGN------------INIEELRKAAEANR---DNLSTLMVTYP-STHGVYEE---GIDEICKII 756 (985)
Q Consensus 702 ------~~v~~v~~~~~g~------------iDle~L~~~i~~~~---~~t~~Vvi~~p-n~~G~i~~---di~eI~~la 756 (985)
-.+..+|.....+ .+++.+++.+++.. +++++|+++-. ...|++.+ -++++.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 1234454422111 23678888886432 36888888642 34566652 389999999
Q ss_pred HHcCCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCC
Q 001990 757 HDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (985)
Q Consensus 757 ~~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~ 828 (985)
+++|+++|+|+++ .|+.+.|.+ -+|++++ .|.+ ++|-| +|.+++++++ ..+....
T Consensus 262 ~~~giLlI~DEV~----tGfGRtG~~~a~e~~gv~PDiv~~--gKgl----ggG~P-lsAv~~~~~~-~~~~~~~----- 324 (464)
T PRK06938 262 EEAGIPLIVDEIQ----SGFGRTGKMFAFEHAGIIPDVVVL--SKAI----GGSLP-LAVVVYREWL-DTWQPGA----- 324 (464)
T ss_pred HHcCCEEEEeccc----cCCCcCcHHHHHHhcCCCCCEEEe--eccc----cCCCc-eEEEeehhHh-hccCCCC-----
Confidence 9999999999886 344445432 2799876 3766 44444 6666677664 3221100
Q ss_pred CCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeE
Q 001990 829 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAH 903 (985)
Q Consensus 829 ~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~ 903 (985)
..+++.|+++.++++.+.|..+.++++. ++..+..++|.++|++. ++++ +.|. + .+
T Consensus 325 -------------~~~T~~gnpla~Aaa~a~L~~l~~~~l~---~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-G-lm- 385 (464)
T PRK06938 325 -------------HAGTFRGNQMAMAAGSATLRYIKEHRLA---EHAAAMGERLREHLRQLQRDYPQLGDVRGR-G-LM- 385 (464)
T ss_pred -------------CCCCCCcCHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHhCCCeeeeecc-c-eE-
Confidence 1123446777788888889888766544 45566677888888652 3322 1221 1 22
Q ss_pred EEEEEecCcccc------CC---CCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 904 EFIVDLRGLKNT------AG---IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 904 ~~vv~~~~~~~~------~g---~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+-+.+..-+.. .. .-...+...+.++|+.+.... +..+.||+.|+..+|++||| ++++++.+++.+
T Consensus 386 -~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~~~~l~~~Ppl~it~~eid---~~~~~l~~~l~~ 460 (464)
T PRK06938 386 -LGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG-RHGSVVRFLPPLIITAEQID---EVAEIFAEAVAA 460 (464)
T ss_pred -EEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEECCCccCHHHHH---HHHHHHHHHHHH
Confidence 22222100000 00 013457778889999874321 12478999999999999999 999999998876
Q ss_pred H
Q 001990 975 T 975 (985)
Q Consensus 975 ~ 975 (985)
+
T Consensus 461 ~ 461 (464)
T PRK06938 461 A 461 (464)
T ss_pred H
Confidence 4
No 359
>PLN02242 methionine gamma-lyase
Probab=99.63 E-value=4.5e-14 Score=163.84 Aligned_cols=217 Identities=18% Similarity=0.148 Sum_probs=154.2
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHh-hcCCCeEEEEeCc---
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDL--- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~-a~~~gi~v~~~~~--- 288 (985)
..++++.+|+++|.+. +.++.+|++++.++++++. . +||+||++...|+.+...+... .+..|+++++++.
T Consensus 78 ~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al~-~--~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~ 152 (418)
T PLN02242 78 VLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQLC-S--SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDL 152 (418)
T ss_pred HHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh-C--CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCH
Confidence 4557899999999987 5678999998888777652 3 8999999999998887766433 3347999888765
Q ss_pred hhhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCC
Q 001990 289 KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 364 (985)
Q Consensus 289 ~~l~~-l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~ 364 (985)
+++++ +++ +|++|++.+| |++|.+.|+++|+++||++|++++|| +.++. +...+.++|+||+++|. |.++++
T Consensus 153 e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD-ea~~~-~~~~~~~~g~divv~S~SK~l~g~-- 228 (418)
T PLN02242 153 EAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD-NTFAP-MVLSPARLGADVVVHSISKFISGG-- 228 (418)
T ss_pred HHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE-CCCCc-cCCCHHHcCCcEEEEeCccccCCC--
Confidence 45655 777 4999999998 78999999999999999999999995 44442 23456778999999998 888642
Q ss_pred CCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHH
Q 001990 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (985)
Q Consensus 365 ~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (985)
|..-.|++++++++++.+.... . . + ....|. .+....|.+ ...+.+-+.
T Consensus 229 -g~~~gG~iv~~~~li~~l~~~~----------~-----------~-~----~~~~g~--~~~~~~A~l--~~~~l~tl~ 277 (418)
T PLN02242 229 -ADIIAGAVCGPAELVNSMMDLH----------H-----------G-A----LMLLGP--TMNPKVAFE--LSERLPHLS 277 (418)
T ss_pred -CCceEEEEEcCHHHHHHHHHHh----------h-----------h-h----hhccCC--CCCHHHHHH--HHcCCCcHH
Confidence 2233588888887766541000 0 0 0 000110 111112222 344555667
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEc
Q 001990 445 TIAQRVHGLAGTFALGLKKLGTVEVQ 470 (985)
Q Consensus 445 ~i~~~~~~~a~~l~~~L~~~g~~~~~ 470 (985)
.+.++..+++.++++.|++++ +++.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~-~~V~ 302 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CEEE
Confidence 777888999999999999997 7775
No 360
>PRK07481 hypothetical protein; Provisional
Probab=99.63 E-value=1.2e-13 Score=161.90 Aligned_cols=306 Identities=17% Similarity=0.158 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhC---CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc-------
Q 001990 634 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G---~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~------- 702 (985)
..++.+.|+++++ ++ ..++.+||+++++++++.+|.|...+|..++.+||. ...+||....+....|-
T Consensus 88 ~~~lae~L~~~~~~~~~~-~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~ 166 (449)
T PRK07481 88 AIELSYELIDMFAPEGMR-RVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNY 166 (449)
T ss_pred HHHHHHHHHHhcCCCCCC-EEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccccccc
Confidence 4578888988874 23 347789999999999999998865555434566665 66899977554332110
Q ss_pred -----EEEEEeCCCC-----CCCCHHHH--------HHHHH-hcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHc
Q 001990 703 -----KIVSVGTDAK-----GNINIEEL--------RKAAE-ANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDN 759 (985)
Q Consensus 703 -----~v~~v~~~~~-----g~iDle~L--------~~~i~-~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~ 759 (985)
.+..++.+.. +..|++++ +++|. ++++++++|+++-. ...|.+.++ ++++.++|+++
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~ 246 (449)
T PRK07481 167 EPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH 246 (449)
T ss_pred CCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc
Confidence 1222332110 01244443 44443 23467889888753 345666522 99999999999
Q ss_pred CCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCC
Q 001990 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (985)
Q Consensus 760 g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~ 831 (985)
|+++|+|+++. |+.+.|.+ -+|++++ .|.++ +|---+|.+++++++.+.+..... .
T Consensus 247 g~llI~DEV~t----GfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~---~--- 310 (449)
T PRK07481 247 GILLIADEVVT----GFGRTGSWFGSRGWGVKPDIMCL--AKGIT----SGYVPLGATMVNARIADAFEANAD---F--- 310 (449)
T ss_pred CCEEEEeehhh----CcCcCchhhHhhhcCCCCCEEEE--eeccc----CCCcCceEEEEcHHHHHHHhccCc---c---
Confidence 99999999863 34344321 3799876 37763 332126667778776654421100 0
Q ss_pred CCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEE
Q 001990 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (985)
Q Consensus 832 ~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~v 906 (985)
.+.....+++.|+++.++++.+.|..+.++++. ++..+..++|++.|++. ++++ ..|. + .+ +-
T Consensus 311 -----~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-G-lm--~g 378 (449)
T PRK07481 311 -----GGAIMHGYTYSGHPVACAAALATLDIVVREDLP---ANAAKRGAYLLEGLQPLKERFELVGDVRGK-G-LM--LA 378 (449)
T ss_pred -----ccccccCCCCCCCHHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHHHhhcCCCeEEEeec-c-eE--EE
Confidence 000001123446777788888888888766543 45566678888888652 2322 1121 1 11 22
Q ss_pred EEecCcc-ccCCC-----CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 907 VDLRGLK-NTAGI-----EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 907 v~~~~~~-~~~g~-----~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+.+..-. ..... ....+.+.|.++|+++... .+.+|++|...+|++||| +++++|.++++++
T Consensus 379 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----g~~i~l~Ppl~it~~eid---~~~~~l~~~l~~~ 446 (449)
T PRK07481 379 LDLVADKATREPIDPSKGYANAVADVARENGVLVRPS----GTKIILSPPLVIQREDVD---RIVDALDAGLSAV 446 (449)
T ss_pred EEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----CCEEEEECCCCCCHHHHH---HHHHHHHHHHHhc
Confidence 2221000 00001 1346777888999987432 356899999999999999 9999999988764
No 361
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.63 E-value=3.2e-14 Score=170.49 Aligned_cols=309 Identities=13% Similarity=0.082 Sum_probs=172.8
Q ss_pred hhcHHHHHHHHHHHHHHHh--CCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 627 AQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~--G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
.+|..++.+.+.+++.+.. +.+..+++.++|++. +..++++.+. .++|+|+++.+.|..+...+++.|.++
T Consensus 184 ~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~e--al~~~~~~l~-----~~Gd~Vli~~P~y~~y~~~~~~~g~~~ 256 (517)
T PRK13355 184 SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSE--LINLSMSALL-----DDGDEVLIPSPDYPLWTACVNLAGGTA 256 (517)
T ss_pred CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHH--HHHHHHHHhC-----CCCCEEEEcCCCCcCHHHHHHHCCCEE
Confidence 4675555544444443322 345555555555541 2223333321 477899999998888877788999999
Q ss_pred EEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC--C
Q 001990 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--L 776 (985)
Q Consensus 705 ~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g--~ 776 (985)
+.++++++ +.+|+++++++++ +++++|++++| |++|.+- ..+++|+++|++||+++++|+++..-. .+ .
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~ 333 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEH 333 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCc
Confidence 99988654 6799999999997 78999999999 5799886 138999999999999999999874211 11 1
Q ss_pred CCCCcCCCcE--E-EeCCcccccccCCCCCCcceeeeec--ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 TSPGYIGADV--C-HLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 ~~~g~~g~Di--~-~~s~hKtl~~p~g~GGPg~G~l~~~--~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
.....+..|+ + +.|+.|+|++ .|+++|++++. +++...+...+ .. ......+.+..++.
T Consensus 334 ~s~~~~~~~~~vi~~~S~SK~~~~----~G~RiG~~i~~~~~~~~~~~~~~l-~~----------~~~~~~~~~~~~q~- 397 (517)
T PRK13355 334 TSIASLAPDLFCVTFSGLSKSHMI----AGYRIGWMILSGNKRIAKDYIEGL-NM----------LANMRLCSNVPAQS- 397 (517)
T ss_pred ccHHHhCCCCeEEEEecchhhccC----cccceEEEEeeCchhhHHHHHHHH-HH----------HhcCcCCcChHHHH-
Confidence 1111222242 2 3667787754 58899999854 33211100000 00 00000111111121
Q ss_pred HHHHHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHH-HHH
Q 001990 852 ILPISYTYIAMMGSKG---LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRL 927 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~g---l~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~-~~L 927 (985)
++..+|. +.+. +.+..++..++.+++.+.|++...+.+..+++.++ +.++++. ......+..+++ +.|
T Consensus 398 ---a~~~aL~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy--~~~~l~~-~~~~~~~~~~~~~~ll 469 (517)
T PRK13355 398 ---IVQTALG--GHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFY--IFPKIDV-KKFNIHDDEQFALDLL 469 (517)
T ss_pred ---HHHHHhc--CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeE--EEeecCc-ccCCCCCHHHHHHHHH
Confidence 1112221 1111 11112334555678888887621222222323222 2234431 000001334444 556
Q ss_pred HHCCCccCC-CCC--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 928 MDYGFHGPT-MSW--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 928 ~e~Gi~~~~-~~~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.++||.+.. ..| +.++.+|+++. .++++++ ..++.|++.++.
T Consensus 470 ~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~---~a~~rl~~~~~~ 514 (517)
T PRK13355 470 HDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLE---DAMDRLADFFSY 514 (517)
T ss_pred HhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHH---HHHHHHHHHHHH
Confidence 788998633 223 23589999984 5677777 777777776654
No 362
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.63 E-value=1.2e-13 Score=159.70 Aligned_cols=298 Identities=12% Similarity=0.110 Sum_probs=177.7
Q ss_pred hcHHHHHHHHHHHHHHHhCC--CccceecChHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~~~~sGa-~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+.+|. +..++..++|+ +|. .++++.+. .++++|+++.+.|..+...++..|.++
T Consensus 66 ~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al---~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 137 (384)
T PRK06348 66 GGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGM---YLALQSIL-----DPGDEVIIHEPYFTPYKDQIEMVGGKP 137 (384)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHH---HHHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEE
Confidence 56555555556666555554 44455554454 443 23333321 467899999998877777788899999
Q ss_pred EEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccccC--CC
Q 001990 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG--LT 777 (985)
Q Consensus 705 ~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~g--~~ 777 (985)
+.++.++ ++.+|+++|+++++ +++++|++++| |++|.+. +++++|.++|+++|+++++|+++..-... ..
T Consensus 138 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 138 IILETYEEDGFQINVKKLEALIT---SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEecCCcCcCCcCCHHHHHHhhC---cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 9998742 35699999999987 67888999999 5799886 24899999999999999999987421111 00
Q ss_pred CCCc----CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHH
Q 001990 778 SPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 778 ~~g~----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
.... .+-.+++.|+.|+|+.| |.++|++.+++++...+.... .....+.+..++
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~q---- 272 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMT----GWRIGYVIAPDYIIETAKIIN--------------EGICFSAPTISQ---- 272 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCc----cccceeeecCHHHHHHHHHHH--------------HhccCCCCHHHH----
Confidence 1011 12236677888887543 678999999877655432100 000111111111
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCC
Q 001990 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (985)
Q Consensus 854 ~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi 932 (985)
.++..++.. ..+-+++..+...++.+++.+.|++...+.+..+++.++ +.++++. .+.+..++++.|. ++||
T Consensus 273 ~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~~~~~~~----~~~~~~~l~~~l~~~~gv 345 (384)
T PRK06348 273 RAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIY--AFINIKK----TGLSSVEFCEKLLKEAHV 345 (384)
T ss_pred HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 111222321 122233444455666788888887621222222222221 2344431 1456788898876 5699
Q ss_pred ccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 933 HGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 933 ~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
.+... .|. .++.+|++++ .++++++ ..++.|++
T Consensus 346 ~v~pg~~f~~~~~~~iRi~~~--~~~~~l~---~al~~l~~ 381 (384)
T PRK06348 346 LVIPGKAFGESGEGYIRLACT--VGIEVLE---EAFNRIEK 381 (384)
T ss_pred EEcCchhhccCCCCeEEEEec--CCHHHHH---HHHHHHHh
Confidence 86432 222 2478999985 4677777 77666654
No 363
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.63 E-value=2.4e-14 Score=163.90 Aligned_cols=276 Identities=15% Similarity=0.095 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.++++.+ ...+.+++|+.++.+++.++ . +++++||+++..|+..... +...|++++.++.
T Consensus 53 ~~~Le~~lA~l~~--~~~v~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 53 WRALEAALGELEG--AEALVFPSGMAAITAVLRAL---L-----RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred HHHHHHHHHHHcC--CCEEEECCHHHHHHHHHHHh---c-----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 5578889999983 33466677776654443332 1 4678999987755444332 2357999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
++++ + .+. +++++|++++|+ ++|.+. |+++|+++||++|++++||+++....+ ..|.++++|+++
T Consensus 123 ~~~~-------~-~~~---~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g~~lvVD~t~~~~~~--~~p~~~g~Divv 188 (366)
T PRK07582 123 AGMA-------E-AAL---AGADLVLAETPSNPGLDVC-DLAALAAAAHAAGALLVVDNTTATPLG--QRPLELGADLVV 188 (366)
T ss_pred CChH-------H-Hhc---cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCCCCccc--cCchhcCCcEEE
Confidence 5321 1 233 688999999994 788777 899999999999999999998753222 245567899999
Q ss_pred eCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|+||+++.+ +|-.+|+++++ +++.+.+.... ..++...+ + ..+|..++. -+.
T Consensus 189 ~S~sK~l~G~---~g~~~G~v~~~~~~l~~~l~~~~-------------~~~g~~~~-~-------~~a~l~~r~--l~t 242 (366)
T PRK07582 189 ASDTKALTGH---SDLLLGYVAGRDPELMAAVERWR-------------LLAGAIPG-P-------FEAWLAHRS--LGT 242 (366)
T ss_pred ecccccccCC---CCeeEEEEEcCcHHHHHHHHHHH-------------HHhCCCCC-H-------HHHHHHHhc--ccc
Confidence 9999998421 22346888875 45544332100 00011111 1 123333333 334
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeEcCC-CCc-----------eeEEEEEEecCccccCCCCHHHHHHHHHHCCC
Q 001990 868 LTEASKIAILNANYMAKRLEKHY---PILFRGV-NGT-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~~---~i~~~g~-~~~-----------~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi 932 (985)
+..+.++..+++..+++.|++.. .+.+++- ..+ ....+.|++. +.+++.+.|...++
T Consensus 243 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~~~~~~~~~~~l~~ 314 (366)
T PRK07582 243 LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------DAAAAERFVAASRL 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------CHHHHHHHHHhCCc
Confidence 55566788899999999998733 3344441 111 1222334432 35566666666666
Q ss_pred ccCCCC---------CC------C-CCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 933 HGPTMS---------WP------V-PGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 933 ~~~~~~---------~p------v-~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
.....+ .+ + ++.||+|++..++++.|+ .|.++|..
T Consensus 315 ~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~---dl~~al~~ 365 (366)
T PRK07582 315 VVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVA---DLERALDA 365 (366)
T ss_pred ceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHH---HHHHHHhh
Confidence 532111 00 1 367999999988877777 77666653
No 364
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.63 E-value=4.7e-14 Score=162.76 Aligned_cols=211 Identities=20% Similarity=0.201 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.+|+++|.+.+ +.+++|+.++..++.++. .++++||++...|+..... +...|++++.++.
T Consensus 61 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEAA-VATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 56899999999999874 667778776644433331 3678999988877643322 3468999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...+...++|+++
T Consensus 132 ~-----d~e~l~~~i~---~~tklV~le~p~Np~G~v~-dl~~I~~la~~~gi~livD~a~a~~~--~~~~~~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK---DNTKIVYFETPANPTMKLI-DMERVCRDAHSQGVKVIVDNTFATPM--LTNPVALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCchhc--cCCchhcCCCEEE
Confidence 4 8999999997 78999999999 5799987 89999999999999999999986433 2345567899999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|++|+|+.+ |+..+|+++.+++++..+... +. +.. .+...+ + ..||..+. +-+.+
T Consensus 201 ~S~sK~lgg~---g~~~gG~v~~~~~li~~l~~~--~~--------~~~-~g~~l~-----~---~~a~l~l~--~L~tl 256 (391)
T TIGR01328 201 HSATKYIGGH---GDVVAGLICGKAELLQQIRMV--GI--------KDM-TGSVIS-----P---FDAWLILR--GLKTL 256 (391)
T ss_pred ccccccccCC---CCceEEEEEcCHHHHHHHHHH--HH--------HhC-CCCCCC-----c---HHHHHHHh--CcCcH
Confidence 9999998532 223468888887765543210 00 000 011111 1 11233333 33445
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 001990 869 TEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~ 888 (985)
..+.++..+++.++.+.|++
T Consensus 257 ~~r~~~~~~na~~la~~L~~ 276 (391)
T TIGR01328 257 NIRMKRHSENAMKVAEYLKS 276 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 56677788899999999986
No 365
>PRK07480 putative aminotransferase; Validated
Probab=99.63 E-value=1e-13 Score=162.60 Aligned_cols=307 Identities=18% Similarity=0.199 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 633 MFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
...++.++|+++++.+. ..++.+||+++++++++.+|.|...+|..++.+||. ..++||..-......|.
T Consensus 95 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~ 174 (456)
T PRK07480 95 PAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGD 174 (456)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccC
Confidence 45578888988885322 347789999999999999998865555444666775 56789976443322221
Q ss_pred ----EEEEEeCCCCC----CCC--------HHHHHHHHH-hcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCC
Q 001990 703 ----KIVSVGTDAKG----NIN--------IEELRKAAE-ANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGG 761 (985)
Q Consensus 703 ----~v~~v~~~~~g----~iD--------le~L~~~i~-~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~ 761 (985)
.+..++..... ..+ ++++++.+. ...+++++|+++-. ...|++.+| +++|.++|++||+
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~ 254 (456)
T PRK07480 175 LPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDI 254 (456)
T ss_pred CCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 12223221100 011 366665553 23467888888753 346776532 9999999999999
Q ss_pred EEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCC-CcceeeeecccccCcCCCCccccCCCCCC
Q 001990 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (985)
Q Consensus 762 lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GG-Pg~G~l~~~~~l~~~lpg~~~g~~~~~~~ 832 (985)
++|+|+++. |+.+.|.+ -+|++++ .|.++ +|- | +|.+++++++.+.+.... +.
T Consensus 255 llI~DEV~t----GfGRtG~~~a~~~~gv~PDiv~~--gK~l~----gG~~P-i~av~~~~~i~~~~~~~~-~~------ 316 (456)
T PRK07480 255 LLVADEVIC----GFGRTGEWFGSQHFGIKPDLMTI--AKGLT----SGYIP-MGAVGVGDRVAEVLIEEG-GE------ 316 (456)
T ss_pred EEEEechhh----CCCcCcchhhhhhcCCCCCeeee--ehhhc----cCCcc-ceEEEEcHHHHHHHhcCC-CC------
Confidence 999999873 34444432 2688876 37663 331 4 566667777665441100 00
Q ss_pred CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEE
Q 001990 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA-ILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIV 907 (985)
Q Consensus 833 ~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~-~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv 907 (985)
....+++.|+++.++++.+.|..+.++++.+ +. ....++|+++|++. ..++ +.|. +. +..+-+
T Consensus 317 -------~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~---~~~~~~g~~l~~~l~~l~~~~~i~~vrG~-Gl-m~gie~ 384 (456)
T PRK07480 317 -------FNHGFTYSGHPVAAAVALANLRILRDEGIVE---RVRDDTGPYLQKRLRELADHPLVGEVRGV-GL-VGAIEL 384 (456)
T ss_pred -------cccCCCCCcCHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHHHhhcCCCeeeEEee-cc-eEEEEE
Confidence 0011234457778888889998887766543 44 35567777777651 2211 1221 11 211222
Q ss_pred EecCccccCCC-C----HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 908 DLRGLKNTAGI-E----PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 908 ~~~~~~~~~g~-~----~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.-+. ...... + ...+.+.|.++|+.+... .+.+|++|....|++||| +++++|.+++.++.+
T Consensus 385 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~l~~~Ppl~it~~eid---~~~~~l~~al~~~~~ 451 (456)
T PRK07480 385 VKDK-ATRERFEAGGGVGTICRDHCFANGLIMRAV----GDRMIISPPLVITHAEID---ELVEKARKALDATAA 451 (456)
T ss_pred eccc-cccccCcchhhHHHHHHHHHHHCCcEEeec----CCEEEEECCCCCCHHHHH---HHHHHHHHHHHHHHH
Confidence 1110 000000 1 245777888999987532 368999999999999999 999999999887643
No 366
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=4e-14 Score=162.70 Aligned_cols=289 Identities=14% Similarity=0.140 Sum_probs=180.7
Q ss_pred cHHHHHHHHHHHHHHHhCC--CccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEE
Q 001990 629 GYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (985)
Q Consensus 629 G~~~~~~el~~~la~l~G~--~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~ 706 (985)
|..++.+.+.+++.+.+|. +..+++.++|++. +..++++.+. .+++.|+++.+.+..+...++..|++++.
T Consensus 66 g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~--~l~~~~~~~~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~ 138 (368)
T PRK03317 66 DAVALRADLAAYLTAQTGVGLTVENVWAANGSNE--ILQQLLQAFG-----GPGRTALGFVPSYSMHPIIARGTHTEWVE 138 (368)
T ss_pred chHHHHHHHHHHhhhhccCCCChhhEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHhcCCeeEE
Confidence 5444444445555444454 4456666666542 2223333331 46788999888776666667788999988
Q ss_pred EeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccc-cCCCCCC---c
Q 001990 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTSPG---Y 781 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~-~g~~~~g---~ 781 (985)
++.++++.+|++++++++++ +++++|++++| |++|.+. +.+++.++++.+++++++|+++..-. .+..... .
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~ 215 (368)
T PRK03317 139 GPRAADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPTGTAL-PLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP 215 (368)
T ss_pred cccCCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH
Confidence 88766678999999999973 36678888999 5799998 79999999998899999999985210 1110100 0
Q ss_pred CCCc-EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHH
Q 001990 782 IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (985)
Q Consensus 782 ~g~D-i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l 860 (985)
...+ +++.|+.|+|+. .|.++|++++++++.+.+.... .+.+++ .....++.+.+
T Consensus 216 ~~~~~i~~~SfSK~~g~----~GlRiG~~~~~~~~~~~l~~~~--------------~~~~~s------~~~~~a~~~~l 271 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAF----AGGRLGYLAAAPAVVDALRLVR--------------LPYHLS------AVTQAAARAAL 271 (368)
T ss_pred hCCCEEEEEechhhhcc----chhhhhhhhCCHHHHHHHHhcC--------------CCCCCC------HHHHHHHHHHh
Confidence 1124 455577777743 4678999999887765543110 000111 11112222333
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEE-EecCccccCCCCHHHHHHHHHHCCCccCCCC
Q 001990 861 AMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIV-DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (985)
Q Consensus 861 ~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv-~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~ 938 (985)
.. .+.+.+..++..++.+++.+.|++ ++.+ ..+.+.+ +++ ++ .+..++.+.|.++||.+....
T Consensus 272 ~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~---~~~~~~--------~~~~~~~~~l~~~Gv~v~~~~ 336 (368)
T PRK03317 272 RH--ADELLASVAALRAERDRVVAWLRELGLRV--APSDANF---VLFGRF--------ADRHAVWQGLLDRGVLIRDVG 336 (368)
T ss_pred hC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEe--CCCCCcE---EEEecc--------CCHHHHHHHHHHCCEEEEeCC
Confidence 22 123334445556667778888876 4332 2222222 222 22 246789999999999886433
Q ss_pred CCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 939 WPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 939 ~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
. ++++|++++ +.+|++ +++++|+++++.
T Consensus 337 ~--~~~iRi~~~---~~~~~~---~~~~~l~~~~~~ 364 (368)
T PRK03317 337 I--PGWLRVTIG---TPEEND---AFLAALAEVLAT 364 (368)
T ss_pred C--CCeEEEecC---CHHHHH---HHHHHHHHHHHH
Confidence 2 589999974 788999 999999988754
No 367
>PRK09148 aminotransferase; Validated
Probab=99.63 E-value=6.9e-14 Score=162.72 Aligned_cols=305 Identities=13% Similarity=0.069 Sum_probs=180.1
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--cc-ceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~--~~-~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+.+|.+ .. .+..++|++ +.. .+++.+. .+++.|+++++.|..+...++..|++
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~---~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~ 139 (405)
T PRK09148 68 KGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA---NMAQAIT-----APGDVILCPNPSYPIHAFGFIMAGGV 139 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH---HHHHHhc-----CCCCEEEEcCCCCcccHHHHHhcCCE
Confidence 576666666666666666753 33 455555544 432 2233221 36789999999887777777889999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEcccccccc-C--CC
Q 001990 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV-G--LT 777 (985)
Q Consensus 704 v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~~-g--~~ 777 (985)
++.+|.+.++. ++++++++++.+.+++++|++++| |++|.+.+ .+++|.++|+++|+++++|+++..-.. + +.
T Consensus 140 v~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 218 (405)
T PRK09148 140 IRSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPP 218 (405)
T ss_pred EEEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCC
Confidence 99999865542 356666666554478899999998 58999872 257899999999999999998742110 1 11
Q ss_pred CCCc----CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHH
Q 001990 778 SPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 778 ~~g~----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
.... .+..+++.|++|+|+.| |.++|++++++++++.+.. .. ...+.+.+...+
T Consensus 219 s~~~~~~~~~~~i~~~SfSK~~~~p----GlR~G~~v~~~~~i~~l~~-~~-------------~~~~~~~~~~~q---- 276 (405)
T PRK09148 219 SVLQVPGAKDVTVEFTSMSKTFSMA----GWRMGFAVGNERLIAALTR-VK-------------SYLDYGAFTPIQ---- 276 (405)
T ss_pred ChhhCCCccCcEEEEeccccccCCc----chheeeeeCCHHHHHHHHH-HH-------------HHhccCCChHHH----
Confidence 1111 12235578888988654 6789999988776654421 00 000011100011
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCC
Q 001990 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (985)
Q Consensus 854 ~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~G 931 (985)
.++...+. -.++-+++..+...++.+++.+.|++ ++.+ ..+.+..+ +.++++.. ..+.+..++++.|. ++|
T Consensus 277 ~~~~~~L~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~p~~g~f--~~~~l~~~--~~~~~~~~~~~~ll~~~g 349 (405)
T PRK09148 277 VAATAALN-GPQDCIAEMRELYKKRRDVLVESFGRAGWDI--PPPAASMF--AWAPIPEA--FRHLGSLEFSKLLVEKAD 349 (405)
T ss_pred HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHcCCcc--CCCCeeEE--EEEECCCc--cCCCCHHHHHHHHHHhCC
Confidence 11122222 12233444555667777888888876 4332 12222211 33444310 00134578888765 689
Q ss_pred CccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 932 FHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 932 i~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
|.+... .|+ .++++||++. .+.++++ ..++.|.+++.+.
T Consensus 350 V~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~---~al~~l~~~l~~~ 391 (405)
T PRK09148 350 VAVAPGVGFGEHGDGYVRIALV--ENEQRIR---QAARNIKRFLSSA 391 (405)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHH---HHHHHHHHHHHHH
Confidence 986432 232 2478999986 4566666 6666666665543
No 368
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.63 E-value=6.3e-14 Score=160.58 Aligned_cols=272 Identities=17% Similarity=0.156 Sum_probs=178.5
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch---
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~--- 289 (985)
..++++.+|++.|.+. +.++.+|++++.+++ ++ .. +||+||+++..|+++...+...++.+|++++++|..
T Consensus 54 ~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~l-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 127 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SL-FR--SGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLK 127 (366)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HH-hC--CCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHH
Confidence 3457799999999987 467889998877654 32 23 789999999999998888776677789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~G 366 (985)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|+++++| +..+.+....|.++|+||+++|. |.++++ |
T Consensus 128 ~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD-~t~~~~~~~~p~~~g~di~i~S~sK~~~g~---~ 203 (366)
T PRK08247 128 AIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD-NTFYTPVLQRPLEEGADIVIHSATKYLGGH---N 203 (366)
T ss_pred HHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCchhcCCcEEEeecceeccCC---C
Confidence 4555 7789999999998 67999999999999999999999995 45555656667778999999998 887633 1
Q ss_pred CCceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 367 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 367 GP~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
+--.|++.++ +++.+.+. ..+.. ...|. +++. .|+...+-+-+..
T Consensus 204 d~~~G~iv~~~~~l~~~~~-------------------------~~~~~---~g~~~-s~~~-----a~l~~~~l~tl~~ 249 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLA-------------------------YYQNA---AGAVL-SPFD-----SWLLIRGMKTLAL 249 (366)
T ss_pred ceeeeEEecChHHHHHHHH-------------------------HHHHh---cCCCC-ChHH-----HHHHHhccCcHHH
Confidence 1124677765 44443320 00000 01111 1211 1223334455666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcceEEEecCC---HHHHHHHHHHc--Ccee---------e------e---
Q 001990 446 IAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD---AHAIASAAYKI--EMNL---------R------V--- 501 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~~~~i~~~~---~~~l~~~L~~~--Gi~~---------~------~--- 501 (985)
..++..+++..+++.|+++.++..+..| ...-++|.+++ ..++.+.|.-. +..+ + .
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~ 329 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPE 329 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCH
Confidence 6777889999999999998547643222 23345555543 22333333211 1110 0 0
Q ss_pred -------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 502 -------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 502 -------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
+.++.+|+|++.-+.++-|+.|.++|.
T Consensus 330 ~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~ 363 (366)
T PRK08247 330 EIRIANGVCNRLLRFSVGIENVEDLIADLKQAFK 363 (366)
T ss_pred HHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 013567888887766666666666664
No 369
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.63 E-value=2.7e-14 Score=165.31 Aligned_cols=211 Identities=20% Similarity=0.195 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+. .+.+++|+.++.+++.++. .++++||++...|+..... ++..|++++.++.
T Consensus 66 ~~~Le~~iA~~~g~~~-~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 66 STEVENKLALLEGGEA-AVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 4578999999999875 4667788776644444332 4678999988877654332 4678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEEccccccccCCCCCCcCCCcE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGADV 786 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~--g~lliVD~a~~~~~~g~~~~g~~g~Di 786 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++|+++ |+++++|+++..+. +..+..+++|+
T Consensus 137 ~-----d~e~l~~~i~---~~tklI~iesP~NPtG~v~-dl~~I~~la~~~~~~i~livDea~~~~~--~~~~l~~g~Di 205 (400)
T PRK06234 137 S-----NLEEVRNALK---ANTKVVYLETPANPTLKVT-DIKAISNIAHENNKECLVFVDNTFCTPY--IQRPLQLGADV 205 (400)
T ss_pred C-----CHHHHHHHhc---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhcCCCCEEEEECCCCchh--cCCchhhCCcE
Confidence 4 8999999997 78999999999 5799998 899999999997 99999999985432 23455678999
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++.|++|+|+.+ |...+|++++++++.+.+... +. ...++... ++ ..+|..+ .|-+
T Consensus 206 vv~S~sK~l~g~---g~~~gG~v~~~~~~~~~l~~~--~~---------~~~~g~~l-----~p---~~a~l~~--~~l~ 261 (400)
T PRK06234 206 VVHSATKYLNGH---GDVIAGFVVGKEEFINQVKLF--GI---------KDMTGSVI-----GP---FEAFLII--RGMK 261 (400)
T ss_pred EEeeccccccCC---CCceeEEEEecHHHHHHHHHH--HH---------HHhcCCCC-----CH---HHHHHHH--hccC
Confidence 999999999522 112368999887766544210 00 00011111 11 1123322 3334
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001990 867 GLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.+..+.++..+++.++.+.|++
T Consensus 262 tl~~r~~~~~~na~~~a~~L~~ 283 (400)
T PRK06234 262 TLQIRMEKHCKNAMKVAKFLES 283 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHc
Confidence 4556667778899999999986
No 370
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.63 E-value=8.1e-14 Score=162.56 Aligned_cols=307 Identities=10% Similarity=0.072 Sum_probs=178.7
Q ss_pred hcHHHHHHHHHHHHHHHhC--------CCccceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHH
Q 001990 628 QGYQEMFNNLGEWLCTITG--------FDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA 698 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G--------~~~~~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~ 698 (985)
+|..++.+.+.+++.+.++ .+...+..++| +++.. ++++.+. .++++|+++.+.|..+...++
T Consensus 75 ~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~ 146 (412)
T PTZ00433 75 VGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAIL---MALTALC-----DEGDNILVPAPGFPHYETVCK 146 (412)
T ss_pred CCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHH---HHHHHhc-----CCCCEEEEccCCcccHHHHHH
Confidence 5655555444555444332 33444545444 44442 2233221 367899999988877777788
Q ss_pred hcCcEEEEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc
Q 001990 699 MCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 699 ~~G~~v~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
..|++++.++.++ ++.+|+++|+++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..-.
T Consensus 147 ~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 147 AYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 9999999999864 36899999999887 67899999999 5799864 258899999999999999999874211
Q ss_pred -cC--CCCCCcC---CCcEEEeCCcccccccCCCCCCcceeeeec------ccccCcCCCCccccCCCCCCCCCCCCCCC
Q 001990 774 -VG--LTSPGYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVK------KHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (985)
Q Consensus 774 -~g--~~~~g~~---g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~------~~l~~~lpg~~~g~~~~~~~~~~~~~t~~ 841 (985)
.+ +.....+ ..-+++.|+.|+|+. .|.++|++++. +++...+.. +. ....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~----pGlRlG~~i~~~p~~~~~~~~~~~~~--~~-----------~~~~~ 286 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVV----PGWRLGWLLLVDPHGNGGDFLDGMKR--LG-----------MLVCG 286 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCC----CCeeEEEEEEeCCcccHHHHHHHHHH--Hh-----------hccCC
Confidence 11 0000111 112566777888754 47899999872 223222210 00 00001
Q ss_pred cccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCC-CCH
Q 001990 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAG-IEP 920 (985)
Q Consensus 842 i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g-~~~ 920 (985)
++ .....++..++..-.++-+.+..+...++.+.+.+.|++...+.+..+.+..+ +.+.++. ....+ .+.
T Consensus 287 ~~------~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--~~~~l~~-~~~~~~~~~ 357 (412)
T PTZ00433 287 PC------SVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMF--LMSRLDL-EKFRDIKSD 357 (412)
T ss_pred CC------hHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEE--EEEEech-hhcCCCCCH
Confidence 11 11111112222211122244445566677788888887622222212222221 2333320 00001 246
Q ss_pred HHHHHHHH-HCCCccCCC-CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 921 EDVAKRLM-DYGFHGPTM-SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 921 ~~l~~~L~-e~Gi~~~~~-~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.++++.|. ++||.+... .|..++++|++++. .+++++ +.++.|.++++..+
T Consensus 358 ~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~---~al~~l~~~~~~~~ 410 (412)
T PTZ00433 358 VEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLR---EAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHH---HHHHHHHHHHHHhc
Confidence 78888887 579986432 23346899999974 477788 88888888776544
No 371
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.63 E-value=9.2e-14 Score=161.42 Aligned_cols=259 Identities=17% Similarity=0.159 Sum_probs=158.7
Q ss_pred CCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC-CC-C-CCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHH
Q 001990 678 HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KG-N-INIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDE 751 (985)
Q Consensus 678 ~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-~g-~-iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~e 751 (985)
.++++|+++++.|..+...++..|++++.++.+. +| . .|+++|+++++ +++++|++++| |++|.+.+ ++++
T Consensus 110 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~ 186 (397)
T PRK07568 110 DPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVYTKEELEM 186 (397)
T ss_pred CCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccCCHHHHHH
Confidence 3678999988877666666778899999999863 34 2 36899999887 68899999999 57998852 5899
Q ss_pred HHHHHHHcCCEEEEEccccccc-cC--CCCCCcC-C-Cc--EEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCc
Q 001990 752 ICKIIHDNGGQVYMDGANMNAQ-VG--LTSPGYI-G-AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHP 823 (985)
Q Consensus 752 I~~la~~~g~lliVD~a~~~~~-~g--~~~~g~~-g-~D--i~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~ 823 (985)
|+++|+++|+++++|+++..-. .+ ......+ + .| +++.|++|+|+. .|.++|++++. +++.+.+....
T Consensus 187 i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~----~G~R~G~~~~~~~~~~~~~~~~~ 262 (397)
T PRK07568 187 LAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSA----CGARIGCLISKNKELIAAAMKLC 262 (397)
T ss_pred HHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccC----CCcceEEEecCCHHHHHHHHHHh
Confidence 9999999999999999874211 11 0011111 1 12 667788888854 36789999875 45543321000
Q ss_pred cccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeE
Q 001990 824 VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAH 903 (985)
Q Consensus 824 ~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~ 903 (985)
.. ..+.+...+ .++..++. .+++-+.+..+...++.+.+.+.|++...+.+..+.+.++
T Consensus 263 -------------~~--~~~~s~~~q----~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~- 321 (397)
T PRK07568 263 -------------QA--RLSPPTLEQ----IGAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY- 321 (397)
T ss_pred -------------hc--cCCCCcHHH----HHHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE-
Confidence 00 011111111 11122222 1233344555556777788888887632222222222221
Q ss_pred EEEEEecCccccCCCCHHHHHHHHHH------CCCccCCC-CC---C--CCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 904 EFIVDLRGLKNTAGIEPEDVAKRLMD------YGFHGPTM-SW---P--VPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 904 ~~vv~~~~~~~~~g~~~~~l~~~L~e------~Gi~~~~~-~~---p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
+.++++ ..+..++++.|.+ +||.+... .| + .++.+|++++ .+.++++ +.++.|.++
T Consensus 322 -~~~~l~------~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~---~~~~~l~~~ 389 (397)
T PRK07568 322 -IIAKLP------VDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLK---RAMEILKEA 389 (397)
T ss_pred -EEEecC------CCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHH---HHHHHHHHH
Confidence 234543 1356788888865 58876431 12 2 1368999986 4578888 999988887
Q ss_pred HHHHH
Q 001990 972 TKFTT 976 (985)
Q Consensus 972 ~~~~~ 976 (985)
+++..
T Consensus 390 l~~~~ 394 (397)
T PRK07568 390 LEKYN 394 (397)
T ss_pred HHHhh
Confidence 76543
No 372
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.62 E-value=4.8e-14 Score=160.13 Aligned_cols=294 Identities=15% Similarity=0.080 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHhhCCCCcc--eeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHH-HhhcCCCe-EEEE
Q 001990 210 LESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-TRADGFDI-KVVV 285 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~~~--~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~-~~a~~~gi-~v~~ 285 (985)
.+.+.+.++.+.+|++.+..+ +.+..+||+++||+++++--. ++++|++.. .|... |. ..++..|+ ++..
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~--~g~~vLv~g-~FG~r---~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC--RGVDVLAWE-SFGKG---WVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC--CCCeEEEEC-HHHHH---HHHHHHHhcCCCCcEE
Confidence 567778889999999975332 445789999999998875312 678888864 44332 22 33555677 3555
Q ss_pred eCch-----hhhccCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cc
Q 001990 286 SDLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QR 358 (985)
Q Consensus 286 ~~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~ 358 (985)
++.+ +++++..+ +.|++++ -+++|+..|+++|++.. ++++++||+ ..++|..+-.-+ ++|+++.++ |.
T Consensus 112 l~~~~g~~~~~~~ve~~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa-vSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDFK-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA-TSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred EcCCCCCCCCHHHcCCC-CCEEEecCCCchheecccccccccc--CCCcEEEEc-cchhcCCCCChh-HCcEEEEechhc
Confidence 5321 12222222 2255555 58899999998777433 488999954 346665432222 599999999 87
Q ss_pred ccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccc---ccccccccCCCccchhHHHHHHHHHHH
Q 001990 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYA 435 (985)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre---~~~rre~atsni~t~~~l~a~~aa~y~ 435 (985)
|++| ||++|+++|++.+++...+---+ + -+. .+.++... .+. +..-|.|......++++..++
T Consensus 187 L~~p-----pGls~v~vs~~Al~~~~~~~~y~--~---~~~-~~~~~~~~~~~~~~-~~~~t~~TP~v~~l~a~~~~l-- 252 (374)
T TIGR01365 187 LGGE-----GAHGMLILSPRAVARLESYTPAW--P---LPK-IFRLTKGGKLNKKI-FEGSTINTPSMLCVEDWLDAL-- 252 (374)
T ss_pred cCCC-----CceEEEEECHHHHHHHhhcCCCC--C---Chh-hhccccccchhhhh-hcCCCCCChHHHHHHHHHHHH--
Confidence 8766 78999999999887653110000 0 000 12211100 011 122356665445565555554
Q ss_pred HHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcce-EEEec--C-------C-----HHHHHHHHHHcC
Q 001990 436 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDT-VKVKC--A-------D-----AHAIASAAYKIE 496 (985)
Q Consensus 436 ~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~~-~~i~~--~-------~-----~~~l~~~L~~~G 496 (985)
.++..+ |++++.+|+.+++++++++++++|.+.++.. ...++ +++.. + + +.++.+.|.++|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 445554 8999999999999999999999974666642 23333 23333 2 1 478899999999
Q ss_pred ceeee----ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 497 MNLRV----VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 497 i~~~~----~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
|.+.. ..+..+||.-.-..+.+|++.+++.|.
T Consensus 333 i~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 333 VAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred EEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 97642 124789999999999999999999885
No 373
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.62 E-value=1.8e-14 Score=172.45 Aligned_cols=274 Identities=13% Similarity=0.100 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..+.++|+.+|+++|++.+.+ +++|+|++.-+++++.. . +||+||+++++|.|+...+. ..|+..+++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~haLi----lsga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYM-VTNGTSTANKIVGMYSA-P--AGSTVLIDRNCHKSLTHLMM----MSDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCchHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeEEEecccc
Confidence 457889999999999998766 77888888888888763 3 89999999999999998764 35888888643
Q ss_pred ----------------hhhhc-c--CCCEe---EEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE----eccccccCCC
Q 001990 289 ----------------KDIDY-K--SGDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 342 (985)
Q Consensus 289 ----------------~~l~~-l--~~~t~---~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~----a~~~alg~l~ 342 (985)
+.+++ + .++.+ .+++|+|||.|.+.|+++|++++|.++ ++|| ++......++
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccC
Confidence 23333 3 23444 799999999999999999999999988 4673 2211112222
Q ss_pred --CCCcccc---e--EEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEeccccccccccc
Q 001990 343 --PPGELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 414 (985)
Q Consensus 343 --~p~~~Ga---D--i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre 414 (985)
.+-..|+ | +++.|. |.|++ ++ ++++++++.. + | +.|..
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~a-lT----QaS~LHvkg~----v---------d----------------~~~~n 390 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAA-FS----QASMIHVKGD----V---------N----------------EETFN 390 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccc-hh----HHhHHHHcCC----C---------C----------------HHHHH
Confidence 2334677 5 999999 66643 11 3345544221 0 1 00111
Q ss_pred ccCCCccchhHHHHHHHHHH--HHHcC-cchHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCCC------------
Q 001990 415 KATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP------------ 473 (985)
Q Consensus 415 ~atsni~t~~~l~a~~aa~y--~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~g~------~~~~~~~------------ 473 (985)
.+-.-.-|+++.|.++||+- ..++. +.| +++.++..+.+..+++.|.++.+ +++++..
T Consensus 391 ~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p 469 (714)
T PRK15400 391 EAYMMHTTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (714)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCc
Confidence 11122235588899999983 22332 234 56778888999999999988765 6665210
Q ss_pred ---------------Ccce--EEEecC-----------C--HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHH
Q 001990 474 ---------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKL 523 (985)
Q Consensus 474 ---------------~~~~--~~i~~~-----------~--~~~l~~~L~~~Gi~~~~~~~~~lris~~~~~t~edid~l 523 (985)
..++ ++|.++ + +..+.+.|.++||.++..+...+++.++..+|++++++|
T Consensus 470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L 549 (714)
T PRK15400 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSL 549 (714)
T ss_pred cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHH
Confidence 1243 445442 2 678999999999999998889999999999999999999
Q ss_pred HHHHhC
Q 001990 524 FIVFAG 529 (985)
Q Consensus 524 l~~l~~ 529 (985)
+++|..
T Consensus 550 ~~aL~~ 555 (714)
T PRK15400 550 LRALTD 555 (714)
T ss_pred HHHHHH
Confidence 999974
No 374
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.62 E-value=6.5e-14 Score=162.16 Aligned_cols=297 Identities=11% Similarity=0.086 Sum_probs=179.4
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Ccc-ceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~-~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++.+.+.+++.+..|. +.. ++..++|++ +.. ++++.+. .++|+|+++++.+..+...++..|++
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~---~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 139 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTA---HLPLAVL-----NPGDFALLLDPGYPSHAGGVYLAGGQ 139 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 56666665666666655564 444 466555554 332 2233221 46789999998887777778899999
Q ss_pred EEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cCC-
Q 001990 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL- 776 (985)
Q Consensus 704 v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g~- 776 (985)
++.+|.+++ ...|++++++.+. +++++|++++| |++|.+- ..+++|+++|+++|+++++|+++..-. .+.
T Consensus 140 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 140 IYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred EEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 999999754 3578999988776 67889999999 5799986 247888889999999999999874221 110
Q ss_pred --CCCCc---CC-CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 777 --TSPGY---IG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 777 --~~~g~---~g-~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
..... .+ .-+++.|+.|+|+. .|.++|++++++++++.+.... ...++++ ..
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~----~GlRiG~~v~~~~li~~l~~~~--------------~~~~~~~----~~ 274 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSYNM----GGFRIGFAIGNAQLIQALRQVK--------------AVVDFNQ----YR 274 (388)
T ss_pred CCCChhhCCCCcccEEEEeecccccCC----cchhheehcCCHHHHHHHHHHH--------------hhcccCC----CH
Confidence 00111 11 12556788888854 4789999999887765442100 0001111 01
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH-H
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-M 928 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L-~ 928 (985)
....++.+.+.. .++-+++..+...++.+++.+.|++ ++.. ..+.+.. .+.++++. ..+.+..++++.| .
T Consensus 275 ~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~--~~p~~g~--f~~~~~~~---~~~~~~~~~~~~l~~ 346 (388)
T PRK07366 275 GILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPV--PLPEATM--YVWAKLPE---PWQGNSVEFCTQLVA 346 (388)
T ss_pred HHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcc--cCCCeeE--EEEEECCc---ccCCCHHHHHHHHHH
Confidence 111122222211 1233455556667777888888876 3332 1221222 13345431 0012467788777 5
Q ss_pred HCCCccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 929 DYGFHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 929 e~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
++||.+... .|. .++++|++++ .+.++++ +.++.|++
T Consensus 347 ~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~---~~l~rl~~ 386 (388)
T PRK07366 347 QTGVAASPGSGFGKSGEGYVRFALV--HDPDILE---EAVERIAA 386 (388)
T ss_pred hCCEEEeCchHhCcCCCCeEEEEec--CCHHHHH---HHHHHHHH
Confidence 679986432 222 2478999986 3577777 77776654
No 375
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.62 E-value=9.5e-14 Score=162.30 Aligned_cols=272 Identities=14% Similarity=0.127 Sum_probs=174.0
Q ss_pred HHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHH-hhcCCCeEEEEeCc------
Q 001990 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL------ 288 (985)
Q Consensus 216 ~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~-~a~~~gi~v~~~~~------ 288 (985)
++..+++++|.+.+++ ++.+||.++++++.++ +. +||+|+++...|+++...+.. .....|++++.++.
T Consensus 76 ~~~~la~~~g~~~~~i-~~~sgt~al~~~l~~l-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 151 (416)
T PRK00011 76 AIDRAKELFGAEYANV-QPHSGSQANAAVYFAL-LK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGL 151 (416)
T ss_pred HHHHHHHHhCCCceee-ecCCchHHHHHHHHHh-cC--CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCC
Confidence 4568999999987655 4456777777766655 33 899999999999875433211 11234666666543
Q ss_pred ---hhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcccceEEEecC-c
Q 001990 289 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA-Q 357 (985)
Q Consensus 289 ---~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-----~~p~~~GaDi~v~s~-k 357 (985)
+++++ +. .++++|++..+ .+|...|+++|+++||++|+++++|+ .++.|.. ..+.. ++|++++|+ |
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~-~~~~~~~~~~I~~la~~~~~~livD~-a~~~g~~~~g~~~~~~~-~~di~~~S~~K 228 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGAS-AYSRPIDFKRFREIADEVGAYLMVDM-AHIAGLVAAGVHPSPVP-HADVVTTTTHK 228 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCC-cCCCccCHHHHHHHHHHcCCEEEEEC-cchhcccccCccCCCCC-CCcEEEecCCc
Confidence 45555 54 37888887654 45777899999999999999999942 2233322 22333 789999998 7
Q ss_pred cccccCCCCCCceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001990 358 RFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (985)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~ 436 (985)
+|+ ||..|++.++ +++.+++.... .+ + ..+++. .....++.++. .
T Consensus 229 ~l~------g~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~---~~~~aa~~~a~--~ 274 (416)
T PRK00011 229 TLR------GPRGGLILTNDEELAKKINSAV---------FP-G-------------IQGGPL---MHVIAAKAVAF--K 274 (416)
T ss_pred CCC------CCCceEEEeCCHHHHHHHHHHh---------Cc-c-------------ccCCcc---HHHHHHHHHHH--H
Confidence 663 3445677775 56665541000 00 0 001111 11222222222 2
Q ss_pred HcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcceEEEecC----CHHHHHHHHHHcCceeee----e-----
Q 001990 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA----DAHAIASAAYKIEMNLRV----V----- 502 (985)
Q Consensus 437 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~----~~~~l~~~L~~~Gi~~~~----~----- 502 (985)
....++++++.++..++++++++.|+++| +++.. ....+.+.+.++ ...++.+.|.++||.++. .
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~ 353 (416)
T PRK00011 275 EALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSP 353 (416)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence 22345788899999999999999999987 88763 221233445443 267888999999998752 1
Q ss_pred -cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001990 503 -DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 -~~~~lris~~~----~~t~edid~ll~~l~~ 529 (985)
.+..+|++.+. ..|++|+++++++|..
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~ 385 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIAD 385 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHHH
Confidence 13568987644 4569999999999974
No 376
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.62 E-value=6.6e-14 Score=161.89 Aligned_cols=208 Identities=15% Similarity=0.202 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.+|+++|.+.+.+ +++|+.++.+++++.. .++|+||++...|+.+... +...|++++.++.
T Consensus 67 ~~~Le~~lA~l~G~~~~~~-~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 137 (398)
T PRK07504 67 VDMFEKRMCALEGAEDARA-TASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG 137 (398)
T ss_pred HHHHHHHHHHHhCCCeeeE-ecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC
Confidence 5678999999999987654 5577766543333221 4678999988766654333 2457999988863
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ ++|++|++++| |++|.+. |+++|+++|+++|++++||+++..+. +..+..+|+|+++
T Consensus 138 -----~d~e~l~~ai~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~gi~lvvD~a~a~~~--~~~~~~~gaDivv 206 (398)
T PRK07504 138 -----LDLDNWEKAVR---PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAGAKLVVDNVFATPL--FQKPLELGAHIVV 206 (398)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCcEec-CHHHHHHHHHHcCCEEEEECCccccc--cCCchhhCCCEEE
Confidence 69999999997 88999999999 5799998 89999999999999999999986433 2356678999999
Q ss_pred eCCcccccccCCCCCCcc-eeeeecccccC-cCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~-G~l~~~~~l~~-~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+|+||+|+. .|.++ |+++.+++++. .+.... + ..+...+ + ..||..+. +-+
T Consensus 207 ~S~sK~l~g----~g~~~GG~vv~~~~~i~~~~~~~~-----------~--~~g~~~s-----~---~~A~~~l~--~L~ 259 (398)
T PRK07504 207 YSATKHIDG----QGRCLGGVVLSDKAWIEEHLQDYF-----------R--HTGPSLS-----P---FNAWTLLK--GLE 259 (398)
T ss_pred eeccccccC----CccceEEEEEeCcHHHHHHHHHHH-----------H--HhCCCCC-----H---HHHHHHHh--ccc
Confidence 999999953 23334 57766665432 111000 0 0011111 1 12233333 334
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001990 867 GLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.+..+.++..+++..+.+.|++
T Consensus 260 tl~~R~~~~~~na~~la~~L~~ 281 (398)
T PRK07504 260 TLPVRVRQQTESAAAIADFLAG 281 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHc
Confidence 4566677778999999999986
No 377
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.62 E-value=1e-13 Score=159.04 Aligned_cols=304 Identities=15% Similarity=0.096 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
...++++++++.+|.+.. +.+++|++|...++.++ +..++|+||+++..|......+...|++++.++++++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~aL~~~l~al-------~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~ 103 (376)
T TIGR02379 32 FSRRCETWLENRTGTKKA-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (376)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHc-------CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 356788999999998764 55677776653333322 1247899999998666555556788999999999876
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCC-CCCCcCCCcEEEeC
Q 001990 713 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 790 (985)
Q Consensus 713 -g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~-~~~g~~g~Di~~~s 790 (985)
+.+|+++++++++ ++|++|+.++| +|... |+++|.++|+++|++++.|++|+.+..-- ...+.+ .|+.++|
T Consensus 104 ~~~~d~~~le~~i~---~~tk~Iip~~~--~G~~~-d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-~~~~~fS 176 (376)
T TIGR02379 104 TMNIDETLIESAIT---HRTKAIVPVHY--AGVAC-DMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-GHLGTFS 176 (376)
T ss_pred cCCCCHHHHHHhcC---cCceEEEEeCC--CCCcc-CHHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-CCEEEEe
Confidence 5799999999997 78999887664 58877 89999999999999999999986542111 122333 3888999
Q ss_pred CcccccccCCCCCCcceeeeec-ccccCcCCC-CccccCCCC-C---CCCC---CCCCCCcccccchhhhHHHHHHHHHH
Q 001990 791 LHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI-P---APEK---SQPLGTIAAAPWGSALILPISYTYIA 861 (985)
Q Consensus 791 ~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg-~~~g~~~~~-~---~~~~---~~~t~~i~s~~~g~~~~~~~A~a~l~ 861 (985)
+|++ +.+..||. +|+++++ +++.+.+.. +..|...+. . .... ..++ |... .-..++...+.|.
T Consensus 177 f~~~--K~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-n~~~----~~~~Aa~g~~qL~ 248 (376)
T TIGR02379 177 FHET--KNYTSGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGS-SYLP----SELQAAYLWAQLE 248 (376)
T ss_pred CCCC--CcCcccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecc-cCCc----cHHHHHHHHHHHH
Confidence 8874 33333433 4666555 555543321 001111000 0 0000 0011 1110 1111111222222
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhccC--C-eeEcC-CC--CceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC
Q 001990 862 MMGSKGLTEASKIAILNANYMAKRLEKHY--P-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (985)
Q Consensus 862 ~lg~~gl~~~~~~~~~~a~~l~~~L~~~~--~-i~~~g-~~--~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~ 935 (985)
. +.+..++..+++++..+.|.+.. . +..+. +. ....+.+.+.++ .+.+..++.+.|.++||.+.
T Consensus 249 ~-----l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~r~~l~~~L~~~gI~~~ 318 (376)
T TIGR02379 249 Q-----ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLK-----DEDDRNELIKYLKEQEIMAV 318 (376)
T ss_pred H-----hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEEC-----CcCCHHHHHHHHHHCCCCcc
Confidence 2 34444455566667777776521 1 11111 11 122234455553 12467899999999999754
Q ss_pred CCC-----CC----C--------------CCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 936 TMS-----WP----V--------------PGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 936 ~~~-----~p----v--------------~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
... .| . ...|.+-.+...|++|++ +.+++|+++.
T Consensus 319 ~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~---~i~~~i~~~~ 375 (376)
T TIGR02379 319 FHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA---RVIQTICDYL 375 (376)
T ss_pred ccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH---HHHHHHHHHh
Confidence 211 11 0 134666667778999999 9999998753
No 378
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.62 E-value=1.5e-13 Score=158.49 Aligned_cols=341 Identities=17% Similarity=0.163 Sum_probs=213.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCCc-cceecCCCCCCCCCcHHHHHHHHhCCc--cccc------cCCChhhH--hh
Q 001990 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPA--WYTQ------YTPYQAEI--AQ 207 (985)
Q Consensus 139 ~~lp~~~~~~se~e~~~~~~~~~~~n~~-~~~~lG~g~~~~~~p~~v~~~i~~~~~--~~t~------~~py~~e~--sq 207 (985)
-.|| .+++++..+...|.+|+.++.. +.+-.|.|-- ...|.-.+..|.- |+.. ..--||.. |.
T Consensus 28 ~~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~ger----e~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss 101 (444)
T TIGR03531 28 RKIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGER----EGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSS 101 (444)
T ss_pred CcCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCcc----cceeechhhhhcccceecCCCCcccccccCccccCcc
Confidence 3677 6899999999999999987642 3333455531 1122112222222 2111 12345552 33
Q ss_pred HHHHHHHHHHHHHHHhhCCCCc-ceeeccchHH-HHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEE
Q 001990 208 GRLESLLNFQTMIADLTGLPMS-NASLLDEGTA-AAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (985)
Q Consensus 208 g~l~~i~e~q~~ia~L~g~~~~-~~sl~~~~ta-~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~ 285 (985)
.......+++..+++++|.+.. .+.+++++|+ +...++++++..+.++++||+++..|.++.+++.. .|+++++
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~----~G~~pv~ 177 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST----AGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH----cCCeEEE
Confidence 4667788899999999999732 3667889985 44434445442211579999999999999998754 5777777
Q ss_pred eCc-----------hhhhc-cCC---CEeEEEEEcCCCC--eeeccHHHHHHHHHhCCcEEEEEeccccccCCC------
Q 001990 286 SDL-----------KDIDY-KSG---DVCGVLVQYPGTE--GEVLDYGDFIKNAHANGVKVVMATDLLALTILK------ 342 (985)
Q Consensus 286 ~~~-----------~~l~~-l~~---~t~~V~v~~pn~~--G~i~dl~~I~~~a~~~galliV~a~~~alg~l~------ 342 (985)
+|+ ++|++ +++ ++.++++.+|+++ |..+|+++|+++|+++|++++||+ ..+.+...
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa-Ayg~~~~~~~~~~~ 256 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN-AYGLQSNKYMELIN 256 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC-cCcCcChhhhhhhh
Confidence 762 34555 654 5566777777655 478999999999999999999953 23332211
Q ss_pred CCCccc-ceEEEecC-ccccccCCCCCCceEEEEE-chhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCC
Q 001990 343 PPGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (985)
Q Consensus 343 ~p~~~G-aDi~v~s~-k~lg~P~~~GGP~~G~l~~-~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsn 419 (985)
...+.| +|+++.+. |++..|.+ .|++++ ++++.+.+.. . | .. +. ++
T Consensus 257 ~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~-------~------y---------~g-~~---~~ 305 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISK-------S------Y---------PG-RA---SA 305 (444)
T ss_pred ccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHH-------h------c---------cC-CC---CC
Confidence 123354 79999998 88876521 356666 4556555410 0 0 00 11 00
Q ss_pred ccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCcce--EEEecC----C-HHHH
Q 001990 420 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFDT--VKVKCA----D-AHAI 488 (985)
Q Consensus 420 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~~~--~~i~~~----~-~~~l 488 (985)
... +.+.+.+..+|.+|++++.++..++++++.+.|+++ | .++++.+ .++ +.+... . ...+
T Consensus 306 ----s~~--~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~-~~~~~~~-~n~is~~~~~~~~~~~~~~~~ 377 (444)
T TIGR03531 306 ----SPS--LDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHG-ERLLDTP-ENPISSAMTLSTLKGKDPTML 377 (444)
T ss_pred ----hHH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cEeecCC-CCceeEEEecccccccCHHHH
Confidence 122 222333468899999999999999999999999875 4 5666432 122 223322 2 7788
Q ss_pred HHHHHHcCcee-eee---------------c--------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 489 ASAAYKIEMNL-RVV---------------D--------SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 489 ~~~L~~~Gi~~-~~~---------------~--------~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
...|..+++-- +.+ + ...+.+......+++|||.|++.|..
T Consensus 378 g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~ 442 (444)
T TIGR03531 378 GSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEK 442 (444)
T ss_pred HHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhh
Confidence 88898887731 110 0 01244444556788999999988864
No 379
>PRK07908 hypothetical protein; Provisional
Probab=99.62 E-value=6.2e-14 Score=159.94 Aligned_cols=280 Identities=15% Similarity=0.108 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.+++.+|.+...+..++|++. +..++++ + .+ +.+++..+.+..+...++..|++++.+|.++++
T Consensus 60 ~~~lr~aia~~~~~~~~~I~it~Ga~~--al~~~~~-l------~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~ 129 (349)
T PRK07908 60 ERRARAAVAARHGRTPDEVLLLAGAAE--GFALLAR-L------RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPF 129 (349)
T ss_pred hHHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHh-c------CC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCccc
Confidence 346788899999988766666555541 2222232 1 23 346666554444445567899999999998767
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccC-CCCCCcCC-Cc-EEEe
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LTSPGYIG-AD-VCHL 789 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g-~~~~g~~g-~D-i~~~ 789 (985)
.+|++++ + ++++++++++| |++|.+. +.++|.++|++ +.++++|+++..-..+ ........ .+ +++.
T Consensus 130 ~~d~~~l----~---~~~~~i~l~np~NPTG~~~-~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~ 200 (349)
T PRK07908 130 RLDPAAV----P---DDADLVVIGNPTNPTSVLH-PAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLR 200 (349)
T ss_pred CcChhHh----c---cCCCEEEEcCCCCCCCCCc-CHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEe
Confidence 8888854 3 56788999999 5799998 79999999964 8899999987421111 11111111 23 4455
Q ss_pred CCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHH
Q 001990 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (985)
Q Consensus 790 s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~ 869 (985)
|++|+|+. .|.++|++++++++++.+..... . .++++ ....++.+++...+.+-++
T Consensus 201 S~SK~~~l----~GlRiG~~~~~~~~~~~~~~~~~------------~--~~~~~------~~~~a~~~~~~~~~~~~~~ 256 (349)
T PRK07908 201 SLTKTWSL----AGLRVGYALGAPDVLARLTRGRA------------H--WPVGT------LQLEAIAACCAPRAVAEAA 256 (349)
T ss_pred ecccccCC----ccceeeeeecCHHHHHHHHhcCC------------C--CCccH------HHHHHHHHHhcccchHHHH
Confidence 88898854 47889999998877655432100 0 01111 1111111222211122344
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CCC--CCCEEE
Q 001990 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP--VPGTLM 946 (985)
Q Consensus 870 ~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~p--v~~~lr 946 (985)
+..++..++.+++.+.|++. .+.+..+.+. ..+.++++ +...+.+.|.++||.+... .++ .++++|
T Consensus 257 ~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g--~~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vR 325 (349)
T PRK07908 257 ADAARLAADRAEMVAGLRAV-GARVVDPAAA--PFVLVRVP--------DAELLRKRLRERGIAVRRGDTFPGLDPDYLR 325 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CcEeccCCCc--eEEEEECC--------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEE
Confidence 45556677788888888772 2222222121 12334443 2567888899999987432 232 257999
Q ss_pred EeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 947 IEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 947 is~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
|++ .+++|++ +|+++|++++.
T Consensus 326 is~---~~~~~~~---~l~~al~~~~~ 346 (349)
T PRK07908 326 LAV---RPRAEVP---VLVQALAEILK 346 (349)
T ss_pred EEe---CCCccHH---HHHHHHHHHHh
Confidence 998 5788999 99999988653
No 380
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.62 E-value=7.1e-14 Score=162.54 Aligned_cols=306 Identities=13% Similarity=0.063 Sum_probs=184.2
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--ccceecChH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~--~~~~~~~sG-a~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++++.+|.+ ..++..++| ++|...++ +.. .++++.|+++++.|..++..+...|.++
T Consensus 70 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~---~~~-----~~~gd~vl~~~p~y~~y~~~~~~~~~~~ 141 (402)
T PRK06107 70 NGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL---MAT-----LEAGDEVIIPAPYWVSYPDMVLANDGTP 141 (402)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH---HHh-----cCCCCEEEEecCCCcCHHHHHHHcCCEE
Confidence 677777888888888888874 334545554 45543332 222 1467899999988878877777888888
Q ss_pred EEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHc-CCEEEEEcccccc-ccC--
Q 001990 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDN-GGQVYMDGANMNA-QVG-- 775 (985)
Q Consensus 705 ~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~-g~lliVD~a~~~~-~~g-- 775 (985)
+.++++. ++.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++ |+++++|.++..- ..+
T Consensus 142 ~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~ 218 (402)
T PRK06107 142 VIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP 218 (402)
T ss_pred EEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC
Confidence 8888753 35689999999886 68889999998 5899875 2478889999998 9999999987411 011
Q ss_pred CCCCCc----C-CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 776 LTSPGY----I-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 776 ~~~~g~----~-g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
+..... + +--+++.|++|.|+.| |.++|++++++++.+.+.... .....+.+...+
T Consensus 219 ~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~s~~~q- 279 (402)
T PRK06107 219 TPHLLAAAPELRDRVLVTNGVSKTYAMT----GWRIGYAAGPADLIAAINKLQ--------------SQSSSCPSSISQ- 279 (402)
T ss_pred CCCHHHhCcCccCCEEEEeccchhhcCc----ccceeeeecCHHHHHHHHHHH--------------HhcccCCChHHH-
Confidence 111011 1 1235677889998544 678999998887665442110 000111111111
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCcc---ccCC---CCHHHHH
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK---NTAG---IEPEDVA 924 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~---~~~g---~~~~~l~ 924 (985)
.++..+|. -+..-+++..+...++.+.+.+.|++...+.+..+.+.++ +.++++.+. ...+ .+..++.
T Consensus 280 ---~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
T PRK06107 280 ---AAAAAALN-GDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY--LYVNCAGLIGKTTPEGKVLETDQDVV 353 (402)
T ss_pred ---HHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EeeecccccccccccccCCCCHHHHH
Confidence 11122222 1222344444555677788888887621222222222222 223332110 0011 1456777
Q ss_pred HHH-HHCCCccCCC-CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 925 KRL-MDYGFHGPTM-SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 925 ~~L-~e~Gi~~~~~-~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+.| .++||.+... .|..++++|+++. .++|+++ +.++.|++.+++
T Consensus 354 ~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~---~~l~~l~~~l~~ 400 (402)
T PRK06107 354 LYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLE---EACARIERAVAA 400 (402)
T ss_pred HHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHH---HHHHHHHHHHHh
Confidence 665 5679987432 2334589999998 3688888 888888776654
No 381
>PRK07683 aminotransferase A; Validated
Probab=99.62 E-value=1.2e-13 Score=159.71 Aligned_cols=299 Identities=15% Similarity=0.131 Sum_probs=179.1
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Ccc-ceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~-~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~ 703 (985)
+|..++...+.+++.+.+|. +.. .+.. ++++++.. ++++.+. .++++|+++.+.+..+...++..|++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 136 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAID---IAFRTIL-----EPGTEVILPAPIYPGYEPIIRLCGAK 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH---HHHHHhC-----CCCCEEEEcCCCccchHHHHHHcCCE
Confidence 56555555555555554464 333 4444 44454443 2233221 36789999998777777777889999
Q ss_pred EEEEeCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccccC--CC
Q 001990 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG--LT 777 (985)
Q Consensus 704 v~~v~~~~~-g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~g--~~ 777 (985)
++.++.+.+ ..+|++++++.++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++...... ..
T Consensus 137 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 213 (387)
T PRK07683 137 PVFIDTRSTGFRLTAEALENAIT---EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT 213 (387)
T ss_pred EEEeecCcccCCCCHHHHHHhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC
Confidence 999998754 4678999999887 67889999998 5799974 25899999999999999999997532111 00
Q ss_pred CCCc----CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHH
Q 001990 778 SPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (985)
Q Consensus 778 ~~g~----~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~ 853 (985)
.... .+-.+++.|+.|.|+.| |.++|++++++++++.+.... .....+.+ . ...
T Consensus 214 ~~~~~~~~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~l~~~~~~~~--------------~~~~~~~~---~-~~q 271 (387)
T PRK07683 214 SIAHFPEMREKTIVINGLSKSHSMT----GWRIGFLFAPSYLAKHILKVH--------------QYNVTCAS---S-ISQ 271 (387)
T ss_pred ChhhccCCcCCeEEEeeccccccCc----cceeEEEEcCHHHHHHHHHHH--------------HhccCCCC---h-HHH
Confidence 0011 12246678888888654 678999999887665432110 00011111 1 111
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHH-HHHCC
Q 001990 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR-LMDYG 931 (985)
Q Consensus 854 ~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~-L~e~G 931 (985)
.++...+. .+..-+.+..++..++.+++.+.|++ ++.+ ..+.+.++ +.+.++. .+.+..++++. |.++|
T Consensus 272 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~--~~~~~~~----~~~~~~~~~~~ll~~~g 342 (387)
T PRK07683 272 YAALEALT-AGKDDAKMMRHQYKKRRDYVYNRLISMGLDV--EKPTGAFY--LFPSIGH----FTMSSFDFALDLVEEAG 342 (387)
T ss_pred HHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHcCCcc--cCCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCC
Confidence 11222222 23232334445556777888888876 3332 12222222 2333321 13456677766 46789
Q ss_pred CccCCCC-C-C-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 932 FHGPTMS-W-P-VPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 932 i~~~~~~-~-p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
|.+.... | + .++.+||+++. +++++. ..++.|.++++
T Consensus 343 I~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~---~al~~l~~~l~ 382 (387)
T PRK07683 343 LAVVPGSAFSEYGEGYVRLSYAY--SIETLK---EGLDRLEAFLQ 382 (387)
T ss_pred EEEcCchhhCCCCCCeEEEEecC--CHHHHH---HHHHHHHHHHH
Confidence 9874321 2 2 25789999874 577777 77777776554
No 382
>PRK07046 aminotransferase; Validated
Probab=99.62 E-value=5.3e-14 Score=164.78 Aligned_cols=299 Identities=15% Similarity=0.125 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHh------------
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAM------------ 699 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~------------ 699 (985)
...++.+.++++++++. ..+.+||++++++++..+|.| ++|++||. ...+||.+......
T Consensus 116 ~~~~lAe~l~~~~~~~~-v~F~nSGtEA~e~AlrlAR~~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~ 188 (453)
T PRK07046 116 DAAWVGEELARRFGLPY-WQVATTATDANRFVLRWARAV------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGL 188 (453)
T ss_pred HHHHHHHHHHHHhCCCE-EEEECCHHHHHHHHHHHHHHh------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCC
Confidence 34578888999887654 467899999998888888876 35677775 66799986544311
Q ss_pred cCc------EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccc
Q 001990 700 CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGAN 769 (985)
Q Consensus 700 ~G~------~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~ 769 (985)
.|+ .+..+|. .|++++++.+. .+++++|+++-. ...|.+.++ ++++.++|+++|+++|+|+++
T Consensus 189 ~g~~~~~~~~~~~~~~-----nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~ 261 (453)
T PRK07046 189 LGQVHDLTATTRVVEF-----NDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETH 261 (453)
T ss_pred CCCCccccCceEeeCC-----CCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 111 1222333 38999999995 367888888642 345766532 899999999999999999998
Q ss_pred c--ccccCCCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccc
Q 001990 770 M--NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (985)
Q Consensus 770 ~--~~~~g~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~ 847 (985)
. .+.++...--..-+|++++ .|.+ ++|-| +|.+++++++++.+.... .. ...+.....+++.
T Consensus 262 tfr~g~Gg~~~~~gv~PDi~t~--gK~l----ggG~P-i~av~g~~~i~~~~~~~~--~~-------~~~~~~~~~~T~~ 325 (453)
T PRK07046 262 TISSGPGGYTRAHGLEPDFLVV--GKPI----AGGVP-CAVYGFSAELAERAQAAK--AS-------APPGHSGIGTTLS 325 (453)
T ss_pred cCccCCcchhHHhCCCccceee--hhhh----cCCCc-ceeeeehHHHHHHHhhcc--cc-------CCCCCceeCCCCc
Confidence 5 2344331111123798865 3776 44445 778888887765542100 00 0000111223455
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-----cCCeeEcCCCCceeEEEEEEecCcccc----CCC
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-----HYPILFRGVNGTVAHEFIVDLRGLKNT----AGI 918 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-----~~~i~~~g~~~~~~~~~vv~~~~~~~~----~g~ 918 (985)
|+++.++++.+.|..+..+++ .++..+..++|+++|++ ++...+.+. +..+ .+.+.-+..... ...
T Consensus 326 gnpl~~aa~~a~L~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~-G~~~-~i~~~~~~~~~~~~~~~~~ 400 (453)
T PRK07046 326 ANALAMAAMRATLAEVMTEAA---YAHMLALAARLAAGLRAVIARHGLPWHVTRV-GARV-EFQFAPTPPRNGAEAAAAL 400 (453)
T ss_pred ccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe-CcEE-EEEEeCCCCCCHHHHhccc
Confidence 677788888888888865543 34566677888888864 122222222 1111 222211100000 000
Q ss_pred C---HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 919 E---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 919 ~---~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+ ...+...|.++|+++... .+.+++++. +|++||| ++++++.++++++
T Consensus 401 ~~~~~~~~~~~~~~~Gv~~~~~----~~~~~~~p~--~t~~did---~~~~~~~~~l~~~ 451 (453)
T PRK07046 401 DPELEAALHLYLLNRGVLITPF----HNMMLVCPA--TTAADVD---RLVAAFDACLGEL 451 (453)
T ss_pred CHHHHHHHHHHHHHCCCEEecc----cCcEEEeCC--CCHHHHH---HHHHHHHHHHHHH
Confidence 1 235667788999987421 355778874 8999999 9999999988765
No 383
>PRK07036 hypothetical protein; Provisional
Probab=99.62 E-value=2e-13 Score=160.67 Aligned_cols=307 Identities=16% Similarity=0.195 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc---------
Q 001990 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~--------- 702 (985)
..++.+.|++++..+. ..++.+||+++++++++.+|.|...+|.+++.+||. ..++||.........|-
T Consensus 97 ~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~ 176 (466)
T PRK07036 97 AAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDY 176 (466)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccC
Confidence 4567788888874322 347789999999999999988765555444566775 66789977544332211
Q ss_pred ---EEEEEeCCC-----CCC-------CCHHHHHHHHHh-cCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCE
Q 001990 703 ---KIVSVGTDA-----KGN-------INIEELRKAAEA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQ 762 (985)
Q Consensus 703 ---~v~~v~~~~-----~g~-------iDle~L~~~i~~-~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~l 762 (985)
.+..+|... .+. ..++.+++.+.. +.+++++|+++.. ...|.+.+| +++|.++|++||++
T Consensus 177 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 256 (466)
T PRK07036 177 ASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDIL 256 (466)
T ss_pred CCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 133343311 011 013456666653 3467888888753 356776522 99999999999999
Q ss_pred EEEEccccccccCCCCCCc-------C--CCcEEEeCCcccccccCCCC-CCcceeeeecccccCcCCCC-ccccCCCCC
Q 001990 763 VYMDGANMNAQVGLTSPGY-------I--GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKKHLAPFLPSH-PVVSTGGIP 831 (985)
Q Consensus 763 liVD~a~~~~~~g~~~~g~-------~--g~Di~~~s~hKtl~~p~g~G-GPg~G~l~~~~~l~~~lpg~-~~g~~~~~~ 831 (985)
+|+|+++. |+.+.|+ + .+|++++ .|.++ +| -| +|.+++++++.+.+... ..+.
T Consensus 257 lI~DEV~t----GfGRtG~~~~~~~~~gv~PDivt~--gK~l~----gG~~P-i~av~~~~~i~~~~~~~~~~~~----- 320 (466)
T PRK07036 257 YISDEVVT----GFGRLGHFFASEAVFGIQPDIITF--AKGLT----SGYQP-LGAVIISERLLDVISGPNAKGN----- 320 (466)
T ss_pred EEEeechh----CCCcCchhhhhhhhcCCCCCEEEE--ccccc----cCccc-cEEEEEcHHHHHHHhcccCcCc-----
Confidence 99999873 3333321 2 3788876 37763 23 14 66677887776544210 0000
Q ss_pred CCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--EcCCCCceeEEEEE
Q 001990 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIV 907 (985)
Q Consensus 832 ~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~--~~g~~~~~~~~~vv 907 (985)
.. ...+++.|+++.++++.+.|..+.++++. ++..+..++|+++|++. ++++ ..|. + .+ +.+
T Consensus 321 ------~~-~~~~T~~gnpl~~aaa~a~Le~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-G-l~--~~v 386 (466)
T PRK07036 321 ------VF-THGFTYSGHPVACAAALKNIEIMEREGLC---EHVREVGPYFEERLASLRELPLVGDVRGD-H-LM--ACV 386 (466)
T ss_pred ------cc-ccCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhccCCCEEEEEee-c-eE--EEE
Confidence 00 01123445777788888888888666543 45667778888888652 2221 1121 1 11 223
Q ss_pred EecCccccC---CC---CHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 908 DLRGLKNTA---GI---EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 908 ~~~~~~~~~---g~---~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.+..-+... .. ....+.+.|.++|+.+... .+.++++|...+|++||| +++++|.++++++.+
T Consensus 387 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----~~~~~l~Ppl~it~~~id---~~~~~l~~al~~~~~ 455 (466)
T PRK07036 387 ECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL----EHLCVLSPPLIITRAQID---EIVAILRAAIEETAD 455 (466)
T ss_pred EEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec----CCEEEEeCCCcCCHHHHH---HHHHHHHHHHHHHHH
Confidence 221000000 00 1346778889999987422 367999999999999999 999999988877643
No 384
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=8.2e-14 Score=161.94 Aligned_cols=145 Identities=18% Similarity=0.206 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~ 708 (985)
...++++.++++.|.+.+ +.++||+.++.++++++. .++++||++...|+.+.. .+...|+++++++
T Consensus 70 t~~~le~~la~l~g~~~~-v~fsSG~~Ai~~al~~ll--------~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (437)
T PRK05613 70 TVEALENRIASLEGGVHA-VAFASGQAAETAAILNLA--------GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE 140 (437)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHhc--------CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC
Confidence 466899999999998654 666777766644443321 467899998877776532 2456899999997
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
+. .|+++++++++ ++|++|+++.+ |++|.+. ||++|+++||++|++++||++++.+. ...|.++|+|++
T Consensus 141 -~~---~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~-di~~I~~la~~~gi~livD~t~a~g~--~~~p~~~GaDiv 210 (437)
T PRK05613 141 -NP---DDPESWQAAVQ---PNTKAFFGETFANPQADVL-DIPAVAEVAHRNQVPLIVDNTIATAA--LVRPLELGADVV 210 (437)
T ss_pred -CC---CCHHHHHHhCC---ccCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCeEEEECCCcccc--ccChHHhCCCEE
Confidence 32 28999999997 78998888776 6788888 89999999999999999999985432 346667899999
Q ss_pred EeCCccccc
Q 001990 788 HLNLHKTFC 796 (985)
Q Consensus 788 ~~s~hKtl~ 796 (985)
++|+||+++
T Consensus 211 v~S~~K~l~ 219 (437)
T PRK05613 211 VASLTKFYT 219 (437)
T ss_pred Eeeccceec
Confidence 999999884
No 385
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.62 E-value=5.1e-14 Score=154.26 Aligned_cols=223 Identities=18% Similarity=0.144 Sum_probs=158.9
Q ss_pred HHHHHHHHHhcCccCcCcccccccceecccCcccc----cccc-ccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhC
Q 001990 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTE----MMPV-TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (985)
Q Consensus 572 e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~----~~~~-~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G 646 (985)
.++-++.+++.+... ..+||-|.+..+++.- ++.. ..+.+..|++ .-|..++...+.+++++++|
T Consensus 18 ~vw~e~~~la~e~~~----~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~------~~G~p~L~~aL~k~~se~~~ 87 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKV----PNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTR------GYGLPQLRKALAKAYSEFYG 87 (420)
T ss_pred cHHHHHHHHHHhcCC----CCcccCCCCCCCCcHHHHHHHHHHhccchhccccc------cCCchHHHHHHHHHHHHHhc
Confidence 566667777766532 2238877776665422 2112 2222333443 24677788888999999887
Q ss_pred CCc---cceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC--------CCCC
Q 001990 647 FDS---FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--------AKGN 714 (985)
Q Consensus 647 ~~~---~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~--------~~g~ 714 (985)
... ..+++++|+. +..++++++. +++|+||+.++++..+....++.|..++.|+.. +++.
T Consensus 88 ~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 88 GLLDPDDEVLVTAGANEAISSALLGLL--------NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred cccCCcccEEEecCchHHHHHHHHHHc--------CCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 532 3466666654 4433444332 578999999997777777788999999999876 3478
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccc-cccC------CCCCCcCCC
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG------LTSPGYIGA 784 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~-~~~g------~~~~g~~g~ 784 (985)
+|.++++.+++ ++|++|++++| |++|-+- +.+++|+++|++||++++.|.++-. ...+ ...||.+..
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~er 236 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYER 236 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhhe
Confidence 99999999998 89999999999 6899885 3599999999999999999988621 0011 112777777
Q ss_pred cEEEeCCcccccccCCCCCCcceeeeecccccCcC
Q 001990 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (985)
Q Consensus 785 Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~l 819 (985)
-+-++|+.|+|++ -|+++|+++.++++...+
T Consensus 237 titvgS~gKtf~~----TGWrlGW~igp~~L~~~~ 267 (420)
T KOG0257|consen 237 TITVGSFGKTFGV----TGWRLGWAIGPKHLYSAL 267 (420)
T ss_pred EEEeccccceeee----eeeeeeeeechHHhhhhH
Confidence 8889999999964 689999999977776543
No 386
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.62 E-value=2e-14 Score=154.19 Aligned_cols=285 Identities=15% Similarity=0.181 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.||+|.+-+.+. .++|--.++-+.|..+-.- -|+-+ |.++. .|+++ ++..+++-..+..
T Consensus 218 hv~LE~eLA~LHqK~aAL-lFsSCfVANDstLftLak~------lpgce-i~SD~---gNHASMI~GIrns~v~K~IFrH 286 (570)
T KOG1360|consen 218 HVRLEAELADLHQKEAAL-LFSSCFVANDSTLFTLAKK------LPGCE-IFSDE---GNHASMIQGIRNSRVPKHIFRH 286 (570)
T ss_pred hhhHHHHHHHHhcCccee-eeeeeeeccchHHHHHHHH------CCCcE-Eeccc---cchHHHHHHhhhcCCcceeecc
Confidence 447889999999887652 2223222333333322110 25554 44443 34444 3445555445555
Q ss_pred CCCCCCCHHHHHHHHHhcCCC-eEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC------CCCc
Q 001990 710 DAKGNINIEELRKAAEANRDN-LSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPGY 781 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~-t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~------~~g~ 781 (985)
.|+++|++++.+.+++ .+.|..+.. +..|.+- ||+||++++|+||++..+|++|++++.|-- ++|-
T Consensus 287 -----ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc-pleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGv 360 (570)
T KOG1360|consen 287 -----NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC-PLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGV 360 (570)
T ss_pred -----CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC-CHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCc
Confidence 4999999999865443 455556554 6789998 899999999999999999999987775431 1221
Q ss_pred -CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcC----CCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHH
Q 001990 782 -IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL----PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (985)
Q Consensus 782 -~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~l----pg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A 856 (985)
...||+++++.|.|+. -+||++....+++.+ +|.++. .+.+ +..++.|
T Consensus 361 m~kvDiIsGTLgKafGc-------VGGYIAat~~LvDmiRSyAaGFIFT-----------TSLP---------P~vl~GA 413 (570)
T KOG1360|consen 361 MHKVDIISGTLGKAFGC-------VGGYIAATRKLVDMIRSYAAGFIFT-----------TSLP---------PMVLAGA 413 (570)
T ss_pred chhhhhcccchhhhccc-------ccceehhhhhHHHHHHHhcCceEEe-----------cCCC---------hHHHHhH
Confidence 2379999999998843 347888887666543 343321 1111 1223334
Q ss_pred HHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCc
Q 001990 857 YTYIAMMG-SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 933 (985)
Q Consensus 857 ~a~l~~lg-~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~ 933 (985)
...++.+. .+|. ...+....+.+|+++.|.+ |+.++.. + .|++-+.+.. .....++.+.|. +.||+
T Consensus 414 leaVr~lk~~eg~-~lR~~hqrnv~~~kq~l~~~GiPVi~~-p----SHIiPv~vgd-----a~l~~~~sd~Li~~h~iY 482 (570)
T KOG1360|consen 414 LEAVRILKSEEGR-VLRRQHQRNVKYVKQLLMELGIPVIPN-P----SHIIPVRVGD-----AALAKQASDILISKHNIY 482 (570)
T ss_pred HHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHcCCcccCC-C----cceeeeeccC-----HHHHHHHHHHHHHhcCeE
Confidence 45555553 3443 3344566778999999987 7776532 1 2344444421 123456777775 56999
Q ss_pred cCCCCCC-C---CCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 934 GPTMSWP-V---PGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 934 ~~~~~~p-v---~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+-.+.|| | ...+||.||+.+|++-++ .|+++|..++.++.
T Consensus 483 vQaINyPTV~rG~E~LRiaPTP~HT~~mm~---~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 483 VQAINYPTVARGTERLRIAPTPHHTPQMMN---ILVNALLDVWNEVG 526 (570)
T ss_pred EEeccCCcccccceeeecCCCCCCCHHHHH---HHHHHHHHHHHHcC
Confidence 8777776 3 357999999999999999 99999999988753
No 387
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=8e-14 Score=162.46 Aligned_cols=152 Identities=23% Similarity=0.251 Sum_probs=123.6
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+. +.++.+|++++++++.++ .. +||+||++...|+.+...+...++..|++++++|. ++
T Consensus 66 ~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~al-l~--pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (427)
T PRK05994 66 AVLEERVAALEGGTA--ALAVASGHAAQFLVFHTL-LQ--PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPAS 140 (427)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 357789999999876 678899999888877665 33 88999999999998888776666678999999875 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|+ |.+++| ||
T Consensus 141 l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~pl~~gaDivv~S~tK~lgg~---~~ 216 (427)
T PRK05994 141 FERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD-NTLASPYLIRPIEHGADIVVHSLTKFLGGH---GN 216 (427)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCcEEEEcCccccCCC---CC
Confidence 666 7889999999988 78999999999999999999999995 45566666677889999999998 777643 34
Q ss_pred CceEEEE
Q 001990 368 PHAAFLA 374 (985)
Q Consensus 368 P~~G~l~ 374 (985)
+-.|++.
T Consensus 217 ~~gG~v~ 223 (427)
T PRK05994 217 SMGGIIV 223 (427)
T ss_pred cEEEEEE
Confidence 4456554
No 388
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=1.5e-13 Score=158.86 Aligned_cols=273 Identities=15% Similarity=0.128 Sum_probs=181.7
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+. ..++.+|++++..+++++ .. +||+|+++...|+.+...++.+++..|++++.++. ++
T Consensus 63 ~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~al-l~--pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 63 DLLGEALAELEGGAG--GVITATGMGAINLVLNAL-LQ--PGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred HHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHH-hC--CCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346689999999754 567888888877766665 33 89999999999998877777766778999988865 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|+ |.|++|- +
T Consensus 138 l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD-~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~---~ 213 (405)
T PRK08776 138 LADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD-NTFLSPALQKPLEFGADLVLHSTTKYINGHS---D 213 (405)
T ss_pred HHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCCcccccCCcccccCCEEEecCceeecCCC---C
Confidence 666 7788999999998 78999999999999999999999995 34455555567789999999998 8886542 1
Q ss_pred CceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
--.|.+.++ +++.+++-. .+..-| .+ .+++- .++...|.+-++.+
T Consensus 214 ~~~G~vv~~~~~l~~~l~~-------------------------~~~~~g---~~-~s~~~-----a~l~~~gl~tl~~r 259 (405)
T PRK08776 214 VVGGAVVARDAELHQQLVW-------------------------WANALG---LT-GSPFD-----AFLTLRGLRTLDAR 259 (405)
T ss_pred ceEEEEEeCCHHHHHHHHH-------------------------HHHhcC---CC-CCHHH-----HHHHHhhhCcHHHH
Confidence 124555554 444443300 000001 11 01221 11233445556777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHH--cCceee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~----~~~l~~~L~~--~Gi~~~--- 500 (985)
.++..+++..+.+.|++...++ +. +. + +..-|+|.+++ +.++.+.|.= .+..+.
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 339 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVE 339 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCCCCc
Confidence 7888999999999999875454 22 11 1 11246777654 2334444431 122110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+ +.++.+|+|++.-+.++-|+.|.++|..
T Consensus 340 sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 340 SLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred eEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 0 1246799999988777767777777764
No 389
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=6.9e-14 Score=160.92 Aligned_cols=208 Identities=20% Similarity=0.173 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH---HhcCcEEEEEeCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~---~~~G~~v~~v~~~ 710 (985)
..++++.+|+++|.+.+ +.+++|+.|+.+++.++. .++|+||++...|+.+...+ ...|++++.+..
T Consensus 55 ~~~lE~~lA~l~g~~~~-l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~- 124 (385)
T PRK08574 55 LRPLEEALAKLEGGVDA-LAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP- 124 (385)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC-
Confidence 55799999999998765 556778776654444332 46789999988787665443 446888877643
Q ss_pred CCCCCCHHHHHHHHHhcCC-CeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 711 AKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~~~~-~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
|+++++++++ + ++++|++++| |++|.+. |+++|+++||++|+++++|++++.+. ...+..+|+|+++
T Consensus 125 -----d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~l~~GaDivv 193 (385)
T PRK08574 125 -----STEDIIEAIK---EGRTKLVFIETMTNPTLKVI-DVPEVAKAAKELGAILVVDNTFATPL--LYRPLRHGADFVV 193 (385)
T ss_pred -----CHHHHHHhcC---ccCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCccc--cCChhhhCCcEEE
Confidence 6899999997 5 8999999988 5799987 89999999999999999999985432 2345568899999
Q ss_pred eCCcccccccCCCCCCcceeeee-cccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~-~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+|++|+|+.| |..-+|.+++ ++++...+... + ..++...+ + ..|| +...+-+-
T Consensus 194 ~S~sK~l~g~---~d~~gG~vi~~~~~~~~~~~~~------------~-~~~g~~~~-----p---~~a~--l~l~~l~t 247 (385)
T PRK08574 194 HSLTKYIAGH---NDVVGGVAVAWSGEFLEELWEW------------R-RRLGTIMQ-----P---FEAY--LVLRGLKT 247 (385)
T ss_pred eeCceeecCC---CCceeEEEEECcHHHHHHHHHH------------H-HhcCCCCC-----H---HHHH--HHHcccCc
Confidence 9999998422 1112464444 45544332100 0 00011111 1 1122 23334445
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+..+.++..+++.++.+.|++
T Consensus 248 L~~R~~~~~~na~~la~~L~~ 268 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSE 268 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 666777888899999999986
No 390
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=6.4e-14 Score=162.88 Aligned_cols=294 Identities=17% Similarity=0.147 Sum_probs=185.7
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~l 291 (985)
++++.+|++.|.+. +.++.+|++++.++++++. . +||+||++...|+.+...+....+..|+++.+++. +++
T Consensus 62 ~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~-~--~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 62 VLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA-E--AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred HHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh-C--CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 57799999999765 6688999988888777652 3 78999999999987777776555667899888854 566
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001990 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (985)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP 368 (985)
++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+||+++|+ |+++++ |..
T Consensus 137 e~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD-~a~a~~~~~~p~~~gaDivv~S~tK~l~G~---g~~ 212 (425)
T PRK06084 137 EALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVD-NTVATPVLCRPFEHGADIVVHSLTKYIGGH---GTS 212 (425)
T ss_pred HHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCCEEEECchhccccc---ccc
Confidence 66 7788999999988 89999999999999999999999994 46677766777889999999998 888653 222
Q ss_pred ceEEEEEchhh-HhcCCCceeeeeecCCCCcc-eEEecccccccc-------cc---cccCCCccchhHHHHHHHHHHHH
Q 001990 369 HAAFLATSQEY-KRMMPGRIVGVSIDSSGKPA-LRVAMQTREQHI-------RR---DKATSNICTAQALLANMAAMYAV 436 (985)
Q Consensus 369 ~~G~l~~~~~~-~~~lp~~~vG~s~d~~g~~~-~~l~l~tre~~~-------rr---e~atsni~t~~~l~a~~aa~y~~ 436 (985)
-.|++..+... ...+..+. ++-.. ..+. +.+.+ .+.+. +| ..+. +.+ .++ .- .|+.
T Consensus 213 ~gG~v~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~-g~~-l~~---~~--a~l~ 280 (425)
T PRK06084 213 IGGIVVDSGKFPWAEHKERF-ALLNT--PDPSYHGVTY--TEAFGPAAFIGRCRVVPLRNM-GAA-LSP---FN--AFLI 280 (425)
T ss_pred eeEEEEeCCccchhhccccc-ccccc--CCcccccchh--hhhcchHHHHHHHHHHHHHhc-CCC-CCH---HH--HHHH
Confidence 23555543321 01110000 10000 0000 11100 00000 00 0011 110 011 11 2345
Q ss_pred HcCcchHHHHHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C----------C-c-ceEEEecCC----HHHHHHHHHH
Q 001990 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P----------F-F-DTVKVKCAD----AHAIASAAYK 494 (985)
Q Consensus 437 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~----------~-~-~~~~i~~~~----~~~l~~~L~~ 494 (985)
..|-+.+..+.++..++|..+++.|+++++++ |. +. | . + .-|+|.+.+ +.++.+.|.=
T Consensus 281 lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l 360 (425)
T PRK06084 281 LQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKL 360 (425)
T ss_pred HcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCc
Confidence 66677788888888999999999999986454 32 11 1 1 1 247777654 3344444431
Q ss_pred c--Cceee--------e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 495 I--EMNLR--------V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 495 ~--Gi~~~--------~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
. +..+. + +.++.+|+|++.-+.++=|+.|.++|..
T Consensus 361 ~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 361 VVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIEHIDDIIADLAQALDA 422 (425)
T ss_pred ceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 1 12110 0 1246789999987766666777777754
No 391
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=1.6e-13 Score=157.84 Aligned_cols=273 Identities=15% Similarity=0.118 Sum_probs=184.4
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+ .+.++.+|++++..+++++ .. +||+|++++..|+++...+..++...++++..++. ++
T Consensus 55 ~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l-~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 55 DVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVF-LK--PGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-cC--CCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 34678999999965 4788899998887776654 23 89999999999998888887666666778887753 55
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ +++++++|++.+| |++|.+.|+++|.++||++|++++|| +..+.+....|.++|+|++++|. |+++++-+
T Consensus 130 l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD-eay~~~~~~~pl~~gaDivv~S~tK~l~G~~d--- 205 (386)
T PRK08045 130 LRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHSD--- 205 (386)
T ss_pred HHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCCEEEeecceeccCCCC---
Confidence 666 7788999999998 68999999999999999999999995 44555555667889999999998 87764321
Q ss_pred CceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
--.|++.++ +++.+.+. +.+....+|. +++ ..|+...|-+-+..+
T Consensus 206 ~~~G~vi~~~~~~~~~l~----------------------------~~~~~~g~~~-~p~-----~~~l~~rgl~tl~~R 251 (386)
T PRK08045 206 VVAGVVIAKDPDVVTELA----------------------------WWANNIGVTG-GAF-----DSYLLLRGLRTLVPR 251 (386)
T ss_pred ceeEEEEeCcHHHHHHHH----------------------------HHHHhcCCCC-CHH-----HHHHHHhhhccHHHH
Confidence 114566553 44443320 0000011111 121 123455555667888
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHHc--Cceee---
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYKI--EMNLR--- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~----~~~l~~~L~~~--Gi~~~--- 500 (985)
.+++.+++..++++|++.+.++ |. +. | +..-|+|..++ +.++.+.|.=. +..+.
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCc
Confidence 8899999999999999886454 32 11 1 11246676654 34444444321 21110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 501 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 501 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+ +.++.+|+|++.-+.++-++.|.++|..
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 382 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 0 1246899999988877777888888764
No 392
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.61 E-value=9.6e-14 Score=157.10 Aligned_cols=269 Identities=16% Similarity=0.137 Sum_probs=168.9
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~ 714 (985)
.++++++++++|.+...+..++|++.....+ .+. . .++ +|+++++.|..+...++..|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~--~~~-l-----~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLL--PRL-L-----APG-RVLVLAPTYSEYARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHH--HHH-h-----CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence 5788999999998765555555554222222 221 1 244 588888767666666788999998887
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccCCCCC----CcCCCcE
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADV 786 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~~~~----g~~g~Di 786 (985)
|+++++++++ ++++|++++| |++|.+. + +++|+++|+++|+++++|+++....... .. ...+.++
T Consensus 115 -d~~~l~~~~~----~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~i 187 (330)
T TIGR01140 115 -DLDRLPAALE----ELDVLVLCNPNNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFTPDA-SLAPQAARFPGLV 187 (330)
T ss_pred -CHHHHHhhcc----cCCEEEEeCCCCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccCCcc-chhhHhccCCCEE
Confidence 8899998874 4668888999 5799987 5 7778899999999999999974221111 11 1124468
Q ss_pred EEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 787 ~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++.|++|+|+.| |.++|+++++++++..+.... ...+++ .....++..++. ..
T Consensus 188 ~~~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~~--------------~~~~~s------~~~q~~~~~~l~---~~ 240 (330)
T TIGR01140 188 VLRSLTKFFGLA----GLRLGFVVAHPALLARLREAL--------------GPWTVN------GPARAAGRAALA---DT 240 (330)
T ss_pred EEEecchhhcCc----hhhhhheeCCHHHHHHHHhcC--------------CCCCch------HHHHHHHHHHHh---ch
Confidence 899999998543 567899999887765543210 000111 111122222332 33
Q ss_pred hH-HHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CCC--CC
Q 001990 867 GL-TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP--VP 942 (985)
Q Consensus 867 gl-~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~p--v~ 942 (985)
++ .+..++...+.+++.+.|++...+...+. ... .+.+++. +..++.++|.++||.+... .|+ -.
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~--f~~~~~~--------~~~~l~~~l~~~gi~v~pg~~f~~~~~ 309 (330)
T TIGR01140 241 AWQAATRARLAAERARLAALLARLGGLEVVGG-TAL--FLLVRTP--------DAAALHEALARRGILIRDFDNFPGLDP 309 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCe--EEEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCC
Confidence 33 34455667778888888887321222222 122 1334442 3578999999999986432 233 13
Q ss_pred CEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 943 GTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 943 ~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
+.+|++++. ..++ + +|+++|+
T Consensus 310 ~~iRi~~~~--~~~~-~---~~~~~l~ 330 (330)
T TIGR01140 310 RYLRFALPT--DEEN-D---RLEEALA 330 (330)
T ss_pred CEEEEEecC--HHHH-H---HHHHhhC
Confidence 689999853 3344 8 8888763
No 393
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=7.2e-14 Score=162.54 Aligned_cols=298 Identities=13% Similarity=0.115 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHH---HHHhcCc---EE-
Q 001990 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPA---TAAMCGM---KI- 704 (985)
Q Consensus 634 ~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~---~~~~~G~---~v- 704 (985)
..++.+.|+++++.. ...++.+||++++++++..+|.| ++|.+||. ...+||.... .....+- ..
T Consensus 95 ~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~ 168 (433)
T PRK00615 95 EILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGI------TGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLT 168 (433)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCCcccCcccccCCCCcCcCC
Confidence 456778888888643 23577899999999999988876 24566764 6678996522 1111110 00
Q ss_pred EEE--e-CCCC----CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccc
Q 001990 705 VSV--G-TDAK----GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 705 ~~v--~-~~~~----g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
... + .... ...|++++++.++++.+++++|+++.. +..|.+.++ +++|.++|++||+++|+|++|. ++
T Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~ 247 (433)
T PRK00615 169 HLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF 247 (433)
T ss_pred CCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc
Confidence 000 0 0000 123899999999766567787777643 456776522 6799999999999999999983 33
Q ss_pred -cC-CCCCCc--CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchh
Q 001990 774 -VG-LTSPGY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (985)
Q Consensus 774 -~g-~~~~g~--~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~ 849 (985)
.| ...... ..+|++++ .|.+ |+|.| +|++++++++++.+... + .....+++.|+
T Consensus 248 R~G~~ga~~~~gv~PDi~~~--gK~l----ggG~p-~~av~~~~~i~~~~~~~--~-------------~~~~~~T~~g~ 305 (433)
T PRK00615 248 RVAQGGAAAIYHVKPDITVY--GKIL----GGGLP-AAAVVAHKSIMDHLAPE--G-------------TIFQAGTLSGN 305 (433)
T ss_pred cccHhHHHHhcCCCCCeEEE--cccc----cCCcc-eeeeeecHHHHhhhcCC--C-------------CcccCCCCccc
Confidence 11 100011 23788765 4776 33434 67777888877665311 0 00011123346
Q ss_pred hhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-----cCCeeEcCCCCceeEEEEEEecCccccCC-------
Q 001990 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-----HYPILFRGVNGTVAHEFIVDLRGLKNTAG------- 917 (985)
Q Consensus 850 ~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-----~~~i~~~g~~~~~~~~~vv~~~~~~~~~g------- 917 (985)
+..++++.+.|..+.++.+ .++..++.++|.++|++ ++.+...+ .+.. +.+.+..-. ..+
T Consensus 306 p~~~aa~la~L~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~---~~i~~~~~~-~~~~~~~~~~ 377 (433)
T PRK00615 306 PLAMAAGKASINLCREQGF---YTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSM---FSFFFNENR-PNNLAEAQLS 377 (433)
T ss_pred HHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceE---EEEEEeCCC-CCChHHHhhC
Confidence 6677778888888866543 34556677778777654 23332221 1111 222222100 000
Q ss_pred --CCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 918 --IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 918 --~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.....+.+.|.++|+++....+| . ..++..+|++||| ++++++.++++.+-
T Consensus 378 ~~~~~~~~~~~l~~~Gv~~~~~~~~--~---~~ls~~ht~~did---~~~~a~~~~~~~~~ 430 (433)
T PRK00615 378 DIEAFQTFYQSAFSKGVYLSPSPFE--A---SFLSSAHSMENLD---YAQNVLIDSLEKVF 430 (433)
T ss_pred CHHHHHHHHHHHHHCCeeecCcccc--c---cceecCCCHHHHH---HHHHHHHHHHHHHh
Confidence 01236788899999997643332 1 2456678999999 99999999987653
No 394
>PRK06460 hypothetical protein; Provisional
Probab=99.61 E-value=2.4e-13 Score=156.18 Aligned_cols=213 Identities=21% Similarity=0.224 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchh-
Q 001990 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (985)
Q Consensus 212 ~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~- 290 (985)
...++++.+|+++|.+. ...+.+|++++.++++++ .. +||+||++...++.....+...++..|++++.++.++
T Consensus 46 ~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al-~~--~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~ 120 (376)
T PRK06460 46 TVLELTKKIVELENAEM--GVAFSSGMGAISTTALAL-LK--PGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD 120 (376)
T ss_pred cHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH
Confidence 34567889999999876 456778887777666654 23 8899999988886666666555677899999887642
Q ss_pred --hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001990 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (985)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~ 365 (985)
+++ +++++++|++.+| |++|.+.|+++|+++||++|++++|| +..+.+....+.++|+||++.|. |+|++ .
T Consensus 121 ~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD-ea~~~~~~~~~l~~~~divv~S~sK~l~G---~ 196 (376)
T PRK06460 121 NIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD-ATFSTPINQKPLELGADIVVHSASKFLAG---H 196 (376)
T ss_pred HHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCcCccccCChhhcCCCEEEeecceeccC---C
Confidence 334 5678999999998 78999999999999999999999995 34444433345568999999998 87752 2
Q ss_pred CCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHH
Q 001990 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (985)
Q Consensus 366 GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (985)
|+.-.|+++.++++.+++.- .++.. +++. ++. ..|+...+.+-++.
T Consensus 197 ~~~~~G~~~~~~~l~~~l~~-------------------------~~~~~---g~~~-~~~-----~a~~~l~~~~~l~~ 242 (376)
T PRK06460 197 NDVIAGLAAGYGKLLNVIDQ-------------------------MRRTL---GTSL-DPH-----AAYLTLRGIKTLKI 242 (376)
T ss_pred CCceEEEEecCHHHHHHHHH-------------------------HHHhc---CCCC-CHH-----HHHHHHhchhhHHH
Confidence 22336888888776655410 00111 1111 121 12334455566778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCE
Q 001990 446 IAQRVHGLAGTFALGLKKLGTV 467 (985)
Q Consensus 446 i~~~~~~~a~~l~~~L~~~g~~ 467 (985)
..+++.+++.++++.|++.+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 8889999999999999987534
No 395
>PRK08363 alanine aminotransferase; Validated
Probab=99.61 E-value=1.7e-13 Score=159.18 Aligned_cols=306 Identities=13% Similarity=0.051 Sum_probs=175.2
Q ss_pred hcHHHHHHHHHHHHHHHhC--CCccceec-ChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITG--FDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G--~~~~~~~~-~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+.+| .+..++.. +++++|...+ ++.+. .+++.|+++.+.|..+...++..|.++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~---~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 141 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLI---FGALL-----DPGDEILIPGPSYPPYTGLVKFYGGVP 141 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH---HHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCEE
Confidence 4655544444444444445 33444444 4444444332 22221 467899999988877777778889988
Q ss_pred EEE-eCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC-CC
Q 001990 705 VSV-GTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 777 (985)
Q Consensus 705 ~~v-~~~~~-g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g-~~ 777 (985)
+.+ +.+++ +.+|+++++++++ +++++|++++| |++|.+. .++++|+++|+++|+++++|+++..-. .+ ..
T Consensus 142 v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~ 218 (398)
T PRK08363 142 VEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV 218 (398)
T ss_pred EEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc
Confidence 888 45444 4689999999886 68899999998 5799886 148999999999999999999874211 01 00
Q ss_pred CCCcC-CC--cEEEeCCcccccccCCCCCCcceeeee--cccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 778 SPGYI-GA--DVCHLNLHKTFCIPHGGGGPGMGPIGV--KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 778 ~~g~~-g~--Di~~~s~hKtl~~p~g~GGPg~G~l~~--~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
....+ +. -+++.|++|+|+. .|.++|++++ ++++.+.+....... . .. ..+.+..++
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~~~~~~~~~~~~~l~~~~~~~-~--------~~--~~~~s~~~q--- 280 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYFA----TGWRLGYIYFVDPEGKLAEVREAIDKL-A--------RI--RLCPNTPAQ--- 280 (398)
T ss_pred CHHHcCcCCcEEEEecchhccCC----ccceEEEEEEeCcHHHHHHHHHHHHHH-h--------cc--cccCChHHH---
Confidence 00111 11 2456788888754 4788999997 444333221100000 0 00 011111111
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHH-HHHHHCC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMDYG 931 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~-~~L~e~G 931 (985)
.++..++.. ..+-+.+..++..++.+++.+.|++...+.+..+.+.++ +.+.++.. ...+..+++ +.|.++|
T Consensus 281 -~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~--~~~~l~~~---~~~~~~~~~~~~l~~~g 353 (398)
T PRK08363 281 -FAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFY--IFPRIEEG---PWKDDKEFVLDVLHEAH 353 (398)
T ss_pred -HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEE--EEEEeccC---CCCCHHHHHHHHHHhCC
Confidence 112222321 234455555666777888888887621222222222221 22244310 012344554 5567889
Q ss_pred CccCC-CCCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 932 FHGPT-MSWP--VPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 932 i~~~~-~~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
|.+.. ..|. .++++|+++. .++++++ ..++.|++++++
T Consensus 354 V~v~~g~~f~~~~~~~iRis~~--~~~~~l~---~~l~~l~~~~~~ 394 (398)
T PRK08363 354 VLFVHGSGFGEYGAGHFRLVFL--PPVEILE---EAMDRFEEFMRE 394 (398)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHH---HHHHHHHHHHHH
Confidence 98643 2232 2478999985 5678888 888888877654
No 396
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.61 E-value=8.6e-14 Score=161.22 Aligned_cols=211 Identities=18% Similarity=0.180 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.+ +.+++|+.+...++.++ . .++++||++...|+.... .+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g~~~~-i~~~sG~~Al~~~l~~l---l-----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEGGEAA-VALASGMGAITATLWTL---L-----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHH---c-----CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 56789999999998764 56677877654333322 1 467899998877764322 24568999999887
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++|+++|+++++|+++..+.. ..|..+++|+++
T Consensus 138 ~-----d~~~l~~~i~---~~tklV~le~p~NPtG~~~-di~~I~~la~~~gi~lIvD~a~a~~~~--~~~l~~g~Di~v 206 (403)
T PRK07503 138 T-----DPAALKAAIS---DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAGAKVVVDNTYCTPYL--QRPLELGADLVV 206 (403)
T ss_pred C-----CHHHHHHhcC---ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccccc--CCchhhCCCEEE
Confidence 4 8999999997 78999999998 5799998 899999999999999999999864322 344467899999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|++|+|+.+ |+..+|+++.++++...+... +. + ..++ .+. ++ ..||..+ -+-+-+
T Consensus 207 ~S~tK~l~g~---gd~~gG~v~~~~~l~~~l~~~--~~--------~-~~~g-~~~----s~---~~a~l~l--~~L~tl 262 (403)
T PRK07503 207 HSATKYLGGH---GDITAGLVVGGKALADRIRLE--GL--------K-DMTG-AVM----SP---FDAFLLM--RGLKTL 262 (403)
T ss_pred ccccccccCC---CceeEEEEEcCHHHHHHHHhh--hH--------H-hCcC-CCC----CH---HHHHHHH--cCcchH
Confidence 9999999521 223478888777665544210 00 0 0011 111 11 1123222 233445
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 001990 869 TEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~ 888 (985)
..+.++..+++..+.+.|++
T Consensus 263 ~~r~~~~~~na~~~a~~L~~ 282 (403)
T PRK07503 263 ALRMDRHCASAQAVAEWLAR 282 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 55566777888999999986
No 397
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.61 E-value=2.5e-13 Score=159.47 Aligned_cols=330 Identities=14% Similarity=0.210 Sum_probs=193.9
Q ss_pred ccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCc----cceecChHHHHHHHHHHH
Q 001990 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMV 667 (985)
Q Consensus 592 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~----~~~~~~sGa~g~~a~l~a 667 (985)
..+|+|.+.+......+......+.+.. +. .+...++.+.|+++++... ..++.+||++++++++..
T Consensus 70 ~~lGH~~p~v~~Ai~~q~~~~~~~~~~~-~~--------~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~Alkl 140 (459)
T PRK06931 70 LALGHNHPDVLQSIQDVLTSGLPLHTLD-LT--------TPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKL 140 (459)
T ss_pred ccCCCCCHHHHHHHHHHHhhhccccccc-cC--------CHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHH
Confidence 4578887766655444322111111100 10 1234578888888875321 235568999999999998
Q ss_pred HHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC------------cEEEEEeCCCCC--------CCCHHHH----HH
Q 001990 668 IRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------------MKIVSVGTDAKG--------NINIEEL----RK 722 (985)
Q Consensus 668 ir~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G------------~~v~~v~~~~~g--------~iDle~L----~~ 722 (985)
+|.| ++|++||. ...+||....+....| ..+..+|..... .-+.+.+ ++
T Consensus 141 Ar~~------tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 141 AKTY------TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHh------cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 8876 34566774 6689998876653221 123344432111 1123333 33
Q ss_pred HHHh---cCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC--------CCcEE
Q 001990 723 AAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVC 787 (985)
Q Consensus 723 ~i~~---~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~ 787 (985)
.+++ ..+++++|+++-. ...|++.+ -++++.++|++||+++|+|+++ .|+.+.|++ -+|++
T Consensus 215 ~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~----tGfGRtG~~~a~~~~gv~PDiv 290 (459)
T PRK06931 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQ----AGFARTGKMFAFEHAGIEPDII 290 (459)
T ss_pred HHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch----hcCCcCchHHHhhhcCCCCCEE
Confidence 3331 2246888888642 34566653 2999999999999999999886 344444432 37998
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
++ .|.+ ++|-| +|.+..++++ +.+.... ..+++.|+++.++++.+.|..+.+++
T Consensus 291 t~--gK~l----~gG~P-i~av~~~~~~-~~~~~~~------------------~~~T~~gnpla~aaala~L~~l~~~~ 344 (459)
T PRK06931 291 VM--SKAV----GGGLP-LAVLGIKKEF-DAWQPGG------------------HTGTFRGNQLAMATGLTTLKILKEEN 344 (459)
T ss_pred Ee--cccc----cCCcc-eeeeeeHHHH-hhccCCC------------------CCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 76 3766 44445 5566666654 3221100 01234457777888888898887766
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCcccc------CC---CCHHHHHHHHHHCCCc
Q 001990 868 LTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT------AG---IEPEDVAKRLMDYGFH 933 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~------~g---~~~~~l~~~L~e~Gi~ 933 (985)
+. ++..+..++|+++|++. ++++ ..|. +. + +-+.+..-+.. .. .-...+.+.|.++|++
T Consensus 345 l~---~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl-m--~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 417 (459)
T PRK06931 345 LA---QNAAERGEWLKAQLAELQKRYPCIGNVRGR-GL-M--IGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLL 417 (459)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHhCCCeEeEecC-ce-E--EEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcE
Confidence 44 45566777888888652 2221 1121 11 1 12222100000 00 0124577788899998
Q ss_pred cCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 934 GPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 934 ~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
+.... ...+.+|+.|+..+|++||| .++++|.+++.++.+
T Consensus 418 ~~~~~-~~~~~l~~~Ppl~it~~eid---~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 418 LERGG-RNGNVVRLLPPLLITQAECE---EFIDRFEQALLAAVK 457 (459)
T ss_pred EeecC-CCCCEEEEECCCCcCHHHHH---HHHHHHHHHHHHHHh
Confidence 74321 11478999999999999999 999999999887544
No 398
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=3.2e-13 Score=156.95 Aligned_cols=144 Identities=15% Similarity=0.160 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.+++|+.|+.+++.++. .++++||++...|+..... +...|++++.++
T Consensus 71 ~~~Le~~lA~l~g~~~a-v~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALEGGVAA-LLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 55789999999998875 566778777655554432 3678999988766543322 345788888885
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+. .|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||++++.+. +..|-++|+|+++
T Consensus 141 d~---~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~-Dl~~I~~la~~~gi~liVD~t~a~~~--~~~pl~~GaDivv 211 (436)
T PRK07812 141 DP---DDLDAWRAAVR---PNTKAFFAETISNPQIDVL-DIPGVAEVAHEAGVPLIVDNTIATPY--LIRPLEHGADIVV 211 (436)
T ss_pred CC---CCHHHHHHhCC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhcCCCEEE
Confidence 22 38999999987 88999999998 5799998 99999999999999999999986433 2456678999999
Q ss_pred eCCccccc
Q 001990 789 LNLHKTFC 796 (985)
Q Consensus 789 ~s~hKtl~ 796 (985)
.|+||+++
T Consensus 212 ~S~tK~lg 219 (436)
T PRK07812 212 HSATKYLG 219 (436)
T ss_pred EecccccC
Confidence 99999995
No 399
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=9e-14 Score=160.55 Aligned_cols=210 Identities=15% Similarity=0.103 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~ 708 (985)
...+++++++++.|.+.+ +.+++|..++..++.++. .++|+||++...|+.... .+...|++++.++
T Consensus 65 ~~~~le~~lA~l~g~~~~-i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 135 (398)
T PRK08249 65 TVQAFEEKVRILEGAEAA-TAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE 135 (398)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC
Confidence 466899999999998765 666777766644433321 367899998886654322 2446799988776
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
. .|+++++++|+ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++.... ...+..+++|++
T Consensus 136 ~-----~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~l~~~~Div 204 (398)
T PRK08249 136 T-----GDHEQIEAEIA---KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVGALVVVDNTFATPI--NQNPLALGADLV 204 (398)
T ss_pred C-----CCHHHHHHhcC---CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCcCccc--cCCchhhCCCEE
Confidence 4 58999999997 78999999998 5799998 89999999999999999999986332 223446789999
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+.|++|+|+.+ |.-.+|+++.++++.+.+.... ...+... ++ ..+|.. .-+.+.
T Consensus 205 v~S~sK~l~g~---~~~~gG~vv~~~~l~~~l~~~~-------------~~~g~~~-----s~---~~a~l~--l~~l~t 258 (398)
T PRK08249 205 IHSATKFLSGH---ADALGGVVCGSKELMEQVYHYR-------------EINGATM-----DP---MSAYLI--LRGMKT 258 (398)
T ss_pred eccCceecCCC---CCceEEEEECCHHHHHHHHHHH-------------HhcCCCC-----CH---HHHHHH--HhCcch
Confidence 99999998521 1112477777766654432100 0001111 11 112322 233445
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+....++..+++..+.+.|++
T Consensus 259 L~~R~~~~~~na~~la~~L~~ 279 (398)
T PRK08249 259 LKLRVRQQQESAMALAKYLQT 279 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 566667788999999999986
No 400
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.61 E-value=3.3e-13 Score=157.07 Aligned_cols=297 Identities=11% Similarity=0.063 Sum_probs=170.8
Q ss_pred HHHHHHHHHhCC------Cccce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEe
Q 001990 636 NLGEWLCTITGF------DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (985)
Q Consensus 636 el~~~la~l~G~------~~~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~ 708 (985)
++++.+++++|. +...+ .++++++|.. ++++.+. .++++|+++++.|..+...++..|++++.++
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~ 148 (403)
T TIGR01265 77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIE---ICIEALA-----NPGANILVPRPGFPLYDTRAAFSGLEVRLYD 148 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHH---HHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEec
Confidence 456666666653 23334 4454555443 3333321 3678899998877666666778999999998
Q ss_pred CCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cC--CCCCC
Q 001990 709 TDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPG 780 (985)
Q Consensus 709 ~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g--~~~~g 780 (985)
.+. ++.+|+++++++++ +++++|++++| |++|.+.+ ++++|.++|+++|+++++|+++..-. .+ +....
T Consensus 149 ~~~~~~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 225 (403)
T TIGR01265 149 LLPEKDWEIDLDGLEALAD---EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMA 225 (403)
T ss_pred CCcccCCccCHHHHHHHhC---cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchh
Confidence 753 46799999999887 78899999998 57998851 48999999999999999999874211 11 00111
Q ss_pred cCC--Cc-EEEeCCcccccccCCCCCCcceeeeecc--c-----ccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 781 YIG--AD-VCHLNLHKTFCIPHGGGGPGMGPIGVKK--H-----LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 781 ~~g--~D-i~~~s~hKtl~~p~g~GGPg~G~l~~~~--~-----l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
.+. .. +++.|+.|+|+.| |.++|++++.. . +...+.... . .+...+ ...+
T Consensus 226 ~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~--~~~q- 285 (403)
T TIGR01265 226 SFASIVPVLSLGGISKRWVVP----GWRLGWIIIHDPHGIFRDTVLQGLKNLL------------Q-RILGPA--TIVQ- 285 (403)
T ss_pred hhccCCcEEEEeecccccCCC----cceEEEEEEeCchhhhHHHHHHHHHHHh------------h-hhcCCC--hHHH-
Confidence 111 12 4567778887544 67899998742 2 121111000 0 000111 0111
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHH-HH
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MD 929 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L-~e 929 (985)
.++..++....+.-+.+..++..++.+++.+.|+....+.+..+.+.. -+.++++.-......+..++++.| .+
T Consensus 286 ---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~--f~~~~~~~~~~~~~~~~~~~~~~l~~~ 360 (403)
T TIGR01265 286 ---GALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAM--YLMVKLELELFPEIKDDVDFCEKLVRE 360 (403)
T ss_pred ---HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcee--EEEEeccccccCCCCCHHHHHHHHHHh
Confidence 111223322112224445556677778888888762122222222222 133444310000012567888886 57
Q ss_pred CCCccCCC-CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 930 YGFHGPTM-SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 930 ~Gi~~~~~-~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+||.+... .|..++.+|++++. .++.++ +.++.|.++++
T Consensus 361 ~gv~v~pg~~f~~~~~iRis~~~--~~~~l~---~~l~~l~~~~~ 400 (403)
T TIGR01265 361 ESVICLPGSAFGLPNWVRITITV--PESMLE---EACSRIKEFCE 400 (403)
T ss_pred CCEEEeCccccCCCCeEEEEecC--CHHHHH---HHHHHHHHHHH
Confidence 79986432 23236899999873 466676 77777766654
No 401
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=1.9e-13 Score=158.12 Aligned_cols=210 Identities=18% Similarity=0.187 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCc----HHHHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN----PATAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~----~~~~~~~G~~v~~v~ 708 (985)
...++++.++++.|.+.. +.+++|+.+...++ +.+. .++|+||++...|+.. ...+...|++++.++
T Consensus 61 ~~~~Le~~lA~l~g~~~~-v~~~sG~~Ai~~~l---~all-----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~ 131 (405)
T PRK08776 61 TRDLLGEALAELEGGAGG-VITATGMGAINLVL---NALL-----QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITAD 131 (405)
T ss_pred HHHHHHHHHHHHhCCCce-EEEcCHHHHHHHHH---HHHh-----CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEEC
Confidence 356788999999998654 66667766553333 3221 4678999987655432 222445688888887
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
. .|+++++++++ ++|++|++++| |++|.+. |+++|+++|+++|+++++|+++..+ ....|..+|+|++
T Consensus 132 ~-----~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~-dl~~I~~la~~~gi~vIvD~a~a~~--~~~~pl~~gaDiv 200 (405)
T PRK08776 132 L-----TDPRSLADALA---QSPKLVLIETPSNPLLRIT-DLRFVIEAAHKVGALTVVDNTFLSP--ALQKPLEFGADLV 200 (405)
T ss_pred C-----CCHHHHHHhcC---cCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCCccc--ccCCcccccCCEE
Confidence 5 38999999997 78999999999 6899997 8999999999999999999998543 2335667899999
Q ss_pred EeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++|+||+|+.+ |+-.+|+++++ +++.+.+.... ...+ .+.++ ..+|..+ .|.+
T Consensus 201 v~S~tK~l~g~---~~~~~G~vv~~~~~l~~~l~~~~-------------~~~g-~~~s~-------~~a~l~~--~gl~ 254 (405)
T PRK08776 201 LHSTTKYINGH---SDVVGGAVVARDAELHQQLVWWA-------------NALG-LTGSP-------FDAFLTL--RGLR 254 (405)
T ss_pred EecCceeecCC---CCceEEEEEeCCHHHHHHHHHHH-------------HhcC-CCCCH-------HHHHHHH--hhhC
Confidence 99999999522 11225666664 44443321000 0000 11111 1123333 3344
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001990 867 GLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.+..+.++..+++..+.+.|++
T Consensus 255 tl~~r~~~~~~na~~la~~L~~ 276 (405)
T PRK08776 255 TLDARLRVHQENADAIAALLDG 276 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHc
Confidence 5666777888999999999986
No 402
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=5.1e-14 Score=162.49 Aligned_cols=209 Identities=18% Similarity=0.077 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.++||+.|+..++.++. +++|+||+++..|+.+.. .+...|++++.++.
T Consensus 67 ~~~Le~~lA~l~g~~~~-l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 67 SLALAQRLAEIEGGRHA-LLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHHHhCCCeE-EEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 56889999999998754 556777777655544431 478999999988876542 34678999998875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
. |.++++++++ ++|++|++++| |++|... |+++|+++||++|+++++|+++..+. +..|...|+|+++
T Consensus 138 ~-----~~~~l~~~i~---~~tklV~le~p~Np~~~~~-di~~I~~ia~~~gi~livD~a~a~~~--~~~~l~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVP-DVPAITAAARARGVVTAIDNTYSAGL--AFKPFEHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCccHh-hHHHHHHHHHHcCCEEEEECCccccc--ccCHHHcCCeEEE
Confidence 3 5678999887 88999999998 5788887 89999999999999999999986433 3456678999999
Q ss_pred eCCcccccccCCCCCCcceeeee-cccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~-~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|++|+++. .++..+|.+++ ++++.+.+... + ..++. +. ....+|. ...|-+.
T Consensus 207 ~S~tK~~~g---~~~~~gG~v~~~~~~~~~~~~~~------------~-~~~G~-~~-------~~~~a~l--~lr~l~t 260 (394)
T PRK07050 207 QALTKYQSG---GSDVLMGATITADAELHAKLKLA------------R-MRLGI-GV-------SADDCSL--VLRGLPS 260 (394)
T ss_pred EECCceecC---CCCeeEEEEEECCHHHHHHHHHH------------H-HhcCC-CC-------CHHHHHH--HHcCCCc
Confidence 999999952 12222455555 45554433210 0 00011 10 1112333 3334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+..+.++..+++..+.+.|++
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~ 281 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKA 281 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 666677788888899999886
No 403
>PRK04311 selenocysteine synthase; Provisional
Probab=99.60 E-value=1.3e-13 Score=160.85 Aligned_cols=291 Identities=21% Similarity=0.222 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC----C--cHHHHHhcCcEEEE
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVS 706 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg----~--~~~~~~~~G~~v~~ 706 (985)
.+..+++.+++++|.+.+ +.+++|+.|...++ ..+ .++++||+++..|. + .+..+...|+++++
T Consensus 128 r~~~~e~~lA~l~Gae~a-~vv~sgtaAl~l~l---~~l------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~ 197 (464)
T PRK04311 128 RDRALAALLCALTGAEDA-LVVNNNAAAVLLAL---NAL------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVE 197 (464)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHH---HHh------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEE
Confidence 356789999999999865 55677776553332 221 36788999875443 1 23446678999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CC--ccccc-cCHHHHHHHHHHcCCEEEEEcccccc----cc---C
Q 001990 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-ST--HGVYE-EGIDEICKIIHDNGGQVYMDGANMNA----QV---G 775 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~--~G~i~-~di~eI~~la~~~g~lliVD~a~~~~----~~---g 775 (985)
++.+ +..++++++++|+ ++|++|+++++ |+ .|... .|+++|+++||++|+++++|+++..- .. .
T Consensus 198 v~~~--~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~ 272 (464)
T PRK04311 198 VGTT--NRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD 272 (464)
T ss_pred ECCC--CCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC
Confidence 8763 3568999999998 88999999887 43 45321 38999999999999999999853110 00 0
Q ss_pred ---CCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 776 ---LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 776 ---~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
+..+.++|+|++++|+||+| |||.+|++++++++++.+.....+... +..+ ..+.
T Consensus 273 ~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~r~l-----r~dk-----------~~l~ 330 (464)
T PRK04311 273 EPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLKRAL-----RVDK-----------LTLA 330 (464)
T ss_pred CCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhHHHH-----hcch-----------HHHH
Confidence 01223589999999999998 578899999998887665432111100 0000 0011
Q ss_pred HHHHH--HHHH----Hhchhh---HHHHHHHHHHHHHHHHHHHhcc----C--CeeEc----C--C-CCceeEEEEEEec
Q 001990 853 LPISY--TYIA----MMGSKG---LTEASKIAILNANYMAKRLEKH----Y--PILFR----G--V-NGTVAHEFIVDLR 910 (985)
Q Consensus 853 ~~~A~--a~l~----~lg~~g---l~~~~~~~~~~a~~l~~~L~~~----~--~i~~~----g--~-~~~~~~~~vv~~~ 910 (985)
+..++ .|+. ..+-.+ +....++..++++.+.+.|++. + .+... | . .+.....+.+.++
T Consensus 331 ~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~ 410 (464)
T PRK04311 331 ALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLT 410 (464)
T ss_pred HHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEe
Confidence 11111 1110 011111 1122345566788888888752 1 22211 1 0 0111233455554
Q ss_pred CccccCCCCHHHHHHHHHHCC--CccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 911 GLKNTAGIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 911 ~~~~~~g~~~~~l~~~L~e~G--i~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
. .+.+..++.++|++.. |++. +. .+.+.+-+- ...++|++ .+++.|+++.
T Consensus 411 ~----~~~~~~~l~~~lr~~~~~i~~r-~~---~~~~~ld~r-~~~~~~~~---~~~~~~~~~~ 462 (464)
T PRK04311 411 P----KDRSLEALAARLRLLPPPVIGR-IE---DGRLLLDLR-TLEEEDEE---RLAAALLEAL 462 (464)
T ss_pred C----CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeC-cCCHHHHH---HHHHHHHHHh
Confidence 1 2467889999998743 3321 11 355555542 34677888 8888888764
No 404
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.60 E-value=1.3e-13 Score=158.69 Aligned_cols=307 Identities=14% Similarity=0.071 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~ 712 (985)
...++++++++.+|.+.+ +.+++|++|...++.++ +.+++++||++...|..+...+...|++++.++++++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~al~~~l~~~-------~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~ 103 (375)
T PRK11706 32 FTRRCQQWLEQRFGSAKV-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (375)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHh-------CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 456788889999998754 55677776653332222 1246789999998777666677889999999999876
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCC-CCCcCCCcEEEeC
Q 001990 713 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGADVCHLN 790 (985)
Q Consensus 713 -g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~-~~g~~g~Di~~~s 790 (985)
+.+|+++++++++ +++++|++++ .+|... |+++|.++|+++|+++++|++|+.+...-. ..+.+ .|+.++|
T Consensus 104 ~~~~d~~~le~~i~---~~tk~i~~~~--~~G~~~-~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~-~~~~~~S 176 (375)
T PRK11706 104 TMNIDETLIEAAIT---PKTRAIVPVH--YAGVAC-EMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTI-GHIGCFS 176 (375)
T ss_pred cCCcCHHHHHHhcC---CCCeEEEEeC--CCCCcc-CHHHHHHHHHHcCCEEEEECccccccccCCeeeecC-cCEEEEe
Confidence 4799999999997 6899998876 468876 899999999999999999999965431111 12333 4888899
Q ss_pred Cc--ccccccCCCCCCcceeeeecccccCcCCCC-ccccCCCCCCCC--CCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 791 LH--KTFCIPHGGGGPGMGPIGVKKHLAPFLPSH-PVVSTGGIPAPE--KSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 791 ~h--Ktl~~p~g~GGPg~G~l~~~~~l~~~lpg~-~~g~~~~~~~~~--~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
+| |.++. |-|++++..++++.+.+... ..|...+..... .......+..++.-+...++...+.+.
T Consensus 177 f~~~K~l~~-----g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~---- 247 (375)
T PRK11706 177 FHETKNYTA-----GEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLE---- 247 (375)
T ss_pred CCCCccccc-----cCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHH----
Confidence 88 87742 22344554445554322100 001000000000 000000000110001111111122222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC--C-eeEc-CCCC--ceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC--
Q 001990 866 KGLTEASKIAILNANYMAKRLEKHY--P-ILFR-GVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-- 937 (985)
Q Consensus 866 ~gl~~~~~~~~~~a~~l~~~L~~~~--~-i~~~-g~~~--~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-- 937 (985)
.+.+..++..++++++.+.|.+.. . +.++ .+.+ ...+.+.+.+. .+.+..++.+.|.++||.+...
T Consensus 248 -~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~l~~~L~~~gI~~~~~~~ 321 (375)
T PRK11706 248 -AADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR-----DLEDRSALINFLKEAGIMAVFHYI 321 (375)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC-----CcCCHHHHHHHHHHCCCCccccCC
Confidence 244444555566777777776521 1 2211 1111 12223344443 1346789999999999985311
Q ss_pred --C--------------CC-----CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 938 --S--------------WP-----VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 938 --~--------------~p-----v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
. +| ....|.+-++...|++|++ +.+++|+++.
T Consensus 322 p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~---~i~~~i~~~~ 374 (375)
T PRK11706 322 PLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQR---TVIDTILEFF 374 (375)
T ss_pred ccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHH---HHHHHHHHHh
Confidence 1 11 0133555556668899999 9999988753
No 405
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=1.8e-13 Score=157.49 Aligned_cols=282 Identities=15% Similarity=0.156 Sum_probs=176.3
Q ss_pred HHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCCC
Q 001990 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (985)
Q Consensus 636 el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~i 715 (985)
++++.+++++|.+...+.+++|++. +..++++.+. .++++|+++.+.|+.+...++..|++++.++.++++.+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSED--LIAVICRAVL-----RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 5788899999987766666666542 2222233221 46788999887665555667889999999999878899
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEccccccccCCCCCC------cCCC-c
Q 001990 716 NIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG------YIGA-D 785 (985)
Q Consensus 716 Dle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~~g~~~~g------~~g~-D 785 (985)
|+++++++++ +++++|++++| |++|.+. +.+++.++++. .++++++|+++..-..+-..+. ..+. -
T Consensus 148 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 148 DLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred CHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 9999999997 67788999999 5799987 66666666653 4889999998742111100010 1111 2
Q ss_pred EEEeCCcccccccCCCCCCcceeeee-cccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~-~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
+++.|+.|+|+ ..|.++|++++ ++++.+.+.. . ....++++ ..+ .++.+.+. .
T Consensus 224 i~i~SfSK~~~----l~GlRiG~~i~~~~~l~~~~~~-~-------------~~~~~~~~--~~q----~~~~~~l~--~ 277 (371)
T PRK05166 224 IVLRTFSKAYG----LAGLRVGYGLVSDPELVGLLDR-V-------------RTPFNVNG--AAQ----AAALAALD--D 277 (371)
T ss_pred EEEeechHhhh----cchhheeeeecCCHHHHHHHHH-h-------------ccCCCCCH--HHH----HHHHHHhc--C
Confidence 56677777775 45789999776 4555443321 0 00011111 111 11122221 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CCCC
Q 001990 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVP 942 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~pv~ 942 (985)
.+-+++..+...++.+++.+.|++ ++.+ ..+++. + +.++++ .+..++.+.|.++||.+.... +...
T Consensus 278 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~--~p~~g~-f--l~~~~~-------~~~~~l~~~l~~~gi~v~p~~~~~~~ 345 (371)
T PRK05166 278 EEHLAKGVALALAERERLKKELAEMGYRI--APSRAN-F--LFFDAR-------RPASAVAEALLRQGVIVKPWKQPGFE 345 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCee--CCCcCC-E--EEEeCC-------CCHHHHHHHHHHCCeEEecCCCCCCC
Confidence 223444445566677888888887 4432 222222 2 334432 356789999999999875432 2235
Q ss_pred CEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 943 GTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 943 ~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
+.+|++++ +.++.+ +|+++|+.+.
T Consensus 346 ~~iRi~~~---~~~~~~---~l~~~l~~i~ 369 (371)
T PRK05166 346 TFIRVSIG---SPEEND---HFVAALDKVL 369 (371)
T ss_pred CeEEEEcC---CHHHHH---HHHHHHHHHh
Confidence 88999985 677888 9999998764
No 406
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=2.6e-13 Score=158.24 Aligned_cols=294 Identities=15% Similarity=0.199 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc--------
Q 001990 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~-------- 702 (985)
..++.+.|++++... ...++.+||+++++++++.+|.| +++.+||. ...+||....++...|.
T Consensus 85 ~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~ 158 (421)
T PRK06777 85 YVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAY------TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGF 158 (421)
T ss_pred HHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCC
Confidence 346778888887532 23467789999999999988876 24556664 66899988766543331
Q ss_pred -----EEEEEeCCCC--C---CCCHHHHHHHHHh--cCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEE
Q 001990 703 -----KIVSVGTDAK--G---NINIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMD 766 (985)
Q Consensus 703 -----~v~~v~~~~~--g---~iDle~L~~~i~~--~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD 766 (985)
.+..++.... + ..|++++++.+++ +.+++++|+++-. +..|+..+ .+++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK06777 159 GPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIAD 238 (421)
T ss_pred CCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1122222211 1 1246778888863 3467888877642 45665432 3999999999999999999
Q ss_pred ccccccccCCCC---CCcC--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCC
Q 001990 767 GANMNAQVGLTS---PGYI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (985)
Q Consensus 767 ~a~~~~~~g~~~---~g~~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~ 841 (985)
+++. +++-... ...+ .+|++++ .|.+ + ||..+|++++++++.+.+..... ..
T Consensus 239 Ev~t-g~gr~g~~~~~~~~~~~pDiv~~--sK~l----~-~G~pigav~~~~~i~~~~~~~~~--------------~~- 295 (421)
T PRK06777 239 EVQT-GFARTGKLFAMEYYDVKPDLITM--AKSL----G-GGMPISAVVGRAEVMDAPAPGGL--------------GG- 295 (421)
T ss_pred chhh-CCccCCchhhhhhcCCCCCEEee--ehhh----c-CCCceEEEEEcHHHHhccCCCCC--------------CC-
Confidence 9874 2211111 1112 2687753 4666 4 45678899999887765532110 01
Q ss_pred cccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccccC
Q 001990 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTA 916 (985)
Q Consensus 842 i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~~ 916 (985)
++.|++..++++.+.|..+..+. ..++..++.++|+++|++. .+.+ ..+. +.. +.+.+.. + ..
T Consensus 296 ---T~~~~p~~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G~~---~~i~~~~-~-~~ 363 (421)
T PRK06777 296 ---TYAGNPLAVAAALAVLDVIAEEK---LCQRALILGAHLVEVLEKAKASCPAIVDIRAR-GSM---VAVEFND-P-QT 363 (421)
T ss_pred ---CCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCc-eEE---EEEEEec-C-cc
Confidence 12234555666777777665543 4456667788888888762 2221 1121 222 2222221 0 01
Q ss_pred CCC----HHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 917 GIE----PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 917 g~~----~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
+.+ ...+.+.|.++|+.+.... ...+.+|++|....|++++| ++++.|.+.+
T Consensus 364 ~~~~~~~~~~l~~~~~~~Gv~i~~~~-~~g~~lr~~ppl~i~~~~i~---~~~~~l~~~l 419 (421)
T PRK06777 364 GKPSPEFTRQYQRQALEEGLLLLSCG-VHGNVIRFLYPLTIPDAQFS---KALNILTRLL 419 (421)
T ss_pred CCccHHHHHHHHHHHHhCCeEEeecC-CCCCEEEEeCCCCCCHHHHH---HHHHHHHHHH
Confidence 111 2345666788999874321 11368999999999999999 9999888765
No 407
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.60 E-value=2.1e-13 Score=158.22 Aligned_cols=292 Identities=12% Similarity=0.071 Sum_probs=175.6
Q ss_pred hhcHHHHHHHHHHHHHHHhCC----Ccc-ceecChHHH-HHHHHHHHHHHHHHhcCCCCCC--EEEEcCCCCCCcHHHHH
Q 001990 627 AQGYQEMFNNLGEWLCTITGF----DSF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRN--VCIIPVSAHGTNPATAA 698 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~----~~~-~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~--~Vlv~~~~Hg~~~~~~~ 698 (985)
.+|..++.+.+.+++.+.+|. +.. .+..++|++ +.. ++++.+. .+++ .|+++.+.+..+...++
T Consensus 63 ~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~---~~~~~l~-----~~gd~~~vlv~~P~y~~~~~~~~ 134 (393)
T TIGR03538 63 TKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALF---AFAQAVI-----NPGQAPLVVMPNPFYQIYEGAAL 134 (393)
T ss_pred CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHH---HHHHHHc-----CCCCcceEEecCCCCcchHHHHH
Confidence 357666666666666666554 333 455555544 332 2333321 3455 48899887777777788
Q ss_pred hcCcEEEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc
Q 001990 699 MCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 699 ~~G~~v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
..|++++.+|.+++ ..+|++++++++. +++++|++++| |++|.+-+ .+++|+++|+++|+++++|+++..-.
T Consensus 135 ~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~ 211 (393)
T TIGR03538 135 LAGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELY 211 (393)
T ss_pred hcCCeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcc
Confidence 89999999998644 4689999999887 67899999999 57998862 38999999999999999999874211
Q ss_pred cC--CCCC------CcCCC-----cEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCC
Q 001990 774 VG--LTSP------GYIGA-----DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (985)
Q Consensus 774 ~g--~~~~------g~~g~-----Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~ 840 (985)
.. ...+ ...+. -+++.|+.|.|+. .|.++|+++++++++..+.... ...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~----~GlRvG~~i~~~~l~~~~~~~~--------------~~~ 273 (393)
T TIGR03538 212 FDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL----PGLRSGFVAGDAEILKAFLRYR--------------TYH 273 (393)
T ss_pred cCCCCCCcCHHHhcccccccccccEEEEecchhhcCC----cccceEEEecCHHHHHHHHHHH--------------Hhh
Confidence 10 0000 01111 1667777887744 4789999998877654432100 000
Q ss_pred CcccccchhhhHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCC
Q 001990 841 TIAAAPWGSALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIE 919 (985)
Q Consensus 841 ~i~s~~~g~~~~~~~A~a~l~~lg-~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~ 919 (985)
..+.+...+ .++ +..+. .+-+++..+...++.+.+.+.|++.+.+. .+.+.. .+.++++ .+
T Consensus 274 ~~~~~~~~q----~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~p~gg~--f~~~~~~-------~~ 335 (393)
T TIGR03538 274 GCAMPIPTQ----LAS---IAAWNDEQHVRENRALYREKFAAVLEILGQVLDLE--LPDAGF--YLWPKVP-------GD 335 (393)
T ss_pred ccCcCHHHH----HHH---HHHhcChHHHHHHHHHHHHHHHHHHHHHHhhCccc--CCCeeE--EEEEECC-------CC
Confidence 011110111 111 12222 23344445555667777888887643322 121222 2334442 24
Q ss_pred HHHHHHHHH-HCCCccCCC-CC--------CCCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 920 PEDVAKRLM-DYGFHGPTM-SW--------PVPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 920 ~~~l~~~L~-e~Gi~~~~~-~~--------pv~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
..++++.|. ++||.+... .| +..+.+||+++. ++++++ ..++.|++
T Consensus 336 ~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~---~~l~~l~~ 391 (393)
T TIGR03538 336 DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECV---EAAERIRS 391 (393)
T ss_pred HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHH---HHHHHHHH
Confidence 677888875 579986321 11 124789999864 577777 77777654
No 408
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.60 E-value=1.4e-13 Score=158.76 Aligned_cols=209 Identities=19% Similarity=0.221 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~ 708 (985)
...++++.+++++|.+.+ +.+++|+.++.++++++. .++++||++...|+.... .+...|++++.++
T Consensus 62 ~~~~le~~la~l~g~~~~-v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 62 TVTMFQERLAALEGAEAC-VATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 366899999999998764 556777776654444332 367899998887765433 2456899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
.+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...|..+|+|++
T Consensus 133 ~~-----d~~~l~~~i~---~~tklV~ie~p~NptG~v~-dl~~I~~la~~~gi~livD~t~~~~~--~~~pl~~g~Div 201 (390)
T PRK08133 133 LT-----DLDAWRAAVR---PNTKLFFLETPSNPLTELA-DIAALAEIAHAAGALLVVDNCFCTPA--LQQPLKLGADVV 201 (390)
T ss_pred CC-----CHHHHHHhcC---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhhCCcEE
Confidence 74 8999999997 78999999998 5799998 89999999999999999999875332 234557789999
Q ss_pred EeCCcccccccCCCCCCc-ceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPG-MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg-~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+.|+||+++. .|.. +|+++.+++++..+.... + ..+...+ + ..+|..+ .|.+
T Consensus 202 v~S~sK~~~g----~g~~~GG~vv~~~~~~~~~~~~~-----------~--~~g~~~~-----~---~~a~~~l--~gl~ 254 (390)
T PRK08133 202 IHSATKYLDG----QGRVLGGAVVGSKELMEEVFGFL-----------R--TAGPTLS-----P---FNAWVFL--KGLE 254 (390)
T ss_pred EeecceeecC----CcceEeEEEEcCHHHHHHHHHHH-----------H--HhCCCCC-----H---HHHHHHH--cccc
Confidence 9999999852 2332 367777765443221000 0 0011111 1 1233333 3445
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001990 867 GLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.+..+.++..+++..+.+.|++
T Consensus 255 tl~~R~~~~~~~a~~la~~L~~ 276 (390)
T PRK08133 255 TLSLRMEAHSANALALAEWLEA 276 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 5677777788899999999986
No 409
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.60 E-value=1.8e-13 Score=158.24 Aligned_cols=209 Identities=17% Similarity=0.160 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCc-H---HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-P---ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~-~---~~~~~~G~~v~~v~~ 709 (985)
..++++.+|++.|.+.+ +.+++|..++.+++.++. .++++||++...|+.. . ..++..|++++.++.
T Consensus 72 ~~~le~~lA~l~g~~~a-l~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEGAEAC-FATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 56899999999998754 667778776655444332 4678999988766543 2 224568999999975
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||+++..+. ...+..+|+|+++
T Consensus 143 ~-----d~~~l~~ai~---~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g~~vivD~a~a~~~--~~~~~~~gaDivv 211 (403)
T PRK07810 143 E-----DLSQWEEALS---VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAGAKVVLDNVFATPL--LQRGLPLGADVVV 211 (403)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCCccc--cCChhhcCCcEEE
Confidence 3 8999999997 78999999999 5799887 89999999999999999999985432 2345577999999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccC-cCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~-~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+|++|+|+.+ |..-+|+++++++... .+.... + .++...+ + ..||..+ .+-+-
T Consensus 212 ~S~tK~l~g~---g~~~gG~v~~~~~~~~~~l~~~~-----------~--~~g~~~s-----~---~~a~l~l--~~L~t 265 (403)
T PRK07810 212 YSGTKHIDGQ---GRVLGGAILGDREYIDGPVQKLM-----------R--HTGPALS-----A---FNAWVLL--KGLET 265 (403)
T ss_pred ccCCceecCC---cCceeEEEEeChHHHHHHHHHHH-----------H--HhCCCCC-----H---HHHHHHH--hccCc
Confidence 9999999521 1112578887765432 111000 0 0011111 1 1233333 33455
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+..+.++..+++.++.+.|++
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~ 286 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEG 286 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 667778888999999999986
No 410
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.60 E-value=3.2e-13 Score=155.29 Aligned_cols=212 Identities=18% Similarity=0.163 Sum_probs=151.3
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|++.|.+ ++.++.|+++++.++++++ .. +||+|+++...|+++...+..++...++++..++. ++
T Consensus 54 ~~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~al-l~--~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 54 DLLQQALAELEGGA--GAVVTNTGMSAIHLVTTAL-LG--PDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-cC--CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 34678999999964 5889999999988887775 33 88999999999998888887766667788888754 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
+++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |+++++. +
T Consensus 129 l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~---~ 204 (382)
T TIGR02080 129 LRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 204 (382)
T ss_pred HHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeecceeccCCC---C
Confidence 666 7788999999998 68999999999999999999999995 45555555566678999999998 8775331 1
Q ss_pred CceEEEEEc-hhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~-~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
--.|++.++ +++.+++- ..+...| +|. +++ . .|+...|.+-+..+
T Consensus 205 ~~~G~i~~~~~~~~~~l~-------------------------~~~~~~g---~~~-sp~---~--a~l~lr~l~tl~~R 250 (382)
T TIGR02080 205 VIAGAVIAKDPQVAEELA-------------------------WWANNLG---VTG-GAF---D--SYLTLRGLRTLVAR 250 (382)
T ss_pred ceeEEEEeCCHHHHHHHH-------------------------HHHHccC---CCC-CHH---H--HHHHHcccchHHHH
Confidence 125676664 44443330 0000101 111 222 1 12344555566666
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
.+++.+++..+.++|++.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7788899999999999875454
No 411
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.60 E-value=6.5e-13 Score=154.25 Aligned_cols=293 Identities=20% Similarity=0.221 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcEEEE---Ee
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---VG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~v~~---v~ 708 (985)
...+++++++++.|.+. .++.++|++++++++.+++.+....+. .+++|++ ...+||.........+..... .+
T Consensus 82 ~~~~la~~l~~~~~~~~-v~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 82 PQEELAEKLVELSGMDK-VFFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred HHHHHHHHHHhhcCCCE-EEECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 46678899999888764 467789999888888877765321111 2256665 456787766554443322111 11
Q ss_pred CCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEEcccccccc--CC-C
Q 001990 709 TDAKG----NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQV--GL-T 777 (985)
Q Consensus 709 ~~~~g----~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~---~di~eI~~la~~~g~lliVD~a~~~~~~--g~-~ 777 (985)
...+. ..|+++++++++ +++++|+++.+ +.+|... ..+++|.++|+++|+++++|+++. +++ +. .
T Consensus 160 ~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~ 235 (396)
T PRK02627 160 LVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLF 235 (396)
T ss_pred CCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCcee
Confidence 11111 228999999996 78999999876 4566432 248999999999999999999874 221 10 0
Q ss_pred CCCcC--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHH
Q 001990 778 SPGYI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 778 ~~g~~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
..... .+|++++ .|.++ +|.++|++++++++.+.+.... + .. +.+ +++..+.+
T Consensus 236 ~~~~~~~~pdi~t~--sK~~~-----~G~rig~~~~~~~~~~~~~~~~---------~---~~--t~~----~~~~~~~a 290 (396)
T PRK02627 236 AYQHYGIEPDIMTL--AKGLG-----GGVPIGAVLAKEKVADVFTPGD---------H---GS--TFG----GNPLACAA 290 (396)
T ss_pred eehhcCCCCCEEEE--cchhh-----CCcccEEEEEcHHHHhccCCCC---------C---CC--CCC----CCHHHHHH
Confidence 01112 3577654 47774 4567899999887765543110 0 01 111 13334445
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCC
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi 932 (985)
+.+.+..+..+++ .++..++.+++++.|.+. ++.....+.... .+.+.+. .+..++.+.|.++|+
T Consensus 291 a~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~--~~~i~~~-------~~~~~~~~~l~~~Gv 358 (396)
T PRK02627 291 ALAVIEIIEEEGL---LENAAEVGEYLRAKLRELLEKYPGIKEVRGLGL--MIGIELD-------RPAAEIVKKALEKGL 358 (396)
T ss_pred HHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcE--EEEEEec-------CcHHHHHHHHHHCCe
Confidence 5566665544333 345556666777766542 221111000011 1233332 356789999999999
Q ss_pred ccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 933 HGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 933 ~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+.... .+.+|++++..+|++|++ ++++.|++++++
T Consensus 359 ~v~~~~---~~~lRi~~~~~~~~~~i~---~~~~~l~~~l~~ 394 (396)
T PRK02627 359 LINVTG---DNVLRLLPPLIISKEEID---EAVDRLEEVLKE 394 (396)
T ss_pred EEeecC---CCEEEEECCcccCHHHHH---HHHHHHHHHHHh
Confidence 875332 377999999889999999 999999988764
No 412
>PRK05939 hypothetical protein; Provisional
Probab=99.60 E-value=2.7e-13 Score=156.45 Aligned_cols=142 Identities=16% Similarity=0.192 Sum_probs=116.4
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---h
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~ 289 (985)
..++++.+|+|.|.+. +.++.+|++++.++++++ +. +||+||+++..|+++...+.. ++..|++++++|. +
T Consensus 49 ~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~al-l~--~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e 122 (397)
T PRK05939 49 TAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTL-LR--AGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQ 122 (397)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-cC--CCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHH
Confidence 4457789999999876 668888898888877665 33 899999999999988777655 3568999999875 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001990 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (985)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~ 361 (985)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |.+++
T Consensus 123 ~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 123 NVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVD-NTMTSPWLFRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEE-CCcccccccCccccCCEEEEecCeecccC
Confidence 5666 7889999999987 78999999999999999999999995 34455555567889999999998 87764
No 413
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.59 E-value=2.1e-13 Score=152.68 Aligned_cols=302 Identities=16% Similarity=0.127 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH---HHhcCcEEEEEeC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSVGT 709 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~---~~~~G~~v~~v~~ 709 (985)
...++++++++++|.+.+ +.++||+.|...+++++ +.+++|+||+|.. ++.+. ....|++++.|++
T Consensus 35 ~v~~FE~~~ae~~G~k~a-va~~sgT~AL~laL~al-------~ig~GDeVI~ps~---TfvATan~i~~~Ga~PVFvDi 103 (374)
T COG0399 35 FVRRFEQAFAEYLGVKYA-VAVSSGTAALHLALLAL-------AIGPGDEVIVPSF---TFVATANAVLLVGAKPVFVDI 103 (374)
T ss_pred HHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHhc-------CCCCCCEEEecCC---chHHHHHHHHHcCCeEEEEec
Confidence 356889999999999986 55677777665444432 1358899999987 55554 4579999999999
Q ss_pred CCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCC-CCCCcCCCcEE
Q 001990 710 DAK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVC 787 (985)
Q Consensus 710 ~~~-g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~-~~~g~~g~Di~ 787 (985)
|++ +.+|++.+|++|+ ++|++|+..+ ..|..- |+++|.++|++||++++-|+||+.|..-- ...|.+| |+.
T Consensus 104 d~~T~nid~~~ie~aIt---~~tKAIipVh--l~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G-d~~ 176 (374)
T COG0399 104 DPDTLNIDPDLIEAAIT---PRTKAIIPVH--LAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG-DIG 176 (374)
T ss_pred CCcccCCCHHHHHHHcc---cCCeEEEEeh--hccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-ceE
Confidence 966 8999999999998 7899999864 788887 89999999999999999999997543221 1235554 777
Q ss_pred EeCCcccccccCCCCCCcceeeeecc-cccCcCCC-CccccCCCC-CCCCC-CCCCCCcccccchhhhHHHHHHHHHHHh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGI-PAPEK-SQPLGTIAAAPWGSALILPISYTYIAMM 863 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg-~~~g~~~~~-~~~~~-~~~t~~i~s~~~g~~~~~~~A~a~l~~l 863 (985)
++|+|-+=.+ ..| -+|++.+++ ++.+++.- +..|...+. .++.. ..|+ |.. ..-+. +++...
T Consensus 177 ~fSF~~~K~i--ttg--EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~-N~r------m~~iq---AAigl~ 242 (374)
T COG0399 177 AFSFHATKNL--TTG--EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGY-NYR------LTEIQ---AAIGLA 242 (374)
T ss_pred EEEecCCCCc--ccc--CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeeccc-ccC------HHHHH---HHHHHH
Confidence 7777643322 222 357777774 44433210 011111100 00000 0011 111 00111 112222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCC-ceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccC----C
Q 001990 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP----T 936 (985)
Q Consensus 864 g~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~-~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~----~ 936 (985)
+-+.+.+..++-.+++++..+.|++. +.+....... ...+.+.+.++. .+.+-+.+.+.|.++||... +
T Consensus 243 QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~----~~~~R~~l~~~L~~~gi~~~~~~~P 318 (374)
T COG0399 243 QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE----EGISRDALMESLKEAGVGAVVYFRP 318 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC----CCCCHHHHHHHHHhCCCCceEEeec
Confidence 22334455555566777778888762 2222221111 234445555541 14677899999999977631 1
Q ss_pred CC---------------CCC-----CCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 937 MS---------------WPV-----PGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 937 ~~---------------~pv-----~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
+. +|. ...+.+-.....|.+|++ +.+++|++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~---~V~~~l~~~~~ 372 (374)
T COG0399 319 LHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVD---RVIEALKEVLG 372 (374)
T ss_pred cccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHH---HHHHHHHHHhc
Confidence 10 121 245777777889999999 99999998764
No 414
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=2.6e-13 Score=155.67 Aligned_cols=286 Identities=13% Similarity=0.115 Sum_probs=175.8
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC--
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~-~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-- 711 (985)
.++++.+++++|++..++..++|++. +..++++.+. .++ ++|+++.+.++.+...++..|.+++.+|.+.
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~~-----~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDE--AIDLLVRALC-----VPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCc
Confidence 47888999999988766666666542 2223333321 244 6899988766555555678999999999742
Q ss_pred CC-CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEEccccccccCCC--CCCcCCCc
Q 001990 712 KG-NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLT--SPGYIGAD 785 (985)
Q Consensus 712 ~g-~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~--~g~lliVD~a~~~~~~g~~--~~g~~g~D 785 (985)
+| .+|++++.+.+. .+++++|++++| |++|.+. +.+++.++++. +++++++|+++..-..... ........
T Consensus 135 ~~~~~d~~~l~~~~~--~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 135 DGFHADVPAIVAAAL--ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDN 211 (364)
T ss_pred cCCCcCHHHHHHHHh--ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCC
Confidence 33 579999866553 168899999999 5799998 77777777764 4789999998742111000 00011112
Q ss_pred -EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 786 -VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 786 -i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
+++.|+.|+|+. .|.++|++++++++++.+.... ...++++ ....++..+|..-.
T Consensus 212 vi~~~SfSK~~gl----~GlRvGy~v~~~~l~~~l~~~~--------------~~~~~~~------~~~~~a~~~l~~~~ 267 (364)
T PRK04781 212 LAVLRTLSKAHAL----AAARIGSLIANAELIAVLRRCQ--------------APYPVPT------PCAALAEQALSAPA 267 (364)
T ss_pred EEEEecChhhccc----ccceeeeeeCCHHHHHHHHhcc--------------CCCCCCH------HHHHHHHHHHhccc
Confidence 556677777743 4789999999887765543210 0011111 11111222332111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CC-
Q 001990 865 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WP- 940 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~p- 940 (985)
.+-+.+..+...++++++.+.|++. +....+ +.+. .+.++++ +..++.+.|.++||.+.... ++
T Consensus 268 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~~g~---f~~~~~~--------~~~~~~~~l~~~gI~v~~~~~~~~ 335 (364)
T PRK04781 268 LAVTARRVAEVRAERERLHAALAQLPGVRRVYP-SQGN---FLLVRFD--------DAEAAFQALLAAGVVVRDQRAAPR 335 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCCc---EEEEEcC--------CHHHHHHHHHHCCeEEeeCCCCCC
Confidence 1223334445566778888888762 222222 2222 2345542 45788999999999875432 22
Q ss_pred CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 941 VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 941 v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.++++||++ .+++|.+ +|+++|+++.
T Consensus 336 ~~~~~Ris~---~~~~~~~---~l~~al~~~~ 361 (364)
T PRK04781 336 LSDALRITL---GTPEQND---RVLAALQRTQ 361 (364)
T ss_pred CCCeEEEeC---CCHHHHH---HHHHHHHHHH
Confidence 357899998 4789999 9999998754
No 415
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=8.8e-13 Score=153.74 Aligned_cols=154 Identities=18% Similarity=0.189 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+. .+.+++|+.++.+++.++. .++++||++...|+.... .+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~-al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEGGTA-ALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 4578899999999887 4667888877755554432 467899998876664432 24568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|++++.+. ...|-++|+|+++
T Consensus 136 ~-----d~~~l~~ai~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~a~a~~~--~~~pl~~gaDivv 204 (427)
T PRK05994 136 D-----DPASFERAIT---PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAGLPLIVDNTLASPY--LIRPIEHGADIVV 204 (427)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCccccc--cCCccccCCcEEE
Confidence 3 8999999997 78999999998 6799998 89999999999999999999986443 2356678999999
Q ss_pred eCCcccccccCCCCCCcceeee
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIG 810 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~ 810 (985)
.|+||+++.+ |++-+|+++
T Consensus 205 ~S~tK~lgg~---~~~~gG~v~ 223 (427)
T PRK05994 205 HSLTKFLGGH---GNSMGGIIV 223 (427)
T ss_pred EcCccccCCC---CCcEEEEEE
Confidence 9999998532 333345444
No 416
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.59 E-value=7.1e-14 Score=160.19 Aligned_cols=301 Identities=17% Similarity=0.135 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCC-C
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 711 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~-~ 711 (985)
.+.++++.+++++|.+.+ +.++||+.|.+.++.++ |.+++++||+|..........+...|+++++++++ +
T Consensus 26 ~~~~fE~~~a~~~g~~~~-~~~~sgt~Al~~al~~l-------~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYA-VAVSSGTSALHLALRAL-------GLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSEE-EEESSHHHHHHHHHHHT-------TGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChhHHHHHHHHhc-------CCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCC
Confidence 577899999999998875 56778887775555542 23478999999875544555567899999999998 5
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEccccccccCC-CCCCcCCCcEEEeC
Q 001990 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 790 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~-~~~g~~g~Di~~~s 790 (985)
++.+|+++++++|+ ++|++|++++ ..|... |+++|.++|+++|+++|-|+||+.+..-- ...|.+| |+.++|
T Consensus 98 ~~~id~~~~~~~i~---~~t~ai~~~h--~~G~~~-d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g-d~~~fS 170 (363)
T PF01041_consen 98 TLNIDPEALEKAIT---PKTKAILVVH--LFGNPA-DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG-DIAIFS 170 (363)
T ss_dssp TSSB-HHHHHHHHH---TTEEEEEEE---GGGB----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS-SEEEEE
T ss_pred cCCcCHHHHHHHhc---cCccEEEEec--CCCCcc-cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC-CceEec
Confidence 69999999999999 8999999975 779887 89999999999999999999996543111 1235555 999999
Q ss_pred Cc--ccccccCCCCCCcceeeeecc-cccCcCCC-CccccCCCC-CCCCCCC-CCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 791 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGI-PAPEKSQ-PLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 791 ~h--Ktl~~p~g~GGPg~G~l~~~~-~l~~~lpg-~~~g~~~~~-~~~~~~~-~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
+| |.+ +.| .+|++++++ ++.+.+.- +..|...+. .+..... ...|... +...++.+...|
T Consensus 171 f~~~K~i--~~g----eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm----~~~~AAigl~QL---- 236 (363)
T PF01041_consen 171 FHPTKII--TTG----EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRM----SELQAAIGLAQL---- 236 (363)
T ss_dssp SSTTSSS---SS----S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-----BHHHHHHHHHHH----
T ss_pred CCCCCCC--cCC----CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCccccc----HHHHHHHHHHHH----
Confidence 87 444 222 347888874 33322210 001111000 0000000 0011111 111122222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeeE-cC-CCC--ceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC--
Q 001990 865 SKGLTEASKIAILNANYMAKRLEKHYPILF-RG-VNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-- 938 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~-~g-~~~--~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-- 938 (985)
+.+.+..++-.++++++.+.|.+...+.. .. +.. ...+.+.+.++. ....+.+++.+.|.++||.+....
T Consensus 237 -~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~---~~~~~rd~l~~~L~~~GI~~~~~~~~ 312 (363)
T PF01041_consen 237 -KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD---EALADRDELVEALRARGIETRPHYPK 312 (363)
T ss_dssp -HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC---CGCSTHHHHHHHHHHTTBEEBCSTSS
T ss_pred -HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc---cccchHHHHHHHHHHCCCcccccccC
Confidence 23455555667788889999987433321 11 111 123334555541 001357899999999999764321
Q ss_pred ----CC------------C-------CCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 939 ----WP------------V-------PGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 939 ----~p------------v-------~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
.| . ...|.+-.+...+++|++ +.+++|+
T Consensus 313 pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~---~I~~~ir 363 (363)
T PF01041_consen 313 PLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVD---YIAEAIR 363 (363)
T ss_dssp CGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHH---HHHHHHH
T ss_pred chhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHH---HHhhccC
Confidence 01 0 134667777788999999 9888874
No 417
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.59 E-value=3.2e-13 Score=149.22 Aligned_cols=352 Identities=15% Similarity=0.206 Sum_probs=224.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCCccc--eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhHHHHHHHHH
Q 001990 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 216 (985)
Q Consensus 139 ~~lp~~~~~~se~e~~~~~~~~~~~n~~~~--~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~sqg~l~~i~e~ 216 (985)
..|| ..+++..++++.+.+....+-.+. -..|..++. ++... .+.. +-+.-|+|-.+.+.++.-+.-.++
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~---~~~~~-~l~~--~~~~k~N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG---EPELD-KLIM--EAYNKFNPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC---Ccchh-hHHH--HHHhhcCccCccccchhHHHHHHH
Confidence 4577 589999999999998766543321 123444433 22221 2222 114445888888999999999999
Q ss_pred HHHHHHhhCCCC-cceeeccchHHHHHHHHHHhhhhc----C-CCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch-
Q 001990 217 QTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQK----G-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (985)
Q Consensus 217 q~~ia~L~g~~~-~~~sl~~~~ta~~ea~~~a~~~~~----~-~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~- 289 (985)
-+|+|.|++.+. ++.+.+.|+|-++.++....+..+ + ....|+++.++|.++- .+++.++++++.++++
T Consensus 126 Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~e----K~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 126 VNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFE----KAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHH----HHHhhEEEEEEeeeccc
Confidence 999999999875 355567777744333222221111 1 2345667766665544 4466789999988764
Q ss_pred -----hh---hc-cCCCEeEEEEEcCC-CCeeeccHHHHHHHHHh-CCcEEEEEeccccccC---CCCCCcccce-----
Q 001990 290 -----DI---DY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTI---LKPPGELGAD----- 350 (985)
Q Consensus 290 -----~l---~~-l~~~t~~V~v~~pn-~~G~i~dl~~I~~~a~~-~galliV~a~~~alg~---l~~p~~~GaD----- 350 (985)
|+ .+ ++++|.+|+...|| ++|.++|+++|.++.-+ ++..++|++.+-++-. ...+.+||.-
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 22 33 78999999999996 59999999999999999 9999999653322211 1122344432
Q ss_pred EEEecCccccccCCCCCCceE-EEEEchhhHhcCCCceeeeeecCCCC--cceEEecccccccccccccCCCccchhHHH
Q 001990 351 IVVGSAQRFGVPMGYGGPHAA-FLATSQEYKRMMPGRIVGVSIDSSGK--PALRVAMQTREQHIRRDKATSNICTAQALL 427 (985)
Q Consensus 351 i~v~s~k~lg~P~~~GGP~~G-~l~~~~~~~~~lp~~~vG~s~d~~g~--~~~~l~l~tre~~~rre~atsni~t~~~l~ 427 (985)
-.-.+++++|.-+ +|++ .++.+++++ |--++- ..|-.|. ..+.++.+ ++.+
T Consensus 282 Sisa~~HKYGl~~----~G~~~vl~r~k~~~---~~q~~~-~~~w~Gg~y~s~TlngS---------R~g~--------- 335 (491)
T KOG1383|consen 282 SISADGHKYGLAP----AGSSWVLYRNKELL---PHQLFF-HTDWLGGIYASPTLNGS---------RPGS--------- 335 (491)
T ss_pred eEeeccceeeeee----cCcEEEEEcccccc---cceEEE-eccccCccccCcccccC---------Cccc---------
Confidence 2233346665421 2344 344444432 211111 0111111 11222221 1111
Q ss_pred HHHHHHH--HHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC--HHHHHHHHHHcCceeeee-
Q 001990 428 ANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV- 502 (985)
Q Consensus 428 a~~aa~y--~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~- 502 (985)
..++.| |..+|.+|+.+..+++.+.+.+|+++|+++++++++++|...-+.+.... -.++.+.|.++||.+..+
T Consensus 336 -~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq 414 (491)
T KOG1383|consen 336 -QVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQ 414 (491)
T ss_pred -HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccC
Confidence 233333 47899999999999999999999999999966999876543222333333 789999999999999876
Q ss_pred cCCeEEEEeccCCCHHHH-HHHHHHHhC
Q 001990 503 DSNTVTASFDETTTLEDV-DKLFIVFAG 529 (985)
Q Consensus 503 ~~~~lris~~~~~t~edi-d~ll~~l~~ 529 (985)
.+..+.+|++-.++++++ |+|+..+..
T Consensus 415 ~P~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 415 FPAAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred CCCceEEEEEeeeccHHHHHHHHHHHHH
Confidence 367999999999999885 777777764
No 418
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.59 E-value=2.6e-13 Score=159.36 Aligned_cols=286 Identities=13% Similarity=0.100 Sum_probs=176.3
Q ss_pred HHHHHHHHHhCC--C-ccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC
Q 001990 636 NLGEWLCTITGF--D-SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (985)
Q Consensus 636 el~~~la~l~G~--~-~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~ 711 (985)
++++.+++.++. . ...+..++|++ +. .++++.+. .++|.|+++++.+..+...++..|++++.+|.++
T Consensus 125 ~lr~~ia~~~~~~~~~~~~Iiit~G~~~al---~~~~~~l~-----~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 196 (431)
T PRK15481 125 ELHAWAARWLRDDCPVAFEIDLTSGAIDAI---ERLLCAHL-----LPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA 196 (431)
T ss_pred HHHHHHHHHHhhccCCcCeEEEecCcHHHH---HHHHHHhC-----CCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC
Confidence 345555555542 2 22454545544 33 23333321 4678999999977777777889999999999976
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEE-cC-CCccccccCH---HHHHHHHHHc-CCEEEEEcccccccc-CCCCC--CcC
Q 001990 712 KGNINIEELRKAAEANRDNLSTLMVT-YP-STHGVYEEGI---DEICKIIHDN-GGQVYMDGANMNAQV-GLTSP--GYI 782 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~~~t~~Vvi~-~p-n~~G~i~~di---~eI~~la~~~-g~lliVD~a~~~~~~-g~~~~--g~~ 782 (985)
+| +|+++|+++++ +++++++++ +| |++|.+. +. ++|.++|+++ ++++++|+++..-.. +...+ ...
T Consensus 197 ~g-~~~~~l~~~~~---~~~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 271 (431)
T PRK15481 197 EG-MQPEKLERALA---QGARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTT 271 (431)
T ss_pred CC-CCHHHHHHHHh---cCCCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCC
Confidence 65 89999999997 577888876 78 5799987 44 5999999999 999999998742111 11111 111
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHH
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~ 862 (985)
.--+++.|++|+|+ | |.++|+++.++++.+.+.... .....+++ .....++..++.
T Consensus 272 ~~vi~~~SfSK~~~-~----GlRiG~~i~~~~~~~~~~~~~------------~~~~~~~s------~~~q~a~~~~l~- 327 (431)
T PRK15481 272 QRWALIRSVSKALG-P----DLRLAFVASDSATSARLRLRL------------NSGTQWVS------HLLQDLVYACLT- 327 (431)
T ss_pred CCEEEEeeeccccC-C----CceeEEEeCCHHHHHHHHHHH------------hccccCCC------HHHHHHHHHHHh-
Confidence 22367788888885 4 678999999877655442100 00001111 111111222232
Q ss_pred hch--hhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-C
Q 001990 863 MGS--KGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-S 938 (985)
Q Consensus 863 lg~--~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~ 938 (985)
-+. +-+.+..+...++.+++.+.|++ ++.+.. +.+..+ +.++++ .+..++.+.|.++||.+... .
T Consensus 328 ~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~--p~gg~f--~~~~l~-------~~~~~~~~~l~~~gV~v~pg~~ 396 (431)
T PRK15481 328 DPEYQARLAQARLFYAQRRQKLARALQQYGIAIPS--PGDGLN--LWLPLD-------TDSQATALTLAKSGWLVREGEA 396 (431)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--CCCeEE--EEEECC-------CCHHHHHHHHHHCCcEEecCCc
Confidence 121 11344555667777888888876 443322 222222 345543 24678899999999987432 2
Q ss_pred CCC---CCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 939 WPV---PGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 939 ~pv---~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
|.. .+++||+++.. ++++++ ++++.|++++.
T Consensus 397 f~~~~~~~~iRis~~~~-~~~~i~---~~~~~l~~~~~ 430 (431)
T PRK15481 397 FGVSAPSHGLRITLSTL-NDAEIN---RLAADLHQALN 430 (431)
T ss_pred cccCCCCCeEEEEcCCC-ChHHHH---HHHHHHHHHhc
Confidence 221 35799998763 578999 99998887753
No 419
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.59 E-value=8.3e-14 Score=154.48 Aligned_cols=160 Identities=22% Similarity=0.210 Sum_probs=131.5
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhhc-
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY- 293 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~~- 293 (985)
.+|+.+++|.|.+. +.+|++|.+++.+++..+. +.+++|+.....+..+...++.....+|++...+|++++++
T Consensus 81 ~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~---~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~ 155 (409)
T KOG0053|consen 81 VLESGIAALEGAAH--ALLFSSGMAAITVALLHLL---PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKI 155 (409)
T ss_pred HHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc---CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHH
Confidence 46689999999887 7788999988887776553 37899999999999999999888889999999999876653
Q ss_pred ---cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001990 294 ---KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (985)
Q Consensus 294 ---l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GGP 368 (985)
++++|++|+++.| |++..+.||++|+++||++|++++|+ +.++-++..+|-.+|||||+.|+ |.+++.-..
T Consensus 156 ~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVD-nTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdv--- 231 (409)
T KOG0053|consen 156 LKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVD-NTFGSPYNQDPLPLGADIVVHSATKYIGGHSDV--- 231 (409)
T ss_pred HHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEe-CCcCcccccChhhcCCCEEEEeeeeeecCCcce---
Confidence 6788999999998 89999999999999999999999995 66777778889999999999998 988753221
Q ss_pred ceEEEEEc-hhhHhcC
Q 001990 369 HAAFLATS-QEYKRMM 383 (985)
Q Consensus 369 ~~G~l~~~-~~~~~~l 383 (985)
=+|.++++ +++.+++
T Consensus 232 i~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 232 IGGSVVLNSEELASRL 247 (409)
T ss_pred eeeEEecCcHHHHHHH
Confidence 12566664 4554443
No 420
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.59 E-value=1.9e-13 Score=157.58 Aligned_cols=207 Identities=21% Similarity=0.206 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH----HhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~----~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.+ +.+++|+.++.+++.++. .++++||++...|+.....+ ...|++++.++.
T Consensus 63 ~~~Le~~lA~~~g~~~~-i~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 63 RTALEEQLAALEGGAYG-RAFSSGMAATDCLLRAVL--------RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 56899999999999876 444667666644444332 46789999887665433222 235888888775
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...|..+|+|+++
T Consensus 134 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~-dl~~I~~la~~~gi~lIvD~a~a~~~--~~~p~~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT---PRTKLIWVETPTNPLLSIT-DIAALAELAHDAGAKVVVDNTFASPY--LQQPLALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCcceec-CHHHHHHHHHHcCCEEEEECCCCccc--cCCchhhCCcEEE
Confidence 38999999997 78999999999 5789987 89999999999999999999985432 2345567899999
Q ss_pred eCCcccccccCCCCCCc---ceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhc
Q 001990 789 LNLHKTFCIPHGGGGPG---MGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg---~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg 864 (985)
+|++|+|+ ||+ +|+++++ +++...+.... ..++...+ + ..+|..+ .+
T Consensus 203 ~S~sK~l~------g~~~~~gG~vv~~~~~l~~~~~~~~-------------~~~g~~~s-----~---~~a~l~~--~~ 253 (388)
T PRK07811 203 HSTTKYIG------GHSDVVGGALVTNDEELDEAFAFLQ-------------NGAGAVPG-----P---FDAYLTL--RG 253 (388)
T ss_pred ecCceeec------CCCCcEEEEEEECCHHHHHHHHHHH-------------HhcCCCCC-----H---HHHHHHH--hc
Confidence 99999994 442 5777776 44433322100 00011111 1 1123222 23
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc
Q 001990 865 SKGLTEASKIAILNANYMAKRLEKH 889 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~~ 889 (985)
-+.+..+.++..+++..+.+.|++.
T Consensus 254 L~tl~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 254 LKTLAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 3345566677788999999999863
No 421
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.59 E-value=5.7e-13 Score=155.21 Aligned_cols=311 Identities=12% Similarity=0.100 Sum_probs=176.5
Q ss_pred hcHHHHHHHHHHHHHHHhCC--CccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~ 705 (985)
+|..++.+.+.+++.+.+|. +...+..++|++. +..++++.+. .++++|+++.+.+..+...++..|++++
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~ 146 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH--AAEIIIKVLA-----RPEANILLPRPGFPDVETYAIFHHLEIR 146 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH--HHHHHHHHHc-----CCCCEEEEcCCCCcCHHHHHHHcCCEEE
Confidence 56555555555555554443 4445555555441 2233333331 4678999999887777777889999999
Q ss_pred EEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cCCC-C
Q 001990 706 SVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-S 778 (985)
Q Consensus 706 ~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g~~-~ 778 (985)
.++.++ +..+|+++|+++++ ++++++++++| |++|.+. ..+++|.++|+++|+++++|+++..-. .+-. .
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~~~---~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 223 (409)
T PLN00143 147 HFDLLPEKGWEVDLDAVEAIAD---ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223 (409)
T ss_pred EEeccCCCCCcCCHHHHHHhcc---cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCc
Confidence 998742 35789999999886 67889999999 5899986 138889999999999999999874211 1100 1
Q ss_pred C-CcCC---CcEEEeCCcccccccCCCCCCcceeeeec-c-cccCcCC--CCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 779 P-GYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-K-HLAPFLP--SHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 779 ~-g~~g---~Di~~~s~hKtl~~p~g~GGPg~G~l~~~-~-~l~~~lp--g~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
+ ..+. -=+++.|+.|+|+. .|.++|++++. + .+.+.+. ..+ .. ........+ .
T Consensus 224 ~~~~~~~~~~vi~~~SfSK~f~~----pGlRvG~~v~~~p~~~~~~~~~~~~~-~~---------~~~~~~~~~-----~ 284 (409)
T PLN00143 224 PMGLFASIVPVITLGSISKRWMI----PGWGLGWLVTCDPSGLLQICEIADSI-KK---------ALNPAPFPP-----T 284 (409)
T ss_pred chhhhcccCcEEEEccchhhcCC----CccceEEEEeeCchhhhhhHHHHHHH-HH---------HHhccCCCC-----c
Confidence 1 1111 11566777777754 57899999883 3 2322110 000 00 000000111 1
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeEcCCCCceeEEEEEEecCccccCCC-CHHHHHHHH-
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL- 927 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~-~~i~~~g~~~~~~~~~vv~~~~~~~~~g~-~~~~l~~~L- 927 (985)
....++..++.....+-+.+..+...++.+++.+.|++. .......+++..+ +.++++... ..+. +..+++..|
T Consensus 285 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f--~w~~l~~~~-~~~~~~~~~~~~~ll 361 (409)
T PLN00143 285 FIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFF--ALVKLNLLL-LEDIEDDMEFCLKLA 361 (409)
T ss_pred hHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEE--EEEecchhh-cCCCCCHHHHHHHHH
Confidence 111111222221112234455555666667777888762 1111111212222 334543100 0012 355666544
Q ss_pred HHCCCccCC-CCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 928 MDYGFHGPT-MSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 928 ~e~Gi~~~~-~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
.++|+.+.. ..|..++++|++++ .++++++ +.++.|++.+++.
T Consensus 362 ~~~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~---~al~rl~~~l~~~ 405 (409)
T PLN00143 362 KEESLIILPGVTVGLKNWLRITFA--VEQSSLE---DGLGRLKSFCGRH 405 (409)
T ss_pred HhCCEEEeCccccCCCCeEEEEEc--CCHHHHH---HHHHHHHHHHHHh
Confidence 678998643 22334689999997 4578888 8888887776544
No 422
>PLN02721 threonine aldolase
Probab=99.59 E-value=1.5e-13 Score=156.81 Aligned_cols=273 Identities=15% Similarity=0.110 Sum_probs=172.3
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc----
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---- 288 (985)
..++++.+|+++|.+. +.++.+||.+..+++.++. ..+||+|++++..|.+...... .+...|++++.++.
T Consensus 42 ~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~--~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHC--DVRGSEVILGDNSHIHLYENGG-ISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred HHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHc--cCCCCeEEEcCccceehhcccc-hhhhcCceeEecCCCcCC
Confidence 3567889999999875 5566777766555544432 1278999999999976554210 13456888877653
Q ss_pred ----hhhhc-cC-------CCEeEEEEEcC--CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCC----CCCC--
Q 001990 289 ----KDIDY-KS-------GDVCGVLVQYP--GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPG-- 345 (985)
Q Consensus 289 ----~~l~~-l~-------~~t~~V~v~~p--n~~G~i~d---l~~I~~~a~~~galliV~a~~~alg~l----~~p~-- 345 (985)
+++++ ++ +++++|+++++ |++|.+.| +++|.++||++|+++++|. ...++.. .++.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDG-ARIFNASVALGVPVHRL 195 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEc-hhhhcchhhhCCCHHHH
Confidence 45555 55 58999998764 46788765 7899999999999999953 2222210 1122
Q ss_pred cccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchh
Q 001990 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (985)
Q Consensus 346 ~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~ 424 (985)
..++|.++.+. |+|++ |..++++.++++++.+.... . ...++.+. .
T Consensus 196 ~~~~d~~~~s~sK~l~~------~~G~~~~~~~~~~~~~~~~~-----~-------------------~~~~~~~~---~ 242 (353)
T PLN02721 196 VKAADSVSVCLSKGLGA------PVGSVIVGSKSFIRKAKRLR-----K-------------------TLGGGMRQ---V 242 (353)
T ss_pred hhhCCEEEEecccccCC------ceeeEEecCHHHHHhHHHHH-----H-------------------hcCCCeeh---h
Confidence 34899988887 87754 33345667777765431100 0 00000000 1
Q ss_pred HHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEE-cCCCCcceEEEecC----C-HHHHHHHHHHcCce
Q 001990 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCA----D-AHAIASAAYKIEMN 498 (985)
Q Consensus 425 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~~~~~i~~~----~-~~~l~~~L~~~Gi~ 498 (985)
+..+. +++. .+ .+-++.+ ++..++++++++.|++++++.+ +..+..+-+.++.+ . ..++.++|.++||.
T Consensus 243 ~~~~~-~~~~-~l--~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 317 (353)
T PLN02721 243 GVLAA-AALV-AL--QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL 317 (353)
T ss_pred HHHHH-HHHH-HH--HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE
Confidence 11111 1110 11 1112222 3335678899999998844755 43332223444443 2 77899999999999
Q ss_pred eeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 499 ~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+.....+.+|++++.+++++|+++++++|..
T Consensus 318 v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 318 LMPGNSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EecCCCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9877678999999999999999999999974
No 423
>PRK05939 hypothetical protein; Provisional
Probab=99.59 E-value=5.3e-13 Score=153.97 Aligned_cols=226 Identities=15% Similarity=0.100 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH---HHHhcCcEEEEEeC
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGT 709 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~---~~~~~G~~v~~v~~ 709 (985)
...++++.++++.|.+.+ +.+++|..++.+++.++. +++++||+++..|+.+.. .+...|++++.++.
T Consensus 48 ~~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~ 118 (397)
T PRK05939 48 TTAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA 118 (397)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC
Confidence 356799999999998775 556677766644444331 467899999887776544 24568999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...|..+|+|+++
T Consensus 119 ~-----d~e~l~~~l~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~~~~gaDivv 187 (397)
T PRK05939 119 T-----DVQNVAAAIR---PNTRMVFVETIANPGTQVA-DLAGIGALCRERGLLYVVDNTMTSPW--LFRPKDVGASLVI 187 (397)
T ss_pred C-----CHHHHHHhCC---CCCeEEEEECCCCCCCCHH-hHHHHHHHHHHcCCEEEEECCccccc--ccCccccCCEEEE
Confidence 3 8999999997 88999999998 6799997 89999999999999999999885332 2356678999999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCC-CCcccc----CC-CCCCCCCCCCCCCcccccchhhhHHHHHHHHHHH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVS----TG-GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lp-g~~~g~----~~-~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~ 862 (985)
.|+||+|+. .|..+|.+++.....+... ...... .. +......... .. ...|.......| ++..
T Consensus 188 ~S~sK~~~g----~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~G~~~~p~~a--~l~~ 257 (397)
T PRK05939 188 NSLSKYIAG----HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKK---GL-RDMGATLSSEAA--HRIA 257 (397)
T ss_pred ecCeecccC----CCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHH---HH-HhcCCCCCHHHH--HHHH
Confidence 999999963 2344454444322111000 000000 00 0000000000 00 000111112223 3455
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhc
Q 001990 863 MGSKGLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 863 lg~~gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.|-+.+..++++..+++..+++.|++
T Consensus 258 rgl~tl~~R~~~~~~na~~la~~L~~ 283 (397)
T PRK05939 258 IGAETLALRVDRSCSNALALAQFLEA 283 (397)
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHh
Confidence 56677777888888999999999986
No 424
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=4.6e-13 Score=155.91 Aligned_cols=143 Identities=18% Similarity=0.191 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~v~~v~~ 709 (985)
...+++.++++.|.+.+ +.+++|+.+..+++.++. .++++||++...|+... ..++..|++++.++.
T Consensus 66 ~~~Le~~lA~leg~~~a-l~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEGGIGA-LAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 45788999999997654 667788876654544432 36789999887765432 224578999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ +++++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...|.++|+|+++
T Consensus 137 ~-----d~e~l~~ai~---~~tklV~l~sp~NPtG~v~-di~~I~~la~~~gi~vIvD~t~a~~~--~~~pl~~gaDivv 205 (431)
T PRK08248 137 S-----DPENFEAAIT---DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHGIPLIVDNTFASPY--LLRPIEHGADIVV 205 (431)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEeCCCCccc--cCChhHcCCCEEE
Confidence 3 8999999997 78999999998 6899998 89999999999999999999975322 2345578999999
Q ss_pred eCCccccc
Q 001990 789 LNLHKTFC 796 (985)
Q Consensus 789 ~s~hKtl~ 796 (985)
.|+||+++
T Consensus 206 ~S~tK~lg 213 (431)
T PRK08248 206 HSATKFIG 213 (431)
T ss_pred EcCccccC
Confidence 99999995
No 425
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.58 E-value=5.9e-13 Score=155.43 Aligned_cols=293 Identities=17% Similarity=0.162 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhcC--------c
Q 001990 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M 702 (985)
Q Consensus 634 ~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~G--------~ 702 (985)
..++.+.|++++... ...++.+||+++++++++.+|.| +++.+|| ...++||....++...| +
T Consensus 78 ~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 151 (420)
T TIGR00700 78 YVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY------TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGF 151 (420)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh------cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCC
Confidence 446777888887422 23577899999999999988876 2445566 47789998876654322 1
Q ss_pred -----EEEEEeCCCCCC-----------CCHHHHHHHHH--hcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcC
Q 001990 703 -----KIVSVGTDAKGN-----------INIEELRKAAE--ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (985)
Q Consensus 703 -----~v~~v~~~~~g~-----------iDle~L~~~i~--~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g 760 (985)
.+..+|...... -+++.+++.+. .+++++++|+++-. ...|.+.+ .+++|.++|++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 231 (420)
T TIGR00700 152 GPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHG 231 (420)
T ss_pred CCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 123333311000 12567777763 23478888888643 35676642 2999999999999
Q ss_pred CEEEEEccccccccCCCCCC--------cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCC
Q 001990 761 GQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (985)
Q Consensus 761 ~lliVD~a~~~~~~g~~~~g--------~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~ 832 (985)
+++|+|+++. ++.+.+ ..-+|++++ .|.++ +|..+|++++++++++.+.....
T Consensus 232 illI~DEV~t----g~gr~g~~~a~~~~~~~pDi~~l--sK~l~-----~G~pig~v~~~~~i~~~~~~~~~-------- 292 (420)
T TIGR00700 232 IVFIADEVQT----GFARTGAMFACEHEGPEPDLITT--AKSLA-----DGLPLSGVTGRAEIMDAPAPGGL-------- 292 (420)
T ss_pred CEEEEEeccc----CCcccchhHHHhhcCCCCCEEEe--ecccc-----CCcceEEEEecHHHHhhcCCCCc--------
Confidence 9999999873 222222 123788764 47773 45778999999887765432110
Q ss_pred CCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEE
Q 001990 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIV 907 (985)
Q Consensus 833 ~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv 907 (985)
. +++.|+++.++++.+.+..+..+++.+ +.....++++++|++. ++.. ..+. +.. +.+
T Consensus 293 ------~----~T~~~~pl~~aaa~a~l~~l~~~~~~~---~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i 355 (420)
T TIGR00700 293 ------G----GTYAGNPLACAAALAVLAIIESEGLIE---RARQIGRLVTDRLTTLKAVDPRIGDVRGL-GAM---IAV 355 (420)
T ss_pred ------C----CCCCcCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHhhCCCEEEeecc-ceE---EEE
Confidence 0 112235555666777777776665544 3444556677666542 2211 1222 222 223
Q ss_pred EecCccc--cCCCCHHHHHHHHHHCCCccCCC-CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 908 DLRGLKN--TAGIEPEDVAKRLMDYGFHGPTM-SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 908 ~~~~~~~--~~g~~~~~l~~~L~e~Gi~~~~~-~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.+..-.. ........+.+.|.++|+.+... .+ .+.||++|....|+++|+ ++++.|.+++.
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~---~~~~~l~~~l~ 419 (420)
T TIGR00700 356 ELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPLTIGDELLS---EGLDILCAILA 419 (420)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCCcCHHHHH---HHHHHHHHHhh
Confidence 2210000 00011345667778899987432 12 378999998888999999 99999988753
No 426
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.58 E-value=2.7e-13 Score=155.10 Aligned_cols=271 Identities=16% Similarity=0.098 Sum_probs=178.8
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCchhhh
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID 292 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~~l~ 292 (985)
..++++.+|++.|.+. +..+.+||+++.++++++ +. +||+||++...|..+...+...+..+|++++++|.++.+
T Consensus 66 ~~~lE~~la~leg~~~--av~~sSG~aAi~~al~al-l~--~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSL-IK--KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 3457789999999876 778999999999888775 33 899999998887777766655566789999999986543
Q ss_pred c--cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001990 293 Y--KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (985)
Q Consensus 293 ~--l~~-~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~P~~~GG 367 (985)
. +++ ++++|++++| |.++.+.|+++|+++||++| ++|| +.++.+....|-.+|+|++++|+ |.++++-..
T Consensus 141 ~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD-~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~-- 215 (384)
T PRK06434 141 SLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVD-ATFASPYNQNPLDLGADVVIHSATKYISGHSDV-- 215 (384)
T ss_pred heeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEE-CCCCCcccCCchhcCCCEEEeecccccCCCCCc--
Confidence 3 555 6999999987 68999999999999999998 4564 34555556677789999999999 877654211
Q ss_pred CceEEEEEch-hhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHH
Q 001990 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (985)
Q Consensus 368 P~~G~l~~~~-~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (985)
-.|.+.+++ ++.+++- ..++..|.. . ++ ..|+ +...|-+-++.+
T Consensus 216 -~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~~-~---~~---~~A~--l~~~gL~tL~~R 260 (384)
T PRK06434 216 -VMGVAGTNNKSIFNNLV-------------------------ERRKTLGSN-P---DP---IQAY--LALRGLKTLGLR 260 (384)
T ss_pred -eEEEEecCcHHHHHHHH-------------------------HHHHhcCCC-C---CH---HHHH--HHHhCCCcHHHH
Confidence 136666643 3333220 000011100 0 11 1222 345566677888
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-Ec-CC---------CCcceEEEecCC---HHHHHHHHHH--cCceee----------
Q 001990 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL---------PFFDTVKVKCAD---AHAIASAAYK--IEMNLR---------- 500 (985)
Q Consensus 447 ~~~~~~~a~~l~~~L~~~g~~~-~~-~~---------~~~~~~~i~~~~---~~~l~~~L~~--~Gi~~~---------- 500 (985)
.++..+++..+++.|++++.++ |+ +. -+..-|+|.+++ +.++.+.|.= .+..+.
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~ 340 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPV 340 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCC
Confidence 8889999999999999875443 32 11 112346776654 3344444431 122110
Q ss_pred -----e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 501 -----V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 501 -----~----------~~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 341 ~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~ 383 (384)
T PRK06434 341 ETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALS 383 (384)
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhc
Confidence 0 113678999888765555666666664
No 427
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.58 E-value=1.2e-13 Score=160.59 Aligned_cols=166 Identities=23% Similarity=0.269 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC------cHHHHHhcCcEEEE
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT------NPATAAMCGMKIVS 706 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~------~~~~~~~~G~~v~~ 706 (985)
.+.++++.+++++|.+.+ +.+++|+.|+..++. .+ .++++||+++..|.. .+..++..|+++++
T Consensus 123 r~~~le~~lA~l~gae~a-lvv~sg~aAi~l~l~---~l------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~ 192 (454)
T TIGR00474 123 RYSHVEGLLCELTGAEDA-LVVNNNAAAVLLALN---TL------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVE 192 (454)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHH---Hh------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEE
Confidence 467899999999999875 456777766533332 11 367899998865421 23446678999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CC--ccc--cccCHHHHHHHHHHcCCEEEEEcccccc-----cc--
Q 001990 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-ST--HGV--YEEGIDEICKIIHDNGGQVYMDGANMNA-----QV-- 774 (985)
Q Consensus 707 v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~--~G~--i~~di~eI~~la~~~g~lliVD~a~~~~-----~~-- 774 (985)
++.+ +..|+++++++|+ ++|++|+++++ |+ .|. +. |+++|+++||++|++++||.+...- ++
T Consensus 193 v~~~--~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~-dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~ 266 (454)
T TIGR00474 193 VGTT--NRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEV-SIAELVALGREHGLPVMEDLGSGSLVDLSRYGLP 266 (454)
T ss_pred eCCC--CCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCC-CHHHHHHHHHHcCCeEEEECCCcccccchhccCC
Confidence 8764 3468999999997 88999998887 43 463 44 8999999999999999999752110 00
Q ss_pred --C-CCCCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCC
Q 001990 775 --G-LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP 820 (985)
Q Consensus 775 --g-~~~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lp 820 (985)
+ +..+.++|+|++++|+||+| |||.+|++++++++++.+.
T Consensus 267 ~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 267 DEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLK 309 (454)
T ss_pred CCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhh
Confidence 0 11344689999999999998 5788899999987776654
No 428
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.58 E-value=3.3e-13 Score=158.56 Aligned_cols=285 Identities=12% Similarity=0.007 Sum_probs=177.2
Q ss_pred HHHHHHHhhCCCCcceee---ccchHHHHHHHHHHhhhhcCCCCEEEEcC------CCChhHHHHHHHhhcCCCeEE---
Q 001990 216 FQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS------NCHPQTIDICITRADGFDIKV--- 283 (985)
Q Consensus 216 ~q~~ia~L~g~~~~~~sl---~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~------~~h~s~~~~~~~~a~~~gi~v--- 283 (985)
+++..+++++.+.+...+ ..+|+.+..++++++. . +||+|+..+ ..|.+.....+ ....++.+
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~-~--pgD~Il~~d~~~gGhl~H~~~~~g~~--~s~~~~~~~~~ 159 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL-Q--PHDRIMGLDLPHGGHLSHGYQTDGKK--ISATSIYFESM 159 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC-C--CCCEEEECCCCcCcchhhhhhhcccc--cccceEEEEee
Confidence 345678888887743321 2677888888888763 3 899999844 33444333221 11122221
Q ss_pred --EE------eCchhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-----CCCccc
Q 001990 284 --VV------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELG 348 (985)
Q Consensus 284 --~~------~~~~~l~~-l~-~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~-----~p~~~G 348 (985)
.+ +|+++|++ +. .+++.|++.. +.+|...|+++|.++||++|++++||+ .++.|++. .|- .+
T Consensus 160 ~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~~s~~~D~a~i~~ia~~~ga~LlvD~-AH~~Gli~~~~~~~p~-~~ 236 (475)
T PLN03226 160 PYRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SAYPRDWDYARMRKIADKVGALLMCDM-AHISGLVAAQEAASPF-EY 236 (475)
T ss_pred eeeecCCCCCcCHHHHHHHHhhcCCeEEEEec-CcCCCccCHHHHHHHHHHcCCEEEEEc-hhhhCcccCCCCCCCC-CC
Confidence 11 25667776 43 4566665543 457888899999999999999999942 34555443 222 27
Q ss_pred ceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHH
Q 001990 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (985)
Q Consensus 349 aDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~ 427 (985)
+|++++++ |+|++|. .|+++++++.++.+.+. .|...+ |....+ +.... ...++++ +....
T Consensus 237 ~Div~~t~hK~L~GP~------Gg~I~~~~~~~~~~~~g-~~~~~d------~~~~i~-~a~~~-~~~g~p~---~~~ia 298 (475)
T PLN03226 237 CDVVTTTTHKSLRGPR------GGMIFFRKGPKPPKGQG-EGAVYD------YEDKIN-FAVFP-GLQGGPH---NHTIA 298 (475)
T ss_pred CeEEEecCcccccCCC------ceEEEEchhhcccccCC-CccHHH------HHHHhc-cccCC-ccCCCch---HHHHH
Confidence 99999998 8886553 37889888765443221 110000 100000 00000 0122222 24455
Q ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcceEEEec--CC--HHHHHHHHHHcCceeee-
Q 001990 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKC--AD--AHAIASAAYKIEMNLRV- 501 (985)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~--~~--~~~l~~~L~~~Gi~~~~- 501 (985)
++.+++ .++...|.++++++..+++++|++.|.+.| ++++.. ...+.+.|.+ .+ ..++.+.|.+.||.+..
T Consensus 299 al~aAl--~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~ 375 (475)
T PLN03226 299 ALAVAL--KQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKN 375 (475)
T ss_pred HHHHHH--HHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCC
Confidence 555555 566667889999999999999999999987 998853 2223444444 22 67888999999997643
Q ss_pred --------ecCCeEEE----EeccCCCHHHHHHHHHHHhC
Q 001990 502 --------VDSNTVTA----SFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 --------~~~~~lri----s~~~~~t~edid~ll~~l~~ 529 (985)
+.+..+|+ ..+-..+++|++++.+.|..
T Consensus 376 ~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 376 AVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred CCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 23567888 45566788999999998864
No 429
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=1.7e-13 Score=160.21 Aligned_cols=293 Identities=14% Similarity=0.180 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHh-CCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC----------
Q 001990 634 FNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG---------- 701 (985)
Q Consensus 634 ~~el~~~la~l~-G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G---------- 701 (985)
..++.+++++++ +.+ ..++++||++++++++++++.| .++++||. ...+||.........|
T Consensus 92 ~~~la~~L~~~~~~~~-~v~~~~sGseA~e~Aik~a~~~------~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK00062 92 EVELAELVIELVPSIE-MVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPD 164 (426)
T ss_pred HHHHHHHHHHhCCCCC-EEEEecCHHHHHHHHHHHHHHH------hCCCeEEEEcCccCCchhhhhhccCccccccCCCC
Confidence 347888888876 344 3467899999999999888875 23456665 5568887543322211
Q ss_pred ---cE------EEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEc-CCCccccccC----HHHHHHHHHHcCCEEEEEc
Q 001990 702 ---MK------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY-PSTHGVYEEG----IDEICKIIHDNGGQVYMDG 767 (985)
Q Consensus 702 ---~~------v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~-pn~~G~i~~d----i~eI~~la~~~g~lliVD~ 767 (985)
.. +..+| ..|++++++.++++.+++++|+++. ++..|.+. + +++|.++|++||+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~-~~~~~l~~l~~l~~~~~~llI~DE 238 (426)
T PRK00062 165 SPGVPEDFAKHTLTAP-----YNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVP-PKPGFLEGLRELCDEHGALLIFDE 238 (426)
T ss_pred CCCCCcccccceEEcC-----CCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEee
Confidence 10 11122 1489999999976556888888873 45678776 5 8999999999999999999
Q ss_pred cccccc--cCCCCCCcCC--CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcc
Q 001990 768 ANMNAQ--VGLTSPGYIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (985)
Q Consensus 768 a~~~~~--~g~~~~g~~g--~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~ 843 (985)
+|. ++ +.......++ +|+++ +.|.|+ +|..+|++++++++.+.+... +. ....
T Consensus 239 v~~-G~r~g~~~~~~~~~~~pDi~~--~gK~l~-----~G~p~ga~~~~~~i~~~~~~~--~~-------------~~~~ 295 (426)
T PRK00062 239 VMT-GFRVALGGAQGYYGVTPDLTT--LGKIIG-----GGLPVGAFGGRREIMEQLAPL--GP-------------VYQA 295 (426)
T ss_pred chh-ccccCCccHHHHhCCCcchHh--hhhHhh-----CCCcceeeeEHHHHHHhhccC--CC-------------ceec
Confidence 984 33 1110011122 57643 357774 344467788888877665310 00 0000
Q ss_pred cccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccc----
Q 001990 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN---- 914 (985)
Q Consensus 844 s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~---- 914 (985)
+++.+++..++++.+.|..+..+. ..++..++.++++++|++. .... ..+. +... .+.++.+....
T Consensus 296 ~T~~~~p~~~aaa~a~L~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~-G~~~-~i~l~~~~~~~~~~~ 370 (426)
T PRK00062 296 GTLSGNPLAMAAGLATLKLLKEPG---FYEELEALTKRLAEGLKEAAKKAGIPLTVNRV-GSMF-GLFFTDEPVTNYADA 370 (426)
T ss_pred ccCcCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe-cceE-EEEEecCCCcchhhh
Confidence 111234455666777787775543 3455666777888877641 2221 2221 2222 22222110000
Q ss_pred cCC--CCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 915 TAG--IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 915 ~~g--~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
..+ .....+.+.|.++|+.+....+ +.++++ ..+|++||| +++++|+++++++
T Consensus 371 ~~~~~~~~~~i~~~l~~~Gv~v~~~~~---~~~~~~--~~~t~~ei~---~~~~~l~~~l~~~ 425 (426)
T PRK00062 371 KKSDTERFARFFHAMLDEGVYLAPSQF---EAGFVS--AAHTDEDIE---KTLEAARKAFAAL 425 (426)
T ss_pred ccccHHHHHHHHHHHHHCCeEeecCCc---Cceeee--ccCCHHHHH---HHHHHHHHHHHhh
Confidence 000 0135788899999999864432 345554 678999999 9999999887653
No 430
>PRK09265 aminotransferase AlaT; Validated
Probab=99.57 E-value=4.3e-13 Score=156.16 Aligned_cols=296 Identities=12% Similarity=0.035 Sum_probs=169.7
Q ss_pred HHHHHHHHHh------CCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeC
Q 001990 636 NLGEWLCTIT------GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (985)
Q Consensus 636 el~~~la~l~------G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~ 709 (985)
++++.+++.+ +++...+..++|++. +..++++.+. .++++|+++++.|..+...++..|.+++.+++
T Consensus 76 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~ 148 (404)
T PRK09265 76 SARKAIMQYYQQKGIPDVDVDDIYIGNGVSE--LIVMAMQALL-----NNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLC 148 (404)
T ss_pred HHHHHHHHHHhccCCCCCCcccEEEeCChHH--HHHHHHHHhC-----CCCCEEEEeCCCCcChHHHHHHcCCEEEEEec
Confidence 4555566655 555555555555542 2223333321 46789999999888777778888999998887
Q ss_pred CC--CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccc-cC--CCCCC
Q 001990 710 DA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPG 780 (985)
Q Consensus 710 ~~--~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~-~g--~~~~g 780 (985)
+. ++.+|+++++++++ +++++|++++| |++|.+. + +++|+++|+++|+++++|+++..-. .+ .....
T Consensus 149 ~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 224 (404)
T PRK09265 149 DEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIA 224 (404)
T ss_pred ccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHH
Confidence 64 35799999999987 78899999999 5799887 5 9999999999999999999874211 01 00111
Q ss_pred cC--CCcE-EEeCCcccccccCCCCCCcceeeeec--cc----ccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 781 YI--GADV-CHLNLHKTFCIPHGGGGPGMGPIGVK--KH----LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 781 ~~--g~Di-~~~s~hKtl~~p~g~GGPg~G~l~~~--~~----l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
.+ ...+ ++.|+.|+|+. .|.++|++++. +. +...+. ... ....+.+ ..++.
T Consensus 225 ~~~~~~~vi~~~S~SK~~~~----pGlRiG~~v~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~--~~~q~- 284 (404)
T PRK09265 225 SLAPDLLCVTFNGLSKAYRV----AGFRVGWMVLSGPKKHAKGYIEGLD--MLA-----------SMRLCAN--VPAQH- 284 (404)
T ss_pred HcCCCceEEEEecchhhccC----cccceEEEEEeCchHHHHHHHHHHH--HHh-----------ccccCCC--cHHHH-
Confidence 11 1123 45666787754 47789999863 22 211110 000 0001111 11121
Q ss_pred HHHHHHHHHHHhchhhHHHH---HHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH
Q 001990 852 ILPISYTYIAMMGSKGLTEA---SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~---~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~ 928 (985)
++.+++.. .+.+.+. .++..++.+++.+.|++...+.+..+.+..+ +.++++........+.+.+.+.|.
T Consensus 285 ---~~~~~l~~--~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~--l~~~~~~~~~~~~~~~~~~~~~l~ 357 (404)
T PRK09265 285 ---AIQTALGG--YQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALY--AFPKLDPKVYPIHDDEQFVLDLLL 357 (404)
T ss_pred ---HHHHHhcC--chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EEEEecccccCCCCHHHHHHHHHH
Confidence 11222211 1112221 2344556677778886521222222222222 233443100000012345677788
Q ss_pred HCCCccCCC-CC--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 929 DYGFHGPTM-SW--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 929 e~Gi~~~~~-~~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
++||.+... .| +-++.+|+++. .+.|+++ ..++.|++.++.
T Consensus 358 ~~gv~v~pg~~F~~~~~~~~Ri~~~--~~~e~l~---~~l~rl~~~l~~ 401 (404)
T PRK09265 358 QEKVLLVQGTGFNWPEPDHFRIVTL--PRVDDLE---EAIGRIGRFLSG 401 (404)
T ss_pred hCCEEEECchhhCCCCCCeEEEEeC--CCHHHHH---HHHHHHHHHHHH
Confidence 899986432 22 22578999984 5788888 888888877654
No 431
>PLN02509 cystathionine beta-lyase
Probab=99.57 E-value=3.7e-13 Score=157.00 Aligned_cols=217 Identities=19% Similarity=0.211 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~ 708 (985)
...+++++++++.|.+.+ +.+++|..+. +++..+ . +++|+||+++..|+.+... +...|++++.++
T Consensus 134 t~~aLE~~lA~leg~e~a-i~~~SG~aAi-~~il~l---l-----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd 203 (464)
T PLN02509 134 TRDALESLLAKLDKADRA-FCFTSGMAAL-SAVTHL---I-----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN 203 (464)
T ss_pred HHHHHHHHHHHHhCCCEE-EEeCcHHHHH-HHHHHH---h-----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeC
Confidence 467889999999987765 5566776544 322222 1 4788999998877765432 346799998887
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
. .|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|++++||+++..+.. ..+..+|+|++
T Consensus 204 ~-----~d~e~l~~ai~---~~TklV~lesPsNPtG~i~-Dl~~I~~lAk~~g~~lIVD~A~a~~~~--~~pl~~gaDiv 272 (464)
T PLN02509 204 T-----TNLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKIAEMAHAQGALVLVDNSIMSPVL--SRPLELGADIV 272 (464)
T ss_pred C-----CCHHHHHHhCC---cCCeEEEEECCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCcccccc--CChhhcCCcEE
Confidence 5 37999999997 78999999999 5799997 999999999999999999999864432 35566899999
Q ss_pred EeCCcccccccCCCCCCcceeeeeccc-ccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~-l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
++|++|+++.+ |+..+|+++++++ +...+. .. + ...+...+ + ..||..+ .|-+
T Consensus 273 v~S~tK~l~G~---gdv~gG~v~~~~~~l~~~~~--~~----------~-~~~g~~l~-p-------~~A~l~l--r~L~ 326 (464)
T PLN02509 273 MHSATKFIAGH---SDVMAGVLAVKGEKLAKEVY--FL----------Q-NSEGSGLA-P-------FDCWLCL--RGIK 326 (464)
T ss_pred EecCcccccCC---CccceeEEEeccHHHHHHHH--HH----------H-HhcCCCcC-H-------HHHHHHH--hhhh
Confidence 99999998522 2334788887643 222111 00 0 00001000 1 1133333 3334
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC---CeeEcC
Q 001990 867 GLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~~~---~i~~~g 896 (985)
-+..+.++..+++.++.+.|++.. .+.+++
T Consensus 327 tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPg 359 (464)
T PLN02509 327 TMALRIEKQQENARKIAMYLSSHPRVKKVYYAG 359 (464)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 556677888899999999998632 344554
No 432
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.57 E-value=5.4e-13 Score=154.74 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=177.8
Q ss_pred hcHHHHHHHHHHHHHHHhCC--Cccce-ecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGF--DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~--~~~~~-~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
.|..++...+.+++...++. +...+ +.++++++...+ ++.+. .+++.|+++++.+..+...++..|+++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~---~~~l~-----~~gd~Vli~~p~~~~~~~~~~~~g~~v 144 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA---LKAIL-----NPGDEVIVFAPYFVEYRFYVDNHGGKL 144 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH---HHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 45545444455555444333 34344 444444444222 33221 367889999988777777778899999
Q ss_pred EEEeCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHH------cCCEEEEEccccccc-
Q 001990 705 VSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHD------NGGQVYMDGANMNAQ- 773 (985)
Q Consensus 705 ~~v~~~~~-g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~------~g~lliVD~a~~~~~- 773 (985)
+.++.+++ +.+|+++++++++ +++++|++++| |++|.+.+ .+++|+++|++ ||+++++|+++..-.
T Consensus 145 ~~v~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~ 221 (394)
T PRK06836 145 VVVPTDTDTFQPDLDALEAAIT---PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY 221 (394)
T ss_pred EEEecCCccCcCCHHHHHhhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc
Confidence 99999766 6899999999997 78999999998 57999862 47888888998 899999999874211
Q ss_pred cC--CCC-CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCc---CCCCccccCCCCCCCCCCCCCCCcccccc
Q 001990 774 VG--LTS-PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF---LPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (985)
Q Consensus 774 ~g--~~~-~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~---lpg~~~g~~~~~~~~~~~~~t~~i~s~~~ 847 (985)
.+ ... ...++-.+++.|++|.|+.| |.++|++++++.+.+. +...... .......+.+
T Consensus 222 ~~~~~~~~~~~~~~~i~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-- 285 (394)
T PRK06836 222 DGAEVPYIFKYYDNSIVVYSFSKSLSLP----GERIGYIAVNPEMEDADDLVAALVFA----------NRILGFVNAP-- 285 (394)
T ss_pred CCCCCCChHHccCcEEEEecchhhccCc----ceeeEEEecCHHHhhhHHHHHHHHHH----------hhccccccCC--
Confidence 11 000 11222357778888888543 5679999998655321 1000000 0000001111
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHH
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~ 926 (985)
.. ...+. ...+.. +. ..+...++.+.+.+.|++ ++.+. .+.+.++ +.+.++ ..+..++++.
T Consensus 286 --~~-~q~~~--~~~l~~-~~--~~~~~~~~r~~l~~~L~~~g~~~~--~~~gg~~--~~~~~~------~~~~~~~~~~ 347 (394)
T PRK06836 286 --AL-MQRVV--AKCLDA-TV--DVSIYKRNRDLLYDGLTELGFECV--KPQGAFY--LFPKSP------EEDDVAFCEK 347 (394)
T ss_pred --HH-HHHHH--HHHhCC-hH--HHHHHHHHHHHHHHHHHhCCCEee--cCCceEE--EEEeCC------CCCHHHHHHH
Confidence 11 11111 122222 21 123344566777788876 43322 2212111 223333 1367788889
Q ss_pred HHHCCCccCCC-CCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 927 LMDYGFHGPTM-SWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 927 L~e~Gi~~~~~-~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
|.++||.+... .|..++++||+++ .++++++ ..++.|++++++.
T Consensus 348 l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~---~~i~~l~~~l~~~ 392 (394)
T PRK06836 348 AKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIE---RSLPAFEKLAKEY 392 (394)
T ss_pred HHhCCEEEECchhcCCCCeEEEEec--CCHHHHH---HHHHHHHHHHHHh
Confidence 99999986432 2333588999997 4788888 8888888887654
No 433
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.57 E-value=8.2e-13 Score=153.72 Aligned_cols=306 Identities=11% Similarity=0.105 Sum_probs=182.7
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--cc-ceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~--~~-~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
.+|...+...+.+++.+.+|.+ .. .+..++|++ |. .++++.+. .+++.|+++++.+..+...++..|.
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al---~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 141 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGY---VHLVQAIT-----NPGDVAIVPDPAYPIHSQAFILAGG 141 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHH---HHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 4687777777777777777753 33 455555554 33 23333321 4678999999988777777889999
Q ss_pred EEEEEeCC--CCCCCCHHHH----HHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc
Q 001990 703 KIVSVGTD--AKGNINIEEL----RKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 703 ~v~~v~~~--~~g~iDle~L----~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
+++.+|.+ ++..+|++++ +++++++.+++++|++++| |++|.+- ..+++|.++|++|++++++|.++..-.
T Consensus 142 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~ 221 (403)
T PRK08636 142 NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADIT 221 (403)
T ss_pred EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhc
Confidence 99999874 3357888754 5666544468899999998 6799886 247899999999999999999874211
Q ss_pred -cCC--CCCCcC--CCc--EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCccccc
Q 001990 774 -VGL--TSPGYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (985)
Q Consensus 774 -~g~--~~~g~~--g~D--i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~ 846 (985)
.+. .....+ ..| +.+.|+.|+|+. .|.++|+++.+++++..+.... .. .. .+.++ +
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~GlRiG~iv~~~~li~~~~~~~-~~----------~~-~~~~~-~ 284 (403)
T PRK08636 222 FDGYKTPSILEVEGAKDVAVESYTLSKSYNM----AGWRVGFVVGNKKLVGALKKIK-SW----------LD-YGMFT-P 284 (403)
T ss_pred cCCCCCCChhcCCCccccEEEEEecccccCC----ccceeeeeeCCHHHHHHHHHHH-HH----------hc-ccCCh-H
Confidence 111 111111 113 346778888854 4789999998877665432110 00 00 01111 0
Q ss_pred chhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHH
Q 001990 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (985)
Q Consensus 847 ~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~ 925 (985)
.+. . +..++. -..+-+++..+...++.+.+.+.|++ ++.+. .+.+..+ +.++++.. ..+.+..++++
T Consensus 285 -~q~---~-~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~g~~--~~~~l~~~--~~~~~~~~l~~ 352 (403)
T PRK08636 285 -IQV---A-ATIALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ--KPRASMF--VWAKIPEP--ARHLGSLEFSK 352 (403)
T ss_pred -HHH---H-HHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCcceE--EEEECCCc--cCCCCHHHHHH
Confidence 011 1 111221 11233444455556677788888876 33322 2212222 34555310 00234677887
Q ss_pred HHH-HCCCccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 926 RLM-DYGFHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 926 ~L~-e~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.|. ++||.+... .|. ..+.+||++. .+.++++ +.++.|+++++.
T Consensus 353 ~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~---~~~~rl~~~l~~ 400 (403)
T PRK08636 353 QLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIR---QAARNIKKFLKE 400 (403)
T ss_pred HHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHH---HHHHHHHHHHHh
Confidence 755 679986432 232 2478999986 4667777 777777666654
No 434
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=2.8e-13 Score=144.45 Aligned_cols=347 Identities=18% Similarity=0.180 Sum_probs=206.9
Q ss_pred HhcCccCcCcccccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCCc----cceecC
Q 001990 580 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPN 655 (985)
Q Consensus 580 l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~~----~~~~~~ 655 (985)
++++|..-...|-.||||-+ |.+.|-.|-.+ ||--. | =.-++..-+++..-+.||+++ +++++.
T Consensus 46 IaSENFts~aVmeAlGS~lt--NKYSEGyPG~R-----YYGGn--e---~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~ 113 (477)
T KOG2467|consen 46 IASENFTSRAVMEALGSCLT--NKYSEGYPGAR-----YYGGN--E---YIDQIELLCQKRALEAFGLDPEKWGVNVQPY 113 (477)
T ss_pred eecccchHHHHHHHHhHHhh--cccccCCCccc-----ccCcc--h---HHHHHHHHHHHHHHHHhCCCHHHCceeeccC
Confidence 45566543344456787644 66666666332 22111 1 011222224566667899987 479999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC---CcHHHHHhcC-------cEEEEEeCC-CCCCCCHHHHHHHH
Q 001990 656 AGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG---TNPATAAMCG-------MKIVSVGTD-AKGNINIEELRKAA 724 (985)
Q Consensus 656 sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg---~~~~~~~~~G-------~~v~~v~~~-~~g~iDle~L~~~i 724 (985)
||+-+++++..++. .++++|.--+.-|| +|.-...... ++-....+| ..|-||.|.|++..
T Consensus 114 SGSPANfavYtall--------~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A 185 (477)
T KOG2467|consen 114 SGSPANFAVYTALL--------KPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTA 185 (477)
T ss_pred CCCchhhHHHhhhc--------CCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHH
Confidence 99999988877765 46777775443333 3321111111 111122334 34999999999877
Q ss_pred HhcCCCeEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEcccccccc---CCCCCCcCCCcEEEeCCcccccccCCC
Q 001990 725 EANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---GLTSPGYIGADVCHLNLHKTFCIPHGG 801 (985)
Q Consensus 725 ~~~~~~t~~Vvi~~pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~---g~~~~g~~g~Di~~~s~hKtl~~p~g~ 801 (985)
... +.++|+.....+.-.+ |.+.+.++|.+.|+.+++|-||..++. .+.+|-+ .+||++.+.||+|
T Consensus 186 ~~f--rPk~iiaG~SaY~R~~--DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe-y~DiVTTTTHKsL------ 254 (477)
T KOG2467|consen 186 TLF--RPKLIIAGTSAYSRLI--DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE-YCDIVTTTTHKSL------ 254 (477)
T ss_pred Hhc--CCcEEEeccccchhhc--cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc-ccceeeccccccc------
Confidence 644 3444544333344444 699999999999999999999954442 2344544 4899999999998
Q ss_pred CCCcceeeeecccccCcCCCC--ccccC-CCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHH
Q 001990 802 GGPGMGPIGVKKHLAPFLPSH--PVVST-GGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (985)
Q Consensus 802 GGPg~G~l~~~~~l~~~lpg~--~~g~~-~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~ 878 (985)
.||++|+|..|+.+...-++. -+... .+.+.. .-.+...+.|... .+++.|. +|..-....+++..++..+|
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINf---aVFP~lQGGPHNh-tIaalAv-ALkQa~tpefk~Yq~qV~~N 329 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINF---AVFPGLQGGPHNH-TIAALAV-ALKQAMTPEFKEYQKQVLKN 329 (477)
T ss_pred cCCcceeEEEeccCCcCCCCCCCcceechhhhhhh---hccccccCCCCcc-hHHHHHH-HHHhhCCHHHHHHHHHHHHH
Confidence 799999999987544322211 00000 000000 0111111112212 1222222 34444455688999999999
Q ss_pred HHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCC--C----CCCCCCEEEEeccC
Q 001990 879 ANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT--M----SWPVPGTLMIEPTE 951 (985)
Q Consensus 879 a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~--~----~~pv~~~lris~t~ 951 (985)
++.|.+.|.+ ++.++..| ...|.+.+|+++ .|+++..+-+.|..-+|.++. + +.-.|+.||+--..
T Consensus 330 akala~~l~~~Gy~lvtgG---TDnHlvLvDLr~----~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPA 402 (477)
T KOG2467|consen 330 AKALASALISRGYKLVTGG---TDNHLVLVDLRP----KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPA 402 (477)
T ss_pred HHHHHHHHHHcCceEecCC---ccceEEEEeccc----cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchh
Confidence 9999999987 88887654 345678889874 588888877777777776542 1 11146889987555
Q ss_pred CCC----HHhhchHHHHHHHHHHHH
Q 001990 952 SES----KVCHNREDLFFQILLSLT 972 (985)
Q Consensus 952 ~~t----~eeId~~~~~i~aL~~i~ 972 (985)
.+| ++|.+ +..+-|.+.+
T Consensus 403 mTsRG~~e~df~---~v~~fi~~av 424 (477)
T KOG2467|consen 403 MTSRGFGEEDFE---KVADFIDRAV 424 (477)
T ss_pred hcccCccHHHHH---HHHHHHHHHH
Confidence 443 56776 5555555444
No 435
>PRK06148 hypothetical protein; Provisional
Probab=99.57 E-value=4.2e-13 Score=171.03 Aligned_cols=327 Identities=16% Similarity=0.183 Sum_probs=198.1
Q ss_pred ccccceecccCccccccccccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHH
Q 001990 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (985)
Q Consensus 592 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~ 670 (985)
..+|++.+.+......+.... .+.+.++ . +...++.+.|++++..+ ...++.|||+++++++++.+|.
T Consensus 634 ~~lGH~hp~v~~Ai~~q~~~l-~~~~~~~-~---------~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~ 702 (1013)
T PRK06148 634 CHVGHAHPRVVAAAARQAARL-NTNTRYL-H---------DAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARA 702 (1013)
T ss_pred hhcCCCCHHHHHHHHHHHhhc-CCcCCcC-C---------HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 457888776665544433111 1111111 1 23457888888887532 2347889999999999998887
Q ss_pred HHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcC------------cEEEEEeCCCC-----CCCC-------HHHHHHHHH
Q 001990 671 YHKARGDHHRNVCII-PVSAHGTNPATAAMCG------------MKIVSVGTDAK-----GNIN-------IEELRKAAE 725 (985)
Q Consensus 671 ~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G------------~~v~~v~~~~~-----g~iD-------le~L~~~i~ 725 (985)
| +++.+||+ ...+||....+....| -.+..++.... +..| .+++++.++
T Consensus 703 ~------tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 703 H------TGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred h------cCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 6 24455664 6688997654432211 01212221100 0011 245666554
Q ss_pred ---hcCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCCc-------C--CCcEEEe
Q 001990 726 ---ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-------I--GADVCHL 789 (985)
Q Consensus 726 ---~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~-------~--g~Di~~~ 789 (985)
.+++++++|+++.. ...|.+.+ -++++.++|+++|+++|+|++| .|+.+.|. + -+|++++
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVq----tGfGRtG~~~~a~e~~gv~PDivt~ 852 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQ----VGFGRVGSHWWAFETQGVVPDIVTM 852 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecc----cCCCCCCCcchhhhhcCCCcceeee
Confidence 23457888887643 34576652 2999999999999999999987 33334432 1 2799876
Q ss_pred CCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHH
Q 001990 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (985)
Q Consensus 790 s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~ 869 (985)
.|.+ |+|-| +|.+++++++++.+.... . ..+++.|+++.++++.+.|..+.++++.
T Consensus 853 --gK~l----ggG~P-lgav~~~~ei~~~~~~g~----------------~-~~~Tf~gnpla~aaa~a~L~~i~~e~l~ 908 (1013)
T PRK06148 853 --GKPI----GNGHP-MGAVVTTREIADSFDNGM----------------E-YFNTFGGNPVSCAIGLAVLDIIEDEDLQ 908 (1013)
T ss_pred --cccc----cCCcc-eEEEEEcHHHHhhccCCC----------------c-cccCCCCCHHHHHHHHHHHHHHhhccHH
Confidence 3766 44444 677778887776543210 0 0123556777888888899988776544
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEEecCccccCCC----CHHHHHHHHHHCCCccCCCCCC
Q 001990 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI----EPEDVAKRLMDYGFHGPTMSWP 940 (985)
Q Consensus 870 ~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~~~~~~~~~g~----~~~~l~~~L~e~Gi~~~~~~~p 940 (985)
++..+..++|+++|++. +.++ +.|. +. + +-+.+..- ..... ....+.+.|.++||++.... |
T Consensus 909 ---~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Gl-~--~gvel~~~-~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~ 979 (1013)
T PRK06148 909 ---RNALEIGNYLLAGLRELQDRFDIIGDVRGM-GL-F--LGIELVTD-RKTKAPATAIARYVKNGARERGILIGTEG-P 979 (1013)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCceEEeee-ce-E--EEEEecCC-ccccCccHHHHHHHHHHHHhCCeEEeccC-C
Confidence 45667778888888752 2321 1121 11 1 12222100 00011 13467888899999985432 2
Q ss_pred CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 941 VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 941 v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
..+.||+.|+..+|++||| +++++|.+++.++
T Consensus 980 ~~~vlr~~Ppl~it~~~id---~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 980 HDNVLKIRPPLIFSRADAD---HLLEVLDDVLAAA 1011 (1013)
T ss_pred CCCEEEEeCCccCCHHHHH---HHHHHHHHHHHHH
Confidence 2588999999999999999 9999999988764
No 436
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.57 E-value=1.4e-13 Score=158.57 Aligned_cols=280 Identities=14% Similarity=0.144 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..+.|+|+..|+++|++.+.+ +++|.|++..++.+++. . +||+||+++++|.|+...+-. .|...+++.+
T Consensus 70 G~i~eAqe~aA~~fgAd~tyF-vvNGTS~ank~vi~a~~-~--~GD~VLvdRN~HKSi~~glil----aGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYF-VVNGTSTANKAVINAVL-T--PGDKVLVDRNCHKSIHHGLIL----AGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEE-EECCccHHHHHHHHhhc-C--CCCEEEecCCccHHHHHHHHH----cCCceEEecCCC
Confidence 357889999999999998766 67888888888888763 3 899999999999999988632 4667766633
Q ss_pred ------------hhhhc--c-CCCE-eEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE-eccccc---cCCCC-CCcc
Q 001990 289 ------------KDIDY--K-SGDV-CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLAL---TILKP-PGEL 347 (985)
Q Consensus 289 ------------~~l~~--l-~~~t-~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~-a~~~al---g~l~~-p~~~ 347 (985)
+.+++ + .++. +++++|+|+|+|++.|+++|.+.+|..++++.|+ +++.-. +.+.. ..+.
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 23433 2 3456 8999999999999999999999999999999993 332222 22222 2448
Q ss_pred cceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHH
Q 001990 348 GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (985)
Q Consensus 348 GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~ 427 (985)
|+|+++.|.++....+ -++.++++++. +.+.- ++ -+..|.+ .-|+++.|
T Consensus 222 ~~~~~tqS~HK~l~al----SQaS~iHv~~~--~~~~~-------~r-~nea~~~-----------------h~STSPsY 270 (557)
T COG1982 222 GADFVTQSTHKLLAAL----SQASMIHVKDG--RAVNH-------ER-FNEALMM-----------------HQSTSPSY 270 (557)
T ss_pred CceEEEechhhhhhhh----hhhHHHhhCCC--ccCCH-------HH-HHHHHHH-----------------HccCCchH
Confidence 9999999994443222 24566666543 11110 00 0011111 12346777
Q ss_pred HHHHHHHH--HHcCcchH---HHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-------------------Ccce--EEEe
Q 001990 428 ANMAAMYA--VYHGPEGL---KTIAQRVHGLAGTFALGLKKLGTVEVQGLP-------------------FFDT--VKVK 481 (985)
Q Consensus 428 a~~aa~y~--~~~g~~Gl---~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-------------------~~~~--~~i~ 481 (985)
.++|++-. .+.+..|- ++..+...+..+++++..+++++|.++.+. .+|+ +++.
T Consensus 271 ~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~ 350 (557)
T COG1982 271 PLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTIT 350 (557)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEe
Confidence 78887732 23344443 223566667778888888887658876432 1243 5566
Q ss_pred cCC----HHHHHHHHHHcCceeeeecC--CeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 482 CAD----AHAIASAAYKIEMNLRVVDS--NTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 482 ~~~----~~~l~~~L~~~Gi~~~~~~~--~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+++ +..+.+.|+++||....... ..+.+++.+..+..+++.|++.+..
T Consensus 351 tp~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 351 TPEFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKRR 404 (557)
T ss_pred cCCCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHHh
Confidence 543 88999999999998876654 4456666666788888999888874
No 437
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.57 E-value=3.4e-13 Score=154.87 Aligned_cols=208 Identities=18% Similarity=0.168 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.++||+.+..+++ ++ . .++++||+++..|+... ..+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g~~~a-l~~~SG~~Al~~~l-~~---l-----~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEGGVKG-FAFASGLAGIHAVF-SL---F-----QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhCCCCE-EEECCHHHHHHHHH-HH---c-----CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 56789999999998775 56677876653322 21 1 36789999887554332 224567999988875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++.... ...|..+|+|+++
T Consensus 122 ~-----d~e~l~~ai~---~~t~lV~lesP~Nptg~~~-di~~I~~la~~~gi~vivD~t~a~~~--~~~p~~~gaDivv 190 (380)
T PRK06176 122 S-----DLSQIKKAIK---PNTKALYLETPSNPLLKIT-DLAQCASVAKDHGLLTIVDNTFATPY--YQNPLLLGADIVV 190 (380)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEECCccccc--cCCccccCCCEEE
Confidence 3 8999999997 78999999999 5799998 89999999999999999999986432 3356678999999
Q ss_pred eCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+|++|+++.| +...+|++++++ ++...+.. . + ...+...+ ...+| +...|-+.
T Consensus 191 ~S~tK~l~g~---~d~~gG~vv~~~~~~~~~~~~--~----------~-~~~G~~~~--------~~~~~--l~~~gl~t 244 (380)
T PRK06176 191 HSGTKYLGGH---SDVVAGLVTTNNEALAQEIAF--F----------Q-NAIGGVLG--------PQDSW--LLQRGIKT 244 (380)
T ss_pred ecCceeccCC---ccceeeEEEecHHHHHHHHHH--H----------H-HHhcCCCC--------HHHHH--HHHhccCc
Confidence 9999998532 112367777753 44332210 0 0 00011110 11233 33345556
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+..+.++..+++..+.+.|++
T Consensus 245 l~~R~~~~~~~a~~la~~L~~ 265 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEK 265 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 666777778888888888876
No 438
>PRK06460 hypothetical protein; Provisional
Probab=99.57 E-value=7.1e-13 Score=152.25 Aligned_cols=209 Identities=15% Similarity=0.136 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-CcH---HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg-~~~---~~~~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.+ +.+++|..++.+++.++ . .++|+||++.+.++ ++. ..++..|++++.++.
T Consensus 47 ~~~L~~~lA~l~g~~~~-v~~~sG~~ai~~~l~al---~-----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 47 VLELTKKIVELENAEMG-VAFSSGMGAISTTALAL---L-----KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 56889999999999765 44567766554333332 1 46789999876543 332 335678999988876
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |.+.++++++ +++++|++++| |++|.+. |+++|+++|+++|+++++|+++.... ...+..+++|+++
T Consensus 118 ~-----~~~~l~~~~~---~~tklV~l~sp~NPtG~v~-d~~~I~~la~~~g~~vivDea~~~~~--~~~~l~~~~divv 186 (376)
T PRK06460 118 G-----SDNIIEKAKS---KRYDVVFVENITNPLLRVV-DITELSKVCKENGSILIVDATFSTPI--NQKPLELGADIVV 186 (376)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcCccc--cCChhhcCCCEEE
Confidence 4 3344555544 78999999999 5799998 89999999999999999999985332 1233356799999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|+||+|+ |.++..+|+++.++++.+.+.... ... +++. .+ ..||.. ..+.+.+
T Consensus 187 ~S~sK~l~---G~~~~~~G~~~~~~~l~~~l~~~~-----------~~~---g~~~----~~---~~a~~~--l~~~~~l 240 (376)
T PRK06460 187 HSASKFLA---GHNDVIAGLAAGYGKLLNVIDQMR-----------RTL---GTSL----DP---HAAYLT--LRGIKTL 240 (376)
T ss_pred eecceecc---CCCCceEEEEecCHHHHHHHHHHH-----------Hhc---CCCC----CH---HHHHHH--HhchhhH
Confidence 99999984 222345888888877655432100 000 1111 11 123332 3344556
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 001990 869 TEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~ 888 (985)
....++..++++++.+.|++
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~ 260 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEG 260 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 77778888999999999986
No 439
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.56 E-value=5.5e-13 Score=152.37 Aligned_cols=282 Identities=13% Similarity=0.111 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC-
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~- 712 (985)
..++++.++++++.+..++.+++|++. +...+++.+ .+ +.|+++++.++.+...++..|++++.++.+.+
T Consensus 56 ~~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~~------~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~ 126 (354)
T PRK06358 56 YLELRKRIASFEQLDLENVILGNGATE--LIFNIVKVT------KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEET 126 (354)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHH--HHHHHHHHh------CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCcccc
Confidence 347888999999988877666666652 222333322 13 46889888776666667889999999998654
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cCC-CCC----CcC
Q 001990 713 -GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSP----GYI 782 (985)
Q Consensus 713 -g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g~-~~~----g~~ 782 (985)
..+| +++.+.+. +++++|++++| |++|.+-+ .+++|.++|+++|+++++|+++..-. .+. ..+ ...
T Consensus 127 ~~~~d-~~~~~~~~---~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 202 (354)
T PRK06358 127 NFAAN-EIVLEEIK---EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENF 202 (354)
T ss_pred CCCcc-HHHHHhhc---cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCC
Confidence 3688 66666665 56888889999 57998862 48899999999999999999874211 110 000 011
Q ss_pred CCcEEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHH
Q 001990 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (985)
Q Consensus 783 g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~ 861 (985)
.-=+++.|+.|+|++ .|.++|++++. +.+...+... . ...++++ ..-.++..
T Consensus 203 ~~vi~~~S~SK~~gl----~G~RiG~lv~~~~~~~~~~~~~------------~--~~~~~~~------~~q~~~~~--- 255 (354)
T PRK06358 203 KNLIIIRAFTKFFAI----PGLRLGYGLTSNKNLAEKLLQM------------R--EPWSINT------FADLAGQT--- 255 (354)
T ss_pred CCEEEEEechhhccC----cchhheeeecCCHHHHHHHHHh------------C--CCCcchH------HHHHHHHH---
Confidence 111556777777754 47899999875 4554333110 0 0001110 00111112
Q ss_pred Hhchhh-HHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CC
Q 001990 862 MMGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW 939 (985)
Q Consensus 862 ~lg~~g-l~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~ 939 (985)
.+..+. +.+..+...++.+++.+.|++...+.+..+.+. .+.+.++ +..++.+.|.++||.+... .|
T Consensus 256 ~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~---f~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f 324 (354)
T PRK06358 256 LLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN---FIFFKLE--------KPIDLRKELLKKGILIRSCSNY 324 (354)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce---EEEEEcC--------chHHHHHHHHHCCeEEEECCCC
Confidence 222222 244455556777888888876322222222222 2334543 2478999999999987433 23
Q ss_pred C--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 940 P--VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 940 p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
+ .++++|+++ .++++.+ +|+++|++++
T Consensus 325 ~~~~~~~iRls~---~~~~~~~---~l~~~l~~~~ 353 (354)
T PRK06358 325 RGLDENYYRVAV---KSREDNK---KLLKALEVIL 353 (354)
T ss_pred CCCCCCEEEEEe---CCHHHHH---HHHHHHHHHh
Confidence 2 246899997 7889999 9999998764
No 440
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.56 E-value=1.2e-12 Score=150.29 Aligned_cols=265 Identities=14% Similarity=0.084 Sum_probs=176.1
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc-----
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~----- 288 (985)
.++++.+|+++|.++.++.+++|++.++..++.++ .. +||+|++++..|+.+...+ +..|.+++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~~--~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-LG--PGDEVIYSEHGFAVYPIAA----QAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-cC--CCCEEEEecCCHHHHHHHH----HHcCCeEEEecccCCCC
Confidence 46778999999998888988888887766555444 22 7899999998887665544 346888887754
Q ss_pred --hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccccccCCC---CC----Ccccce-EEEe
Q 001990 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILK---PP----GELGAD-IVVG 354 (985)
Q Consensus 289 --~~l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~--galliV~a~~~alg~l~---~p----~~~GaD-i~v~ 354 (985)
+++++ +++++++|++.+| |++|.+.|.+++.++++.. |+++++|. ........ .+ .+.+-+ ++++
T Consensus 143 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 143 DLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDE-AYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred CHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEEC-cHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 34555 6778999999998 6899999999999999875 88988842 22211110 00 011223 4555
Q ss_pred cC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001990 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (985)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~ 433 (985)
|. |.|+. +|..+||+++++++++.+.. .+.+.++++ . +..++.
T Consensus 222 S~SK~~g~----~G~RiG~l~~~~~~~~~l~~----------------------------~~~~~~~~~--~--~~~~a~ 265 (367)
T PRK02731 222 TFSKAYGL----AGLRVGYGIAPPEIIDALNR----------------------------VRQPFNVNS--L--ALAAAV 265 (367)
T ss_pred eehHhhcC----cccceeeeeCCHHHHHHHHH----------------------------ccCCCCCCH--H--HHHHHH
Confidence 65 77653 23456999999887766510 000111211 1 112222
Q ss_pred HHHHcC-cchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecC--C-HHHHHHHHHHcCceeeeec----CC
Q 001990 434 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVVD----SN 505 (985)
Q Consensus 434 y~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~--~-~~~l~~~L~~~Gi~~~~~~----~~ 505 (985)
.++. .+-++++.++..++.+++.+.|++.| +++.. +...-+.+..+ . +.++.++|.++||.+.... ++
T Consensus 266 --~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 266 --AALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIP-SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred --HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCC-CCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 2222 23357777788888899999999886 76653 11222445553 2 7899999999999886532 46
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 001990 506 TVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 506 ~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+|+|++ +.+|+++++++|+.
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHH
Confidence 8999985 78999999999974
No 441
>PRK08175 aminotransferase; Validated
Probab=99.56 E-value=1.1e-12 Score=152.17 Aligned_cols=309 Identities=13% Similarity=0.124 Sum_probs=180.9
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--cc-ceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~--~~-~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
.+|..++.+.+.+++.+.+|.. .. ++..++|++ |.. ++++.+. .++++|+++++.|..+...++..|+
T Consensus 66 ~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 137 (395)
T PRK08175 66 SRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA---HLMLATL-----DHGDTVLVPNPSYPIHIYGAVIAGA 137 (395)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 3676666666666666665653 33 455555554 332 2222221 4678999999888777777788999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccc-cCC-
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VGL- 776 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~-~g~- 776 (985)
+++.++.++++ .++++++++++.+.+++++|++++| |++|.+- + +++|+++|+++|+++++|+++..-. .+.
T Consensus 138 ~~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~ 215 (395)
T PRK08175 138 QVRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWK 215 (395)
T ss_pred eEEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCC
Confidence 99999987543 3589999988754457899999988 5799886 4 4899999999999999999874211 110
Q ss_pred -CC----CCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q 001990 777 -TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (985)
Q Consensus 777 -~~----~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~ 851 (985)
.. ++..+..+.+.|+.|.|+. .|.++|+++.++++++.+.... .....+.+ ..
T Consensus 216 ~~~~~~~~~~~~~~i~~~S~SK~~g~----pGlRiG~~~~~~~l~~~~~~~~--------------~~~~~~~~----~~ 273 (395)
T PRK08175 216 APSIMQVPGAKDVAVEFFTLSKSYNM----AGWRIGFMVGNPELVSALARIK--------------SYHDYGTF----TP 273 (395)
T ss_pred CcchhcCCCcccCEEEEeeccccccC----cchhheeeeCCHHHHHHHHHHH--------------hhcccCCC----cH
Confidence 00 1111223567888888854 3678999998877765442100 00011110 01
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-H
Q 001990 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (985)
Q Consensus 852 ~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e 929 (985)
...++...+.. ..+-+++..+...++.+++.+.|++ ++.+. .+.+. ..+.++++.. ....+..+++.+|. +
T Consensus 274 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--~p~~g--~~i~i~l~~~--~~~~~~~~~~~~l~~~ 346 (395)
T PRK08175 274 LQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVE--MPKAS--MYVWAKIPEP--YAAMGSLEFAKKLLNE 346 (395)
T ss_pred HHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccc--CCCEE--EEEEEECCcc--cCCCCHHHHHHHHHHh
Confidence 11111222221 2223444455566777888888877 33321 12111 1234555410 00124678888765 6
Q ss_pred CCCccCCC-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHccCCC
Q 001990 930 YGFHGPTM-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFAGRVG 982 (985)
Q Consensus 930 ~Gi~~~~~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~~~~~ 982 (985)
+||.+... .|+ -++.+|+++. .+++.+. ++|+.+.+.+.+.++++
T Consensus 347 ~gv~v~p~~~f~~~~~~~lRis~~--~~~~~~~------~al~~l~~~l~~~~~~~ 394 (395)
T PRK08175 347 AKVCVSPGIGFGDYGDTHVRFALI--ENRDRIR------QAIRGIKAMFRADGLLP 394 (395)
T ss_pred CCEEEeCchhhCcCCCCeEEEEeC--CCHHHHH------HHHHHHHHHHHhcCCCC
Confidence 79987432 222 2468999885 3444444 55555555555555554
No 442
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=5.1e-13 Score=152.86 Aligned_cols=211 Identities=17% Similarity=0.109 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~ 708 (985)
..+.+++.++.+-|.+.. +.+.||..|+.++++++. .++|+||+++..|+.+.. .++..|+++++++
T Consensus 65 t~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 65 TTDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 456788999999876654 556667766644444332 478999999887765543 2467899999986
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
.+ +.+.++++++ ++|++|++++| |+++.+. ||++|+++||++|++++||+++.. ..+.+|-++|+|++
T Consensus 136 ~~-----~~e~l~~al~---~~TklV~lesPsNP~l~v~-dl~~I~~la~~~g~~vvVD~t~a~--p~~~~pl~~GaDiv 204 (395)
T PRK05967 136 PE-----IGAGIAKLMR---PNTKVVHTEAPGSNTFEMQ-DIPAIAEAAHRHGAIVMMDNTWAT--PLYFRPLDFGVDIS 204 (395)
T ss_pred CC-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHhCCEEEEECCccC--ceecChhHcCCCEE
Confidence 53 4688999997 78999999998 5788887 899999999999999999998753 23457888999999
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+.|..|+++ |.|.--+|+++.++++.+.+.. .. ..++...+ ...|| +...|-+.
T Consensus 205 v~S~tKy~~---Gh~d~~~G~v~~~~~~~~~l~~-~~------------~~~G~~~~--------p~da~--l~~rgl~T 258 (395)
T PRK05967 205 IHAATKYPS---GHSDILLGTVSANEKCWPQLLE-AH------------GTLGLCAG--------PDDTY--QILRGLRT 258 (395)
T ss_pred EEecccccC---CCCCeeEEEEEcCHHHHHHHHH-HH------------HHcCCCCC--------HHHHH--HHHcCccc
Confidence 999999874 2122246666666554332210 00 00111111 11234 45556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001990 868 LTEASKIAILNANYMAKRLEKH 889 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~ 889 (985)
+.-++++..+++..+++.|++.
T Consensus 259 l~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 259 MGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 7778888999999999999873
No 443
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.56 E-value=6.2e-13 Score=153.23 Aligned_cols=288 Identities=15% Similarity=0.145 Sum_probs=186.0
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc----
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---- 288 (985)
..++++.+|+++|.+. +..+.+||+++..++.++... +||+||++...|+++...+. ..|++++.+|.
T Consensus 35 ~~~le~~la~~~g~~~--~v~~~sgt~al~lal~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQH--AIAVSSATAGMHITLMALGIG--PGDEVITPSLTWVSTLNMIV----LLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCCC--CCCEEEECCCcHHHHHHHHH----HcCCEEEEEecCCCc
Confidence 4568899999999874 667899998888877766433 88999999999999987764 35888888754
Q ss_pred -----hhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC---CCCcccceEEEecC-cc
Q 001990 289 -----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-QR 358 (985)
Q Consensus 289 -----~~l~~-l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~---~p~~~GaDi~v~s~-k~ 358 (985)
+++++ ++++|++|+..++ +|...|+++|.++|+++|+++++|+ ..++|... ..+.+|+|+..++. |.
T Consensus 107 ~~~d~~~l~~~i~~~tkav~~~~~--~G~~~d~~~i~~~a~~~gi~vi~D~-a~a~g~~~~~~~~g~~g~~~~Sf~~~K~ 183 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAIIPVHY--AGAPADLDAIRAIGERYGIPVIEDA-AHAVGTYYKGRHIGARGTAIFSFHAIKN 183 (379)
T ss_pred CCcCHHHHHHhcccCCeEEEEeCC--CCCcCCHHHHHHHHHHcCCeEEEEC-CCccCCeECCeecCCCCCEEEeCCCCCc
Confidence 34555 7788999886664 8999999999999999999999952 44555432 35778888777776 76
Q ss_pred ccccCCCCCCceEEEEEc-hhhHhcCCC-ceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001990 359 FGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (985)
Q Consensus 359 lg~P~~~GGP~~G~l~~~-~~~~~~lp~-~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~ 436 (985)
+.+ | ..|++.++ +++.+++.. +..|+..+.... .......+..+.+.|+. .-+..+.|++ .
T Consensus 184 l~~-----g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~G~n-----~~~~~l~AAl--~ 246 (379)
T PRK11658 184 ITC-----A-EGGLVVTDDDELADRLRSLKFHGLGVDAFDR----QTQGRAPQAEVLTPGYK-----YNLADINAAI--A 246 (379)
T ss_pred Ccc-----c-CceEEEECCHHHHHHHHHHHHcCCCcchhhh----hcccCCCcceeeccccc-----cCcCHHHHHH--H
Confidence 642 2 23566664 566555422 222322111000 00000011111122331 1223445555 2
Q ss_pred HcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEc-C-C-CC---cceEEEecC----C--HHHHHHHHHHcCceeeee--
Q 001990 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-G-L-PF---FDTVKVKCA----D--AHAIASAAYKIEMNLRVV-- 502 (985)
Q Consensus 437 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~-~-~~---~~~~~i~~~----~--~~~l~~~L~~~Gi~~~~~-- 502 (985)
+...++++++.++..++++++.+.|++++ +..+ . . .. ...+++.++ + ..++.+.|.++||..+..
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc
Confidence 22336899999999999999999999886 3322 1 1 11 123444432 2 678999999999964310
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 -----------------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 -----------------------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
....+.+-++..-|++|+++++++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~ 375 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQ 375 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 013456666777788888888888863
No 444
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.56 E-value=1.9e-12 Score=149.16 Aligned_cols=278 Identities=17% Similarity=0.189 Sum_probs=169.6
Q ss_pred HHHHHHHHh-CCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCcEE---------
Q 001990 637 LGEWLCTIT-GFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKI--------- 704 (985)
Q Consensus 637 l~~~la~l~-G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~~v--------- 704 (985)
+++.+++.+ +.+. ..++++||++++++++..+|.+ .++++||+ ...+||+....+...|.+.
T Consensus 71 ~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~ 144 (375)
T PRK04260 71 LQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKA------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGV 144 (375)
T ss_pred HHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHh------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCC
Confidence 344455443 2222 2467899999888888877764 23456665 5678987655543322211
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEEccccccccCCCCC-
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~d---i~eI~~la~~~g~lliVD~a~~~~~~g~~~~- 779 (985)
..++.. -..|+++++++++ +++++|+++.+ +..|++.++ +++|.++|+++|+++++|+++. +++.-..+
T Consensus 145 ~~~~~~--~~~dl~~l~~~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~ 218 (375)
T PRK04260 145 PHFSYA--IFNDLNSVKALVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLY 218 (375)
T ss_pred CCeEEe--CCCCHHHHHHhcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchh
Confidence 111100 1248999999886 67888888876 467887632 8999999999999999999984 33211111
Q ss_pred --Cc--CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHH
Q 001990 780 --GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (985)
Q Consensus 780 --g~--~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~ 855 (985)
.. ..+|+++ ++|.|+ +|-.+|++++++++.+.+.... ..++ +.+++..+++
T Consensus 219 ~~~~~~~~pdi~t--~sK~l~-----~G~~ig~~~~~~~~~~~~~~~~--------------~~~t----~~~~~~~~~a 273 (375)
T PRK04260 219 AFEHYGIEPDIFT--LAKGLA-----NGVPVGAMLAKSSLGGAFGYGS--------------HGST----FGGNKLSMAA 273 (375)
T ss_pred hhHhhCCCCCEEE--eccccc-----CCcceEEEEEcHHHHhhcCCCC--------------CCCC----CCcCHHHHHH
Confidence 01 2367664 468774 2445889999887765442110 0011 1224445556
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CC-e-eEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHC
Q 001990 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-I-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (985)
Q Consensus 856 A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~-i-~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~ 930 (985)
+.+.+..+..+++. ++..++.+++++.|.+. .. + ...+ .+ . .+-+.+. .+..++.+.|.++
T Consensus 274 a~a~l~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g-~--~~~~~~~-------~~~~~~~~~l~~~ 339 (375)
T PRK04260 274 ASATLDIMLTAGFL---EQALENGNYLQEQLQKALQDKETVTTVRG-LG-Y--MIGIETT-------ADLSQLVEAARDK 339 (375)
T ss_pred HHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHhhCCCeeEEec-cc-e--EEEEEec-------CcHHHHHHHHHhC
Confidence 66777666544433 34455556666666541 11 1 1111 11 1 1223332 3567899999999
Q ss_pred CCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 931 GFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 931 Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
||.+.... .+.+|++++..+|++|++ ++++.|+++
T Consensus 340 Gi~v~~~~---~~~lR~~~~~~~t~~~i~---~~l~~l~~~ 374 (375)
T PRK04260 340 GLIVLTAG---TNVIRLLPPLTLTKEEIE---QGIAILSEV 374 (375)
T ss_pred CCEEecCC---CCEEEEcCCCccCHHHHH---HHHHHHHHh
Confidence 99874321 378999999999999999 999998765
No 445
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=3e-13 Score=155.53 Aligned_cols=210 Identities=18% Similarity=0.180 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++++|++.|.+. .+.+++|.+++..++.++. .++++|++++..|+..... ....|+++..++.
T Consensus 54 ~~~L~~~lA~l~g~~~-~i~~~sg~~Ai~~~l~~l~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 124 (386)
T PRK08045 54 RDVVQRALAELEGGAG-AVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_pred HHHHHHHHHHHhCCCe-EEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC
Confidence 5578999999999754 4666777665533333221 4678999998866643222 1234567776642
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ +++++|++++| |++|.+. |+++|+++||++|++++||+++..+. ...|-.+|+|+++
T Consensus 125 -----~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g~~vivDeay~~~~--~~~pl~~gaDivv 193 (386)
T PRK08045 125 -----GDEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREAGAVSVVDNTFLSPA--LQNPLALGADLVL 193 (386)
T ss_pred -----CCHHHHHHhcc---cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCccc--cCCchhhCCCEEE
Confidence 58999999997 78999999999 5799998 89999999999999999999985432 2356678999999
Q ss_pred eCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|+||+++.+ ++-.+|+++++ +++.+.+.. . + ..+ ..+.+ ...+|..++ |-+.
T Consensus 194 ~S~tK~l~G~---~d~~~G~vi~~~~~~~~~l~~-~-----------~-~~~-g~~~~-------p~~~~l~~r--gl~t 247 (386)
T PRK08045 194 HSCTKYLNGH---SDVVAGVVIAKDPDVVTELAW-W-----------A-NNI-GVTGG-------AFDSYLLLR--GLRT 247 (386)
T ss_pred eecceeccCC---CCceeEEEEeCcHHHHHHHHH-H-----------H-Hhc-CCCCC-------HHHHHHHHh--hhcc
Confidence 9999999521 11125666664 444433210 0 0 000 11111 122343333 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001990 868 LTEASKIAILNANYMAKRLEKH 889 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~ 889 (985)
+..++++..+++..+++.|++.
T Consensus 248 l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 7777888899999999999873
No 446
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=1.2e-12 Score=152.16 Aligned_cols=143 Identities=15% Similarity=0.141 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHH----HhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~----~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.. +.+++|..+..+++.++. .++++||++...|+.....+ ...|+++.+++.
T Consensus 60 ~~~Le~~lA~l~g~~~~-l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 60 NDVLEQRVAALEGGVGA-LAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred HHHHHHHHHHHhCCCce-eEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 45789999999997654 566778776655544432 36788998876555333332 235778877765
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ +++++|++++| |++|.+. |+++|+++||++|+++++|++++.+. ...|..+|+|+++
T Consensus 131 -----~d~e~le~ai~---~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~i~vVvD~a~a~~~--~~~p~~~gaDivv 199 (425)
T PRK06084 131 -----DDIAALEALID---ERTKAVFCESIGNPAGNII-DIQALADAAHRHGVPLIVDNTVATPV--LCRPFEHGADIVV 199 (425)
T ss_pred -----CCHHHHHHHhc---cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcccc--cCChhhcCCCEEE
Confidence 38999999997 78999999998 6899998 89999999999999999999986433 2355678999999
Q ss_pred eCCccccc
Q 001990 789 LNLHKTFC 796 (985)
Q Consensus 789 ~s~hKtl~ 796 (985)
.|+||+|+
T Consensus 200 ~S~tK~l~ 207 (425)
T PRK06084 200 HSLTKYIG 207 (425)
T ss_pred ECchhccc
Confidence 99999995
No 447
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.56 E-value=1.2e-12 Score=152.37 Aligned_cols=142 Identities=24% Similarity=0.226 Sum_probs=117.6
Q ss_pred HHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---hh
Q 001990 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (985)
Q Consensus 214 ~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---~~ 290 (985)
.++++.+|+++|.+. +.++++|++++.++++++. . +||+||++...|+.+...+...++..|++++.+|. ++
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~-~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNLA-Q--AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh-C--CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 467899999999764 6788999998888776652 3 78999999999988888777667778999999876 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001990 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (985)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~GaDi~v~s~-k~lg~ 361 (985)
+++ +++++++|++++| |++|.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|. |++++
T Consensus 135 l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD-~t~~~~~~~~~l~~g~Divv~S~sK~l~g 207 (418)
T TIGR01326 135 FEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD-NTFATPYLCRPIDHGADIVVHSATKYIGG 207 (418)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCchhhcCCchhcCCeEEEECccccccC
Confidence 555 7788999999988 78999999999999999999999995 45565655667788999999998 87763
No 448
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.56 E-value=7.7e-13 Score=154.84 Aligned_cols=296 Identities=14% Similarity=0.167 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHH----hcCC--CCCCEEEE-cCCCCCCcHHHHHhcCcEE
Q 001990 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCII-PVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 634 ~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~----~~g~--~~~~~Vlv-~~~~Hg~~~~~~~~~G~~v 704 (985)
..++.+.|+++++-+ ...++.+||+++++++++.+|.|.. .+|. +++.+||. ...+||.........|-..
T Consensus 94 ~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~ 173 (443)
T PRK08297 94 MARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDP 173 (443)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcc
Confidence 446777788876211 2347889999999999999988742 1342 12456775 6689998776654433110
Q ss_pred -----------EEEeCC-------C-C-------CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHHH
Q 001990 705 -----------VSVGTD-------A-K-------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICK 754 (985)
Q Consensus 705 -----------~~v~~~-------~-~-------g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~ 754 (985)
..++.. . + ...|++++++.+.++.+++++|+++-. ...|.+.+ .+++|.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~ 253 (443)
T PRK08297 174 RKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRE 253 (443)
T ss_pred cccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHH
Confidence 001100 0 0 001356777888766678999888643 35676632 5999999
Q ss_pred HHHHcCCEEEEEccccccccCCCCCCcC--------CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCcccc
Q 001990 755 IIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (985)
Q Consensus 755 la~~~g~lliVD~a~~~~~~g~~~~g~~--------g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~ 826 (985)
+|++||+++|+|+++. |+.+.|.+ .+|++++ .|.+ |.+|++..+ ++...+... +..
T Consensus 254 lc~~~g~llI~DEV~t----GfGRtG~~~a~~~~gv~PDiv~~--gK~l--------~~~a~l~~~-~i~~~~~~~-~~~ 317 (443)
T PRK08297 254 LCDEHDALLIFDEVQT----GVGLTGTAWAYQQLGVRPDIVAF--GKKT--------QVCGIMAGR-RVDEVEDNV-FAV 317 (443)
T ss_pred HHHHcCCEEEEechhh----ccCccchHHHHHhcCCCCCEEEe--cccc--------cccceecch-HHHHhhhhh-ccC
Confidence 9999999999999873 34344322 3799876 4765 122444333 221111000 000
Q ss_pred CCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee---EcCCCCc
Q 001990 827 TGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL---FRGVNGT 900 (985)
Q Consensus 827 ~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~---~~g~~~~ 900 (985)
. ....+++.|+++.++++.+.|..+.++++. ++..+..++|+++|++. +... ..|. +
T Consensus 318 ------~------~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G- 380 (443)
T PRK08297 318 ------S------SRINSTWGGNLVDMVRARRILEVIEEDGLV---ENAARQGEYLLARLEELAAEFPAVVSNVRGR-G- 380 (443)
T ss_pred ------c------cccCCCCCccHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHCCCcceeeecc-c-
Confidence 0 001123445667777788888888766543 45667778888888652 2211 1221 1
Q ss_pred eeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 901 VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 901 ~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
. .+-+.+.. ......+.+.|.++|+++.... .+.+|++|+..+|++||| +++++|.++++++
T Consensus 381 ~--~~~i~~~~-----~~~~~~~~~~l~~~Gvl~~~~~---~~~lr~~P~l~~t~~eid---~~l~~l~~~l~~~ 442 (443)
T PRK08297 381 L--MCAFDLPT-----TADRDEVIRRLWEEGVLVLPCG---ERSIRFRPALTVTTEEID---AAIDALRRALPEV 442 (443)
T ss_pred e--EEEEEecC-----HHHHHHHHHHHHHCCEEEecCC---CCeEEEECCccCCHHHHH---HHHHHHHHHHHhh
Confidence 1 22333321 1124578889999999874322 267999999999999999 9999999887654
No 449
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.56 E-value=3.7e-13 Score=152.48 Aligned_cols=277 Identities=13% Similarity=0.121 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
..++++.+++.+|.+...+..++|++. +..++++ +. .++ +|+++++.+..+...++..|++++.+|.+. .
T Consensus 42 ~~~lr~~ia~~~~~~~~~I~it~Gs~~--~l~~~~~-~~-----~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~-~ 111 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKIKVLIGPGLTH--FIYRLLS-YI-----NVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL-I 111 (332)
T ss_pred HHHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHH-Hh-----CCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc-c
Confidence 447899999999998877666666652 2222222 11 244 477777766666667889999999999864 3
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-CCCCC----CcCCCc
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP----GYIGAD 785 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g~~~~----g~~g~D 785 (985)
..|.+.+++ .++++|++++| |++|.+- ..+++|.++|+++|+++++|+++..-.. +.... ...+--
T Consensus 112 ~~~~~~l~~------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~v 185 (332)
T PRK06425 112 NNNPEILNN------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNV 185 (332)
T ss_pred cCcHHHHhh------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCE
Confidence 446554431 46788999999 5799986 2478888889999999999998742111 10000 111112
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
+++.|+.|+|++ .|.++|++++++++++.+.... ...+++ .. + ..++.....
T Consensus 186 i~~~SfSK~~~l----~GlRiGy~v~~~~li~~l~~~~--------------~~~~~~-----~~--~---~~~l~~~~~ 237 (332)
T PRK06425 186 IIGRSLTKILGI----PSLRIGYIATDDYNMKISRKIT--------------EPWSVC-----DP--A---IDFIRSIDL 237 (332)
T ss_pred EEEeecHHhcCC----chhhheeeecCHHHHHHHHHcC--------------CCCccC-----HH--H---HHHHHHhhh
Confidence 556677777754 4789999999887765543110 000111 11 1 122222222
Q ss_pred hhH-HHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCC-CCC--
Q 001990 866 KGL-TEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP-- 940 (985)
Q Consensus 866 ~gl-~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~-~~p-- 940 (985)
+.+ ++..+...++.+++.+.|++ ++.+. ..+.+. .+.+.++ +..++.+.|.++||.+... .|+
T Consensus 238 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~-~~~~g~---f~~~~~~--------~~~~~~~~l~~~gi~v~~~~~f~~~ 305 (332)
T PRK06425 238 DYVAKHSLDIMENERSYLINNLEAMGFRAA-GDPSAN---FITFMIP--------DAHDFYSYLLKNGILVRLLDDYECL 305 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEC-CCCCce---EEEEEcC--------CHHHHHHHHHHCCeEEEECCCCCCC
Confidence 222 33445566777888888887 43332 112221 1334432 4678999999999987432 232
Q ss_pred CCCEEEEeccCCCCHHhhchHHHHHHHHHHHH
Q 001990 941 VPGTLMIEPTESESKVCHNREDLFFQILLSLT 972 (985)
Q Consensus 941 v~~~lris~t~~~t~eeId~~~~~i~aL~~i~ 972 (985)
.++++||++ .+.+|.+ +|+++|++++
T Consensus 306 ~~~~iRis~---~~~~~~~---~l~~al~~~~ 331 (332)
T PRK06425 306 GEQYIRIAI---RRRSFNI---KLVNALRNFL 331 (332)
T ss_pred CCCEEEEEe---CCHHHHH---HHHHHHHHHh
Confidence 146899998 5789999 9999998764
No 450
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.55 E-value=9.9e-14 Score=140.09 Aligned_cols=161 Identities=27% Similarity=0.357 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHh--CCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH-HHHHhcCcEEEEEeCC
Q 001990 634 FNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-ATAAMCGMKIVSVGTD 710 (985)
Q Consensus 634 ~~el~~~la~l~--G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~-~~~~~~G~~v~~v~~~ 710 (985)
+.++++++++++ +.+.. ++.++|+.++..++++++ .++++|++++..|+.+. ..+...|++++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~-~~~~~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKA-VFVPSGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcE-EEeCCcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 457899999999 44444 344466666655555442 24678999888887777 6678899999999987
Q ss_pred CCCCCCH--HHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCC--CCCcCCCc
Q 001990 711 AKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--SPGYIGAD 785 (985)
Q Consensus 711 ~~g~iDl--e~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~--~~g~~g~D 785 (985)
.++..+. +.+++... .++++++++++|+ ..|... |+++|+++|+++|+++|+|+++........ .+...++|
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d 149 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLV-PLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGAD 149 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEc-CHHHHHHHHHHcCCEEEEecccccccccccccccccccCC
Confidence 6654433 35544332 3788999999885 578877 799999999999999999999864333221 23456799
Q ss_pred EEEeCCcccccccCCCCCCcceeeeec
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~ 812 (985)
+++.|+||+| |+|++|++++|
T Consensus 150 ~~~~s~~K~~------~~~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNL------GGEGGGVVIVK 170 (170)
T ss_pred EEEEEccccc------CCCceEEEEeC
Confidence 9999999998 35899999875
No 451
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.55 E-value=4.5e-13 Score=153.07 Aligned_cols=323 Identities=16% Similarity=0.181 Sum_probs=187.1
Q ss_pred CCcc-ccCCCCCCCCCCCCCHHHHHHHHHHHHcCCC-ccc--eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHh
Q 001990 131 PKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNK-VYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIA 206 (985)
Q Consensus 131 p~~~-~~~~~~lp~~~~~~se~e~~~~~~~~~~~n~-~~~--~~lG~g~~~~~~p~~v~~~i~~~~~~~t~~~py~~e~s 206 (985)
|.++ ..-+.++| .++.+..++++.+++...... .+. .|.|.-.-+.-.++.+.+.+.. .+ .-+.+..+.+
T Consensus 1 P~~l~~~~~~~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~---~~-n~n~~~~~~~ 74 (373)
T PF00282_consen 1 PGELRARLDEELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLAS---AL-NQNGFTWEAS 74 (373)
T ss_dssp TTSSGGGCHCCHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHH---HH-T-BTTSTTTS
T ss_pred ChhhhhcCccccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHh---hh-cccccccccc
Confidence 4455 22235666 466788999999987644432 221 2322211111122223222221 00 0123334556
Q ss_pred hHHHHHHHHHHHHHHHhhCCCC-------cceeeccchHHHHHHHHHHhhhh-------cC----CCCEEEEcCCCChhH
Q 001990 207 QGRLESLLNFQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQT 268 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g~~~-------~~~sl~~~~ta~~ea~~~a~~~~-------~~----~g~~Vlv~~~~h~s~ 268 (985)
....+...+.-+++++|+|.+. +...+++|||.+.-.++++.|.. .+ ++-.|++++..|.++
T Consensus 75 P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~ 154 (373)
T PF00282_consen 75 PAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSI 154 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THH
T ss_pred cccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHH
Confidence 6667777888899999999983 34667788886665555544321 01 123688999999999
Q ss_pred HHHHHHhhcCCCeEEEEeCc--------hhhhc-c-----CCCE-eEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEE
Q 001990 269 IDICITRADGFDIKVVVSDL--------KDIDY-K-----SGDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMA 332 (985)
Q Consensus 269 ~~~~~~~a~~~gi~v~~~~~--------~~l~~-l-----~~~t-~~V~v~~p-n~~G~i~dl~~I~~~a~~~galliV~ 332 (985)
.+.+.- .|+.++.|+. ++|++ + ...+ .+|+.+.+ +.+|.++|+++|+++|++++++++|+
T Consensus 155 ~Kaa~~----lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVD 230 (373)
T PF00282_consen 155 EKAARI----LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVD 230 (373)
T ss_dssp HHHHHH----TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEE
T ss_pred HHhcce----eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeec
Confidence 988754 4666777754 34544 2 2223 36667777 57999999999999999999999996
Q ss_pred eccccccCCCC------CCcccceEEEecC-ccccccCCCCCCceEEEEEchh-hHh-cC--CCceeeeeecCCCCcceE
Q 001990 333 TDLLALTILKP------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKR-MM--PGRIVGVSIDSSGKPALR 401 (985)
Q Consensus 333 a~~~alg~l~~------p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~-~~~-~l--p~~~vG~s~d~~g~~~~~ 401 (985)
+-.-+...+.+ .+--+||-+..+. |+++.|++ +|++.+|++ .++ .+ ....++-. +.+....+
T Consensus 231 aA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~~-~~~~~~~~- 303 (373)
T PF00282_consen 231 AAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGND-DRESDESY- 303 (373)
T ss_dssp ETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S--SSS-GGG-
T ss_pred ccccccccccccccccccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhccc-cccccccc-
Confidence 52212111211 1234699999999 77777864 567878764 332 22 11111100 00000000
Q ss_pred EecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEe
Q 001990 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 481 (985)
Q Consensus 402 l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~ 481 (985)
..++..+-......++..-+.+..+|.+|++++.+++.++|++|++.|++.++++++.++.+..|+|+
T Consensus 304 ------------~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr 371 (373)
T PF00282_consen 304 ------------DYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFR 371 (373)
T ss_dssp ------------CEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEE
T ss_pred ------------ccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEE
Confidence 00111111112333333333468899999999999999999999999999966999988878888886
Q ss_pred c
Q 001990 482 C 482 (985)
Q Consensus 482 ~ 482 (985)
.
T Consensus 372 ~ 372 (373)
T PF00282_consen 372 Y 372 (373)
T ss_dssp E
T ss_pred e
Confidence 4
No 452
>PRK06149 hypothetical protein; Provisional
Probab=99.55 E-value=8.3e-13 Score=168.32 Aligned_cols=295 Identities=18% Similarity=0.249 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHhC--CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhcC-------c
Q 001990 633 MFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------M 702 (985)
Q Consensus 633 ~~~el~~~la~l~G--~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~G-------~ 702 (985)
...++.++|++++. .+. .++++||++++++++..+|.| .++.+|| +...+||....+....+ .
T Consensus 625 ~~~elae~L~~~~p~~~~~-v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 625 AVAEFSERLAALAPDGLDT-VFLVNSGSEANDLAIRLAWAA------SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred HHHHHHHHHHHhCCCCcCE-EEEeCCchHHHHHHHHHHHHh------cCCCeEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 45678899999883 443 477899999999999988876 2344555 46689987644322111 0
Q ss_pred ------EEEEEeCCCC----C-CCC-----HHHHHHHHH---hcCCCeEEEEEEcC-CCccccccC----HHHHHHHHHH
Q 001990 703 ------KIVSVGTDAK----G-NIN-----IEELRKAAE---ANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHD 758 (985)
Q Consensus 703 ------~v~~v~~~~~----g-~iD-----le~L~~~i~---~~~~~t~~Vvi~~p-n~~G~i~~d----i~eI~~la~~ 758 (985)
-+..++.... . ..| .+++++.++ ++++++++|+++.. +..|.+. + +++|.++|++
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~-~p~~yL~~l~~lc~~ 776 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIA-LPPGYLQQVYAAVRA 776 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCccc-CCHHHHHHHHHHHHH
Confidence 1222332111 1 112 345555443 23467888877642 4567775 4 9999999999
Q ss_pred cCCEEEEEccccccccCCCCCCc-------C--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCC
Q 001990 759 NGGQVYMDGANMNAQVGLTSPGY-------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG 829 (985)
Q Consensus 759 ~g~lliVD~a~~~~~~g~~~~g~-------~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~ 829 (985)
||+++|+|++|. |+.+.|+ + .+|++++ .|.+ |+|-| +|.+++++++.+.+... +.
T Consensus 777 ~g~llI~DEV~t----GfGRtG~~~~a~e~~gv~PDivt~--gK~l----g~G~P-l~av~~~~~i~~~~~~~--~~--- 840 (972)
T PRK06149 777 RGGVCIADEVQV----GYGRLGHYFWGFEQQGVVPDIITM--AKGM----GNGHP-LGAVITRREIAEALEAE--GY--- 840 (972)
T ss_pred cCCEEEEEeehh----cCCccCccchhhhhcCCCCCEEEe--cccc----cCCee-eEEEEEcHHHHhhhccC--Cc---
Confidence 999999999872 3333443 1 3798865 3665 44434 67888888877655321 00
Q ss_pred CCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEE
Q 001990 830 IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHE 904 (985)
Q Consensus 830 ~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~ 904 (985)
..+++.|++..++++.+.|..+.++++. ++.....++|+++|++. ..++ +.|. +. +
T Consensus 841 ------------~~sT~~gnP~~~aaala~L~~i~~e~l~---~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl-~-- 901 (972)
T PRK06149 841 ------------FFSSTGGSPVSCRIGMAVLDVLREEKLQ---ENARRVGDHLKARLEALADRHPLIGAVHGM-GL-Y-- 901 (972)
T ss_pred ------------ccCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCCCeEEEeec-ce-E--
Confidence 0012345677778888888888776554 45566778888888752 3322 2221 11 1
Q ss_pred EEEEec-Cc--cccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 905 FIVDLR-GL--KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 905 ~vv~~~-~~--~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
+-+.+. .. +.........+.++|.++|+.+.... +..+.|+|.|...+|++||| .++++|.+++.+
T Consensus 902 ~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g-~~~~vl~~~Ppl~it~~~id---~~~~~l~~~l~~ 970 (972)
T PRK06149 902 LGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG-DHLNILKIKPPLCLDRESAD---FFVDMLDRVLTE 970 (972)
T ss_pred EEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC-CCCCEEEEECCCcCCHHHHH---HHHHHHHHHHHh
Confidence 122221 00 00000114578889999999985432 12478999999999999999 999999998764
No 453
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.55 E-value=2e-12 Score=153.74 Aligned_cols=311 Identities=14% Similarity=0.084 Sum_probs=177.3
Q ss_pred hcHHHHHHHHHHHHHHHhCCC--ccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~--~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+.+++.+..|.+ ...++.++|++ +...+ ++.+. ..++|+|+++.+.|..+...++..|.++
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~---~~~l~----~~~gD~Vlv~~P~y~~y~~~~~~~g~~~ 187 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLL---LQLLI----GDPSDGVMIPIPQYPLYSAAITLLGGKQ 187 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHH---HHHhc----cCCCCEEEECCCCchhHHHHHHHcCCEE
Confidence 465556656666666555543 34555555544 44222 22221 0367899999997777777788999999
Q ss_pred EEEeCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc--c
Q 001990 705 VSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ--V 774 (985)
Q Consensus 705 ~~v~~~~~--g~iDle~L~~~i~~~---~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~--~ 774 (985)
+.++++++ +.+|+++|+++++.. .+++++|++++| |++|.+. ..+++|+++|+++|+++++|+++..-. .
T Consensus 188 v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~ 267 (481)
T PTZ00377 188 VPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDG 267 (481)
T ss_pred EEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCC
Confidence 99998753 479999999999731 127898888999 6899986 238999999999999999999874211 1
Q ss_pred C--CCCC----CcCCC------c-EEEeCCcccc-cccCCCCCCcceeeee---cccccCcCCCCccccCCCCCCCCCCC
Q 001990 775 G--LTSP----GYIGA------D-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (985)
Q Consensus 775 g--~~~~----g~~g~------D-i~~~s~hKtl-~~p~g~GGPg~G~l~~---~~~l~~~lpg~~~g~~~~~~~~~~~~ 837 (985)
+ +... ..+.. . +++.|+.|+| ++ .|.++|++++ ++++++.+....
T Consensus 268 ~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~----~GlRiG~~~~~~~p~~li~~l~~~~-------------- 329 (481)
T PTZ00377 268 EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGE----CGRRGGYFELTNIPPEVREQIYKLA-------------- 329 (481)
T ss_pred CCCcccHHHHHHhhcccccCCeEEEEEecCCcccccC----CcCceEEEEEeCCCHHHHHHHHHHh--------------
Confidence 1 1010 01111 1 4556778874 43 4789999986 566554432100
Q ss_pred CCCCcccccchhhhHHHHHHHHHHH--hchh---hH----HHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEE
Q 001990 838 PLGTIAAAPWGSALILPISYTYIAM--MGSK---GL----TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVD 908 (985)
Q Consensus 838 ~t~~i~s~~~g~~~~~~~A~a~l~~--lg~~---gl----~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~ 908 (985)
. ...+.+..++. ++.+++.. .++. .+ ++..+...++.+++.+.|++...+.+..+++.++ +.++
T Consensus 330 ~-~~~~~~~~~Q~----a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~f--l~~~ 402 (481)
T PTZ00377 330 S-INLCSNVVGQL----MTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMY--AFPR 402 (481)
T ss_pred h-eecCCChHHHH----HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEE--EEee
Confidence 0 01111111121 12222211 0111 11 1222233566778888887632232222322222 1223
Q ss_pred ecCccc-------cCCC-CHHHH-HHHHHHCCCccCC-CCCC---CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 909 LRGLKN-------TAGI-EPEDV-AKRLMDYGFHGPT-MSWP---VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 909 ~~~~~~-------~~g~-~~~~l-~~~L~e~Gi~~~~-~~~p---v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
++ .+. ..+. +..++ ...|.++||.+.. -.|. ..+.+|+++. .++++++ +.++.|++++++.
T Consensus 403 ~~-l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~---~~l~rl~~~~~~~ 476 (481)
T PTZ00377 403 IE-LPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIE---EMVKKIKEFHESF 476 (481)
T ss_pred cc-CchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHH---HHHHHHHHHHHHH
Confidence 22 000 0001 12334 3455677998643 2222 2358999997 6678898 9999998887765
Q ss_pred H
Q 001990 976 T 976 (985)
Q Consensus 976 ~ 976 (985)
.
T Consensus 477 ~ 477 (481)
T PTZ00377 477 M 477 (481)
T ss_pred H
Confidence 4
No 454
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.55 E-value=9.6e-13 Score=148.90 Aligned_cols=269 Identities=16% Similarity=0.110 Sum_probs=167.0
Q ss_pred HHHHHHHHHHhCCCccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++.+++.+|.+ ++..++|++ +. . ++++. .++++|+++++.+..+...++..|++++.+|.
T Consensus 52 ~~Lr~~ia~~~~~~--~I~it~Gs~~al-~--~~~~~-------~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~---- 115 (330)
T PRK05664 52 DGLEAAARAYYGAP--QLLPVAGSQAAI-Q--ALPRL-------RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE---- 115 (330)
T ss_pred HHHHHHHHHHhCCC--CEEECcCHHHHH-H--HHHHc-------cCCCEEEEcCCChHHHHHHHHHcCCeEEEech----
Confidence 36788999999875 344444554 33 1 22221 36789999998776667778899999988875
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC-CC-c-EE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GA-D-VC 787 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~-g~-D-i~ 787 (985)
++++++++ +++++++++| |++|.+-+ ++++|+++|+++|+++++|+++.... .......+ .. . ++
T Consensus 116 ----~~~~~~~~----~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~-~~~s~~~~~~~~~vi~ 186 (330)
T PRK05664 116 ----AEVEAALD----SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT-PQHSLAACAHRPGLIV 186 (330)
T ss_pred ----hhHhhhhc----CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC-CcccccccccCCCEEE
Confidence 34556553 5667888999 57999862 47777788899999999999874221 10111111 11 2 56
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+.|++|+|+. .|.++|++++++++.+.+.... ...++++ ....++.+++.. .+-
T Consensus 187 ~~SfSK~~gl----~GlRiG~~v~~~~l~~~~~~~~--------------~~~~~~~------~~~~~~~~~L~~--~~~ 240 (330)
T PRK05664 187 LRSFGKFFGL----AGARLGFVLAEPALLRALAELL--------------GPWTVSG------PTRWLAQAALAD--TPW 240 (330)
T ss_pred EeeccccccC----CCcceEEEEeCHHHHHHHHHhc--------------CCCCCCH------HHHHHHHHHHhC--hHH
Confidence 7777777754 4789999999877765542110 0001111 111112222321 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEE
Q 001990 868 LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lr 946 (985)
.++..+....+.+++.+.|++ ++. ..+ +. ...+.+.. .+..++.+.|.++||.+... ..++.+|
T Consensus 241 ~~~~~~~~~~~r~~l~~~L~~~~~~--~~~--~~-~~f~~~~~--------~~~~~~~~~l~~~gi~v~~f--~~~~~iR 305 (330)
T PRK05664 241 QRRQRERLLAASQRLAALLRRHGLT--PAG--GC-ALFQWVRT--------EDAAALHEFLARRGILTRLF--EQPASLR 305 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCc--ccC--Cc-ceEEEEec--------CCHHHHHHHHHHCCeEEEEC--CCCCeEE
Confidence 334445556677888888887 332 111 11 11122222 15678999999999998533 2357999
Q ss_pred EeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 947 IEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 947 is~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
|+++. +++|++ +|+++|+++.++
T Consensus 306 is~~~--~~~~~~---~l~~al~~~~~~ 328 (330)
T PRK05664 306 FGLPA--DEADWA---RLDQALLAYRKE 328 (330)
T ss_pred EECCC--CHHHHH---HHHHHHHHHHhh
Confidence 99863 678899 999999988765
No 455
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.54 E-value=2.2e-12 Score=150.33 Aligned_cols=156 Identities=19% Similarity=0.195 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.. +.+++|+.++.+++.++. .++++||++...|+... ..+...|++++.++.
T Consensus 59 ~~~le~~lA~l~g~~~~-v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 59 TDVLEQRIAALEGGVAA-LAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 45899999999998654 667788877655554432 36788999877554322 224568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ +++++|++++| |++|.+. |+++|+++|+++|+++++|+++..+ ....+..+|+|+++
T Consensus 130 ~-----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~i~livD~t~~~~--~~~~~l~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID---ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHGVPLIVDNTFATP--YLCRPIDHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCchh--hcCCchhcCCeEEE
Confidence 3 8999999997 78999999998 5789988 8999999999999999999998533 23445567899999
Q ss_pred eCCcccccccCCCCCCcceeeeecc
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKK 813 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~ 813 (985)
.|++|+|+. .|..+|++++++
T Consensus 199 ~S~sK~l~g----~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGG----HGTAIGGVIVDG 219 (418)
T ss_pred ECccccccC----CccceEEEEEec
Confidence 999999952 245577666653
No 456
>PLN02271 serine hydroxymethyltransferase
Probab=99.54 E-value=4.1e-13 Score=155.18 Aligned_cols=292 Identities=12% Similarity=0.027 Sum_probs=188.9
Q ss_pred HHHHHHHHhhCCCC----cceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHH-----HhhcCCCeEEEE
Q 001990 215 NFQTMIADLTGLPM----SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-----TRADGFDIKVVV 285 (985)
Q Consensus 215 e~q~~ia~L~g~~~----~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~-----~~a~~~gi~v~~ 285 (985)
-+++...+|+|++. +|+-.+ +|+.|..++++++ +. +||+|+..+..|+..+.... ..+...|+.+..
T Consensus 198 la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~AL-l~--PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~ 273 (586)
T PLN02271 198 LCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGL-LL--PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFES 273 (586)
T ss_pred HHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHh-cC--CCCEEEEecCCCCCchhcccccccccccccccceEEE
Confidence 34577888999887 677666 6777778888877 44 89999999888876655321 112234544444
Q ss_pred e-----------Cchhhhc--cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcc
Q 001990 286 S-----------DLKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGEL 347 (985)
Q Consensus 286 ~-----------~~~~l~~--l~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l-----~~p~~~ 347 (985)
+ |++++++ ...++++|++....+. ...|+++|.++|+++|++++||+ .+..|++ ..|..
T Consensus 274 vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp-r~~D~~~i~eIAdevGA~LmvD~-AH~aGLIa~g~~~sP~~- 350 (586)
T PLN02271 274 LPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP-REWDYARFRQIADKCGAVLMCDM-AHISGLVAAKECVNPFD- 350 (586)
T ss_pred EEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-CcCCHHHHHHHHHHcCCEEEEEC-cccccccccCcCCCCCc-
Confidence 3 3355665 4678999998765444 66799999999999999999942 2344444 23433
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001990 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (985)
Q Consensus 348 GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l 426 (985)
+||++++++ |+|.+|. .|+++++++..+.+.|...+|+.+.. .+.+.-.+ .+.-.-..+.|+.| ..+
T Consensus 351 ~aDvvt~TTHKtLrGPr------GG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI-~~aVfPglqgGphn----~~I 418 (586)
T PLN02271 351 YCDIVTSTTHKSLRGPR------GGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKI-NFAVFPSLQGGPHN----NHI 418 (586)
T ss_pred CCcEEEeCCcccCCCCC------ceEEEecccccccccCCccccccccc-cHHHHHHh-hcccCCccccChhH----HHH
Confidence 699999999 8887664 36788887766666666656543210 00000000 00000012334333 335
Q ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcceEEEecCC----HHHHHHHHHHcCceeee
Q 001990 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD----AHAIASAAYKIEMNLRV 501 (985)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~~----~~~l~~~L~~~Gi~~~~ 501 (985)
.|+..++ .......+++-++++.+||+.|++.|.+.| ++++. ....+.+.+++.. ...+.+.|.+.||.+..
T Consensus 419 AalAval--kea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nk 495 (586)
T PLN02271 419 AALAIAL--KQVATPEYKAYMQQVKKNAQALASALLRRK-CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNK 495 (586)
T ss_pred HHHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHHHCC-CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEecc
Confidence 5555554 333344568889999999999999999988 99984 3334456665532 67777788888997643
Q ss_pred ---------ecCCeEEEEeccCCC----HHHHHHHHHHHh
Q 001990 502 ---------VDSNTVTASFDETTT----LEDVDKLFIVFA 528 (985)
Q Consensus 502 ---------~~~~~lris~~~~~t----~edid~ll~~l~ 528 (985)
..++.+|+...+.++ ++|++++.+.+.
T Consensus 496 n~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 496 TAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred ccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 235779999887665 467777666665
No 457
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.54 E-value=1.6e-13 Score=157.91 Aligned_cols=208 Identities=17% Similarity=0.221 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH----HHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~----~~~~~G~~v~~v~~ 709 (985)
..++++.+++++|.+.+ +.+++|+.++.+++.++. .++++||++...|+.... .+...|++++.++.
T Consensus 56 ~~~le~~la~l~g~~~~-~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEGAERA-VATATGMSAIQAALMTLL--------QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 56889999999998765 556778877755554432 367889998887765432 34568999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |+++++++++ +++++|++++| |++|.+. |+++|+++||++|++++||+++.... ...|...|+|+++
T Consensus 127 ~-----d~~~l~~~i~---~~tklV~le~p~np~g~~~-dl~~I~~la~~~gi~livD~a~~~~~--~~~pl~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK---PNTKLVFVETPSNPLGELV-DIAALAELAHAIGALLVVDNVFATPV--LQQPLKLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhhCCCEEE
Confidence 4 7999999887 78999999999 5799998 89999999999999999999985332 2345567899999
Q ss_pred eCCcccccccCCCCCC-cceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGP-g~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|++|+|+. .|- .+|+++.++++.+.+.... + .++...+ +. .+|..+ .+.+.
T Consensus 196 ~S~sK~l~g----~g~~~gG~vv~~~~~~~~l~~~~-----------~--~~g~~~~-----p~---~a~~~l--~~l~t 248 (380)
T TIGR01325 196 YSATKHIDG----QGRVMGGVIAGSEELMAEVAVYL-----------R--HTGPAMS-----PF---NAWVLL--KGLET 248 (380)
T ss_pred eeccceecC----CCCeEEEEEEeCHHHHHHHHHHH-----------H--hhCCCCC-----HH---HHHHHH--hccCc
Confidence 999999952 122 2477777766544332100 0 0111111 11 123322 34455
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+....++..+++.++.+.|++
T Consensus 249 l~~r~~~~~~~a~~la~~L~~ 269 (380)
T TIGR01325 249 LSLRMQKQFDSALAIAEWLQA 269 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 666677788899999999986
No 458
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.54 E-value=4.5e-14 Score=157.05 Aligned_cols=212 Identities=17% Similarity=0.198 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-- 288 (985)
..+.++|+.+|+++|++.+ +.+++|+|.+..++++++. . +||+|++++.+|+++...+.. .|++++++++
T Consensus 59 g~i~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~-~--~gd~Vlv~~~~h~s~~~~~~~----~g~~~~~v~~~~ 130 (294)
T cd00615 59 GPIKEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVC-G--PGDKILIDRNCHKSVINGLVL----SGAVPVYLKPER 130 (294)
T ss_pred hHHHHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcC-C--CCCEEEEeCCchHHHHHHHHH----CCCEEEEecCcc
Confidence 3477899999999998763 2246888888888877652 3 899999999999999988763 4666666532
Q ss_pred ------------hhhhc-c--CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccc-----cCCC-CCCcc
Q 001990 289 ------------KDIDY-K--SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TILK-PPGEL 347 (985)
Q Consensus 289 ------------~~l~~-l--~~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~al-----g~l~-~p~~~ 347 (985)
+++++ + ++++++|++++||++|.+.|+++|+++||++|++++||. .++. +.+. ...++
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDe-A~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDE-AHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEEC-cchhhhccCcccCcchhhc
Confidence 34555 4 357999999999999999999999999999999999942 2221 1111 23457
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001990 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (985)
Q Consensus 348 GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l 426 (985)
|+|++++|+ |++++| +++|+++++++.... .+ +. +...+.+.+++++ ..+
T Consensus 210 ~~div~~S~hK~l~g~-----~~~~~l~~~~~~~~~--~~-------------~~------~~~~~~~ttsps~---~~~ 260 (294)
T cd00615 210 GADIVVQSTHKTLPAL-----TQGSMIHVKGDLVNP--DR-------------VN------EALNLHQSTSPSY---LIL 260 (294)
T ss_pred CCcEEEEchhcccchH-----hHHHHHHhCCCcCCH--HH-------------HH------HHHHHHCCCCcHH---HHH
Confidence 999999999 766543 234666665431110 00 00 0000111122222 233
Q ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhc
Q 001990 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK 463 (985)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~ 463 (985)
.++.++. .++..+| ++..++..+++++++++|.+
T Consensus 261 asl~~a~--~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 261 ASLDVAR--AMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHH--HHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 3333333 3333445 44677889999999998863
No 459
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.54 E-value=8.6e-13 Score=154.24 Aligned_cols=292 Identities=12% Similarity=0.154 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHhC---CCccceecChHHHHHHHHHHHHHHHHH----hcCCCC--CCEEEE-cCCCCCCcHHHHHhcCcE
Q 001990 634 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHK----ARGDHH--RNVCII-PVSAHGTNPATAAMCGMK 703 (985)
Q Consensus 634 ~~el~~~la~l~G---~~~~~~~~~sGa~g~~a~l~air~~~~----~~g~~~--~~~Vlv-~~~~Hg~~~~~~~~~G~~ 703 (985)
..++.++|+++++ ++ ..++.+||+++++++++.+|.|.. .+|..+ +.+||. ..++||....+....|-.
T Consensus 87 ~~~l~~~l~~~~~~~~~~-~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~ 165 (431)
T TIGR03251 87 MARFVDTFARVLGDPALP-HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTD 165 (431)
T ss_pred HHHHHHHHHHhcCCCCcC-EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCc
Confidence 4456667777752 22 247889999999999999998741 123211 456765 668999876665433311
Q ss_pred -E----------EEE--e-----CCCCC--------CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc---CHHHHH
Q 001990 704 -I----------VSV--G-----TDAKG--------NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEIC 753 (985)
Q Consensus 704 -v----------~~v--~-----~~~~g--------~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~---di~eI~ 753 (985)
. ..+ | .+.+. ..+++++++.++++.+++++|+++-. ...|.+.+ .+++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~ 245 (431)
T TIGR03251 166 PRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMR 245 (431)
T ss_pred cccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHH
Confidence 0 001 1 10000 12356677777766678999998753 45676642 499999
Q ss_pred HHHHHcCCEEEEEccccccccCCCCCCc--------CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccc
Q 001990 754 KIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 825 (985)
Q Consensus 754 ~la~~~g~lliVD~a~~~~~~g~~~~g~--------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g 825 (985)
++|++||+++++|++|. |+.+.|. ..+|+++++ |.+ |.+|++..+ ++..... ..+.
T Consensus 246 ~lc~~~g~llI~DEV~t----G~GrtG~~~a~~~~gv~PDi~~~g--K~~--------~~~g~~~~~-~i~~~~~-~~~~ 309 (431)
T TIGR03251 246 ALCDEHDALLIFDEVQT----GVGLTGTAWAYQQLGVQPDIVAFG--KKT--------QVCGIMAGR-RVDEVAD-NVFA 309 (431)
T ss_pred HHHHHcCCEEEEecchh----ccCccchHHHHHhcCCCCCEEEec--ccC--------ccceEEecc-hHHHhhh-hccc
Confidence 99999999999999874 2333332 247998763 654 334555433 2211110 0000
Q ss_pred cCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CC-eeEcCCCCce
Q 001990 826 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-ILFRGVNGTV 901 (985)
Q Consensus 826 ~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~-i~~~g~~~~~ 901 (985)
+ . +...+++.|++..++++.+.|..+.++++. ++..+..++|.++|++. +. +..... +.
T Consensus 310 ~------~------~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~i~~vr-g~- 372 (431)
T TIGR03251 310 V------P------SRLNSTWGGNLVDMVRATRILEIIEEERLV---DNARVQGAHLLARLHELAAEFPHLVSNPR-GR- 372 (431)
T ss_pred C------c------cccCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCccceeccc-cc-
Confidence 0 0 001122335666677778888888666653 34455666777777541 22 221111 10
Q ss_pred eEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHH
Q 001990 902 AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 902 ~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~ 970 (985)
...+.+.+.. ......+.+.|.++|+++.... .+.+|++|+..+|++||| +++++|.+
T Consensus 373 G~~~~i~~~~-----~~~~~~~~~~l~~~Gvl~~~~g---~~~lr~~P~l~~t~~eid---~~l~~l~~ 430 (431)
T TIGR03251 373 GLMCAFDLPS-----TADRDEVIRQLYREGVLLLGCG---ERSIRFRPPLTVTREEID---AAIDAIRR 430 (431)
T ss_pred ceeEEEEeCC-----HHHHHHHHHHHHhCCeEEecCC---CCeEEEECCccCCHHHHH---HHHHHHHh
Confidence 1112333321 1124578889999999974322 267999999999999999 99998875
No 460
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=1.4e-12 Score=150.20 Aligned_cols=285 Identities=13% Similarity=0.073 Sum_probs=169.0
Q ss_pred HHHHHHHHHhC--------CCccceecChHHH-HHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCcHHHHHhcCcEEE
Q 001990 636 NLGEWLCTITG--------FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIV 705 (985)
Q Consensus 636 el~~~la~l~G--------~~~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~-~~Vlv~~~~Hg~~~~~~~~~G~~v~ 705 (985)
++++.++++++ ++..++..++|++ +...++.+.. .++ ++|+++++.+..+...++..|++++
T Consensus 70 ~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~--------~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~ 141 (374)
T PRK02610 70 ALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATC--------LGGEGSILVAEPTFSMYGILAQTLGIPVV 141 (374)
T ss_pred HHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc--------CCCCCeEEEcCCChHHHHHHHHHcCCEEE
Confidence 45566666665 4445566666655 3322222211 133 3799999877666677889999999
Q ss_pred EEeCCCC-CCCCHHHHHHHHHhc-CCCeEEEEEEcC-CCccccccCHHHHHHHHH-HcCCEEEEEccccccccCCCCCC-
Q 001990 706 SVGTDAK-GNINIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEEGIDEICKIIH-DNGGQVYMDGANMNAQVGLTSPG- 780 (985)
Q Consensus 706 ~v~~~~~-g~iDle~L~~~i~~~-~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~-~~g~lliVD~a~~~~~~g~~~~g- 780 (985)
.++.+++ ..+|+++|++++++. .+++++|++++| |++|.+- +.+++.++++ .+|+++++|+++.. +.....+.
T Consensus 142 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~~~~~iI~De~Y~~-~~~~~~~~~ 219 (374)
T PRK02610 142 RVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLPEDILVVIDEAYFE-FSQTTLVGE 219 (374)
T ss_pred EecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhccCCcEEEEeccccc-cCccchHHH
Confidence 9998653 689999999998731 147899999999 5799997 4444444432 14899999998742 11110110
Q ss_pred -cCCCc-EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHH
Q 001990 781 -YIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 781 -~~g~D-i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a 858 (985)
..... +++.|+.|+|+. .|.++|++++++++++.+.... ...+++ ...+. ++.+
T Consensus 220 ~~~~~~~ivi~SfSK~~g~----~GlRiG~~v~~~~l~~~l~~~~--------------~~~~~~--~~~q~----a~~~ 275 (374)
T PRK02610 220 LAQHPNWVILRTFSKAFRL----AAHRVGYAIGHPELIAVLEKVR--------------LPYNLP--SFSQL----AAQL 275 (374)
T ss_pred HhcCCCEEEEEecchhccC----cccceeeeecCHHHHHHHHHhc--------------CCCCCC--HHHHH----HHHH
Confidence 11112 566777787754 4789999999877665442110 000111 11111 1122
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC
Q 001990 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (985)
Q Consensus 859 ~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~ 938 (985)
++. ..+.+.+..++..+..+.+.+.|++...+....+ +..+ +.++++ .+.+..++.+.|.++||.+...
T Consensus 276 ~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~-~g~f--~~~~l~-----~~~~~~~~~~~l~~~gi~v~~~- 344 (374)
T PRK02610 276 ALE--HRQELLAAIPEILQERDRLYQALQELPQLRVWPS-AANF--LYLRLS-----QDAALAALHQALKAQGTLVRHT- 344 (374)
T ss_pred Hhc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCC-cceE--EEEeCC-----CCCCHHHHHHHHHHCCEEEEeC-
Confidence 222 1123333334444455667777765212222121 2222 335553 1356788999999999987532
Q ss_pred CCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 939 WPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 939 ~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+.+|++++ +.++++ ++++.|++++..
T Consensus 345 ---~~~lRls~~---~~~~~~---~~l~~l~~~l~~ 371 (374)
T PRK02610 345 ---GGGLRITIG---TPEENQ---RTLERLQAALTQ 371 (374)
T ss_pred ---CCeEEEeCC---CHHHHH---HHHHHHHHHHhh
Confidence 478999985 467788 999988887654
No 461
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=7.9e-13 Score=151.33 Aligned_cols=278 Identities=14% Similarity=0.140 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC--C
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--K 712 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~--~ 712 (985)
.++++.+++.++.+..++..+.|++. +..++++.+. .++++|+++++.+..+...+...|.+++.++.+. +
T Consensus 68 ~~lr~~ia~~~~~~~~~I~it~G~~~--al~~~~~~~~-----~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~ 140 (357)
T PRK14809 68 ADLTAALADRWDVSPEQVWLANGGDG--ALDYLARAML-----DPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADD 140 (357)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcC
Confidence 46888889999988876666666542 2223333321 4678999999866555555678899999998853 3
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEEccccccccCCCCC-C--cCCCc-
Q 001990 713 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP-G--YIGAD- 785 (985)
Q Consensus 713 g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~--g~lliVD~a~~~~~~g~~~~-g--~~g~D- 785 (985)
..+|++++++.. +++++|++++| |++|.+- +.+++.++++.. ++++++|+++..-... ..+ . ...-.
T Consensus 141 ~~~~~~~~~~~~----~~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~v 214 (357)
T PRK14809 141 FEQTADTVLDAY----DGERIVYLTSPHNPTGSEI-PLDEVEALAERTDEETLVVVDEAYGEFAER-PSAVALVEERDDV 214 (357)
T ss_pred CCcCHHHHHHhh----cCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCccCcEEEEechhhhccCC-chhHHHHhhCCCE
Confidence 567888877654 35788999999 5799997 666666666543 7899999987421110 000 0 01112
Q ss_pred EEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhch
Q 001990 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (985)
Q Consensus 786 i~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~ 865 (985)
+++.|+.|+|++ .|.++|++++++++.+.+.... . +.+.+ .....++ +..+..
T Consensus 215 i~~~SfSK~~~~----~GlRiG~~~~~~~~~~~~~~~~--------------~--~~~~~----~~~~~~a---~~~l~~ 267 (357)
T PRK14809 215 AVLRTFSKAYGL----AGLRLGYAVVPEEWADAYARVN--------------T--PFAAS----ELACRAG---LAALDD 267 (357)
T ss_pred EEEecchhHhcC----cchhheeeecCHHHHHHHHHhC--------------C--CCCCC----HHHHHHH---HHHhCC
Confidence 556777888754 4788999999877665442110 0 11111 1111112 222222
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCC-CCCCC
Q 001990 866 KG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPG 943 (985)
Q Consensus 866 ~g-l~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~-~pv~~ 943 (985)
++ +.+..+....+.+++.+.|... .++ +.+.+ +.+++. +..++.+.|.++||.+.... +..++
T Consensus 268 ~~~~~~~~~~~~~~r~~l~~~L~~~---~~~-~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~g~~f~~~~ 332 (357)
T PRK14809 268 DEHVERTVETARWAREYIREELDAP---TWE-SAGNF---VLAEVG--------DASAVAEAAQERGVIVRDCTSFGLPE 332 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc---cCC-CCCCE---EEEECC--------CHHHHHHHHHHCCEEEEECccCCCCC
Confidence 33 3333444455556666766541 121 12222 234432 46788999999999875332 33357
Q ss_pred EEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 944 TLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 944 ~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.+|+++. +.++++ ++++.|+++++
T Consensus 333 ~iRls~~---~~~~~~---~~l~~L~~~l~ 356 (357)
T PRK14809 333 CIRITCG---TREETE---RAVEVLNEVLA 356 (357)
T ss_pred eEEEecC---CHHHHH---HHHHHHHHHhc
Confidence 8999974 578999 99999887653
No 462
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.54 E-value=3.1e-12 Score=150.66 Aligned_cols=304 Identities=15% Similarity=0.139 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCcHHHHHhcCc-------
Q 001990 633 MFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 702 (985)
Q Consensus 633 ~~~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv-~~~~Hg~~~~~~~~~G~------- 702 (985)
...++.+.|+++++.. ...++.+||+++++++++.+|.|. ++.+||. ...+||....++...|-
T Consensus 98 ~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 171 (451)
T PRK06918 98 PYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYT------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFG 171 (451)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHh------CCCcEEEECCCcCccchhhhhhcCCCcccccc
Confidence 3557888899988532 245788999999999999988762 4455664 66899988766543221
Q ss_pred ------EEEEEeCCC-----CCCCC-------HHHHHHHHHh--cCCCeEEEEEEcCC-Ccccccc---CHHHHHHHHHH
Q 001990 703 ------KIVSVGTDA-----KGNIN-------IEELRKAAEA--NRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHD 758 (985)
Q Consensus 703 ------~v~~v~~~~-----~g~iD-------le~L~~~i~~--~~~~t~~Vvi~~pn-~~G~i~~---di~eI~~la~~ 758 (985)
.+..+|... .+..+ ++.+++.+.. +.+++++|+++-.. ..|.+.+ .+++|.++|++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~ 251 (451)
T PRK06918 172 FGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSE 251 (451)
T ss_pred CCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHH
Confidence 123333311 11101 2234444421 23577888775433 3565542 28999999999
Q ss_pred cCCEEEEEccccccc--cC-CCCCCcCC--CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCC
Q 001990 759 NGGQVYMDGANMNAQ--VG-LTSPGYIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 833 (985)
Q Consensus 759 ~g~lliVD~a~~~~~--~g-~~~~g~~g--~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~ 833 (985)
||+++|.|+++. ++ .+ +.....++ +|++++ .|.++ +|..+|++++++++.+.+.....
T Consensus 252 ~gillI~DEV~t-g~gr~g~~~a~~~~~v~pDi~t~--sK~l~-----~G~pig~v~~~~~i~~~~~~~~~--------- 314 (451)
T PRK06918 252 HGILFVADEIQT-GFARTGKYFAIEHFDVVPDLITV--SKSLG-----AGVPISGVIGRKEIMDESAPGEL--------- 314 (451)
T ss_pred cCCEEEEecccc-CcCccCceehhHhcCCCCCEEee--ehhhc-----CCCccEEEEEcHHHHhccCCCCc---------
Confidence 999999999873 22 11 00111233 787654 57774 45678999998877655421100
Q ss_pred CCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--EcCCCCceeEEEEEE
Q 001990 834 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVD 908 (985)
Q Consensus 834 ~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~---~~i~--~~g~~~~~~~~~vv~ 908 (985)
.. ++.|+++.++++.+.+..+..+++.+ +.....++++++|++. ++.. ..+. +. +..+.+.
T Consensus 315 -----~~----T~~g~~l~~aaa~a~l~~i~~~~~~~---~~~~~g~~l~~~l~~l~~~~~~~~~vrg~-G~-~~~~~~~ 380 (451)
T PRK06918 315 -----GG----TYAGSPLGCAAALAVLDIIEKENLND---RAIELGKVVMNRFEEMKNKYNCIGDVRGL-GA-MCAFELV 380 (451)
T ss_pred -----Cc----CCCcCHHHHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHHHHhhCCCceeeccc-ee-EEEEEEc
Confidence 01 12234555666667777765555443 4445556777777642 2221 1222 21 1112121
Q ss_pred ecC-ccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHH
Q 001990 909 LRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTF 977 (985)
Q Consensus 909 ~~~-~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~ 977 (985)
.+. .+.........+.+.|.++|+.+.... ...+.+|++|+...|++||| +++++|.++++++.+
T Consensus 381 ~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~-~~~~~lrl~p~l~~t~~~id---~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 381 QDRKTKEPDKTLTANICKEANKRGLLLLSAG-TYGNVIRVLMPLVITDEQLE---EGLTIIEESLQACYE 446 (451)
T ss_pred cCCCcCCCcHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEECCCccCHHHHH---HHHHHHHHHHHHHHH
Confidence 010 000001124567777889999874321 11378999999889999999 999999999887643
No 463
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.54 E-value=1e-12 Score=149.12 Aligned_cols=273 Identities=14% Similarity=0.065 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhCCCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCC
Q 001990 635 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (985)
Q Consensus 635 ~el~~~la~l~G~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g 713 (985)
.++++.+++.+|.+. .++..++|++.....+ .+ .. .+++ |+++.+.+..+...++..|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l--~~-~~-----~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL--PA-LL-----PRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH--HH-hc-----CCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--
Confidence 478899999999974 5666666655221222 22 11 2444 88888766666666788999998887642
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccccCCCCCCcC-CCc--EE
Q 001990 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VC 787 (985)
Q Consensus 714 ~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~-g~D--i~ 787 (985)
+. +. +.++++++++| |++|.+-+ .+++|++.|.+++.++++|+++.... .......+ ..+ ++
T Consensus 125 ----~~----~~---~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~-~~~s~~~~~~~~~vi~ 192 (339)
T PRK06959 125 ----DT----LP---AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTL-PAASLAAHTDRPGLVV 192 (339)
T ss_pred ----hh----cc---ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCC-CcccchhccCCCCEEE
Confidence 22 22 34567899999 57999861 24455555667899999999874321 10111111 112 55
Q ss_pred EeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+.|+.|.|+ ..|.++|++++++++++.+.... ...++++ ....++.+++ ....
T Consensus 193 l~SfSK~~g----l~GlRiGy~v~~~~li~~l~~~~--------------~~~~vs~------~~q~a~~~~L---~~~~ 245 (339)
T PRK06959 193 LRSVGKFFG----LAGVRAGFVLAAPALLAALRDAL--------------GAWTVSG------PARHAVRAAF---ADAA 245 (339)
T ss_pred EecChhhcC----CcchheEEEecCHHHHHHHHHhc--------------CCCCCcH------HHHHHHHHHh---CcHH
Confidence 666667664 45789999999887766543210 0011111 1111222333 2222
Q ss_pred -HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEE
Q 001990 868 -LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (985)
Q Consensus 868 -l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~l 945 (985)
.++..+...++.+++.+.|++ ++.+. . ... .+.++++ +..++.+.|.++||.+..+. ..+++
T Consensus 246 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~-~---~~~--f~~~~~~--------~~~~l~~~l~~~GI~vr~~~--~~~~l 309 (339)
T PRK06959 246 WQAAMRERLAADGARLAALLRAHGFAVH-A---TPL--FSWTDDP--------RAAALHAALARRGIWTRYFA--PPPSV 309 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcc-C---cce--EEEEeCC--------CHHHHHHHHHhCCeEEEECC--CCCeE
Confidence 334445566777889999987 44432 1 111 1223432 46789999999999986432 24789
Q ss_pred EEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 946 MIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 946 ris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
||+++ .+.+|++ +|+++|+++.+.+..+
T Consensus 310 Risi~--~~~~e~~---~l~~al~~~~~~~~~~ 337 (339)
T PRK06959 310 RFGLP--ADEAEWQ---RLEDALAECVPTLAAA 337 (339)
T ss_pred EEECC--CCHHHHH---HHHHHHHHHHHHHhhc
Confidence 99963 4778999 9999999988876643
No 464
>PRK05839 hypothetical protein; Provisional
Probab=99.53 E-value=1e-12 Score=151.28 Aligned_cols=322 Identities=11% Similarity=-0.002 Sum_probs=180.6
Q ss_pred ccccccceecccCcccccccc--ccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhCC--CccceecChHHHHHHHHH
Q 001990 590 SMIPLGSCTMKLNATTEMMPV--TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGL 665 (985)
Q Consensus 590 ~~~~lGs~~~~~~~~~~~~~~--~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G~--~~~~~~~~sGa~g~~a~l 665 (985)
.++.|+.+.+.++........ ..... .+.|.+ .+|..++.+.+++++++.+|. +..+++.++|++.. ..
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~---~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a--l~ 97 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPK---SAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV--LF 97 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH--HH
Confidence 467777766655543221111 11111 222332 357667777778888888784 45566666666522 11
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCc
Q 001990 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STH 742 (985)
Q Consensus 666 ~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~--g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~ 742 (985)
.+++.+. . ..+++.|+++.+.+..+...+...|++++.++.+.+ ..+|+++. .+ +++++|++++| |++
T Consensus 98 ~~~~~~~-~--~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~----~~~k~v~i~nP~NPT 168 (374)
T PRK05839 98 NFPQFVL-F--DKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL----QEVDLVILNSPNNPT 168 (374)
T ss_pred HHHHHHh-c--CCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh----ccccEEEEeCCCCCc
Confidence 2222211 0 125688999988777777778899999999998754 34554433 23 46889999999 579
Q ss_pred cccc--cCHHHHHHHHHHcCCEEEEEcccccccc--CCCCCC---------cCCCcEEEeCCcccccccCCCCCCcceee
Q 001990 743 GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV--GLTSPG---------YIGADVCHLNLHKTFCIPHGGGGPGMGPI 809 (985)
Q Consensus 743 G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~--g~~~~g---------~~g~Di~~~s~hKtl~~p~g~GGPg~G~l 809 (985)
|.+- ..+++|+++|+++|+++++|+++..-.. ...... ..+-=+++.|+.|+|+. .|.++|++
T Consensus 169 G~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~i 244 (374)
T PRK05839 169 GRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSA----PGLRSGFI 244 (374)
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCC----ccceeEEE
Confidence 9986 2588888999999999999998742110 110000 00112556777787754 57899999
Q ss_pred eecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001990 810 GVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (985)
Q Consensus 810 ~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~ 889 (985)
++++++...+.... .....++++ ..+. ++...+ ...+-+.+..++..++.+.+.+.|.
T Consensus 245 i~~~~~~~~~~~~~------------~~~~~~~~~--~~q~----~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~l~-- 302 (374)
T PRK05839 245 AGDASILKKYKAYR------------TYLGCASPL--PLQK----AAAVAW--LDDEHAEFFRNIYAKNLKLAREILG-- 302 (374)
T ss_pred ecCHHHHHHHHHHH------------hhcCCCCCh--HHHH----HHHHHh--ccchHHHHHHHHHHHHHHHHHHhcC--
Confidence 99877655432100 000001111 0011 111111 1122233334444455555555442
Q ss_pred CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH-CCCccCCCC-CC----CCCEEEEeccCCCCHHhhchHHH
Q 001990 890 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMS-WP----VPGTLMIEPTESESKVCHNREDL 963 (985)
Q Consensus 890 ~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e-~Gi~~~~~~-~p----v~~~lris~t~~~t~eeId~~~~ 963 (985)
+.. +.+..+ +.++++ +..+++++|.+ +||.+.... +. .++++|++++. +++++. +
T Consensus 303 --~~~--p~gg~f--i~~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~---~ 363 (374)
T PRK05839 303 --ITI--PPATFY--VWLPVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLE---K 363 (374)
T ss_pred --CCC--CCeeEE--EEEeCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHH---H
Confidence 111 112111 234442 35678888875 899874321 21 24899999863 578888 8
Q ss_pred HHHHHHHHH
Q 001990 964 FFQILLSLT 972 (985)
Q Consensus 964 ~i~aL~~i~ 972 (985)
.++.|++++
T Consensus 364 ~l~~l~~~l 372 (374)
T PRK05839 364 ALEIIKTYL 372 (374)
T ss_pred HHHHHHHHh
Confidence 887777664
No 465
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.53 E-value=1e-12 Score=151.66 Aligned_cols=290 Identities=14% Similarity=0.115 Sum_probs=181.0
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc----
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~---- 288 (985)
..++++.+|+++|.+. +..+.+||.++..++.++.+. +||+|+++...|+++...++ ..|++++++|.
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGVG--PGDRVWTTPITFVATANCAL----YCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHH----HcCCEEEEEecCCCc
Confidence 3457889999999865 556778898888777766443 88999999999998887754 46888888764
Q ss_pred -----hhhhc-cC----CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccc----eEEEe
Q 001990 289 -----KDIDY-KS----GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA----DIVVG 354 (985)
Q Consensus 289 -----~~l~~-l~----~~t~~V~v~~pn~~G~i~dl~~I~~~a~~~galliV~a~~~alg~l~~p~~~Ga----Di~v~ 354 (985)
+++++ ++ ++|++|++++ ++|...|+++|.++|+++|+++++|+ .+++|..-....+|. |++++
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~~~~~i~~l~~~~~~~lI~D~-a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSVDMQAIAALAKKHGLKIIEDA-SHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccCCHHHHHHHHHHcCCEEEEEC-CCcccCccCCEeCCCccccceEEE
Confidence 34555 66 6899998776 47999999999999999999999953 456654322334555 99999
Q ss_pred cC---ccccccCCCCCCceEEEEE-chhhHhcCCC-ceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHH
Q 001990 355 SA---QRFGVPMGYGGPHAAFLAT-SQEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (985)
Q Consensus 355 s~---k~lg~P~~~GGP~~G~l~~-~~~~~~~lp~-~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~ 429 (985)
|. |+++.+ ..|++.+ ++++.+++.. +.-|+..+... + .... ......+.++ +..+..+..+
T Consensus 180 S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~---~-~~~~--~~~~~~~~~~--~g~n~~m~~l 245 (380)
T TIGR03588 180 SFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLL---F-EKQD--EGPWYYEQQE--LGFNYRMTDI 245 (380)
T ss_pred ecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCccc---c-cccc--cCcceeeeec--cccccCccHH
Confidence 96 455422 2244544 4555554421 11121111000 0 0000 0000111111 0001111222
Q ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C---cc--eEEEec-C-C-HHHHHHHHHHcCcee
Q 001990 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F---FD--TVKVKC-A-D-AHAIASAAYKIEMNL 499 (985)
Q Consensus 430 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~---~~--~~~i~~-~-~-~~~l~~~L~~~Gi~~ 499 (985)
.|++-+.. -+.++++.++-.++++++.+.|++++++++...+ . .. .+.+.. . . ..++.+.|.++||.+
T Consensus 246 ~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 246 QAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 33331111 1346788888899999999999988646644221 0 11 233332 1 2 789999999999965
Q ss_pred eeec-------------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 500 RVVD-------------------------SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 500 ~~~~-------------------------~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+... ...+.+.++...|++|+++++++|+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 3110 15588889999999999999999874
No 466
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.53 E-value=3.8e-13 Score=145.28 Aligned_cols=343 Identities=17% Similarity=0.213 Sum_probs=204.1
Q ss_pred CCHHHHHHHHHHHhcCccCcCcccccccceecccCcccccccc-ccccccccCCCCcchhhhcHHHHHHHHHHHHHHHhC
Q 001990 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPV-TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (985)
Q Consensus 568 ~se~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~-~~~~f~~~~p~~p~e~~~G~~~~~~el~~~la~l~G 646 (985)
+-+++-.|||+..+..- ...+|+|++++++..+.|.. -|..|..|.. .| +.++.+.|.+++-
T Consensus 44 lyDe~G~ryLD~f~Gi~------tvslGHchP~v~~a~~kQl~~l~H~t~~~~~-~p----------i~~~Ae~L~s~~P 106 (442)
T KOG1404|consen 44 LYDEEGRRYLDAFGGIV------TVSLGHCHPDVVAAAVKQLKKLYHTTSGYLN-PP----------IHDLAEALVSKLP 106 (442)
T ss_pred EEcCCCceeehhhCCeE------EEEcCCCChHHHHHHHHhhhhhEEeeccccC-Cc----------HHHHHHHHHHhCC
Confidence 45567778888766543 24689999999987776652 2323333321 12 5578888887764
Q ss_pred CCc-cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCcHHHHHhcCcEEEEEeCC-----------CC-
Q 001990 647 FDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVSVGTD-----------AK- 712 (985)
Q Consensus 647 ~~~-~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vl-v~~~~Hg~~~~~~~~~G~~v~~v~~~-----------~~- 712 (985)
-+- +.++.|||+++++.+++++|.|. ..-+|| ...++||..+.++.+.|......+.+ ++
T Consensus 107 ~~l~~vfF~nsGsEANelal~mar~Yt------~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp 180 (442)
T KOG1404|consen 107 GDLKVVFFVNSGSEANELALKMARLYT------GNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDP 180 (442)
T ss_pred CCceEEEEecCCchHHHHHHHHHHHhc------CCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCc
Confidence 443 45888999999999999999883 333466 46788998776654433322222111 11
Q ss_pred ------CC-----CC--HHHHHHHHHhcCCC-eEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEcccccccc
Q 001990 713 ------GN-----IN--IEELRKAAEANRDN-LSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 774 (985)
Q Consensus 713 ------g~-----iD--le~L~~~i~~~~~~-t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~a~~~~~~ 774 (985)
+. .| .+++++.+....+. +++.+++.. ...|++++ -+++..++|+++|.++|.|++| .
T Consensus 181 ~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVq----t 256 (442)
T KOG1404|consen 181 YRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQ----T 256 (442)
T ss_pred ccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhh----h
Confidence 11 01 24444455333344 444554443 35688873 3899999999999999999886 4
Q ss_pred CCCCCCc-CC-------CcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCccccc
Q 001990 775 GLTSPGY-IG-------ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (985)
Q Consensus 775 g~~~~g~-~g-------~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~ 846 (985)
|+.+.|. || +||++. .|.+ |.| ..+|.+++.+++..-+...... .+ ++
T Consensus 257 GfGRtG~~wgfe~h~v~PDIvTm--AKgi----GnG-~Pl~AVvtt~EIa~v~~~~~~~--------------fn---Ty 312 (442)
T KOG1404|consen 257 GFGRTGHMWGFESHGVVPDIVTM--AKGI----GNG-FPLGAVVTTPEIADVLNQKSSH--------------FN---TY 312 (442)
T ss_pred ccccccccccccccCCCccHHHH--Hhhc----cCC-CcceeeecCHHHHHHHHhcccc--------------cc---cc
Confidence 5555553 33 577643 3655 444 4466677777766443221100 11 13
Q ss_pred chhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCeeEcCCC-Cc-eeEEEEEEecCccccCCCCHH
Q 001990 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPILFRGVN-GT-VAHEFIVDLRGLKNTAGIEPE 921 (985)
Q Consensus 847 ~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~~~g~~-~~-~~~~~vv~~~~~~~~~g~~~~ 921 (985)
.|++..++++.+.+..+.++.+.+ +..+...||.++|.+ ..+++-.-+. +- ...+++-+-...+........
T Consensus 313 ggnP~a~avg~aVL~Vikee~LqE---~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~ 389 (442)
T KOG1404|consen 313 GGNPVACAVGLAVLKVIKEENLQE---NAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGA 389 (442)
T ss_pred CCCchhHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHH
Confidence 345666677788888887775554 555677899998875 3344321111 11 112222221000000112345
Q ss_pred HHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 922 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 922 ~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
.+.+.+.+.|+.++..... .+.+||+|....|+|||| .+++..
T Consensus 390 ~i~~~cke~Gvlvg~g~i~-G~vfriaPPlciT~edi~---f~~~~~ 432 (442)
T KOG1404|consen 390 VIGEQCKELGVLVGKGGIH-GNVFRIAPPLCITKEDID---FAVEYF 432 (442)
T ss_pred HHHHHHHHhCeeeeccccc-ceEEEecCCeeccHHHHH---HHHHHH
Confidence 6788899999998532211 368999999999999998 666644
No 467
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.53 E-value=7.1e-13 Score=154.25 Aligned_cols=300 Identities=11% Similarity=0.081 Sum_probs=170.8
Q ss_pred hhcHHHHHHHHHHHHHHHhC--CCcccee---cChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcC
Q 001990 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G--~~~~~~~---~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G 701 (985)
.+|..++.+.+.+++.+..+ .+...+. +.+|+++...++++++.+. .++|+|+++++.+..+...++..|
T Consensus 71 ~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G 145 (404)
T PTZ00376 71 IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAG 145 (404)
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcC
Confidence 46765555555544433222 2223343 4444445444444343331 477899999998877777889999
Q ss_pred cEEEEEeCC--CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-C
Q 001990 702 MKIVSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G 775 (985)
Q Consensus 702 ~~v~~v~~~--~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g 775 (985)
++++.+|.. +++.+|++.+++++.++.++++++++++| |++|.+- +.+++|+++|++||+++++|.++..-.. +
T Consensus 146 ~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 225 (404)
T PTZ00376 146 LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGD 225 (404)
T ss_pred CceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCC
Confidence 999999983 24789999999999754345677777888 6899985 2588899999999999999998631110 0
Q ss_pred C----CCC---CcCCCc-EEEeCCcccccccCCCCCCcceeee---ecccccCcCCCCccccCCCCCCCCCCCCCCCccc
Q 001990 776 L----TSP---GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (985)
Q Consensus 776 ~----~~~---g~~g~D-i~~~s~hKtl~~p~g~GGPg~G~l~---~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s 844 (985)
. ... ...+.. +++.|+.|+|++| |.++|++. .++++.+.+....... ......+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~----GlRvG~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~- 292 (404)
T PTZ00376 226 LDKDAYAIRLFAERGVEFLVAQSFSKNMGLY----GERIGALHIVCANKEEAANVLSQLKLI--------IRPMYSSPP- 292 (404)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCccccc----ccccceEEEEeCCHHHHHHHHHHHHHH--------HhhhcCCCc-
Confidence 0 000 011112 6678888888654 78999983 4554332211000000 000000111
Q ss_pred ccchhhhHHHHHHHHHHHhch------hhHHHHHHHHHHHHHHHHHHHhc-cCC--eeEcCCCCceeEEEEEEecCcccc
Q 001990 845 APWGSALILPISYTYIAMMGS------KGLTEASKIAILNANYMAKRLEK-HYP--ILFRGVNGTVAHEFIVDLRGLKNT 915 (985)
Q Consensus 845 ~~~g~~~~~~~A~a~l~~lg~------~gl~~~~~~~~~~a~~l~~~L~~-~~~--i~~~g~~~~~~~~~vv~~~~~~~~ 915 (985)
.....++..++.. +. +-+++..++..++.+.+.+.|++ ++. ..+..+++.+ + +-++
T Consensus 293 -----~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~---f-~~~~----- 357 (404)
T PTZ00376 293 -----IHGARIADRILSD-PELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGM---F-SFTG----- 357 (404)
T ss_pred -----hHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceE---E-EecC-----
Confidence 0111111122211 10 11233344556777888888876 222 1111122211 1 1111
Q ss_pred CCCCHHHHHHHHHHC-CCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 916 AGIEPEDVAKRLMDY-GFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 916 ~g~~~~~l~~~L~e~-Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.+ .+++++|.++ ||.+.. +. ||+++. .++++++ .+++.|++++.
T Consensus 358 --~~-~~~~~~L~~~~~v~v~p------~~-Ris~~~-~~~~~~~---~~~~~l~~~~~ 402 (404)
T PTZ00376 358 --LT-KEQVERLIEKYHIYLLD------NG-RISVAG-LTSKNVD---YVAEAIHDVVR 402 (404)
T ss_pred --CC-HHHHHHHHHhCCEeecC------CC-eEEEec-cCHHhHH---HHHHHHHHHHh
Confidence 22 4678888766 987631 22 888854 6788999 99999998754
No 468
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=1.3e-12 Score=150.05 Aligned_cols=209 Identities=22% Similarity=0.182 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC-cHH---HHHhcCcEEEEEe
Q 001990 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPA---TAAMCGMKIVSVG 708 (985)
Q Consensus 633 ~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~-~~~---~~~~~G~~v~~v~ 708 (985)
...++++.++++.|.+.. +.+++|+.+..++ +++ . .++++||+++..|+. +.. .+...|++++.++
T Consensus 51 ~~~~Le~~lA~l~g~~~~-~~~~sG~aai~~~-~~~---l-----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 120 (377)
T PRK07671 51 TRAALEELIAVLEGGHAG-FAFGSGMAAITAV-MML---F-----SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred HHHHHHHHHHHHhCCCce-EEeCCHHHHHHHH-HHH---h-----CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence 366899999999998775 5566776544222 211 1 367899998887763 322 2345799999887
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEE
Q 001990 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (985)
Q Consensus 709 ~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~ 787 (985)
. .|+++++++++ ++|++|++++| |++|.+. |+++|+++|+++|+++++|+++.... ...|..+|+|++
T Consensus 121 ~-----~d~~~l~~ai~---~~tklV~le~P~NPtg~~~-dl~~I~~la~~~g~~lvvD~a~~~~~--~~~p~~~g~Div 189 (377)
T PRK07671 121 T-----SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT-DIKKISTIAKEKGLLTIVDNTFMTPY--WQSPISLGADIV 189 (377)
T ss_pred C-----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCCccc--cCChhhhCCeEE
Confidence 5 38999999997 78999999999 5789987 89999999999999999999875322 234557899999
Q ss_pred EeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchh
Q 001990 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (985)
Q Consensus 788 ~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~ 866 (985)
+.|++|+|+.|.+ -..|+++++ +++.+.+.. . + ..++...+ ...||.. ..|.+
T Consensus 190 v~S~sK~l~G~~~---~~~G~~v~~~~~l~~~~~~-~-----------~-~~~g~~~~--------~~~a~l~--~~~l~ 243 (377)
T PRK07671 190 LHSATKYLGGHSD---VVAGLVVVNSPELAEDLHF-V-----------Q-NSTGGILG--------PQDSWLL--LRGLK 243 (377)
T ss_pred EecCcccccCCcc---ceeEEEEeCcHHHHHHHHH-H-----------H-HhhcCCCC--------HHHHHHH--HcCcC
Confidence 9999999852211 124666665 344433210 0 0 00011111 1123333 33444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001990 867 GLTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 867 gl~~~~~~~~~~a~~l~~~L~~ 888 (985)
.+..+.++..+++..+.+.|++
T Consensus 244 tl~~R~~~~~~na~~la~~L~~ 265 (377)
T PRK07671 244 TLGIRMEEHETNSRAIAEFLNN 265 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHc
Confidence 4556677788999999999986
No 469
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.52 E-value=2.4e-12 Score=149.02 Aligned_cols=303 Identities=17% Similarity=0.188 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC--
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~-- 711 (985)
+.++++.+++++|.+.+ +.+++|+.|+..+++++. +++|+| ++.+.+.++...+.+.|.+++.+++++
T Consensus 55 ~~~Leeaia~~~g~~~v-v~t~~Gt~Al~la~~al~--------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~ 124 (431)
T cd00617 55 FYDLEDAVQDLFGFKHI-IPTHQGRGAENILFSILL--------KPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAH 124 (431)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHHHHHHhC--------CCCCEE-ccCCcccchHHHHHhCCCEeEEEeccccc
Confidence 45788999999999864 667778877755544431 467866 565544455556788999999999863
Q ss_pred --------CCCCCHHHHHHHHHhc-CCCeEEEEEEcCC-Cc-cccc--cCHHHHHHHHHHcCCEEEEEcccccc--cc--
Q 001990 712 --------KGNINIEELRKAAEAN-RDNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMNA--QV-- 774 (985)
Q Consensus 712 --------~g~iDle~L~~~i~~~-~~~t~~Vvi~~pn-~~-G~i~--~di~eI~~la~~~g~lliVD~a~~~~--~~-- 774 (985)
.|.+|+++|+++|++. .+++++|++++|| .+ |..- .++++|+++|++||+++|.|+|++.. ..
T Consensus 125 ~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 125 DAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIK 204 (431)
T ss_pred ccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhh
Confidence 2569999999999843 2348889999985 44 6664 24788999999999999999997532 11
Q ss_pred ----CCC--CCCc------CCCcEEEeCCcccccccCCCCCCcceeeeecc-cccCcCCCCccccCCCCCCCCCCCCCCC
Q 001990 775 ----GLT--SPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (985)
Q Consensus 775 ----g~~--~~g~------~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~~g~~~~~~~~~~~~~t~~ 841 (985)
+.. .+++ ...|.+++|+||.++ +|-+|++++++ ++...+....+.. .+ .
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~------~~~GG~i~~~d~~l~~~~~~~~~~~----------~~--~ 266 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGL------VNIGGFLALRDDELYEEARQRVVLY----------EG--F 266 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCC------CccceEEEeCcHHHHHHHHHhcccc----------CC--c
Confidence 111 1111 147999999999874 34457888886 4665543211000 00 0
Q ss_pred cccccchhhhHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccc---cC
Q 001990 842 IAAAPWGSALILPISYT-YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKN---TA 916 (985)
Q Consensus 842 i~s~~~g~~~~~~~A~a-~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~---~~ 916 (985)
+. ..|....-..|.+ .|....+ . +..+...+++++|.+.|++ |+.+..+ .+ .|.+.+|.+.+.. ..
T Consensus 267 ~~--~gG~~~r~~~A~A~gL~e~~~--~-~~l~~~~~~r~~l~~~L~~~G~~v~~P--~G--gh~v~~d~~~~~~~~~~~ 337 (431)
T cd00617 267 VT--YGGMAGRDMEALAQGLREAVE--E-DYLRHRVEQVRYLGDRLDEAGVPIVEP--AG--GHAVFIDAREFLPHIPQE 337 (431)
T ss_pred cc--cccccHHHHHHHHHHHHhccc--H-HHHHHHHHHHHHHHHHHHHCCCCccCC--Cc--ceEEEEEhHHhcCCCCcc
Confidence 00 0011111111111 2221111 1 2233445566999999987 7765432 22 2345677653210 01
Q ss_pred CCCHHHHHHHHH-HCCCccC---CCC---CC--------CCCEEEEeccC-CCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 917 GIEPEDVAKRLM-DYGFHGP---TMS---WP--------VPGTLMIEPTE-SESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 917 g~~~~~l~~~L~-e~Gi~~~---~~~---~p--------v~~~lris~t~-~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+.+..+++..|. +.||.+. .+. .| ..+.+|+.+.. .-|.+++| ..+++|..+.++..
T Consensus 338 ~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~---~~~~~~~~~~~~~~ 410 (431)
T cd00617 338 QFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMD---YVAAAVIALYERRE 410 (431)
T ss_pred cCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHH---HHHHHHHHHHhhHh
Confidence 235778886665 5578742 221 11 13678998775 56899999 99999999887643
No 470
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=5e-12 Score=144.49 Aligned_cols=268 Identities=14% Similarity=0.109 Sum_probs=178.7
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch-----
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----- 289 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~----- 289 (985)
++++.+|++++.++.++.++.|++.++..++.++. . +||+|++++-.|+.+...+ +..|++++.++.+
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~-~--~gd~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF-N--HDRPLLFPDITYSFYPVYA----GLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-C--CCCEEEEeCCCHHHHHHHH----HHcCCEEEEeecCCCCCC
Confidence 67789999999999999999999987776665542 3 8899999998887766554 3468888887653
Q ss_pred hhhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC-CcEEEEEeccccccC---CCCCCcccceEEEecC-ccccccC
Q 001990 290 DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTI---LKPPGELGADIVVGSA-QRFGVPM 363 (985)
Q Consensus 290 ~l~~l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~~-galliV~a~~~alg~---l~~p~~~GaDi~v~s~-k~lg~P~ 363 (985)
+++++..++++|++.+| |++|.+.+.+++.++++.+ |+++++|.....++. +.......-.++++|. |.|+.|
T Consensus 137 d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 215 (353)
T PRK05387 137 DVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLA- 215 (353)
T ss_pred CHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcch-
Confidence 12223345678888888 6899999999999999876 888888521111211 0001123446888886 888654
Q ss_pred CCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCC-CccchhHHHHHHHHHHHHHcCcch
Q 001990 364 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS-NICTAQALLANMAAMYAVYHGPEG 442 (985)
Q Consensus 364 ~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~ats-ni~t~~~l~a~~aa~y~~~~g~~G 442 (985)
|..+||+++++++++.+.. .+... ..+. +.+ +..++.. .+...+.
T Consensus 216 ---GlR~G~~~~~~~~~~~l~~----------------------------~~~~~~~~~~-~~~-~q~~~~~-~l~~~~~ 261 (353)
T PRK05387 216 ---GLRVGFAIGHPELIEALNR----------------------------VKNSFNSYPL-DRL-AQAGAIA-AIEDEAY 261 (353)
T ss_pred ---hhhceeeecCHHHHHHHHH----------------------------hhccCCCCCc-CHH-HHHHHHH-HhcCHHH
Confidence 3457999888777665410 00000 1111 111 1112111 1222344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC--HHHHHHHHHHcCceeeeec----CCeEEEEeccCCC
Q 001990 443 LKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTT 516 (985)
Q Consensus 443 l~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~l~~~L~~~Gi~~~~~~----~~~lris~~~~~t 516 (985)
+++..++..++.+++.+.|+++| +++.+.. ..-+.+..++ ..++.+.|.++||.++... .+.+|++++ +
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~ 336 (353)
T PRK05387 262 FEETRAKVIATRERLVEELEALG-FEVLPSK-ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---T 336 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC-CeECCCc-CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---C
Confidence 67788888889999999999987 8765321 1123345543 7889999999999885432 468999987 6
Q ss_pred HHHHHHHHHHHhC
Q 001990 517 LEDVDKLFIVFAG 529 (985)
Q Consensus 517 ~edid~ll~~l~~ 529 (985)
.+++++++++|..
T Consensus 337 ~~~~~~~~~~L~~ 349 (353)
T PRK05387 337 DEEMEALVDALKE 349 (353)
T ss_pred HHHHHHHHHHHHH
Confidence 7999999999863
No 471
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.52 E-value=3.7e-12 Score=148.67 Aligned_cols=288 Identities=13% Similarity=0.099 Sum_probs=172.3
Q ss_pred HHHHHHHHHhCCC-ccceecChHHHHHHHHHHHHHHHHHhcCC-------------------CC--CCEEEE-cCCCCCC
Q 001990 636 NLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGD-------------------HH--RNVCII-PVSAHGT 692 (985)
Q Consensus 636 el~~~la~l~G~~-~~~~~~~sGa~g~~a~l~air~~~~~~g~-------------------~~--~~~Vlv-~~~~Hg~ 692 (985)
++.+.+++++.-+ ...++.+||+++++++++.+|.|...++. ++ +.+||. ..++||.
T Consensus 109 ~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~ 188 (464)
T TIGR00699 109 ILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGR 188 (464)
T ss_pred HHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCc
Confidence 3333345555321 13477899999999999999887543210 01 235664 6689998
Q ss_pred cHHHHHhcCc-----------EEEEEeCCCC--------------CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc
Q 001990 693 NPATAAMCGM-----------KIVSVGTDAK--------------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE 746 (985)
Q Consensus 693 ~~~~~~~~G~-----------~v~~v~~~~~--------------g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~ 746 (985)
...++...|- .+..+|.... ...++++++++++++.+++++|+++.. ...|++.
T Consensus 189 t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~ 268 (464)
T TIGR00699 189 LFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNH 268 (464)
T ss_pred cHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcC
Confidence 7766543221 1222332210 012467788888766678999988753 3567775
Q ss_pred cC----HHHHHHHHHHcCCEEEEEccccccccCCCCCCcC------C----CcEEEeCCcccccccCCCCCCcceeeeec
Q 001990 747 EG----IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G----ADVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (985)
Q Consensus 747 ~d----i~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~------g----~Di~~~s~hKtl~~p~g~GGPg~G~l~~~ 812 (985)
+ +++|.++|++||+++|+|+++. |+.+.|.+ | +|++++ .|.++ .| |++..+
T Consensus 269 -~~~~yl~~lr~lc~~~g~lLI~DEV~t----GfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg----~g----G~~~~~ 333 (464)
T TIGR00699 269 -ASPDFFRKLRDITKKHNVAFIVDEVQT----GVGATGKFWAHEHWNLDDPPDMVTF--SKKFQ----TA----GYFFHD 333 (464)
T ss_pred -CCHHHHHHHHHHHHHcCCEEEEeeeee----CCCCCcchhHHHhcCCCCCCCEEEe--hhhhc----cC----Cccccc
Confidence 4 9999999999999999999872 33333321 2 798776 37662 12 233222
Q ss_pred ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc---
Q 001990 813 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--- 889 (985)
Q Consensus 813 ~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--- 889 (985)
+.+... +.. ...+++.|++..++++.+.|..+.++++. ++..+..++|+++|++.
T Consensus 334 ~~~~~~--~~~-----------------~~~~T~~gnp~~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~ 391 (464)
T TIGR00699 334 PAFRPN--KPY-----------------RQFNTWMGDPSRALILREIIQEIKRKDLL---ENVAHVGDYLYTGLEDLQKK 391 (464)
T ss_pred hhccCC--CCc-----------------ccccCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHh
Confidence 211110 000 01123445677777777888888666544 35556667888888752
Q ss_pred CC-eeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 890 YP-ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 890 ~~-i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
+. ++..-........+-+.++. ......+.+.+.++|+++.... .+.||++|+..+|++||| .++++|
T Consensus 392 ~~~~i~~vRg~G~Glm~gie~~~-----~~~~~~i~~~~~~~Gvl~~~~g---~~~ir~~Ppl~it~~eid---~~~~~l 460 (464)
T TIGR00699 392 YPEFIQNLRGKGRGTFIAWDTPD-----EAKRDKLLKKARNNGVNIGGCG---VKAIRLRPMLVFQKHHAD---IFLEII 460 (464)
T ss_pred CCCceeeecccCeEEEEEEecCC-----HHHHHHHHHHHHHCCcEEecCC---CCeEEEeCCCCCCHHHHH---HHHHHH
Confidence 33 21110000011122233320 1124678888999999985432 378999999999999999 999998
Q ss_pred HHH
Q 001990 969 LSL 971 (985)
Q Consensus 969 ~~i 971 (985)
.++
T Consensus 461 ~~~ 463 (464)
T TIGR00699 461 SKI 463 (464)
T ss_pred HHh
Confidence 875
No 472
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.52 E-value=2.9e-12 Score=152.06 Aligned_cols=305 Identities=14% Similarity=0.206 Sum_probs=179.1
Q ss_pred hhcHHHHHHHHHHHHHHHhC----CCccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHH-hc
Q 001990 627 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MC 700 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G----~~~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~-~~ 700 (985)
.+|..++.+.+.+++.+.+| +++..+..++|++ +.+. +++.+. .++|.|+++.+.|+.+...+. ..
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~---l~~~l~-----~pGD~Vlv~~P~Y~~~~~~~~~~~ 164 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANET---IMFCLA-----DPGDVFLIPSPYYAAFDRDLRWRT 164 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHH---HHHHhC-----CCCCEEEECCCCccchHHHHHhhC
Confidence 36776666667777776666 4555565655654 3322 223221 478999999998877776666 58
Q ss_pred CcEEEEEeCC--CCCCCCHHHHHHHHHh---cCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEcccccc
Q 001990 701 GMKIVSVGTD--AKGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA 772 (985)
Q Consensus 701 G~~v~~v~~~--~~g~iDle~L~~~i~~---~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~ 772 (985)
|++++.+|++ +++.+|++++++++++ ...++++|++++| |++|.+-+ .+++|.++|+++|+++++|+++...
T Consensus 165 G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~ 244 (496)
T PLN02376 165 GVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAAT 244 (496)
T ss_pred CCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcccc
Confidence 9999999985 3468999999876532 1257899999999 58999862 3788899999999999999998532
Q ss_pred c-cC--CCCC----Cc-----CCCc--EEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCC
Q 001990 773 Q-VG--LTSP----GY-----IGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQ 837 (985)
Q Consensus 773 ~-~g--~~~~----g~-----~g~D--i~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~ 837 (985)
. .+ +... .+ ...| +++.|++|.|+.| |.++|+++.. +.+...+.. . .
T Consensus 245 ~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp----GlRvG~li~~~~~l~~~~~~-~-------------~ 306 (496)
T PLN02376 245 VFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP----GFRVGIVYSFNDSVVSCARK-M-------------S 306 (496)
T ss_pred ccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC----cceEEEEEECCHHHHHHHHH-H-------------h
Confidence 1 11 1110 00 0123 3467888988654 7899999985 333332110 0 0
Q ss_pred CCCCcccccchhhhHHHHHHHHHHHhchhhH-----HHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecC
Q 001990 838 PLGTIAAAPWGSALILPISYTYIAMMGSKGL-----TEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (985)
Q Consensus 838 ~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl-----~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~ 911 (985)
....+++ ....+++ ..+....+ .+..++..++.+.+.+.|++ ++.+. .+++..+ +-++++.
T Consensus 307 ~~~~vs~-------~~Q~a~~--~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~--~~~aG~f--lwi~l~~ 373 (496)
T PLN02376 307 SFGLVSS-------QTQLMLA--SMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACL--TSNAGLF--AWMDLRH 373 (496)
T ss_pred hcCCCCH-------HHHHHHH--HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCceEE--EEEEchh
Confidence 0011111 1111111 22222222 22234455666777788876 44432 2222222 3355542
Q ss_pred cccc-CCC-CHHHHHHHHHH-CCCccCCC-CC--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 912 LKNT-AGI-EPEDVAKRLMD-YGFHGPTM-SW--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 912 ~~~~-~g~-~~~~l~~~L~e-~Gi~~~~~-~~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.... ... +..++.+.|.+ .|+.+... .| ..++++|++++. .++++++ ..++.|++++.+
T Consensus 374 ~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~---~al~rl~~~l~~ 438 (496)
T PLN02376 374 LLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLH---VALGRIQDFVSK 438 (496)
T ss_pred hhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHH---HHHHHHHHHHHH
Confidence 1000 001 23567888776 49987432 23 235899999974 3457777 777777777654
No 473
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.51 E-value=2.6e-13 Score=141.23 Aligned_cols=287 Identities=16% Similarity=0.160 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHH---HHHhcCcEEEEEeCC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~---~~~~~G~~v~~v~~~ 710 (985)
..++++.+|+++|-+.. +++.||+.|++. +++.... .++.+||+.+.+|--... ...+.|+.++.+...
T Consensus 58 t~rLE~~vA~l~GKEAg-LFv~SGTmgNll---aIm~Hc~----~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e 129 (384)
T KOG1368|consen 58 TNRLEQRVAELFGKEAG-LFVPSGTMGNLL---AIMVHCH----QRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE 129 (384)
T ss_pred HHHHHHHHHHHhCccce-eeecccccccHH---HHHHHhc----CCCceEEeccchheeehhccChhhhccceeEeeeeC
Confidence 34688999999998875 666788888844 4443221 356789999988853332 245789999999988
Q ss_pred CCCCCCHHHHHHHHHh-----cCCCeEEEEEEcC-CCcc-ccc--cCHHHHHHHHHHcCCEEEEEcccc-ccccCCCCC-
Q 001990 711 AKGNINIEELRKAAEA-----NRDNLSTLMVTYP-STHG-VYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGLTSP- 779 (985)
Q Consensus 711 ~~g~iDle~L~~~i~~-----~~~~t~~Vvi~~p-n~~G-~i~--~di~eI~~la~~~g~lliVD~a~~-~~~~g~~~~- 779 (985)
++|.+|++++++++.. |.+-|++|.+++- +..| .+. +.+.+|.++|+++|+.+|+|||-. ++......|
T Consensus 130 ~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~v 209 (384)
T KOG1368|consen 130 NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPV 209 (384)
T ss_pred CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCH
Confidence 8999999999999963 2356899999885 4444 655 135667789999999999999852 111111111
Q ss_pred Cc--CCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHH-HHH
Q 001990 780 GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL-PIS 856 (985)
Q Consensus 780 g~--~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~-~~A 856 (985)
.+ ..+|.+...++|.++ .|-+.++..+++++.+.. .+- +..| +.+. +.+.+ +++
T Consensus 210 k~i~~~fDSVsiCLSKglg------APVGSViVG~k~FI~kA~--~~R---------KalG-GGmR-----QsGvLaaaa 266 (384)
T KOG1368|consen 210 KKICSAFDSVSICLSKGLG------APVGSVIVGSKDFIDKAR--HFR---------KALG-GGMR-----QSGVLAAAA 266 (384)
T ss_pred HHHHHhhhhhhhhhhccCC------CCcccEEEccHHHHHHHH--HHH---------HHhc-Cchh-----HHHHHHHHH
Confidence 11 236888877788774 454456666766654321 000 0000 1121 22332 222
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCcc
Q 001990 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (985)
Q Consensus 857 ~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~--~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~ 934 (985)
...|. +.+. ..+...+.++.|++.++.. +.+..+. ...+...+.+. ...++++++.+.|.++||.+
T Consensus 267 Lval~----~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a---~etNiv~~~l~----q~~~~~~~l~~~~~k~gi~l 334 (384)
T KOG1368|consen 267 LVALD----ENVP-LLRADHKRAKELAEYINTPEEIRVEVPA---VETNIVNMVLC----QARLTAEELCKFLEKNGILL 334 (384)
T ss_pred HHHhh----cchH-HHHHHHHHHHHHHHHhccccceeeecch---hhcceeeeecc----cccCCHHHHHHHHHHCCeEE
Confidence 22222 2233 2344566777777777752 3332221 11122222221 23688999999999999986
Q ss_pred CCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 935 PTMSWPVPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 935 ~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
-... ...+|+.++...|.++++ ..+..+.
T Consensus 335 m~~~---s~r~Rivlh~Qvt~~~ve---~~~~~~~ 363 (384)
T KOG1368|consen 335 MGGA---SRRIRIVLHHQVTDEDVE---YVKSVLS 363 (384)
T ss_pred eecc---ccceEEEEEEecCHHHHH---HHHHHHH
Confidence 4221 245999999999999999 8888884
No 474
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.51 E-value=1.3e-12 Score=150.09 Aligned_cols=283 Identities=14% Similarity=0.118 Sum_probs=167.8
Q ss_pred hcHHHHHHHHHHHHHHHhCCC---ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~---~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v 704 (985)
+|..++.+.+++++.+.+|.+ ...+..++|++.....+ ...+. ..++++|+++++.|..+...++..|+++
T Consensus 62 ~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~--~~~l~----~~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 135 (364)
T PRK07865 62 AGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWL--PTLLG----LGPGDVVVIPELAYPTYEVGARLAGATV 135 (364)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHH--HHHHc----CCCCCEEEECCCCcccHHHHHHhcCCEE
Confidence 576666767777777766643 44566666654221221 12110 1367899999988877777788899998
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc-cC-C---
Q 001990 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-L--- 776 (985)
Q Consensus 705 ~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~-~g-~--- 776 (985)
+.++ ++++++. +++++|++++| |++|.+. .++++|.++|+++|+++++|+++..-. .+ .
T Consensus 136 ~~~~-------~~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 202 (364)
T PRK07865 136 VRAD-------SLTELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSI 202 (364)
T ss_pred EecC-------ChhhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcc
Confidence 7764 2333321 57888999988 5799875 247889999999999999999975211 00 0
Q ss_pred CCC----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhH
Q 001990 777 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (985)
Q Consensus 777 ~~~----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~ 852 (985)
..+ +...-.+++.|++|.|+. .|.++|++++++++...+.... .. ...+.+...+
T Consensus 203 ~~~~~~~~~~~~~i~~~S~SK~~~~----~GlRiG~i~~~~~~~~~~~~~~------------~~--~~~~~~~~~q--- 261 (364)
T PRK07865 203 LDPRVCGGDHTGLLAVHSLSKQSNL----AGYRAGFVAGDPALVAELLEVR------------KH--AGMMVPAPVQ--- 261 (364)
T ss_pred ccccccCCccceEEEEeechhccCC----CceeeEEEecCHHHHHHHHHHH------------Hh--cCCCcCHHHH---
Confidence 001 011123778888898854 3678999998877665442110 00 0011111111
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCC
Q 001990 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (985)
Q Consensus 853 ~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~G 931 (985)
.++..++.. .+-+.+..+....+.+++.+.|++ ++.+. .+.+.++ +.+.+. .+..++.+.|.++|
T Consensus 262 -~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~~-------~~~~~~~~~l~~~g 327 (364)
T PRK07865 262 -AAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVD--HSEAGLY--LWATRG-------EDCWDTVAWLAERG 327 (364)
T ss_pred -HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCccc--CCCccEE--EEEeCC-------CCHHHHHHHHHHCC
Confidence 111122221 122344445556777888888877 44322 2222221 223322 34567889999999
Q ss_pred CccCCCC-C-C-CCCEEEEeccCCCCHHhhchHHHHHHHHH
Q 001990 932 FHGPTMS-W-P-VPGTLMIEPTESESKVCHNREDLFFQILL 969 (985)
Q Consensus 932 i~~~~~~-~-p-v~~~lris~t~~~t~eeId~~~~~i~aL~ 969 (985)
|.+.... | + .++++||+++. ++++++ ++++.|+
T Consensus 328 v~v~pg~~f~~~~~~~iRi~~~~--~~~~~~---~~~~~l~ 363 (364)
T PRK07865 328 ILVAPGDFYGPAGAQHVRVALTA--TDERIA---AAVERLA 363 (364)
T ss_pred EEEeCccccCcCCCCEEEEEecC--CHHHHH---HHHHHhh
Confidence 9874321 2 1 35789999874 578888 8877664
No 475
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.51 E-value=1.9e-12 Score=147.83 Aligned_cols=206 Identities=20% Similarity=0.163 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHH----hcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~----~~G~~v~~v~~ 709 (985)
..++++.+|++.|.+.+ +.++||..++.+++. + + .++|+||++...+|..+.... ..++++.+
T Consensus 56 ~~~le~~lA~leg~~~~-v~~~sG~aAi~~~l~-~--l------~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~--- 122 (364)
T PRK07269 56 RAKLEETLAAIESADYA-LATSSGMSAIVLAFS-V--F------PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY--- 122 (364)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHH-H--h------CCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe---
Confidence 55799999999997764 566777766533331 1 1 367899998877765544322 12333322
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
..|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++.... ...|-..|+|+++
T Consensus 123 ----~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~-di~~I~~la~~~gi~vvvD~t~~~~~--~~~pl~~gaDivv 192 (364)
T PRK07269 123 ----ANTEEELIAAIE---EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKGAKVIVDNTFYSPI--YQRPIELGADIVL 192 (364)
T ss_pred ----cCCHHHHHHhcC---cCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhhCCcEEE
Confidence 248999999997 78999999999 5789887 99999999999999999999864332 2356678999999
Q ss_pred eCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
+|+||+++.+ |.--+|+++++ +++.+.+.. .. ...+. +. ++ ..|| +...|-+.
T Consensus 193 ~S~tK~l~g~---~d~~gG~v~~~~~~l~~~~~~-~~------------~~~G~-~~----s~---~~a~--l~~~~L~t 246 (364)
T PRK07269 193 HSATKYLSGH---NDVLAGVVVTNDLELYEKLFY-NL------------NTTGA-VL----SP---FDSY--LLMRGLKT 246 (364)
T ss_pred ecCceeccCC---CcccceEEEeCcHHHHHHHHH-HH------------HHhCC-CC----CH---HHHH--HHHcCCCc
Confidence 9999999522 11124677775 444433310 00 00011 11 11 1123 34444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+..+.++..+++.++.+.|++
T Consensus 247 L~~r~~~~~~na~~~a~~L~~ 267 (364)
T PRK07269 247 LSLRMERSTANAQEVVAFLKK 267 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 777788889999999999986
No 476
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.51 E-value=4.8e-12 Score=147.57 Aligned_cols=356 Identities=15% Similarity=0.150 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHhcCccCcCcccccccceecccCccccccccc---cccc---cccCCCCcchhhhcHHHHHHHHHHHHHH
Q 001990 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVT---WPSF---ANIHPFAPADQAQGYQEMFNNLGEWLCT 643 (985)
Q Consensus 570 e~e~~~~l~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~---~~~f---~~~~p~~p~e~~~G~~~~~~el~~~la~ 643 (985)
-.++.+.+..+..++. ...++.|+.+.++++........- ..+. .....|.| .+|..++.+.+.+++.+
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~LR~aia~~~~~ 91 (409)
T PRK07590 17 FPEIARRVNAFREANP--EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQGYDFLREKIAENDYQ 91 (409)
T ss_pred HHHHHHHHHHHhhhcC--CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCCCHHHHHHHHHHHHH
Confidence 3567777777766542 224678888777665543222210 0010 01122322 35755555555555544
Q ss_pred HhC--CCccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcE-----------EEEEeC
Q 001990 644 ITG--FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK-----------IVSVGT 709 (985)
Q Consensus 644 l~G--~~~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~-----------v~~v~~ 709 (985)
..| .+..++..++|++ +. ..+ .... .++++|+++++.+..+...++..|.+ ++.+|.
T Consensus 92 ~~g~~~~~~~I~it~Ga~~al-~~l---~~~~-----~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 162 (409)
T PRK07590 92 ARGCDISADEIFISDGAKCDT-GNI---LDIF-----GPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPC 162 (409)
T ss_pred hcCCcCChhhEEECCCHHHHH-HHH---HHhc-----CCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeec
Confidence 444 4555666666655 33 222 1211 36789999999887777778888986 888888
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEcccccccc-C-CCCC-CcC-
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G-LTSP-GYI- 782 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~~-g-~~~~-g~~- 782 (985)
+.++...++ +. .+++++|++++| |++|.+- ..+++|+++|+++|++++.|+++..-.. + ...+ ..+
T Consensus 163 ~~~~~~~~d-----~~--~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 235 (409)
T PRK07590 163 TAENNFVPE-----LP--EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIE 235 (409)
T ss_pred ccccCCccc-----Cc--ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCC
Confidence 644322222 11 157889999999 6899986 2578899999999999999998742110 1 0001 111
Q ss_pred C---CcEEEeCCcccccccCCCCCCcceeeeecccccCcCC-CCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHH
Q 001990 783 G---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (985)
Q Consensus 783 g---~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lp-g~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a 858 (985)
+ .-|++.|+.|+|+. .|.++|++++++++++.+. +....... ............++. ..+ .++..
T Consensus 236 ~~~~~vi~~~SfSK~~~~----pGlRiG~~i~~~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~s~--~~q----~a~~~ 304 (409)
T PRK07590 236 GARECAIEFRSFSKTAGF----TGTRCAYTVVPKELKGKTSDGEGVSLNS-LWNRRQSTKFNGVSY--IVQ----RAAEA 304 (409)
T ss_pred CcccceEEEecCccccCC----cCceeEEEEcCHHHhhhccccchhhhHH-HHHHHHhhcccCcCH--HHH----HHHHH
Confidence 1 12556788888854 4789999999887765321 00000000 000000000001110 011 11112
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHH-HCCCccCC
Q 001990 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT 936 (985)
Q Consensus 859 ~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~-e~Gi~~~~ 936 (985)
++..-+.+-+.+..+...++.+++.+.|++ ++.+ ..+.+.. .+.++++ .+.+..++.+.|. ++|+.+..
T Consensus 305 ~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~~~g~~--f~wi~~~-----~~~~~~~~~~~l~~~~gv~v~p 375 (409)
T PRK07590 305 VYSPEGKAQIKELIDYYMENAKIIREGLESAGFEV--YGGVNAP--YIWVKTP-----DGMSSWDFFDKLLQEANVVGTP 375 (409)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCce--ecCCcce--EEEEECC-----CCCCHHHHHHHHHHHCCEEEeC
Confidence 222112233444455566777888888887 3332 2211211 2345554 1356678888876 56987643
Q ss_pred C-CCC--CCCEEEEeccCCCCHHhhchHHHHHHHHHHH
Q 001990 937 M-SWP--VPGTLMIEPTESESKVCHNREDLFFQILLSL 971 (985)
Q Consensus 937 ~-~~p--v~~~lris~t~~~t~eeId~~~~~i~aL~~i 971 (985)
. .|. ..+.+||+. ..++++++ ..++.|.++
T Consensus 376 g~~f~~~~~~~iRi~~--~~~~~~l~---~~l~rl~~~ 408 (409)
T PRK07590 376 GSGFGPSGEGYFRLSA--FGSRENVL---EAMERIKKA 408 (409)
T ss_pred hhHhCCCCCCEEEEEc--cCCHHHHH---HHHHHHHhh
Confidence 2 222 246899985 35788888 877777653
No 477
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=1.5e-12 Score=147.73 Aligned_cols=272 Identities=16% Similarity=0.208 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCCCCC
Q 001990 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (985)
Q Consensus 635 ~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~~g~ 714 (985)
.++++++++++|.+..++..++|++. +..+.++.+ ++++|+++.+.|+.+...++..|++++.++.++++.
T Consensus 58 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~-------~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (337)
T PRK03967 58 DPLREAIAEFYGLDAENIAVGNGSDE--LISYLVKLF-------EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFT 128 (337)
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHH--HHHHHHHHh-------CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46788899999988766666666552 222223321 467899999877666666788999999999987788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCC--CcCCCc-EEEeC
Q 001990 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGAD-VCHLN 790 (985)
Q Consensus 715 iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~--g~~g~D-i~~~s 790 (985)
+|++++++++ ++++++++++| |++|.+. +.++|.++++ +|+++++|+++.. +..-..+ ...... +++.|
T Consensus 129 ~d~~~l~~~~----~~~~~v~~~~P~NPtG~~~-~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S 201 (337)
T PRK03967 129 IDGERIAEKA----KNASAVFICSPNNPTGNLQ-PEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRT 201 (337)
T ss_pred cCHHHHHHhc----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEec
Confidence 9999998865 46778889999 5899998 7899999995 6999999998742 1110000 011112 55677
Q ss_pred CcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHH
Q 001990 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (985)
Q Consensus 791 ~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~ 870 (985)
+.|+|+. .|.++|++++++++++.+.... ...+++ .....++...+. ..+-+.+
T Consensus 202 ~SK~~~l----~GlRiG~iv~~~~~i~~~~~~~--------------~~~~~~------~~~q~~~~~~l~--~~~~~~~ 255 (337)
T PRK03967 202 FSKAFGL----AGIRAGYAIANEEIIDALYRIK--------------PPFSLN------ILTMKIVRLALD--HYDLIEE 255 (337)
T ss_pred chHhhcc----hhhhheeeecCHHHHHHHHhhc--------------CCCCCC------HHHHHHHHHHHh--CHHHHHH
Confidence 7787754 4789999999877665432110 000111 111111112222 1222333
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEecc
Q 001990 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPT 950 (985)
Q Consensus 871 ~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t 950 (985)
..+...++++.+.+.|.+. ..++ +..+ +.+++ .+.+.|.++||.+..+.....+.+|+++
T Consensus 256 ~~~~~~~~r~~l~~~L~~~---~~~~--~~~~--~~~~~------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~- 315 (337)
T PRK03967 256 RIDYIIKERERVRRELGEY---AYPS--DANF--LLLKL------------DAYDYLLENGIVVRKLSGRLEGHIRVTV- 315 (337)
T ss_pred HHHHHHHHHHHHHHHhccC---cCCC--CCcE--EEEhH------------HHHHHHHHCCEEEEeCCCCCCCeEEEec-
Confidence 3344455666777777652 1111 1111 22221 2678888999987533211247899997
Q ss_pred CCCCHHhhchHHHHHHHHHHHHH
Q 001990 951 ESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 951 ~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
.+.++.+ +|+++|+++.+
T Consensus 316 --~~~~~~~---~l~~~l~~~~~ 333 (337)
T PRK03967 316 --GKREEND---EFIKALKEIKE 333 (337)
T ss_pred --CCHHHHH---HHHHHHHHHHH
Confidence 4678888 99999987754
No 478
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=2.2e-13 Score=149.35 Aligned_cols=297 Identities=15% Similarity=0.150 Sum_probs=190.9
Q ss_pred hcHHHHHHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEE
Q 001990 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v 707 (985)
-|..+.+.|+++.+|+++|.+.+.++ +.|-..+ +++.-. + ..++.-||..+..|.+....+++.|+.++.+
T Consensus 178 ~G~~~~hkelE~l~A~f~g~e~a~vF-~mGf~TN-s~~~p~--l-----~~~gsLIiSDelNHaSi~~GaRLSgAtiRVf 248 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLGVEDAIVF-SMGFATN-SMNIPS--L-----LGKGSLIISDELNHASLITGARLSGATTRVF 248 (519)
T ss_pred cccHHHHHHHHHHHHHhcCCcceEEE-ecccccc-ccCcce--e-----ecCCcceeeccccchheeccccccCceEEEE
Confidence 58888999999999999999986432 2232223 221111 1 1356656667777777777788999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhc----CCCe------EEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCC
Q 001990 708 GTDAKGNINIEELRKAAEAN----RDNL------STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (985)
Q Consensus 708 ~~~~~g~iDle~L~~~i~~~----~~~t------~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~ 776 (985)
.+| |..+||+.|++. .|+| ..|++..- +..|.+. +++++.++++++.++|++|+||..+..|-
T Consensus 249 kHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv-~Lp~vvalkkkykayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 249 RHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIV-DLPEVVALKKKYKAYLYLDEAHSIGAMGA 322 (519)
T ss_pred ecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeec-ccHHHHHhhccccEEEEeeccccccccCC
Confidence 986 888888888642 2222 23334332 4678888 89999999999999999999997665532
Q ss_pred C--------CCCcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccch
Q 001990 777 T--------SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (985)
Q Consensus 777 ~--------~~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g 848 (985)
. .++...+||+.+++.|+|+ -.+|+++.++++++++...... .-+++ .+
T Consensus 323 tGrgvce~~g~d~~dvDImMGtftKSfg-------a~GGyiagsk~lid~lrt~s~~---------~~yat-~~------ 379 (519)
T KOG1357|consen 323 TGRGVCEYFGVDPEDVDIMMGTFTKSFG-------AAGGYIAGSKELIDYLRTPSPS---------ALYAT-SL------ 379 (519)
T ss_pred CCcceeeccCCCchhheeecceehhhcc-------cccceecCcHHHHhhhccCCCc---------eeecc-cC------
Confidence 1 1122347999999989874 3468999999888765321100 00111 11
Q ss_pred hhhHHHHHHHHHHH-hc---hhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCC-CceeEEEEEEecCccccCCCCHHHH
Q 001990 849 SALILPISYTYIAM-MG---SKGLTEASKIAILNANYMAKRLEKHYPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDV 923 (985)
Q Consensus 849 ~~~~~~~A~a~l~~-lg---~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~-~~~~~~~vv~~~~~~~~~g~~~~~l 923 (985)
++..+......+.. +| .+.-++..++..++++|++..|++..-+.+ |.+ .|+. .+.+... .....+
T Consensus 380 sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivy-G~~dSpVv-plll~~~-------~k~~~f 450 (519)
T KOG1357|consen 380 SPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVY-GNNDSPVV-PLLLYGP-------AKIVAF 450 (519)
T ss_pred ChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEe-cCCCCCcc-eeeecCc-------ccccHH
Confidence 11222222233333 23 334456677888999999999987322223 332 2332 2223222 233467
Q ss_pred HHHHHHCCCccCCCCCC----CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 924 AKRLMDYGFHGPTMSWP----VPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 924 ~~~L~e~Gi~~~~~~~p----v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.+.|++++|.+-...|| .....|+|.+..+|+|++| ++++.+.++-++
T Consensus 451 ~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld---~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 451 SREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLD---RALEVIDRVGDE 502 (519)
T ss_pred HHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHH---HHHHHHhhhchh
Confidence 77888887766445555 2367899999999999999 888888766543
No 479
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.50 E-value=2.1e-12 Score=152.25 Aligned_cols=360 Identities=12% Similarity=0.047 Sum_probs=187.5
Q ss_pred ccccccceecccCccccccccccccc-cccCCCCcchhhhcHHHHHHHHHHHH-HHHhCC---C--ccce-ecChHHHHH
Q 001990 590 SMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWL-CTITGF---D--SFSL-QPNAGAAGE 661 (985)
Q Consensus 590 ~~~~lGs~~~~~~~~~~~~~~~~~~f-~~~~p~~p~e~~~G~~~~~~el~~~l-a~l~G~---~--~~~~-~~~sGa~g~ 661 (985)
.++.|+.+.+.+++...........- .+|.+ ..|..++.+++.+.. .+..+. + ..++ .++++++|.
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~~Y~~------~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al 174 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGDNYPV------PDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAM 174 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcCCCCC------CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHH
Confidence 34556666666665433322111000 12332 257666666665533 332222 1 1144 445555555
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcC--cEEEEEeCCC--CCCCCHHHHHHHHHhcCCCeEEEEEE
Q 001990 662 YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG--MKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVT 737 (985)
Q Consensus 662 ~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G--~~v~~v~~~~--~g~iDle~L~~~i~~~~~~t~~Vvi~ 737 (985)
..++.++..- .- ..++|+|+++++.+..+...+++.| ++++.++.++ +..+|+++|+++++ +++++|+++
T Consensus 175 ~~~~~aL~~~--~l-l~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~tkai~l~ 248 (527)
T PRK09275 175 CYIFDSLKEN--GL-LKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD---PSIKALFLV 248 (527)
T ss_pred HHHHHHHhhh--hc-CCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---CCCCEEEEe
Confidence 3333332100 00 1478999999986666665566664 5566665543 36799999999887 889999999
Q ss_pred cC-CCccccc--cCHHHHHHHHHH--cCCEEEEEccccccccCCCCCCc-C-CCcEEEeCCcccccccCCCCCCcceeee
Q 001990 738 YP-STHGVYE--EGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPGY-I-GADVCHLNLHKTFCIPHGGGGPGMGPIG 810 (985)
Q Consensus 738 ~p-n~~G~i~--~di~eI~~la~~--~g~lliVD~a~~~~~~g~~~~g~-~-g~Di~~~s~hKtl~~p~g~GGPg~G~l~ 810 (985)
+| |++|.+- ..+++|+++|++ +|+++++|+++..-...+..... + .--+++.|+.|+|++ .|+++|+++
T Consensus 249 nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~m----tG~RlG~i~ 324 (527)
T PRK09275 249 NPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGA----TGWRLGVIA 324 (527)
T ss_pred CCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccC----cHhHHhhhh
Confidence 99 5899986 248889999964 59999999987421111111111 1 123667788888865 489999999
Q ss_pred eccc-----ccCcCCC--------CccccCCCC-----CCC------C-CCCCCCCcccccchhhhHHHHHH-HHHHHhc
Q 001990 811 VKKH-----LAPFLPS--------HPVVSTGGI-----PAP------E-KSQPLGTIAAAPWGSALILPISY-TYIAMMG 864 (985)
Q Consensus 811 ~~~~-----l~~~lpg--------~~~g~~~~~-----~~~------~-~~~~t~~i~s~~~g~~~~~~~A~-a~l~~lg 864 (985)
++++ ++..+|. ++-..+.+. ..+ . ....+.+.++ ..|..++..+. +.+. -+
T Consensus 325 ~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~--p~Q~a~al~~~~all~-~~ 401 (527)
T PRK09275 325 LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLST--PQQVQMALFSLFALLD-EE 401 (527)
T ss_pred cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCC--HHHHHHHHHHHHHHHh-Cc
Confidence 9875 4444421 000000000 000 0 0011122221 11221111111 1121 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccc-----------cCCCCHHHHHHHHHH-CCC
Q 001990 865 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN-----------TAGIEPEDVAKRLMD-YGF 932 (985)
Q Consensus 865 ~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~-----------~~g~~~~~l~~~L~e-~Gi 932 (985)
++-..+..+....+.+.+.+.|. +.+....+++.++ +.+++..+.. ..+.+..+++.+|.+ .|+
T Consensus 402 ~~~~~~~~~~~~~Rr~~l~~~Lg--~~~~~~~p~g~fY--~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV 477 (527)
T PRK09275 402 DAYKKAMKDIIRRRYKALYEGLG--LPEPEDPNNAAYY--TLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGV 477 (527)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcC--CCCcCCCCCeeEE--EEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCE
Confidence 22233444455666677777763 2322112223333 2344432100 001356788888875 488
Q ss_pred cc-CCCCCC-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 933 HG-PTMSWP-VPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 933 ~~-~~~~~p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
.+ +...|. ..+.+|+|+.. .+++++. ...+.|++++++..
T Consensus 478 ~v~PG~~Fg~~~~~vRis~a~-~~~~~~~---~~~~rl~~~l~~y~ 519 (527)
T PRK09275 478 VLLPGGGFGGPEWSVRVSLAN-LNEEDYA---KIGKAIRKLLDEYY 519 (527)
T ss_pred EEeCchhhCCCCCeEEEEEec-CCHHHHH---HHHHHHHHHHHHHH
Confidence 75 333331 25789999853 3567777 77777777776554
No 480
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.50 E-value=1.7e-11 Score=141.51 Aligned_cols=305 Identities=11% Similarity=0.085 Sum_probs=183.8
Q ss_pred cCCCCCCCCCcHHHHHHHHh--CCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHh
Q 001990 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (985)
Q Consensus 171 lG~g~~~~~~p~~v~~~i~~--~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~ 248 (985)
+|.|..+...|+.+.+++.. +...++.|.+. +| ..++++.+|+++|.++.++.+++|+|.++..++.++
T Consensus 33 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 33 MGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPP-----EG----FPELRELILKDLGLDDDEALITAGATESLYLVMRAF 103 (380)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC-----cc----hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 35565555556666544332 11223333221 12 445788999999999889999999998877665544
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc-----------hhhhc-cCCCEeEEEEEcC-CCCeeec--
Q 001990 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL-- 313 (985)
Q Consensus 249 ~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~-- 313 (985)
. ++||+|++++..|+.....+ +..|.+++.++. +++++ +++++++|++.+| |.+|.+.
T Consensus 104 ~---~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 104 L---SPGDNAVTPDPGYLIIDNFA----SRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred c---CCCCEEEEcCCCCcchHHHH----HHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 2 27899999998887655444 345777776653 23444 6778999998888 6899864
Q ss_pred -cHHHHHHHHHhCCcEEEEEeccc---cccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCce
Q 001990 314 -DYGDFIKNAHANGVKVVMATDLL---ALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (985)
Q Consensus 314 -dl~~I~~~a~~~galliV~a~~~---alg~l~-~p~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~ 387 (985)
++++|+++|+++|+++++|. .. ..+... ........+++.+. |.|+.| |-.+|++++++++++.+....
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~----G~RiG~i~~~~~l~~~~~~~~ 251 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDC-TYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMA----GLRIGAVVATPDLIEVVKSIV 251 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEeh-hHHHHhccCCchhhcCCCCEEEEeechhhcCCc----cceeEEEecCHHHHHHHHHHH
Confidence 69999999999999999952 11 011100 00011345677775 877532 334699999888776652100
Q ss_pred eeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCE
Q 001990 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (985)
Q Consensus 388 vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 467 (985)
+...+++..... ++...+.. ..+=++++.+...++..++.+.|+++.++
T Consensus 252 -----------------------------~~~~~~~~~~~~-~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 300 (380)
T PRK06225 252 -----------------------------INDLGTNVIAQE-AAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGV 300 (380)
T ss_pred -----------------------------hcccCCCHHHHH-HHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 001111121111 11111111 11223455555566677888888875224
Q ss_pred EEc-CCCCcceEEEecC--C--HHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 468 EVQ-GLPFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 468 ~~~-~~~~~~~~~i~~~--~--~~~l~~~L~~~Gi~~~~~-------~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.+. ..+...-+.+.++ + ..++.+.|.++||.+... .++.+|+|+.. ++++++++++.|..
T Consensus 301 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~ 372 (380)
T PRK06225 301 FLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPD 372 (380)
T ss_pred ccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHH
Confidence 321 1111112333332 2 788999999999987542 13589999864 78999999999974
No 481
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.50 E-value=1.5e-12 Score=141.70 Aligned_cols=261 Identities=17% Similarity=0.186 Sum_probs=170.3
Q ss_pred hhhhcHHHHHHHHHHHHHHHhCCCc--cceecChHHHHHHHHHHHHHHHHH-----hcCCC-CCCEEE-EcCCCCCCcHH
Q 001990 625 DQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHK-----ARGDH-HRNVCI-IPVSAHGTNPA 695 (985)
Q Consensus 625 e~~~G~~~~~~el~~~la~l~G~~~--~~~~~~sGa~g~~a~l~air~~~~-----~~g~~-~~~~Vl-v~~~~Hg~~~~ 695 (985)
|+.+++.-+.+++-..+.++.|.+. ..++..+|+.+++-+++++| |.. .+|.. -.+-|+ +++.+|-+..+
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Ar-yk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k 212 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCAR-YKNFPEVKTKGMFALPPLILFTSEESHYSIKK 212 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHH-hhcCchhhhhhhhcCCcEEEEecccchhhHHH
Confidence 6777777778888888999999876 45777778776644444444 221 12210 123344 47778888888
Q ss_pred HHHhcC---cEEEEEeCCCCCCCCHHHHHHHHHhcCCC---eEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEcc
Q 001990 696 TAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGA 768 (985)
Q Consensus 696 ~~~~~G---~~v~~v~~~~~g~iDle~L~~~i~~~~~~---t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a 768 (985)
.+...| -.++.|++|+.|.+++++||++|-+.+.+ +..|-.+..+ ..|.++ ||..|+++|++|+.|+|||+|
T Consensus 213 aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD-dL~~iadiC~k~~lWmHvDAA 291 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD-DLNGIADICEKHKLWMHVDAA 291 (510)
T ss_pred HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC-cHHHHHHHHHhcCEEEEeecc
Confidence 888888 58999999999999999999999755444 4555555555 489999 999999999999999999998
Q ss_pred ccccccCCCC-------CCcCCCcEEEeCCcccccccCCCCCCcceeeeecc-cccCcCCCCc--cccCCCCCCCCCCCC
Q 001990 769 NMNAQVGLTS-------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHP--VVSTGGIPAPEKSQP 838 (985)
Q Consensus 769 ~~~~~~g~~~-------~g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~-~l~~~lpg~~--~g~~~~~~~~~~~~~ 838 (985)
..-++ +.+ .|...+|.++.+.||+++.|+.++ .+..++ .+........ +-...|. .+.-.+.
T Consensus 292 wGGgl--LmS~k~R~kl~Giera~SvtwnpHK~~gaplqCs-----a~l~r~~gll~~Cn~~~A~YLFq~dK-~YdvS~D 363 (510)
T KOG0629|consen 292 WGGGL--LMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCS-----AFLTREEGLLQRCNQMSAIYLFQQDK-FYDVSYD 363 (510)
T ss_pred ccccc--ccChhhHhhccCccccCceeecHHHhhcCcchhh-----HHHHHHHHHHHhhcccchhhhhccCc-eeecccc
Confidence 64211 111 234458999999999998877654 455553 3322211100 0000010 0000111
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc--cCCeeEcC
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRG 896 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~--~~~i~~~g 896 (985)
|+.-. ..-|...-+-.-|.....-|.+|+++...++..+|+||.++|++ ++..++..
T Consensus 364 TgdK~-iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~ 422 (510)
T KOG0629|consen 364 TGDKA-IQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFEL 422 (510)
T ss_pred cccch-hhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcC
Confidence 22111 11121222344577778889999999999999999999999987 55555543
No 482
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.49 E-value=4.1e-12 Score=145.63 Aligned_cols=209 Identities=19% Similarity=0.166 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcH----HHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~----~~~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.+++|..+..++ +++ . .++++||+++..++... ..+...|++++.++.
T Consensus 54 ~~~le~~la~l~g~~~~-~~~~sG~~ai~~~-~~l---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 54 RGVLEQAIADLEGGDQG-FACSSGMAAIQLV-MSL---F-----RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHH-HHH---h-----CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 56899999999999875 6677777665332 222 1 36789999887665432 234568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~pn-~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ ++|++|++++|+ ++|... |+++|+++||++|+++++|+++..+. +..|...|+|+++
T Consensus 124 -----~d~~~l~~~i~---~~tklv~le~P~NP~~~~~-dl~~I~~la~~~g~~lIvD~t~~~~~--~~~p~~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT---PNTKAIFIETPTNPLMQET-DIAAIAKIAKKHGLLLIVDNTFYTPV--LQRPLEEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcccc--ccCchhcCCcEEE
Confidence 38999999997 789999999994 788887 89999999999999999999875332 2345567899999
Q ss_pred eCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|++|+++.+ ++..+|+++++ +++...+.... ... ..+.+++ .+|..++ +-+.
T Consensus 193 ~S~sK~~~g~---~d~~~G~iv~~~~~l~~~~~~~~-------------~~~-g~~~s~~-------~a~l~~~--~l~t 246 (366)
T PRK08247 193 HSATKYLGGH---NDVLAGLVVAKGQELCERLAYYQ-------------NAA-GAVLSPF-------DSWLLIR--GMKT 246 (366)
T ss_pred eecceeccCC---CceeeeEEecChHHHHHHHHHHH-------------Hhc-CCCCChH-------HHHHHHh--ccCc
Confidence 9999998521 22246777776 44443321000 000 0111111 1233222 3334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001990 868 LTEASKIAILNANYMAKRLEKH 889 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~~ 889 (985)
+....++..++++.+.+.|++.
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~ 268 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQ 268 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 5556667788899999999874
No 483
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.49 E-value=4.2e-12 Score=146.05 Aligned_cols=209 Identities=19% Similarity=0.201 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+. .+.+++|++++..++.++. .++|+|+++...|+..... ....|+++..++.
T Consensus 53 ~~~le~~lA~l~g~~~-v~~~~gg~~Ai~~~l~all--------~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 53 RDLLQQALAELEGGAG-AVVTNTGMSAIHLVTTALL--------GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 5578999999999654 3566677766644443331 4678999988877643322 2334677776653
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.|+++++++++ ++|++|++++| |++|.+. |+++|+++||++|+++++|+++..+. ...|-.+|+|+++
T Consensus 124 -----~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~-dl~~I~~la~~~g~~vvvD~a~~~~~--~~~pl~~gaDivv 192 (382)
T TIGR02080 124 -----GDEQALRAALA---QKPKLVLIETPSNPLLRVV-DIAKICHLAKAVGAVVVVDNTFLSPA--LQNPLALGADLVL 192 (382)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhhCCCEEE
Confidence 38999999997 78999999999 5799997 89999999999999999999985432 2344467899999
Q ss_pred eCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhh
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~g 867 (985)
.|++|+++.+ ++..+|++.++ +++.+.+... +. .++ .+.+ + ..+|.. .-|-+-
T Consensus 193 ~S~sK~l~G~---~~~~~G~i~~~~~~~~~~l~~~------------~~-~~g-~~~s----p---~~a~l~--lr~l~t 246 (382)
T TIGR02080 193 HSCTKYLNGH---SDVIAGAVIAKDPQVAEELAWW------------AN-NLG-VTGG----A---FDSYLT--LRGLRT 246 (382)
T ss_pred eecceeccCC---CCceeEEEEeCCHHHHHHHHHH------------HH-ccC-CCCC----H---HHHHHH--Hcccch
Confidence 9999998521 22247777664 4444332110 00 001 1111 1 123333 334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 001990 868 LTEASKIAILNANYMAKRLEK 888 (985)
Q Consensus 868 l~~~~~~~~~~a~~l~~~L~~ 888 (985)
+..+.++..+++..+.+.|++
T Consensus 247 l~~R~~~~~~na~~~a~~L~~ 267 (382)
T TIGR02080 247 LVARMRLQQRNAQAIVEYLQT 267 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 666677888999999999986
No 484
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.49 E-value=7.8e-12 Score=146.70 Aligned_cols=309 Identities=13% Similarity=0.118 Sum_probs=181.1
Q ss_pred hhcHHHHHHHHHHHHHHHhC----CCccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHH-hc
Q 001990 627 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MC 700 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G----~~~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~-~~ 700 (985)
..|..++...+.+.+.+.+| +++..+..++|++ +.+.. +..+. .++|.|+++.+.++.+...+. ..
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l---~~~l~-----~pGD~Vlv~~P~Y~~f~~~~~~~~ 165 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELL---TFILA-----DPGDALLVPTPYYPGFDRDLRWRT 165 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCCcchHHHHHhcC
Confidence 46877767667777776665 3444555555554 33222 22221 478899999998887766655 57
Q ss_pred CcEEEEEeCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEcccccc
Q 001990 701 GMKIVSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA 772 (985)
Q Consensus 701 G~~v~~v~~~~~--g~iDle~L~~~i~~~---~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~ 772 (985)
|++++.|+++.+ +.+|++++++++++. +.++++|++++| |++|.+-+ .+++|.++|+++|+++|+|+++...
T Consensus 166 g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~ 245 (447)
T PLN02607 166 GVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGS 245 (447)
T ss_pred CcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 999999988643 568999999998631 247899999999 68998862 3889999999999999999987532
Q ss_pred cc---CCCCCC----cCC----Cc--EEEeCCcccccccCCCCCCcceeeeec-ccccCcCCCCccccCCCCCCCCCCCC
Q 001990 773 QV---GLTSPG----YIG----AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQP 838 (985)
Q Consensus 773 ~~---g~~~~g----~~g----~D--i~~~s~hKtl~~p~g~GGPg~G~l~~~-~~l~~~lpg~~~g~~~~~~~~~~~~~ 838 (985)
.. .+.... ..+ .+ +++.|+.|.|+. .|.++|+++.. +.+...+... ..
T Consensus 246 ~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~----~GlRvG~ivs~n~~l~~~~~~~--------------~~ 307 (447)
T PLN02607 246 VFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL----PGFRVGTIYSYNDKVVTTARRM--------------SS 307 (447)
T ss_pred ccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC----CcceEEEEEEcCHHHHHHHHHH--------------hh
Confidence 21 111100 111 12 455677787754 47899999983 4443322100 00
Q ss_pred CCCcccccchhhhHHHHHHHHHHHhchhh-----HHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCc
Q 001990 839 LGTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGL 912 (985)
Q Consensus 839 t~~i~s~~~g~~~~~~~A~a~l~~lg~~g-----l~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~ 912 (985)
...+++ ....+++ ..+.+.. +.+..++..++.+.+.+.|++ ++.. ..+++..+ +-++++..
T Consensus 308 ~~~~s~-------~~q~~~~--~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~--~~~~ag~f--vw~~L~~~ 374 (447)
T PLN02607 308 FTLVSS-------QTQHLLA--SMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIEC--LKGNAGLF--CWMNLSPL 374 (447)
T ss_pred cCCCCH-------HHHHHHH--HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc--ccCCeeEE--EEEEchHh
Confidence 011111 0111111 2232222 223334455666778888876 4332 22222222 33555421
Q ss_pred c-ccCCCCHHHHHHHHHH-CCCccCC-CCC--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHHHc
Q 001990 913 K-NTAGIEPEDVAKRLMD-YGFHGPT-MSW--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFTTFA 978 (985)
Q Consensus 913 ~-~~~g~~~~~l~~~L~e-~Gi~~~~-~~~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~~~ 978 (985)
. ........++.++|.+ +|+.+.. ..| ..++++||+++. .++++++ ..++.|.+.+++.+.+
T Consensus 375 ~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~---~gl~Ri~~~l~~~~~~ 441 (447)
T PLN02607 375 LETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLE---VALKRIHRFMDRRKTA 441 (447)
T ss_pred hcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHH---HHHHHHHHHHHHHHhh
Confidence 0 0000123467777765 6998643 222 246899999875 3477788 8888888777655443
No 485
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.49 E-value=3.4e-12 Score=144.64 Aligned_cols=268 Identities=12% Similarity=0.101 Sum_probs=166.1
Q ss_pred HHHHHHHHHHhC---CCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCcEEEEEeCCC
Q 001990 635 NNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (985)
Q Consensus 635 ~el~~~la~l~G---~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~~v~~v~~~~ 711 (985)
.++++.+++.++ .+..++..++|++. +..++++.+ ++|+++++.|..+...++..|++++.+|.++
T Consensus 59 ~~Lr~aia~~~~~~~~~~~~i~it~Ga~~--~i~~~~~~~---------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~ 127 (335)
T PRK14808 59 EELIEKILSYLDTDFLSKNNVSVGNGADE--IIYVMMLMF---------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK 127 (335)
T ss_pred HHHHHHHHHHhCCCCCCcceEEEcCCHHH--HHHHHHHHh---------CcEEECCCCHHHHHHHHHHcCCeEEEecCCC
Confidence 467778888887 66656655555541 223333321 4689988866666667889999999999987
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccC-CCCC-CcCCCcEEE
Q 001990 712 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LTSP-GYIGADVCH 788 (985)
Q Consensus 712 ~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g-~~~~-g~~g~Di~~ 788 (985)
++.+|... + ..+++|++++| |++|.+- +.+++.+++ ++++++++|+++..-... .... ....-=+++
T Consensus 128 ~~~~~~~~----~----~~~~~i~i~nP~NPTG~~~-s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~ 197 (335)
T PRK14808 128 DLRIPEVN----V----GEGDVVFIPNPNNPTGHVF-EREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVI 197 (335)
T ss_pred cCCCChhH----c----cCCCEEEEeCCCCCCCCCc-CHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEE
Confidence 77665332 2 24578899999 5899998 788998888 579999999987421110 0000 111112556
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHHHHHhchhhH
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl 868 (985)
.|+.|+|+. .|.++|++++++++++.+.... ...++++ ..+ .++.+.+. ..+-+
T Consensus 198 ~S~SK~~~l----~GlRvG~~v~~~~~~~~l~~~~--------------~~~~~~~--~~q----~a~~~~l~--~~~~~ 251 (335)
T PRK14808 198 RTFSKAFSL----AAQRIGYVVSSEKFIDAYNRVR--------------LPFNVSY--VSQ----MFAKVALD--HREIF 251 (335)
T ss_pred EechhhccC----cccceEEEEeCHHHHHHHHHhc--------------CCCCCCH--HHH----HHHHHHHh--CHHHH
Confidence 777777754 4789999999887765542110 0011111 111 11222222 12223
Q ss_pred HHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEE
Q 001990 869 TEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (985)
Q Consensus 869 ~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lri 947 (985)
.+..+...++.+++.+.|++ ++.+ ..+++.+ +.+.++ +.+..++.+.|.++||.+..+ .+.+||
T Consensus 252 ~~~~~~~~~~r~~l~~~L~~~g~~~--~~~~g~f---~~~~l~------~~~~~~~~~~l~~~Gi~V~~~----~~~~Ri 316 (335)
T PRK14808 252 EERTKFIVEERERMKSALREMGYRI--TDSRGNF---VFIFME------KEEKERLLEHLRAKNIAVRSF----REGVRI 316 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEE--CCCCCeE---EEEeCC------CccHHHHHHHHHHCCeEEEEC----CCCeEE
Confidence 34444555666778888876 4332 2222222 233443 235578999999999998633 367999
Q ss_pred eccCCCCHHhhchHHHHHHHHHH
Q 001990 948 EPTESESKVCHNREDLFFQILLS 970 (985)
Q Consensus 948 s~t~~~t~eeId~~~~~i~aL~~ 970 (985)
++ .+.++.+ +|+++|++
T Consensus 317 si---~~~~~~~---~~~~~l~~ 333 (335)
T PRK14808 317 TI---GKREEND---MILKELEV 333 (335)
T ss_pred ec---CCHHHHH---HHHHHHHh
Confidence 97 6789999 99999875
No 486
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.49 E-value=1.1e-11 Score=133.66 Aligned_cols=225 Identities=20% Similarity=0.183 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-Cc---HHHHHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TN---PATAAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg-~~---~~~~~~~G~~v~~v~~ 709 (985)
...++++++.|-|.-.. +.+.||-.+. .+++.... ..+|+||.+..-+| ++ ....+..|+++++++.
T Consensus 64 ~~vlE~RiAaLEGG~aa-~a~aSG~AA~---~~ai~~la-----~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~ 134 (426)
T COG2873 64 TDVLEERIAALEGGVAA-LAVASGQAAI---TYAILNLA-----GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP 134 (426)
T ss_pred HHHHHHHHHHhhcchhh-hhhccchHHH---HHHHHHhc-----cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC
Confidence 34578899998775433 3344554433 33333321 36789998765555 33 2235789999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEc-CCCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTY-PSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~-pn~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
+ |++.++++|+ ++|++|+++. .|+.+.+. |+++|+++||++|++++||-.-. -.-+.+|-+.|+||++
T Consensus 135 ~-----d~~~~~~aI~---~nTkavf~EtigNP~~~v~-Die~ia~iAh~~gvpliVDNT~a--tpyl~rP~~hGADIVv 203 (426)
T COG2873 135 D-----DPENFEAAID---ENTKAVFAETIGNPGLDVL-DIEAIAEIAHRHGVPLIVDNTFA--TPYLCRPIEHGADIVV 203 (426)
T ss_pred C-----CHHHHHHHhC---cccceEEEEeccCCCcccc-CHHHHHHHHHHcCCcEEEecCCC--cceecchhhcCCCEEE
Confidence 5 8999999998 9999999986 47778886 99999999999999999996542 2346789999999999
Q ss_pred eCCcccccccCCCCCCcceeeeecccccCcC-CCCccccC-CCCCCCC----------------C---CCCCCCcccccc
Q 001990 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVST-GGIPAPE----------------K---SQPLGTIAAAPW 847 (985)
Q Consensus 789 ~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~l-pg~~~g~~-~~~~~~~----------------~---~~~t~~i~s~~~ 847 (985)
.|..||++ +.|-.+|-++++-...+.- ++++-..+ .+..-++ | -..++... +|+
T Consensus 204 HS~TK~ig----GhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l-sPf 278 (426)
T COG2873 204 HSATKYIG----GHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL-SPF 278 (426)
T ss_pred Eeeccccc----CCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc-CcH
Confidence 99999984 3345455555552111111 22111000 0000000 0 00001111 011
Q ss_pred hhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001990 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (985)
Q Consensus 848 g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~~~~i 892 (985)
.+++...|-|.+.-++++.++|+..+++.|++..++
T Consensus 279 ---------nAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV 314 (426)
T COG2873 279 ---------NAFLLLQGLETLSLRMERHCENALKVAEFLENHPKV 314 (426)
T ss_pred ---------HHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCe
Confidence 134455566777778899999999999999875443
No 487
>PLN02452 phosphoserine transaminase
Probab=99.49 E-value=5.2e-12 Score=143.59 Aligned_cols=282 Identities=13% Similarity=0.036 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhhCCCCc--ceeeccchHHHHHHHHHHhhhhcCCCCEEE-EcCCCChh-HHHHHHHhhcCCCeEEEE
Q 001990 210 LESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNNIQKGKKKTFI-IASNCHPQ-TIDICITRADGFDIKVVV 285 (985)
Q Consensus 210 l~~i~e~q~~ia~L~g~~~~--~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vl-v~~~~h~s-~~~~~~~~a~~~gi~v~~ 285 (985)
.+.+.+.++.+.+|++.+.. -+-+..|||.++|++.+.+- . ++++++ +..+.+.. ..+. ++.+|...+.
T Consensus 51 ~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~-~--~~~~~l~~~~G~fg~r~~~~----a~~~g~~~~~ 123 (365)
T PLN02452 51 LSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLC-K--PGDKADFVVTGSWSKKAAKE----AKKYCKTNVI 123 (365)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcC-C--CCCeEEEEECCHHHHHHHHH----HHHhCCCcEE
Confidence 47788899999999998643 23345889999999988763 2 566665 44556643 2333 3344543333
Q ss_pred eC--c------hhhhc--cCCCEeEEEEEcC-CCCee-eccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEE
Q 001990 286 SD--L------KDIDY--KSGDVCGVLVQYP-GTEGE-VLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 352 (985)
Q Consensus 286 ~~--~------~~l~~--l~~~t~~V~v~~p-n~~G~-i~dl~~I~~~a~~~galliV~a~~~alg~l-~~p~~~GaDi~ 352 (985)
.. . -++++ .+++...|.+++. +.+|+ +.|++++++ ++++||+ ..++|.. .+..+||+|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa-~Ss~g~~pidv~~~~v~~- 195 (365)
T PLN02452 124 ASGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFKDYPDVGN------VPLVADM-SSNFLSKPVDVSKYGVIY- 195 (365)
T ss_pred EecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcEecCcccccCC------CeEEEEC-CccccCcccCHHHcCEEE-
Confidence 21 1 12222 3456788877664 78999 589988853 7888854 2344433 3457899977
Q ss_pred EecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001990 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (985)
Q Consensus 353 v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa 432 (985)
.++|+..+| ||+|++++|+++++++++.. + ..+++....++. .-..|+|+ ..++++.++
T Consensus 196 -~saqK~lGP-----~Gl~~v~vr~~~l~~~~~~~----------~-~~~~~~~~~~~~-s~~~TP~v---~~i~~l~~a 254 (365)
T PLN02452 196 -AGAQKNVGP-----SGVTIVIIRKDLIGNARPIT----------P-GMLDYKIHAEND-SLYNTPPC---FGIYMCGLV 254 (365)
T ss_pred -EecccccCC-----CCeEEEEEcHHHHhhcccCC----------C-chhhHHHHHhcC-CccCChhH---HHHHHHHHH
Confidence 466443224 67999999999988764211 1 122221111100 11245555 677777777
Q ss_pred HHHHHcCcc-hHHHHHHHHHHHHHHHHHHHhcCCCE-EE-cCCC-Cc-ceEEEecCC---HHHHHHHHHHcCceeee--e
Q 001990 433 MYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTV-EV-QGLP-FF-DTVKVKCAD---AHAIASAAYKIEMNLRV--V 502 (985)
Q Consensus 433 ~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~-~~-~~~~-~~-~~~~i~~~~---~~~l~~~L~~~Gi~~~~--~ 502 (985)
+ .++..+ |++.+.+|+.+++++|+++|++..|+ .. .++. .. ..++|+.++ ..++.+.+.++|+..-. .
T Consensus 255 L--~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r 332 (365)
T PLN02452 255 F--EDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHR 332 (365)
T ss_pred H--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCcc
Confidence 6 666565 89999999999999999999986326 21 1111 12 246677665 67899999999997522 1
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 503 DSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 503 ~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.-+.+|+|.-..-+.+++++|++.++.
T Consensus 333 ~~gg~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 333 SVGGMRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred ccCceEEECcCCCCHHHHHHHHHHHHH
Confidence 123499999999999999999999874
No 488
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.48 E-value=2.8e-12 Score=146.74 Aligned_cols=282 Identities=15% Similarity=0.124 Sum_probs=164.9
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC---ccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~---~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G~ 702 (985)
.+|..++.+++.+++.+.+|.+ ...+..++|++ +.. ++++.+. ..+++.|+++++.|..+...++..|+
T Consensus 55 ~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~---~~~~~l~----~~~gd~Vl~~~p~y~~~~~~~~~~g~ 127 (357)
T TIGR03539 55 TWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVA---WLPTLLG----LGPGDTVVIPELAYPTYEVGALLAGA 127 (357)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHH---HHHHHHc----CCCCCEEEECCCCcHHHHHHHHhcCC
Confidence 3576677777777777766654 34555555544 332 2222210 13678999999877666666778899
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccc-cccC--C
Q 001990 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (985)
Q Consensus 703 ~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~-~~~g--~ 776 (985)
+++.++ |++.++ . +++++|++++| |++|.+-+ ++++|+++|+++|+++++|+++.. ...+ .
T Consensus 128 ~~~~v~-------~~~~l~---~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 194 (357)
T TIGR03539 128 TPVAAD-------DPTELD---P---VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPV 194 (357)
T ss_pred EEeccC-------ChhhcC---c---cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCc
Confidence 887663 333322 1 57889999998 57998762 477899999999999999998742 1111 0
Q ss_pred --CCC----CcCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCCCCcccccchhh
Q 001990 777 --TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 777 --~~~----g~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t~~i~s~~~g~~ 850 (985)
..+ +...--+++.|++|.|+. .|.++|++++++++...+.... ... ..+.+..++
T Consensus 195 ~~~~~~~~~~~~~~vi~~~S~SK~~~~----~G~R~G~~i~~~~~~~~~~~~~------------~~~--~~~~~~~~q- 255 (357)
T TIGR03539 195 SILDPRVCGGDHTGLLAVHSLSKRSNL----AGYRAGFVAGDPALVAELLTVR------------KHA--GLMVPAPVQ- 255 (357)
T ss_pred cceecccCCCccccEEEEeccccccCC----CceeEEEEecCHHHHHHHHHHH------------hhc--ccCCCHHHH-
Confidence 011 011113677788888743 4788999998877665432100 000 011111111
Q ss_pred hHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecCccccCCCCHHHHHHHHHH
Q 001990 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~~~~~~g~~~~~l~~~L~e 929 (985)
.++..++. ..+.+.+..+...++.+++.+.|++ ++.+. .+.+.++ +.+.. +.+..++.+.|.+
T Consensus 256 ---~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~--~p~~~~~--~~~~~-------~~~~~~~~~~l~~ 319 (357)
T TIGR03539 256 ---AAMVAALG--DDGHVAEQKARYAARRAQLKPALEKAGFRID--HSEAGLY--LWATR-------GEDAWDTVDRLAE 319 (357)
T ss_pred ---HHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc--CCCccEE--EEEEC-------CCCHHHHHHHHHh
Confidence 11112221 1223444445556677888888876 44332 1212211 22332 2356788899999
Q ss_pred CCCccCCCC-C--CCCCEEEEeccCCCCHHhhchHHHHHHHH
Q 001990 930 YGFHGPTMS-W--PVPGTLMIEPTESESKVCHNREDLFFQIL 968 (985)
Q Consensus 930 ~Gi~~~~~~-~--pv~~~lris~t~~~t~eeId~~~~~i~aL 968 (985)
+||.+.... | +..+.+|+++.. ++++++ +.++.|
T Consensus 320 ~gV~v~pg~~f~~~~~~~iRis~~~--~~~~i~---~~~~~l 356 (357)
T TIGR03539 320 LGILVAPGDFYGPAGSQHVRVALTA--TDERIA---AAVARL 356 (357)
T ss_pred CCEEECCccccCCCCCCeEEEEecC--CHHHHH---HHHHhh
Confidence 999875432 2 124789999864 578888 776654
No 489
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.48 E-value=1.9e-11 Score=141.59 Aligned_cols=306 Identities=11% Similarity=0.087 Sum_probs=187.3
Q ss_pred ecCCCCCCCCCcHHHHHHHHh---CCccccccCCChhhHhhHHHHHHHHHHHHHHHhhCCC---CcceeeccchHHHHHH
Q 001990 170 FIGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP---MSNASLLDEGTAAAEA 243 (985)
Q Consensus 170 ~lG~g~~~~~~p~~v~~~i~~---~~~~~t~~~py~~e~sqg~l~~i~e~q~~ia~L~g~~---~~~~sl~~~~ta~~ea 243 (985)
.+|.|..+...|+.+.+++.. +.. ...|.+ .+|..+....+++.+++.+|.+ ..++.+++|++.++..
T Consensus 31 ~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 31 SLGQGVVSYPPPPEAIEALNNFLANPE-NHKYQA-----VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 467777665566666544332 221 112322 3666677777888999999974 4568888898877776
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeec
Q 001990 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVL 313 (985)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~ 313 (985)
+++++ .. +||+|++++-.|+.+...++ ..|++++.++. +++++ +++++++|++.+| |.+|.+.
T Consensus 105 ~~~~~-~~--~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~ 177 (389)
T PRK05957 105 AILAI-TD--PGDEIILNTPYYFNHEMAIT----MAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVY 177 (389)
T ss_pred HHHHh-cC--CCCEEEEeCCCCcCHHHHHH----hcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCc
Confidence 66554 23 78999999988877655543 46888877654 44555 6778999999988 6899987
Q ss_pred c---HHHHHHHHHhCCcEEEEEecccc---ccC-C-CC----CCcccceEEEecC-ccccccCCCCCCc--eEEEEEchh
Q 001990 314 D---YGDFIKNAHANGVKVVMATDLLA---LTI-L-KP----PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQE 378 (985)
Q Consensus 314 d---l~~I~~~a~~~galliV~a~~~a---lg~-l-~~----p~~~GaDi~v~s~-k~lg~P~~~GGP~--~G~l~~~~~ 378 (985)
+ +++|+++||++|+++++|. ... ..- . .+ +...+--|++.|. |.|+. || +|+++++++
T Consensus 178 ~~~~~~~i~~~a~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~------~GlRiG~~~~~~~ 250 (389)
T PRK05957 178 PEALLRAVNQICAEHGIYHISDE-AYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF------ASWRIGYMVIPIH 250 (389)
T ss_pred CHHHHHHHHHHHHHcCcEEEEec-cchhccCCCCCccChhhCCCccCcEEEEecchhhccC------ccceeEEEecCHH
Confidence 6 8999999999999999942 211 110 0 01 1122234667776 87643 45 799998888
Q ss_pred hHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH-HHHHcCcchHHHHHHHHHHHHHHH
Q 001990 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTF 457 (985)
Q Consensus 379 ~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~-y~~~~g~~Gl~~i~~~~~~~a~~l 457 (985)
+++++... +.+...|++... ..++. .+ ..+..-+++..++..++.+++
T Consensus 251 ~~~~~~~~----------------------------~~~~~~~~~~~~--q~~~~~~l-~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 251 LLEAIKKI----------------------------QDTILICPPVVS--QYAALGAL-QVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred HHHHHHHH----------------------------HhhcccCCCcHH--HHHHHHHH-hCChHHHHHHHHHHHHHHHHH
Confidence 77665210 011112221111 11111 11 112222566667778888889
Q ss_pred HHHHhcCCCE-EEcCCCCcce-EEEecC-C--HHHHHHHHH-HcCceeeee-----c-CCeEEEEeccCCCHHHHHHHHH
Q 001990 458 ALGLKKLGTV-EVQGLPFFDT-VKVKCA-D--AHAIASAAY-KIEMNLRVV-----D-SNTVTASFDETTTLEDVDKLFI 525 (985)
Q Consensus 458 ~~~L~~~g~~-~~~~~~~~~~-~~i~~~-~--~~~l~~~L~-~~Gi~~~~~-----~-~~~lris~~~~~t~edid~ll~ 525 (985)
.+.|++++++ .+. .+...- +.++++ + ..++.++|. ++||.+... . ++.+|+++... +++++++.++
T Consensus 300 ~~~L~~~~~~~~~~-~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~ 377 (389)
T PRK05957 300 LKSLGQLQDRCTLH-PANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIE 377 (389)
T ss_pred HHHHHhcCCCcccc-CCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHH
Confidence 9999887433 332 221111 223433 2 778999987 579987542 1 35899999764 4666666666
Q ss_pred HHh
Q 001990 526 VFA 528 (985)
Q Consensus 526 ~l~ 528 (985)
.|.
T Consensus 378 ~l~ 380 (389)
T PRK05957 378 RLV 380 (389)
T ss_pred HHH
Confidence 554
No 490
>PRK06855 aminotransferase; Validated
Probab=99.48 E-value=8e-12 Score=146.61 Aligned_cols=308 Identities=15% Similarity=0.087 Sum_probs=173.4
Q ss_pred hhcHHHHHHHHHHHHHHHhCCC--ccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH-HHhcCc
Q 001990 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGM 702 (985)
Q Consensus 627 ~~G~~~~~~el~~~la~l~G~~--~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~-~~~~G~ 702 (985)
.+|..++.+.+.+++.+..|.+ ..+++.++|++ +... ++. .. .++++|+++++.+..+... ....|+
T Consensus 72 ~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~---~~~-l~-----~~Gd~Vlv~~P~Y~~~~~~~~~~~g~ 142 (433)
T PRK06855 72 TKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAK---IYG-LL-----RREARVIGPSPAYSTHSSAEAAHAGY 142 (433)
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHH---HHH-hc-----CCCCeEEEeCCCCchHHHHHHHhcCC
Confidence 3676666666666666655643 34555555554 3322 221 11 4678999998866554432 235688
Q ss_pred EEEEEeCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEEccccccc-cC-
Q 001990 703 KIVSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG- 775 (985)
Q Consensus 703 ~v~~v~~~~-~-g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~--di~eI~~la~~~g~lliVD~a~~~~~-~g- 775 (985)
+++.+|.++ + ..+|+++|+++++++ ++++++++++| |++|.+-+ .+++|+++|+++|++++.|+++..-. .+
T Consensus 143 ~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~ 221 (433)
T PRK06855 143 PPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK 221 (433)
T ss_pred eEEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 999898864 3 468999999999632 46788888999 67999862 47888999999999999999874211 11
Q ss_pred -CCCCCcC---CCcEEEeCCcccccccCCCCCCcceeeeecc-----c---ccCcCCCCccccCCCCCCCCCCCCCCCcc
Q 001990 776 -LTSPGYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-----H---LAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (985)
Q Consensus 776 -~~~~g~~---g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~-----~---l~~~lpg~~~g~~~~~~~~~~~~~t~~i~ 843 (985)
+...... +.-|.+.|+.|+|++| |.++|++++.. . +...+... .. ...+
T Consensus 222 ~~~sl~~~~~~~~~I~~~S~SK~~~~p----GlRiG~ii~p~~~~~~~~~~~~~~~~~~--------------~~-~~~~ 282 (433)
T PRK06855 222 KTVPLSEVIGDVPGIALKGISKELPWP----GSRCGWIEVYNADKDEVFKKYINSILNA--------------KM-IEVC 282 (433)
T ss_pred CCCCHHHHcCcCCeEEEecCccccCCC----cceEEEEEEeCCchhhHHHHHHHHHHHh--------------hc-cccC
Confidence 0010111 1237788889998654 78999998731 1 11111000 00 0011
Q ss_pred cccchhhhHHHHHHHHHHHhc--hhhHHHHHHHHHHHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCc-c-c-----
Q 001990 844 AAPWGSALILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGL-K-N----- 914 (985)
Q Consensus 844 s~~~g~~~~~~~A~a~l~~lg--~~gl~~~~~~~~~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~-~-~----- 914 (985)
.+.+.+ .++..++. -+ ++-+++..+...++.+.+.+.|++...+.+..+++.++ +.++++.- . .
T Consensus 283 ~~~~~Q----~a~~~~l~-~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~w~~l~~~~~~~~~~~~ 355 (433)
T PRK06855 283 STTLPQ----MAIPRIMS-HPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFY--MTVVFEDGVLNNKQSLP 355 (433)
T ss_pred CChHHH----HHHHHhhc-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEE--EeeccccccccccccCC
Confidence 111111 11112221 11 12234445555677778888887622222222223222 23344310 0 0
Q ss_pred cC---------------CCCHHHHHHH-HHHCCCccC-CCCC-CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHH
Q 001990 915 TA---------------GIEPEDVAKR-LMDYGFHGP-TMSW-PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKF 974 (985)
Q Consensus 915 ~~---------------g~~~~~l~~~-L~e~Gi~~~-~~~~-pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~ 974 (985)
.. ..+..+++.. +.++|+.+. ...| +....+|+|+.. .+.++|+ +.++.|++++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~---~~~~~l~~~~~~ 429 (433)
T PRK06855 356 IENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFE---WIYQTLAEKIEE 429 (433)
T ss_pred cchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHH---HHHHHHHHHHHH
Confidence 00 0123455544 567798753 2223 223469999976 4688888 888888887764
No 491
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.48 E-value=6.5e-12 Score=147.89 Aligned_cols=282 Identities=14% Similarity=0.102 Sum_probs=157.0
Q ss_pred CCCCEEEEcCCCCCCcHHHHHhc--CcEEEEEeCCCC-------CCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccc-
Q 001990 678 HHRNVCIIPVSAHGTNPATAAMC--GMKIVSVGTDAK-------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE- 746 (985)
Q Consensus 678 ~~~~~Vlv~~~~Hg~~~~~~~~~--G~~v~~v~~~~~-------g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~- 746 (985)
.++|+|+++.+.+..+...+++. |++++.++.+++ ..+|+++++++++ +++++|++++| |++|.+-
T Consensus 182 ~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~---~~~kai~l~nP~NPTG~vls 258 (521)
T TIGR03801 182 KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD---PSIKALFVVNPSNPPSVAMS 258 (521)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC---CCCcEEEEeCCCCCCCCCCC
Confidence 47899999998665555555554 788888887532 5789999998876 78999999999 5799886
Q ss_pred -cCHHHHHHHHHHc--CCEEEEEccccccccCCCCCCcCCC--cEEEeCCcccccccCCCCCCcceeeeeccc-----cc
Q 001990 747 -EGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGA--DVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-----LA 816 (985)
Q Consensus 747 -~di~eI~~la~~~--g~lliVD~a~~~~~~g~~~~g~~g~--Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~-----l~ 816 (985)
..+++|+++|+++ +++++.|.++..-...+.+...... -+++.|+.|+|++ .|+++|+++++++ ++
T Consensus 259 ~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~----~G~RlG~i~~~~~~v~d~li 334 (521)
T TIGR03801 259 DESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGA----TGWRLGTIALHKDNIFDKLI 334 (521)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccC----chhhhhhhhcCchHHHHHHH
Confidence 2488889999986 8999999987421111111111111 2667888888865 4899999999854 33
Q ss_pred CcCCCCcc--------ccCCCC--C---CC------C-CCCCCCCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHH
Q 001990 817 PFLPSHPV--------VSTGGI--P---AP------E-KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (985)
Q Consensus 817 ~~lpg~~~--------g~~~~~--~---~~------~-~~~~t~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~ 876 (985)
..+|.... ..+.+. . .| . ....+.+.++ + .+.-+++.+...+...+++-..+..+...
T Consensus 335 ~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~-p-~Q~q~al~a~~all~~~~~y~~~~~~~~~ 412 (521)
T TIGR03801 335 AELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLST-P-QQVQMALFSLFALMDKENAYKAETKDICR 412 (521)
T ss_pred HhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCc-H-HHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 33321100 000000 0 00 0 0011122221 1 12111111111111112222333444555
Q ss_pred HHHHHHHHHHhccCCeeEcCCCCceeEEEEEEecCccc-c----------CCCCHHHHHHHHHH-CCCcc-CCCCCC-CC
Q 001990 877 LNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN-T----------AGIEPEDVAKRLMD-YGFHG-PTMSWP-VP 942 (985)
Q Consensus 877 ~~a~~l~~~L~~~~~i~~~g~~~~~~~~~vv~~~~~~~-~----------~g~~~~~l~~~L~e-~Gi~~-~~~~~p-v~ 942 (985)
.+.+.+.+.| ++.+....+++.++ +.+++..+.. . ...+..+++.+|.+ .|+.+ +...|. ..
T Consensus 413 ~R~~~l~~~L--g~~~~~~~~~g~~Y--~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~ 488 (521)
T TIGR03801 413 RREKLLFRGL--GLPLQEDPNDVAYY--TLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPE 488 (521)
T ss_pred HHHHHHHHhc--CCCCcCCCCCeEEE--EEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCC
Confidence 6666677776 33322111222233 3345542100 0 01245678888875 58875 333232 24
Q ss_pred CEEEEeccCCCCHHhhchHHHHHHHHHHHHHHHH
Q 001990 943 GTLMIEPTESESKVCHNREDLFFQILLSLTKFTT 976 (985)
Q Consensus 943 ~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~~ 976 (985)
+.+|||+.. .+++++. +..+.|++++++..
T Consensus 489 ~~vRisla~-l~~~~~~---~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 489 WSVRVSLAN-LNEYDYA---EIGRAIRKILDEYY 518 (521)
T ss_pred CeEEEEecC-CCHHHHH---HHHHHHHHHHHHHH
Confidence 679999843 4677788 88888888776643
No 492
>PRK09105 putative aminotransferase; Provisional
Probab=99.48 E-value=1.5e-11 Score=141.40 Aligned_cols=264 Identities=13% Similarity=0.091 Sum_probs=173.6
Q ss_pred HHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCch---
Q 001990 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (985)
Q Consensus 213 i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~~--- 289 (985)
..++++.+|+.+|.++.++.+++|++.++..++.++. . +||+|++++-.|+.+...++ ..|++++.++.+
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~-~--~gd~Vli~~P~y~~~~~~~~----~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT-S--PTAGLVTADPTYEAGWRAAD----AQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc-C--CCCEEEEeCCChHHHHHHHH----HcCCeEEEecCCCCC
Confidence 4457778999999999999999999987776665542 3 78999999999998877654 468888877542
Q ss_pred -----hhhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEeccccccCCCCCC---cccceEEEe-cC-
Q 001990 290 -----DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILKPPG---ELGADIVVG-SA- 356 (985)
Q Consensus 290 -----~l~~l~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~--~galliV~a~~~alg~l~~p~---~~GaDi~v~-s~- 356 (985)
++++..+++++|++.+| |++|.+.+.+++.++++. +|+++++|.-...+....+.. +.+-++++. |.
T Consensus 153 ~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 153 AHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred CCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEeccc
Confidence 23222356888999998 789999988888877754 488888852111221111111 234566554 44
Q ss_pred ccccccCCCCCCc--eEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001990 357 QRFGVPMGYGGPH--AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (985)
Q Consensus 357 k~lg~P~~~GGP~--~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y 434 (985)
|.||. || +|++++++++++.+-. . ...+.+ .. +..+++.
T Consensus 233 K~~g~------~GlRiG~~v~~~~~i~~l~~----------------------------~-~~~~~~-~~---~~~aa~~ 273 (370)
T PRK09105 233 KLYGM------AGMRLGLAAARPDLLAKLAR----------------------------F-GHNPLP-VP---AAAAGLA 273 (370)
T ss_pred HhhcC------CccceeeeecCHHHHHHHHh----------------------------c-CCCCcC-HH---HHHHHHH
Confidence 76653 45 7999988777665410 0 011111 11 1122221
Q ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC-HHHHHHHHHHcCceeeee---cCCeEEEE
Q 001990 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV---DSNTVTAS 510 (985)
Q Consensus 435 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~l~~~L~~~Gi~~~~~---~~~~lris 510 (985)
.+..++-+++..++..++.+++.+.|++.| +++.. +...-+.++.+. ..++.+.|.++||.++.. .++.+|++
T Consensus 274 -~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~-~~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris 350 (370)
T PRK09105 274 -SLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTP-SQANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVT 350 (370)
T ss_pred -HHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCC-CCCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEE
Confidence 122233356666777888889999999886 77653 222223355544 788999999999988432 25889999
Q ss_pred eccCCCHHHHHHHHHHHh
Q 001990 511 FDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 511 ~~~~~t~edid~ll~~l~ 528 (985)
+. +++++++|+++|.
T Consensus 351 ~~---~~~~~~~l~~al~ 365 (370)
T PRK09105 351 VG---SEEEMAAFRSAFA 365 (370)
T ss_pred cC---CHHHHHHHHHHHH
Confidence 77 6889999999986
No 493
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.48 E-value=1.2e-11 Score=146.13 Aligned_cols=305 Identities=17% Similarity=0.174 Sum_probs=178.2
Q ss_pred hcHHHHHHHHHHHHHHHhC----CCccceecChHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHH-hcC
Q 001990 628 QGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 701 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G----~~~~~~~~~sGa~-g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~-~~G 701 (985)
+|..++.+.+.+++.+.+| ++...+..++|++ +.... +..+. .+++.|+++++.+..+...+. ..|
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l---~~~l~-----~pGd~Vlv~~P~Y~~~~~~~~~~~g 157 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETL---MFCLA-----EPGDAFLLPTPYYPGFDRDLKWRTG 157 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHH---HHHhC-----CCCCEEEECCCCCCchHHHHhhcCC
Confidence 5766666666666665555 3444555555554 33222 22221 478899999998877766666 589
Q ss_pred cEEEEEeCC--CCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEEccccccc
Q 001990 702 MKIVSVGTD--AKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (985)
Q Consensus 702 ~~v~~v~~~--~~g~iDle~L~~~i~~~---~~~t~~Vvi~~p-n~~G~i~--~di~eI~~la~~~g~lliVD~a~~~~~ 773 (985)
++++.+|.+ ++..+|++++++++++. ..++++|++++| |++|.+- +.+++|.++|+++|+++++|+++....
T Consensus 158 ~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~ 237 (468)
T PLN02450 158 VEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTV 237 (468)
T ss_pred cEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccc
Confidence 999999985 33578999999988632 247889999999 5799886 247888999999999999999875211
Q ss_pred -cC--CCCC----C--------cCCCcEEEeCCcccccccCCCCCCcceeeeeccc-ccCcCCCCccccCCCCCCCCCCC
Q 001990 774 -VG--LTSP----G--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQ 837 (985)
Q Consensus 774 -~g--~~~~----g--------~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~-l~~~lpg~~~g~~~~~~~~~~~~ 837 (985)
.+ +... . ...-=+++.|+.|.|++ .|.++|+++++++ +...+... .
T Consensus 238 f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l----~GlRiG~li~~~~~l~~~~~~~--------------~ 299 (468)
T PLN02450 238 FDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGL----PGFRVGAIYSNDEMVVSAATKM--------------S 299 (468)
T ss_pred cCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCC----CCccEEEEEECCHHHHHHHHHH--------------h
Confidence 11 1110 0 01112556777888754 4789999998754 33222100 0
Q ss_pred CCCCcccccchhhhHHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHHhc-cCCeeEcCCCCceeEEEEEEecC
Q 001990 838 PLGTIAAAPWGSALILPISYTYIAMMGSK-----GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (985)
Q Consensus 838 ~t~~i~s~~~g~~~~~~~A~a~l~~lg~~-----gl~~~~~~~~~~a~~l~~~L~~-~~~i~~~g~~~~~~~~~vv~~~~ 911 (985)
....+++ ....+++ ..+.+. -+.+..++..++.+.+.+.|++ ++.+ ..+++..+ +.++++.
T Consensus 300 ~~~~~s~-------~~Q~a~~--~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~--~~~~~g~f--lwi~l~~ 366 (468)
T PLN02450 300 SFGLVSS-------QTQYLLS--ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKC--LKSNAGLF--CWVDMRH 366 (468)
T ss_pred hcCCCCH-------HHHHHHH--HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc--cCCCceEE--EEEEchH
Confidence 0011111 1111111 222221 1334455566677788888877 4332 22222222 2344431
Q ss_pred ccccCCC-CHHHHHHHHH-HCCCccCCC-CC--CCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 912 LKNTAGI-EPEDVAKRLM-DYGFHGPTM-SW--PVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 912 ~~~~~g~-~~~~l~~~L~-e~Gi~~~~~-~~--pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
....... ...++.+.|. +.||.+... .| +.++++|++++. .++++++ +.++.|++++.+.
T Consensus 367 ~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~---~~l~ri~~~l~~~ 431 (468)
T PLN02450 367 LLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLD---LAMKRLKSFVESD 431 (468)
T ss_pred hcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHH---HHHHHHHHHHHhc
Confidence 1000011 1245666665 579987432 12 235899999875 3578888 8888888877543
No 494
>PRK07049 methionine gamma-lyase; Validated
Probab=99.48 E-value=9.4e-12 Score=145.06 Aligned_cols=211 Identities=18% Similarity=0.142 Sum_probs=146.8
Q ss_pred HHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeC----chh
Q 001990 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD----LKD 290 (985)
Q Consensus 215 e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~----~~~ 290 (985)
.+++.+|++.|.+. +.++.+|++++.++++++. . +||+|++++..++.+...+...++..|++++.++ .++
T Consensus 87 ~Le~~lA~leg~~~--~iv~~sG~~Ai~~~l~al~-~--~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~ 161 (427)
T PRK07049 87 IVEDRLAVYEGAES--AALFSSGMSAIATTLLAFV-R--PGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA 161 (427)
T ss_pred HHHHHHHHHhCCCc--EEEEccHHHHHHHHHHHHh-C--CCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence 36689999999774 7788999988777776642 3 8899999999999888776655567899855442 344
Q ss_pred hhc-c-----CCCEeEEEEEcC-CCCeeeccHHHHHHHHHh------CCcEEEEEeccccccCCCCCCcccceEEEecC-
Q 001990 291 IDY-K-----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA------NGVKVVMATDLLALTILKPPGELGADIVVGSA- 356 (985)
Q Consensus 291 l~~-l-----~~~t~~V~v~~p-n~~G~i~dl~~I~~~a~~------~galliV~a~~~alg~l~~p~~~GaDi~v~s~- 356 (985)
+++ + .+++++|++.+| |++|.+.|+++|.++++. +|++++|| +.+.-.....|.++|+||++.|.
T Consensus 162 l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvD-ety~~~~~~~pl~~g~divv~S~S 240 (427)
T PRK07049 162 IGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACD-NTLLGPVFQKPLEHGADLSVYSLT 240 (427)
T ss_pred HHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEE-CCccccccCCccccCCCEEEEcCc
Confidence 543 3 257999999998 789999999999999998 78888884 44333344456688999999998
Q ss_pred ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001990 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (985)
Q Consensus 357 k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~~~l~a~~aa~y~~ 436 (985)
|.+++ .+|--+|++..++++.+.+-. .+. ..+.|. +++.+ |+.
T Consensus 241 K~~gG---~~glr~G~vv~~~~l~~~l~~-------------------------~~~---~~g~~l-s~~~a-----~l~ 283 (427)
T PRK07049 241 KYVGG---HSDLVAGAVLGRKALIRQVRA-------------------------LRS---AIGTQL-DPHSC-----WML 283 (427)
T ss_pred eeecC---CCCcEEEEEECCHHHHHHHHH-------------------------HHH---hcCCCC-CHHHH-----HHH
Confidence 98863 234456888877776654410 000 001111 12211 123
Q ss_pred HcCcchHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001990 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (985)
Q Consensus 437 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~ 468 (985)
..+.+-+....++..+++..+++.|+++.+++
T Consensus 284 ~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 284 GRSLETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 44445667777888899999999999874353
No 495
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.48 E-value=3.6e-11 Score=138.90 Aligned_cols=278 Identities=15% Similarity=0.157 Sum_probs=175.6
Q ss_pred hHHHHHHHHHHHHHHHhhC--CCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEE
Q 001990 207 QGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (985)
Q Consensus 207 qg~l~~i~e~q~~ia~L~g--~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~ 284 (985)
+|..+....+.+.+.+..| .++.++.+++|++.++..++.++. ++||+|++++..|+.+...++ ..|++++
T Consensus 61 ~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vl~~~p~y~~~~~~~~----~~g~~~~ 133 (382)
T PRK06108 61 LGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV---GPGDEVVAVTPLWPNLVAAPK----ILGARVV 133 (382)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchHHHHH----HCCCEEE
Confidence 3433333334455555667 566788888999877766655542 278999999999998877654 4578877
Q ss_pred EeCc-----------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC----CC
Q 001990 285 VSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PP 344 (985)
Q Consensus 285 ~~~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~---dl~~I~~~a~~~galliV~a~~~alg~l~----~p 344 (985)
.++. +++++ +++++++|++++| |.+|.+. ++++|+++|+++|+++++|. ..+..... .+
T Consensus 134 ~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De-~y~~~~~~~~~~~~ 212 (382)
T PRK06108 134 CVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADE-VYERLYYAPGGRAP 212 (382)
T ss_pred EeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeh-hhhhhccCCCCCCC
Confidence 7654 23444 5678999999988 7899775 57889999999999999942 21111110 01
Q ss_pred ------CcccceEEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccC
Q 001990 345 ------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (985)
Q Consensus 345 ------~~~GaDi~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~at 417 (985)
...+-.++++|. |.|+.| |-.+|++++++++++.+.... ..
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~~~~~~~~~--------------------------~~-- 260 (382)
T PRK06108 213 SFLDIAEPDDRIIFVNSFSKNWAMT----GWRLGWLVAPPALGQVLEKLI--------------------------EY-- 260 (382)
T ss_pred CHhhcCCCcCCEEEEeechhhccCc----ccceeeeeCCHHHHHHHHHHH--------------------------Hh--
Confidence 111345778886 877543 334799999888776651000 00
Q ss_pred CCccchhHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcceEEEecCC---HHHHHHHHH-
Q 001990 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY- 493 (985)
Q Consensus 418 sni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~l~~~L~- 493 (985)
...+.+.. ...++..+...+.+-++++.++..++.+++.+.|+++.|+++..+....-+.+.++. ..++.+.|.
T Consensus 261 ~~~~~~~~--~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~ 338 (382)
T PRK06108 261 NTSCVAQF--VQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVD 338 (382)
T ss_pred cccCCChH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHH
Confidence 01111111 112222111223344678888888999999999988733776532111112334442 678888885
Q ss_pred HcCceeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001990 494 KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (985)
Q Consensus 494 ~~Gi~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 528 (985)
++||.+... .++.+|+|++. +++++++.++.|.
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLR 377 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 579987431 14789999998 8899998888876
No 496
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.47 E-value=2.2e-12 Score=132.58 Aligned_cols=277 Identities=19% Similarity=0.194 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhhcCCCeEEEEeCc---
Q 001990 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (985)
Q Consensus 212 ~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~~~~g~~Vlv~~~~h~s~~~~~~~~a~~~gi~v~~~~~--- 288 (985)
.|..|-..+++++|||. +-.+.|+-.+=.|++-++. ++||-|+++.++|-+..-+ |++.|+.+..+|-
T Consensus 62 pI~~F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~---~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~ 132 (382)
T COG1103 62 PIKDFLEDLAEFLGMDE--VRVTAGAREAKFAVMHALC---KEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGY 132 (382)
T ss_pred cHHHHHHHHHHHhCCce--eeecccchhhHHHHHHHhc---cCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCC
Confidence 45667778999999998 6677788766666655653 3789999999999776655 3457888888863
Q ss_pred -------h----hhhc----cCCCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEE-EeccccccCCC-CCCcccce
Q 001990 289 -------K----DIDY----KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVM-ATDLLALTILK-PPGELGAD 350 (985)
Q Consensus 289 -------~----~l~~----l~~~t~~V~v~~pn-~~G~i~dl~~I~~~a~~~galliV-~a~~~alg~l~-~p~~~GaD 350 (985)
+ .+++ -.+.+.+.++|+|+ .+|.+.|.+.++++||++|+++++ +| ...|-++ +..+.|+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~A--Yt~Grmpvs~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCA--YTVGRMPVSGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecc--eeeccccccccccCCC
Confidence 1 1222 12447778899994 799999999999999999999999 44 3455442 44689999
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCCccch--hHHH
Q 001990 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA--QALL 427 (985)
Q Consensus 351 i~v~s~-k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsni~t~--~~l~ 427 (985)
++|+|+ |++.. .| -.|+|++++++.+.+- |.. |+. |. ..|- -.--||. .++.
T Consensus 211 FiVgSGHKsmAA----s~-PiGvl~~~eE~ae~V~-r~S-------g~~-~~----------~KEv-ellGCT~rGapiv 265 (382)
T COG1103 211 FIVGSGHKSMAA----SA-PIGVLAMSEEWAEIVL-RRS-------GRA-FP----------KKEV-ELLGCTVRGAPIV 265 (382)
T ss_pred EEEecCccchhc----cC-CeeEEeehhHHHHHHH-hhc-------ccc-cc----------ccee-eeecccccCchHH
Confidence 999999 88753 22 2689999998766531 111 110 10 0000 0112443 3344
Q ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcc-eEEEecCCHHHHHHHHHHcCceeee----
Q 001990 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFD-TVKVKCADAHAIASAAYKIEMNLRV---- 501 (985)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~-~~~i~~~~~~~l~~~L~~~Gi~~~~---- 501 (985)
-++|+. -.. .+- -..+....++|+++.++|+++||++.++. |..+ -+.|..|.-.+|++.-.++|+++..
T Consensus 266 TlmASf--P~V-~eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~ 341 (382)
T COG1103 266 TLMASF--PHV-VER-VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKK 341 (382)
T ss_pred HHHhcC--HHH-HHH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHh
Confidence 555554 110 111 12345556899999999999987887753 4333 3445555455565555445554421
Q ss_pred -----ec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 502 -----VD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 502 -----~~---~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
+. ...+-+| ++.-+.|+++..+++|++
T Consensus 342 RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afke 376 (382)
T COG1103 342 RGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKE 376 (382)
T ss_pred cCccccccCceeEEEEE-eecCCHHHHHHHHHHHHH
Confidence 01 1234444 345689999999999974
No 497
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.47 E-value=2.7e-12 Score=148.51 Aligned_cols=145 Identities=12% Similarity=0.055 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHhCCCccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHH----HHhcCcEEEEEeC
Q 001990 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (985)
Q Consensus 634 ~~el~~~la~l~G~~~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~----~~~~G~~v~~v~~ 709 (985)
..++++.++++.|.+.+ +.++||..|+.++++++. .++|+||++...++..... +...|++++++..
T Consensus 63 v~~lE~~la~leg~~~a-v~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGGVGA-VATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 55789999999998775 557788877755555432 4779999988766533333 4678999998864
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCCcCCCcEEE
Q 001990 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (985)
Q Consensus 710 ~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g~~g~Di~~ 788 (985)
.+|+++++++|+ ++|++|++++| |+++.+. |+++|+++||++|+++++|++.+ ...+.+|-+.|+||++
T Consensus 134 ----~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~gi~livD~T~~--tP~~~~pl~~GADIvv 203 (432)
T PRK06702 134 ----NLTADEIVALAN---DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELEVPFIVDNTLA--TPYLCQAFEHGANIIV 203 (432)
T ss_pred ----CCCHHHHHHhCC---cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcCCEEEEECCCC--chhhCChhhcCCCEEE
Confidence 369999999998 89999999988 6788887 89999999999999999998763 2234567789999999
Q ss_pred eCCcccccc
Q 001990 789 LNLHKTFCI 797 (985)
Q Consensus 789 ~s~hKtl~~ 797 (985)
.|+.|+++.
T Consensus 204 ~S~TKy~~G 212 (432)
T PRK06702 204 HSTTKYIDG 212 (432)
T ss_pred EccccccCC
Confidence 999999863
No 498
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.46 E-value=1.9e-11 Score=142.33 Aligned_cols=277 Identities=16% Similarity=0.157 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHhhCCCCcceeeccchHHHHHHHHHHhhhh---c----CCCCEEEEcC-CCChhHHHHHHH-h------
Q 001990 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ---K----GKKKTFIIAS-NCHPQTIDICIT-R------ 275 (985)
Q Consensus 211 ~~i~e~q~~ia~L~g~~~~~~sl~~~~ta~~ea~~~a~~~~---~----~~g~~Vlv~~-~~h~s~~~~~~~-~------ 275 (985)
+...++++.+++++|.+ .+.++++||.+.|+++.+.+.. + .++++||+.. .-|.++...+.. .
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 44567888999999875 4778899999999887654321 0 1235666555 677766554420 0
Q ss_pred -hcCCCeEEEEe---Cchhhhc-cCCCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEecccc-ccCCCC-
Q 001990 276 -ADGFDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP- 343 (985)
Q Consensus 276 -a~~~gi~v~~~---~~~~l~~-l~~~t~~V~v~~p-n~~G~i~d----l~~I~~~a~~~galliV~a~~~a-lg~l~~- 343 (985)
.......+..+ |++++++ +.+++++|++.+| |.+|.+.| +++|.++|+++|+++++| +..+ +|....
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D-Ev~~g~g~~g~~ 239 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD-EIQTGLGRTGKL 239 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-chhhCCCCCchH
Confidence 01111233343 4567777 7788999999887 68998886 999999999999999994 2323 432110
Q ss_pred ----CCcccceEEEecCccccccCCCCCCceEEEEEchhhHhcCCCceeeeeecCCCCcceEEecccccccccccccCCC
Q 001990 344 ----PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (985)
Q Consensus 344 ----p~~~GaDi~v~s~k~lg~P~~~GGP~~G~l~~~~~~~~~lp~~~vG~s~d~~g~~~~~l~l~tre~~~rre~atsn 419 (985)
......|+++. +|+|++ |.-.+|++.+++++++.+... .. + ..
T Consensus 240 ~~~~~~g~~~D~~~~-~K~l~g----g~~~ig~v~~~~~~~~~l~~~----------~~-----------------~-~t 286 (401)
T PRK00854 240 LAEEHEGIEADVTLI-GKALSG----GFYPVSAVLSNSEVLGVLKPG----------QH-----------------G-ST 286 (401)
T ss_pred hHHhhcCCCCCEEEe-cccccC----CccCeEEEEEcHHHHhcccCC----------CC-----------------C-CC
Confidence 11234688776 488852 221257788888877655210 00 0 01
Q ss_pred ccch-hHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CC--CcceEEEecCC--HHHHHHHH
Q 001990 420 ICTA-QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LP--FFDTVKVKCAD--AHAIASAA 492 (985)
Q Consensus 420 i~t~-~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~--~~~~~~i~~~~--~~~l~~~L 492 (985)
+|.+ ....+..+++ ..+..+ .+.++..++.+++.+.|++++ ..... .. .+-.+.+..+. ..++.+.|
T Consensus 287 ~~~~~~~~aa~~a~L--~~l~~~---~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L 360 (401)
T PRK00854 287 FGGNPLACAVARAAL--KVLTEE---GMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGARQYCEAL 360 (401)
T ss_pred CCcCHHHHHHHHHHH--HHHHHc---CHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHHHHHHHH
Confidence 1111 1222222332 333222 245677788899999998875 32221 11 11122232222 67899999
Q ss_pred HHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001990 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (985)
Q Consensus 493 ~~~Gi~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 529 (985)
.++||.+.....+.+|++++..+|++||+++++.|..
T Consensus 361 ~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~ 397 (401)
T PRK00854 361 KERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIAK 397 (401)
T ss_pred HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 9999998754468999999999999999999999863
No 499
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.46 E-value=3.2e-12 Score=145.28 Aligned_cols=307 Identities=11% Similarity=0.016 Sum_probs=191.1
Q ss_pred hcHHHHHHHHHHHHHHHhCCCc---cceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCc-H-HHHHhcCc
Q 001990 628 QGYQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-P-ATAAMCGM 702 (985)
Q Consensus 628 ~G~~~~~~el~~~la~l~G~~~---~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~-~-~~~~~~G~ 702 (985)
+.+.+++.++++.|.++++.+. +.++.+||+.+.++++..+.. .+++++|+.. .+|.- . ..++..|+
T Consensus 35 ~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~-------~~g~~vLv~g-~FG~r~~~eia~~~g~ 106 (374)
T TIGR01365 35 KLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG-------CRGVDVLAWE-SFGKGWVTDVTKQLKL 106 (374)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-------CCCCeEEEEC-HHHHHHHHHHHHhcCC
Confidence 3566788999999999999753 246678888888777664421 2456788764 33322 2 44567899
Q ss_pred -EEEEEeCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Q 001990 703 -KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (985)
Q Consensus 703 -~v~~v~~~~~g~iDle~L~~~i~~~~~~t~~Vvi~~p-n~~G~i~~di~eI~~la~~~g~lliVD~a~~~~~~g~~~~g 780 (985)
++..+..+....+|+++++. + ++ |.+++. +.+|+.. |+++|++.+ ++++++||++.+.+...+ ..
T Consensus 107 ~~v~~l~~~~g~~~~~~~ve~--~---~~---v~~vhnETSTGv~n-pv~~i~~~~--~~~lliVDavSs~g~~~l-~~- 173 (374)
T TIGR01365 107 PDVRVLEAEYGKLPDLKKVDF--K---ND---VVFTWNGTTSGVRV-PNGDFIPAD--REGLTICDATSAAFAQDL-DY- 173 (374)
T ss_pred CCcEEEcCCCCCCCCHHHcCC--C---CC---EEEecCCCchheec-ccccccccc--CCCcEEEEccchhcCCCC-Ch-
Confidence 58888776666789999872 2 23 445554 4699998 787766433 489999999875433222 12
Q ss_pred cCCCcEEEeCCcccccccCCCCCCcceeeeecccccCcCC--CCccccC--CCC-C--C---CCCCCCCCCcccccchhh
Q 001990 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP--SHPVVST--GGI-P--A---PEKSQPLGTIAAAPWGSA 850 (985)
Q Consensus 781 ~~g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lp--g~~~g~~--~~~-~--~---~~~~~~t~~i~s~~~g~~ 850 (985)
.++|+++.+.+|.|+. .||+++++++++.++... +....+. .+. . . ......|++++. .
T Consensus 174 -d~iDv~~tgsQK~L~~-----ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~-----v 242 (374)
T TIGR01365 174 -HKLDVVTFSWQKVLGG-----EGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPS-----M 242 (374)
T ss_pred -hHCcEEEEechhccCC-----CCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChH-----H
Confidence 2599999999999964 369999999987654322 1100000 000 0 0 000112333221 1
Q ss_pred hHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhc-c-CCeeEcCCCCceeEEEEEEecCccccCCC-----C---
Q 001990 851 LILPISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-----E--- 919 (985)
Q Consensus 851 ~~~~~A~a~l~~lg~~-gl~~~~~~~~~~a~~l~~~L~~-~-~~i~~~g~~~~~~~~~vv~~~~~~~~~g~-----~--- 919 (985)
..+.++...+..+.++ |+.++.+++.++++.+++.+++ + +.+....+........++.++. .++ +
T Consensus 243 ~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~----~~~~~~~~~~~~ 318 (374)
T TIGR01365 243 LCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVD----PAIDALDEDAQA 318 (374)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCC----ccccccccchhh
Confidence 2223333445555565 7999999999999999999998 5 4443211111111113344321 123 2
Q ss_pred --HHHHHHHHHHCCCccCCCCCC-CCCEEEEeccCCCCHHhhchHHHHHHHHHHHHH
Q 001990 920 --PEDVAKRLMDYGFHGPTMSWP-VPGTLMIEPTESESKVCHNREDLFFQILLSLTK 973 (985)
Q Consensus 920 --~~~l~~~L~e~Gi~~~~~~~p-v~~~lris~t~~~t~eeId~~~~~i~aL~~i~~ 973 (985)
..++.+.|.++||.+..-..+ .+..+||.-.-..+.+||+ .+++.|.=+..
T Consensus 319 ~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~---~l~~~l~~~~~ 372 (374)
T TIGR01365 319 DFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLE---CLCPWLDWAFA 372 (374)
T ss_pred HHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHH---HHHHHHHHHHh
Confidence 578999999999976422222 2378999988889999999 99998875543
No 500
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.46 E-value=2.9e-11 Score=141.57 Aligned_cols=295 Identities=15% Similarity=0.181 Sum_probs=172.3
Q ss_pred HHHHHHHHHHhCCC--ccceecChHHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCcHHHHHhcC-----------
Q 001990 635 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----------- 701 (985)
Q Consensus 635 ~el~~~la~l~G~~--~~~~~~~sGa~g~~a~l~air~~~~~~g~~~~~~Vlv~~~~Hg~~~~~~~~~G----------- 701 (985)
.++.++++++.+.+ ...++.+||+++++.++..+|.|. ++++.|.+..++||.........+
T Consensus 87 ~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~-----~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK08088 87 LELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT-----KRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGL 161 (425)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh-----CCCeEEEECCccCCccHHHHHhhCCCCccccCCCC
Confidence 37778888887643 245778999999999988888762 233344457789998765543222
Q ss_pred ----cEEEEEeCCCCCCCC----HHHHHHHHHh--cCCCeEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEEc
Q 001990 702 ----MKIVSVGTDAKGNIN----IEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (985)
Q Consensus 702 ----~~v~~v~~~~~g~iD----le~L~~~i~~--~~~~t~~Vvi~~p-n~~G~i~~---di~eI~~la~~~g~lliVD~ 767 (985)
+....+|.+.++ .+ +++|+++++. +.+++++|+++.. +..|.+.+ .+++|.++|+++|+++|.|+
T Consensus 162 ~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 162 MPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 111112222221 12 5678888862 2366777776532 23455541 39999999999999999999
Q ss_pred cccccccCCCCCC------cC--CCcEEEeCCcccccccCCCCCCcceeeeecccccCcCCCCccccCCCCCCCCCCCCC
Q 001990 768 ANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 839 (985)
Q Consensus 768 a~~~~~~g~~~~g------~~--g~Di~~~s~hKtl~~p~g~GGPg~G~l~~~~~l~~~lpg~~~g~~~~~~~~~~~~~t 839 (985)
++. ++ ..++ .. -+|+.++ .|+++ +|.++|++++++++++.+..... .
T Consensus 241 v~~-g~---g~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~v~~~~~~~~~~~~~~~--------------~ 295 (425)
T PRK08088 241 VQT-GA---GRTGTLFAMEQMGVAADLTTF--AKSIA-----GGFPLAGVTGRAEVMDAIAPGGL--------------G 295 (425)
T ss_pred ccc-CC---CcCcchhHHhhcCCCCCEEEE--ecccc-----CCCcceeeEecHHHHhhcCCCCC--------------C
Confidence 874 22 1121 12 2565444 58874 45679999998887765532110 0
Q ss_pred CCcccccchhhhHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhc---cCCee--EcCCCCceeEEEEEEecC-c-
Q 001990 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPIL--FRGVNGTVAHEFIVDLRG-L- 912 (985)
Q Consensus 840 ~~i~s~~~g~~~~~~~A~a~l~~lg~~gl~~~~~~~~~~a~~l~~~L~~---~~~i~--~~g~~~~~~~~~vv~~~~-~- 912 (985)
.... +++...+++.++|..+..+.+. ++.....+++++.|.+ .++.. ..+. +.. +-+.+.. .
T Consensus 296 ~t~~----~~~~~~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~---~~l~l~~~~~ 364 (425)
T PRK08088 296 GTYA----GNPIACAAALAVLKVFEQENLL---QKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAM---IAIELFEDGD 364 (425)
T ss_pred CCCC----cCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceE---EEEEEecCCC
Confidence 1111 2334445555666665444333 3334445555555543 22221 1122 222 2222210 0
Q ss_pred -cccCCCCHHHHHHHHHHCCCccCCCCCCCCCEEEEeccCCCCHHhhchHHHHHHHHHHHHHHH
Q 001990 913 -KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKVCHNREDLFFQILLSLTKFT 975 (985)
Q Consensus 913 -~~~~g~~~~~l~~~L~e~Gi~~~~~~~pv~~~lris~t~~~t~eeId~~~~~i~aL~~i~~~~ 975 (985)
+.........+.+.+.++|+.+.... +.++.+|++++..+|++||+ +.++.|.+++.++
T Consensus 365 ~~~p~~~~~~~l~~~~~~~Gv~~~~~~-~~~~~iRl~~~~~~t~~ei~---~~i~~l~~~l~~~ 424 (425)
T PRK08088 365 HSKPNAKLTAQIVARARDKGLILLSCG-PYYNVLRILVPLTIEDAQIR---QGLEIIAQCFDEA 424 (425)
T ss_pred CCCCCHHHHHHHHHHHHhCCCEEecCC-CCCCEEEEECCCCcCHHHHH---HHHHHHHHHHHhh
Confidence 00001225678889999998753221 12488999999999999999 9999999887653
Done!