Citrus Sinensis ID: 001993

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-----

MAEAIVSTILEQLALILVEQTAAGVRLIAGAEEEVENLHRRFHLIKAVVEDAEKRQMKETAVRVWLDDLKHASYDMEDVLDEWNTAIRKLQMKRSSGDANVSQPMRTVRPSFIIPSYWFSPGQLVQRHNIATKIKNVDKKLDNIVRDINAYGFIISREQGSGKVASRPSTTSFLDESYEIRGRNHLQNKVASLLMSGSESSTASAASSSQVPTQRPTIISITGMGGIGKTTLAKLIFNDNEVRNHFNEKIWVCVSEPFDDIRIAKAILESLKGSATNAVESETVLKQLRESIEGKKFFLVLDDVWTEEPQNWEQLLGCLRCGSKESRILVTTRNEKVAIAIGTTKFNIIPIELLSDEDCWSIFSQLALSRRLDIEESENFENIGRQIVSKCKGLPLAVKTLGSLLRFKGKIEEWQRVLENELWELEELDEGLLGPLLLSYLDLPPPLKKCFSYCAIFPKDSRLEKDKLIRLWMAQDYLKVKGREDMVVGEGYFENLAMRSLFQDFERSEHDGGKIISCQMHDMVHDFSQFLTKTECSALDVNKSRLQLPSWKARHLMITGETRSEMVPFPSMVYDETKLRSLVLDQRLSFKPRIALSKLFDRLTCLRSIDGLPVGQIPKGIKKLIHLRYLALGENPWIKELPEALCELCNLQTLDVSLCHYLKRLPERIGQLINLRHLMNSKEEWSRLSYMPRGMERLTGLRTLGAFVASGGKSSKACSSLKSLNKLKHLEGSLTLRGLGNERDLGDDNDDEKVDLKSKMKLVDLHLRFDSTTKTKDHRVVLECLQPPSSLEKLGIYGYAGDTISPTSDWMLSLAKLRVLTLRFCNECECLPPLGKLPCLETLVLEGMSSVKRLGNGFLGIAEDHQARADQAETASSIIRDTAFPRLETLEFLDMEKWEEWDDCEIAGGKTIMPRLRHLSICWSPELKALPDYILGSTSLDKLLIYYSRHLNNRYNMETGPEWPKISHVPNISFTLHGPAAQGSL

cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEccHHHHHHHHHHHHcccccccccccccccccccccEEEEEEccccccHHHHHHHHHHcccHHHcccccEEEEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccEEEEEEcccccccHHcHHHHHHHHcccccccEEEEEcccHHHHHHHccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccHHHHccccccccccHHHHHccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccccccCEEEEEcHHHHHHHHHHHcccEEEEEcccccccccccccEEEEEEccccccccccccccccccccEEEEEcccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccHHHHccccccEEEcccccccccccccccccccccccccccEEECccccccccccccccccccccccCEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccEEEEcccccccccccccccccccccccccEEEEccccccccccccccccccccEEEEEcccccccccccccccccccccccccEEEccccccccccc

MAEAIVSTILEQLALILVEQTAAGVRLIAGAEEEVENLHRRFHLIKAVVEDAEKRQMKETAVRVWLDDLKHASYDMEDVLDEWNTAIRKL*****************VRPSFIIPSYWFSPGQLVQRHNIATKIKNVDKKLDNIVRDINAYGFIIS*********************YEIRGRNHLQNKVASLLMSGSE**********QVPTQRPTIISITGMGGIGKTTLAKLIFNDNEVRNHFNEKIWVCVSEPFDDIRIAKAILESLKGSATNAVESETVLKQLRESIEGKKFFLVLDDVWTEEPQNWEQLLGCLRCGSKESRILVTTRNEKVAIAIGTTKFNIIPIELLSDEDCWSIFSQLALSRRLDIEESENFENIGRQIVSKCKGLPLAVKTLGSLLRFKGKIEEWQRVLENELWELEELDEGLLGPLLLSYLDLPPPLKKCFSYCAIFPKDSRLEKDKLIRLWMAQDYLKVKGREDMVVGEGYFENLAMRSLFQDFERSEHDGGKIISCQMHDMVHDFSQFLTKTECSALDVNKSRLQLPSWKARHLMITGETRSEMVPFPSMVYDETKLRSLVLDQRLSFKPRIALSKLFDRLTCLRSIDGLPVGQIPKGIKKLIHLRYLALGENPWIKELPEALCELCNLQTLDVSLCHYLKRLPERIGQLINLRHLMNSKEEWSRLSYMPRGMERLTGLRTLGAFVASGGKSSKACSSLKSLNKLKHLEGSLTLRGLGNERDLGDDNDDEKVDLKSKMKLVDLHLRFDSTTKTKDHRVVLECLQPPSSLEKLGIYGYAGDTISPTSDWMLSLAKLRVLTLRFCNECECLPPLGKLPCLETLVLEGMSSVKRLGNGFLGIAEDHQAR********SIIRDTAFPRLETLEFLDMEKWEEWDDCEIAGGKTIMPRLRHLSICWSPELKALPDYILGSTSLDKLLIYYSRHLNNRYNMETGPEWPKISHVPNISFTLH********

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MAEAIVSTILEQLALILVEQTAAGVRLIAGAEEEVENLHRRFHLIKAVVEDAEKRQMKETAVRVWLDDLKHASYDMEDVLDEWNTAIRKLQMKRSSGDANVSQPMRTVRPSFIIPSYWFSPGQLVQRHNIATKIKNVDKKLDNIVRDINAYGFIISREQGSGKVASRPSTTSFLDESYEIRGRNHLQNKVASLLMSGSESSTASAASSSQVPTQRPTIISITGMGGIGKTTLAKLIFNDNEVRNHFNEKIWVCVSEPFDDIRIAKAILESLKGSATNAVESETVLKQLRESIEGKKFFLVLDDVWTEEPQNWEQLLGCLRCGSKESRILVTTRNEKVAIAIGTTKFNIIPIELLSDEDCWSIFSQLALSRRLDIEESENFENIGRQIVSKCKGLPLAVKTLGSLLRFKGKxxxxxxxxxxxxxxxxxxxxxLLGPLLLSYLDLPPPLKKCFSYCAIFPKDSRLEKDKLIRLWMAQDYLKVKGREDMVVGEGYFENLAMRSLFQDFERSEHDGGKIISCQMHDMVHDFSQFLTKTECSALDVNKSRLQLPSWKARHLMITGETRSEMVPFPSMVYDETKLRSLVLDQRLSFKPRIALSKLFDRLTCLRSIDGLPVGQIPKGIKKLIHLRYLALGENPWIKELPEALCELCNLQTLDVSLCHYLKRLPERIGQLINLRHLMNSKEEWSRLSYMPRGMERLTGLRTLGAFVASGGKSSKACSSLKSLNKLKHLEGSLTLRGLGNERDLGDDNDDEKVDLKSKMKLVDLHLRFDSTTKTKDHRVVLECLQPPSSLEKLGIYGYAGDTISPTSDWMLSLAKLRVLTLRFCNECECLPPLGKLPCLETLVLEGMSSVKRLGNGFLGIAEDHQARADQAETASSIIRDTAFPRLETLEFLDMEKWEEWDDCEIAGGKTIMPRLRHLSICWSPELKALPDYILGSTSLDKLLIYYSRHLNNRYNMETGPEWPKISHVPNISFTLHGPAAQGSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Putative disease resistance RPP13-like protein 1	Potential disease resistance protein.	probable	Q9LRR4

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ECN, chain A
Confidence level:very confident
Coverage over the Query: 551-951
View the alignment between query and template
View the model in PyMOL

Template: 1Z6T, chain A
Confidence level:very confident
Coverage over the Query: 179-198,214-475,486-532
View the alignment between query and template
View the model in PyMOL

Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 551-959
View the alignment between query and template
View the model in PyMOL

Template: 2A5Y, chain B
Confidence level:very confident
Coverage over the Query: 179-198,213-537
View the alignment between query and template
View the model in PyMOL

Template: 3QFL, chain A
Confidence level:confident
Coverage over the Query: 4-88
View the alignment between query and template
View the model in PyMOL

Template: 1SXJ, chain A
Confidence level:probable
Coverage over the Query: 179-402
View the alignment between query and template
View the model in PyMOL