Query 001992
Match_columns 985
No_of_seqs 153 out of 249
Neff 4.1
Searched_HMMs 46136
Date Thu Mar 28 14:04:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001992.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001992hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07378 MPP_ACP5 Homo sapiens 99.9 2.3E-24 5E-29 226.5 16.3 216 382-644 1-238 (277)
2 cd00839 MPP_PAPs purple acid p 99.9 4.5E-24 9.8E-29 225.7 17.4 222 379-643 2-243 (294)
3 PTZ00422 glideosome-associated 99.9 4.8E-24 1E-28 238.5 17.5 228 377-649 22-289 (394)
4 PLN02533 probable purple acid 99.9 6.7E-23 1.5E-27 232.0 19.7 214 373-640 131-361 (427)
5 KOG1378 Purple acid phosphatas 99.8 9.7E-20 2.1E-24 205.5 19.6 216 378-645 144-388 (452)
6 KOG2679 Purple (tartrate-resis 99.7 6.2E-18 1.3E-22 180.2 12.6 224 377-649 39-285 (336)
7 cd07395 MPP_CSTP1 Homo sapiens 99.7 2.3E-16 5E-21 165.7 17.8 178 421-640 48-237 (262)
8 cd07402 MPP_GpdQ Enterobacter 99.7 1.2E-15 2.6E-20 156.9 16.1 170 421-641 39-214 (240)
9 cd07396 MPP_Nbla03831 Homo sap 99.7 2.2E-15 4.7E-20 160.1 17.9 137 485-639 74-246 (267)
10 PRK11148 cyclic 3',5'-adenosin 99.6 2E-14 4.4E-19 153.2 17.3 199 378-639 11-225 (275)
11 cd07401 MPP_TMEM62_N Homo sapi 99.6 1.9E-14 4.1E-19 152.8 14.1 128 485-621 77-217 (256)
12 cd07399 MPP_YvnB Bacillus subt 99.5 2.7E-13 5.8E-18 140.4 14.0 126 422-619 35-166 (214)
13 cd00842 MPP_ASMase acid sphing 99.5 2.8E-13 6E-18 145.1 12.3 166 421-616 67-263 (296)
14 PF00149 Metallophos: Calcineu 99.5 7.9E-14 1.7E-18 126.4 6.5 193 382-614 1-200 (200)
15 cd07393 MPP_DR1119 Deinococcus 99.4 2.8E-12 6.2E-17 134.2 14.0 134 484-636 72-225 (232)
16 COG1409 Icc Predicted phosphoh 99.3 7.7E-11 1.7E-15 122.5 15.9 178 383-614 2-193 (301)
17 cd08163 MPP_Cdc1 Saccharomyces 99.2 7.6E-11 1.6E-15 126.4 14.1 120 485-619 85-233 (257)
18 cd07383 MPP_Dcr2 Saccharomyces 99.2 1.5E-10 3.2E-15 117.8 12.5 77 542-618 88-180 (199)
19 cd07392 MPP_PAE1087 Pyrobaculu 99.2 2.4E-10 5.3E-15 112.5 13.3 111 486-615 54-174 (188)
20 PRK11340 phosphodiesterase Yae 99.1 1.3E-09 2.7E-14 117.1 16.6 196 379-648 47-261 (271)
21 cd07385 MPP_YkuE_C Bacillus su 99.1 2.6E-09 5.7E-14 109.0 15.1 198 381-648 1-214 (223)
22 TIGR03767 P_acnes_RR metalloph 99.0 1.2E-08 2.6E-13 117.8 20.1 125 522-650 291-430 (496)
23 TIGR03729 acc_ester putative p 99.0 2.6E-09 5.7E-14 111.9 11.7 64 547-615 148-222 (239)
24 cd07388 MPP_Tt1561 Thermus the 98.9 3.3E-08 7.2E-13 104.7 16.7 174 382-613 5-190 (224)
25 cd07404 MPP_MS158 Microscilla 98.8 2.5E-08 5.3E-13 98.4 9.9 52 566-617 97-152 (166)
26 cd07400 MPP_YydB Bacillus subt 98.7 3.8E-08 8.2E-13 94.4 8.6 49 569-618 81-129 (144)
27 cd00840 MPP_Mre11_N Mre11 nucl 98.6 1.1E-07 2.5E-12 96.3 9.5 123 485-617 77-204 (223)
28 cd00838 MPP_superfamily metall 98.6 1.7E-07 3.7E-12 84.7 9.4 50 569-619 70-120 (131)
29 TIGR03768 RPA4764 metallophosp 98.6 6.7E-07 1.4E-11 103.1 15.2 88 524-612 294-409 (492)
30 COG1408 Predicted phosphohydro 98.5 7.1E-07 1.5E-11 97.7 11.2 208 377-649 40-273 (284)
31 cd07379 MPP_239FB Homo sapiens 98.4 1E-06 2.2E-11 84.7 7.8 48 565-615 67-117 (135)
32 cd07384 MPP_Cdc1_like Saccharo 98.0 1.3E-05 2.9E-10 81.3 8.3 35 569-621 119-153 (171)
33 cd08166 MPP_Cdc1_like_1 unchar 98.0 1.6E-05 3.5E-10 83.2 8.3 42 569-620 112-153 (195)
34 PF09423 PhoD: PhoD-like phosp 97.9 0.00014 2.9E-09 83.8 14.3 54 521-576 252-326 (453)
35 cd07397 MPP_DevT Myxococcus xa 97.7 0.0004 8.7E-09 74.9 13.4 58 561-618 142-212 (238)
36 cd08164 MPP_Ted1 Saccharomyces 97.7 6.8E-05 1.5E-09 78.5 6.6 32 569-618 129-160 (193)
37 cd08165 MPP_MPPE1 human MPPE1 97.6 9.6E-05 2.1E-09 74.0 6.3 34 569-620 107-140 (156)
38 COG2129 Predicted phosphoester 97.5 0.0022 4.7E-08 68.8 15.1 177 381-618 3-191 (226)
39 cd07403 MPP_TTHA0053 Thermus t 97.4 0.00081 1.8E-08 65.3 9.8 49 567-618 57-107 (129)
40 cd07406 MPP_CG11883_N Drosophi 97.4 0.0029 6.3E-08 68.0 14.0 133 487-642 73-228 (257)
41 cd00841 MPP_YfcE Escherichia c 97.4 0.00072 1.6E-08 66.0 8.5 59 565-639 74-132 (155)
42 cd00845 MPP_UshA_N_like Escher 97.3 0.0086 1.9E-07 63.1 16.7 119 484-617 70-209 (252)
43 PF12850 Metallophos_2: Calcin 97.3 0.00053 1.1E-08 65.8 6.8 60 565-639 80-139 (156)
44 PRK05340 UDP-2,3-diacylglucosa 97.3 0.0011 2.4E-08 70.2 9.4 18 600-617 185-202 (241)
45 COG1768 Predicted phosphohydro 97.3 0.0044 9.6E-08 64.8 13.1 48 564-619 157-204 (230)
46 KOG1432 Predicted DNA repair e 97.2 0.011 2.3E-07 67.0 16.3 217 377-643 49-333 (379)
47 PF14582 Metallophos_3: Metall 97.2 0.001 2.2E-08 71.6 7.7 161 422-613 32-217 (255)
48 TIGR01854 lipid_A_lpxH UDP-2,3 97.1 0.0049 1.1E-07 65.1 12.2 34 600-636 183-216 (231)
49 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.0 0.01 2.3E-07 64.8 13.7 51 565-618 164-233 (262)
50 TIGR00040 yfcE phosphoesterase 96.9 0.0034 7.3E-08 62.1 8.6 14 600-613 104-117 (158)
51 cd07411 MPP_SoxB_N Thermus the 96.9 0.02 4.4E-07 61.7 14.5 112 489-614 87-219 (264)
52 cd07410 MPP_CpdB_N Escherichia 96.8 0.026 5.7E-07 60.9 14.8 122 488-615 86-231 (277)
53 cd07389 MPP_PhoD Bacillus subt 96.8 0.0063 1.4E-07 63.2 9.4 25 520-544 145-169 (228)
54 cd07398 MPP_YbbF-LpxH Escheric 96.6 0.0026 5.6E-08 65.1 5.0 35 595-636 181-216 (217)
55 TIGR00619 sbcd exonuclease Sbc 96.6 0.0076 1.6E-07 65.0 8.8 17 485-501 76-92 (253)
56 TIGR00583 mre11 DNA repair pro 96.5 0.025 5.5E-07 65.4 12.4 41 566-615 201-241 (405)
57 cd07408 MPP_SA0022_N Staphyloc 96.3 0.087 1.9E-06 56.6 14.5 122 484-616 70-215 (257)
58 COG2908 Uncharacterized protei 96.2 0.017 3.7E-07 62.6 8.5 30 600-636 185-214 (237)
59 cd07409 MPP_CD73_N CD73 ecto-5 96.1 0.12 2.6E-06 56.5 14.8 117 484-615 82-219 (281)
60 PHA02546 47 endonuclease subun 96.1 0.039 8.5E-07 62.0 11.2 14 484-497 76-89 (340)
61 PRK10966 exonuclease subunit S 95.9 0.0092 2E-07 68.8 5.3 23 485-507 75-97 (407)
62 KOG3770 Acid sphingomyelinase 95.9 0.054 1.2E-06 64.9 11.6 97 518-617 301-408 (577)
63 cd07394 MPP_Vps29 Homo sapiens 95.8 0.045 9.8E-07 56.2 9.4 16 600-615 104-119 (178)
64 COG0420 SbcD DNA repair exonuc 95.2 0.013 2.7E-07 66.5 2.9 52 422-501 40-92 (390)
65 cd07382 MPP_DR1281 Deinococcus 95.0 0.87 1.9E-05 50.0 16.1 116 483-614 57-178 (255)
66 PRK09419 bifunctional 2',3'-cy 94.0 0.86 1.9E-05 59.3 15.6 188 380-615 659-883 (1163)
67 cd07407 MPP_YHR202W_N Saccharo 93.9 1.2 2.5E-05 49.5 14.4 85 522-614 136-231 (282)
68 cd07425 MPP_Shelphs Shewanella 93.5 0.039 8.5E-07 58.0 2.0 49 421-496 31-79 (208)
69 cd07405 MPP_UshA_N Escherichia 93.4 1.8 3.8E-05 47.8 14.6 50 564-615 173-222 (285)
70 cd07412 MPP_YhcR_N Bacillus su 93.3 3.4 7.4E-05 45.6 16.5 52 564-616 191-243 (288)
71 PRK04036 DNA polymerase II sma 93.1 0.087 1.9E-06 62.5 4.3 55 379-433 241-295 (504)
72 cd07390 MPP_AQ1575 Aquifex aeo 93.0 0.092 2E-06 53.0 3.7 36 564-617 105-140 (168)
73 cd07391 MPP_PF1019 Pyrococcus 92.7 0.094 2E-06 53.0 3.3 15 422-436 41-55 (172)
74 PRK09453 phosphodiesterase; Pr 92.0 0.22 4.7E-06 50.7 4.9 13 601-613 117-129 (182)
75 PRK09558 ushA bifunctional UDP 90.9 3.6 7.8E-05 49.4 14.3 50 564-615 209-258 (551)
76 cd07380 MPP_CWF19_N Schizosacc 90.8 0.79 1.7E-05 46.6 7.4 49 566-617 69-126 (150)
77 cd07386 MPP_DNA_pol_II_small_a 90.8 0.23 5E-06 52.9 3.8 18 601-618 190-207 (243)
78 COG0737 UshA 5'-nucleotidase/2 89.7 9.2 0.0002 45.6 16.1 119 489-614 107-247 (517)
79 COG4186 Predicted phosphoester 89.3 1.2 2.6E-05 46.4 7.4 43 563-613 105-147 (186)
80 TIGR01530 nadN NAD pyrophospha 89.2 4.2 9E-05 49.1 12.9 112 487-615 84-219 (550)
81 cd08162 MPP_PhoA_N Synechococc 86.8 6.2 0.00013 44.5 11.7 38 565-615 208-245 (313)
82 KOG3662 Cell division control 86.3 1.2 2.5E-05 52.2 5.8 83 377-497 44-144 (410)
83 TIGR01390 CycNucDiestase 2',3' 85.6 9.6 0.00021 46.9 13.4 45 565-614 196-240 (626)
84 cd07381 MPP_CapA CapA and rela 85.0 18 0.00038 38.6 13.5 132 483-619 76-224 (239)
85 TIGR00282 metallophosphoestera 84.9 35 0.00076 38.1 16.1 49 553-613 132-180 (266)
86 cd07424 MPP_PrpA_PrpB PrpA and 84.2 1.4 2.9E-05 46.1 4.6 18 422-439 28-45 (207)
87 smart00854 PGA_cap Bacterial c 83.6 22 0.00048 38.1 13.6 132 484-620 73-223 (239)
88 COG0622 Predicted phosphoester 82.8 5.9 0.00013 41.3 8.6 43 563-613 78-120 (172)
89 PHA02239 putative protein phos 82.3 1.5 3.3E-05 47.4 4.3 19 423-441 30-48 (235)
90 COG3540 PhoD Phosphodiesterase 82.0 3.4 7.4E-05 49.3 7.2 46 380-439 138-185 (522)
91 cd00144 MPP_PPP_family phospho 80.6 2.3 5E-05 44.0 4.7 17 422-438 24-40 (225)
92 TIGR00024 SbcD_rel_arch putati 79.2 1.8 3.9E-05 46.6 3.5 16 422-437 58-73 (225)
93 PRK09418 bifunctional 2',3'-cy 79.0 24 0.00053 44.8 13.6 46 565-615 245-290 (780)
94 PRK09420 cpdB bifunctional 2', 77.3 25 0.00055 43.6 12.9 45 565-614 219-263 (649)
95 PRK09419 bifunctional 2',3'-cy 75.7 30 0.00066 45.6 13.6 48 565-616 235-282 (1163)
96 COG1311 HYS2 Archaeal DNA poly 75.0 2 4.4E-05 51.0 2.7 93 378-496 222-320 (481)
97 PRK00166 apaH diadenosine tetr 72.4 4.7 0.0001 44.8 4.6 18 422-439 28-45 (275)
98 COG1407 Predicted ICC-like pho 71.8 2.4 5.2E-05 46.4 2.1 79 383-496 21-109 (235)
99 PRK09968 serine/threonine-spec 67.0 3.8 8.3E-05 43.5 2.4 19 421-439 41-59 (218)
100 cd07413 MPP_PA3087 Pseudomonas 66.4 5.6 0.00012 42.4 3.5 17 422-438 33-49 (222)
101 PF10230 DUF2305: Uncharacteri 64.9 13 0.00028 40.8 6.0 21 485-509 3-23 (266)
102 KOG2310 DNA repair exonuclease 62.3 62 0.0014 39.8 11.1 52 379-443 11-74 (646)
103 cd07422 MPP_ApaH Escherichia c 60.0 8.1 0.00018 42.6 3.4 19 421-439 25-43 (257)
104 KOG4419 5' nucleotidase [Nucle 58.2 53 0.0011 40.6 9.8 127 479-618 120-275 (602)
105 PRK11907 bifunctional 2',3'-cy 54.2 99 0.0022 39.8 11.7 45 565-614 310-354 (814)
106 PRK11439 pphA serine/threonine 54.1 8.1 0.00018 40.9 2.1 43 383-439 18-61 (218)
107 PRK13625 bis(5'-nucleosyl)-tet 53.6 10 0.00022 41.1 2.7 51 384-439 3-53 (245)
108 cd07423 MPP_PrpE Bacillus subt 52.9 11 0.00024 40.3 2.8 18 422-439 37-54 (234)
109 PF09587 PGA_cap: Bacterial ca 51.8 2.4E+02 0.0052 30.5 12.8 133 483-620 74-234 (250)
110 cd07387 MPP_PolD2_C PolD2 (DNA 46.2 26 0.00056 38.9 4.5 56 383-438 1-58 (257)
111 cd07421 MPP_Rhilphs Rhilph pho 44.2 25 0.00055 40.1 4.1 25 422-446 34-58 (304)
112 PF14362 DUF4407: Domain of un 37.1 42 0.0009 37.3 4.4 99 29-145 8-107 (301)
113 TIGR00668 apaH bis(5'-nucleosy 36.8 25 0.00055 39.6 2.7 21 421-441 27-47 (279)
114 PF07819 PGAP1: PGAP1-like pro 28.9 1.8E+02 0.0038 31.4 7.3 80 483-574 3-93 (225)
115 KOG3724 Negative regulator of 27.3 1.3E+02 0.0028 38.8 6.6 85 480-574 85-190 (973)
116 cd03231 ABC_CcmA_heme_exporter 26.4 1.2E+02 0.0027 31.4 5.5 41 535-576 146-186 (201)
117 cd03232 ABC_PDR_domain2 The pl 23.6 1.5E+02 0.0032 30.6 5.4 41 535-576 129-169 (192)
118 TIGR02673 FtsE cell division A 23.3 1.3E+02 0.0028 31.2 4.9 41 535-576 158-198 (214)
119 TIGR01189 ccmA heme ABC export 22.0 1.7E+02 0.0036 30.2 5.4 41 535-576 148-188 (198)
120 PRK13543 cytochrome c biogenes 21.0 1.7E+02 0.0036 30.7 5.2 44 535-579 158-201 (214)
121 TIGR01166 cbiO cobalt transpor 20.5 1.7E+02 0.0038 29.8 5.1 41 535-576 148-188 (190)
122 PF07717 OB_NTP_bind: Oligonuc 20.2 40 0.00086 31.8 0.4 32 250-281 80-111 (114)
123 TIGR02106 cyd_oper_ybgT cyd op 20.1 58 0.0013 25.6 1.2 10 99-108 1-10 (30)
No 1
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.92 E-value=2.3e-24 Score=226.53 Aligned_cols=216 Identities=19% Similarity=0.226 Sum_probs=150.4
Q ss_pred eEEEEEeccCCC-CCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCC
Q 001992 382 LWFDFMADTGDG-GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWY 460 (985)
Q Consensus 382 lwFd~VADtGDG-~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~ 460 (985)
+.|.++||+|.+ .+.+.+++..|++... ..++||+|++||++|+.+...++..++.+.|+..+..
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~----------~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~---- 66 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAA----------ELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA---- 66 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHH----------hcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc----
Confidence 469999999987 6788889998887542 1356999999999999987655555555556554321
Q ss_pred cccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCC-----cEEE
Q 001992 461 KKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPK-----GWWV 535 (985)
Q Consensus 461 ~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~-----~wWL 535 (985)
++ ...| +++||||||+.++..+...+.... ....|.+| ..||+++.+. +++|
T Consensus 67 ------------------~~-~~~P-~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~~~--~~~y~~~~~~~~~~~~~~~ 123 (277)
T cd07378 67 ------------------PS-LQVP-WYLVLGNHDYSGNVSAQIDYTKRP-NSPRWTMP--AYYYRVSFPFPSSDTTVEF 123 (277)
T ss_pred ------------------hh-hcCC-eEEecCCcccCCCchheeehhccC-CCCCccCc--chheEEEeecCCCCCEEEE
Confidence 11 1334 999999999987754433222110 12335554 4588999874 6999
Q ss_pred EEEecCCC---------------CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhh-
Q 001992 536 FGLDLALH---------------CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL- 599 (985)
Q Consensus 536 lGLDsql~---------------gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L- 599 (985)
++|||+.. +.+...|++||++.+++ .+++++||++|||.+..+..... ......+++++
T Consensus 124 i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~--~~~~~~iv~~H~P~~~~~~~~~~---~~~~~~l~~l~~ 198 (277)
T cd07378 124 IMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAA--STADWKIVVGHHPIYSSGEHGPT---SCLVDRLLPLLK 198 (277)
T ss_pred EEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHh--cCCCeEEEEeCccceeCCCCCCc---HHHHHHHHHHHH
Confidence 99999853 23467999999999974 23489999999999977543211 12233444444
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcCccc
Q 001992 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPT 644 (985)
Q Consensus 600 ~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGAfLhPT 644 (985)
+++|+++|+||+|.|+++.... .+.++||+|+||+.....
T Consensus 199 ~~~v~~vl~GH~H~~~~~~~~~-----~~~~~i~~G~~~~~~~~~ 238 (277)
T cd07378 199 KYKVDAYLSGHDHNLQHIKDDG-----SGTSFVVSGAGSKARPSV 238 (277)
T ss_pred HcCCCEEEeCCcccceeeecCC-----CCcEEEEeCCCcccCCCC
Confidence 5689999999999999987543 234889999888754443
No 2
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.91 E-value=4.5e-24 Score=225.73 Aligned_cols=222 Identities=17% Similarity=0.222 Sum_probs=146.7
Q ss_pred CCceEEEEEeccCC-CCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCCh--hhhhhccccchhhhcC
Q 001992 379 KEDLWFDFMADTGD-GGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA--FTYERRLFRPFEYALQ 455 (985)
Q Consensus 379 d~~lwFd~VADtGD-G~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~--e~Y~~Rf~~PYe~Al~ 455 (985)
+.++.|.++||+|. +.++..++..+.++ . +++|+++++||++|..+.. ++++ .|++.++...
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~-~------------~~~d~vl~~GDl~~~~~~~~~~~~~-~~~~~~~~~~- 66 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKE-L------------GNYDAILHVGDLAYADGYNNGSRWD-TFMRQIEPLA- 66 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhc-c------------CCccEEEEcCchhhhcCCccchhHH-HHHHHHHHHH-
Confidence 57899999999997 45566666666544 1 3569999999999988764 3332 3333332111
Q ss_pred CCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHH-HHhhcccc-CCccccCCCcceEEEECCCcE
Q 001992 456 PPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFM-RFICHKSW-LGGWFMPQKKSYFALQLPKGW 533 (985)
Q Consensus 456 ~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~-R~F~~r~~-lgGW~mpQ~~SYFAlrLP~~w 533 (985)
...+++++|||||......... +.+..+.. ...-.......||+++.+. +
T Consensus 67 ---------------------------~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~-v 118 (294)
T cd00839 67 ---------------------------SYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGP-V 118 (294)
T ss_pred ---------------------------hcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCC-E
Confidence 1234999999999876533211 11000000 0000111345699999996 8
Q ss_pred EEEEEecCCCC---CCCHHHHHHHHHHHHhhcC-CCCeEEEEecCCCCccccccccC-cchhhHHHHHhhh-CCceeEEE
Q 001992 534 WVFGLDLALHC---DIDVYQFKFFAELVKEQVG-ERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KGRCKLRI 607 (985)
Q Consensus 534 WLlGLDsql~g---dID~~Q~~wF~~ll~~~v~-~~d~VIL~tHeP~w~~~~~~~~~-~~~~l~~lle~~L-~~RV~L~L 607 (985)
++++||++... .+..+|++|+++.+++.-+ ..+|+|+++|+|.|..+...... .....+..+++++ +++|+++|
T Consensus 119 ~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl 198 (294)
T cd00839 119 HFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVL 198 (294)
T ss_pred EEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEE
Confidence 99999998654 6778999999999874222 23689999999999876543221 1223334555665 67999999
Q ss_pred cCccCCCcceeecCCC---------CCcccceEEEecCCCCcCcc
Q 001992 608 AGDMHHYMRHSYVPSD---------GPVYVQHLLVNGCGGAFLHP 643 (985)
Q Consensus 608 SGHiHhY~R~~~~~~~---------G~~~~~~~IVsGGGGAfLhP 643 (985)
+||+|.|+|..|..+. ....++.+||+|+||+-+.+
T Consensus 199 ~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~ 243 (294)
T cd00839 199 SGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGL 243 (294)
T ss_pred EccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCc
Confidence 9999999999885321 11246689999999997764
No 3
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.91 E-value=4.8e-24 Score=238.45 Aligned_cols=228 Identities=16% Similarity=0.137 Sum_probs=164.0
Q ss_pred CCCCceEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcCC
Q 001992 377 SEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQP 456 (985)
Q Consensus 377 ~~d~~lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~ 456 (985)
..++.+.|..+||.|.|...|++||..|++-..+ -+.||++..||+. ++|-....+.||.+-||..+.+
T Consensus 22 ~~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~----------~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~ 90 (394)
T PTZ00422 22 SVKAQLRFASLGNWGTGSKQQKLVASYLKQYAKN----------ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSE 90 (394)
T ss_pred ccCCeEEEEEEecCCCCchhHHHHHHHHHHHHHh----------CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccC
Confidence 4578899999999999999999999999976532 2569999999997 7776666677777777665532
Q ss_pred CCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcc----------------ccCCccccCC
Q 001992 457 PPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHK----------------SWLGGWFMPQ 520 (985)
Q Consensus 457 ~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r----------------~~lgGW~mpQ 520 (985)
+ . ..+.-| +|+++|||||..+.++++...-+. ..-..|.||.
T Consensus 91 ~-------------s--------~~L~~P-wy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~ 148 (394)
T PTZ00422 91 E-------------S--------GDMQIP-FFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN 148 (394)
T ss_pred c-------------c--------hhhCCC-eEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc
Confidence 1 1 012334 999999999998888888422110 1135699995
Q ss_pred CcceEEEE----CC------------CcEEEEEEecCCCC------CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCc
Q 001992 521 KKSYFALQ----LP------------KGWWVFGLDLALHC------DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWL 578 (985)
Q Consensus 521 ~~SYFAlr----LP------------~~wWLlGLDsql~g------dID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~ 578 (985)
+ ||.+. .+ ...-++.+||.... +....|.+|+++.++.+....+|+||+.|||.|+
T Consensus 149 ~--yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIyS 226 (394)
T PTZ00422 149 Y--WYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYS 226 (394)
T ss_pred h--hheeeeeeecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhccCCCeEEEEecCceee
Confidence 5 77642 11 12678999997432 2346789999998863344468999999999999
Q ss_pred cccccccCcchhhHHHHHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcCc-ccccCCC
Q 001992 579 LDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLH-PTHVFSN 649 (985)
Q Consensus 579 ~~~~~~~~~~~~l~~lle~~L-~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGAfLh-PTH~~~~ 649 (985)
.+.++++ ..+...++++| +++|+++||||.|+|||.... +.+||||||||+... +.+..+.
T Consensus 227 sG~hg~~---~~L~~~L~PLL~ky~VdlYisGHDH~lq~i~~~-------gt~yIvSGaGs~~~~~~~~~~~~ 289 (394)
T PTZ00422 227 SGSSKGD---SYLSYYLLPLLKDAQVDLYISGYDRNMEVLTDE-------GTAHINCGSGGNSGRKSIMKNSK 289 (394)
T ss_pred cCCCCCC---HHHHHHHHHHHHHcCcCEEEEccccceEEecCC-------CceEEEeCccccccCCCCCCCCC
Confidence 9876532 22555667777 689999999999999997532 248999999997443 3433333
No 4
>PLN02533 probable purple acid phosphatase
Probab=99.90 E-value=6.7e-23 Score=231.97 Aligned_cols=214 Identities=20% Similarity=0.299 Sum_probs=146.2
Q ss_pred ccccCCCCceEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhh--hccccch
Q 001992 373 YDHLSEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYE--RRLFRPF 450 (985)
Q Consensus 373 ~~~~~~d~~lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~--~Rf~~PY 450 (985)
|.-.+.+.++.|.++||+|.+.....+++.+.+ .++|+++++||++|.+......+ .++++|+
T Consensus 131 F~T~p~~~~~~f~v~GDlG~~~~~~~tl~~i~~---------------~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l 195 (427)
T PLN02533 131 FRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSK---------------WDYDVFILPGDLSYANFYQPLWDTFGRLVQPL 195 (427)
T ss_pred EECCCCCCCeEEEEEEeCCCCcccHHHHHHHHh---------------cCCCEEEEcCccccccchHHHHHHHHHHhhhH
Confidence 333334568999999999977655545554421 24599999999999754321111 1222332
Q ss_pred hhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh----hHHHHHhhccccCCccccCCC-----
Q 001992 451 EYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL----NTFMRFICHKSWLGGWFMPQK----- 521 (985)
Q Consensus 451 e~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL----~aF~R~F~~r~~lgGW~mpQ~----- 521 (985)
. . ..| ++++|||||..... ..|. .....|.||..
T Consensus 196 ~-----------------------------s-~~P-~m~~~GNHE~~~~~~~~~~~f~------~y~~rf~mP~~~~g~~ 238 (427)
T PLN02533 196 A-----------------------------S-QRP-WMVTHGNHELEKIPILHPEKFT------AYNARWRMPFEESGST 238 (427)
T ss_pred h-----------------------------h-cCc-eEEeCccccccccccccCcCcc------chhhcccCCccccCCC
Confidence 1 0 224 99999999975321 1111 11234677753
Q ss_pred -cceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcC--CCCeEEEEecCCCCccccccccCc-chhhHHHHHh
Q 001992 522 -KSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG--ERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICD 597 (985)
Q Consensus 522 -~SYFAlrLP~~wWLlGLDsql~gdID~~Q~~wF~~ll~~~v~--~~d~VIL~tHeP~w~~~~~~~~~~-~~~l~~lle~ 597 (985)
..||+++.+. +++++||++.....+.+|++||++.|++ .+ ..+|+|++.|+|.|..+..+..+. ...++..+++
T Consensus 239 ~~~yYSfd~g~-vhfI~Lds~~~~~~~~~Q~~WLe~dL~~-~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~ 316 (427)
T PLN02533 239 SNLYYSFNVYG-VHIIMLGSYTDFEPGSEQYQWLENNLKK-IDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMET 316 (427)
T ss_pred CCceEEEEECC-EEEEEEeCCccccCchHHHHHHHHHHHh-hcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHH
Confidence 2499999986 8999999998777789999999999974 33 347899999999998765432211 1234456667
Q ss_pred hh-CCceeEEEcCccCCCcceeecCCCC-CcccceEEEecCCCCc
Q 001992 598 YL-KGRCKLRIAGDMHHYMRHSYVPSDG-PVYVQHLLVNGCGGAF 640 (985)
Q Consensus 598 ~L-~~RV~L~LSGHiHhY~R~~~~~~~G-~~~~~~~IVsGGGGAf 640 (985)
++ +++|+|+|+||+|.|+|..|..... ..+++.|||+|+||..
T Consensus 317 Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~ 361 (427)
T PLN02533 317 LLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNR 361 (427)
T ss_pred HHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccc
Confidence 66 7899999999999999998875321 1346799999999974
No 5
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=99.83 E-value=9.7e-20 Score=205.45 Aligned_cols=216 Identities=17% Similarity=0.234 Sum_probs=157.8
Q ss_pred CCCceEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChh-hh--hhccccchhhhc
Q 001992 378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAF-TY--ERRLFRPFEYAL 454 (985)
Q Consensus 378 ~d~~lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e-~Y--~~Rf~~PYe~Al 454 (985)
++.+..|++.||+|....++-+...+++.+ .+|++++.||++|..+..+ .. -.|+++|..+
T Consensus 144 ~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~--------------k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As-- 207 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPYTSTLRNQEENL--------------KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIAS-- 207 (452)
T ss_pred ccCceeEEEEccccccccccchHhHHhccc--------------CCcEEEEecchhhcCCCCccchHHHHhhhhhhhc--
Confidence 458899999999999988877777766553 3599999999999986542 22 2566788743
Q ss_pred CCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcc------eEEEE
Q 001992 455 QPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKS------YFALQ 528 (985)
Q Consensus 455 ~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~S------YFAlr 528 (985)
..| .+++.||||.----+. |-......|.||-+.| ||+++
T Consensus 208 ----------------------------~vP-ymv~~GNHE~d~~~~~-----~F~~y~~Rf~mP~~~s~s~~~l~YSfd 253 (452)
T KOG1378|consen 208 ----------------------------YVP-YMVCSGNHEIDWPPQP-----CFVPYSARFNMPGNSSESDSNLYYSFD 253 (452)
T ss_pred ----------------------------cCc-eEEecccccccCCCcc-----cccccceeeccCCCcCCCCCceeEEEe
Confidence 234 9999999986211111 2222344578886554 99999
Q ss_pred CCCcEEEEEEecCCCCC--CCHHHHHHHHHHHHhhcCC--CCeEEEEecCCCCcccc--ccccCcchhhHHHHHhhh-CC
Q 001992 529 LPKGWWVFGLDLALHCD--IDVYQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDW--YFNNVSGKNVKHLICDYL-KG 601 (985)
Q Consensus 529 LP~~wWLlGLDsql~gd--ID~~Q~~wF~~ll~~~v~~--~d~VIL~tHeP~w~~~~--~~~~~~~~~l~~lle~~L-~~ 601 (985)
+.. .++++|+|..... .-.+|++||++.|+ +++. .+|+|++.|.|.|.+.. +...-.....+..+|++| ++
T Consensus 254 ~G~-vhfv~lsse~~~~~~~~~~QY~WL~~dL~-~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~ 331 (452)
T KOG1378|consen 254 VGG-VHFVVLSTETYYNFLKGTAQYQWLERDLA-SVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKY 331 (452)
T ss_pred ecc-EEEEEEeccccccccccchHHHHHHHHHH-HhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHh
Confidence 997 7999999987643 34689999999996 4665 59999999999999986 321111123445677777 89
Q ss_pred ceeEEEcCccCCCcceeecCCC------C-----CcccceEEEecCCCC--cCcccc
Q 001992 602 RCKLRIAGDMHHYMRHSYVPSD------G-----PVYVQHLLVNGCGGA--FLHPTH 645 (985)
Q Consensus 602 RV~L~LSGHiHhY~R~~~~~~~------G-----~~~~~~~IVsGGGGA--fLhPTH 645 (985)
+|+++|+||.|.|+|..|.... | ...+|.+|+.|+||+ -+.|-.
T Consensus 332 ~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~ 388 (452)
T KOG1378|consen 332 KVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFS 388 (452)
T ss_pred ceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCccc
Confidence 9999999999999999887521 2 245789999999995 444444
No 6
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=6.2e-18 Score=180.15 Aligned_cols=224 Identities=20% Similarity=0.215 Sum_probs=154.7
Q ss_pred CCCCceEEEEEeccC-CCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcC
Q 001992 377 SEKEDLWFDFMADTG-DGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQ 455 (985)
Q Consensus 377 ~~d~~lwFd~VADtG-DG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~ 455 (985)
.+++.+.|-+|||.| .|.-.|-+||..|+.=..+ ...|||+-.||+.|-+|-...+..||..-|+..+.
T Consensus 39 ~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~----------l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT 108 (336)
T KOG2679|consen 39 KSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEK----------LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYT 108 (336)
T ss_pred CCCCceEEEEEcccccCCchhHHHHHHHHHhHHHh----------ccceEEEecCCcccccCCCCCCChhHHhhhhhccc
Confidence 357899999999999 6777788888888754322 34599999999999999999999999999988775
Q ss_pred CCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEEE
Q 001992 456 PPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWV 535 (985)
Q Consensus 456 ~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWL 535 (985)
. |. |+ .| +|.|.||||+..+.++++.-...+. -..|.-| +|||..- .. .=+
T Consensus 109 ~-------------pS-------LQ---kp-Wy~vlGNHDyrGnV~AQls~~l~~~-d~RW~c~--rsf~~~a-e~-ve~ 159 (336)
T KOG2679|consen 109 A-------------PS-------LQ---KP-WYSVLGNHDYRGNVEAQLSPVLRKI-DKRWICP--RSFYVDA-EI-VEM 159 (336)
T ss_pred C-------------cc-------cc---cc-hhhhccCccccCchhhhhhHHHHhh-ccceecc--cHHhhcc-ee-eee
Confidence 4 23 23 35 9999999999999999887433221 1123322 4553322 11 123
Q ss_pred EEEecCCC---------CC------------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHH
Q 001992 536 FGLDLALH---------CD------------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHL 594 (985)
Q Consensus 536 lGLDsql~---------gd------------ID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~l 594 (985)
++.|+..- .+ +-+.|..||+..+++ ...+|+||+.|||.|+.+.++. + +-++..
T Consensus 160 f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~--S~a~wkiVvGHh~i~S~~~HG~--T-~eL~~~ 234 (336)
T KOG2679|consen 160 FFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA--SRAKWKIVVGHHPIKSAGHHGP--T-KELEKQ 234 (336)
T ss_pred eccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHH--hhcceEEEecccceehhhccCC--h-HHHHHH
Confidence 33333211 11 113577788887764 4569999999999999987652 1 223344
Q ss_pred HHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcCcccccCCC
Q 001992 595 ICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSN 649 (985)
Q Consensus 595 le~~L-~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGAfLhPTH~~~~ 649 (985)
+.++| ..+|+++++||.|.-|...-. +++.+++|||||---=..|+..|+
T Consensus 235 LlPiL~~n~VdlY~nGHDHcLQhis~~-----e~~iqf~tSGagSkaw~g~~~~~~ 285 (336)
T KOG2679|consen 235 LLPILEANGVDLYINGHDHCLQHISSP-----ESGIQFVTSGAGSKAWRGTDHNPE 285 (336)
T ss_pred HHHHHHhcCCcEEEecchhhhhhccCC-----CCCeeEEeeCCcccccCCCccCCc
Confidence 44444 469999999999998887633 245699999987655555566664
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.71 E-value=2.3e-16 Score=165.70 Aligned_cols=178 Identities=20% Similarity=0.242 Sum_probs=110.2
Q ss_pred CCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001992 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL 500 (985)
|.+|+|+++||++..+...+ +..+.++.+...++. + . .+.+++.||||||..+..
T Consensus 48 ~~pd~ii~~GDl~~~~~~~~-~~~~~~~~~~~~~~~----------------------~-~-~~vp~~~i~GNHD~~~~~ 102 (262)
T cd07395 48 PKPKFVVVCGDLVNAMPGDE-LRERQVSDLKDVLSL----------------------L-D-PDIPLVCVCGNHDVGNTP 102 (262)
T ss_pred CCCCEEEEeCCcCCCCcchh-hHHHHHHHHHHHHhh----------------------c-c-CCCcEEEeCCCCCCCCCC
Confidence 56799999999998765532 322222334333321 0 0 124599999999985331
Q ss_pred -hHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCCC------CCCHHHHHHHHHHHHhhc-CCCCeEEEEe
Q 001992 501 -NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHC------DIDVYQFKFFAELVKEQV-GERDSVIIMT 572 (985)
Q Consensus 501 -~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~g------dID~~Q~~wF~~ll~~~v-~~~d~VIL~t 572 (985)
....+.|.+ . ....||++..++ +++++||++... .++..|++|+++.+++.- ..+.++||++
T Consensus 103 ~~~~~~~f~~-~--------~g~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~ 172 (262)
T cd07395 103 TEESIKDYRD-V--------FGDDYFSFWVGG-VFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQ 172 (262)
T ss_pred ChhHHHHHHH-H--------hCCcceEEEECC-EEEEEeccccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEE
Confidence 111121211 0 112478888865 899999997532 356789999999997422 2457999999
Q ss_pred cCCCCccccccccC---cchhhHHHHHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCc
Q 001992 573 HEPNWLLDWYFNNV---SGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF 640 (985)
Q Consensus 573 HeP~w~~~~~~~~~---~~~~l~~lle~~L-~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGAf 640 (985)
|+|.+..+....+. .....+..+.+++ +++|+++|+||+|.+.+.... | .+++++|+.|..
T Consensus 173 H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~~~---g----~~~~~~~~~~~~ 237 (262)
T cd07395 173 HIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGRYG---G----LEMVVTSAIGAQ 237 (262)
T ss_pred CcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceEEC---C----EEEEEcCceecc
Confidence 99998654322111 0111223444444 578999999999988764421 2 367888887763
No 8
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.67 E-value=1.2e-15 Score=156.86 Aligned_cols=170 Identities=20% Similarity=0.310 Sum_probs=108.0
Q ss_pred CCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001992 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL 500 (985)
+++|++|++||++.. ++.++|+ ++.+-+ ++...| ++.||||||..+.
T Consensus 39 ~~~d~vi~~GDl~~~-~~~~~~~-~~~~~l-----------------------------~~~~~p-~~~v~GNHD~~~~- 85 (240)
T cd07402 39 PRPDLVLVTGDLTDD-GSPESYE-RLRELL-----------------------------AALPIP-VYLLPGNHDDRAA- 85 (240)
T ss_pred CCCCEEEECccCCCC-CCHHHHH-HHHHHH-----------------------------hhcCCC-EEEeCCCCCCHHH-
Confidence 567999999999975 3334443 221211 112334 9999999998543
Q ss_pred hHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC----CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 501 NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH----CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 501 ~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~----gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
+.++|-.... .....+|+++.+. +.+++||+... +.++..|++|+++.+++ . ++.++|+++|+|+
T Consensus 86 --~~~~~~~~~~------~~~~~~~~~~~~~-~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~-~-~~~~~il~~H~pp 154 (240)
T cd07402 86 --MRAVFPELPP------APGFVQYVVDLGG-WRLILLDSSVPGQHGGELCAAQLDWLEAALAE-A-PDKPTLVFLHHPP 154 (240)
T ss_pred --HHHhhccccc------cccccceeEecCC-EEEEEEeCCCCCCcCCEECHHHHHHHHHHHHh-C-CCCCEEEEECCCC
Confidence 3344422111 1223467888874 89999998753 44678999999999974 2 3689999999999
Q ss_pred CccccccccCcchhhHHHHHhhh-CC-ceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCCcC
Q 001992 577 WLLDWYFNNVSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFL 641 (985)
Q Consensus 577 w~~~~~~~~~~~~~l~~lle~~L-~~-RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGAfL 641 (985)
+.......+.....-...+.+++ ++ +++++|+||+|.++..... +.+++++|+.|.-.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~-------g~~~~~~gs~~~~~ 214 (240)
T cd07402 155 FPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGSWG-------GIPLLTAPSTCHQF 214 (240)
T ss_pred ccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeEEC-------CEEEEEcCcceeee
Confidence 76532111111001123344444 45 8999999999987665531 23778888866533
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.66 E-value=2.2e-15 Score=160.11 Aligned_cols=137 Identities=18% Similarity=0.114 Sum_probs=88.9
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCC----------------------
Q 001992 485 PQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL---------------------- 542 (985)
Q Consensus 485 P~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql---------------------- 542 (985)
.+++.+|||||+++....... . . ........||+++.. +|.+++||+..
T Consensus 74 ~p~~~v~GNHD~~~~~~~~~~---~-~----~~~~~~~~yysf~~~-~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~ 144 (267)
T cd07396 74 GPVHHVLGNHDLYNPSREYLL---L-Y----TLLGLGAPYYSFSPG-GIRFIVLDGYDISALGRPEDTPKAENADDNSNL 144 (267)
T ss_pred CCEEEecCccccccccHhhhh---c-c----cccCCCCceEEEecC-CcEEEEEeCCccccccCCCCChhhhhHHHhchh
Confidence 349999999999765332111 0 0 111233458999876 69999999953
Q ss_pred ------------CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhh-C-CceeEEEc
Q 001992 543 ------------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-K-GRCKLRIA 608 (985)
Q Consensus 543 ------------~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L-~-~RV~L~LS 608 (985)
.+.++..|++|+++.+++....+.++||++|||.+..... ......+- ..+.+++ + .+|+++|+
T Consensus 145 ~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~-~~~~~~~~-~~~~~ll~~~~~V~~v~~ 222 (267)
T cd07396 145 GLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTS-PHGLLWNH-EEVLSILRAYGCVKACIS 222 (267)
T ss_pred hhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCC-ccccccCH-HHHHHHHHhCCCEEEEEc
Confidence 3467889999999999754345678999999999865531 11111111 2233334 3 47999999
Q ss_pred CccCCCcceeecCCCCCcccceEEEecCCCC
Q 001992 609 GDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (985)
Q Consensus 609 GHiHhY~R~~~~~~~G~~~~~~~IVsGGGGA 639 (985)
||+|.++... . .+.+++++|+=.-
T Consensus 223 GH~H~~~~~~-~------~gi~~~~~~a~~~ 246 (267)
T cd07396 223 GHDHEGGYAQ-R------HGIHFLTLEGMVE 246 (267)
T ss_pred CCcCCCCccc-c------CCeeEEEechhhc
Confidence 9999887443 1 1336788776443
No 10
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.60 E-value=2e-14 Score=153.17 Aligned_cols=199 Identities=20% Similarity=0.293 Sum_probs=112.9
Q ss_pred CCCceEEEEEeccC---CC------CCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhcccc
Q 001992 378 EKEDLWFDFMADTG---DG------GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFR 448 (985)
Q Consensus 378 ~d~~lwFd~VADtG---DG------~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~ 448 (985)
+++++.|..++|+= +. .+...+..+++++-. ...+.+|+||++||++- .++.++|+. +.+
T Consensus 11 ~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~---------~~~~~~D~vvitGDl~~-~~~~~~~~~-~~~ 79 (275)
T PRK11148 11 GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIR---------AQQHEFDLIVATGDLAQ-DHSSEAYQH-FAE 79 (275)
T ss_pred CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHH---------hhCCCCCEEEECCCCCC-CCCHHHHHH-HHH
Confidence 35779999999993 22 122222333333211 01245799999999987 455555543 222
Q ss_pred chhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEE
Q 001992 449 PFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQ 528 (985)
Q Consensus 449 PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlr 528 (985)
.+ ++++.| +|.||||||.+.. +.+++... ++. ..|+.+.
T Consensus 80 ~l-----------------------------~~l~~P-v~~v~GNHD~~~~---~~~~~~~~----~~~----~~~~~~~ 118 (275)
T PRK11148 80 GI-----------------------------APLRKP-CVWLPGNHDFQPA---MYSALQDA----GIS----PAKHVLI 118 (275)
T ss_pred HH-----------------------------hhcCCc-EEEeCCCCCChHH---HHHHHhhc----CCC----ccceEEe
Confidence 22 122334 9999999998654 33333221 121 1233333
Q ss_pred CCCcEEEEEEecCC----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccC-cchhhHHHHHhhh-CC-
Q 001992 529 LPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KG- 601 (985)
Q Consensus 529 LP~~wWLlGLDsql----~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~-~~~~l~~lle~~L-~~- 601 (985)
..+|++++||+.. .+.++..|++|+++.+++ . +++++||+.|||+...+..+.++ .-.+- ..+.+++ ++
T Consensus 119 -~~~~~~i~Lds~~~g~~~G~l~~~ql~wL~~~L~~-~-~~~~~vv~~hH~P~~~~~~~~d~~~l~n~-~~l~~ll~~~~ 194 (275)
T PRK11148 119 -GEHWQILLLDSQVFGVPHGELSEYQLEWLERKLAD-A-PERHTLVLLHHHPLPAGCAWLDQHSLRNA-HELAEVLAKFP 194 (275)
T ss_pred -cCCEEEEEecCCCCCCcCCEeCHHHHHHHHHHHhh-C-CCCCeEEEEcCCCCCCCcchhhccCCCCH-HHHHHHHhcCC
Confidence 4459999999975 456789999999999974 3 34555565665443332211111 11111 2334444 44
Q ss_pred ceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCC
Q 001992 602 RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (985)
Q Consensus 602 RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGA 639 (985)
+|+++|+||+|....... .+..++++++.+.
T Consensus 195 ~v~~vl~GH~H~~~~~~~-------~gi~~~~~ps~~~ 225 (275)
T PRK11148 195 NVKAILCGHIHQELDLDW-------NGRRLLATPSTCV 225 (275)
T ss_pred CceEEEecccChHHhceE-------CCEEEEEcCCCcC
Confidence 799999999998544321 1235677666554
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.57 E-value=1.9e-14 Score=152.75 Aligned_cols=128 Identities=16% Similarity=0.140 Sum_probs=79.8
Q ss_pred CcEEEeCCCCCCCCCh--hHHHHHhhccccCCccccCCCcceEEEEC-CCcEEEEEEecCCC----------CCCCHHHH
Q 001992 485 PQCYIIPGNHDWFDGL--NTFMRFICHKSWLGGWFMPQKKSYFALQL-PKGWWVFGLDLALH----------CDIDVYQF 551 (985)
Q Consensus 485 P~ifAIPGNHDWyDGL--~aF~R~F~~r~~lgGW~mpQ~~SYFAlrL-P~~wWLlGLDsql~----------gdID~~Q~ 551 (985)
.+++.||||||.|+-. +.+.+++.+ + .++.++... ||.... -.++.++|||++.. +.+++.|+
T Consensus 77 ~p~~~v~GNHD~~~~~~~~~~~~~~~~--y-~~~~~~~~~-~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql 152 (256)
T cd07401 77 EKWFDIRGNHDLFNIPSLDSENNYYRK--Y-SATGRDGSF-SFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLL 152 (256)
T ss_pred ceEEEeCCCCCcCCCCCccchhhHHHH--h-heecCCCcc-ceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHH
Confidence 3499999999997321 122222211 1 112222222 333322 23499999999742 56789999
Q ss_pred HHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeecC
Q 001992 552 KFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (985)
Q Consensus 552 ~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~~ 621 (985)
+|+++.+++ .++++++||++|+|.+....... .....+..+++ +++|+++|+||+|.+++..|..
T Consensus 153 ~wL~~~L~~-~~~~~~~IV~~HhP~~~~~~~~~-~~~~~~~~ll~---~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 153 DRLEKELEK-STNSNYTIWFGHYPTSTIISPSA-KSSSKFKDLLK---KYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHHHh-cccCCeEEEEEcccchhccCCCc-chhHHHHHHHH---hcCCcEEEeCCccCCCcceeee
Confidence 999998864 44567999999999865432111 11111222333 5689999999999999966664
No 12
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.49 E-value=2.7e-13 Score=140.45 Aligned_cols=126 Identities=18% Similarity=0.231 Sum_probs=83.0
Q ss_pred CccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChh
Q 001992 422 RGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN 501 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~ 501 (985)
++|+++++||++..+...++|..-. +-++. +++ .+.+++++|||||
T Consensus 35 ~~d~iv~~GDl~~~~~~~~~~~~~~-~~~~~--------------------------l~~-~~~p~~~~~GNHD------ 80 (214)
T cd07399 35 NIAFVLHLGDIVDDGDNDAEWEAAD-KAFAR--------------------------LDK-AGIPYSVLAGNHD------ 80 (214)
T ss_pred CCCEEEECCCccCCCCCHHHHHHHH-HHHHH--------------------------HHH-cCCcEEEECCCCc------
Confidence 4699999999998665444443211 11111 111 1234999999999
Q ss_pred HHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccc
Q 001992 502 TFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDW 581 (985)
Q Consensus 502 aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~ 581 (985)
.++++|+ .++..|++|+++++++ .++.++|+++|||.+..+.
T Consensus 81 --------------------------------~~~~ld~----~~~~~ql~WL~~~L~~--~~~~~~iv~~H~p~~~~~~ 122 (214)
T cd07399 81 --------------------------------LVLALEF----GPRDEVLQWANEVLKK--HPDRPAILTTHAYLNCDDS 122 (214)
T ss_pred --------------------------------chhhCCC----CCCHHHHHHHHHHHHH--CCCCCEEEEecccccCCCC
Confidence 1344443 3568999999999974 4467999999999996653
Q ss_pred ccccCc----chhhHHHHHhhh-CC-ceeEEEcCccCCCcceee
Q 001992 582 YFNNVS----GKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSY 619 (985)
Q Consensus 582 ~~~~~~----~~~l~~lle~~L-~~-RV~L~LSGHiHhY~R~~~ 619 (985)
..+... ..+-...+++++ ++ +|+++|+||+|.+.+-..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 123 RPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred cCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 322110 112234566666 44 799999999999877654
No 13
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.47 E-value=2.8e-13 Score=145.14 Aligned_cols=166 Identities=20% Similarity=0.231 Sum_probs=102.2
Q ss_pred CCccEEEEcccccCCCCChhhhh-------hccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCC
Q 001992 421 PRGDVLLIGGDLAYPNPSAFTYE-------RRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGN 493 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~e~Y~-------~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGN 493 (985)
+.+|++|++||++......+..+ ..+++.++..+ +..++++++||
T Consensus 67 ~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~----------------------------~~~pv~~~~GN 118 (296)
T cd00842 67 PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAF----------------------------PDTPVYPALGN 118 (296)
T ss_pred CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhC----------------------------CCCCEEEcCCC
Confidence 56799999999999875432221 22222232211 23459999999
Q ss_pred CCCCCC--------hhHHHHHhhcccc---C--CccccCCCcceEEEECCCcEEEEEEecCCC-----------CCCCHH
Q 001992 494 HDWFDG--------LNTFMRFICHKSW---L--GGWFMPQKKSYFALQLPKGWWVFGLDLALH-----------CDIDVY 549 (985)
Q Consensus 494 HDWyDG--------L~aF~R~F~~r~~---l--gGW~mpQ~~SYFAlrLP~~wWLlGLDsql~-----------gdID~~ 549 (985)
||.+.. .+.+...+ ...| + .+..+-.+..||+..+..++++++|||+.. ......
T Consensus 119 HD~~p~~~~~~~~~~~~~~~~~-~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~ 197 (296)
T cd00842 119 HDSYPVNQFPPNNSPSWLYDAL-AELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAG 197 (296)
T ss_pred CCCCcccccCCcccccHHHHHH-HHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHH
Confidence 998743 11111111 1111 1 011122356799999777799999999742 123368
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001992 550 QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (985)
Q Consensus 550 Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R 616 (985)
|++||+++|++..+.+.+|||++|+|.............+.+..+++++ +..|...|+||+|..+-
T Consensus 198 Ql~WL~~~L~~a~~~~~~v~I~~HiPp~~~~~~~~~~~~~~~~~ii~~y-~~~i~~~~~GH~H~d~~ 263 (296)
T cd00842 198 QLQWLEDELQEAEQAGEKVWIIGHIPPGVNSYDTLENWSERYLQIINRY-SDTIAGQFFGHTHRDEF 263 (296)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeccCCCCcccccchHHHHHHHHHHHHH-HHhhheeeecccccceE
Confidence 9999999998644566899999999997764321001123344555554 33478999999996543
No 14
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=7.9e-14 Score=126.39 Aligned_cols=193 Identities=16% Similarity=0.184 Sum_probs=95.7
Q ss_pred eEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCc
Q 001992 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 461 (985)
Q Consensus 382 lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~ 461 (985)
+.|.+++|+.-+............+.. ..+++|++|++||+++.+...+.....+. .....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~----------~~~~~d~ii~~GD~~~~~~~~~~~~~~~~-~~~~~-------- 61 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIA----------AENKPDFIIFLGDLVDGGNPSEEWRAQFW-FFIRL-------- 61 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHH----------HHTTTSEEEEESTSSSSSSHHHHHHHHHH-HHHHH--------
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHh----------ccCCCCEEEeeccccccccccccchhhhc-cchhh--------
Confidence 468899999655443321122221111 12466999999999998876554444331 01100
Q ss_pred ccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhc-ccc--CC-ccccCCCcceEEEECCCcEEEEE
Q 001992 462 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICH-KSW--LG-GWFMPQKKSYFALQLPKGWWVFG 537 (985)
Q Consensus 462 ~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~-r~~--lg-GW~mpQ~~SYFAlrLP~~wWLlG 537 (985)
.. ...+++.|+||||++............ ... .. ++...++. ......... +...
T Consensus 62 ------------------~~-~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 120 (200)
T PF00149_consen 62 ------------------LN-PKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNN-KVIFDNDNF-WFNS 120 (200)
T ss_dssp ------------------HH-TTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESS-EEEEEETTE-EEEE
T ss_pred ------------------hh-ccccccccccccccceeccccccccccccccccccccccccCcc-eeeeccccc-cccc
Confidence 01 234599999999998654332222111 110 00 01111111 012222221 2222
Q ss_pred EecCCCCCCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccC-cchhhHHHHHhhh-CCceeEEEcCccCCC
Q 001992 538 LDLALHCDID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KGRCKLRIAGDMHHY 614 (985)
Q Consensus 538 LDsql~gdID-~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~-~~~~l~~lle~~L-~~RV~L~LSGHiHhY 614 (985)
.+........ ..|..|..........+.+++||++|+|.+......... ........++.++ +++|+++++||+|.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 121 GNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccccchhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2221111122 233333333333334557899999999999886543210 0122223444444 679999999999986
No 15
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.40 E-value=2.8e-12 Score=134.17 Aligned_cols=134 Identities=13% Similarity=0.068 Sum_probs=78.9
Q ss_pred CCcEEEeCCCCCCCC-ChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC-----------------CC
Q 001992 484 GPQCYIIPGNHDWFD-GLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----------------CD 545 (985)
Q Consensus 484 gP~ifAIPGNHDWyD-GL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~-----------------gd 545 (985)
+| +|+||||||+|. +.+.+.+.+.. .++....+ .++.++. +.|+|++.... +.
T Consensus 72 ~~-v~~V~GNHD~~~~~~~~~~~~l~~----~~~~~~~n---~~~~~~~-i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 72 GT-KVLLKGNHDYWWGSASKLRKALEE----SRLALLFN---NAYIDDD-VAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred CC-eEEEeCCccccCCCHHHHHHHHHh----cCeEEecc---CcEEECC-EEEEEEEeeCCCCCccccccccccchhHHH
Confidence 45 899999999864 44444443322 12322212 2344554 89999874211 11
Q ss_pred CCHHHHHHHHHHHHhhcCC--CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeecCCC
Q 001992 546 IDVYQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSD 623 (985)
Q Consensus 546 ID~~Q~~wF~~ll~~~v~~--~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~~~~ 623 (985)
+...|.+|+++.+++..+. +.++|+++|+|.+..+. ....+...+++ .+++++++||+|++++..|-.+.
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~-----~~~~~~~~~~~---~~v~~vl~GH~H~~~~~~~~~~~ 214 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG-----DDSPISKLIEE---YGVDICVYGHLHGVGRDRAINGE 214 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC-----CHHHHHHHHHH---cCCCEEEECCCCCCcccccccce
Confidence 1246899999988642222 24699999999876542 11222233333 47999999999999886654321
Q ss_pred CCcccceEEEecC
Q 001992 624 GPVYVQHLLVNGC 636 (985)
Q Consensus 624 G~~~~~~~IVsGG 636 (985)
..+.+|.++..
T Consensus 215 --~~gi~~~~~~~ 225 (232)
T cd07393 215 --RGGIRYQLVSA 225 (232)
T ss_pred --ECCEEEEEEcc
Confidence 12335566544
No 16
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.28 E-value=7.7e-11 Score=122.53 Aligned_cols=178 Identities=23% Similarity=0.341 Sum_probs=106.2
Q ss_pred EEEEEecc--CC-CCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhc--cccchhhhcCCC
Q 001992 383 WFDFMADT--GD-GGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERR--LFRPFEYALQPP 457 (985)
Q Consensus 383 wFd~VADt--GD-G~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~R--f~~PYe~Al~~~ 457 (985)
.|..++|+ |. +.+++-.++.++++=. .+++|+||+.||++-. +..++|+.. +.+ ..
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~-----------~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~----~~--- 62 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIE-----------QLKPDLLVVTGDLTND-GEPEEYRRLKELLA----RL--- 62 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHh-----------cCCCCEEEEccCcCCC-CCHHHHHHHHHHHh----hc---
Confidence 46678888 32 4444444444444311 2456999999999987 666666543 222 00
Q ss_pred CCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECC-CcEEEE
Q 001992 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLP-KGWWVF 536 (985)
Q Consensus 458 ~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP-~~wWLl 536 (985)
..+.| ++.+|||||-+..-...........+ .+...... .+|+++
T Consensus 63 -----------------------~~~~~-~~~vpGNHD~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 108 (301)
T COG1409 63 -----------------------ELPAP-VIVVPGNHDARVVNGEAFSDQFFNRY----------AVLVGACSSGGWRVI 108 (301)
T ss_pred -----------------------cCCCc-eEeeCCCCcCCchHHHHhhhhhcccC----------cceEeeccCCceEEE
Confidence 11234 99999999987764433332221110 11111111 469999
Q ss_pred EEecCC----CCCCCHHHHHHHHHHHHhhcCCC--CeEEEEecCCCCccccccccCcchhhHHHHHhhhCCc--eeEEEc
Q 001992 537 GLDLAL----HCDIDVYQFKFFAELVKEQVGER--DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGR--CKLRIA 608 (985)
Q Consensus 537 GLDsql----~gdID~~Q~~wF~~ll~~~v~~~--d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~R--V~L~LS 608 (985)
++|+.. .|.++..|++|+++.+++ .... +.+|++.|||........+...-.............. |+++|+
T Consensus 109 ~~d~~~~~~~~G~~~~~q~~~l~~~l~~-~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~ 187 (301)
T COG1409 109 GLDSSVPGVPLGRLGAEQLDWLEEALAA-APERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLS 187 (301)
T ss_pred EecCCCCCCCCCEECHHHHHHHHHHHHh-CccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEe
Confidence 999975 367889999999999874 2222 3788889999887765443222111112222222233 999999
Q ss_pred CccCCC
Q 001992 609 GDMHHY 614 (985)
Q Consensus 609 GHiHhY 614 (985)
||+|--
T Consensus 188 GH~H~~ 193 (301)
T COG1409 188 GHIHLA 193 (301)
T ss_pred Cccccc
Confidence 999943
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.24 E-value=7.6e-11 Score=126.40 Aligned_cols=120 Identities=17% Similarity=0.113 Sum_probs=77.3
Q ss_pred CcEEEeCCCCCCCCC-------hhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCCC-----CCCCHHHHH
Q 001992 485 PQCYIIPGNHDWFDG-------LNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----CDIDVYQFK 552 (985)
Q Consensus 485 P~ifAIPGNHDWyDG-------L~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~-----gdID~~Q~~ 552 (985)
.+++.+|||||..-+ ...|.++|. ..++++..++ |.+++||+... +.+...|.+
T Consensus 85 ~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg-------------~~~~~~~~~~-~~fV~Lds~~l~~~~~~~~~~~~~~ 150 (257)
T cd08163 85 KMVESLPGNHDIGFGNGVVLPVRQRFEKYFG-------------PTSRVIDVGN-HTFVILDTISLSNKDDPDVYQPPRE 150 (257)
T ss_pred ceEEEeCCCcccCCCCCCCHHHHHHHHHHhC-------------CCceEEEECC-EEEEEEccccccCCcccccchhHHH
Confidence 359999999997322 223333332 1246788775 89999999742 235568999
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCCcccccccc---C-----------cch-hhHHHH-Hhhh-CCceeEEEcCccCCCc
Q 001992 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN---V-----------SGK-NVKHLI-CDYL-KGRCKLRIAGDMHHYM 615 (985)
Q Consensus 553 wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~---~-----------~~~-~l~~ll-e~~L-~~RV~L~LSGHiHhY~ 615 (985)
|+++.++ ..+++.++||++|+|.|-...-.-. + ..+ .+.... +++| .-+.+++||||+|+|=
T Consensus 151 ~l~~~l~-~~~~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C 229 (257)
T cd08163 151 FLHSFSA-MKVKSKPRILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYC 229 (257)
T ss_pred HHHhhhh-ccCCCCcEEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccc
Confidence 9999875 3456789999999999977432100 0 011 222222 2222 3488999999999986
Q ss_pred ceee
Q 001992 616 RHSY 619 (985)
Q Consensus 616 R~~~ 619 (985)
.+.-
T Consensus 230 ~~~h 233 (257)
T cd08163 230 EVVH 233 (257)
T ss_pred eeEc
Confidence 6653
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.19 E-value=1.5e-10 Score=117.78 Aligned_cols=77 Identities=19% Similarity=0.061 Sum_probs=50.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhc---CCCCeEEEEecCCCCccccccc----------c-Cc-chhhHHHHHhhh-CCceeE
Q 001992 542 LHCDIDVYQFKFFAELVKEQV---GERDSVIIMTHEPNWLLDWYFN----------N-VS-GKNVKHLICDYL-KGRCKL 605 (985)
Q Consensus 542 l~gdID~~Q~~wF~~ll~~~v---~~~d~VIL~tHeP~w~~~~~~~----------~-~~-~~~l~~lle~~L-~~RV~L 605 (985)
..+.++..|.+||++.+++.. ....+.+++.|+|......... + .. ..+-..+++.+. ..+|++
T Consensus 88 ~~g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~ 167 (199)
T cd07383 88 GYDWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKG 167 (199)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEE
Confidence 456788999999999986421 3457999999999876533211 1 00 112223444443 468999
Q ss_pred EEcCccCCCccee
Q 001992 606 RIAGDMHHYMRHS 618 (985)
Q Consensus 606 ~LSGHiHhY~R~~ 618 (985)
+++||+|.++...
T Consensus 168 v~~GH~H~~~~~~ 180 (199)
T cd07383 168 VFCGHDHGNDFCG 180 (199)
T ss_pred EEeCCCCCcceec
Confidence 9999999876543
No 19
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.18 E-value=2.4e-10 Score=112.45 Aligned_cols=111 Identities=17% Similarity=0.223 Sum_probs=66.3
Q ss_pred cEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEEecCC------CCCCCHHHHHHHHHHHH
Q 001992 486 QCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL------HCDIDVYQFKFFAELVK 559 (985)
Q Consensus 486 ~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql------~gdID~~Q~~wF~~ll~ 559 (985)
++++||||||...- .... . .++.....+ .+.++ +|.++|+|+.. .+..+..|.+|+ +.+.
T Consensus 54 p~~~v~GNHD~~~~----~~~~-~----~~~~~~~~~---~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 54 PVLAVPGNCDTPEI----LGLL-T----SAGLNLHGK---VVEVG-GYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CEEEEcCCCCCHHH----HHhh-h----cCcEecCCC---EEEEC-CEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 49999999996322 1111 0 112222221 23455 49999998742 234567889888 3332
Q ss_pred hhcCCCCeEEEEecCCCCcc--cccccc--CcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 560 EQVGERDSVIIMTHEPNWLL--DWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 560 ~~v~~~d~VIL~tHeP~w~~--~~~~~~--~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
..+++.+|+++|+|++.. +..... .....+..++++ .+++++|+||+|.-.
T Consensus 120 --~~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~---~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 --NLLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEE---RQPLLCICGHIHESR 174 (188)
T ss_pred --ccCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHH---hCCcEEEEecccccc
Confidence 245689999999999752 211111 122334455554 488999999999743
No 20
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.13 E-value=1.3e-09 Score=117.12 Aligned_cols=196 Identities=14% Similarity=0.123 Sum_probs=105.4
Q ss_pred CCceEEEEEeccCCCCC-CchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCC
Q 001992 379 KEDLWFDFMADTGDGGN-SSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP 457 (985)
Q Consensus 379 d~~lwFd~VADtGDG~d-StYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~ 457 (985)
.+++.+.+++|+-.|.. +.-...+++.+-. ..++|+|+++||++.... .++.+ .+ ...+.
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~-----------~~~pDlVli~GD~~d~~~-~~~~~-~~----~~~L~-- 107 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGI-----------EQKPDLILLGGDYVLFDM-PLNFS-AF----SDVLS-- 107 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHH-----------hcCCCEEEEccCcCCCCc-cccHH-HH----HHHHH--
Confidence 35699999999965532 2222333332211 235699999999775221 11111 11 11111
Q ss_pred CCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChh---HHHHHhhccccCCccccCCCcceEEEECCC-cE
Q 001992 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN---TFMRFICHKSWLGGWFMPQKKSYFALQLPK-GW 533 (985)
Q Consensus 458 ~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~---aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~-~w 533 (985)
+++. ..| +|+++||||++.+.. .+.+.+. -.|+..-++.+. .++.+. ..
T Consensus 108 --------------------~L~~-~~p-v~~V~GNHD~~~~~~~~~~~~~~l~----~~gi~lL~n~~~-~i~~~~~~i 160 (271)
T PRK11340 108 --------------------PLAE-CAP-TFACFGNHDRPVGTEKNHLIGETLK----SAGITVLFNQAT-VIATPNRQF 160 (271)
T ss_pred --------------------HHhh-cCC-EEEecCCCCcccCccchHHHHHHHH----hcCcEEeeCCeE-EEeeCCcEE
Confidence 1111 234 999999999875432 2222221 235555555443 455443 37
Q ss_pred EEEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCC
Q 001992 534 WVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (985)
Q Consensus 534 WLlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHh 613 (985)
+|+|+|+-..+..+.. +..++++..|+++|+|...... -..+++|.||||+|.
T Consensus 161 ~i~G~~d~~~~~~~~~----------~~~~~~~~~IlL~H~P~~~~~~-----------------~~~~~dL~lsGHTHG 213 (271)
T PRK11340 161 ELVGTGDLWAGQCKPP----------PASEANLPRLVLAHNPDSKEVM-----------------RDEPWDLMLCGHTHG 213 (271)
T ss_pred EEEEecchhccCCChh----------HhcCCCCCeEEEEcCCChhHhh-----------------ccCCCCEEEeccccC
Confidence 8999986433222211 1123467899999999864321 134799999999996
Q ss_pred Cccee--------ec----CCCCC--cccceEEEecCCCCcCcccccCC
Q 001992 614 YMRHS--------YV----PSDGP--VYVQHLLVNGCGGAFLHPTHVFS 648 (985)
Q Consensus 614 Y~R~~--------~~----~~~G~--~~~~~~IVsGGGGAfLhPTH~~~ 648 (985)
=|-.- +. ...|- ....+++||-|-|.. .|.|...
T Consensus 214 GQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l~Vs~G~G~~-~p~R~~~ 261 (271)
T PRK11340 214 GQLRVPLVGEPFAPVEDKRYVAGLNAFGERQIYTTRGVGSL-YGLRLNC 261 (271)
T ss_pred CeEEccccCccccccccCcccCCcEEeCCcEEEEeCCccCC-cCCcccC
Confidence 33221 11 11232 123456666666654 4766543
No 21
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.07 E-value=2.6e-09 Score=109.01 Aligned_cols=198 Identities=19% Similarity=0.194 Sum_probs=109.2
Q ss_pred ceEEEEEeccCCCCCCc-hHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCC
Q 001992 381 DLWFDFMADTGDGGNSS-YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW 459 (985)
Q Consensus 381 ~lwFd~VADtGDG~dSt-YaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~ 459 (985)
++.+.+++|+-.+.... ....+++.+-. ..++|+++++||++......+ ..+.+.+..
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~-----------~~~~d~vl~~GD~~~~~~~~~---~~~~~~l~~------- 59 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKIN-----------ALKPDLVVLTGDLVDGSVDVL---ELLLELLKK------- 59 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHh-----------ccCCCEEEEcCcccCCcchhh---HHHHHHHhc-------
Confidence 35788999996543322 23344333211 123589999999988654332 122121211
Q ss_pred CcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCC-cEEEEEE
Q 001992 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPK-GWWVFGL 538 (985)
Q Consensus 460 ~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~-~wWLlGL 538 (985)
++ ...++++++||||++.+.....+....+ .|+..-.+. +..++... ...+.|+
T Consensus 60 -------------------l~--~~~~v~~v~GNHD~~~~~~~~~~~~l~~---~~v~~L~~~-~~~~~~~~~~i~i~G~ 114 (223)
T cd07385 60 -------------------LK--APLGVYAVLGNHDYYSGDEENWIEALES---AGITVLRNE-SVEISVGGATIGIAGV 114 (223)
T ss_pred -------------------cC--CCCCEEEECCCcccccCchHHHHHHHHH---cCCEEeecC-cEEeccCCeEEEEEec
Confidence 11 1234999999999987755431212211 234333332 23454433 2567776
Q ss_pred ecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001992 539 DLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (985)
Q Consensus 539 Dsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~ 618 (985)
+.... +.+.+.+.++ ..++++..|+++|.|...... -..++++++|||+|..|...
T Consensus 115 ~~~~~------~~~~~~~~~~-~~~~~~~~I~l~H~P~~~~~~-----------------~~~~~dl~l~GHtHggqi~~ 170 (223)
T cd07385 115 DDGLG------RRPDLEKALK-GLDEDDPNILLAHQPDTAEEA-----------------AAWGVDLQLSGHTHGGQIRL 170 (223)
T ss_pred cCccc------cCCCHHHHHh-CCCCCCCEEEEecCCChhHHh-----------------cccCccEEEeccCCCCEEec
Confidence 53321 1233444443 356678999999999854321 13589999999999776554
Q ss_pred ecC------------CCCC--cccceEEEecCCCCcCcccccCC
Q 001992 619 YVP------------SDGP--VYVQHLLVNGCGGAFLHPTHVFS 648 (985)
Q Consensus 619 ~~~------------~~G~--~~~~~~IVsGGGGAfLhPTH~~~ 648 (985)
+.. .+|- ....+++||-|-|...-|.|...
T Consensus 171 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~G~G~~~~~~R~~~ 214 (223)
T cd07385 171 PGIGPLVLSKLARPYDYGLYRKGGSQLYVSRGLGTWGPPLRLGC 214 (223)
T ss_pred cccccccchhhcCcccceEEEECCEEEEEcCCccCCCCchhcCC
Confidence 332 1111 11236677777777666666544
No 22
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.03 E-value=1.2e-08 Score=117.84 Aligned_cols=125 Identities=11% Similarity=0.151 Sum_probs=83.4
Q ss_pred cceEEEE-CCCcEEEEEEecCC-----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccc-----Ccchh
Q 001992 522 KSYFALQ-LPKGWWVFGLDLAL-----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN-----VSGKN 590 (985)
Q Consensus 522 ~SYFAlr-LP~~wWLlGLDsql-----~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~-----~~~~~ 590 (985)
..||+++ .++ |.+|+||++. .+.++..|++||++.|++ .++++|||++|||.|..+.-..+ ....+
T Consensus 291 ~~YYSFd~~gg-vrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~--a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n 367 (496)
T TIGR03767 291 TGYYTFDIAGG-VRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA--SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRHL 367 (496)
T ss_pred CceEEEEeECC-EEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc--CCCCCEEEEECCCCccccccccccccccccccC
Confidence 4699999 565 9999999975 367899999999999974 45678999999999876432111 11111
Q ss_pred hHHHHHhhh-CC-ceeEEEcCccCCCc-c-eeecCCCCCcccceEEEecCCCCcCcccccCCCc
Q 001992 591 VKHLICDYL-KG-RCKLRIAGDMHHYM-R-HSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNF 650 (985)
Q Consensus 591 l~~lle~~L-~~-RV~L~LSGHiHhY~-R-~~~~~~~G~~~~~~~IVsGGGGAfLhPTH~~~~~ 650 (985)
- ..+.++| ++ +|.++|+||+|.-. - +.+.++.+++.+-.-|++++-=-|-||-++++-.
T Consensus 368 ~-~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvdfPq~~Ri~Ei~ 430 (496)
T TIGR03767 368 G-TELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHIDFPQQGRIIELA 430 (496)
T ss_pred H-HHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccccCCCCceEEEEE
Confidence 2 2333334 54 79999999999432 2 2222222233333457877777788887776654
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.99 E-value=2.6e-09 Score=111.93 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccc-------cccc----CcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 547 DVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDW-------YFNN----VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 547 D~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~-------~~~~----~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
.+.|++|+++.+++ .+++++||+||||+-.... .++. .....+..++++ ++++++++||+|.-.
T Consensus 148 ~~~~l~~l~~~l~~--~~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~---~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 148 TAIVLKQLKKQLNQ--LDNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVK---YEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHHh--cCCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHH---hCCCEEEECCccCCC
Confidence 35789999998864 3457899999998743210 0110 011334445554 489999999999743
No 24
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.91 E-value=3.3e-08 Score=104.70 Aligned_cols=174 Identities=13% Similarity=0.144 Sum_probs=100.6
Q ss_pred eEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCc
Q 001992 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 461 (985)
Q Consensus 382 lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~ 461 (985)
.-+..++|+=+ ..-++.++++... ..++|++|++||++..++..++|..-+ +..
T Consensus 5 ~kIl~iSDiHg---n~~~le~l~~~~~-----------~~~~D~vv~~GDl~~~g~~~~~~~~~l-~~l----------- 58 (224)
T cd07388 5 RYVLATSNPKG---DLEALEKLVGLAP-----------ETGADAIVLIGNLLPKAAKSEDYAAFF-RIL----------- 58 (224)
T ss_pred eEEEEEEecCC---CHHHHHHHHHHHh-----------hcCCCEEEECCCCCCCCCCHHHHHHHH-HHH-----------
Confidence 45788999953 2223344433210 124699999999999876666664322 222
Q ss_pred ccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHH-Hhhcc-ccCCccccCCCcceEEEECCCcEEEEEEe
Q 001992 462 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMR-FICHK-SWLGGWFMPQKKSYFALQLPKGWWVFGLD 539 (985)
Q Consensus 462 ~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R-~F~~r-~~lgGW~mpQ~~SYFAlrLP~~wWLlGLD 539 (985)
++.. .++++||||||- .+..+++ .+-.. ..........+ + +++..+..|+|+|
T Consensus 59 ------------------~~l~-~pv~~V~GNhD~--~v~~~l~~~~~~~~~~p~~~~lh~~--~--~~~~g~~~~~GlG 113 (224)
T cd07388 59 ------------------GEAH-LPTFYVPGPQDA--PLWEYLREAYNAELVHPEIRNVHET--F--AFWRGPYLVAGVG 113 (224)
T ss_pred ------------------HhcC-CceEEEcCCCCh--HHHHHHHHHhcccccCccceecCCC--e--EEecCCeEEEEec
Confidence 1112 349999999994 2434433 22111 01122333332 2 4444447899998
Q ss_pred cCCCC--CCCHHHH----HHHHH----HHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcC
Q 001992 540 LALHC--DIDVYQF----KFFAE----LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAG 609 (985)
Q Consensus 540 sql~g--dID~~Q~----~wF~~----ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSG 609 (985)
-.... ..++.|. .|+.+ .+.+ . ...+.||++|+|++-.+..| .....++.+++++ +.++.++|
T Consensus 114 Gs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~-~-~~~~~VLv~H~PP~g~g~~h--~GS~alr~~I~~~---~P~l~i~G 186 (224)
T cd07388 114 GEIADEGEPEEHEALRYPAWVAEYRLKALWE-L-KDYRKVFLFHTPPYHKGLNE--QGSHEVAHLIKTH---NPLVVLVG 186 (224)
T ss_pred CCcCCCCCcCHHHHhhhhhhHHHHHHHHHHh-C-CCCCeEEEECCCCCCCCCCc--cCHHHHHHHHHHh---CCCEEEEc
Confidence 54422 3455552 34322 3322 2 45799999999999874322 3445677777775 89999999
Q ss_pred ccCC
Q 001992 610 DMHH 613 (985)
Q Consensus 610 HiHh 613 (985)
|+||
T Consensus 187 Hih~ 190 (224)
T cd07388 187 GKGQ 190 (224)
T ss_pred CCce
Confidence 9994
No 25
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.79 E-value=2.5e-08 Score=98.42 Aligned_cols=52 Identities=15% Similarity=0.118 Sum_probs=31.7
Q ss_pred CeEEEEecCCCCccccccccCcc-h--hhHHHHHhhh-CCceeEEEcCccCCCcce
Q 001992 566 DSVIIMTHEPNWLLDWYFNNVSG-K--NVKHLICDYL-KGRCKLRIAGDMHHYMRH 617 (985)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~~~-~--~l~~lle~~L-~~RV~L~LSGHiHhY~R~ 617 (985)
+++||++|||+...+....+..+ . .....+.+.+ +.+|+++++||+|.....
T Consensus 97 ~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 69999999999876432211110 1 1111233333 568999999999976433
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.72 E-value=3.8e-08 Score=94.44 Aligned_cols=49 Identities=12% Similarity=-0.023 Sum_probs=30.6
Q ss_pred EEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001992 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (985)
Q Consensus 569 IL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~ 618 (985)
|+++|||.+........... +.+.+++-+.+.+++++++||+|......
T Consensus 81 iv~~Hhp~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERLL-DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred EEEecCCCCCCCccccccCC-CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 89999999877532211111 22223333335699999999999866554
No 27
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.63 E-value=1.1e-07 Score=96.30 Aligned_cols=123 Identities=15% Similarity=0.089 Sum_probs=64.5
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhccccCCccccC----CCcceEEEEC-CCcEEEEEEecCCCCCCCHHHHHHHHHHHH
Q 001992 485 PQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMP----QKKSYFALQL-PKGWWVFGLDLALHCDIDVYQFKFFAELVK 559 (985)
Q Consensus 485 P~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mp----Q~~SYFAlrL-P~~wWLlGLDsql~gdID~~Q~~wF~~ll~ 559 (985)
.++++++||||.+.+........ ...++... .......... ..+..|+|++....... ..+.+..++..
T Consensus 77 ~~v~~~~GNHD~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~~-~~~~~~~~~~~- 150 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGALSPLL----ALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSRL-RDLLADAELRP- 150 (223)
T ss_pred CCEEEecCCCCCccccccccchH----hhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHHH-HHHHHHHHHHh-
Confidence 45999999999987754332211 11122210 1111122222 23477888875422211 12222223333
Q ss_pred hhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001992 560 EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (985)
Q Consensus 560 ~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~ 617 (985)
.+..+++..|+++|.|......... .. ....++.+...+++++++||+|..+..
T Consensus 151 ~~~~~~~~~Il~~H~~~~~~~~~~~---~~-~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 151 RPLDPDDFNILLLHGGVAGAGPSDS---ER-APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred hccCCCCcEEEEEeeeeecCCCCcc---cc-cccCcHhhcCcCCCEEECCCcccCeee
Confidence 2356678999999999754432110 00 111223333568999999999986543
No 28
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.62 E-value=1.7e-07 Score=84.74 Aligned_cols=50 Identities=22% Similarity=0.235 Sum_probs=33.6
Q ss_pred EEEecCCCCccccccccCcchhhHHHHHhhh-CCceeEEEcCccCCCcceee
Q 001992 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSY 619 (985)
Q Consensus 569 IL~tHeP~w~~~~~~~~~~~~~l~~lle~~L-~~RV~L~LSGHiHhY~R~~~ 619 (985)
|+++|.|.+......... .......+.+.+ ..++++.++||+|.++++..
T Consensus 70 i~~~H~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 70 ILLTHGPPYDPLDELSPD-EDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred EEEeccCCCCCchhhccc-chhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 999999999886543221 111122333333 56899999999999988863
No 29
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=98.59 E-value=6.7e-07 Score=103.13 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=56.6
Q ss_pred eEEEECCCcE--EEEEEecCC-----------CCCCCHHHHHHHHHHHHhhcC-CCCeEEEEecCCCCcccc-cc---c-
Q 001992 524 YFALQLPKGW--WVFGLDLAL-----------HCDIDVYQFKFFAELVKEQVG-ERDSVIIMTHEPNWLLDW-YF---N- 584 (985)
Q Consensus 524 YFAlrLP~~w--WLlGLDsql-----------~gdID~~Q~~wF~~ll~~~v~-~~d~VIL~tHeP~w~~~~-~~---~- 584 (985)
||+++.-.+| .+|+||+-. .|.+|.+|++||++.|++ .+ .+..||++.|+|..+.+. .. .
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~-a~a~~p~VVV~hHpPi~t~gi~~md~w~~ 372 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELAR-GQADGQLMIIAAHIPIAVSPIGSEMEWWL 372 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHh-CcCCCceEEEEeCCCcccCCccchhhhcc
Confidence 8999954335 999999763 355899999999999974 44 445678888888775211 10 0
Q ss_pred -c----C-cchhh-HHHHHhhh-C-CceeEEEcCccC
Q 001992 585 -N----V-SGKNV-KHLICDYL-K-GRCKLRIAGDMH 612 (985)
Q Consensus 585 -~----~-~~~~l-~~lle~~L-~-~RV~L~LSGHiH 612 (985)
. + ..... ...+.++| + .+|.++||||+|
T Consensus 373 ~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvH 409 (492)
T TIGR03768 373 GAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRH 409 (492)
T ss_pred ccccccccccccccHHHHHHHHhcCCCeEEEEcCCcc
Confidence 0 0 00001 01233444 2 379999999999
No 30
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.48 E-value=7.1e-07 Score=97.70 Aligned_cols=208 Identities=18% Similarity=0.135 Sum_probs=106.3
Q ss_pred CCCCceEEEEEeccC-CCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCC--CCChhhhhhccccchhhh
Q 001992 377 SEKEDLWFDFMADTG-DGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYP--NPSAFTYERRLFRPFEYA 453 (985)
Q Consensus 377 ~~d~~lwFd~VADtG-DG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP--~gs~e~Y~~Rf~~PYe~A 453 (985)
....++-+.+++|+= ..+. .-..+.+.+-.+ ..| |+++++||++.. ....+...+.+ ++.
T Consensus 40 ~~~~~~~iv~lSDlH~~~~~-~~~~~~~~~i~~----------~~~--DlivltGD~~~~~~~~~~~~~~~~L-~~L--- 102 (284)
T COG1408 40 ASLQGLKIVQLSDLHSLPFR-EEKLALLIAIAN----------ELP--DLIVLTGDYVDGDRPPGVAALALFL-AKL--- 102 (284)
T ss_pred cccCCeEEEEeehhhhchhh-HHHHHHHHHHHh----------cCC--CEEEEEeeeecCCCCCCHHHHHHHH-Hhh---
Confidence 345777899999993 2322 222333332221 134 999999997764 11111221111 222
Q ss_pred cCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHH-HHhhccc--c--CCccccCCCc-ceEEE
Q 001992 454 LQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFM-RFICHKS--W--LGGWFMPQKK-SYFAL 527 (985)
Q Consensus 454 l~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~-R~F~~r~--~--lgGW~mpQ~~-SYFAl 527 (985)
+ ....+|||.|||||+....... ..+.... . ..+....+.. .++.
T Consensus 103 --------------------------~--~~~gv~av~GNHd~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 153 (284)
T COG1408 103 --------------------------K--APLGVFAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIE- 153 (284)
T ss_pred --------------------------h--ccCCEEEEecccccccccccchhhhhhhhcceeeecccchhccccccccc-
Confidence 1 1233999999999998865532 2222111 0 0011111111 0100
Q ss_pred ECCCcEEEEEEecCCCCCCCHHHHHH---HHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCcee
Q 001992 528 QLPKGWWVFGLDLALHCDIDVYQFKF---FAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCK 604 (985)
Q Consensus 528 rLP~~wWLlGLDsql~gdID~~Q~~w---F~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~ 604 (985)
.....-|..++|.+..... ..+.++ ..+.+ .+.+++...|+++|+|...... -.+.++
T Consensus 154 ~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~IlL~H~P~~~~~~-----------------~~~~~d 214 (284)
T COG1408 154 VGGLDLYLAGVEDILAGLP-LAPFTIGLDIAEAL-KQLDEDLPGILLSHEPDIILQL-----------------RLYGVD 214 (284)
T ss_pred ccccccccccCchHHhhCc-ccccccccchhhhh-ccccccccceEeccCCceehhh-----------------ccCcce
Confidence 1111245666655543322 000000 12222 3567788999999999975531 124799
Q ss_pred EEEcCccCCCcceeecC-------C-----CCC--cccceEEEecCCCCcCcccccCCC
Q 001992 605 LRIAGDMHHYMRHSYVP-------S-----DGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (985)
Q Consensus 605 L~LSGHiHhY~R~~~~~-------~-----~G~--~~~~~~IVsGGGGAfLhPTH~~~~ 649 (985)
|+||||+|.=|-..|.. . .|. +-+.+++||.|-|..--|.|...+
T Consensus 215 LvLSGHTHGGQi~~p~~~~l~~~~~~~~~~~g~~~~~~~~lyVSrGlG~~~~p~R~~~~ 273 (284)
T COG1408 215 LVLSGHTHGGQIRLPLWGPLVTNALSGRYRAGGLRQFGAQLYVSRGLGTTGPPIRLGCP 273 (284)
T ss_pred EEEeccccCCeEEeecccccccccccccccccceecCCceEEEeCCcCCCCCCcccCCC
Confidence 99999999433332211 0 111 112368999999987677766554
No 31
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.36 E-value=1e-06 Score=84.72 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=31.2
Q ss_pred CCeEEEEecCCCCcccccccc---CcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 565 RDSVIIMTHEPNWLLDWYFNN---VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~---~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
++..|+++|.|.+....+... ...+.+...+++ .++++.++||+|...
T Consensus 67 ~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQR---VRPKLHVFGHIHEGY 117 (135)
T ss_pred CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHH---HCCcEEEEcCcCCcC
Confidence 467899999999876433211 112234444444 478999999999753
No 32
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.04 E-value=1.3e-05 Score=81.31 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=26.3
Q ss_pred EEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeecC
Q 001992 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (985)
Q Consensus 569 IL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~~ 621 (985)
|+++|+|.+. .++ +.+++++||||+|.+.+.....
T Consensus 119 i~l~H~p~~~---------------~~~---~~~~~~~lsGH~H~~~~~~~~~ 153 (171)
T cd07384 119 ILLTHIPLYR---------------LLD---TIKPVLILSGHDHDQCEVVHSS 153 (171)
T ss_pred eeEECCccHH---------------HHh---ccCceEEEeCcccCCeEEEecC
Confidence 9999999853 111 3478899999999987776553
No 33
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.00 E-value=1.6e-05 Score=83.18 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=30.3
Q ss_pred EEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeec
Q 001992 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (985)
Q Consensus 569 IL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~ 620 (985)
|+++|-|.+.... .-..+.+. +.++.+.+|||.|.+..++..
T Consensus 112 i~lsH~P~~~~~~-------~~~~~~~~---~~~p~~Ifs~H~H~s~~~~~~ 153 (195)
T cd08166 112 IMLSHVPLLAEGG-------QALKHVVT---DLDPDLIFSAHRHKSSIFMYD 153 (195)
T ss_pred eeeeccccccccc-------HHHHHHHH---hcCceEEEEcCccceeeEEee
Confidence 9999999987642 11222233 458999999999998887644
No 34
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=97.91 E-value=0.00014 Score=83.81 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=33.4
Q ss_pred CcceEEEECCCcEEEEEEecCCCC---------------------CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 521 KKSYFALQLPKGWWVFGLDLALHC---------------------DIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 521 ~~SYFAlrLP~~wWLlGLDsql~g---------------------dID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
.+.|+.++.+...-|+.||+-..- -+...|++||++.+++ ....++|+++.-|.
T Consensus 252 ~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~--s~a~~kvi~s~v~~ 326 (453)
T PF09423_consen 252 GRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS--SQATWKVIGSSVPF 326 (453)
T ss_dssp ----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH----SSEEEEE-SS--
T ss_pred CceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc--CCCcEEEEEeCCce
Confidence 446999999987889999996421 1346899999998874 33688898877664
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=97.73 E-value=0.0004 Score=74.89 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=37.4
Q ss_pred hcCCCCeEEEEecCCCCcccccccc-----------Ccc-hhhHHHHHhhh-CCceeEEEcCccCCCccee
Q 001992 561 QVGERDSVIIMTHEPNWLLDWYFNN-----------VSG-KNVKHLICDYL-KGRCKLRIAGDMHHYMRHS 618 (985)
Q Consensus 561 ~v~~~d~VIL~tHeP~w~~~~~~~~-----------~~~-~~l~~lle~~L-~~RV~L~LSGHiHhY~R~~ 618 (985)
.++++++.|+++|.|..-.+...++ .-| ..+...+.++- +.+++|++.||+||=-|+.
T Consensus 142 ~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~ 212 (238)
T cd07397 142 KAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRG 212 (238)
T ss_pred hcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCccccc
Confidence 4577889999999998666422111 012 23434455443 4568999999999976664
No 36
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=97.69 E-value=6.8e-05 Score=78.48 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=24.3
Q ss_pred EEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001992 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (985)
Q Consensus 569 IL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~ 618 (985)
|+++|+|.+... .+.+++++||||+|.=+++.
T Consensus 129 ilL~H~P~~~~~------------------~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYKIF------------------LEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEcccceecc------------------ccCCCCEEEeCccCCCeEEE
Confidence 999999987621 02478999999999866554
No 37
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.62 E-value=9.6e-05 Score=74.02 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=23.8
Q ss_pred EEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeec
Q 001992 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (985)
Q Consensus 569 IL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~ 620 (985)
|++.|+|... .+.+ .++++.||||+|...+....
T Consensus 107 ~~l~H~p~~~---------------~~~~---~~~~~~l~GH~H~~~~~~~~ 140 (156)
T cd08165 107 ILLQHFPLYR---------------LLQW---LKPRLVLSGHTHSFCEVTHP 140 (156)
T ss_pred eeeeCChHHH---------------HHHh---hCCCEEEEcccCCCceeEEE
Confidence 8999999732 1122 36779999999996666543
No 38
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.52 E-value=0.0022 Score=68.78 Aligned_cols=177 Identities=21% Similarity=0.256 Sum_probs=92.8
Q ss_pred ceEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCC-CChhhhhhccccchhhhcCCCCC
Q 001992 381 DLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN-PSAFTYERRLFRPFEYALQPPPW 459 (985)
Q Consensus 381 ~lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~-gs~e~Y~~Rf~~PYe~Al~~~~~ 459 (985)
.+-+.+++|+-...++.-++....+. -++|+|+++||++|-. +....-.+.. . .++
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~--------------~~~D~lviaGDlt~~~~~~~~~~~~~~-~-~e~------- 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAAD--------------IRADLLVIAGDLTYFHFGPKEVAEELN-K-LEA------- 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhh--------------ccCCEEEEecceehhhcCchHHHHhhh-H-HHH-------
Confidence 45677888986555555555443332 1469999999999433 2111111111 0 111
Q ss_pred CcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccccCCccccCCCcceEEEECCCcEEEEEE-
Q 001992 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGL- 538 (985)
Q Consensus 460 ~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~~lgGW~mpQ~~SYFAlrLP~~wWLlGL- 538 (985)
++. .+.+++|+|||=|- ..-.+.+.. .|-.+..+ ++++.. .-+.|+
T Consensus 60 -------------------l~~-~~~~v~avpGNcD~----~~v~~~l~~----~~~~v~~~----v~~i~~-~~~~G~G 106 (226)
T COG2129 60 -------------------LKE-LGIPVLAVPGNCDP----PEVIDVLKN----AGVNVHGR----VVEIGG-YGFVGFG 106 (226)
T ss_pred -------------------HHh-cCCeEEEEcCCCCh----HHHHHHHHh----cccccccc----eEEecC-cEEEEec
Confidence 122 23449999999653 111111111 11222222 455654 345553
Q ss_pred ecCCCC-----CC-CHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccc----ccCcchhhHHHHHhhhCCceeEEEc
Q 001992 539 DLALHC-----DI-DVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF----NNVSGKNVKHLICDYLKGRCKLRIA 608 (985)
Q Consensus 539 Dsql~g-----dI-D~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~----~~~~~~~l~~lle~~L~~RV~L~LS 608 (985)
.++... .. ++.=+..+...++...+ ... |+++|.|++....-. .+.....++.+++++ ++.+.++
T Consensus 107 gsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-~~~-Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieef---qP~l~i~ 181 (226)
T COG2129 107 GSNPTPFNTPREFSEDEIYSKLKSLVKKADN-PVN-ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEF---QPLLGLH 181 (226)
T ss_pred ccCCCCCCCccccCHHHHHHHHHHHHhcccC-cce-EEEecCCCCCccccCCCCccccchHHHHHHHHHh---CCceEEE
Confidence 222211 12 22335566666543111 122 999999999763221 112235577788886 7899999
Q ss_pred CccCCCccee
Q 001992 609 GDMHHYMRHS 618 (985)
Q Consensus 609 GHiHhY~R~~ 618 (985)
||+|-++-..
T Consensus 182 GHIHEs~G~d 191 (226)
T COG2129 182 GHIHESRGID 191 (226)
T ss_pred eeeccccccc
Confidence 9999854444
No 39
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.43 E-value=0.00081 Score=65.26 Aligned_cols=49 Identities=22% Similarity=0.066 Sum_probs=28.2
Q ss_pred eEEEEecCCCCcccccccc--CcchhhHHHHHhhhCCceeEEEcCccCCCccee
Q 001992 567 SVIIMTHEPNWLLDWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (985)
Q Consensus 567 ~VIL~tHeP~w~~~~~~~~--~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~ 618 (985)
..|+++|+|.+-....... ...+.+..+++ +.++++.|+||+|......
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~---~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDFAHRGFEAFLDFID---RFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred cCEEEECCCCCcCcCcccccccCHHHHHHHHH---HHCCcEEEEcCcCCCcCcc
Confidence 5689999998744321100 11122222333 4579999999999544443
No 40
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=97.37 E-value=0.0029 Score=67.95 Aligned_cols=133 Identities=19% Similarity=0.140 Sum_probs=69.4
Q ss_pred EEEeCCCCCCCCChhHHHHHhhcc--ccCC-cc------c-cCCCcceEEEECCCc-EEEEEEecCCCC--------C--
Q 001992 487 CYIIPGNHDWFDGLNTFMRFICHK--SWLG-GW------F-MPQKKSYFALQLPKG-WWVFGLDLALHC--------D-- 545 (985)
Q Consensus 487 ifAIPGNHDWyDGL~aF~R~F~~r--~~lg-GW------~-mpQ~~SYFAlrLP~~-wWLlGLDsql~g--------d-- 545 (985)
-++++||||+.-|.+.+.+.+.+- .+++ .. . .++-.+|-.++...- .=++|+.+.... .
T Consensus 73 d~~~~GNHefd~g~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~ 152 (257)
T cd07406 73 DLACFGNHEFDFGEDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVR 152 (257)
T ss_pred cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcce
Confidence 466899999977888777755322 1211 00 1 112235767776431 335666543211 1
Q ss_pred -CCHHHHHHHHHHHH-hhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeecCCC
Q 001992 546 -IDVYQFKFFAELVK-EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSD 623 (985)
Q Consensus 546 -ID~~Q~~wF~~ll~-~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~~~~ 623 (985)
.|. .+-+.+.++ .+.+.-|-||+++|-|... ...+.+++ ..++++|+||.|..+.- ...
T Consensus 153 ~~d~--~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------------d~~la~~~--~~iD~IlgGH~H~~~~~---~~~ 213 (257)
T cd07406 153 YRDY--VETARELVDELREQGADLIIALTHMRLPN------------DKRLAREV--PEIDLILGGHDHEYILV---QVG 213 (257)
T ss_pred EcCH--HHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHHHHhC--CCCceEEecccceeEee---eEC
Confidence 121 122222221 1123458999999998521 11233443 46999999999986521 111
Q ss_pred CCcccceEEEecCCCCcCc
Q 001992 624 GPVYVQHLLVNGCGGAFLH 642 (985)
Q Consensus 624 G~~~~~~~IVsGGGGAfLh 642 (985)
...++-+|+.|.++-
T Consensus 214 ----~t~vv~~g~~g~~vg 228 (257)
T cd07406 214 ----GTPIVKSGSDFRTVY 228 (257)
T ss_pred ----CEEEEeCCcCcceEE
Confidence 224555566665543
No 41
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=97.36 E-value=0.00072 Score=65.97 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=33.0
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCC
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGA 639 (985)
++..|+++|-+.+..... .+. ..+++ ..+++++++||+|...... .. ...+|..|.-|.
T Consensus 74 ~g~~i~v~Hg~~~~~~~~-----~~~-~~~~~---~~~~d~vi~GHtH~~~~~~-~~------~~~~inpGs~~~ 132 (155)
T cd00841 74 GGKRIFLTHGHLYGVKNG-----LDR-LYLAK---EGGADVVLYGHTHIPVIEK-IG------GVLLLNPGSLSL 132 (155)
T ss_pred CCEEEEEECCcccccccc-----hhh-hhhhh---hcCCCEEEECcccCCccEE-EC------CEEEEeCCCccC
Confidence 356788889887654311 011 11122 3478999999999654322 11 225566666443
No 42
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.32 E-value=0.0086 Score=63.15 Aligned_cols=119 Identities=18% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--cCC-ccc-------cCCCcceEEEECCC-cEEEEEEecCCCCCC------
Q 001992 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF-------MPQKKSYFALQLPK-GWWVFGLDLALHCDI------ 546 (985)
Q Consensus 484 gP~ifAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW~-------mpQ~~SYFAlrLP~-~wWLlGLDsql~gdI------ 546 (985)
++ -++++||||+.-|.+.+...+-+-. +++ +.. .+.-..|-.++... ..-++|+.+......
T Consensus 70 g~-d~~~~GNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 70 GY-DAVTIGNHEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred CC-CEEeeccccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 34 3456799998767776655543221 111 110 11112354555542 255777765432111
Q ss_pred ---C-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001992 547 ---D-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (985)
Q Consensus 547 ---D-~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~ 617 (985)
+ ....+-+++..++..++.|-||+++|-|.-. ...+.++. ..++++|+||.|..+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~~ 209 (252)
T cd00845 149 IGLPFEDLAEAVAVAEELLAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLEE 209 (252)
T ss_pred cCceecCHHHHHHHHHHHHhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccCC
Confidence 0 1112223322223345679999999988742 11223332 57999999999987653
No 43
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=97.31 E-value=0.00053 Score=65.83 Aligned_cols=60 Identities=15% Similarity=0.240 Sum_probs=36.6
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCC
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGGGGA 639 (985)
+...|+++|.+.+.... ..+.+. +.+...+++++++||+|..+..... +..+|..|+-+-
T Consensus 80 ~~~~i~~~H~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~GH~H~~~~~~~~-------~~~~~~~Gs~~~ 139 (156)
T PF12850_consen 80 DGFKILLSHGHPYDVQW-----DPAELR---EILSRENVDLVLHGHTHRPQVFKIG-------GIHVINPGSIGG 139 (156)
T ss_dssp TTEEEEEESSTSSSSTT-----THHHHH---HHHHHTTSSEEEESSSSSEEEEEET-------TEEEEEE-GSSS
T ss_pred cCCeEEEECCCCccccc-----Chhhhh---hhhcccCCCEEEcCCcccceEEEEC-------CEEEEECCcCCC
Confidence 47788899988776431 111222 2222568999999999986655411 236677776443
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.28 E-value=0.0011 Score=70.25 Aligned_cols=18 Identities=28% Similarity=0.257 Sum_probs=14.3
Q ss_pred CCceeEEEcCccCCCcce
Q 001992 600 KGRCKLRIAGDMHHYMRH 617 (985)
Q Consensus 600 ~~RV~L~LSGHiHhY~R~ 617 (985)
+++++++++||+|.-..+
T Consensus 185 ~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 185 KHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HhCCCEEEECcccCccee
Confidence 458999999999965444
No 45
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=97.25 E-value=0.0044 Score=64.82 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=37.0
Q ss_pred CCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceee
Q 001992 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSY 619 (985)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~ 619 (985)
+.+.+|||+|-|+.+.+. +...+.+.+|+ +||+..+-||+|.-+|=.+
T Consensus 157 ~~~~fivM~HYPP~s~~~-----t~~~~sevlee---~rv~~~lyGHlHgv~~p~~ 204 (230)
T COG1768 157 GVSKFIVMTHYPPFSDDG-----TPGPFSEVLEE---GRVSKCLYGHLHGVPRPNI 204 (230)
T ss_pred CcCeEEEEEecCCCCCCC-----CCcchHHHHhh---cceeeEEeeeccCCCCCCC
Confidence 358999999999988763 33345566665 6999999999998776543
No 46
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=97.20 E-value=0.011 Score=66.99 Aligned_cols=217 Identities=19% Similarity=0.137 Sum_probs=112.9
Q ss_pred CCCCceEEEEEecc--CCCCCC------chH------------HHHHhcCcccccccCCCccccCCccEEEEcccccCCC
Q 001992 377 SEKEDLWFDFMADT--GDGGNS------SYS------------VARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN 436 (985)
Q Consensus 377 ~~d~~lwFd~VADt--GDG~dS------tYa------------VA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~ 436 (985)
.+++++-+..+||+ |.|... .++ |.+.+| .-++|+|++.||+++-
T Consensus 49 ~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~--------------sE~PDlVVfTGD~i~g- 113 (379)
T KOG1432|consen 49 REDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA--------------SEKPDLVVFTGDNIFG- 113 (379)
T ss_pred cCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh--------------ccCCCEEEEeCCcccc-
Confidence 57889999999999 554111 122 222222 2356999999999997
Q ss_pred CChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChh-HHHHHhhc------
Q 001992 437 PSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN-TFMRFICH------ 509 (985)
Q Consensus 437 gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~-aF~R~F~~------ 509 (985)
-+.+++++-+..-..-+ -+ .+.++-|+.||||=-..++ ..++-|..
T Consensus 114 ~~t~Da~~sl~kAvaP~--------------------------I~-~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~ 166 (379)
T KOG1432|consen 114 HSTQDAATSLMKAVAPA--------------------------ID-RKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSL 166 (379)
T ss_pred cccHhHHHHHHHHhhhH--------------------------hh-cCCCeEEEecccccccccCHHHHHHHHhcCCCcc
Confidence 33445554443322211 12 3566999999999654433 12222221
Q ss_pred -cc-cCCccccCCC--cceEEEECC----------CcEEEEEEecCCC----------CCCCHHHHHHHHHHHHhhc---
Q 001992 510 -KS-WLGGWFMPQK--KSYFALQLP----------KGWWVFGLDLALH----------CDIDVYQFKFFAELVKEQV--- 562 (985)
Q Consensus 510 -r~-~lgGW~mpQ~--~SYFAlrLP----------~~wWLlGLDsql~----------gdID~~Q~~wF~~ll~~~v--- 562 (985)
+. ...|+...+. ..| -++++ ...=|..||+... +.|...|.+|+++.-.+.+
T Consensus 167 ~~v~p~dg~~~~~~g~gny-n~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~ 245 (379)
T KOG1432|consen 167 SQVNPPDGHMYIIDGFGNY-NLQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPN 245 (379)
T ss_pred ccCCCcccceeeeecccce-EEEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhccc
Confidence 11 1223322121 233 34432 1234677777521 3456899999999762211
Q ss_pred -CCCC-eEEEEecCCCCcccccccc-C------c----chhhHHHHHhhh-CCceeEEEcCccCCCcceeecCCCCCccc
Q 001992 563 -GERD-SVIIMTHEPNWLLDWYFNN-V------S----GKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYV 628 (985)
Q Consensus 563 -~~~d-~VIL~tHeP~w~~~~~~~~-~------~----~~~l~~lle~~L-~~RV~L~LSGHiHhY~R~~~~~~~G~~~~ 628 (985)
..++ +=+..-|-|.=.......+ + + ...-...+..+- ..+|+.+++||.|.--=.-+.+ |
T Consensus 246 ~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k--~---- 319 (379)
T KOG1432|consen 246 SKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELK--G---- 319 (379)
T ss_pred CccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecccC--C----
Confidence 1223 6667778776333222110 0 0 000112333333 5789999999999622111111 1
Q ss_pred ceEEEecCCCCcCcc
Q 001992 629 QHLLVNGCGGAFLHP 643 (985)
Q Consensus 629 ~~~IVsGGGGAfLhP 643 (985)
.+--|=||||--|.
T Consensus 320 -~~wlCygGgaGygg 333 (379)
T KOG1432|consen 320 -ELWLCYGGGAGYGG 333 (379)
T ss_pred -eEEEEecCCCccCC
Confidence 24556666665554
No 47
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.17 E-value=0.001 Score=71.57 Aligned_cols=161 Identities=21% Similarity=0.321 Sum_probs=75.6
Q ss_pred CccEEEEcccccCCCCChhhhhhcc---ccchhhhcCCCCCCcccccccCCCCCCC----------CC-cccccCCCCcE
Q 001992 422 RGDVLLIGGDLAYPNPSAFTYERRL---FRPFEYALQPPPWYKKDHVAVNKPEVPS----------GV-PELKQYDGPQC 487 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~e~Y~~Rf---~~PYe~Al~~~~~~~~e~i~~~~pe~P~----------~~-~~l~~~~gP~i 487 (985)
++|.|++.||+.=+.+...+|++-- -+| +|++.=+ +. ..|.+ -++++
T Consensus 32 ~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p------------------~k~~i~~e~~~~~e~~~~ff~~L~~-~~~p~ 92 (255)
T PF14582_consen 32 GPDAVVFVGDLLKAEARSDEYERAQEEQREP------------------DKSEINEEECYDSEALDKFFRILGE-LGVPV 92 (255)
T ss_dssp T-SEEEEES-SS-TCHHHHHHHHHHHTT----------------------THHHHHHHHHHHHHHHHHHHHHHC-C-SEE
T ss_pred CCCEEEEeccccccchhhhHHHHHhhhccCc------------------chhhhhhhhhhhHHHHHHHHHHHHh-cCCcE
Confidence 5699999999988887777887210 011 0000000 00 01222 35679
Q ss_pred EEeCCCCCCCCChhHHHHHhhcccc-CCccccCCCcceEEEECCCcEEEEEEecCCCCC--CC--H-----HHHHHHHHH
Q 001992 488 YIIPGNHDWFDGLNTFMRFICHKSW-LGGWFMPQKKSYFALQLPKGWWVFGLDLALHCD--ID--V-----YQFKFFAEL 557 (985)
Q Consensus 488 fAIPGNHDWyDGL~aF~R~F~~r~~-lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~gd--ID--~-----~Q~~wF~~l 557 (985)
+.||||||=+ +..|+|.-..... ....++-++ |+|-.+-+ +-++|+.-....+ .+ . --.+|-.+.
T Consensus 93 ~~vPG~~Dap--~~~~lr~a~~~e~v~p~~~~vH~-sf~~~~g~--y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~ 167 (255)
T PF14582_consen 93 FVVPGNMDAP--ERFFLREAYNAEIVTPHIHNVHE-SFFFWKGE--YLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKF 167 (255)
T ss_dssp EEE--TTS-S--HHHHHHHHHHCCCC-TTEEE-CT-CEEEETTT--EEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGG
T ss_pred EEecCCCCch--HHHHHHHHhccceeccceeeeee-eecccCCc--EEEEecCccccCCCccccccccchHHHHHHHHHH
Confidence 9999999963 2245554333111 222333343 34333323 4578875432211 11 0 122344344
Q ss_pred HHhhcCCCCeEEEEecCCC-CccccccccCcchhhHHHHHhhhCCceeEEEcCccCC
Q 001992 558 VKEQVGERDSVIIMTHEPN-WLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (985)
Q Consensus 558 l~~~v~~~d~VIL~tHeP~-w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHh 613 (985)
+.+ +. +.+.|++.|-|+ .-.+.. +.....+..+|+++ +.+++|+||+|-
T Consensus 168 l~e-lk-~~r~IlLfhtpPd~~kg~~--h~GS~~V~dlIk~~---~P~ivl~Ghihe 217 (255)
T PF14582_consen 168 LRE-LK-DYRKILLFHTPPDLHKGLI--HVGSAAVRDLIKTY---NPDIVLCGHIHE 217 (255)
T ss_dssp GGG-CT-SSEEEEEESS-BTBCTCTB--TTSBHHHHHHHHHH-----SEEEE-SSS-
T ss_pred HHh-cc-cccEEEEEecCCccCCCcc--cccHHHHHHHHHhc---CCcEEEeccccc
Confidence 433 33 458999999999 222211 12346677888886 889999999995
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.12 E-value=0.0049 Score=65.12 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=21.4
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecC
Q 001992 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (985)
Q Consensus 600 ~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGG 636 (985)
+.++++.++||+|.=+.+.-.. .|. ...+||.|.
T Consensus 183 ~~~~~~~i~GHtH~~~~~~~~~-~~~--~~~~~~lgd 216 (231)
T TIGR01854 183 RYGVDRLIHGHTHRPAIHPLQA-DGQ--PATRIVLGD 216 (231)
T ss_pred HcCCCEEEECCccCcceeeccc-CCC--ccEEEEECC
Confidence 4589999999999655443221 121 236788765
No 49
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.00 E-value=0.01 Score=64.80 Aligned_cols=51 Identities=8% Similarity=0.079 Sum_probs=33.2
Q ss_pred CCeEEEEecCCCCcccccccc-----------------C-cchhhHHHHHhhhCCceeEEEcCccCC-Cccee
Q 001992 565 RDSVIIMTHEPNWLLDWYFNN-----------------V-SGKNVKHLICDYLKGRCKLRIAGDMHH-YMRHS 618 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~-----------------~-~~~~l~~lle~~L~~RV~L~LSGHiHh-Y~R~~ 618 (985)
++.=|++||+|+.--..+.+. . ....++.+++.+ |.+..+|||.|. |++..
T Consensus 164 ~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~l---kPryhf~gH~H~~f~~~~ 233 (262)
T cd00844 164 QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHL---KPRYWFSAHLHVKFAALV 233 (262)
T ss_pred CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHh---CCCEEEEecCCcccceec
Confidence 356799999999876544321 0 112233455554 899999999995 66554
No 50
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=96.94 E-value=0.0034 Score=62.12 Aligned_cols=14 Identities=21% Similarity=0.188 Sum_probs=11.9
Q ss_pred CCceeEEEcCccCC
Q 001992 600 KGRCKLRIAGDMHH 613 (985)
Q Consensus 600 ~~RV~L~LSGHiHh 613 (985)
..+++++++||+|.
T Consensus 104 ~~~~d~vi~GHtH~ 117 (158)
T TIGR00040 104 ELGVDVLIFGHTHI 117 (158)
T ss_pred ccCCCEEEECCCCC
Confidence 35789999999995
No 51
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=96.88 E-value=0.02 Score=61.67 Aligned_cols=112 Identities=13% Similarity=0.072 Sum_probs=58.7
Q ss_pred EeCCCCCCCCChhHHHHHhhccc--cCC------ccccCCCcceEEEECCC-cEEEEEEecCCCCC---------CC-HH
Q 001992 489 IIPGNHDWFDGLNTFMRFICHKS--WLG------GWFMPQKKSYFALQLPK-GWWVFGLDLALHCD---------ID-VY 549 (985)
Q Consensus 489 AIPGNHDWyDGL~aF~R~F~~r~--~lg------GW~mpQ~~SYFAlrLP~-~wWLlGLDsql~gd---------ID-~~ 549 (985)
|+-||||+.-|.+.+.+.+-+-. ++. +...+.-.+|..++... ..=++|+.+..... +. ..
T Consensus 87 a~~GNHefd~g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T cd07411 87 AMVGHWEFTYGPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGI 166 (264)
T ss_pred EEecccccccCHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECC
Confidence 33399997768777666553221 111 01112222465555532 25577776542111 10 11
Q ss_pred HHHHHHHHHHh--hcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 550 QFKFFAELVKE--QVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 550 Q~~wF~~ll~~--~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
..+.+.+.+.+ +.+..|-||+++|-+.-. -..+.+++ ..++++|+||.|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~------------~~~la~~~--~~iDlilgGH~H~~ 219 (264)
T cd07411 167 REEELQEVVVKLRREEGVDVVVLLSHNGLPV------------DVELAERV--PGIDVILSGHTHER 219 (264)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCchh------------hHHHHhcC--CCCcEEEeCccccc
Confidence 23444443221 124568999999987521 01233443 56999999999964
No 52
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.81 E-value=0.026 Score=60.94 Aligned_cols=122 Identities=19% Similarity=0.189 Sum_probs=61.2
Q ss_pred EEeCCCCCCCCChhHHHHHhhccc--cC-Cccc-----cCCCcceEEEECCCc--EEEEEEecCCCC---------CC--
Q 001992 488 YIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MPQKKSYFALQLPKG--WWVFGLDLALHC---------DI-- 546 (985)
Q Consensus 488 fAIPGNHDWyDGL~aF~R~F~~r~--~l-gGW~-----mpQ~~SYFAlrLP~~--wWLlGLDsql~g---------dI-- 546 (985)
++.+||||+.-|.+.+.+..-+-. ++ .... .|.-.+|..++...| .=++|+=+.... ++
T Consensus 86 ~~~lGNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~ 165 (277)
T cd07410 86 AGTLGNHEFNYGLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPNWEKPNLIGGLKF 165 (277)
T ss_pred EEeecccCcccCHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccccccCcccCCCcEE
Confidence 556799997667776666443211 11 1111 122235767777613 334555322110 11
Q ss_pred -CH-HHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcc-hhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 547 -DV-YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSG-KNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 547 -D~-~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~-~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
|. ...+...+.+++ +.-|-||+++|-+.-.... ..... .....+.+++ ..++++|+||.|...
T Consensus 166 ~d~~~~~~~~v~~lr~--~~~D~IIvl~H~g~~~~~~--~~~~~~~~~~~la~~~--~~vD~IlgGHsH~~~ 231 (277)
T cd07410 166 TDPVETAKKYVPKLRA--EGADVVVVLAHGGFERDLE--ESLTGENAAYELAEEV--PGIDAILTGHQHRRF 231 (277)
T ss_pred cCHHHHHHHHHHHHHH--cCCCEEEEEecCCcCCCcc--cccCCccHHHHHHhcC--CCCcEEEeCCCcccc
Confidence 21 123333333332 3458999999987653311 00111 1122344443 479999999999754
No 53
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=96.78 E-value=0.0063 Score=63.24 Aligned_cols=25 Identities=12% Similarity=-0.065 Sum_probs=20.0
Q ss_pred CCcceEEEECCCcEEEEEEecCCCC
Q 001992 520 QKKSYFALQLPKGWWVFGLDLALHC 544 (985)
Q Consensus 520 Q~~SYFAlrLP~~wWLlGLDsql~g 544 (985)
+..-|++++++....|+.||+...-
T Consensus 145 ~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 145 RGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred CceEEEEEecCCcceEEEEeccccc
Confidence 3457999999887689999987653
No 54
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=96.60 E-value=0.0026 Score=65.05 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=23.1
Q ss_pred HHhhh-CCceeEEEcCccCCCcceeecCCCCCcccceEEEecC
Q 001992 595 ICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (985)
Q Consensus 595 le~~L-~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGG 636 (985)
+.+.+ ..+++++++||+|.-...... ...++++|+
T Consensus 181 ~~~~~~~~~~~~~i~GH~H~~~~~~~~-------~~~~~n~G~ 216 (217)
T cd07398 181 VARLARRKGVDGVICGHTHRPALHELD-------GKLYINLGD 216 (217)
T ss_pred HHHHHHhcCCCEEEECCCCCCCeEEEC-------CEEEEECCC
Confidence 34433 578999999999976554422 226777764
No 55
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.59 E-value=0.0076 Score=65.00 Aligned_cols=17 Identities=35% Similarity=0.448 Sum_probs=13.9
Q ss_pred CcEEEeCCCCCCCCChh
Q 001992 485 PQCYIIPGNHDWFDGLN 501 (985)
Q Consensus 485 P~ifAIPGNHDWyDGL~ 501 (985)
.++++|+||||..+.+.
T Consensus 76 i~v~~i~GNHD~~~~~~ 92 (253)
T TIGR00619 76 IPIVVISGNHDSAQRLS 92 (253)
T ss_pred ceEEEEccCCCChhhcc
Confidence 35999999999877654
No 56
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.46 E-value=0.025 Score=65.44 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=26.6
Q ss_pred CeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 566 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
..-|++.|....... .+. ..-+++++...++++.||+|..+
T Consensus 201 ~fnIlv~Hq~~~~~~-----~~~----~ipe~llp~~fDYValGHiH~~~ 241 (405)
T TIGR00583 201 WFNLLVLHQNHAAHT-----STS----FLPESFIPDFFDLVIWGHEHECL 241 (405)
T ss_pred ceEEEEeCceecCCC-----Ccc----cCchhhhhccCcEEEeccccccc
Confidence 357999999863221 111 12245555679999999999754
No 57
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.28 E-value=0.087 Score=56.62 Aligned_cols=122 Identities=20% Similarity=0.221 Sum_probs=61.9
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--cCC-ccc-----cCCCcceEEEECCCc--EEEEEEecCCC------CC--
Q 001992 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF-----MPQKKSYFALQLPKG--WWVFGLDLALH------CD-- 545 (985)
Q Consensus 484 gP~ifAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW~-----mpQ~~SYFAlrLP~~--wWLlGLDsql~------gd-- 545 (985)
+..+. .+||||+.-|++.+.+..-+-. +++ ... .+.-.+|-.++...| .=++|+-+... ..
T Consensus 70 g~d~~-~~GNHefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~ 148 (257)
T cd07408 70 GYDAV-TPGNHEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVK 148 (257)
T ss_pred CCcEE-ccccccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccC
Confidence 45454 5799998778887776553221 111 111 111124655566524 34566654211 11
Q ss_pred -C---CH--HHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001992 546 -I---DV--YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (985)
Q Consensus 546 -I---D~--~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R 616 (985)
+ |. .-.++..+.++ .+.-|-||+++|.+...... ......+.++ -..++++|+||.|....
T Consensus 149 ~~~~~d~~~~~~~~~v~~l~--~~~~D~iIvl~H~G~~~~~~------~~~~~~la~~--~~giDvIigGH~H~~~~ 215 (257)
T cd07408 149 DVTFEDPIEEAKKVIVAALK--AKGADVIVALGHLGVDRTSS------PWTSTELAAN--VTGIDLIIDGHSHTTIE 215 (257)
T ss_pred CcEEecHHHHHHHHHHHHHH--hCCCCEEEEEeCcCcCCCCC------CccHHHHHHh--CCCceEEEeCCCccccc
Confidence 1 21 11222111121 13458999999988754321 1111223333 24699999999997654
No 58
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.19 E-value=0.017 Score=62.60 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=21.2
Q ss_pred CCceeEEEcCccCCCcceeecCCCCCcccceEEEecC
Q 001992 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (985)
Q Consensus 600 ~~RV~L~LSGHiHhY~R~~~~~~~G~~~~~~~IVsGG 636 (985)
++.|+.+++||+|+-+-+. .+ +..+||.|.
T Consensus 185 ~~~vd~vI~GH~Hr~ai~~-i~------~~~yi~lGd 214 (237)
T COG2908 185 RHGVDGVIHGHTHRPAIHN-IP------GITYINLGD 214 (237)
T ss_pred HcCCCEEEecCcccHhhcc-CC------CceEEecCc
Confidence 6789999999999743332 11 247888865
No 59
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=96.14 E-value=0.12 Score=56.53 Aligned_cols=117 Identities=14% Similarity=0.161 Sum_probs=60.7
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--cCC-ccc--------cCCCcceEEEECCC-cEEEEEEecCCCC-------
Q 001992 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF--------MPQKKSYFALQLPK-GWWVFGLDLALHC------- 544 (985)
Q Consensus 484 gP~ifAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW~--------mpQ~~SYFAlrLP~-~wWLlGLDsql~g------- 544 (985)
+..+. .+||||+--|.+.+.+.+-+-. +++ +.. .+.-.+|-.++... ..-++|+-+....
T Consensus 82 g~D~~-~lGNHefd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~ 160 (281)
T cd07409 82 GYDAM-TLGNHEFDDGVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGG 160 (281)
T ss_pred CCCEE-EeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCC
Confidence 45455 4699999888887776554322 111 111 11123464555422 2567777554321
Q ss_pred CCC-HHHHHHHHHHHHhh-cCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 545 DID-VYQFKFFAELVKEQ-VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 545 dID-~~Q~~wF~~ll~~~-v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
.+. ....+-.++.+++. .+.-|-||+++|-..= . -..+.+++ ..++++++||.|...
T Consensus 161 ~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~---------~---d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 161 KVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYE---------V---DKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred ceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCch---------h---HHHHHHcC--CCCcEEEeCCcCccc
Confidence 111 01122333433211 1235889999998641 0 11344444 469999999999753
No 60
>PHA02546 47 endonuclease subunit; Provisional
Probab=96.11 E-value=0.039 Score=61.99 Aligned_cols=14 Identities=36% Similarity=0.705 Sum_probs=11.8
Q ss_pred CCcEEEeCCCCCCC
Q 001992 484 GPQCYIIPGNHDWF 497 (985)
Q Consensus 484 gP~ifAIPGNHDWy 497 (985)
+.++++||||||.+
T Consensus 76 gi~v~~I~GNHD~~ 89 (340)
T PHA02546 76 GITLHVLVGNHDMY 89 (340)
T ss_pred CCeEEEEccCCCcc
Confidence 45699999999975
No 61
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=95.92 E-value=0.0092 Score=68.83 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=17.7
Q ss_pred CcEEEeCCCCCCCCChhHHHHHh
Q 001992 485 PQCYIIPGNHDWFDGLNTFMRFI 507 (985)
Q Consensus 485 P~ifAIPGNHDWyDGL~aF~R~F 507 (985)
.++++|+||||.+..+....+.+
T Consensus 75 ~~v~~I~GNHD~~~~l~~~~~~l 97 (407)
T PRK10966 75 CQLVVLAGNHDSVATLNESRDLL 97 (407)
T ss_pred CcEEEEcCCCCChhhhhhHHHHH
Confidence 34999999999988876555544
No 62
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=95.91 E-value=0.054 Score=64.92 Aligned_cols=97 Identities=16% Similarity=0.213 Sum_probs=63.2
Q ss_pred cCCCcceEEEECCCcEEEEEEecCCC---------CCCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCc
Q 001992 518 MPQKKSYFALQLPKGWWVFGLDLALH---------CDID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS 587 (985)
Q Consensus 518 mpQ~~SYFAlrLP~~wWLlGLDsql~---------gdID-~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~ 587 (985)
+-+++.||+.....|-.++.|++.-. ...| .+|++||..+++++-..++.|=+++|=|.=.........
T Consensus 301 t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~GekVhil~HIPpG~~~c~~~ws- 379 (577)
T KOG3770|consen 301 TFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAGEKVHILGHIPPGDGVCLEGWS- 379 (577)
T ss_pred hhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcCCEEEEEEeeCCCCcchhhhhh-
Confidence 33566799999999999999998621 1223 578999999998666778999999999985432211100
Q ss_pred chhhHHHHHhhhCCceeEEEcCccC-CCcce
Q 001992 588 GKNVKHLICDYLKGRCKLRIAGDMH-HYMRH 617 (985)
Q Consensus 588 ~~~l~~lle~~L~~RV~L~LSGHiH-hY~R~ 617 (985)
.+....+.++ ..-+.-.+-||.| ...|.
T Consensus 380 -~~f~~iv~r~-~~tI~gqf~GH~h~d~f~v 408 (577)
T KOG3770|consen 380 -INFYRIVNRF-RSTIAGQFYGHTHIDEFRV 408 (577)
T ss_pred -HHHHHHHHHH-HHhhhhhccccCcceeEEE
Confidence 1111122222 2346678999999 44443
No 63
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=95.84 E-value=0.045 Score=56.24 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=12.9
Q ss_pred CCceeEEEcCccCCCc
Q 001992 600 KGRCKLRIAGDMHHYM 615 (985)
Q Consensus 600 ~~RV~L~LSGHiHhY~ 615 (985)
+..++++++||+|.-.
T Consensus 104 ~~~~dvii~GHTH~p~ 119 (178)
T cd07394 104 QLDVDILISGHTHKFE 119 (178)
T ss_pred hcCCCEEEECCCCcce
Confidence 3578999999999643
No 64
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.18 E-value=0.013 Score=66.45 Aligned_cols=52 Identities=27% Similarity=0.402 Sum_probs=33.3
Q ss_pred CccEEEEcccccCCCCChhhhhh-ccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001992 422 RGDVLLIGGDLAYPNPSAFTYER-RLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~e~Y~~-Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL 500 (985)
+.|+||++|| +|..+....+.. ++.+-++. +++ .+.++|+|+||||.-+++
T Consensus 40 ~vD~vliAGD-lFd~~~Ps~~a~~~~~~~l~~--------------------------l~~-~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 40 KVDFVLIAGD-LFDTNNPSPRALKLFLEALRR--------------------------LKD-AGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred cCCEEEEccc-cccCCCCCHHHHHHHHHHHHH--------------------------hcc-CCCcEEEecCCCCchhcc
Confidence 3499999999 577765544442 33222221 222 356699999999987664
Q ss_pred h
Q 001992 501 N 501 (985)
Q Consensus 501 ~ 501 (985)
.
T Consensus 92 ~ 92 (390)
T COG0420 92 S 92 (390)
T ss_pred c
Confidence 4
No 65
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=94.97 E-value=0.87 Score=50.00 Aligned_cols=116 Identities=22% Similarity=0.267 Sum_probs=59.0
Q ss_pred CCCcEEEeCCCCCCCCC-hhHHHHHhhccccCCccc--cCCCcceEEEECCCcEE--EEEEecC-CCCCCCHHHHHHHHH
Q 001992 483 DGPQCYIIPGNHDWFDG-LNTFMRFICHKSWLGGWF--MPQKKSYFALQLPKGWW--VFGLDLA-LHCDIDVYQFKFFAE 556 (985)
Q Consensus 483 ~gP~ifAIPGNHDWyDG-L~aF~R~F~~r~~lgGW~--mpQ~~SYFAlrLP~~wW--LlGLDsq-l~gdID~~Q~~wF~~ 556 (985)
-+..++.+ |||+|=.| +..++......-...... .|. +.|..++.. |.- ++++-.. ....++.+ ++-.++
T Consensus 57 ~G~D~iTl-GNH~fD~gel~~~l~~~~~~l~~aN~~~~~pg-~~~~i~~~~-G~kIaVigl~g~~~~~~~~~P-~~~~~~ 132 (255)
T cd07382 57 AGVDVITM-GNHTWDKKEILDFIDEEPRLLRPANYPPGTPG-RGYGVVEVN-GKKIAVINLMGRVFMPPLDNP-FRAADE 132 (255)
T ss_pred cCCCEEEe-cccccCcchHHHHHhcCcCceEeeecCCCCCC-CCeEEEEEC-CEEEEEEEEecccCCCcCCCH-HHHHHH
Confidence 35556666 99999666 334443221100011111 221 246666665 444 4444311 11123333 334555
Q ss_pred HHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 557 LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 557 ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
.+++....-|-||+.+|--. +.+ ...+...+.++|++++.||+|.-
T Consensus 133 ~v~~lk~~~D~IIV~~H~g~----------tsE--k~ala~~ldg~VdvIvGtHTHv~ 178 (255)
T cd07382 133 LLEELKEEADIIFVDFHAEA----------TSE--KIALGWYLDGRVSAVVGTHTHVQ 178 (255)
T ss_pred HHHHHhcCCCEEEEEECCCC----------CHH--HHHHHHhCCCCceEEEeCCCCcc
Confidence 55422223578999999732 111 11233455779999999999964
No 66
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=94.02 E-value=0.86 Score=59.30 Aligned_cols=188 Identities=15% Similarity=0.102 Sum_probs=92.3
Q ss_pred CceEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEE-cccccCCCCChhhhhhccccchhhhcCCCC
Q 001992 380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLI-GGDLAYPNPSAFTYERRLFRPFEYALQPPP 458 (985)
Q Consensus 380 ~~lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIl-gGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~ 458 (985)
.++.+-.+.|+=........++.++.+... ..+++|++ +||.. .|+...-..+- +|.-.+|
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~-----------~~~~~l~ld~GD~~--~gs~~~~~~~g-~~~~~~l---- 720 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKE-----------ENPNTILVDAGDVY--QGSLYSNLLKG-LPVLKMM---- 720 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHh-----------hCCCeEEEecCCCC--CCcchhhhcCC-hHHHHHH----
Confidence 459999999995322334456666654220 12355655 99955 44431111111 2222222
Q ss_pred CCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccc--------------cCCc---c-ccCC
Q 001992 459 WYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKS--------------WLGG---W-FMPQ 520 (985)
Q Consensus 459 ~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWyDGL~aF~R~F~~r~--------------~lgG---W-~mpQ 520 (985)
+. -+. -++++||||+.-|.+.+.+..-+-. +++. + ...+
T Consensus 721 ---------------------n~-lg~-d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~ 777 (1163)
T PRK09419 721 ---------------------KE-MGY-DASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGK 777 (1163)
T ss_pred ---------------------hC-cCC-CEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCc
Confidence 11 123 3559999999988887777664311 1111 1 1111
Q ss_pred C----cceEEEECCCc--EEEEEEecCC------CC---CCC-HHHHHHHHHHHHh--hcCCCCeEEEEecCCCCccccc
Q 001992 521 K----KSYFALQLPKG--WWVFGLDLAL------HC---DID-VYQFKFFAELVKE--QVGERDSVIIMTHEPNWLLDWY 582 (985)
Q Consensus 521 ~----~SYFAlrLP~~--wWLlGLDsql------~g---dID-~~Q~~wF~~ll~~--~v~~~d~VIL~tHeP~w~~~~~ 582 (985)
. ..|..++.. | .=++|+-+.. .. .+. ....+-.++.+++ +.+.-|-||+++|...-....
T Consensus 778 ~~~~~~py~I~e~~-G~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~- 855 (1163)
T PRK09419 778 LVSWAKPYILVEVN-GKKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRT- 855 (1163)
T ss_pred cccccCCEEEEEEC-CEEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccc-
Confidence 1 246555543 3 3356664321 01 111 0112223333221 013458999999998643211
Q ss_pred cccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 583 FNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 583 ~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
........+.+++ ..++++|+||.|...
T Consensus 856 ---~~~~~~~~lA~~v--~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 856 ---TGEITGLELAKKV--KGVDAIISAHTHTLV 883 (1163)
T ss_pred ---ccccHHHHHHHhC--CCCCEEEeCCCCccc
Confidence 0011122344443 359999999999754
No 67
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=93.94 E-value=1.2 Score=49.50 Aligned_cols=85 Identities=15% Similarity=0.213 Sum_probs=45.9
Q ss_pred cceEEEECCCcEE--EEEEecCCC---CCC---C---HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchh
Q 001992 522 KSYFALQLPKGWW--VFGLDLALH---CDI---D---VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKN 590 (985)
Q Consensus 522 ~SYFAlrLP~~wW--LlGLDsql~---gdI---D---~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~ 590 (985)
.+|..++..+|.. ++|+=+... ..+ | ..|.+|+.+.+++ +.-|-||+++|-..-... +...
T Consensus 136 ~~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~--~~~DvIIvlsH~G~~~d~-----~~~~- 207 (282)
T cd07407 136 SRYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN--EDVDLILVLGHMPVRDDA-----EFKV- 207 (282)
T ss_pred cceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh--cCCCEEEEEeCCCCCCCc-----cHHH-
Confidence 3576777754544 566643211 111 2 2344577776652 345889999998875331 1111
Q ss_pred hHHHHHhhhCCceeEEEcCccCCC
Q 001992 591 VKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 591 l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
....+.+.++...++.|+||.|..
T Consensus 208 ~~~~la~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 208 LHDAIRKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred HHHHHHHhCCCCCEEEEeCCcccc
Confidence 122233333333448999999974
No 68
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=93.52 E-value=0.039 Score=58.01 Aligned_cols=49 Identities=20% Similarity=0.252 Sum_probs=30.1
Q ss_pred CCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCC
Q 001992 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDW 496 (985)
++.|.|+++||++=-++...+--+.+.+..+.+. + .+-.++.|+||||.
T Consensus 31 ~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~--------------------------~-~~~~v~~l~GNHE~ 79 (208)
T cd07425 31 GGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAA--------------------------K-AGGKVHFLLGNHEL 79 (208)
T ss_pred CCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHH--------------------------h-cCCeEEEeeCCCcH
Confidence 4568999999987555554444444433332221 1 12349999999995
No 69
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=93.40 E-value=1.8 Score=47.77 Aligned_cols=50 Identities=16% Similarity=0.042 Sum_probs=29.5
Q ss_pred CCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
.-|-||+++|-.......... .... ...+.+++....++++|+||.|...
T Consensus 173 ~~D~VI~lsH~G~~~~~~~~~-~~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 173 KPDIVIAATHMGHYDNGEHGS-NAPG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCEEEEEecccccCCccccc-cCch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 458999999988753321111 0011 1123333323579999999999755
No 70
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.26 E-value=3.4 Score=45.58 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=29.5
Q ss_pred CCCeEEEEecCCCCccccccccCcc-hhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001992 564 ERDSVIIMTHEPNWLLDWYFNNVSG-KNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (985)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~~~-~~l~~lle~~L~~RV~L~LSGHiHhY~R 616 (985)
.-|-||+++|-..-........+.. .....++.+. ...++++|+||.|....
T Consensus 191 ~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 191 GVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRL-DPDVDVVFAGHTHQAYN 243 (288)
T ss_pred CCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhc-CCCCCEEEeCccCcccc
Confidence 4589999999876533221100000 0112233332 35799999999997654
No 71
>PRK04036 DNA polymerase II small subunit; Validated
Probab=93.11 E-value=0.087 Score=62.54 Aligned_cols=55 Identities=20% Similarity=0.171 Sum_probs=28.2
Q ss_pred CCceEEEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEccccc
Q 001992 379 KEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA 433 (985)
Q Consensus 379 d~~lwFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlv 433 (985)
+++.++.+++|+.-|.+....-+-.+-...++-..+++.....+.+.||++||++
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDiv 295 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLV 295 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCccc
Confidence 4678999999997554332211111111111100000001134668999999988
No 72
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=93.01 E-value=0.092 Score=53.00 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=24.0
Q ss_pred CCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcce
Q 001992 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (985)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~ 617 (985)
-+...|+++|.|..... . ..+.+++++||+|..+.-
T Consensus 105 ~~~~~i~l~H~~~~~~~----------~--------~~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 105 IGGRRVYLSHYPILEWN----------G--------LDRGSWNLHGHIHSNSPD 140 (168)
T ss_pred ECCEEEEEEeCCcccCC----------C--------CCCCeEEEEeeeCCCCCC
Confidence 35788999997643211 0 136789999999975444
No 73
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=92.73 E-value=0.094 Score=53.02 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.2
Q ss_pred CccEEEEcccccCCC
Q 001992 422 RGDVLLIGGDLAYPN 436 (985)
Q Consensus 422 RgdfLIlgGDlvYP~ 436 (985)
++|.||++||+....
T Consensus 41 ~~d~lii~GDl~~~~ 55 (172)
T cd07391 41 GPERLIILGDLKHSF 55 (172)
T ss_pred CCCEEEEeCcccccc
Confidence 468999999999643
No 74
>PRK09453 phosphodiesterase; Provisional
Probab=91.99 E-value=0.22 Score=50.68 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=11.1
Q ss_pred CceeEEEcCccCC
Q 001992 601 GRCKLRIAGDMHH 613 (985)
Q Consensus 601 ~RV~L~LSGHiHh 613 (985)
.++++++.||+|.
T Consensus 117 ~~~d~vi~GHtH~ 129 (182)
T PRK09453 117 HDGDVLVYGHTHI 129 (182)
T ss_pred cCCCEEEECCCCC
Confidence 3588999999995
No 75
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=90.93 E-value=3.6 Score=49.43 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=29.3
Q ss_pred CCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
.-|-||+++|.-........ +....-..+.+++=...|+++|+||.|.+-
T Consensus 209 ~~D~IV~LsH~G~~~~~~~~--~~~~~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 209 KPDVIIALTHMGHYDDGEHG--SNAPGDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCEEEEEeccccccCCccC--CCCccHHHHHHhCCccCceEEEeCCCCccc
Confidence 35889999998875332111 000111234444312479999999999753
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=90.76 E-value=0.79 Score=46.60 Aligned_cols=49 Identities=16% Similarity=0.081 Sum_probs=32.0
Q ss_pred CeEEEEecCCCCccccccc--------cCcchhhHHHHHhhhCCceeEEEcCccC-CCcce
Q 001992 566 DSVIIMTHEPNWLLDWYFN--------NVSGKNVKHLICDYLKGRCKLRIAGDMH-HYMRH 617 (985)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~--------~~~~~~l~~lle~~L~~RV~L~LSGHiH-hY~R~ 617 (985)
+.-||+||+|+..-....+ ......++.+++++ |.+..+|||.| .|+|-
T Consensus 69 ~~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~l---kPrYhf~gh~~~fyer~ 126 (150)
T cd07380 69 GVDILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKL---KPRYHFAGLEGVFYERE 126 (150)
T ss_pred CCCEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHc---CCCeEeecCCCceEeec
Confidence 5568999999976532211 11233455556654 88999999999 77763
No 77
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=90.75 E-value=0.23 Score=52.85 Aligned_cols=18 Identities=17% Similarity=0.115 Sum_probs=14.0
Q ss_pred CceeEEEcCccCCCccee
Q 001992 601 GRCKLRIAGDMHHYMRHS 618 (985)
Q Consensus 601 ~RV~L~LSGHiHhY~R~~ 618 (985)
...+++++||.|.+....
T Consensus 190 ~~p~vii~Gh~h~~~~~~ 207 (243)
T cd07386 190 EVPDILHTGHVHVYGVGV 207 (243)
T ss_pred CCCCEEEECCCCchHhEE
Confidence 467899999999865543
No 78
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.68 E-value=9.2 Score=45.59 Aligned_cols=119 Identities=19% Similarity=0.156 Sum_probs=64.0
Q ss_pred EeCCCCCCCCChhHHHHHhhccc--cC-Ccc------ccCCCcceEEEECCCc-EEEEEEecCCC---------CCCC-H
Q 001992 489 IIPGNHDWFDGLNTFMRFICHKS--WL-GGW------FMPQKKSYFALQLPKG-WWVFGLDLALH---------CDID-V 548 (985)
Q Consensus 489 AIPGNHDWyDGL~aF~R~F~~r~--~l-gGW------~mpQ~~SYFAlrLP~~-wWLlGLDsql~---------gdID-~ 548 (985)
+..||||..-|++.+.++.-+-. ++ +.. ..+.-.+|.-++.+.- .=++|+.+... .++. .
T Consensus 107 ~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~~~~~~~~f~ 186 (517)
T COG0737 107 MTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKPNAIEGVTFR 186 (517)
T ss_pred EeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccccccCCcEEc
Confidence 46799999999988888664432 11 111 1122236767776542 44677765211 1121 1
Q ss_pred HHHHHHHHHHHhhcCC--CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 549 YQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 549 ~Q~~wF~~ll~~~v~~--~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
...+...+.+.+ +.. -|-||+++|-+.-..........+. + ...+ ..+++.++||.|++
T Consensus 187 d~~e~~~~~i~e-lk~~~vD~iI~LsH~G~~~d~~~~~~~~~~-~-~~~~----~~iD~i~~GH~H~~ 247 (517)
T COG0737 187 DPIEAAKKYIPE-LKGEGVDVIIALSHLGIEDDLELASEVPGD-V-DVAV----PGIDLIIGGHSHTV 247 (517)
T ss_pred CHHHHHHHHHHH-HHhcCCCEEEEEeccCcCcccccccccccc-c-cccc----cCcceEeccCCccc
Confidence 223344443332 222 5899999999886553321111000 0 0011 22999999999975
No 79
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=89.33 E-value=1.2 Score=46.37 Aligned_cols=43 Identities=28% Similarity=0.392 Sum_probs=28.4
Q ss_pred CCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCC
Q 001992 563 GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (985)
Q Consensus 563 ~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHh 613 (985)
.-++..|++.|-|.=..+ + .+.+.+ +.+++.++++.|-||.|.
T Consensus 105 e~dg~~~~LsHyP~~~~~--~---~~~~~r---~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 105 EWDGEDVYLSHYPRPGQD--H---PGMESR---FDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred eECCeEEEEEeCCCCCCC--C---cchhhh---HHHHhccCCeEEeccccc
Confidence 346788899998874332 1 121221 334467999999999998
No 80
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=89.16 E-value=4.2 Score=49.11 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=56.6
Q ss_pred EEEeCCCCCCCCChhHHHHHhhccc--cCC-cc--c-----cCCCcceEEEECCC-cEEEEEEecCCC--------CCC-
Q 001992 487 CYIIPGNHDWFDGLNTFMRFICHKS--WLG-GW--F-----MPQKKSYFALQLPK-GWWVFGLDLALH--------CDI- 546 (985)
Q Consensus 487 ifAIPGNHDWyDGL~aF~R~F~~r~--~lg-GW--~-----mpQ~~SYFAlrLP~-~wWLlGLDsql~--------gdI- 546 (985)
=.+.+||||+=-|.+.+.+..-+-. ++. .. . .+.-.+|-.++... ..=++|+.+... .++
T Consensus 84 Da~~lGNHEFd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~ 163 (550)
T TIGR01530 84 DFFTLGNHEFDAGNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIK 163 (550)
T ss_pred CEEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceE
Confidence 4568999996557666655443221 111 11 0 01223565555422 266888864211 011
Q ss_pred --CH--HHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 547 --DV--YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 547 --D~--~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
|. .-.++..+ +++ +.-|-||+++|--.- .+ ..+.+++ ..++++|+||.|.+-
T Consensus 164 f~d~~~~~~~~v~~-Lk~--~g~D~II~lsH~g~~----------~d--~~la~~~--~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 164 FIDEIAAAQIAANA-LKQ--QGINKIILLSHAGFE----------KN--CEIAQKI--NDIDVIVSGDSHYLL 219 (550)
T ss_pred ECCHHHHHHHHHHH-HHh--CCCCEEEEEecCCcH----------HH--HHHHhcC--CCCCEEEeCCCCccc
Confidence 21 11222222 221 224889999997431 00 1233333 369999999999854
No 81
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=86.78 E-value=6.2 Score=44.46 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=25.5
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
-|-||+++|--.+..+ ..+.+++ ..++++|+||.|.+.
T Consensus 208 vD~II~LsH~g~~~~d-----------~~lA~~v--~gIDvIigGHsH~~l 245 (313)
T cd08162 208 INKIILLSHLQQISIE-----------QALAALL--SGVDVIIAGGSNTLL 245 (313)
T ss_pred CCEEEEEecccccchH-----------HHHHhcC--CCCCEEEeCCCCccC
Confidence 4889999998433211 1233333 369999999999864
No 82
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=86.31 E-value=1.2 Score=52.18 Aligned_cols=83 Identities=24% Similarity=0.283 Sum_probs=48.1
Q ss_pred CCCCceEEEEEecc---CCC-----------CCCchHHHHH--hcCcccccccCCCccccCCccEEEEcccccCCC--CC
Q 001992 377 SEKEDLWFDFMADT---GDG-----------GNSSYSVARL--LAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN--PS 438 (985)
Q Consensus 377 ~~d~~lwFd~VADt---GDG-----------~dStYaVA~L--lAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~--gs 438 (985)
++++.+....+||+ |+- +.+.+.+++. ++|. .-.||+++++||+.=-+ ..
T Consensus 44 ~~~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~------------~lkPdvvffLGDLfDeG~~~~ 111 (410)
T KOG3662|consen 44 SNENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQW------------RLKPDVVFFLGDLFDEGQWAG 111 (410)
T ss_pred CCCCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHh------------ccCCCEEEEeccccccCccCC
Confidence 34688999999999 632 2223333333 2232 23459999999965422 34
Q ss_pred hhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCC
Q 001992 439 AFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWF 497 (985)
Q Consensus 439 ~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDWy 497 (985)
.+++..+..+ +.-.+++ | ...++.-||||||.=
T Consensus 112 ~eEf~~~~~R-fkkIf~~------------k-------------~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 112 DEEFKKRYER-FKKIFGR------------K-------------GNIKVIYIAGNHDIG 144 (410)
T ss_pred hHHHHHHHHH-HHHhhCC------------C-------------CCCeeEEeCCccccc
Confidence 5666544433 4332221 1 234589999999973
No 83
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=85.64 E-value=9.6 Score=46.92 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=27.4
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
-|-||+++|...-... +. +...+....++++ ..|+++++||.|..
T Consensus 196 aDvII~LsH~G~~~d~-~~--~~~en~~~~l~~v--~gID~Il~GHsH~~ 240 (626)
T TIGR01390 196 ADIIVALAHSGISADP-YQ--PGAENSAYYLTKV--PGIDAVLFGHSHAV 240 (626)
T ss_pred CCEEEEEeccCcCCCc-cc--cccchHHHHHhcC--CCCCEEEcCCCCcc
Confidence 4889999998754321 11 1122222334443 46999999999974
No 84
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=85.02 E-value=18 Score=38.60 Aligned_cols=132 Identities=13% Similarity=0.070 Sum_probs=66.3
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhh--cccc---CC-ccccCCCcceEEEECCCc-EEEEEEecCCCCCCC--------
Q 001992 483 DGPQCYIIPGNHDWFDGLNTFMRFIC--HKSW---LG-GWFMPQKKSYFALQLPKG-WWVFGLDLALHCDID-------- 547 (985)
Q Consensus 483 ~gP~ifAIPGNHDWyDGL~aF~R~F~--~r~~---lg-GW~mpQ~~SYFAlrLP~~-wWLlGLDsql~gdID-------- 547 (985)
-+..+..+-+||++=-|.+++.+..- ++.- .| |-...+...|..++.+.. .=++|+-+.......
T Consensus 76 ~G~d~~tlaNNH~fD~G~~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~ 155 (239)
T cd07381 76 AGFDVVSLANNHTLDYGEEGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGG 155 (239)
T ss_pred hCCCEEEcccccccccchHHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCCcCcccCCccc
Confidence 46667788889998667666665431 1211 11 111111123555565431 456666443222110
Q ss_pred --HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceee
Q 001992 548 --VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSY 619 (985)
Q Consensus 548 --~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~ 619 (985)
..-.+-+.+.+++..+..|-||+.+|--. +. +.........+.+++....+++++.||.|..+..+.
T Consensus 156 ~~~~~~~~~~~~i~~lr~~~D~vIv~~H~G~---e~--~~~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E~ 224 (239)
T cd07381 156 VNPLDLERIAADIAEAKKKADIVIVSLHWGV---EY--SYYPTPEQRELARALIDAGADLVIGHHPHVLQGIEI 224 (239)
T ss_pred cCccCHHHHHHHHHHHhhcCCEEEEEecCcc---cC--CCCCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeEE
Confidence 00012233333221123688999999422 11 111112223344454445799999999999888765
No 85
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=84.92 E-value=35 Score=38.14 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=31.9
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCC
Q 001992 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (985)
Q Consensus 553 wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHh 613 (985)
-.++++++.....|-|||..|.-. ......+..++.+||++++.-|+|=
T Consensus 132 ~~d~~i~~lk~~~d~IIVd~Haea------------tsEK~a~~~~ldg~vsaVvGtHtHV 180 (266)
T TIGR00282 132 VLKELINMLKKDCDLIFVDFHAET------------TSEKNAFGMAFDGYVTAVVGTHTHV 180 (266)
T ss_pred HHHHHHHhhhcCCCEEEEEeCCCC------------HHHHHHHHHHhCCCccEEEeCCCCC
Confidence 345554432223578999998654 1123345666688999999999994
No 86
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=84.16 E-value=1.4 Score=46.05 Aligned_cols=18 Identities=33% Similarity=0.425 Sum_probs=13.8
Q ss_pred CccEEEEcccccCCCCCh
Q 001992 422 RGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~ 439 (985)
+.|.++++||++.-++..
T Consensus 28 ~~d~~~~~GD~v~~g~~~ 45 (207)
T cd07424 28 ARDRLISVGDLIDRGPES 45 (207)
T ss_pred CCCEEEEeCCcccCCCCH
Confidence 468999999988755543
No 87
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=83.64 E-value=22 Score=38.05 Aligned_cols=132 Identities=9% Similarity=0.056 Sum_probs=64.4
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhh--ccc---cCCc-cccCCCcceEEEECCC-cEEEEEEecCCCCC-----------
Q 001992 484 GPQCYIIPGNHDWFDGLNTFMRFIC--HKS---WLGG-WFMPQKKSYFALQLPK-GWWVFGLDLALHCD----------- 545 (985)
Q Consensus 484 gP~ifAIPGNHDWyDGL~aF~R~F~--~r~---~lgG-W~mpQ~~SYFAlrLP~-~wWLlGLDsql~gd----------- 545 (985)
+..+..+-+||+.=-|.+++.+..- .+. +.|. -...+...|..++.+. ..=++|+-+.....
T Consensus 73 G~d~~~laNNH~fD~G~~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~~~~~~~~~~g~~ 152 (239)
T smart00854 73 GFDVVSLANNHSLDYGEEGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNNGWAASKDRPGVA 152 (239)
T ss_pred CCCEEEeccCcccccchHHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCCCcccCCCCCCee
Confidence 4557777779998667666666442 111 1221 1111123355555542 14456653322110
Q ss_pred -CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcceeec
Q 001992 546 -IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (985)
Q Consensus 546 -ID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R~~~~ 620 (985)
++....+=..+.+++..+..|-||+++|--.-... .++ ...+.+.+++....++++++||.|..+..+..
T Consensus 153 ~~~~~~~~~i~~~i~~lr~~~D~vIv~~H~G~e~~~----~p~-~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e~~ 223 (239)
T smart00854 153 LLPDLDREKILADIARARKKADVVIVSLHWGVEYQY----EPT-DEQRELAHALIDAGADVVIGHHPHVLQPIEIY 223 (239)
T ss_pred ecCcCCHHHHHHHHHHHhccCCEEEEEecCccccCC----CCC-HHHHHHHHHHHHcCCCEEEcCCCCcCCceEEE
Confidence 11000111222222111235888899886542111 111 12233444544456999999999988877654
No 88
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=82.79 E-value=5.9 Score=41.32 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=26.1
Q ss_pred CCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCC
Q 001992 563 GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (985)
Q Consensus 563 ~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHh 613 (985)
.-++..|.++|-=.+.... ....++.+-++ ..+++++.||+|-
T Consensus 78 ~~~g~ki~l~HGh~~~~~~-----~~~~l~~la~~---~~~Dvli~GHTH~ 120 (172)
T COG0622 78 EVGGVKIFLTHGHLYFVKT-----DLSLLEYLAKE---LGADVLIFGHTHK 120 (172)
T ss_pred EECCEEEEEECCCcccccc-----CHHHHHHHHHh---cCCCEEEECCCCc
Confidence 3467889999974433110 11223333333 4799999999995
No 89
>PHA02239 putative protein phosphatase
Probab=82.29 E-value=1.5 Score=47.37 Aligned_cols=19 Identities=11% Similarity=0.146 Sum_probs=13.5
Q ss_pred ccEEEEcccccCCCCChhh
Q 001992 423 GDVLLIGGDLAYPNPSAFT 441 (985)
Q Consensus 423 gdfLIlgGDlvYP~gs~e~ 441 (985)
.|.|+++||++--++...+
T Consensus 30 ~d~li~lGD~iDrG~~s~~ 48 (235)
T PHA02239 30 EETIVFLGDYVDRGKRSKD 48 (235)
T ss_pred CCEEEEecCcCCCCCChHH
Confidence 4889999997765554433
No 90
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=82.03 E-value=3.4 Score=49.27 Aligned_cols=46 Identities=20% Similarity=0.290 Sum_probs=31.8
Q ss_pred CceEEEEEecc-CCCCCC-chHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCCh
Q 001992 380 EDLWFDFMADT-GDGGNS-SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 380 ~~lwFd~VADt-GDG~dS-tYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~ 439 (985)
..+-|...||+ |+|+.. -|+..+-|++.. +||+||.||-+|-.|-.
T Consensus 138 ~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~--------------~D~viH~GDyIYeyg~~ 185 (522)
T COG3540 138 RAIRFVWFADASCQGWEIGYMTAYKTMAKEE--------------PDFVIHLGDYIYEYGPI 185 (522)
T ss_pred CcchhhhhhhccccccccchhHHHHHHHhcC--------------CCEEEEcCCeeeccCCc
Confidence 45666677777 566554 446666676632 49999999999987543
No 91
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=80.62 E-value=2.3 Score=44.02 Aligned_cols=17 Identities=29% Similarity=0.434 Sum_probs=12.8
Q ss_pred CccEEEEcccccCCCCC
Q 001992 422 RGDVLLIGGDLAYPNPS 438 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs 438 (985)
..|.+|++||++--++.
T Consensus 24 ~~d~li~lGD~vdrg~~ 40 (225)
T cd00144 24 PNDKLIFLGDYVDRGPD 40 (225)
T ss_pred CCCEEEEECCEeCCCCC
Confidence 45889999997765543
No 92
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=79.15 E-value=1.8 Score=46.58 Aligned_cols=16 Identities=31% Similarity=0.356 Sum_probs=12.6
Q ss_pred CccEEEEcccccCCCC
Q 001992 422 RGDVLLIGGDLAYPNP 437 (985)
Q Consensus 422 RgdfLIlgGDlvYP~g 437 (985)
.+|.+++.||+.....
T Consensus 58 ~~d~vIi~GDl~h~~~ 73 (225)
T TIGR00024 58 GIEALIINGDLKHEFK 73 (225)
T ss_pred CCCEEEEcCccccccC
Confidence 4688999999986544
No 93
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=79.02 E-value=24 Score=44.80 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=27.5
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCc
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~ 615 (985)
-|-||+++|.-.-... .. ....+....++++ ..|+++|+||.|+.-
T Consensus 245 aDvIIaLsH~G~~~d~-~~--~~~ena~~~l~~v--~gID~IlgGHsH~~~ 290 (780)
T PRK09418 245 ADVIVALAHSGVDKSG-YN--VGMENASYYLTEV--PGVDAVLMGHSHTEV 290 (780)
T ss_pred CCEEEEEeccCccccc-cc--ccchhhhHHHhcC--CCCCEEEECCCCCcc
Confidence 4788889988764321 11 1112222233443 469999999999764
No 94
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=77.29 E-value=25 Score=43.60 Aligned_cols=45 Identities=18% Similarity=0.143 Sum_probs=26.5
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
-|-||+++|--.-. +.+. +...+....++++ ..++++|+||.|..
T Consensus 219 aDvII~LsH~G~~~-d~~~--~~aen~~~~l~~v--~gID~Il~GHsH~~ 263 (649)
T PRK09420 219 ADIVVAIPHSGISA-DPYK--AMAENSVYYLSEV--PGIDAIMFGHSHAV 263 (649)
T ss_pred CCEEEEEecCCcCC-CCcc--ccccchhHHHhcC--CCCCEEEeCCCCcc
Confidence 47888888886532 2111 1122222233443 46999999999975
No 95
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.70 E-value=30 Score=45.61 Aligned_cols=48 Identities=15% Similarity=0.028 Sum_probs=28.7
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCCcc
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY~R 616 (985)
-|-||+++|-..=...... ..+.....+.+++ ..++++++||.|....
T Consensus 235 aDvII~l~H~G~~~~~~~~--~~en~~~~la~~~--~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 235 ADVIVALAHSGIESEYQSS--GAEDSVYDLAEKT--KGIDAIVAGHQHGLFP 282 (1163)
T ss_pred CCEEEEEeccCcCCCCCCC--CcchHHHHHHHhC--CCCcEEEeCCCccccc
Confidence 4889999998763321110 0112222344443 4699999999997654
No 96
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=74.99 E-value=2 Score=51.03 Aligned_cols=93 Identities=20% Similarity=0.394 Sum_probs=50.3
Q ss_pred CCCceEEEEEeccCCCCCCchHHHHHhc-CcccccccCCCccccCCccEEEEccccc-----CCCCChhhhhhccccchh
Q 001992 378 EKEDLWFDFMADTGDGGNSSYSVARLLA-QPHIRVTRDDSVFTLPRGDVLLIGGDLA-----YPNPSAFTYERRLFRPFE 451 (985)
Q Consensus 378 ~d~~lwFd~VADtGDG~dStYaVA~LlA-qp~L~v~~~~~~~~lPRgdfLIlgGDlv-----YP~gs~e~Y~~Rf~~PYe 451 (985)
.++++...+++|.=-|. .++..-.-+. -.-|. +.....+|-+.++++||+| ||+...+-...--+++|+
T Consensus 222 ~~e~v~v~~isDih~GS-k~F~~~~f~~fi~wl~----g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~ 296 (481)
T COG1311 222 GDERVYVALISDIHRGS-KEFLEDEFEKFIDWLN----GPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYE 296 (481)
T ss_pred CCcceEEEEEeeeeccc-HHHHHHHHHHHHHHhc----CCcccccceEEEEEecccccccccccCcccccccccchHHHH
Confidence 46778888899985441 1111111110 00011 1111467778999999985 787654444333345565
Q ss_pred hhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCC
Q 001992 452 YALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (985)
Q Consensus 452 ~Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDW 496 (985)
.+-. .+ ++.| +-+.++++|||||-
T Consensus 297 ~~A~--------~L----~~vp---------~~I~v~i~PGnhDa 320 (481)
T COG1311 297 ELAE--------FL----DQVP---------EHIKVFIMPGNHDA 320 (481)
T ss_pred HHHH--------HH----hhCC---------CCceEEEecCCCCc
Confidence 4321 11 1112 24779999999996
No 97
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=72.36 E-value=4.7 Score=44.82 Aligned_cols=18 Identities=33% Similarity=0.529 Sum_probs=14.3
Q ss_pred CccEEEEcccccCCCCCh
Q 001992 422 RGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~ 439 (985)
..|.++++||++--++..
T Consensus 28 ~~D~li~lGDlVdrGp~s 45 (275)
T PRK00166 28 AKDTLWLVGDLVNRGPDS 45 (275)
T ss_pred CCCEEEEeCCccCCCcCH
Confidence 458899999998876654
No 98
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=71.79 E-value=2.4 Score=46.44 Aligned_cols=79 Identities=28% Similarity=0.265 Sum_probs=44.8
Q ss_pred EEEEEeccCCCCCCchH----------HHHHhcCcccccccCCCccccCCccEEEEcccccCCCCChhhhhhccccchhh
Q 001992 383 WFDFMADTGDGGNSSYS----------VARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEY 452 (985)
Q Consensus 383 wFd~VADtGDG~dStYa----------VA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~ 452 (985)
.-.++||+-=|+...++ -.++...-. +-...-+++-||+.||+--..+-....+.++++-+..
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~-------~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~ 93 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLD-------RIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLE 93 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHH-------HHHHhcCCCEEEEcCccccccCccccccHHHHHHHHH
Confidence 45789999766666552 222211110 0001224577999999776655444455555444433
Q ss_pred hcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCC
Q 001992 453 ALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (985)
Q Consensus 453 Al~~~~~~~~e~i~~~~pe~P~~~~~l~~~~gP~ifAIPGNHDW 496 (985)
++ ....+..|+||||=
T Consensus 94 ~~----------------------------~~~evi~i~GNHD~ 109 (235)
T COG1407 94 LL----------------------------DEREVIIIRGNHDN 109 (235)
T ss_pred Hh----------------------------ccCcEEEEeccCCC
Confidence 22 12259999999995
No 99
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=66.99 E-value=3.8 Score=43.54 Aligned_cols=19 Identities=32% Similarity=0.496 Sum_probs=14.8
Q ss_pred CCccEEEEcccccCCCCCh
Q 001992 421 PRGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~ 439 (985)
+..|.++.+||++.-++..
T Consensus 41 ~~~d~l~~lGD~vdrG~~~ 59 (218)
T PRK09968 41 PETDLLISVGDNIDRGPES 59 (218)
T ss_pred CCCCEEEECCCCcCCCcCH
Confidence 3458899999999876654
No 100
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=66.42 E-value=5.6 Score=42.43 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=11.7
Q ss_pred CccEEEEcccccCCCCC
Q 001992 422 RGDVLLIGGDLAYPNPS 438 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs 438 (985)
..|.+|++||++=-++.
T Consensus 33 ~~d~lvflGD~IDRGp~ 49 (222)
T cd07413 33 PERQVVFLGDLIDRGPE 49 (222)
T ss_pred CCCEEEEeCcccCCCCC
Confidence 45789999996633343
No 101
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=64.87 E-value=13 Score=40.81 Aligned_cols=21 Identities=38% Similarity=0.588 Sum_probs=18.1
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhc
Q 001992 485 PQCYIIPGNHDWFDGLNTFMRFICH 509 (985)
Q Consensus 485 P~ifAIPGNHDWyDGL~aF~R~F~~ 509 (985)
+.++.|||| .|+.+|..-|++
T Consensus 3 ~li~~IPGN----PGlv~fY~~Fl~ 23 (266)
T PF10230_consen 3 PLIVFIPGN----PGLVEFYEEFLS 23 (266)
T ss_pred EEEEEECCC----CChHHHHHHHHH
Confidence 469999999 999999998864
No 102
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=62.26 E-value=62 Score=39.76 Aligned_cols=52 Identities=31% Similarity=0.409 Sum_probs=33.0
Q ss_pred CCceEEEEEeccCC---------CCCCchHHHHHh--cCcccccccCCCccccCCccEEEEcccccCCC-CChhhhh
Q 001992 379 KEDLWFDFMADTGD---------GGNSSYSVARLL--AQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN-PSAFTYE 443 (985)
Q Consensus 379 d~~lwFd~VADtGD---------G~dStYaVA~Ll--Aqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~-gs~e~Y~ 443 (985)
++.+.+-+-.|.-= |.||--+-..+| ||.. +-|++++|||+..-+ ||.+...
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~-------------~VDmiLlGGDLFHeNkPSr~~L~ 74 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEN-------------DVDMILLGGDLFHENKPSRKTLH 74 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhc-------------CCcEEEecCcccccCCccHHHHH
Confidence 56778888888722 334444444443 3332 349999999998766 7765543
No 103
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=60.03 E-value=8.1 Score=42.62 Aligned_cols=19 Identities=37% Similarity=0.599 Sum_probs=14.5
Q ss_pred CCccEEEEcccccCCCCCh
Q 001992 421 PRGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~ 439 (985)
|..|.|+++||++--++..
T Consensus 25 ~~~D~Li~lGDlVdRGp~s 43 (257)
T cd07422 25 PAKDRLWLVGDLVNRGPDS 43 (257)
T ss_pred CCCCEEEEecCcCCCCcCH
Confidence 3458899999988766654
No 104
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=58.19 E-value=53 Score=40.60 Aligned_cols=127 Identities=19% Similarity=0.241 Sum_probs=74.0
Q ss_pred cccCCCCcEEEeCCCCCCCCC----hhH--HHHHhhcccc------CC--ccccCCCcceEEEECCCcEEEEEEecCC--
Q 001992 479 LKQYDGPQCYIIPGNHDWFDG----LNT--FMRFICHKSW------LG--GWFMPQKKSYFALQLPKGWWVFGLDLAL-- 542 (985)
Q Consensus 479 l~~~~gP~ifAIPGNHDWyDG----L~a--F~R~F~~r~~------lg--GW~mpQ~~SYFAlrLP~~wWLlGLDsql-- 542 (985)
+.+|+.+ ..|||+.|.+ ++. |...+..+-. .. +=..|--.+|+.+-.|++..+..+..-.
T Consensus 120 ~~~yD~l----~lGNHEl~~~~ve~l~~~~f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~ 195 (602)
T KOG4419|consen 120 MMPYDIL----TLGNHELYQANVENLTEEYFLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVGFLCAS 195 (602)
T ss_pred cCccchh----hhcchhhhhhhhhccchhhhhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEEEeecc
Confidence 3445556 7899999876 222 4433322211 11 1122333468889899987666554321
Q ss_pred ---C-CCC-C-----HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeE-EEcCcc
Q 001992 543 ---H-CDI-D-----VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKL-RIAGDM 611 (985)
Q Consensus 543 ---~-gdI-D-----~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L-~LSGHi 611 (985)
+ .+. + -.|.+|..+.++. ..-+-+|++.|-|.=.. ...+++-.++++..+ .+++ ++.||.
T Consensus 196 f~~~~n~~~v~~veei~~~~~~~~m~~~--~~idlii~lgH~~~~~~------~e~~~~~~~ir~~~p-~t~IqviGGHs 266 (602)
T KOG4419|consen 196 FSGAANRTVVVPVEEITQSEWEQDMVNT--TDIDLIIALGHSPVRDD------DEWKSLHAEIRKVHP-NTPIQVIGGHS 266 (602)
T ss_pred ccccCCCcccccHHHHhccchHHHHhhc--cCccEEEEecccccccc------hhhhhHHHHHhhhCC-CCceEEECchh
Confidence 1 111 1 2588999998863 55678888888886322 123444445565543 3555 999999
Q ss_pred C--CCccee
Q 001992 612 H--HYMRHS 618 (985)
Q Consensus 612 H--hY~R~~ 618 (985)
| .|.++.
T Consensus 267 hird~a~~d 275 (602)
T KOG4419|consen 267 HIRDFAVYD 275 (602)
T ss_pred hhhhhhhcC
Confidence 9 677763
No 105
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=54.16 E-value=99 Score=39.79 Aligned_cols=45 Identities=24% Similarity=0.265 Sum_probs=25.6
Q ss_pred CCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
-|-||+++|.-.- .+... ....+....+.++ ..|+++++||.|..
T Consensus 310 aDvIIaLsH~G~~-~d~~~--~~~En~~~~LA~v--~GIDaIvgGHsH~~ 354 (814)
T PRK11907 310 ADIVLVLSHSGIG-DDQYE--VGEENVGYQIASL--SGVDAVVTGHSHAE 354 (814)
T ss_pred CCEEEEEeCCCcc-ccccc--ccccchhhHHhcC--CCCCEEEECCCCCc
Confidence 4778888887643 22211 1112222223332 46999999999974
No 106
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=54.13 E-value=8.1 Score=40.92 Aligned_cols=43 Identities=26% Similarity=0.266 Sum_probs=25.2
Q ss_pred EEEEEecc-CCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCCh
Q 001992 383 WFDFMADT-GDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 383 wFd~VADt-GDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~ 439 (985)
.+.+|+|. |.- .+..+++++-. . .++.|-|+++||++=-++..
T Consensus 18 ri~vigDIHG~~----~~L~~lL~~i~--~--------~~~~D~li~lGDlvDrGp~s 61 (218)
T PRK11439 18 HIWLVGDIHGCF----EQLMRKLRHCR--F--------DPWRDLLISVGDLIDRGPQS 61 (218)
T ss_pred eEEEEEcccCCH----HHHHHHHHhcC--C--------CcccCEEEEcCcccCCCcCH
Confidence 56889999 322 22333443311 1 13458899999988555544
No 107
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=53.64 E-value=10 Score=41.09 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=26.6
Q ss_pred EEEEeccCCCCCCchHHHHHhcCcccccccCCCccccCCccEEEEcccccCCCCCh
Q 001992 384 FDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 384 Fd~VADtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~ 439 (985)
+.+|||.= |. -.+..+++.+-..+.. ++....|..|.+|++||++=-++..
T Consensus 3 ~~vIGDIH-G~--~~~L~~lL~~~~~~~~--~~~~~~~~~d~li~lGDliDRGp~S 53 (245)
T PRK13625 3 YDIIGDIH-GC--YQEFQALTEKLGYNWS--SGLPVHPDQRKLAFVGDLTDRGPHS 53 (245)
T ss_pred eEEEEECc-cC--HHHHHHHHHHcCCCcc--cCcccCCCCCEEEEECcccCCCcCh
Confidence 67899992 21 1234455543221110 0001125568899999977655543
No 108
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=52.85 E-value=11 Score=40.29 Aligned_cols=18 Identities=28% Similarity=0.451 Sum_probs=14.0
Q ss_pred CccEEEEcccccCCCCCh
Q 001992 422 RGDVLLIGGDLAYPNPSA 439 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~ 439 (985)
..|.+|.+||++--++..
T Consensus 37 ~~d~lv~lGDlIDrG~~s 54 (234)
T cd07423 37 EGRRAVFVGDLVDRGPDS 54 (234)
T ss_pred CCCEEEEECCccCCCCCH
Confidence 468899999988766544
No 109
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=51.78 E-value=2.4e+02 Score=30.47 Aligned_cols=133 Identities=13% Similarity=0.096 Sum_probs=72.6
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHh---hccc--cCC-ccccCCCcceEEEECCCc-EEEEEEecCCCCC----------
Q 001992 483 DGPQCYIIPGNHDWFDGLNTFMRFI---CHKS--WLG-GWFMPQKKSYFALQLPKG-WWVFGLDLALHCD---------- 545 (985)
Q Consensus 483 ~gP~ifAIPGNHDWyDGL~aF~R~F---~~r~--~lg-GW~mpQ~~SYFAlrLP~~-wWLlGLDsql~gd---------- 545 (985)
-+..+..+--||-+=-|.+++.+.. .+.. +.| |....+.+.+..++.+.. .-+++.-....+.
T Consensus 74 ~G~d~vslANNH~~D~G~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~~ 153 (250)
T PF09587_consen 74 AGFDVVSLANNHIFDYGEEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPYG 153 (250)
T ss_pred cCCCEEEecCCCCccccHHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCcccccccccc
Confidence 5677899999996544555555533 2221 233 233333334455666432 3344443322110
Q ss_pred -----------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccCcchhhHHHHHhhhCCceeEEEcCccCCC
Q 001992 546 -----------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (985)
Q Consensus 546 -----------ID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~~~~~l~~lle~~L~~RV~L~LSGHiHhY 614 (985)
..+++.+.+.+.+++..+..|-||++.|- ..... ..+ ....+.+.++++...+++++++|.|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~i~~~i~~~r~~~D~vIv~~Hw-G~e~~---~~p-~~~q~~~a~~lidaGaDiIiG~HpHv~ 228 (250)
T PF09587_consen 154 FSYRPDKAGLNPNRPGIERIKEDIREARKKADVVIVSLHW-GIEYE---NYP-TPEQRELARALIDAGADIIIGHHPHVI 228 (250)
T ss_pred ccccccccccccccchHHHHHHHHHHHhcCCCEEEEEecc-CCCCC---CCC-CHHHHHHHHHHHHcCCCEEEeCCCCcc
Confidence 01233466666665434557889999886 22111 112 222334555555557999999999988
Q ss_pred cceeec
Q 001992 615 MRHSYV 620 (985)
Q Consensus 615 ~R~~~~ 620 (985)
|.++..
T Consensus 229 q~~E~y 234 (250)
T PF09587_consen 229 QPVEIY 234 (250)
T ss_pred cceEEE
Confidence 888755
No 110
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=46.16 E-value=26 Score=38.94 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=31.3
Q ss_pred EEEEEeccCCCCCCchHHHHHhcCcccccccCC--CccccCCccEEEEcccccCCCCC
Q 001992 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDD--SVFTLPRGDVLLIGGDLAYPNPS 438 (985)
Q Consensus 383 wFd~VADtGDG~dStYaVA~LlAqp~L~v~~~~--~~~~lPRgdfLIlgGDlvYP~gs 438 (985)
++.+|+|++=|.+.....+-.+-+..|+-..++ +.....+=.-||++||.+=+.+.
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~ 58 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQ 58 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCccccccc
Confidence 367899998776655555544444444321111 10112233459999999887654
No 111
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=44.16 E-value=25 Score=40.09 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=15.3
Q ss_pred CccEEEEcccccCCCCChhhhhhcc
Q 001992 422 RGDVLLIGGDLAYPNPSAFTYERRL 446 (985)
Q Consensus 422 RgdfLIlgGDlvYP~gs~e~Y~~Rf 446 (985)
..+.+|.+||.+=-++...+..+.+
T Consensus 34 ~~~~iVfLGDyVDRGPdS~eVld~L 58 (304)
T cd07421 34 ASALVIFLGDYCDRGPETRKVIDFL 58 (304)
T ss_pred CCcEEEEeCCcCCCCCCHHHHHHHH
Confidence 4568999999665555443443333
No 112
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=37.15 E-value=42 Score=37.35 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=57.1
Q ss_pred CCCCcchhHHHHHhhheeeEEecCcHHHHHHHhccccchhhH-HHHHHHHHHhhcCccccCccCCCccchhHHHHHHHHH
Q 001992 29 YPHEHSRHAIIAVVVGCLFFISSDNMHTLIEKLDNNIKWWSM-YACLLGFFYFFSSPFIGKTITPSYSNFSRWYIAWILV 107 (985)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (985)
+|+||++|+-+..++.+...+..=-+-..+...-.+.-|+.+ .+++.|++.|+=.=+|-.|+..+.....+...
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~----- 82 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQ----- 82 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHH-----
Confidence 799999998876655443332221222222222222224443 45566666666555666666555443333222
Q ss_pred HHHhcCccccccccccccchhHHHHHHHHHHHHHHHHH
Q 001992 108 AAVYHLPSFQSMGVDLRMNLSLFLTIFLASVLFLLVFH 145 (985)
Q Consensus 108 ~~~~h~p~~~~~g~d~r~~~s~~~~~~~~s~~~~~~~~ 145 (985)
+-.|.=|++.+-+-+|..+-|.+|+
T Consensus 83 -------------~~~R~~lAvliaivIs~pl~l~iF~ 107 (301)
T PF14362_consen 83 -------------ALPRLLLAVLIAIVISEPLELKIFE 107 (301)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357778888888999988888876
No 113
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=36.82 E-value=25 Score=39.57 Aligned_cols=21 Identities=33% Similarity=0.620 Sum_probs=15.8
Q ss_pred CCccEEEEcccccCCCCChhh
Q 001992 421 PRGDVLLIGGDLAYPNPSAFT 441 (985)
Q Consensus 421 PRgdfLIlgGDlvYP~gs~e~ 441 (985)
|..|-++++||++--++...+
T Consensus 27 ~~~D~l~~lGDlVdRGP~sle 47 (279)
T TIGR00668 27 PGQDTLWLTGDLVARGPGSLE 47 (279)
T ss_pred CCCCEEEEeCCccCCCCCHHH
Confidence 345789999999988876533
No 114
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=28.95 E-value=1.8e+02 Score=31.44 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=42.0
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhhccc----cCCccccCCCcceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHH
Q 001992 483 DGPQCYIIPGNHDWFDGLNTFMRFICHKS----WLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELV 558 (985)
Q Consensus 483 ~gP~ifAIPGNHDWyDGL~aF~R~F~~r~----~lgGW~mpQ~~SYFAlrLP~~wWLlGLDsql~gdID~~Q~~wF~~ll 558 (985)
.++++.-||||.==|. +.|-+.... +... .+..-.||+++++.. +-+++ +..=..|.+|+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~----q~rsl~~~~~~~~~~~~--~~~~~d~ft~df~~~--~s~~~----g~~l~~q~~~~~~~i 70 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK----QVRSLASELQRKALLND--NSSHFDFFTVDFNEE--LSAFH----GRTLQRQAEFLAEAI 70 (225)
T ss_pred CCCEEEEECcCCCCHh----HHHHHHHHHhhhhhhcc--CccceeEEEeccCcc--ccccc----cccHHHHHHHHHHHH
Confidence 4677999999854333 233222111 1111 112234677766653 22222 222246788887765
Q ss_pred Hh---h----cCCCCeEEEEecC
Q 001992 559 KE---Q----VGERDSVIIMTHE 574 (985)
Q Consensus 559 ~~---~----v~~~d~VIL~tHe 574 (985)
+. . ..+.++||+++|.
T Consensus 71 ~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 71 KYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred HHHHHhhhhccCCCCceEEEEEc
Confidence 41 1 2467899999984
No 115
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.26 E-value=1.3e+02 Score=38.76 Aligned_cols=85 Identities=26% Similarity=0.439 Sum_probs=46.1
Q ss_pred ccCCCCcEEEeCCCCCCCCChhHHHHHh---hccccCCccc-------cCCCcceEEEECCCcEEEEEEecCCCCCCCHH
Q 001992 480 KQYDGPQCYIIPGNHDWFDGLNTFMRFI---CHKSWLGGWF-------MPQKKSYFALQLPKGWWVFGLDLALHCDIDVY 549 (985)
Q Consensus 480 ~~~~gP~ifAIPGNHDWyDGL~aF~R~F---~~r~~lgGW~-------mpQ~~SYFAlrLP~~wWLlGLDsql~gdID~~ 549 (985)
.+..|.++.-||||--=| .+.|-+ |++.+.+|-. .|.+-.+|++++... + +..+|.+=..
T Consensus 85 lelsGIPVLFIPGNAGSy----KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~----tAm~G~~l~d 154 (973)
T KOG3724|consen 85 LELSGIPVLFIPGNAGSY----KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F----TAMHGHILLD 154 (973)
T ss_pred ccCCCceEEEecCCCCch----HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h----hhhccHhHHH
Confidence 345788999999995433 445544 3333333321 122212344443332 1 1234666689
Q ss_pred HHHHHHHHHH---hhcC--CC------CeEEEEecC
Q 001992 550 QFKFFAELVK---EQVG--ER------DSVIIMTHE 574 (985)
Q Consensus 550 Q~~wF~~ll~---~~v~--~~------d~VIL~tHe 574 (985)
|-||.-+..+ .... ++ ..||++.|.
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHS 190 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHS 190 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEecc
Confidence 9999988764 1111 22 349999984
No 116
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=26.43 E-value=1.2e+02 Score=31.36 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=25.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 535 LlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
++.|| .....+|...++.+.+.+.+....+..+|+++|++.
T Consensus 146 llllD-EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~ 186 (201)
T cd03231 146 LWILD-EPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL 186 (201)
T ss_pred EEEEe-CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch
Confidence 56666 344566777777777766533334556777777765
No 117
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=23.57 E-value=1.5e+02 Score=30.56 Aligned_cols=41 Identities=15% Similarity=0.244 Sum_probs=29.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 535 LlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
++.+|- ....+|...++.+.+.+++..+.+..+|++||++.
T Consensus 129 vlllDE-P~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~ 169 (192)
T cd03232 129 ILFLDE-PTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPS 169 (192)
T ss_pred EEEEeC-CCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCCh
Confidence 677774 45677888888888877643334678899999875
No 118
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=23.30 E-value=1.3e+02 Score=31.19 Aligned_cols=41 Identities=20% Similarity=0.201 Sum_probs=25.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 535 LlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
++-|| .....+|...++.+.+.+++..+.+..+|++||++.
T Consensus 158 lllLD-EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~ 198 (214)
T TIGR02673 158 LLLAD-EPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS 198 (214)
T ss_pred EEEEe-CCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 55666 344566776677777766542233556777777765
No 119
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=22.03 E-value=1.7e+02 Score=30.18 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=26.4
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 535 LlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
++-||- ....+|..-.+.+.+.+.+..+.+..+|+++|+|.
T Consensus 148 llllDE-Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 148 LWILDE-PTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred EEEEeC-CCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 667774 44566766677777766542334567888888774
No 120
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=21.01 E-value=1.7e+02 Score=30.72 Aligned_cols=44 Identities=11% Similarity=0.201 Sum_probs=29.5
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcc
Q 001992 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLL 579 (985)
Q Consensus 535 LlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~w~~ 579 (985)
++.||- ....+|....+.+.+.+.+..+.+..+|+++|++....
T Consensus 158 llllDE-Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~ 201 (214)
T PRK13543 158 LWLLDE-PYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAP 201 (214)
T ss_pred EEEEeC-CcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhh
Confidence 666774 44567777777777777543344567888888876544
No 121
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=20.52 E-value=1.7e+02 Score=29.79 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=26.1
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001992 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (985)
Q Consensus 535 LlGLDsql~gdID~~Q~~wF~~ll~~~v~~~d~VIL~tHeP~ 576 (985)
++.||- ....+|....+.+.+++.+....+..||+++|.+.
T Consensus 148 llllDE-Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 148 VLLLDE-PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred EEEEcC-CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 667773 44566777677777766533233567788888764
No 122
>PF07717 OB_NTP_bind: Oligonucleotide/oligosaccharide-binding (OB)-fold; InterPro: IPR011709 This domain is found towards the C terminus of the DEAD-box helicases (IPR011545 from INTERPRO). In these helicases it appears to be always found in association with IPR007502 from INTERPRO. ; PDB: 3I4U_A 2XAU_B 3KX2_B.
Probab=20.17 E-value=40 Score=31.82 Aligned_cols=32 Identities=25% Similarity=0.547 Sum_probs=24.3
Q ss_pred cceeeeeccccCCCCCCCCccchHHHHHHHHH
Q 001992 250 SKWVIYGELGNDNGGSSDEISPIYSLWATFIG 281 (985)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 281 (985)
++|++|+|+++.+...--.+++|-..|+..++
T Consensus 80 p~~vvy~e~~~t~k~y~~~~t~I~~~wl~~~~ 111 (114)
T PF07717_consen 80 PKWVVYHELVRTSKPYMRDVTAISPEWLLLFA 111 (114)
T ss_dssp -SEEEEEEEEESSSEEEEEEEE--HHHHHHH-
T ss_pred cccchhhhheecCCcEEEECcCCCHHHHHHHc
Confidence 46999999999887777788999999987654
No 123
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=20.11 E-value=58 Score=25.62 Aligned_cols=10 Identities=60% Similarity=1.438 Sum_probs=7.8
Q ss_pred HHHHHHHHHH
Q 001992 99 RWYIAWILVA 108 (985)
Q Consensus 99 ~~~~~~~~~~ 108 (985)
+||.+||+..
T Consensus 1 MWYfaWilG~ 10 (30)
T TIGR02106 1 MWYFAWILGT 10 (30)
T ss_pred ChhHHHHHHH
Confidence 5899998754
Done!