Query 002002
Match_columns 983
No_of_seqs 528 out of 3968
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:14:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002002.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002002hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.2E-28 4.2E-33 269.5 28.9 225 427-703 19-273 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 6.1E-28 2.1E-32 264.0 26.9 232 5-380 17-273 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 1.8E-28 6.1E-33 269.4 17.4 226 427-703 20-276 (296)
4 1dqv_A Synaptotagmin III; beta 99.9 2E-27 6.9E-32 261.0 18.5 215 5-361 18-249 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 1.2E-19 4E-24 174.1 13.0 123 585-722 10-132 (133)
6 2dmh_A Myoferlin; beta-sandwic 99.8 1.4E-18 4.7E-23 168.2 18.9 128 5-136 5-135 (140)
7 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-18 3.9E-23 170.5 18.3 122 5-133 15-146 (148)
8 1wfj_A Putative elicitor-respo 99.8 8.9E-19 3E-23 168.6 15.8 125 4-136 7-132 (136)
9 3kwu_A MUNC13-1; calcium bindi 99.8 2.6E-18 9E-23 167.9 18.6 121 586-721 15-146 (148)
10 2ep6_A MCTP2 protein; beta san 99.8 4.3E-19 1.5E-23 170.1 12.5 123 4-134 10-132 (133)
11 3m7f_B E3 ubiquitin-protein li 99.8 1.2E-18 4E-23 175.6 16.1 129 2-135 3-142 (176)
12 2fk9_A Protein kinase C, ETA t 99.8 1.1E-18 3.9E-23 170.1 14.8 116 5-133 27-156 (157)
13 1wfj_A Putative elicitor-respo 99.8 1E-18 3.5E-23 168.2 14.2 123 585-723 7-131 (136)
14 3b7y_A E3 ubiquitin-protein li 99.8 1.6E-18 5.4E-23 170.5 15.1 125 4-133 17-152 (153)
15 2dmh_A Myoferlin; beta-sandwic 99.8 3.3E-18 1.1E-22 165.5 16.5 124 586-722 5-133 (140)
16 2fk9_A Protein kinase C, ETA t 99.8 1.5E-18 5E-23 169.4 13.8 119 585-721 26-156 (157)
17 3b7y_A E3 ubiquitin-protein li 99.8 3.5E-18 1.2E-22 168.0 14.8 124 585-721 17-152 (153)
18 3pyc_A E3 ubiquitin-protein li 99.8 7.3E-18 2.5E-22 161.3 14.7 122 6-132 4-131 (132)
19 3m7f_B E3 ubiquitin-protein li 99.8 1.1E-17 3.8E-22 168.5 16.2 125 585-722 5-141 (176)
20 1rlw_A Phospholipase A2, CALB 99.7 7.8E-18 2.7E-22 159.7 12.9 118 587-720 2-123 (126)
21 1gmi_A Protein kinase C, epsil 99.7 1.3E-17 4.4E-22 160.4 13.5 116 6-134 5-133 (136)
22 1gmi_A Protein kinase C, epsil 99.7 1.7E-17 5.8E-22 159.6 13.5 120 586-722 4-133 (136)
23 2nq3_A Itchy homolog E3 ubiqui 99.7 3.8E-17 1.3E-21 163.2 15.8 125 5-135 34-162 (173)
24 1rlw_A Phospholipase A2, CALB 99.7 7.2E-17 2.5E-21 153.0 14.2 115 6-131 2-122 (126)
25 3pyc_A E3 ubiquitin-protein li 99.7 7.7E-17 2.6E-21 154.1 13.9 124 587-720 4-131 (132)
26 2nq3_A Itchy homolog E3 ubiqui 99.7 1.3E-16 4.5E-21 159.3 14.8 123 585-721 33-160 (173)
27 2b3r_A Phosphatidylinositol-4- 99.7 1.1E-16 3.8E-21 153.3 12.7 108 6-117 19-132 (134)
28 2z0u_A WW domain-containing pr 99.7 1.3E-16 4.4E-21 156.4 13.0 104 586-701 41-154 (155)
29 1rsy_A Synaptotagmin I; calciu 99.7 2.2E-16 7.5E-21 154.9 14.5 105 586-702 40-150 (152)
30 2d8k_A Synaptotagmin VII; exoc 99.7 9.9E-17 3.4E-21 155.3 11.9 112 5-118 24-138 (141)
31 2d8k_A Synaptotagmin VII; exoc 99.7 4.5E-16 1.5E-20 150.6 15.7 106 586-703 24-136 (141)
32 2bwq_A Regulating synaptic mem 99.7 1.5E-16 5E-21 151.5 12.0 107 5-114 16-129 (129)
33 2z0u_A WW domain-containing pr 99.7 4.4E-17 1.5E-21 159.8 8.4 108 5-114 41-154 (155)
34 3fdw_A Synaptotagmin-like prot 99.7 1.1E-16 3.7E-21 156.3 10.7 108 586-704 21-136 (148)
35 3f04_A Synaptotagmin-1; C2A, c 99.7 2.5E-16 8.5E-21 152.8 13.0 105 586-702 32-142 (143)
36 2bwq_A Regulating synaptic mem 99.7 3.5E-16 1.2E-20 148.9 13.3 103 586-701 16-129 (129)
37 2b3r_A Phosphatidylinositol-4- 99.7 4.7E-16 1.6E-20 148.9 13.1 104 587-703 19-131 (134)
38 3fdw_A Synaptotagmin-like prot 99.7 1.7E-16 5.9E-21 154.9 10.0 112 5-119 21-138 (148)
39 3fbk_A RGS3, RGP3, regulator o 99.7 4.6E-16 1.6E-20 152.7 12.7 105 586-703 25-138 (153)
40 1rsy_A Synaptotagmin I; calciu 99.7 4.7E-16 1.6E-20 152.5 12.5 109 5-116 40-151 (152)
41 3f04_A Synaptotagmin-1; C2A, c 99.7 3.4E-16 1.1E-20 151.9 11.1 108 5-115 32-142 (143)
42 1ugk_A Synaptotagmin IV, KIAA1 99.6 8.3E-16 2.9E-20 148.1 13.7 111 5-117 20-135 (138)
43 1ugk_A Synaptotagmin IV, KIAA1 99.6 1E-15 3.5E-20 147.5 14.3 105 587-703 21-134 (138)
44 1v27_A Regulating synaptic mem 99.6 3.1E-16 1.1E-20 151.8 10.6 111 5-118 19-136 (141)
45 1v27_A Regulating synaptic mem 99.6 4.5E-16 1.5E-20 150.6 11.3 105 587-704 20-135 (141)
46 1wfm_A Synaptotagmin XIII; C2 99.6 1.3E-15 4.5E-20 146.6 14.2 103 586-703 24-133 (138)
47 3rdl_A Protein kinase C alpha 99.6 8.1E-16 2.8E-20 148.0 12.3 108 5-117 14-126 (137)
48 2dmg_A KIAA1228 protein; beta- 99.6 8.1E-16 2.8E-20 149.0 12.1 107 586-703 22-136 (142)
49 1rh8_A Piccolo protein; beta-s 99.6 1.2E-16 4.2E-21 154.8 6.2 109 6-117 17-140 (142)
50 1rh8_A Piccolo protein; beta-s 99.6 2.6E-16 9E-21 152.5 8.2 104 588-703 18-139 (142)
51 2chd_A Rabphilin-3A, exophilin 99.6 1.3E-15 4.5E-20 147.5 12.7 104 587-702 28-140 (142)
52 3fbk_A RGS3, RGP3, regulator o 99.6 1.5E-15 5E-20 149.1 12.9 111 5-118 25-140 (153)
53 1wfm_A Synaptotagmin XIII; C2 99.6 2.1E-15 7.3E-20 145.2 13.6 107 5-117 24-134 (138)
54 3rdl_A Protein kinase C alpha 99.6 8.6E-16 3E-20 147.8 10.9 103 588-703 16-125 (137)
55 1tjx_A Similar to synaptotagmi 99.6 3.3E-15 1.1E-19 147.6 15.3 106 586-703 23-148 (159)
56 2q3x_A Regulating synaptic mem 99.6 8.6E-16 2.9E-20 153.7 11.2 107 6-118 29-142 (171)
57 1a25_A CALB, protein kinase C 99.6 1E-15 3.5E-20 149.6 11.4 103 588-703 31-140 (149)
58 2q3x_A Regulating synaptic mem 99.6 6.8E-16 2.3E-20 154.4 10.3 105 588-703 30-140 (171)
59 1a25_A CALB, protein kinase C 99.6 1.4E-15 4.8E-20 148.6 12.3 106 6-116 30-140 (149)
60 3n5a_A Synaptotagmin-7; calciu 99.6 2.6E-15 8.8E-20 144.7 13.9 92 586-689 14-113 (138)
61 2chd_A Rabphilin-3A, exophilin 99.6 9.6E-16 3.3E-20 148.5 10.5 109 5-116 27-141 (142)
62 2enp_A B/K protein; C2 type 1, 99.6 1.2E-15 4.2E-20 148.7 11.0 109 586-703 24-142 (147)
63 2cm5_A Rabphilin-3A; protein t 99.6 5.2E-15 1.8E-19 147.3 15.8 92 586-689 35-134 (166)
64 2dmg_A KIAA1228 protein; beta- 99.6 1.3E-15 4.3E-20 147.7 9.9 111 5-118 22-138 (142)
65 3l9b_A Otoferlin; C2-domain, b 99.6 1.1E-14 3.9E-19 135.5 15.3 122 4-134 18-140 (144)
66 2cm5_A Rabphilin-3A; protein t 99.6 4.5E-15 1.6E-19 147.8 13.7 94 5-100 35-133 (166)
67 2enp_A B/K protein; C2 type 1, 99.6 1.6E-15 5.5E-20 147.9 9.1 110 5-117 24-143 (147)
68 1tjx_A Similar to synaptotagmi 99.6 5.8E-15 2E-19 145.9 13.2 111 5-117 23-149 (159)
69 2cjt_A UNC-13 homolog A, MUNC1 99.6 5E-15 1.7E-19 140.8 11.8 117 586-720 3-130 (131)
70 3n5a_A Synaptotagmin-7; calciu 99.6 7E-15 2.4E-19 141.6 12.3 95 5-101 14-113 (138)
71 1w15_A Synaptotagmin IV; metal 99.6 1.3E-14 4.3E-19 142.5 14.0 103 586-702 28-138 (153)
72 1w15_A Synaptotagmin IV; metal 99.6 1.4E-14 4.7E-19 142.2 13.9 106 5-115 28-138 (153)
73 2cjt_A UNC-13 homolog A, MUNC1 99.6 5.6E-15 1.9E-19 140.4 10.4 87 6-103 4-91 (131)
74 3nsj_A Perforin-1; pore formin 99.5 4.9E-14 1.7E-18 164.1 15.5 115 585-725 391-507 (540)
75 3l9b_A Otoferlin; C2-domain, b 99.5 9.2E-14 3.2E-18 129.4 13.9 116 589-723 22-141 (144)
76 2cjs_A UNC-13 homolog A, MUNC1 99.5 8.9E-14 3.1E-18 137.6 14.0 118 5-133 12-140 (167)
77 2cjs_A UNC-13 homolog A, MUNC1 99.5 7E-14 2.4E-18 138.4 12.8 116 586-721 12-140 (167)
78 3jzy_A Intersectin 2; C2 domai 99.5 6.7E-14 2.3E-18 165.7 13.7 119 585-721 384-507 (510)
79 3jzy_A Intersectin 2; C2 domai 99.5 2E-13 6.7E-18 161.7 15.3 120 5-133 385-507 (510)
80 3nsj_A Perforin-1; pore formin 99.5 4.4E-13 1.5E-17 156.1 16.2 112 5-133 392-503 (540)
81 1djx_A PLC-D1, phosphoinositid 99.4 8.9E-13 3.1E-17 157.2 18.0 121 5-133 495-623 (624)
82 3bxj_A RAS GTPase-activating p 99.4 2.6E-14 9E-19 166.3 0.2 120 586-722 9-157 (483)
83 1djx_A PLC-D1, phosphoinositid 99.4 1.7E-12 5.9E-17 154.7 15.2 121 586-721 495-623 (624)
84 1cjy_A CPLA2, protein (cytosol 99.3 2E-12 6.8E-17 155.0 10.5 107 4-116 15-127 (749)
85 1cjy_A CPLA2, protein (cytosol 99.3 1.4E-12 4.8E-17 156.3 8.9 107 585-701 15-125 (749)
86 3bxj_A RAS GTPase-activating p 99.3 3.5E-13 1.2E-17 156.8 -0.2 120 6-136 10-159 (483)
87 3ohm_B 1-phosphatidylinositol- 99.1 5E-10 1.7E-14 136.4 14.5 115 7-137 725-848 (885)
88 3qr0_A Phospholipase C-beta (P 99.1 9.9E-10 3.4E-14 133.2 16.3 115 7-137 650-774 (816)
89 3pfq_A PKC-B, PKC-beta, protei 99.1 3.1E-10 1E-14 138.3 11.1 107 6-117 171-282 (674)
90 3pfq_A PKC-B, PKC-beta, protei 99.0 2.8E-10 9.5E-15 138.7 9.1 104 587-703 171-281 (674)
91 2zkm_X 1-phosphatidylinositol- 99.0 2.1E-09 7.1E-14 131.3 15.0 112 6-133 677-798 (799)
92 1yrk_A NPKC-delta, protein kin 99.0 4.9E-09 1.7E-13 94.5 13.1 111 6-133 5-124 (126)
93 2enj_A NPKC-theta, protein kin 99.0 3.6E-09 1.2E-13 96.7 12.1 116 4-136 7-132 (138)
94 3qr0_A Phospholipase C-beta (P 99.0 2.2E-09 7.6E-14 130.1 13.6 126 587-736 649-788 (816)
95 3ohm_B 1-phosphatidylinositol- 99.0 1.4E-09 4.9E-14 132.4 11.6 126 587-736 724-862 (885)
96 2zkm_X 1-phosphatidylinositol- 98.9 6.9E-09 2.3E-13 126.7 12.4 112 586-721 676-798 (799)
97 1yrk_A NPKC-delta, protein kin 98.5 8.6E-07 3E-11 80.0 12.4 108 587-721 5-124 (126)
98 2enj_A NPKC-theta, protein kin 98.4 1E-06 3.5E-11 80.6 10.8 112 586-721 8-129 (138)
99 2yrb_A Protein fantom; beta sa 85.0 1.3 4.5E-05 41.8 6.0 127 4-134 15-150 (156)
100 3l4c_A Dedicator of cytokinesi 83.4 12 0.00041 37.4 12.4 75 4-80 24-117 (220)
101 2wxf_A Phosphatidylinositol-4, 78.8 12 0.00042 46.0 13.0 73 5-80 215-293 (940)
102 2yrb_A Protein fantom; beta sa 73.6 13 0.00043 35.1 8.7 125 585-722 15-150 (156)
103 3hhm_A Phosphatidylinositol-4, 72.9 27 0.00094 43.4 13.8 95 5-101 353-456 (1091)
104 2wxf_A Phosphatidylinositol-4, 67.4 17 0.0006 44.7 10.5 93 588-687 217-323 (940)
105 1e7u_A Phosphatidylinositol 3- 66.3 40 0.0014 41.6 13.3 74 6-80 217-295 (961)
106 2y3a_A Phosphatidylinositol-4, 62.3 8.5 0.00029 48.1 6.4 73 5-80 351-429 (1092)
107 3hhm_A Phosphatidylinositol-4, 59.4 24 0.00081 44.0 9.5 84 428-523 356-455 (1091)
108 1e7u_A Phosphatidylinositol 3- 44.7 77 0.0026 39.1 10.7 94 589-687 219-329 (961)
109 2y3a_A Phosphatidylinositol-4, 44.4 18 0.0006 45.3 5.1 94 587-687 352-469 (1092)
110 3l4c_A Dedicator of cytokinesi 32.6 1.1E+02 0.0038 30.4 7.8 40 624-663 77-119 (220)
111 2kog_A Vesicle-associated memb 22.5 2.6E+02 0.0089 24.8 7.6 32 888-919 39-70 (119)
112 3j1r_A Archaeal adhesion filam 21.3 90 0.0031 19.4 2.8 18 923-940 6-23 (26)
113 3hd7_A Vesicle-associated memb 21.3 2E+02 0.0068 24.2 6.3 38 887-924 34-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.97 E-value=1.2e-28 Score=269.49 Aligned_cols=225 Identities=25% Similarity=0.292 Sum_probs=184.5
Q ss_pred EEEEEEEEEeeCCCCCCCCCCCCCCCCcEEEEEEC---CeEEEeeeeeeccCCCCCCCCcccceEEEEecCC--CCCcEE
Q 002002 427 WYLRLTVIQTQDLQPGSGSEPKVRSPELYVKGQLG---AQLFKTGRTSVGLSPSSSANPTWNEDLVFVAAEP--FEPFLV 501 (983)
Q Consensus 427 ~~L~V~Viea~~L~~~~~~~d~~~~sdpyv~v~lg---~~~~rT~~~~~~~~~~~t~nP~wne~f~f~~~~~--~~~~L~ 501 (983)
+.|+|+|++|++|+.+ |..+.+||||+++++ .++++|+++. +++||.|||.|.|.+..+ ....|.
T Consensus 19 ~~L~v~v~~a~~L~~~----d~~~~~dpyv~v~~~~~~~~~~~T~~~~------~~~nP~wne~f~f~v~~~~~~~~~l~ 88 (284)
T 2r83_A 19 NQLLVGIIQAAELPAL----DMGGTSDPYVKVFLLPDKKKKFETKVHR------KTLNPVFNEQFTFKVPYSELAGKTLV 88 (284)
T ss_dssp TEEEEEEEEEECCCCC----SSSSSCCEEEEEEEETCTTSCEECCCCC------SCSSCEEEEEEEECCCGGGCTTCEEE
T ss_pred CEEEEEEEEeeCCCCC----CCCCCCCeEEEEEEEcCCCceEeCCccc------CCCCCeeCceEEEEechHHhCcCEEE
Confidence 3599999999999987 788899999999995 3578898885 589999999999987643 357899
Q ss_pred EEEEeCc---CCceeEEEEEecccccccccCCCCCcceEEeccCCCC--CCcceEEEEEEEEeccccccccccccCCchh
Q 002002 502 VTVEDVT---NGCSVGHARIQMSTVERRIDDRAEPKSRWFNLVGDET--RPYAGRIHLRACLEGGYHVLDEAAHVTSDVR 576 (983)
Q Consensus 502 i~V~D~d---~d~~lG~~~i~L~~l~~~~~~~~~~~~~w~~L~~~~~--~~~~G~l~l~i~l~g~~~v~~~~~~~~~d~~ 576 (983)
|+|||++ ++++||++.++|.++... .....|++|....+ ....|.|.+.+...
T Consensus 89 ~~V~d~d~~~~~~~lG~~~i~l~~l~~~-----~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~----------------- 146 (284)
T 2r83_A 89 MAVYDFDRFSKHDIIGEFKVPMNTVDFG-----HVTEEWRDLQSAEKEEQEKLGDICFSLRYV----------------- 146 (284)
T ss_dssp EEEEECCSSSCCCEEEEEEEEGGGCCCS-----SCEEEEEECBCCSSCCCCCCCEEEEEEEEE-----------------
T ss_pred EEEEECCCCCCCceeEEEEEcchhcccC-----CcceeEEEeeccccccccccccEEEEEEec-----------------
Confidence 9999998 789999999999998753 35678999976532 23568887765322
Q ss_pred HHHHhhccCCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEEC--C---EEEEeeeecCCCCCeeceEEEEEEecC-
Q 002002 577 AAAKQLAKSPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG--P---KWVRTRTILDRFNPRWNEQYTWDVYDP- 650 (983)
Q Consensus 577 ~~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~--~---~~~rT~~~~~t~nP~Wne~~~~~v~~~- 650 (983)
+..|.|.|.|++|+||+++ |. .|.+||||++++. + ...+|+++++++||.|||+|.|.+...
T Consensus 147 --------p~~~~l~v~v~~a~~L~~~---d~-~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 214 (284)
T 2r83_A 147 --------PTAGKLTVVILEAKNLKKM---DV-GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ 214 (284)
T ss_dssp --------TTTTEEEEEEEEEESCCCC---ST-TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTT
T ss_pred --------CcCCceEEEEEEeECCCCc---CC-CCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHH
Confidence 2356899999999999766 55 7899999999984 2 467999999999999999999998654
Q ss_pred --CCEEEEEEEeCCCCCCcCCCCCCCCceeEEEEEEcccc------------cCCCeEEEEEEeeec
Q 002002 651 --CTVLTIGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTL------------DTNRVYLNSYSLTVL 703 (983)
Q Consensus 651 --~~~l~i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 703 (983)
...|.|+|||++.++ +|++||++.|+++.+ ..+....+||+|...
T Consensus 215 l~~~~l~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 215 IQKVQVVVTVLDYDKIG--------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp GGGEEEEEEEEECCSSS--------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred hCceEEEEEEEeCCCCC--------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 237999999999988 788999999999863 234567889998754
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.96 E-value=6.1e-28 Score=264.00 Aligned_cols=232 Identities=22% Similarity=0.338 Sum_probs=183.8
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC---eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG---QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDK 81 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~ 81 (983)
..+.|.|+|++|++|+++|..|.+||||++.++. ++++|+++++++||.|||+|.|.+... ++....|.|.|||.+
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~-~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS-ELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGG-GCTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechH-HhCcCEEEEEEEECC
Confidence 4579999999999999999999999999999953 688999999999999999999998653 344679999999988
Q ss_pred CCCCCCCccEEEEEECccceecCCeeeEEEEceecCCc-ceeeeEEEEEEEEecCCCCCCCcccccccCCCCCCCcccCC
Q 002002 82 KTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVF-SQIKGEIGLKVYYIDEDPPAPAPEAAAVAEPATKPEAAVAD 160 (983)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~-s~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (983)
.++ ++++||++.+++..+. .+.....|++|.+.... ....|+|++.+.|.+
T Consensus 96 ~~~-~~~~lG~~~i~l~~l~-~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p-------------------------- 147 (284)
T 2r83_A 96 RFS-KHDIIGEFKVPMNTVD-FGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVP-------------------------- 147 (284)
T ss_dssp SSS-CCCEEEEEEEEGGGCC-CSSCEEEEEECBCCSSCCCCCCCEEEEEEEEET--------------------------
T ss_pred CCC-CCceeEEEEEcchhcc-cCCcceeEEEeeccccccccccccEEEEEEecC--------------------------
Confidence 876 8999999999999987 45677899999876432 234577776654420
Q ss_pred CCCCcccccccccCCcccccCcccccCCCCCCCCCCCCCCCCCCCCchhhccCCCCCccCCCCCCCCCCCCccccccccc
Q 002002 161 KPPEKAVGEEKKEEKPATVEGKKEEEKPKEEKPPEENTNPKPAEAPPAAAAVAATPVEVQNPPLAQSDKPSNAKDKATVT 240 (983)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 240 (983)
T Consensus 148 -------------------------------------------------------------------------------- 147 (284)
T 2r83_A 148 -------------------------------------------------------------------------------- 147 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCccccccccCCCCCCcccccCCcCEEEEEEEEeecCCC---CCCCCcEEEEEEc--C---eeeeeeec--C
Q 002002 241 ETKTQELRLNEHELRSLTSDRSRSAYDLVDRMPFLYVRVLKAKRAGN---VSNGSLYAKLVIG--T---HSIKTKSQ--A 310 (983)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~V~v~~a~~L~~---~~~~dPyv~v~~~--~---~~~kTk~~--~ 310 (983)
..+.|.|+|++|++|+. .|.+||||++++. + .+.+|+++ +
T Consensus 148 ------------------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t 197 (284)
T 2r83_A 148 ------------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT 197 (284)
T ss_dssp ------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred ------------------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCC
Confidence 11569999999999973 4689999999995 3 35788888 7
Q ss_pred C-CccceEEEEeecC--CCCCeEEEEEEcCCcCCccccCCceeEEEEEeccccCCC--------CCCCCCCCCceEEccc
Q 002002 311 D-KDWDQVFAFDKEG--LNSTSLEVSVWSEEKKENEECTENCLGTVLFDLQEVPKR--------VPPDSPLAPQWYSLES 379 (983)
Q Consensus 311 ~-P~Wne~f~f~~~~--~~~~~l~v~V~d~d~~~~d~~~d~~lG~~~i~l~~l~~~--------~~~~~~l~~~w~~L~~ 379 (983)
+ |+|||+|.|.+.. +....|.|+|||++. ++++++||.+.+++..+... ..+..+. .+||+|..
T Consensus 198 ~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~-~~W~~L~~ 272 (284)
T 2r83_A 198 LNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK----IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPI-AQWHTLQV 272 (284)
T ss_dssp SSCEEEEEEEEECCTTTGGGEEEEEEEEECCS----SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCE-EEEEECBC
T ss_pred CCCEEceeEEEeCCHHHhCceEEEEEEEeCCC----CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCch-heeeecCC
Confidence 7 9999999998753 345689999999985 67999999999999864221 1112222 48999876
Q ss_pred C
Q 002002 380 E 380 (983)
Q Consensus 380 ~ 380 (983)
.
T Consensus 273 ~ 273 (284)
T 2r83_A 273 E 273 (284)
T ss_dssp H
T ss_pred c
Confidence 4
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.96 E-value=1.8e-28 Score=269.40 Aligned_cols=226 Identities=23% Similarity=0.287 Sum_probs=180.5
Q ss_pred EEEEEEEEEeeCCCCCCCCCCCCCCCCcEEEEEE---CCeEEEeeeeeeccCCCCCCCCcccceEEEEecCCC--CCcEE
Q 002002 427 WYLRLTVIQTQDLQPGSGSEPKVRSPELYVKGQL---GAQLFKTGRTSVGLSPSSSANPTWNEDLVFVAAEPF--EPFLV 501 (983)
Q Consensus 427 ~~L~V~Viea~~L~~~~~~~d~~~~sdpyv~v~l---g~~~~rT~~~~~~~~~~~t~nP~wne~f~f~~~~~~--~~~L~ 501 (983)
+.|+|+|++|++|+.+ |..+.+||||++++ +.+++||++++ +++||.|||.|.|.+..+. ...|.
T Consensus 20 ~~L~v~v~~a~~L~~~----d~~g~~dPyv~v~l~~~~~~~~kT~v~~------~t~nP~wne~f~f~v~~~~l~~~~L~ 89 (296)
T 1dqv_A 20 DQLVVRILQALDLPAK----DSNGFSDPYVKIYLLPDRKKKFQTKVHR------KTLNPIFNETFQFSVPLAELAQRKLH 89 (296)
T ss_dssp CEEEEEEEEEECCCCC----STTSCCCEEEEEECTTSTTSCEECCCCC------SCSSCEEEEEEEEECCGGGGSSCCCE
T ss_pred CEEEEEEEEeECCCCc----CCCCCcCeEEEEEEEcCCCeeEeCCccC------CCCCCcEeeEEEEEecHHHhcCCEEE
Confidence 4699999999999987 88899999999999 66889999985 5899999999999986443 45899
Q ss_pred EEEEeCc---CCceeEEEEEe-cccccccccCCCCCcceEEeccCCCC-CCcceEEEEEEEEeccccccccccccCCchh
Q 002002 502 VTVEDVT---NGCSVGHARIQ-MSTVERRIDDRAEPKSRWFNLVGDET-RPYAGRIHLRACLEGGYHVLDEAAHVTSDVR 576 (983)
Q Consensus 502 i~V~D~d---~d~~lG~~~i~-L~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~l~l~i~l~g~~~v~~~~~~~~~d~~ 576 (983)
|+|||++ ++++||++.++ +..+... . .....|+.|....+ ....|.|.+.+...
T Consensus 90 ~~V~d~d~~~~~~~iG~~~i~~l~~~~~~--~--~~~~~w~~L~~~~~~~~~~G~i~vsl~y~----------------- 148 (296)
T 1dqv_A 90 FSVYDFDRFSRHDLIGQVVLDNLLELAEQ--P--PDRPLWRDILEGGSEKADLGELNFSLCYL----------------- 148 (296)
T ss_dssp EEEEECCSSSCCCEEEEEECCCTTGGGSS--C--SSCCCCEECBCCSSCCSCCCEEEEEEEEE-----------------
T ss_pred EEEEEcCCCCCCceEEEEEeccccccccC--C--ccceeeeccccccccccccceEEEEEEec-----------------
Confidence 9999988 78999999996 5444321 1 24568999975432 34468887765432
Q ss_pred HHHHhhccCCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEEC--C---EEEEeeeecCCCCCeeceEEEEEEecC-
Q 002002 577 AAAKQLAKSPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG--P---KWVRTRTILDRFNPRWNEQYTWDVYDP- 650 (983)
Q Consensus 577 ~~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~--~---~~~rT~~~~~t~nP~Wne~~~~~v~~~- 650 (983)
+..|.|.|.|++|+||+++ |. .|.+||||++++. + ...||+++++++||.|||.|.|.+...
T Consensus 149 --------~~~~~l~v~v~~a~~L~~~---d~-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 216 (296)
T 1dqv_A 149 --------PTAGLLTVTIIKASNLKAM---DL-TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPES 216 (296)
T ss_dssp --------TTTTEEEEEEEEEESCCCC---SS-SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGG
T ss_pred --------cccceeEEEEEEeecCCcc---CC-CCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHH
Confidence 2457999999999999766 56 7889999999985 2 578999999999999999999998654
Q ss_pred --CCEEEEEEEeCCCCCCcCCCCCCCCceeEEEEEEcccccC-------------CCeEEEEEEeeec
Q 002002 651 --CTVLTIGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDT-------------NRVYLNSYSLTVL 703 (983)
Q Consensus 651 --~~~l~i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~-------------~~~~~~~~~L~~~ 703 (983)
...|.|+|||++..+ +|++||.+.|++..+.. ++...+|++|...
T Consensus 217 l~~~~L~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 217 VENVGLSIAVVDYDCIG--------HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp GGSCCCCCEEEECCSSS--------CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred ccCcEEEEEEEeCCCCC--------CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 347999999999988 78899999999987642 3445566666543
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.95 E-value=2e-27 Score=260.99 Aligned_cols=215 Identities=19% Similarity=0.294 Sum_probs=174.0
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE---CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF---DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDK 81 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~ 81 (983)
..+.|.|+|++|++|+++|..|.+||||++.+ +.++++|+++++++||.|||+|.|.+... ++....|.|.|||.+
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLA-ELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGG-GGSSCCCEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHH-HhcCCEEEEEEEEcC
Confidence 46789999999999999999999999999999 45889999999999999999999998653 334568999999988
Q ss_pred CCCCCCCccEEEEEE-CccceecCCeeeEEEEceecCCcceeeeEEEEEEEEecCCCCCCCcccccccCCCCCCCcccCC
Q 002002 82 KTGKRSTFLGKVKIA-GSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYIDEDPPAPAPEAAAVAEPATKPEAAVAD 160 (983)
Q Consensus 82 ~~~~~d~~lG~~~i~-l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (983)
.++ ++++||++.++ +..+...+.....|++|..........|+|.+.+.|.+
T Consensus 97 ~~~-~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~-------------------------- 149 (296)
T 1dqv_A 97 RFS-RHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLP-------------------------- 149 (296)
T ss_dssp SSS-CCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEET--------------------------
T ss_pred CCC-CCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecc--------------------------
Confidence 886 89999999996 54554334456779999765443345677777765430
Q ss_pred CCCCcccccccccCCcccccCcccccCCCCCCCCCCCCCCCCCCCCchhhccCCCCCccCCCCCCCCCCCCccccccccc
Q 002002 161 KPPEKAVGEEKKEEKPATVEGKKEEEKPKEEKPPEENTNPKPAEAPPAAAAVAATPVEVQNPPLAQSDKPSNAKDKATVT 240 (983)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 240 (983)
T Consensus 150 -------------------------------------------------------------------------------- 149 (296)
T 1dqv_A 150 -------------------------------------------------------------------------------- 149 (296)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCccccccccCCCCCCcccccCCcCEEEEEEEEeecCCC---CCCCCcEEEEEEc--C---eeeeeeec--C
Q 002002 241 ETKTQELRLNEHELRSLTSDRSRSAYDLVDRMPFLYVRVLKAKRAGN---VSNGSLYAKLVIG--T---HSIKTKSQ--A 310 (983)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~V~v~~a~~L~~---~~~~dPyv~v~~~--~---~~~kTk~~--~ 310 (983)
..+.|.|+|++|++|+. .|.+||||+++++ + .+.+|+++ +
T Consensus 150 ------------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t 199 (296)
T 1dqv_A 150 ------------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNT 199 (296)
T ss_dssp ------------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSC
T ss_pred ------------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCC
Confidence 01579999999999973 4678999999996 3 35789988 7
Q ss_pred C-CccceEEEEeecC--CCCCeEEEEEEcCCcCCccccCCceeEEEEEeccccC
Q 002002 311 D-KDWDQVFAFDKEG--LNSTSLEVSVWSEEKKENEECTENCLGTVLFDLQEVP 361 (983)
Q Consensus 311 ~-P~Wne~f~f~~~~--~~~~~l~v~V~d~d~~~~d~~~d~~lG~~~i~l~~l~ 361 (983)
+ |+|||.|.|.+.. +....|.|+|||++. +++|++||.+.+++.++.
T Consensus 200 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 200 LNPTYNEALVFDVAPESVENVGLSIAVVDYDC----IGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp SSCEEEECCCCCCCSGGGGSCCCCCEEEECCS----SSCCEEEEECCCSSCTTC
T ss_pred CCCeECceEEEEcCHHHccCcEEEEEEEeCCC----CCCCceEEEEEECCccCC
Confidence 7 9999999998753 335689999999985 678999999999998764
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.2e-19 Score=174.10 Aligned_cols=123 Identities=26% Similarity=0.438 Sum_probs=110.0
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEEEeCCCC
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRY 664 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~~ 664 (983)
...|.|.|+|++|+||+++ |. .|++||||+++++++..||+++++++||.|||+|.|.+.++...|.|+|||++..
T Consensus 10 ~~~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAA---DF-SGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSEEEEEEEEEEESCCCS---SS-SSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred CCceEEEEEEEeeECCCCC---CC-CCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 5789999999999999765 55 7899999999999999999999999999999999999998888999999999998
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEEe
Q 002002 665 KRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTC 722 (983)
Q Consensus 665 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~ 722 (983)
+ +|++||++.|+|.++..+. .+||+|......+ +..|+|+++++|.+
T Consensus 86 ~--------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K--------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp E--------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred C--------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 7 6889999999999998876 6899998765443 45799999999863
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.4e-18 Score=168.19 Aligned_cols=128 Identities=23% Similarity=0.278 Sum_probs=109.2
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKTG 84 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~~ 84 (983)
..+.|.|+|++|++|+.++. |.+||||++++++++++|+++++++||+|||+|.|.+..+.......|.|+|||.+..+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 35799999999999999998 99999999999999999999999999999999999997542223689999999988886
Q ss_pred CCCCccEEEEEECccceecCCeeeEEEE---ceecCCcceeeeEEEEEEEEecCC
Q 002002 85 KRSTFLGKVKIAGSTFAKVGSESSVYYP---LEKRSVFSQIKGEIGLKVYYIDED 136 (983)
Q Consensus 85 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~---L~~~~~~s~~~G~l~l~i~~~~~~ 136 (983)
+|++||++.+++..+. .+.....|++ |.+... ....|+|++++.|.+.+
T Consensus 84 -~~~~lG~~~i~l~~l~-~~~~~~~w~~l~~l~~~~~-~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 84 -QNKLIGTATVALKDLT-GDQSRSLPYKLISLLNEKG-QDTGATIDLVIGYDPPS 135 (140)
T ss_dssp -SCCCCEEEEEEGGGTC-SSSCEEEEEEEEEEECTTC-CEEEEEEEEEEEECCCB
T ss_pred -CCceEEEEEEEHHHhc-cCCCceeEEeeeeccCCCC-CCCCCEEEEEEEEECCC
Confidence 8999999999999987 4566778988 655433 24679999999998643
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=1.1e-18 Score=170.54 Aligned_cols=122 Identities=30% Similarity=0.559 Sum_probs=109.4
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCC-
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKT- 83 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~- 83 (983)
..+.|.|+|++|++|+++|..|.+||||++.+++++++|+++++++||.|||+|.|.+..+ ...|.|+|||.+..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~----~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS----SDRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST----TCEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC----CCEEEEEEEECCCCc
Confidence 4689999999999999999999999999999999999999999999999999999999775 57899999998874
Q ss_pred ---------CCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 84 ---------GKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 84 ---------~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
.++++|||++.+++..+. .....||+|.+++..+...|+|+|++.|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~---~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLS---GEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCC---SEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCc---CCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 128999999999999984 46689999998877666889999999885
No 8
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=8.9e-19 Score=168.65 Aligned_cols=125 Identities=21% Similarity=0.290 Sum_probs=110.6
Q ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcC-CCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCC
Q 002002 4 SCNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKF-RDLNPQWDERLEFLVHDAESMPTEILEINLYNDKK 82 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~ 82 (983)
...+.|.|+|++|++|+.+|..|.+||||++++++++++|++++ +++||.|||+|.|.+... ...|.|+|||.+.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~----~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEG----TTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESS----CCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCC----CCEEEEEEEECCC
Confidence 45689999999999999999999999999999999999999998 899999999999999863 6899999998887
Q ss_pred CCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEecCC
Q 002002 83 TGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYIDED 136 (983)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~~~ 136 (983)
++ +|++||++.+++..+...+.....||+|.+. ....|+|+|++.|.+..
T Consensus 83 ~~-~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~---~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 83 GT-EDDAVGEATIPLEPVFVEGSIPPTAYNVVKD---EEYKGEIWVALSFKPSG 132 (136)
T ss_dssp CT-TTCCSEEEEEESHHHHHHSEEEEEEEEEEET---TEEEEEEEEEEEEEECC
T ss_pred CC-CCceEEEEEEEHHHhccCCCCCcEEEEeecC---CccCEEEEEEEEEEeCC
Confidence 76 8999999999999996456667899999832 35789999999998643
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.79 E-value=2.6e-18 Score=167.92 Aligned_cols=121 Identities=21% Similarity=0.346 Sum_probs=106.1
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEEEeCCCC-
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRY- 664 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~~- 664 (983)
..|.|.|+|++|+||+++ |. .|++||||++.+++...+|+++++++||.|||+|.|.+..+...|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAK---DK-TGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCC---ST-TSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCC---CC-CCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 469999999999999765 55 7899999999999999999999999999999999999988888999999999985
Q ss_pred ----------CCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 665 ----------KRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 665 ----------~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
+ +|++||++.|+|.++. ....+||+|......+ +..|+|+|++.|.
T Consensus 91 ~~~~~~~~~~~--------~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRE--------SDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSC--------SSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccccCC--------CCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 4 6889999999999994 3458999998553333 3569999999986
No 10
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=4.3e-19 Score=170.12 Aligned_cols=123 Identities=26% Similarity=0.496 Sum_probs=109.3
Q ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCC
Q 002002 4 SCNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKT 83 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~ 83 (983)
...+.|.|+|++|++|+++|..|.+||||++.+++++++|+++++++||.|||+|.|.+... ...|.|+|||.+..
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~----~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI----HDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT----TCEEEEEEEEEETT
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC----CCEEEEEEEECCCC
Confidence 45689999999999999999999999999999999999999999999999999999999765 57899999998887
Q ss_pred CCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEec
Q 002002 84 GKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYID 134 (983)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~ 134 (983)
+ ++++||++.+++..+.. + ...||+|.++.......|+|+|++.|..
T Consensus 86 ~-~~~~lG~~~i~l~~l~~-~--~~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K-PPDFLGKVAIPLLSIRD-G--QPNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp E-EEEECCBCEEEGGGCCS-S--CCEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred C-CCCeeEEEEEEHHHccC-C--CceEEEeecCCCCCccceEEEEEEEEEe
Confidence 5 79999999999999863 2 3589999987655567899999998864
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.2e-18 Score=175.62 Aligned_cols=129 Identities=26% Similarity=0.394 Sum_probs=104.6
Q ss_pred CcCCCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC------eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEE
Q 002002 2 AESCNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG------QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEI 75 (983)
Q Consensus 2 a~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v 75 (983)
.....+.|.|+|++|++|+.++..|.+||||++.+++ ++++|+++++++||.|||+|.|.+... ...|.|
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~----~~~L~~ 78 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ----RHRILF 78 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT----TCEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC----CCEEEE
Confidence 4567799999999999999999999999999999975 678999999999999999999999754 578999
Q ss_pred EEEeCCCCCCCCCccEEEEEECccceecCCee-----eEEEEceecCCcceeeeEEEEEEEEecC
Q 002002 76 NLYNDKKTGKRSTFLGKVKIAGSTFAKVGSES-----SVYYPLEKRSVFSQIKGEIGLKVYYIDE 135 (983)
Q Consensus 76 ~V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~-----~~w~~L~~~~~~s~~~G~l~l~i~~~~~ 135 (983)
.|||.+.++ +++|||++.|+|..+....... ..||+|..+...++..|+|+|++.|.+.
T Consensus 79 ~V~d~d~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 79 EVFDENRLT-RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp EEEECC-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred EEEECCCCC-CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 999988886 8999999999999988433221 2899999887766788999999999854
No 12
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=170.14 Aligned_cols=116 Identities=21% Similarity=0.295 Sum_probs=100.7
Q ss_pred CCcEEEEEEEEeeCCCCCCC----------CCCCCeEEEEEECCeE-EeeeCcCCCCCCeeeeEEEEEeeecCCCCCceE
Q 002002 5 CNRKLIVEVCNAKNLMPKDG----------QGTASAYVIVDFDGQR-RRTKTKFRDLNPQWDERLEFLVHDAESMPTEIL 73 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~----------~g~~dPyv~v~~~~~~-~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L 73 (983)
..+.|+|+|++|++|+++|. .|++||||+|.+++++ .+|+++++|+||.|||+|.|.+.. ...|
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-----~~~L 101 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-----GGHL 101 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-----ECEE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-----CCEE
Confidence 35789999999999999883 3789999999999854 799999999999999999999875 3689
Q ss_pred EEEEEeCCCCCCCCCccEEEEEECccceec---CCeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 74 EINLYNDKKTGKRSTFLGKVKIAGSTFAKV---GSESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 74 ~v~V~~~~~~~~~d~~lG~~~i~l~~l~~~---~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
.|+|||++.++ +|+|||++.|++.++... +...+.||+|++ .|.|+|++.|.
T Consensus 102 ~~~V~D~d~~~-~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPLG-YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSSS-SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEEECCCCC-CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 99999988876 899999999999998732 367889999975 49999999874
No 13
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=1e-18 Score=168.22 Aligned_cols=123 Identities=25% Similarity=0.331 Sum_probs=108.4
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeeceEEEEEEecCCCEEEEEEEeCCC
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIL-DRFNPRWNEQYTWDVYDPCTVLTIGVFDNGR 663 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~-~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~ 663 (983)
.+.|.|.|+|++|++|+++ |. .|++||||++++++...||++++ +++||.|||+|.|.+.+....|.|+|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDA---DF-LNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSC---CS-SCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCc---cc-CCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC
Confidence 4689999999999999765 55 78999999999999889999999 8999999999999999877899999999999
Q ss_pred CCCcCCCCCCCCceeEEEEEEcccc-cCCCeEEEEEEeeecCCCCCccceEEEEEEEEEec
Q 002002 664 YKRDEAGKPGKDVRVGKIRVRLSTL-DTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTCS 723 (983)
Q Consensus 664 ~~~~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~~ 723 (983)
++ +|++||++.|+|.++ ..+.....||+|. . .+ +..|+|++++.|.+.
T Consensus 83 ~~--------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~--~~-~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 GT--------EDDAVGEATIPLEPVFVEGSIPPTAYNVV-K--DE-EYKGEIWVALSFKPS 131 (136)
T ss_dssp CT--------TTCCSEEEEEESHHHHHHSEEEEEEEEEE-E--TT-EEEEEEEEEEEEEEC
T ss_pred CC--------CCceEEEEEEEHHHhccCCCCCcEEEEee-c--CC-ccCEEEEEEEEEEeC
Confidence 87 788999999999999 5566668899998 2 22 457999999999753
No 14
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.6e-18 Score=170.51 Aligned_cols=125 Identities=29% Similarity=0.439 Sum_probs=101.8
Q ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC------eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEE
Q 002002 4 SCNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG------QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINL 77 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V 77 (983)
...+.|.|+|++|++|+.+|..|.+||||++++.+ ..++|+++++++||.|||+|.|.+... ...|.|+|
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~----~~~l~~~V 92 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ----QHRLLFEV 92 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT----TCEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC----CCEEEEEE
Confidence 45579999999999999999999999999999963 588999999999999999999999764 57899999
Q ss_pred EeCCCCCCCCCccEEEEEECccceecCCe-----eeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 78 YNDKKTGKRSTFLGKVKIAGSTFAKVGSE-----SSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 78 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-----~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
||.+..+ ++++||++.+++.++...... ...||+|.++...+...|+|+|++.|.
T Consensus 93 ~d~d~~~-~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 93 FDENRLT-RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp EECCSSS-CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EECCCCc-CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9988876 899999999999998743321 259999988765556789999999986
No 15
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=3.3e-18 Score=165.52 Aligned_cols=124 Identities=23% Similarity=0.327 Sum_probs=105.9
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeeceEEEEEEecC----CCEEEEEEEeC
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTILDRFNPRWNEQYTWDVYDP----CTVLTIGVFDN 661 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~~t~nP~Wne~~~~~v~~~----~~~l~i~v~D~ 661 (983)
..|.|.|+|++|+||+.+ | .|++||||+++++++..||+++++++||+|||+|.|.+..+ ...|.|+|||+
T Consensus 5 ~~g~L~v~v~~a~~L~~~---~--~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKT---K--FGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp BCCEEEEEEEEEESCCCC---S--SSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCcEEEEEEEEeeCCCCC---C--CCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 468999999999999776 3 37899999999999999999999999999999999999753 57999999999
Q ss_pred CCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec-CCCCCccceEEEEEEEEEe
Q 002002 662 GRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL-LPGGAKKMGEIEIAVRFTC 722 (983)
Q Consensus 662 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-~~~g~~~~G~l~l~~~f~~ 722 (983)
+..+ +|++||++.|+|.+|..+.....||+|... ...+.+..|+|++++.|.+
T Consensus 80 d~~~--------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 80 ETIG--------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp TCSS--------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCCC--------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 9987 688999999999999988888899883322 2234345799999999963
No 16
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=169.37 Aligned_cols=119 Identities=22% Similarity=0.259 Sum_probs=101.8
Q ss_pred CCcEEEEEEEceeccccccccCC-------CCCCCCCcEEEEEECCEE-EEeeeecCCCCCeeceEEEEEEecCCCEEEE
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKD-------GTRGTTDAYVVAKYGPKW-VRTRTILDRFNPRWNEQYTWDVYDPCTVLTI 656 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d-------~~~g~sDpy~~~~~~~~~-~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i 656 (983)
...|.|+|+|++|++|++++... . .|.+||||++++++.. .||+++++|+||+|||+|.|.+.+ ...|.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~-~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~ 103 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKG-HQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLEL 103 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSS-CCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccC-CCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEE
Confidence 46899999999999998774110 1 3679999999998865 699999999999999999999976 458999
Q ss_pred EEEeCCCCCCcCCCCCCCCceeEEEEEEcccccCC----CeEEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 657 GVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTN----RVYLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 657 ~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
+|||+|.++ +|++||++.|+|.++..+ .....||+|.. .|.|++.+.|.
T Consensus 104 ~V~D~d~~~--------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~~ 156 (157)
T 2fk9_A 104 AVFHETPLG--------YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITLT 156 (157)
T ss_dssp EEEECCSSS--------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEEC
T ss_pred EEEECCCCC--------CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEEE
Confidence 999999988 788999999999999754 67899999962 59999999884
No 17
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.76 E-value=3.5e-18 Score=168.03 Aligned_cols=124 Identities=24% Similarity=0.361 Sum_probs=101.6
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC------EEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEE
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP------KWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGV 658 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~------~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v 658 (983)
+..|.|.|+|++|+||+.+ |. .|++||||++++++ ...||+++++++||.|||+|.|.+......|.|+|
T Consensus 17 ~~~~~L~V~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKK---DI-LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp TTCEEEEEEEEEEESCC-----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCC---CC-CCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 5679999999999999765 55 78999999999863 57899999999999999999999988778999999
Q ss_pred EeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCe------EEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 659 FDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRV------YLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
||++..+ +|++||++.|+|.++..+.. ..+||+|......+ +..|+|++++.|.
T Consensus 93 ~d~d~~~--------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 93 FDENRLT--------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYL 152 (153)
T ss_dssp EECCSSS--------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEEC
T ss_pred EECCCCc--------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEe
Confidence 9999987 78899999999999976542 24899997654333 4579999999984
No 18
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.75 E-value=7.3e-18 Score=161.27 Aligned_cols=122 Identities=25% Similarity=0.362 Sum_probs=103.9
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC--eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG--QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKT 83 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~--~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~ 83 (983)
...|.|+|++|++|+++|..|.+||||++.+++ ++++|+++++++||.|||+|.|.+... ..|.|+|||.+..
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-----~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-----DSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-----CCEEEEEEEGGGT
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-----CEEEEEEEECCCC
Confidence 468999999999999999999999999999975 899999999999999999999999764 3599999998877
Q ss_pred CC--CCCccEEEEEECccceecCCeeeEEEEceecC--CcceeeeEEEEEEEE
Q 002002 84 GK--RSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS--VFSQIKGEIGLKVYY 132 (983)
Q Consensus 84 ~~--~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~--~~s~~~G~l~l~i~~ 132 (983)
++ .|+|||++.+++..+........+|++|.+.. ......|+|++++.+
T Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 79 HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 52 28999999999998854556667899998773 233468999999864
No 19
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.75 E-value=1.1e-17 Score=168.46 Aligned_cols=125 Identities=23% Similarity=0.342 Sum_probs=101.1
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC------EEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEE
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP------KWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGV 658 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~------~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v 658 (983)
...|.|.|+|++|++|+.+ |. .|++||||++.+++ ...+|+++++++||.|||.|.|.+......|.|+|
T Consensus 5 ~~~g~L~V~v~~a~~L~~~---d~-~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V 80 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKK---DI-LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEV 80 (176)
T ss_dssp TTCEEEEEEEEEEESCC------C-CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCc---CC-CCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEE
Confidence 4689999999999999765 55 78999999999875 67899999999999999999999987777999999
Q ss_pred EeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeE-E-----EEEEeeecCCCCCccceEEEEEEEEEe
Q 002002 659 FDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVY-L-----NSYSLTVLLPGGAKKMGEIEIAVRFTC 722 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~l~l~~~f~~ 722 (983)
||++.++ +|++||++.|+|.++..+... . .||+|......+ +..|+|+|++.|.+
T Consensus 81 ~d~d~~~--------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 81 FDENRLT--------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 141 (176)
T ss_dssp EECC------------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred EECCCCC--------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEe
Confidence 9999987 788999999999999876432 2 799998764444 45699999999963
No 20
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=7.8e-18 Score=159.70 Aligned_cols=118 Identities=20% Similarity=0.228 Sum_probs=99.6
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC---EEEEeeeecCCCCCeeceEEEEEEec-CCCEEEEEEEeCC
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP---KWVRTRTILDRFNPRWNEQYTWDVYD-PCTVLTIGVFDNG 662 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~---~~~rT~~~~~t~nP~Wne~~~~~v~~-~~~~l~i~v~D~d 662 (983)
.|.|.|+|++|+||++++..|. .|++||||++++++ ...||+++++++||.|||+|.|.+.. ....|.|+|||++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~-~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDM-LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHH-HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCcccc-CCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 5899999999999987533355 68999999999985 78999999999999999999999954 4568999999999
Q ss_pred CCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEE
Q 002002 663 RYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRF 720 (983)
Q Consensus 663 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f 720 (983)
..+ |++||++.|+|.++..+.....||+|.. ...|.|++.+..
T Consensus 81 ~~~---------~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~ 123 (126)
T 1rlw_A 81 YVM---------DETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEV 123 (126)
T ss_dssp SSC---------CEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEEC
T ss_pred CCC---------CceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEe
Confidence 754 6799999999999999998899999863 234777776643
No 21
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.74 E-value=1.3e-17 Score=160.36 Aligned_cols=116 Identities=21% Similarity=0.373 Sum_probs=100.0
Q ss_pred CcEEEEEEEEeeCCCCCCCCCC-----------CCeEEEEEECCeE-EeeeCcCCCCCCeeeeEEEEEeeecCCCCCceE
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGT-----------ASAYVIVDFDGQR-RRTKTKFRDLNPQWDERLEFLVHDAESMPTEIL 73 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~-----------~dPyv~v~~~~~~-~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L 73 (983)
.+.|.|+|++|++|+++|..|. +||||++.++++. .+|+++++|+||.|||+|.|.+... ..|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-----~~L 79 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-----RKI 79 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-----CEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-----CEE
Confidence 5789999999999999875443 9999999998854 7999999999999999999998763 789
Q ss_pred EEEEEeCCCCCCCCCccEEEEEECccceecC-CeeeEEEEceecCCcceeeeEEEEEEEEec
Q 002002 74 EINLYNDKKTGKRSTFLGKVKIAGSTFAKVG-SESSVYYPLEKRSVFSQIKGEIGLKVYYID 134 (983)
Q Consensus 74 ~v~V~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~ 134 (983)
.|+|||.+..+ +|++||++.+++.++...+ ...+.|++|++ +|+|+|++.|.+
T Consensus 80 ~~~V~d~d~~~-~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPIG-YDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSSS-SCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEEEE
T ss_pred EEEEEeCCCCC-CCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEEEe
Confidence 99999988876 8999999999999987432 34589999975 499999999874
No 22
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.73 E-value=1.7e-17 Score=159.57 Aligned_cols=120 Identities=20% Similarity=0.277 Sum_probs=99.3
Q ss_pred CcEEEEEEEceeccccccccCCC-------CCCCCCcEEEEEECCEE-EEeeeecCCCCCeeceEEEEEEecCCCEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDG-------TRGTTDAYVVAKYGPKW-VRTRTILDRFNPRWNEQYTWDVYDPCTVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~-------~~g~sDpy~~~~~~~~~-~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~ 657 (983)
..|.|+|+|++|+||++++.... ..+.+||||++.+++.. .+|+++++|+||.|||+|+|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 35899999999999987641100 01239999999998754 6999999999999999999999876 899999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccccCC--CeEEEEEEeeecCCCCCccceEEEEEEEEEe
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTN--RVYLNSYSLTVLLPGGAKKMGEIEIAVRFTC 722 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~ 722 (983)
|||+|..+ +|++||++.|+|.++..+ .....|++|. +.|+|++.+.|..
T Consensus 83 V~d~d~~~--------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIG--------YDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSS--------SCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEE
T ss_pred EEeCCCCC--------CCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEe
Confidence 99999987 788999999999999863 3457899875 2599999999964
No 23
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=3.8e-17 Score=163.19 Aligned_cols=125 Identities=20% Similarity=0.251 Sum_probs=104.8
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKTG 84 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~~ 84 (983)
..+.|.|+|++|++|+.++..+.+||||+|.+++++++|+++++++||+|||+|.|.+. + ...|.|+|||.+.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~----~~~L~~~V~D~d~~~ 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-P----VSKLHFRVWSHQTLK 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-T----TCEEEEEEEECCSSS
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-C----CCEEEEEEEECCCCC
Confidence 56889999999999995444555999999999999999999999999999999999984 2 689999999988886
Q ss_pred CCCCccEEEEEECccceecC----CeeeEEEEceecCCcceeeeEEEEEEEEecC
Q 002002 85 KRSTFLGKVKIAGSTFAKVG----SESSVYYPLEKRSVFSQIKGEIGLKVYYIDE 135 (983)
Q Consensus 85 ~~d~~lG~~~i~l~~l~~~~----~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~~ 135 (983)
+|+|||++.+++.++.... .....|++|.+........|+|.+.+.|...
T Consensus 109 -~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 109 -SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp -CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred -CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 8999999999999987321 1236799999875444678999999998854
No 24
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=7.2e-17 Score=152.98 Aligned_cols=115 Identities=24% Similarity=0.395 Sum_probs=98.9
Q ss_pred CcEEEEEEEEeeCCCCC---CCCCCCCeEEEEEECC---eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 6 NRKLIVEVCNAKNLMPK---DGQGTASAYVIVDFDG---QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~---d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
.+.|.|+|++|++|+++ |..|.+||||++.+++ ++++|+++++++||.|||+|.|.+..+. ...|.|+|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~---~~~l~i~V~d 78 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQ---ENVLEITLMD 78 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTS---CCEEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCC---CCEEEEEEEE
Confidence 57899999999999984 6678999999999985 7899999999999999999999996543 6789999998
Q ss_pred CCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEE
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVY 131 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~ 131 (983)
.+.. ++++||++.+++..+. .+.....|++|.+. ..|+|++++.
T Consensus 79 ~d~~--~~~~iG~~~i~l~~l~-~~~~~~~~~~L~~~-----~~g~i~~~le 122 (126)
T 1rlw_A 79 ANYV--MDETLGTATFTVSSMK-VGEKKEVPFIFNQV-----TEMVLEMSLE 122 (126)
T ss_dssp CCSS--CCEEEEEEEEEGGGSC-TTCEEEEEEEETTT-----EEEEEEEEEE
T ss_pred CCCC--CCceeEEEEEEHHHcc-CCCcEEEEEEcCCC-----ceEEEEEEEE
Confidence 8766 5889999999999987 67788899999863 3477777663
No 25
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.71 E-value=7.7e-17 Score=154.12 Aligned_cols=124 Identities=18% Similarity=0.252 Sum_probs=98.5
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC--EEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEEEeCCCC
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP--KWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRY 664 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~--~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~~ 664 (983)
...|+|+|++|++|+++ |. .|++||||++++++ ...+|+++++++||.|||+|.|.+.++. .|.|+|||++..
T Consensus 4 ~~~L~V~v~~a~~L~~~---d~-~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~ 78 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKK---DF-FRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEEESCCCC---ST-TCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGT
T ss_pred eEEEEEEEEEeECCCCC---CC-CCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCC
Confidence 45799999999999765 56 88999999999974 7899999999999999999999998765 499999999987
Q ss_pred CCcCCCCCCCCceeEEEEEEccccc-CCCeEEEEEEeeecCCCC-CccceEEEEEEEE
Q 002002 665 KRDEAGKPGKDVRVGKIRVRLSTLD-TNRVYLNSYSLTVLLPGG-AKKMGEIEIAVRF 720 (983)
Q Consensus 665 ~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~g-~~~~G~l~l~~~f 720 (983)
+.. ..|++||.+.|++..|. .+.....|++|....+.+ .+..|+|++++.+
T Consensus 79 ~~~-----~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 79 HKK-----QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TSS-----TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCC-----CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 610 02789999999999882 222224678887653322 2447999998864
No 26
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=1.3e-16 Score=159.33 Aligned_cols=123 Identities=16% Similarity=0.179 Sum_probs=102.0
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEEEeCCCC
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRY 664 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~~ 664 (983)
...+.|.|+|++|++|+..+ + .+++||||++++++...||+++++++||+|||+|.|.+. +...|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~--~--~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKK--N--WFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC------CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcc--c--CCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCC
Confidence 35789999999999997322 3 455999999999999999999999999999999999984 578999999999998
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCC---C--eEEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 665 KRDEAGKPGKDVRVGKIRVRLSTLDTN---R--VYLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 665 ~~~~~~~~~~d~~lG~~~i~l~~l~~~---~--~~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
+ +|++||++.|+|.++..+ . ....|++|.... .+.+..|+|.+.+.|.
T Consensus 108 ~--------~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~-~~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 108 K--------SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK-EPTETIGDLSICLDGL 160 (173)
T ss_dssp S--------CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS-CTTSEEEEEEEEEESE
T ss_pred C--------CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC-CCCcccEEEEEEEeee
Confidence 7 788999999999998642 1 235699998763 2335679999998875
No 27
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.69 E-value=1.1e-16 Score=153.25 Aligned_cols=108 Identities=20% Similarity=0.395 Sum_probs=92.1
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE-----CCeEEeeeCcCCCCCCeeeeEEEEE-eeecCCCCCceEEEEEEe
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDF-----DGQRRRTKTKFRDLNPQWDERLEFL-VHDAESMPTEILEINLYN 79 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~WnE~f~f~-v~~~~~l~~~~L~v~V~~ 79 (983)
.+.|.|+|++|++|+. +..|.+||||++.+ ...+++|+++++++||+|||+|.|. +... ++....|.|+|||
T Consensus 19 ~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~-~l~~~~L~~~V~d 96 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKE-TLRQRELQLSVLS 96 (134)
T ss_dssp TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHH-HHTTCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHH-HhCcCEEEEEEEE
Confidence 4789999999999997 77889999999999 3478999999999999999999999 6542 2235799999999
Q ss_pred CCCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
.+..+ ++++||++.+++..+. .+.....||+|.+.+
T Consensus 97 ~d~~~-~~~~lG~~~i~l~~l~-~~~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 97 AESLR-ENFFLGGITLPLKDFN-LSKETVKWYQLTAAT 132 (134)
T ss_dssp CCSSS-CCEEEEEEEEEGGGSC-TTSCEEEEEECBC--
T ss_pred CCCCC-CCcEEEEEEEEhhhcc-CCCCcceeEECCCcc
Confidence 88876 7899999999999987 456778999998763
No 28
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=156.43 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=90.9
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC------EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP------KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTI 656 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~------~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i 656 (983)
..|.|.|.|++|+||+++ |. .|++||||++++.+ ...||+++++|+||+|||+|.|.+... ...|.|
T Consensus 41 ~~~~L~V~Vi~a~~L~~~---d~-~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~ 116 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSAL---LQ-QQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRV 116 (155)
T ss_dssp TTTEEEEEEEEEECGGGT---CC-SCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEE
T ss_pred CCCEEEEEEEEccCcCCc---cc-CCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEE
Confidence 456899999999999876 56 88999999999864 278999999999999999999998642 458999
Q ss_pred EEEeCCCCCCcCCCCCCCCceeEEEEEEccccc-CCCeEEEEEEee
Q 002002 657 GVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLD-TNRVYLNSYSLT 701 (983)
Q Consensus 657 ~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~ 701 (983)
+|||+|..+ +|++||++.|+|.++. .+....+||+|.
T Consensus 117 ~V~d~d~~~--------~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 117 DVCTTDRSH--------LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEECTTS--------CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEECCCCC--------CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999988 7889999999999996 466778999985
No 29
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2.2e-16 Score=154.88 Aligned_cols=105 Identities=30% Similarity=0.371 Sum_probs=92.9
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEEC---CEEEEeeeecCCCCCeeceEEEEEEec---CCCEEEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG---PKWVRTRTILDRFNPRWNEQYTWDVYD---PCTVLTIGVF 659 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~---~~~~rT~~~~~t~nP~Wne~~~~~v~~---~~~~l~i~v~ 659 (983)
..+.|.|+|++|+||+.+ |. .|.+||||++++. ....||+++++++||.|||+|.|.+.. ....|.|+||
T Consensus 40 ~~~~L~V~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 115 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPAL---DM-GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 115 (152)
T ss_dssp TTTEEEEEEEEEESCCCC---ST-TSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCc---cC-CCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEE
Confidence 346899999999999765 55 7899999999993 468899999999999999999999864 2568999999
Q ss_pred eCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeee
Q 002002 660 DNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTV 702 (983)
Q Consensus 660 D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 702 (983)
|++.++ +|++||++.|+|.++..+....+||+|..
T Consensus 116 d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 116 DFDRFS--------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp ECCSSS--------CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ECCCCC--------CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999987 78899999999999988888899999974
No 30
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=9.9e-17 Score=155.25 Aligned_cols=112 Identities=23% Similarity=0.349 Sum_probs=96.6
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEEC---CeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFD---GQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDK 81 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~ 81 (983)
..+.|.|+|++|++|+.+|..|.+||||++.+. .++++|+++++++||.|||+|.|.+...+.+....|.|+|||.+
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 457899999999999999999999999999994 37899999999999999999999864322233678999999988
Q ss_pred CCCCCCCccEEEEEECccceecCCeeeEEEEceecCC
Q 002002 82 KTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSV 118 (983)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 118 (983)
.++ ++++||++.+++..+. .+.....||+|.+.+.
T Consensus 104 ~~~-~~~~iG~~~i~l~~l~-~~~~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 104 RFS-RNDPIGEVSIPLNKVD-LTQMQTFWKDLKPSGP 138 (141)
T ss_dssp SSS-SCEEEEEEEEETTTSC-TTSCEEEEECCEECCC
T ss_pred CCC-CCcEEEEEEEEhhhhc-CCCCccEEEECcCCCC
Confidence 876 8999999999999987 4557889999998754
No 31
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=4.5e-16 Score=150.60 Aligned_cols=106 Identities=23% Similarity=0.348 Sum_probs=93.0
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEEC---CEEEEeeeecCCCCCeeceEEEEEEec----CCCEEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG---PKWVRTRTILDRFNPRWNEQYTWDVYD----PCTVLTIGV 658 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~---~~~~rT~~~~~t~nP~Wne~~~~~v~~----~~~~l~i~v 658 (983)
..+.|.|+|++|+||+.+ |. .|++||||++++. ....||+++++++||.|||+|.|.+.. ....|.|+|
T Consensus 24 ~~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 99 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAK---DF-SGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQV 99 (141)
T ss_dssp SSCCEEEEEEEEESCCCC---SS-SSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEE
T ss_pred CCCEEEEEEEEeECCCCC---CC-CCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEE
Confidence 356899999999999765 55 7899999999994 368899999999999999999998632 246899999
Q ss_pred EeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 659 FDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
||++.++ +|++||++.|+|.++..+.....||+|...
T Consensus 100 ~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 100 LDYDRFS--------RNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EECCSSS--------SCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EECCCCC--------CCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 9999987 788999999999999988888999999865
No 32
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=1.5e-16 Score=151.53 Aligned_cols=107 Identities=28% Similarity=0.497 Sum_probs=88.8
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE-----CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF-----DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|++++..|.+||||++.+ +..+++|+++++++||.|||+|.|.+.....+....|.|+|||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 45789999999999999999999999999999 3479999999999999999999999644333346799999999
Q ss_pred CCCCCCC--CCccEEEEEECccceecCCeeeEEEEce
Q 002002 80 DKKTGKR--STFLGKVKIAGSTFAKVGSESSVYYPLE 114 (983)
Q Consensus 80 ~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 114 (983)
.+..+ + +++||++.+++.++...+ ...||+|+
T Consensus 96 ~d~~~-~~~~~~lG~~~i~l~~l~~~~--~~~W~~Lq 129 (129)
T 2bwq_A 96 QARVR-EEESEFLGEILIELETALLDD--EPHWYKLQ 129 (129)
T ss_dssp C--------CEEEEEEEEEGGGCCCSS--CEEEEECC
T ss_pred CCcCc-CcCCceeEEEEEEccccCCCc--CCccEECc
Confidence 88875 5 899999999999987433 78999985
No 33
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.68 E-value=4.4e-17 Score=159.76 Aligned_cols=108 Identities=15% Similarity=0.151 Sum_probs=94.2
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC------eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG------QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLY 78 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~ 78 (983)
..+.|.|+|++|+||+++|..|.+||||++.+.. .+++|+++++|+||+|||+|.|.+... .+....|.|+||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~-~l~~~~L~~~V~ 119 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYP-ALHQKTLRVDVC 119 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHH-HHHHCEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHH-HhCcCEEEEEEE
Confidence 4578999999999999999999999999999954 379999999999999999999998652 223568999999
Q ss_pred eCCCCCCCCCccEEEEEECccceecCCeeeEEEEce
Q 002002 79 NDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLE 114 (983)
Q Consensus 79 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 114 (983)
|.+..+ ++++||++.+++.++...+.....||+|.
T Consensus 120 d~d~~~-~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 120 TTDRSH-LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EECTTS-CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred ECCCCC-CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 998886 89999999999999864456788999986
No 34
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=156.34 Aligned_cols=108 Identities=16% Similarity=0.312 Sum_probs=92.6
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~ 657 (983)
..|.|.|+|++|+||++++ +. .|++||||++.+++ ...+|+++++|+||.|||+|.|.+... ...|.|+
T Consensus 21 ~~~~L~V~v~~a~~L~~~d--~~-~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYAD--EA-KKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp TTTEEEEEEEEEESCCCSB--TT-TTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred CCCEEEEEEEEecCCCCcc--cC-CCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4578999999999997763 23 78999999999862 488999999999999999999998653 3479999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecC
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLL 704 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 704 (983)
|||+|..+ +|++||++.|+|.++..+.....||+|..+.
T Consensus 98 V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 98 VWHHGRFG--------RNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp EEEECGGG--------CEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred EEECCCCc--------CCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 99999987 7889999999999998776678999998653
No 35
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.67 E-value=2.5e-16 Score=152.85 Aligned_cols=105 Identities=30% Similarity=0.388 Sum_probs=92.7
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEE---CCEEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY---GPKWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIGVF 659 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~---~~~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~v~ 659 (983)
..|.|.|+|++|++|+.+ |. .|++||||++++ +....+|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 32 ~~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 107 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPAL---DM-GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 107 (143)
T ss_dssp TTTEEEEEEEEEECCCCB---GG-GBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCC---CC-CCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEE
Confidence 457899999999999765 45 788999999999 44689999999999999999999998643 369999999
Q ss_pred eCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeee
Q 002002 660 DNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTV 702 (983)
Q Consensus 660 D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 702 (983)
|++.++ +|++||++.|+|.++..+....+||+|..
T Consensus 108 d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 108 DFDRFS--------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp ECCSSS--------CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred eCCCCC--------CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999987 78899999999999999988899999863
No 36
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=3.5e-16 Score=148.88 Aligned_cols=103 Identities=23% Similarity=0.360 Sum_probs=84.5
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEE-----CCEEEEeeeecCCCCCeeceEEEEEEec----CCCEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY-----GPKWVRTRTILDRFNPRWNEQYTWDVYD----PCTVLTI 656 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~-----~~~~~rT~~~~~t~nP~Wne~~~~~v~~----~~~~l~i 656 (983)
..|.|.|+|++|+||+++ |. .|++||||++++ +....||+++++++||.|||+|.|.+.. ....|.|
T Consensus 16 ~~~~L~v~v~~a~~L~~~---d~-~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~ 91 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSR---ED-GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEI 91 (129)
T ss_dssp TTTEEEEEEEEEESCCCC---TT-SCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEE
T ss_pred CCCEEEEEEEEeeCCCCC---CC-CCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEE
Confidence 346899999999999765 55 789999999998 3578999999999999999999999632 2459999
Q ss_pred EEEeCCCCCCcCCCCCCC--CceeEEEEEEcccccCCCeEEEEEEee
Q 002002 657 GVFDNGRYKRDEAGKPGK--DVRVGKIRVRLSTLDTNRVYLNSYSLT 701 (983)
Q Consensus 657 ~v~D~d~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~ 701 (983)
+|||++..+ + |++||++.|+|.++.... ..+||+|.
T Consensus 92 ~V~d~d~~~--------~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 92 TLWDQARVR--------EEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEC---------------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EEEECCcCc--------CcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999999887 5 889999999999987644 68999873
No 37
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.66 E-value=4.7e-16 Score=148.88 Aligned_cols=104 Identities=17% Similarity=0.260 Sum_probs=90.9
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEE-----CCEEEEeeeecCCCCCeeceEEEEE-Eec---CCCEEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY-----GPKWVRTRTILDRFNPRWNEQYTWD-VYD---PCTVLTIG 657 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~-----~~~~~rT~~~~~t~nP~Wne~~~~~-v~~---~~~~l~i~ 657 (983)
.|.|.|+|++|+||+. +. .|.+||||++++ +....||+++++|+||+|||+|.|. +.. ....|.|+
T Consensus 19 ~~~L~V~V~~a~~L~~----~~-~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT----ED-GADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp TTEEEEEEEEEECCCC----TT-SCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred CCEEEEEEEEeeCCCC----CC-CCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 4689999999999974 34 789999999998 3468899999999999999999999 753 34699999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
|||++..+ +|++||++.|+|.++..+.....||+|...
T Consensus 94 V~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 94 VLSAESLR--------ENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp EEECCSSS--------CCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred EEECCCCC--------CCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 99999987 788999999999999988888999999753
No 38
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.66 E-value=1.7e-16 Score=154.91 Aligned_cols=112 Identities=22% Similarity=0.403 Sum_probs=94.5
Q ss_pred CCcEEEEEEEEeeCCCCCC-CCCCCCeEEEEEEC-----CeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKD-GQGTASAYVIVDFD-----GQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLY 78 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~ 78 (983)
..+.|.|+|++|++|++++ ..|.+||||++.+. ..+++|+++++++||.|||+|.|.+... .+....|.|+||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~~~L~~~V~ 99 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPES-LLAQRTLQFSVW 99 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCST-TGGGCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChh-HhCceEEEEEEE
Confidence 4578999999999999988 57899999999995 2589999999999999999999998663 334567999999
Q ss_pred eCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCc
Q 002002 79 NDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVF 119 (983)
Q Consensus 79 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~ 119 (983)
|.+.++ ++++||++.+++..+. .+.....||+|.+++..
T Consensus 100 d~d~~~-~~~~iG~~~i~l~~l~-~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 100 HHGRFG-RNTFLGEAEIQMDSWK-LDKKLDHCLPLHGKISA 138 (148)
T ss_dssp EECGGG-CEEEEEEEEEEHHHHH-HHCCSEEEEECBCC---
T ss_pred ECCCCc-CCcEEEEEEEEccccc-ccCCccceEECcCcccc
Confidence 988876 8999999999999987 34567799999988644
No 39
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.65 E-value=4.6e-16 Score=152.72 Aligned_cols=105 Identities=21% Similarity=0.258 Sum_probs=91.1
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEEC-----CEEEEeeeecCCCCCeeceEEEEEE--ecCCCEEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG-----PKWVRTRTILDRFNPRWNEQYTWDV--YDPCTVLTIGV 658 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~-----~~~~rT~~~~~t~nP~Wne~~~~~v--~~~~~~l~i~v 658 (983)
..|.|.|+|++|+||+++ | .|.+||||++.+. ....+|+++++++||.|||+|.|.+ .+....|.|+|
T Consensus 25 ~~~~L~V~v~~a~~L~~~---d--~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISK---Q--PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp SSSEEEEEEEEEESCCCC---S--SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCC---C--CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 457899999999999876 3 5789999999983 3578999999999999999999999 45556899999
Q ss_pred EeCCCCCCcCCCCCCC-CceeEEEEEEcccccC-CCeEEEEEEeeec
Q 002002 659 FDNGRYKRDEAGKPGK-DVRVGKIRVRLSTLDT-NRVYLNSYSLTVL 703 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~ 703 (983)
||++..+ + |++||++.|+|.+|.. +.....||+|...
T Consensus 100 ~d~d~~~--------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 100 WNRASQS--------RQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp EECCSSG--------GGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred EeCCCCC--------CCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9999987 4 8899999999999985 7788999999865
No 40
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=4.7e-16 Score=152.51 Aligned_cols=109 Identities=24% Similarity=0.379 Sum_probs=94.8
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE---CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF---DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDK 81 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~ 81 (983)
..+.|.|+|++|++|+.+|..|.+||||++.+ +.++++|+++++++||.|||+|.|.+... ++....|.|+|||.+
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS-ELGGKTLVMAVYDFD 118 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHH-HHTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHH-HcCCCEEEEEEEECC
Confidence 45789999999999999999999999999999 34789999999999999999999988642 223578999999988
Q ss_pred CCCCCCCccEEEEEECccceecCCeeeEEEEceec
Q 002002 82 KTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKR 116 (983)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 116 (983)
.++ ++++||++.+++..+. .+.....||+|.+.
T Consensus 119 ~~~-~~~~iG~~~i~l~~l~-~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 119 RFS-KHDIIGEFKVPMNTVD-FGHVTEEWRDLQSA 151 (152)
T ss_dssp SSS-CCEEEEEEEEEGGGCC-CSSCEEEEEECBCC
T ss_pred CCC-CCcEEEEEEEEchhcc-CCCCcceEEECCCC
Confidence 876 8999999999999986 45678899999753
No 41
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.65 E-value=3.4e-16 Score=151.92 Aligned_cols=108 Identities=24% Similarity=0.385 Sum_probs=94.9
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE---CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF---DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDK 81 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~ 81 (983)
..+.|.|+|++|++|+.++..|.+||||++.+ +.++++|+++++++||.|||+|.|.+... .+....|.|+|||.+
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS-ELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHH-HHTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHh-hcCCCEEEEEEEeCC
Confidence 46789999999999999998899999999999 44789999999999999999999998653 223578999999988
Q ss_pred CCCCCCCccEEEEEECccceecCCeeeEEEEcee
Q 002002 82 KTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEK 115 (983)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~ 115 (983)
.++ ++++||++.+++..+. .+.....||+|++
T Consensus 111 ~~~-~~~~iG~~~i~l~~l~-~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RFS-KHDIIGEFKVPMNTVD-FGHVTEEWRDLQS 142 (143)
T ss_dssp SSS-CCEEEEEEEEEGGGCC-TTSCEEEEEECBC
T ss_pred CCC-CCceEEEEEEEHHHcc-CCCCcceEEECcC
Confidence 886 8999999999999987 5667889999975
No 42
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=8.3e-16 Score=148.12 Aligned_cols=111 Identities=17% Similarity=0.265 Sum_probs=94.4
Q ss_pred CCcEEEEEEEEeeCCCCCCCC-CCCCeEEEEEEC---CeEEeeeCcCCCCCCeeeeEEEEE-eeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQ-GTASAYVIVDFD---GQRRRTKTKFRDLNPQWDERLEFL-VHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~-g~~dPyv~v~~~---~~~~~T~~~~~t~nP~WnE~f~f~-v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+++|.. |.+||||++.+. .++++|+++++++||+|||+|.|. +.. ..+....|.|+|||
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~-~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY-TQIQELALHFTILS 98 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCS-TTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCH-HHhccCEEEEEEEE
Confidence 357899999999999999985 899999999995 379999999999999999999996 543 33446799999999
Q ss_pred CCCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
.+.++ ++++||++.+++..+.........|++|.++.
T Consensus 99 ~d~~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 99 FDRFS-RDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp ECSSC-CCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred CCCCC-CCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 88876 89999999999999975445556789998764
No 43
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=1e-15 Score=147.51 Aligned_cols=105 Identities=21% Similarity=0.330 Sum_probs=87.4
Q ss_pred cEEEEEEEceeccccccccCCCCC-CCCCcEEEEEECC---EEEEeeeecCCCCCeeceEEEEE-Eec---CCCEEEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTR-GTTDAYVVAKYGP---KWVRTRTILDRFNPRWNEQYTWD-VYD---PCTVLTIGV 658 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~-g~sDpy~~~~~~~---~~~rT~~~~~t~nP~Wne~~~~~-v~~---~~~~l~i~v 658 (983)
.|.|.|+|++|+||+++ |. . |++||||++++.+ ...||+++++++||+|||+|.|. +.. ....|.|+|
T Consensus 21 ~~~L~v~v~~a~~L~~~---d~-~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAM---DE-QSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp GTEEEEEEEEEESCCCC---BT-TTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCC---CC-CCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 46899999999999776 44 4 8899999999953 78999999999999999999996 543 235899999
Q ss_pred EeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCe-EEEEEEeeec
Q 002002 659 FDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRV-YLNSYSLTVL 703 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~-~~~~~~L~~~ 703 (983)
||++.++ +|++||++.|+|.++..+.. ...|++|...
T Consensus 97 ~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 97 LSFDRFS--------RDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EEECSSC--------CCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred EECCCCC--------CCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 9999987 68899999999999976543 3456777654
No 44
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=3.1e-16 Score=151.79 Aligned_cols=111 Identities=27% Similarity=0.487 Sum_probs=95.1
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE-----CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF-----DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+.+|..|.+||||++.+ ..++++|+++++++||+|||+|.|.+.....+....|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 45789999999999999999999999999999 3478999999999999999999999644333446899999999
Q ss_pred CCCCCCC--CCccEEEEEECccceecCCeeeEEEEceecCC
Q 002002 80 DKKTGKR--STFLGKVKIAGSTFAKVGSESSVYYPLEKRSV 118 (983)
Q Consensus 80 ~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 118 (983)
.+..+ + +++||++.+++..+... ....||+|.+...
T Consensus 99 ~d~~~-~~~~~~lG~~~i~l~~l~~~--~~~~W~~L~~~~~ 136 (141)
T 1v27_A 99 QARVR-EEESEFLGEILIELETALLD--DEPHWYKLQTHDS 136 (141)
T ss_dssp BCSSS-SCCBCCCEEEEEEGGGCCCS--SEEEEEECBCCSS
T ss_pred CCCCc-CCCCceEEEEEEEccccCCC--CCCceEECccccc
Confidence 88875 5 89999999999998743 2789999987753
No 45
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=4.5e-16 Score=150.64 Aligned_cols=105 Identities=23% Similarity=0.340 Sum_probs=90.1
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEE-----CCEEEEeeeecCCCCCeeceEEEEEEec----CCCEEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY-----GPKWVRTRTILDRFNPRWNEQYTWDVYD----PCTVLTIG 657 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~-----~~~~~rT~~~~~t~nP~Wne~~~~~v~~----~~~~l~i~ 657 (983)
.+.|.|+|++|++|+++ |. .|++||||++++ +....||+++++++||+|||+|.|.+.. ....|.|+
T Consensus 20 ~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSR---ED-GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp TTEEEEEEEEEESCCCC---SS-SCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred CCEEEEEEEEccCCCCc---CC-CCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 46899999999999776 55 789999999998 3578899999999999999999999532 23699999
Q ss_pred EEeCCCCCCcCCCCCCC--CceeEEEEEEcccccCCCeEEEEEEeeecC
Q 002002 658 VFDNGRYKRDEAGKPGK--DVRVGKIRVRLSTLDTNRVYLNSYSLTVLL 704 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 704 (983)
|||++..+ + |++||++.|+|.++.... ..+||+|....
T Consensus 96 V~d~d~~~--------~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 96 LWDQARVR--------EEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp EEEBCSSS--------SCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred EEECCCCc--------CCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 99999987 4 889999999999987654 78999998653
No 46
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=1.3e-15 Score=146.59 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=88.3
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEEC---C-EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG---P-KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIGV 658 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~---~-~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~v 658 (983)
..+.|.|+|++|++. |. .|++||||++.+. + ...||+++++|+||+|||+|.|.+... ...|.|+|
T Consensus 24 ~~~~L~V~v~~a~~~------d~-~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V 96 (138)
T 1wfm_A 24 QKAELFVTRLEAVTS------NH-DGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTL 96 (138)
T ss_dssp TTTEEEEEEEEEECC------CC-SSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEE
T ss_pred CCCEEEEEEEEEEcC------CC-CCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEE
Confidence 346899999999942 55 8899999999983 2 468999999999999999999998643 45899999
Q ss_pred EeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 659 FDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
||+|.++ +|++||++.|+|.++..+....+||+|...
T Consensus 97 ~d~d~~~--------~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 97 RTCDRFS--------RHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp EECCSSC--------TTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred EECCCCC--------CCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 9999987 788999999999999766667899999854
No 47
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.64 E-value=8.1e-16 Score=148.00 Aligned_cols=108 Identities=31% Similarity=0.563 Sum_probs=94.1
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE-----CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF-----DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+.++..|.+||||++.+ +..+++|+++++++||.|||+|.|.+...+. ...|.|+|||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~--~~~l~i~v~d 91 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDK--DRRLSVEIWD 91 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGG--GCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhc--CCEEEEEEEE
Confidence 35789999999999999999999999999999 4578999999999999999999999875421 4579999999
Q ss_pred CCCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
.+..+ ++++||++.+++.++... . ...||+|.+..
T Consensus 92 ~d~~~-~~~~iG~~~i~l~~l~~~-~-~~~W~~L~~~~ 126 (137)
T 3rdl_A 92 WDRTT-RNDFMGSLSFGVSELMKM-P-ASGWYKLLNQE 126 (137)
T ss_dssp CCSSS-CCEEEEEEEEEHHHHHHS-C-EEEEEECBCHH
T ss_pred CCCCC-CCceEEEEEEeHHHhccC-c-cCceEECcCcc
Confidence 88876 899999999999999743 3 78999998763
No 48
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=8.1e-16 Score=149.02 Aligned_cols=107 Identities=22% Similarity=0.330 Sum_probs=89.7
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~ 657 (983)
..|.|.|+|++|+||+++ |. .| +||||++++.+ ...||+++++|+||+|||+|.|.+... ...|.|+
T Consensus 22 ~~~~L~v~v~~a~~L~~~---d~-~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 96 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAF---SE-DG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVA 96 (142)
T ss_dssp TTTEEEEEEEEEECCCCS---ST-TC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEE
T ss_pred CCCEEEEEEEEeECCCCC---CC-CC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEE
Confidence 346899999999999776 55 77 99999999842 578999999999999999999998532 3589999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
|||++.+++ ..|++||++.|+|.++..+....+||+|...
T Consensus 97 V~d~d~~~~------~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 97 VKNSGGFLS------KDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp EEECCCSSC------CSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred EEECCCccc------cCCcEEEEEEEecccccccccccceeeccCC
Confidence 999998761 0246999999999999877777899999854
No 49
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=1.2e-16 Score=154.79 Aligned_cols=109 Identities=28% Similarity=0.525 Sum_probs=93.1
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCe--------------EEeeeCcCCCCCCeeeeEEEEE-eeecCCCCC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQ--------------RRRTKTKFRDLNPQWDERLEFL-VHDAESMPT 70 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~--------------~~~T~~~~~t~nP~WnE~f~f~-v~~~~~l~~ 70 (983)
.+.|.|+|++|++|+++|..|.+||||++.+.+. +++|+++++++||.|||+|.|. +.. +++..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~-~~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISM-EQLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCH-HHHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCH-HHccC
Confidence 3689999999999999999999999999999762 5789999999999999999997 543 22236
Q ss_pred ceEEEEEEeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 71 EILEINLYNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 71 ~~L~v~V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
..|.|+|||.+..+ ++++||++.+++..+. .+.....||+|.+++
T Consensus 96 ~~l~i~V~d~d~~~-~~~~lG~~~i~l~~l~-~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 96 KTLEVTVWDYDRFS-SNDFLGEVLIDLSSTS-HLDNTPRWYPLKEQT 140 (142)
T ss_dssp CEEEEEEEEECSSS-CEEEEEEEEEETTSCG-GGTTCCEEEECBCCC
T ss_pred CEEEEEEEECCCCC-CCceEEEEEEeccccc-cCCCCCeEEECCccC
Confidence 79999999988876 8999999999999987 345677999998764
No 50
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.63 E-value=2.6e-16 Score=152.47 Aligned_cols=104 Identities=26% Similarity=0.387 Sum_probs=90.1
Q ss_pred EEEEEEEceeccccccccCCCCCCCCCcEEEEEECCE--------------EEEeeeecCCCCCeeceEEEEE-Eec---
Q 002002 588 GLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPK--------------WVRTRTILDRFNPRWNEQYTWD-VYD--- 649 (983)
Q Consensus 588 g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~--------------~~rT~~~~~t~nP~Wne~~~~~-v~~--- 649 (983)
|.|.|+|++|+||+++ |. .|++||||++++++. ..||+++++|+||.|||+|.|. +..
T Consensus 18 ~~L~V~v~~a~~L~~~---d~-~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l 93 (142)
T 1rh8_A 18 GNLIIHILQARNLVPR---DN-NGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQL 93 (142)
T ss_dssp TEEEEEEEEEESCCCC---SS-SSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHH
T ss_pred CEEEEEEEEecCCCCC---CC-CCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHc
Confidence 5799999999999776 55 789999999999762 4799999999999999999997 532
Q ss_pred CCCEEEEEEEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 650 PCTVLTIGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 650 ~~~~l~i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
....|.|+|||++..+ +|++||++.|+|.++..+.....||+|...
T Consensus 94 ~~~~l~i~V~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFS--------SNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TTCEEEEEEEEECSSS--------CEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred cCCEEEEEEEECCCCC--------CCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 3569999999999987 788999999999999876667899999854
No 51
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.63 E-value=1.3e-15 Score=147.49 Aligned_cols=104 Identities=28% Similarity=0.425 Sum_probs=89.8
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEE-EecC---CCEEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWD-VYDP---CTVLTIG 657 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~-v~~~---~~~l~i~ 657 (983)
.|.|.|+|++|+||+++ |. .|++||||++++++ ...||+++++++||.|||+|.|. +... ...|.|+
T Consensus 28 ~~~L~V~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPM---DS-NGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp GTEEEEEEEEEESCCCC---CT-TSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred CCEEEEEEEEecCCCCC---CC-CCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 46899999999999776 55 78999999999965 78999999999999999999998 5322 2589999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeee
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTV 702 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 702 (983)
|||++..+ +|++||++.|+|.++..+.....|++|..
T Consensus 104 V~d~d~~~--------~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 104 VCDEDKFG--------HNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEECTTS--------CEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEECCCCC--------CCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999987 78899999999999998887677777753
No 52
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.63 E-value=1.5e-15 Score=149.11 Aligned_cols=111 Identities=21% Similarity=0.347 Sum_probs=92.9
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEEC-----CeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFD-----GQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+++| .|.+||||++.+. ..+++|+++++++||.|||+|.|.+...+ + ...|.|+|||
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~-~~~L~i~V~d 101 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEED-D-QKRLLVTVWN 101 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGG-T-TSEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHH-h-CCEEEEEEEe
Confidence 4678999999999999999 6999999999992 36799999999999999999999985422 2 3469999999
Q ss_pred CCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCC
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSV 118 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 118 (983)
.+.+++.|+|||++.+++..+...+.....||+|.+...
T Consensus 102 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 102 RASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp CCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred CCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 888762389999999999998744577889999987643
No 53
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=2.1e-15 Score=145.16 Aligned_cols=107 Identities=21% Similarity=0.334 Sum_probs=91.5
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEEC---C-eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFD---G-QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYND 80 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~-~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~ 80 (983)
..+.|.|+|++|+ ++|..|.+||||++.+. + .+++|+++++++||+|||+|.|.+.. .++....|.|.|||.
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~-~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAE-EELPTATLTLTLRTC 99 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCT-TSSTTCEEEEEEEEC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecH-HHcCCCEEEEEEEEC
Confidence 4679999999999 46788999999999993 3 46899999999999999999999865 344567899999998
Q ss_pred CCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 81 KKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
+.++ ++++||++.+++..+. .+.....|++|.+..
T Consensus 100 d~~~-~dd~lG~~~i~l~~l~-~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 100 DRFS-RHSVAGELRLGLDGTS-VPLGAAQWGELKTSG 134 (138)
T ss_dssp CSSC-TTSCSEEEEEESSSSS-SCTTCCEEEECCCCS
T ss_pred CCCC-CCcEEEEEEEEccccc-CcccccceeeCcCCC
Confidence 8886 8999999999999986 345678999998764
No 54
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.63 E-value=8.6e-16 Score=147.82 Aligned_cols=103 Identities=29% Similarity=0.452 Sum_probs=90.8
Q ss_pred EEEEEEEceeccccccccCCCCCCCCCcEEEEEE-----CCEEEEeeeecCCCCCeeceEEEEEEecC--CCEEEEEEEe
Q 002002 588 GLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY-----GPKWVRTRTILDRFNPRWNEQYTWDVYDP--CTVLTIGVFD 660 (983)
Q Consensus 588 g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~-----~~~~~rT~~~~~t~nP~Wne~~~~~v~~~--~~~l~i~v~D 660 (983)
|.|.|+|++|+||+++ |. .|++||||++++ +....+|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 16 ~~L~v~v~~a~~L~~~---d~-~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d 91 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPM---DP-NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWD 91 (137)
T ss_dssp TEEEEEEEEEESCCCC---ST-TSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCC---CC-CCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEE
Confidence 5899999999999765 55 789999999999 45789999999999999999999998643 3589999999
Q ss_pred CCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 661 NGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 661 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
++..+ +|++||.+.|+|+++..+. ..+||+|...
T Consensus 92 ~d~~~--------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 92 WDRTT--------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CCSSS--------CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCC--------CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 99987 7889999999999997655 6899999865
No 55
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.63 E-value=3.3e-15 Score=147.64 Aligned_cols=106 Identities=26% Similarity=0.315 Sum_probs=89.6
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~ 657 (983)
..|.|.|+|++|+||+++ |. .|.+||||++++++ ...||+++++++||.|||+|.|.+... ...|.|+
T Consensus 23 ~~~~L~V~v~~a~~L~~~---d~-~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~ 98 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKM---DV-GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVT 98 (159)
T ss_dssp TTTEEEEEEEEEESCCCC---ST-TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred CCCEEEEEEEEeeCCCCc---cC-CCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEE
Confidence 457899999999999776 55 78999999999852 478999999999999999999998643 3589999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccc------------cCCCeEEEEEEeeec
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTL------------DTNRVYLNSYSLTVL 703 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 703 (983)
|||++.++ +|++||.+.|++..+ ..+.....||+|...
T Consensus 99 V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 99 VLDYDKIG--------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp EEECCSSS--------CCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred EEECCCCC--------CCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 99999987 788999999999853 235577889988754
No 56
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=8.6e-16 Score=153.66 Aligned_cols=107 Identities=23% Similarity=0.361 Sum_probs=92.6
Q ss_pred CcEEEEEEEEeeCCCCCCC-CCCCCeEEEEEECC-----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEE-
Q 002002 6 NRKLIVEVCNAKNLMPKDG-QGTASAYVIVDFDG-----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLY- 78 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~-~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~- 78 (983)
.+.|.|+|++|++|+++|. .|.+||||+|.+.. .+++|+++++++||+|||+|.|.+... ...|.|+||
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~----~~~L~~~V~~ 104 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ----GKVLQVIVWG 104 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT----TEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC----CCEEEEEEEE
Confidence 4789999999999999995 79999999999853 388999999999999999999998543 689999999
Q ss_pred eCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCC
Q 002002 79 NDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSV 118 (983)
Q Consensus 79 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 118 (983)
|.+.++ ++++||++.+++..+. .+.....||+|.+...
T Consensus 105 d~d~~~-~d~~iG~~~i~l~~l~-~~~~~~~W~~L~~~~~ 142 (171)
T 2q3x_A 105 DYGRMD-HKCFMGVAQILLEELD-LSSMVIGWYKLFPPSS 142 (171)
T ss_dssp ECSTTC-SSEEEEEEEECGGGSC-TTSCEEEEEECBCGGG
T ss_pred cCCCCC-CCCEEEEEEEEHHHcc-cCCCcceeEECCCccc
Confidence 888776 8899999999999987 4567889999988753
No 57
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=1e-15 Score=149.58 Aligned_cols=103 Identities=26% Similarity=0.409 Sum_probs=90.8
Q ss_pred EEEEEEEceeccccccccCCCCCCCCCcEEEEEEC-----CEEEEeeeecCCCCCeeceEEEEEEecC--CCEEEEEEEe
Q 002002 588 GLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYG-----PKWVRTRTILDRFNPRWNEQYTWDVYDP--CTVLTIGVFD 660 (983)
Q Consensus 588 g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~-----~~~~rT~~~~~t~nP~Wne~~~~~v~~~--~~~l~i~v~D 660 (983)
|.|.|+|++|+||+++ |. .|++||||+++++ ....||+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 31 ~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d 106 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPM---DP-NGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 106 (149)
T ss_dssp SEEEEEEEEEESCCCC---ST-TSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCC---CC-CCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEE
Confidence 5799999999999766 55 7899999999996 3688999999999999999999999753 4589999999
Q ss_pred CCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 661 NGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 661 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
++..+ +|++||++.|+|.++..+. ..+||+|...
T Consensus 107 ~d~~~--------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 140 (149)
T 1a25_A 107 WDLTS--------RNDFMGSLSFGISELQKAG-VDGWFKLLSQ 140 (149)
T ss_dssp CCSSS--------CCEEEEEEEEEHHHHTTCC-EEEEEECBCH
T ss_pred CCCCC--------CCCEEEEEEEEHHHhCcCc-cCCeEEccCC
Confidence 99987 7889999999999998764 6899999864
No 58
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.62 E-value=6.8e-16 Score=154.42 Aligned_cols=105 Identities=25% Similarity=0.337 Sum_probs=91.7
Q ss_pred EEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEEEecCCCEEEEEEE-eC
Q 002002 588 GLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWDVYDPCTVLTIGVF-DN 661 (983)
Q Consensus 588 g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~-D~ 661 (983)
|.|.|+|++|+||+++ |...|.+||||++++.+ ...||+++++|+||+|||+|.|.+......|.|+|| |+
T Consensus 30 ~~L~V~v~~a~~L~~~---d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQK---PGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp TEEEEEEEEEESCCCC---C---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 5899999999999776 42158899999999853 378999999999999999999999766679999999 99
Q ss_pred CCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 662 GRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 662 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
|.++ +|++||++.|+|.++..+....+||+|...
T Consensus 107 d~~~--------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMD--------HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTC--------SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCC--------CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9987 788999999999999888888999999865
No 59
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=1.4e-15 Score=148.58 Aligned_cols=106 Identities=28% Similarity=0.508 Sum_probs=92.7
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEEC-----CeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFD-----GQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYND 80 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~ 80 (983)
...|.|+|++|++|+.+|..|.+||||++.+. ..+++|+++++++||.|||+|.|.+...+. ...|.|+|||.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~--~~~L~i~V~d~ 107 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDK--DRRLSVEIWDW 107 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGG--GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccC--CCEEEEEEEEC
Confidence 46799999999999999999999999999996 368999999999999999999999875321 46899999998
Q ss_pred CCCCCCCCccEEEEEECccceecCCeeeEEEEceec
Q 002002 81 KKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKR 116 (983)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 116 (983)
+..+ ++++||++.+++..+... ....||+|.+.
T Consensus 108 d~~~-~~~~iG~~~i~l~~l~~~--~~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLTS-RNDFMGSLSFGISELQKA--GVDGWFKLLSQ 140 (149)
T ss_dssp CSSS-CCEEEEEEEEEHHHHTTC--CEEEEEECBCH
T ss_pred CCCC-CCCEEEEEEEEHHHhCcC--ccCCeEEccCC
Confidence 8876 899999999999998732 47789999865
No 60
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.62 E-value=2.6e-15 Score=144.65 Aligned_cols=92 Identities=27% Similarity=0.329 Sum_probs=80.6
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEEEecCC---CEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWDVYDPC---TVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~v~~~~---~~l~i~ 657 (983)
..|.|.|+|++|+||+.+ |. .|++||||++++++ ...+|+++++++||.|||+|.|.+.... ..|.|+
T Consensus 14 ~~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~ 89 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAM---DI-GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT 89 (138)
T ss_dssp TTTEEEEEEEEEESCCCC---BT-TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCc---CC-CCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEE
Confidence 457899999999999776 55 78999999999863 4789999999999999999999986544 589999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEccccc
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLD 689 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~ 689 (983)
|||++..+ +|++||++.|+|.++.
T Consensus 90 V~d~~~~~--------~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 90 VMDKDKLS--------RNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEECCSSS--------CCEEEEEEEESSSSCH
T ss_pred EEECCCCC--------CCcEEEEEEEccccCC
Confidence 99999987 7889999999999764
No 61
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.62 E-value=9.6e-16 Score=148.48 Aligned_cols=109 Identities=27% Similarity=0.455 Sum_probs=93.4
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC-----eEEeeeCcCCCCCCeeeeEEEEE-eeecCCCCCceEEEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG-----QRRRTKTKFRDLNPQWDERLEFL-VHDAESMPTEILEINLY 78 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~WnE~f~f~-v~~~~~l~~~~L~v~V~ 78 (983)
..+.|.|+|++|++|+.++..|.+||||++.+.+ .+++|+++++++||.|||+|.|. +... ++....|.|+||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~-~~~~~~l~i~V~ 105 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEE-DMQRKTLRISVC 105 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHH-HHHHCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHH-HccCCEEEEEEE
Confidence 4578999999999999999999999999999964 78999999999999999999998 5432 122368999999
Q ss_pred eCCCCCCCCCccEEEEEECccceecCCeeeEEEEceec
Q 002002 79 NDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKR 116 (983)
Q Consensus 79 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 116 (983)
|.+..+ ++++||++.+++..+. .+.....|++|++.
T Consensus 106 d~d~~~-~d~~iG~~~i~l~~l~-~~~~~~~~~~L~~p 141 (142)
T 2chd_A 106 DEDKFG-HNEFIGETRFSLKKLK-ANQRKNFNICLERV 141 (142)
T ss_dssp EECTTS-CEEEEEEEEEEGGGCC-TTCCEEEEEECBCC
T ss_pred ECCCCC-CCcEEEEEEEEHHHcC-CCCccEEEEecccC
Confidence 988876 7899999999999987 55677888998764
No 62
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=148.69 Aligned_cols=109 Identities=19% Similarity=0.190 Sum_probs=90.4
Q ss_pred CcEEEEEEEceecccccc-ccC---CCCCCCCCcEEEEEEC---CEEEEeeeecCCCCCeeceEEEEEEecC---CCEEE
Q 002002 586 PIGLLEVGIRGATNLLPV-KTK---DGTRGTTDAYVVAKYG---PKWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLT 655 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~-~~~---d~~~g~sDpy~~~~~~---~~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~ 655 (983)
..|.|.|+|++|+||+.+ +.. +. .|++||||++++. ....||+++++++||+|||+|.|.+... ...|.
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~-~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQD-MAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCT-TCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCEEEEEEEEEeCCCCcccccccccc-CCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 457899999999999873 211 22 4689999999986 3578999999999999999999998642 35899
Q ss_pred EEEEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 656 IGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 656 i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
|+|||++.++ +|++||++.|+|.++..+.....|++|...
T Consensus 103 ~~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 103 LTVVDFDKFS--------RHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEEECCSTTC--------CSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEEECCCCc--------CCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999987 678999999999999876666788888754
No 63
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.62 E-value=5.2e-15 Score=147.34 Aligned_cols=92 Identities=26% Similarity=0.374 Sum_probs=81.1
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~ 657 (983)
..|.|.|+|++|+||+++ |. .|++||||++++++ ...||+++++++||.|||+|.|.+... ...|.|+
T Consensus 35 ~~~~L~V~v~~a~~L~~~---d~-~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 110 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAM---DA-NGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDIS 110 (166)
T ss_dssp TTTEEEEEEEEEESCCCC---ST-TSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred CCCEEEEEEEEeECCCCc---cC-CCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEE
Confidence 456899999999999776 55 78999999999975 688999999999999999999999642 4599999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEccccc
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLD 689 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~ 689 (983)
|||++..+ +|++||.+.|+|.++.
T Consensus 111 V~d~d~~~--------~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 111 VWDYDIGK--------SNDYIGGCQLGISAKG 134 (166)
T ss_dssp EEECCSSS--------CCEEEEEEEEETTCCH
T ss_pred EEECCCCC--------CCcEEEeEEEecccCC
Confidence 99999987 7889999999999863
No 64
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=1.3e-15 Score=147.67 Aligned_cols=111 Identities=26% Similarity=0.363 Sum_probs=92.9
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC-----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG-----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+++|..| +||||++.+.. .+++|+++++++||.|||+|.|.+... ++....|.|+|||
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~L~i~V~d 99 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLP-EVQRRTLDVAVKN 99 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHH-HHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHH-HhCcCEEEEEEEE
Confidence 4578999999999999999999 99999999932 688999999999999999999998542 1224589999999
Q ss_pred CCCCCCC-CCccEEEEEECccceecCCeeeEEEEceecCC
Q 002002 80 DKKTGKR-STFLGKVKIAGSTFAKVGSESSVYYPLEKRSV 118 (983)
Q Consensus 80 ~~~~~~~-d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~ 118 (983)
.+.++++ +++||++.+++..+. .+.....||+|.+.+.
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~-~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEE-LAKGWTQWYDLTEDSG 138 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCST-TTTCBCCBCCCBCSCS
T ss_pred CCCccccCCcEEEEEEEeccccc-ccccccceeeccCCCC
Confidence 8877533 579999999999986 3346788999987753
No 65
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=1.1e-14 Score=135.51 Aligned_cols=122 Identities=21% Similarity=0.269 Sum_probs=105.6
Q ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcC-CCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCC
Q 002002 4 SCNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKF-RDLNPQWDERLEFLVHDAESMPTEILEINLYNDKK 82 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~ 82 (983)
+..+-|+|+|.+|.+|+ |++|||+++.|.+.+++|++++ +++||+|||.|+|.+..+ ...+..|.|.|||.++
T Consensus 18 ~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~-ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 18 GSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASS-IDRNEVLEIQIFNYSK 91 (144)
T ss_dssp -CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSC-CCTTCEEEEEEEEECT
T ss_pred CCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCC-CCCCCEEEEEEEECcc
Confidence 45577999999999998 5899999999999999999998 699999999999999873 4568899999999999
Q ss_pred CCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEec
Q 002002 83 TGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYID 134 (983)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~ 134 (983)
++ ++++||++.++|.++... .....+-+|.+.+.. .+.++|.+.+.|.+
T Consensus 92 v~-~nrlIG~~~i~Lq~lv~~-~~l~l~~~LvD~n~~-~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 92 VF-SNKLIGTFRMVLQKVVEE-NRVEVSDTLIDDNNA-IIKTSLSMEVRYQA 140 (144)
T ss_dssp TS-CCEEEEEEEEESHHHHHH-SEEEEEEEEECTTSC-EEEEEEEEEEEEEE
T ss_pred cc-CCCEEEEEEEEhHHhccC-CeEEEeecccCCCCC-ccccEEEEEEEecC
Confidence 97 899999999999999843 455567888887655 35699999999985
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.60 E-value=4.5e-15 Score=147.79 Aligned_cols=94 Identities=18% Similarity=0.359 Sum_probs=83.7
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC-----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG-----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+.+|..|.+||||++.+.+ .+++|+++++++||.|||+|.|.+... .+....|.|+|||
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~L~i~V~d 113 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHS-DLAKKSLDISVWD 113 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGG-GGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchH-hcCCCEEEEEEEE
Confidence 4578999999999999999999999999999965 689999999999999999999998653 2335699999999
Q ss_pred CCCCCCCCCccEEEEEECccc
Q 002002 80 DKKTGKRSTFLGKVKIAGSTF 100 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l 100 (983)
.+.++ ++++||++.+++..+
T Consensus 114 ~d~~~-~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 114 YDIGK-SNDYIGGCQLGISAK 133 (166)
T ss_dssp CCSSS-CCEEEEEEEEETTCC
T ss_pred CCCCC-CCcEEEeEEEecccC
Confidence 88876 899999999999975
No 67
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=147.85 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=91.5
Q ss_pred CCcEEEEEEEEeeCCCCC-CC------CCCCCeEEEEEEC---CeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEE
Q 002002 5 CNRKLIVEVCNAKNLMPK-DG------QGTASAYVIVDFD---GQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILE 74 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~-d~------~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~ 74 (983)
..+.|.|+|++|++|+.+ |. .|.+||||+|.+. .++++|+++++++||+|||+|.|.+... .+....|.
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~L~ 102 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFL-EAQRRTLL 102 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHH-HHHHSEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChH-HhccCEEE
Confidence 457899999999999984 43 3589999999995 3688999999999999999999998652 12246899
Q ss_pred EEEEeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 75 INLYNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 75 v~V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
|+|||.+.++ ++++||++.+++..+. .+.....|+.|.+++
T Consensus 103 ~~V~d~d~~~-~~~~iG~~~i~l~~l~-~~~~~~~w~~L~~~~ 143 (147)
T 2enp_A 103 LTVVDFDKFS-RHCVIGKVSVPLCEVD-LVKGGHWWKALIPSG 143 (147)
T ss_dssp EEEECCSTTC-CSCCCEEEEEETTTSC-TTTCCCEEECCBCCC
T ss_pred EEEEECCCCc-CCcEEEEEEEechhcC-CCCCccEEEEeecCC
Confidence 9999988876 7899999999999987 334567899999764
No 68
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.59 E-value=5.8e-15 Score=145.92 Aligned_cols=111 Identities=23% Similarity=0.313 Sum_probs=93.3
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC-----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG-----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|+||+.+|..|.+||||++.+.+ .+++|+++++++||.|||+|.|.+... ++....|.|+|||
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~l~i~V~d 101 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE-QIQKVQVVVTVLD 101 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGG-GGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHH-HhCCcEEEEEEEE
Confidence 4579999999999999999999999999999952 578999999999999999999998653 2335689999999
Q ss_pred CCCCCCCCCccEEEEEECccc----------e-ecCCeeeEEEEceecC
Q 002002 80 DKKTGKRSTFLGKVKIAGSTF----------A-KVGSESSVYYPLEKRS 117 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l----------~-~~~~~~~~w~~L~~~~ 117 (983)
.+.++ ++++||++.+++..+ . ..+....+||+|.+..
T Consensus 102 ~d~~~-~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 102 YDKIG-KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp CCSSS-CCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred CCCCC-CCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 88876 899999999999853 2 2245667999998764
No 69
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=5e-15 Score=140.79 Aligned_cols=117 Identities=21% Similarity=0.314 Sum_probs=86.7
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeeceEEEEEEecCCCEEEEEEEeCCCC
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIL-DRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRY 664 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~-~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~~ 664 (983)
.+|.|.|+|++|++|+. .|++||||+++ + +..+|++++ +++||.|||+|.|.+.++...|.|+|||+| .
T Consensus 3 ~~~~L~V~V~~A~~l~~-------~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA-------QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC-------GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC-------CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-C
Confidence 46899999999998831 67899999999 3 344676665 699999999999999888889999999999 7
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCCC--eEEEEEEeeec--CCCC----C--ccceEEEEEEEE
Q 002002 665 KRDEAGKPGKDVRVGKIRVRLSTLDTNR--VYLNSYSLTVL--LPGG----A--KKMGEIEIAVRF 720 (983)
Q Consensus 665 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~--~~~~~~~L~~~--~~~g----~--~~~G~l~l~~~f 720 (983)
+ +|++||++.|+|.++.... ....|.++... ...| . ...+.+.+.++|
T Consensus 73 ~--------~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 73 I--------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp S--------CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred C--------CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 6 7889999999999985322 11245544422 1122 1 113558888887
No 70
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.58 E-value=7e-15 Score=141.58 Aligned_cols=95 Identities=26% Similarity=0.406 Sum_probs=83.3
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC-----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG-----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+.+|..|.+||||++.+.+ .+++|+++++++||.|||+|.|.+... .+....|.|+|||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~-~l~~~~l~~~V~d 92 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTE-KLRETTIIITVMD 92 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGG-GGGGEEEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChh-hcCceEEEEEEEE
Confidence 4678999999999999999999999999999963 588999999999999999999998653 2334689999999
Q ss_pred CCCCCCCCCccEEEEEECccce
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFA 101 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~ 101 (983)
.+..+ ++++||++.+++..+.
T Consensus 93 ~~~~~-~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 93 KDKLS-RNDVIGKIYLSWKSGP 113 (138)
T ss_dssp CCSSS-CCEEEEEEEESSSSCH
T ss_pred CCCCC-CCcEEEEEEEccccCC
Confidence 88876 8999999999998643
No 71
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.58 E-value=1.3e-14 Score=142.47 Aligned_cols=103 Identities=18% Similarity=0.156 Sum_probs=80.6
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEE--CCE---EEEeeeecCCCCCeeceEEEEEEecCC---CEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY--GPK---WVRTRTILDRFNPRWNEQYTWDVYDPC---TVLTIG 657 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~--~~~---~~rT~~~~~t~nP~Wne~~~~~v~~~~---~~l~i~ 657 (983)
..|.|.|+|++|+||+.+ |. .|++||||++++ ++. ..||+++++++||.|||+|.|.+.... ..|.|+
T Consensus 28 ~~~~L~v~v~~a~~L~~~---d~-~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~ 103 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKS---DV-SGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103 (153)
T ss_dssp TTTEEEEEEEEEESCC----------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred CCCEEEEEEEEeECCCCc---CC-CCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEE
Confidence 457899999999999766 55 788999999998 333 679999999999999999999987542 589999
Q ss_pred EEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeee
Q 002002 658 VFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTV 702 (983)
Q Consensus 658 v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 702 (983)
|||++.++ +|++||++.|+|++. +..+.+||+|..
T Consensus 104 V~d~d~~~--------~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 104 VLDSERGS--------RNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp EEECCTTS--------CCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred EEeCCCCC--------CCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 99999987 788999999999883 233355555543
No 72
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.57 E-value=1.4e-14 Score=142.23 Aligned_cols=106 Identities=20% Similarity=0.312 Sum_probs=82.2
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE--CCe---EEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEe
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF--DGQ---RRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYN 79 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~---~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~ 79 (983)
..+.|.|+|++|++|+.+|..|.+||||++.+ ++. +++|+++++++||.|||+|.|.+... .+....|.|+|||
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~l~~~~l~v~V~d 106 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE-SLEEISVEFLVLD 106 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS-SSTTEEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH-HhCceEEEEEEEe
Confidence 45789999999999999999999999999999 443 77999999999999999999998663 3445789999999
Q ss_pred CCCCCCCCCccEEEEEECccceecCCeeeEEEEcee
Q 002002 80 DKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEK 115 (983)
Q Consensus 80 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~ 115 (983)
.+.++ ++++||++.+++... +.....|+.|..
T Consensus 107 ~d~~~-~~~~lG~~~i~l~~~---~~~~~~W~~l~~ 138 (153)
T 1w15_A 107 SERGS-RNEVIGRLVLGATAE---GSGGGHWKEICD 138 (153)
T ss_dssp CCTTS-CCEEEEEEEESTTCC---SHHHHHHHHHHH
T ss_pred CCCCC-CCcEEEEEEECCCCC---chHHHHHHHHHh
Confidence 88876 899999999999882 233444555544
No 73
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=5.6e-15 Score=140.42 Aligned_cols=87 Identities=24% Similarity=0.258 Sum_probs=72.8
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcC-CCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCCC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKF-RDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKTG 84 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~~ 84 (983)
.+.|.|+|++|++|.. .|.+||||+++ ++..+|++++ +++||.|||+|.|.+... ...|.|+|||.+ .+
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~----~~~L~~~V~D~d-~~ 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL----DLGLTVEVWNKG-LI 73 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC----SSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC----CCeEEEEEEECC-CC
Confidence 5799999999998852 67899999999 4444565554 799999999999999764 567999999988 65
Q ss_pred CCCCccEEEEEECccceec
Q 002002 85 KRSTFLGKVKIAGSTFAKV 103 (983)
Q Consensus 85 ~~d~~lG~~~i~l~~l~~~ 103 (983)
+|++||++.|++..+...
T Consensus 74 -~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 74 -WDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp -CEEEEEEEEEEGGGSCBC
T ss_pred -CCCeEEEEEEEHHHhhhc
Confidence 899999999999998743
No 74
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.53 E-value=4.9e-14 Score=164.10 Aligned_cols=115 Identities=21% Similarity=0.259 Sum_probs=98.6
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeeceEEEEEEec--CCCEEEEEEEeCC
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTILDRFNPRWNEQYTWDVYD--PCTVLTIGVFDNG 662 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~~t~nP~Wne~~~~~v~~--~~~~l~i~v~D~d 662 (983)
...|.|.|+|++|+||+. |. .|++||||++++++...||+++++++||+|||+|.|.+.+ ....|.|+|||+|
T Consensus 391 ~~~~~L~V~V~~A~~L~~----D~-~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D 465 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG----DY-TTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 465 (540)
T ss_dssp TTEEEEEEEEEEEESCCC----SS-CSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECC
T ss_pred CcccEEEEEEEEccCCCc----cc-CCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECC
Confidence 358999999999999954 56 8899999999999989999999999999999999999754 5678999999999
Q ss_pred CCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEEecCh
Q 002002 663 RYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTCSSW 725 (983)
Q Consensus 663 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~~~~ 725 (983)
..+ +|++||.+.++|. .|. ...|++|. .|+|++.+..+|...
T Consensus 466 ~~~--------~dD~LG~~~~~L~---~g~-~~~~~~l~---------~G~l~~~~~~~c~p~ 507 (540)
T 3nsj_A 466 YGW--------DDDLLGSCDRSPH---SGF-HEVTCELN---------HGRVKFSYHAKCLPH 507 (540)
T ss_dssp SSS--------CCEEEEEEEECCC---SEE-EEEEEECS---------SSEEEEEEEEEECTT
T ss_pred CCC--------CCCEEEEEEEEee---CCc-EEEEEEcC---------CeEEEEEEEEEECCC
Confidence 987 7889999999987 343 46677643 499999999998643
No 75
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.52 E-value=9.2e-14 Score=129.39 Aligned_cols=116 Identities=18% Similarity=0.250 Sum_probs=99.5
Q ss_pred EEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeeceEEEEEEec---CCCEEEEEEEeCCCC
Q 002002 589 LLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIL-DRFNPRWNEQYTWDVYD---PCTVLTIGVFDNGRY 664 (983)
Q Consensus 589 ~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~-~t~nP~Wne~~~~~v~~---~~~~l~i~v~D~d~~ 664 (983)
-|+|.|.+|.|| .|++|||+.+.+.+.+.+|+++. .+.||+|||.|+|++.. ....|.|.|||++++
T Consensus 22 sL~V~l~~a~~L---------pg~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 22 ALIVHLKTVSEL---------RGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEESC---------CSCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEecCC---------CCCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 588999999999 46899999999999999999998 59999999999999964 456999999999999
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEEec
Q 002002 665 KRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTCS 723 (983)
Q Consensus 665 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~~ 723 (983)
+ +|.+||++.++|.++..+.....+.+|.+.+.+ ...|+|.++++|.+.
T Consensus 93 ~--------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~--~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 F--------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNA--IIKTSLSMEVRYQAA 141 (144)
T ss_dssp S--------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSC--EEEEEEEEEEEEEET
T ss_pred c--------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCC--ccccEEEEEEEecCC
Confidence 8 789999999999999877666666777765332 234899999999753
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.52 E-value=8.9e-14 Score=137.58 Aligned_cols=118 Identities=19% Similarity=0.129 Sum_probs=88.2
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcC-CCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKF-RDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKT 83 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~ 83 (983)
....|.|+|++|++|. ..|.+||||+|+ ++..+|++++ +++||.|||+|.|.+... ...|.|+|||.+ .
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~----~~~L~~~V~D~d-~ 81 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL----DLGLTVEVWNKG-L 81 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT----TSEEEEEEEECC-S
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC----CCEEEEEEEECC-C
Confidence 4579999999999884 267899999999 4445676665 699999999999999865 568999999987 6
Q ss_pred CCCCCccEEEEEECccceecC-----CeeeEEEEceecCCc-----ceeeeEEEEEEEEe
Q 002002 84 GKRSTFLGKVKIAGSTFAKVG-----SESSVYYPLEKRSVF-----SQIKGEIGLKVYYI 133 (983)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~-----~~~~~w~~L~~~~~~-----s~~~G~l~l~i~~~ 133 (983)
+ +|++||++.|+|..+...+ .-...|+.+....+. ....|.+++++.+.
T Consensus 82 ~-~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 82 I-WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp S-CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred C-CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 5 8999999999999986433 123345555433221 12345677887764
No 77
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.51 E-value=7e-14 Score=138.36 Aligned_cols=116 Identities=21% Similarity=0.305 Sum_probs=88.8
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeeceEEEEEEecCCCEEEEEEEeCCCC
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIL-DRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRY 664 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~-~t~nP~Wne~~~~~v~~~~~~l~i~v~D~d~~ 664 (983)
.+|.|.|+|++|++|+ . .|++||||+++ .+..||++++ +++||+|||+|.|.+.+....|.|+|||+| .
T Consensus 12 ~~~~L~V~V~~A~~l~------~-~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~ 81 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG------A-QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-L 81 (167)
T ss_dssp CCCEEEEEEEEEECSS------C-GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-S
T ss_pred ceEEEEEEEEEEECCC------C-CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-C
Confidence 4789999999999883 1 67899999999 3345777776 699999999999999988889999999999 7
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCCC------eEEEEEEeeecCCCCC------ccceEEEEEEEEE
Q 002002 665 KRDEAGKPGKDVRVGKIRVRLSTLDTNR------VYLNSYSLTVLLPGGA------KKMGEIEIAVRFT 721 (983)
Q Consensus 665 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~~g~------~~~G~l~l~~~f~ 721 (983)
+ +|++||++.|+|.++.... ....+|.+... .|. ...|.+.++++|.
T Consensus 82 ~--------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~--~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 82 I--------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMA--DSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp S--------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEEEE
T ss_pred C--------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcC--CCCCCceEccccceEEEEEEee
Confidence 6 7889999999999985422 22234443322 221 1235588888885
No 78
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.50 E-value=6.7e-14 Score=165.71 Aligned_cols=119 Identities=26% Similarity=0.420 Sum_probs=102.3
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeeceEEEEEEecCC-CEEEEEEEeCCC
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTILDRFNPRWNEQYTWDVYDPC-TVLTIGVFDNGR 663 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~~~rT~~~~~t~nP~Wne~~~~~v~~~~-~~l~i~v~D~d~ 663 (983)
...|.|.|+|++|+||+++ |. .|++||||++.+++...+|+++++|+||.|||+|.|.+..+. ..|.|+|||+|.
T Consensus 384 ~~~~~l~v~v~~a~~L~~~---d~-~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKAC---KP-NGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ 459 (510)
T ss_dssp --CEEEEEEEEEEESCCCC---ST-TSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS
T ss_pred CCCceEEEEeceeecCCCC---CC-CCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC
Confidence 4689999999999999765 66 889999999999999999999999999999999999998766 589999999999
Q ss_pred CCCcCCCCCCCCceeEEEEEEcccccCCCe----EEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 664 YKRDEAGKPGKDVRVGKIRVRLSTLDTNRV----YLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 664 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
.+ +|++||++.++|.++..+.. ...|++|... ..|+|++.+.+.
T Consensus 460 ~~--------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 FS--------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ 507 (510)
T ss_dssp SS--------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred CC--------CCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence 88 78899999999999976543 5688887633 359998888764
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.47 E-value=2e-13 Score=161.67 Aligned_cols=120 Identities=21% Similarity=0.352 Sum_probs=102.9
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKTG 84 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~~ 84 (983)
+.+.|.|+|++|++|+++|..|.+||||++.+++++++|+++++++||.|||+|.|.+.... ...|.|+|||.+..+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~---~~~l~~~v~d~d~~~ 461 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLY---QDVLCLTLFDRDQFS 461 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTT---TCEEEEEEEECCSSS
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCC---CCEEEEEEEeCCCCC
Confidence 44689999999999999999999999999999999999999999999999999999996553 578999999988886
Q ss_pred CCCCccEEEEEECccceecC---CeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 85 KRSTFLGKVKIAGSTFAKVG---SESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 85 ~~d~~lG~~~i~l~~l~~~~---~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
+|+|||++.+++..+.... .....|++|... ..|+|.+++.+.
T Consensus 462 -~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l~ 507 (510)
T 3jzy_A 462 -PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDLQ 507 (510)
T ss_dssp -SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEEE
T ss_pred -CCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEEE
Confidence 8999999999999987321 226789999765 358888887653
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.46 E-value=4.4e-13 Score=156.10 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=95.8
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeCCCCC
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYNDKKTG 84 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~~~~~ 84 (983)
+.+.|.|+|++|++|+. |..|++||||+|.+++++++|+++++++||+|||+|.|.+.... ....|.|+|||.|...
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~--~~~~L~~~V~D~D~~~ 468 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLS--TGGPLRVQVWDADYGW 468 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETT--TCCCEEEEEEECCSSS
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCC--CCCEEEEEEEECCCCC
Confidence 35689999999999998 99999999999999999999999999999999999999875421 2678999999988876
Q ss_pred CCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 85 KRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 85 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
+|||||++.++|.. .....|++|. .|+|++++...
T Consensus 469 -~dD~LG~~~~~L~~-----g~~~~~~~l~--------~G~l~~~~~~~ 503 (540)
T 3nsj_A 469 -DDDLLGSCDRSPHS-----GFHEVTCELN--------HGRVKFSYHAK 503 (540)
T ss_dssp -CCEEEEEEEECCCS-----EEEEEEEECS--------SSEEEEEEEEE
T ss_pred -CCCEEEEEEEEeeC-----CcEEEEEEcC--------CeEEEEEEEEE
Confidence 88999999999873 2356788875 28888887755
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=8.9e-13 Score=157.19 Aligned_cols=121 Identities=17% Similarity=0.283 Sum_probs=103.9
Q ss_pred CCcEEEEEEEEeeCCCCCCC--CCCCCeEEEEEECC-----eEEeeeCcCCC-CCCeeeeEEEEEeeecCCCCCceEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKDG--QGTASAYVIVDFDG-----QRRRTKTKFRD-LNPQWDERLEFLVHDAESMPTEILEIN 76 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~--~g~~dPyv~v~~~~-----~~~~T~~~~~t-~nP~WnE~f~f~v~~~~~l~~~~L~v~ 76 (983)
....|.|+|++|++|+..+. .|.+||||+|.+.+ .+++|++++++ +||+|||+|.|.+..++ ...|.|.
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e---l~~L~~~ 571 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPD---LALVRFM 571 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGG---GCEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCC---CCEEEEE
Confidence 45789999999999999884 68999999999944 68999999997 99999999999997763 3689999
Q ss_pred EEeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 77 LYNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 77 V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
|||++.++ +++|||++.+++..+.. ..+|++|.+..+.....|.|.+++.+.
T Consensus 572 V~D~D~~~-~dd~iG~~~ipl~~L~~----G~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 572 VEDYDSSS-KNDFIGQSTIPWNSLKQ----GYRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EEECCSSS-CCEEEEEEEEEGGGBCC----EEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEcCCCC-CCceeEEEEEEHHHcCC----CcEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99988886 89999999999999862 457999988766654678999998875
No 82
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.40 E-value=2.6e-14 Score=166.28 Aligned_cols=120 Identities=18% Similarity=0.245 Sum_probs=21.0
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCE-EEEeeeecCC---CCCeeceEEEEEEecCCCEEEEEEEeC
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPK-WVRTRTILDR---FNPRWNEQYTWDVYDPCTVLTIGVFDN 661 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~-~~rT~~~~~t---~nP~Wne~~~~~v~~~~~~l~i~v~D~ 661 (983)
..|.|+|+|++|+||+++ .||||++.+++. +.||+++++| +||.|||+|+|.+......|.|+|||.
T Consensus 9 ~~~~L~V~VieAk~L~~~---------ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~ 79 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPK---------KRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRD 79 (483)
T ss_dssp EEECC------------------------------------------------------CCEECC---------------
T ss_pred eccEEEEEEEEcCCcCCC---------CCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEec
Confidence 357899999999999664 289999999875 7799999999 999999999999766567999999994
Q ss_pred -CC---CCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCC---------------------CCCccceEEEE
Q 002002 662 -GR---YKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLP---------------------GGAKKMGEIEI 716 (983)
Q Consensus 662 -d~---~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~l~l 716 (983)
|. .+ +|++||++.|++.++..+....+||+|...+. +|.+..|+|++
T Consensus 80 ~d~~~~~~--------~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL 151 (483)
T 3bxj_A 80 SDKKRKKD--------KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRL 151 (483)
T ss_dssp -----------------------------------CCEECC--------------------------------------C
T ss_pred CCccccCC--------CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEE
Confidence 42 44 67899999999999998888899999976543 12234699999
Q ss_pred EEEEEe
Q 002002 717 AVRFTC 722 (983)
Q Consensus 717 ~~~f~~ 722 (983)
.++|+.
T Consensus 152 ~v~~~~ 157 (483)
T 3bxj_A 152 KARYQT 157 (483)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 999975
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.39 E-value=1.7e-12 Score=154.70 Aligned_cols=121 Identities=19% Similarity=0.271 Sum_probs=100.8
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-----EEEEeeeecCC-CCCeeceEEEEEEecCC-CEEEEEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-----KWVRTRTILDR-FNPRWNEQYTWDVYDPC-TVLTIGV 658 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-----~~~rT~~~~~t-~nP~Wne~~~~~v~~~~-~~l~i~v 658 (983)
..+.|.|+|++|++|+.++. +. .|++||||++.+.+ ...||++++++ +||+|||+|.|.+..+. ..|.|+|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~-~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V 572 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NK-NSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV 572 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CS-SSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cc-cCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEE
Confidence 56899999999999987642 12 57899999999843 68899999998 99999999999998764 5899999
Q ss_pred EeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCc-cceEEEEEEEEE
Q 002002 659 FDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAK-KMGEIEIAVRFT 721 (983)
Q Consensus 659 ~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~l~l~~~f~ 721 (983)
||+|..+ +|++||++.|+|..|..|. +|+||.... |.. ..|+|.+.+.|+
T Consensus 573 ~D~D~~~--------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~--g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 573 EDYDSSS--------KNDFIGQSTIPWNSLKQGY---RHVHLLSKN--GDQHPSATLFVKISIQ 623 (624)
T ss_dssp EECCSSS--------CCEEEEEEEEEGGGBCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EEcCCCC--------CCceeEEEEEEHHHcCCCc---EEEeCCCCC--cCCCCceEEEEEEEEE
Confidence 9999987 7889999999999998874 589998653 322 358888888774
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.33 E-value=2e-12 Score=155.00 Aligned_cols=107 Identities=26% Similarity=0.420 Sum_probs=94.8
Q ss_pred CCCcEEEEEEEEeeCCCC---CCCCCCCCeEEEEEECC---eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEE
Q 002002 4 SCNRKLIVEVCNAKNLMP---KDGQGTASAYVIVDFDG---QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINL 77 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~---~d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V 77 (983)
...+.|.|+|++|++|++ +|..|.+||||+|.+++ ++++|+++++++||+|||+|.|.+..+. ...|.|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~---~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQ---ENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTS---CCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCC---CCEEEEEE
Confidence 356799999999999998 88889999999999984 7899999999999999999999997642 67899999
Q ss_pred EeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceec
Q 002002 78 YNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKR 116 (983)
Q Consensus 78 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~ 116 (983)
||.+..+ |++||++.+++..+. .+.....|++|.+.
T Consensus 92 ~D~D~~~--ddfIG~v~I~L~~L~-~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 92 MDANYVM--DETLGTATFTVSSMK-VGEKKEVPFIFNQV 127 (749)
T ss_dssp EECCSSS--CEEEEEECCBSTTSC-TTCCCCEEEEETTT
T ss_pred EECCCCC--CceeEEEEEEHHHcC-CCCceEEEEecCCC
Confidence 9988774 899999999999986 56677899999865
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.32 E-value=1.4e-12 Score=156.26 Aligned_cols=107 Identities=21% Similarity=0.234 Sum_probs=93.1
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC---EEEEeeeecCCCCCeeceEEEEEEecC-CCEEEEEEEe
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP---KWVRTRTILDRFNPRWNEQYTWDVYDP-CTVLTIGVFD 660 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~---~~~rT~~~~~t~nP~Wne~~~~~v~~~-~~~l~i~v~D 660 (983)
.+.|.|.|+|++|++|++.+.+|. .|++||||++++++ ...||+++++++||+|||+|.|.+..+ ...|+|+|||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~-~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDM-LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHH-HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCC-CCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 568999999999999976110245 78999999999984 688999999999999999999999874 5689999999
Q ss_pred CCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEee
Q 002002 661 NGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLT 701 (983)
Q Consensus 661 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 701 (983)
+|.++ |++||++.|+|.+|..+....+|++|.
T Consensus 94 ~D~~~---------ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 94 ANYVM---------DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CCSSS---------CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCCC---------CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 99864 679999999999999888788999986
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.27 E-value=3.5e-13 Score=156.82 Aligned_cols=120 Identities=25% Similarity=0.328 Sum_probs=20.7
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCe-EEeeeCcCCC---CCCeeeeEEEEEeeecCCCCCceEEEEEEeC-
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQ-RRRTKTKFRD---LNPQWDERLEFLVHDAESMPTEILEINLYND- 80 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~-~~~T~~~~~t---~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~- 80 (983)
.+.|.|+|++|++|+++| ||||++.++++ ..||+++++| +||.|||+|.|.+... ...|.|.|||+
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~----~~~L~v~V~d~~ 80 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA----VRALRLHLYRDS 80 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC----ccEEEEEEEecC
Confidence 467999999999999886 99999999885 6799999999 9999999999997543 47899999984
Q ss_pred C---CCCCCCCccEEEEEECccceecCCeeeEEEEceecCC----------------------cceeeeEEEEEEEEecC
Q 002002 81 K---KTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSV----------------------FSQIKGEIGLKVYYIDE 135 (983)
Q Consensus 81 ~---~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~----------------------~s~~~G~l~l~i~~~~~ 135 (983)
+ +.+ +|+|||++.|++..+. .+.....||+|..... .....|+|+|++.|...
T Consensus 81 d~~~~~~-~d~~lG~v~i~l~~l~-~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 81 DKKRKKD-KAGYVGLVTVPVATLA-GRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred CccccCC-CCceEEEEEEEHHHhc-CCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 3 244 8999999999999987 4567789999954322 11346999999999754
Q ss_pred C
Q 002002 136 D 136 (983)
Q Consensus 136 ~ 136 (983)
.
T Consensus 159 ~ 159 (483)
T 3bxj_A 159 S 159 (483)
T ss_dssp C
T ss_pred e
Confidence 3
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.08 E-value=5e-10 Score=136.36 Aligned_cols=115 Identities=24% Similarity=0.310 Sum_probs=95.2
Q ss_pred cEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC------eEEeeeCcCC-CCCCeeee-EEEEE-eeecCCCCCceEEEEE
Q 002002 7 RKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG------QRRRTKTKFR-DLNPQWDE-RLEFL-VHDAESMPTEILEINL 77 (983)
Q Consensus 7 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~-t~nP~WnE-~f~f~-v~~~~~l~~~~L~v~V 77 (983)
..|.|+|++|++|+.+ .+||||+|.+.+ .+++|+++++ ++||+||| +|.|. +..++ ...|.|.|
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe---la~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT---LASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG---GCEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCC---cCEEEEEE
Confidence 5799999999999853 689999999964 3579999976 59999999 69998 65553 45799999
Q ss_pred EeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEecCCC
Q 002002 78 YNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYIDEDP 137 (983)
Q Consensus 78 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~~~~ 137 (983)
||++ ++|||++.+|+..|. ...++++|.+..+.....|.|.+.+.+.+..+
T Consensus 798 ~D~d-----ddfiG~~~lpL~~L~----~GyR~vpL~~~~g~~l~~atLfv~i~~~~~~~ 848 (885)
T 3ohm_B 798 FEEG-----GKFVGHRILPVSAIR----SGYHYVCLRNEANQPLCLPALLIYTEASDYIP 848 (885)
T ss_dssp EETT-----TEEEEEEEEETTTCC----CEEEEEEEECTTSCEEEEEEEEEEEEEEECCC
T ss_pred EcCC-----ccEEeeEEEEHHHcC----CCceEEEecCCCCCccCceEEEEEEEEEecCC
Confidence 9764 789999999999986 35678999988777667899999999986443
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.07 E-value=9.9e-10 Score=133.16 Aligned_cols=115 Identities=19% Similarity=0.237 Sum_probs=95.7
Q ss_pred cEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC-------eEEeeeCcCC-CCCCeeeeE-EEEE-eeecCCCCCceEEEE
Q 002002 7 RKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG-------QRRRTKTKFR-DLNPQWDER-LEFL-VHDAESMPTEILEIN 76 (983)
Q Consensus 7 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-------~~~~T~~~~~-t~nP~WnE~-f~f~-v~~~~~l~~~~L~v~ 76 (983)
..|.|+|++|++|+.+ .+||||+|.+.+ ++++|+++++ ++||+|||+ |.|. +..++ -..|.|.
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe---la~Lrf~ 722 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD---LAVVRII 722 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG---GCEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC---ccEEEEE
Confidence 6799999999999853 689999999964 5789999886 699999998 9998 76553 3589999
Q ss_pred EEeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEecCCC
Q 002002 77 LYNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYIDEDP 137 (983)
Q Consensus 77 V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~~~~ 137 (983)
|||++ ++|||++.+|+..+. ...++++|.+..+..-..+.|.+.+.+.+..+
T Consensus 723 V~D~d-----ddfiG~~~ipL~~L~----~GyR~vpL~~~~g~~~~~atLfv~i~~~~~~~ 774 (816)
T 3qr0_A 723 VSEEN-----GKFIGHRVMPLDGIK----PGYRHVPLRNESNRPLGLASVFAHIVAKDYVS 774 (816)
T ss_dssp EEETT-----SCEEEEEEEESTTCC----CEEEEEEEECTTSCEEEEEEEEEEEEEEECCC
T ss_pred EEecC-----CCeeeEEEEEHHHcC----CcceEEEEeCCCCCCCCceEEEEEEEEEecCc
Confidence 99753 689999999999986 35678999988776656699999999886544
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.05 E-value=3.1e-10 Score=138.33 Aligned_cols=107 Identities=28% Similarity=0.521 Sum_probs=92.7
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE-----CCeEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDF-----DGQRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYND 80 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~ 80 (983)
...|.|+|++|++|.++|..|.+||||++.+ ...+++|+++++++||.|||+|.|.+...+ ....|.|+|||.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~--~~~~L~v~v~d~ 248 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESD--KDRRLSVEIWDW 248 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTT--TTCEEEEEEEEC
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCC--ccceeeeEEeec
Confidence 4679999999999999999999999999999 346889999999999999999999987543 245799999998
Q ss_pred CCCCCCCCccEEEEEECccceecCCeeeEEEEceecC
Q 002002 81 KKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRS 117 (983)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~ 117 (983)
+..+ +|++||++.+++.++... ....|+.|....
T Consensus 249 d~~~-~dd~iG~~~i~l~~l~~~--~~~~w~~Lls~~ 282 (674)
T 3pfq_A 249 DLTS-RNDFMGSLSFGISELQKA--GVDGWFKLLSQE 282 (674)
T ss_dssp CSSS-CCEECCBCCCBTTHHHHC--CEEEEEECBCTT
T ss_pred cccc-ccccccccccchhhhccC--Ccccceeecccc
Confidence 8886 899999999999998743 358899987653
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.03 E-value=2.8e-10 Score=138.71 Aligned_cols=104 Identities=27% Similarity=0.436 Sum_probs=90.2
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEE-----CCEEEEeeeecCCCCCeeceEEEEEEec--CCCEEEEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY-----GPKWVRTRTILDRFNPRWNEQYTWDVYD--PCTVLTIGVF 659 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~-----~~~~~rT~~~~~t~nP~Wne~~~~~v~~--~~~~l~i~v~ 659 (983)
.+.|.|.|++|++|+++ |. .|++||||++++ +....+|+++++++||.|||+|.|.+.. ....|.|+||
T Consensus 171 ~~~L~V~v~~a~~L~~~---d~-~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~ 246 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPM---DP-NGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIW 246 (674)
T ss_dssp SSEEEEEEEEEESCCCC---ST-TSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEE
T ss_pred cceeeeeeecccccCCC---Cc-ccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEe
Confidence 35799999999999776 56 899999999998 3467899999999999999999999864 3457999999
Q ss_pred eCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeec
Q 002002 660 DNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVL 703 (983)
Q Consensus 660 D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 703 (983)
|+|..+ +|++||.+.++++++..+.. .+||+|...
T Consensus 247 d~d~~~--------~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~ 281 (674)
T 3pfq_A 247 DWDLTS--------RNDFMGSLSFGISELQKAGV-DGWFKLLSQ 281 (674)
T ss_dssp ECCSSS--------CCEECCBCCCBTTHHHHCCE-EEEEECBCT
T ss_pred eccccc--------ccccccccccchhhhccCCc-ccceeeccc
Confidence 999988 78899999999999986653 889988764
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.99 E-value=2.1e-09 Score=131.26 Aligned_cols=112 Identities=21% Similarity=0.278 Sum_probs=90.7
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECC------eEEeee-CcC-CCCCCeeee-EEEE-EeeecCCCCCceEEE
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDG------QRRRTK-TKF-RDLNPQWDE-RLEF-LVHDAESMPTEILEI 75 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~-~~~-~t~nP~WnE-~f~f-~v~~~~~l~~~~L~v 75 (983)
.+.|.|+|++|++|+. +.+||||+|.+.+ ++++|+ +++ +++||+||| +|.| .+..++ -..|.|
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e---l~~Lr~ 749 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE---LASLRV 749 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG---GCEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC---ccEEEE
Confidence 3589999999999985 4689999999943 367999 776 469999999 7999 786653 348999
Q ss_pred EEEeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 76 NLYNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 76 ~V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
.|||++ ++|||++.+|+..+. ...+|++|.+..+..-..+.|.+++.+.
T Consensus 750 ~V~D~d-----~d~iG~~~ipl~~L~----~G~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 750 AVMEEG-----NKFLGHRIIPINALN----SGYHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEEETT-----TEEEEEEEEEGGGBC----CEEEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEEeC-----CCccceEeeehhhcC----CCcEEEeccCCCCCCCCceEEEEEEEEE
Confidence 999864 689999999999986 3567999988766544568999988764
No 92
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.99 E-value=4.9e-09 Score=94.55 Aligned_cols=111 Identities=14% Similarity=0.251 Sum_probs=87.3
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEECCe----EEee-eCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDFDGQ----RRRT-KTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYND 80 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~----~~~T-~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~ 80 (983)
...|+|.+.++.--.-+......||||.|.++.. +.+| .++++|..|.|||+|.-++.+ ...|.|.||++
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-----Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-----GRVIQIVLMRA 79 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-----TCEEEEEEEEE
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-----CEEEEEEEEcC
Confidence 3678888877653222222346899999999762 3355 888899999999999999976 58999999964
Q ss_pred CCCCCCCCccEEEEEECcccee----cCCeeeEEEEceecCCcceeeeEEEEEEEEe
Q 002002 81 KKTGKRSTFLGKVKIAGSTFAK----VGSESSVYYPLEKRSVFSQIKGEIGLKVYYI 133 (983)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~----~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~ 133 (983)
.. +|+..++|++.++.. .+...+.|+.|++. |.|++.+.|+
T Consensus 80 a~-----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~-------Gkl~~~i~~~ 124 (126)
T 1yrk_A 80 AE-----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ-------AKVLMSVQYF 124 (126)
T ss_dssp TT-----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS-------CEEEEEEEEE
T ss_pred CC-----CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEe
Confidence 32 899999999999983 25678899999875 9999999886
No 93
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.98 E-value=3.6e-09 Score=96.66 Aligned_cols=116 Identities=12% Similarity=0.217 Sum_probs=90.8
Q ss_pred CCCcEEEEEEEEeeCCCCCC-CCCCCCeEEEEEECC-e---EEee-eCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEE
Q 002002 4 SCNRKLIVEVCNAKNLMPKD-GQGTASAYVIVDFDG-Q---RRRT-KTKFRDLNPQWDERLEFLVHDAESMPTEILEINL 77 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~~-~---~~~T-~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V 77 (983)
+....|+|.+.++.-..... .....||||.|.++. . +.+| .++++|..|.|||+|.-++.+ ...|.|.|
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-----Gr~l~i~V 81 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-----GRVMQIIV 81 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-----SCEEEEEE
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-----CeEEEEEE
Confidence 34467889887776433322 123689999999976 2 3677 788889999999999999876 58999999
Q ss_pred EeCCCCCCCCCccEEEEEECcccee----cCCeeeEEEEceecCCcceeeeEEEEEEEEecCC
Q 002002 78 YNDKKTGKRSTFLGKVKIAGSTFAK----VGSESSVYYPLEKRSVFSQIKGEIGLKVYYIDED 136 (983)
Q Consensus 78 ~~~~~~~~~d~~lG~~~i~l~~l~~----~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~~~ 136 (983)
|++. .+|+..++|++.+|.. .+...+.|+.|++. |.|++.+.|..+.
T Consensus 82 fh~a-----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~-------Gkl~v~i~~~~e~ 132 (138)
T 2enj_A 82 KGKN-----VDLISETTVELYSLAERCRKNNGKTEIWLELKPQ-------GRMLMNARYFLEM 132 (138)
T ss_dssp ECSS-----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS-------CEEEEEEEECCCS
T ss_pred EcCC-----CCeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEEEec
Confidence 9543 2899999999999983 25678999999875 9999999997443
No 94
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.97 E-value=2.2e-09 Score=130.11 Aligned_cols=126 Identities=17% Similarity=0.228 Sum_probs=87.9
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC-------EEEEeeeecC-CCCCeeceE-EEEE-EecCC-CEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP-------KWVRTRTILD-RFNPRWNEQ-YTWD-VYDPC-TVLT 655 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~-------~~~rT~~~~~-t~nP~Wne~-~~~~-v~~~~-~~l~ 655 (983)
.+.|.|+|++|++|+. .++||||.+++.+ +..||+++++ ++||+|||+ |+|. |..+. ..|+
T Consensus 649 ~~~L~V~Visaq~L~~--------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lr 720 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD--------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVR 720 (816)
T ss_dssp CEEEEEEEEEEECCCS--------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEE
T ss_pred ceEEEEEEEEcccCCC--------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEE
Confidence 5799999999999953 2589999999854 5789999987 499999998 9998 76554 4899
Q ss_pred EEEEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEEe---cChHHHHHHh
Q 002002 656 IGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTC---SSWLNLIQAY 732 (983)
Q Consensus 656 i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~---~~~~~~~~~~ 732 (983)
|+|||++ |++||.+.|+|+.|..|. +.+||.+..... -..++|.+.+.+.. ..+.++..+-
T Consensus 721 f~V~D~d------------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~-~~~atLfv~i~~~~~~~~~~~~~~~~~ 784 (816)
T 3qr0_A 721 IIVSEEN------------GKFIGHRVMPLDGIKPGY---RHVPLRNESNRP-LGLASVFAHIVAKDYVSDAFADFADAL 784 (816)
T ss_dssp EEEEETT------------SCEEEEEEEESTTCCCEE---EEEEEECTTSCE-EEEEEEEEEEEEEECCC----------
T ss_pred EEEEecC------------CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCC-CCceEEEEEEEEEecCchhHHHHHHHH
Confidence 9999974 359999999999999874 458888653221 22477777776653 3445666666
Q ss_pred cCCC
Q 002002 733 ATPM 736 (983)
Q Consensus 733 ~~p~ 736 (983)
.+|.
T Consensus 785 ~~p~ 788 (816)
T 3qr0_A 785 LNPI 788 (816)
T ss_dssp ----
T ss_pred hChH
Confidence 6665
No 95
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.96 E-value=1.4e-09 Score=132.39 Aligned_cols=126 Identities=21% Similarity=0.267 Sum_probs=96.4
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEEEECC------EEEEeeeecCC-CCCeece-EEEEE-EecCC-CEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGP------KWVRTRTILDR-FNPRWNE-QYTWD-VYDPC-TVLTI 656 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~------~~~rT~~~~~t-~nP~Wne-~~~~~-v~~~~-~~l~i 656 (983)
...|.|+|++|++|+. .++||||+|.+.+ ...||+++.++ +||+||| .|.|. |..+. ..|+|
T Consensus 724 ~~~L~V~Visaq~L~~--------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf 795 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD--------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRI 795 (885)
T ss_dssp CEEEEEEEEEEESCCS--------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEeccCcc--------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEE
Confidence 3589999999999953 2589999999853 35799999875 9999999 69998 65443 48999
Q ss_pred EEEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEEe---cChHHHHHHhc
Q 002002 657 GVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTC---SSWLNLIQAYA 733 (983)
Q Consensus 657 ~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~---~~~~~~~~~~~ 733 (983)
+|||+| |++||++.|+|+.|..|. +.+||.+..... -..|+|.+.+.+.. ..+.+++.+-.
T Consensus 796 ~V~D~d------------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~-l~~atLfv~i~~~~~~~~~~~~~~~~l~ 859 (885)
T 3ohm_B 796 AAFEEG------------GKFVGHRILPVSAIRSGY---HYVCLRNEANQP-LCLPALLIYTEASDYIPDDHQDYAEALI 859 (885)
T ss_dssp EEEETT------------TEEEEEEEEETTTCCCEE---EEEEEECTTSCE-EEEEEEEEEEEEEECCCGGGHHHHHHHH
T ss_pred EEEcCC------------ccEEeeEEEEHHHcCCCc---eEEEecCCCCCc-cCceEEEEEEEEEecCCccHHHHHHHHh
Confidence 999975 359999999999998874 457888653221 23588888887763 45667776666
Q ss_pred CCC
Q 002002 734 TPM 736 (983)
Q Consensus 734 ~p~ 736 (983)
+|.
T Consensus 860 ~p~ 862 (885)
T 3ohm_B 860 NPI 862 (885)
T ss_dssp CHH
T ss_pred ChH
Confidence 554
No 96
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.86 E-value=6.9e-09 Score=126.73 Aligned_cols=112 Identities=18% Similarity=0.301 Sum_probs=87.0
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEE-CC-----EEEEee-eecC-CCCCeece-EEEE-EEecCC-CEE
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY-GP-----KWVRTR-TILD-RFNPRWNE-QYTW-DVYDPC-TVL 654 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~-~~-----~~~rT~-~~~~-t~nP~Wne-~~~~-~v~~~~-~~l 654 (983)
..|.|.|+|++|++|+. +++||||.+.+ |. ++.||+ ++++ ++||+||| .|.| .|..+. ..|
T Consensus 676 ~~~~L~V~Visa~~L~~--------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~L 747 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE--------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASL 747 (799)
T ss_dssp TCEEEEEEEEEEESCCS--------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEE
T ss_pred eeeeEEEEEEeccccCc--------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEE
Confidence 46899999999999952 36899999998 41 357999 8876 58999999 6999 786554 489
Q ss_pred EEEEEeCCCCCCcCCCCCCCCceeEEEEEEcccccCCCeEEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 655 TIGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 655 ~i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
.|.|||++ |++||.+.|+|+.|..|. +++||....... -..++|.+.+.+.
T Consensus 748 r~~V~D~d------------~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~-~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 748 RVAVMEEG------------NKFLGHRIIPINALNSGY---HHLCLHSESNMP-LTMPALFIFLEMK 798 (799)
T ss_dssp EEEEEETT------------TEEEEEEEEEGGGBCCEE---EEEEEECTTCCE-EEEEEEEEEEEEE
T ss_pred EEEEEEeC------------CCccceEeeehhhcCCCc---EEEeccCCCCCC-CCceEEEEEEEEE
Confidence 99999975 359999999999998874 578888653221 2247777777664
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.53 E-value=8.6e-07 Score=80.02 Aligned_cols=108 Identities=15% Similarity=0.237 Sum_probs=81.7
Q ss_pred cEEEEEEEceecc--ccccccCCCCCCCCCcEEEEEECCEE----EEe-eeecCCCCCeeceEEEEEEecCCCEEEEEEE
Q 002002 587 IGLLEVGIRGATN--LLPVKTKDGTRGTTDAYVVAKYGPKW----VRT-RTILDRFNPRWNEQYTWDVYDPCTVLTIGVF 659 (983)
Q Consensus 587 ~g~L~v~v~~a~~--L~~~~~~d~~~g~sDpy~~~~~~~~~----~rT-~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~ 659 (983)
.+.|+|.+.++.- |++. ....||||.+.+.... .+| .+.++|..|.||+.|.-.|.+ ...|.|.||
T Consensus 5 ~~flRi~~~~~~~~~~~~~------~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vf 77 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAE------DEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLM 77 (126)
T ss_dssp CCEEEEEEEEEECSSCCCS------SSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEE
T ss_pred CccEEeeeccccccccCCc------cccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEE
Confidence 4577777655542 2211 2358999999986532 265 788899999999999999865 669999999
Q ss_pred eCCCCCCcCCCCCCCCceeEEEEEEccccc-----CCCeEEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 660 DNGRYKRDEAGKPGKDVRVGKIRVRLSTLD-----TNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 660 D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
+.. . +|++.+.|++.+|. .+...+.|..|. +.|.|++.++|.
T Consensus 78 h~a-----------~-~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 78 RAA-----------E-EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQYF 124 (126)
T ss_dssp EET-----------T-EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEEE
T ss_pred cCC-----------C-CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEe
Confidence 632 2 59999999999997 456778888776 359999999884
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.44 E-value=1e-06 Score=80.57 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=83.2
Q ss_pred CcEEEEEEEceeccccccccCCCCCCCCCcEEEEEECCE-E---EEe-eeecCCCCCeeceEEEEEEecCCCEEEEEEEe
Q 002002 586 PIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPK-W---VRT-RTILDRFNPRWNEQYTWDVYDPCTVLTIGVFD 660 (983)
Q Consensus 586 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~~~~-~---~rT-~~~~~t~nP~Wne~~~~~v~~~~~~l~i~v~D 660 (983)
..+.|+|.+.++.-.+-+. . . ....||||.+.+... . .+| .+.++|..|.||+.|.-.|.+ ...|.|.||+
T Consensus 8 m~~flRi~l~~~~~~~~~~-~-~-~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh 83 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQS-C-Q-GEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKG 83 (138)
T ss_dssp CCCCEEEEEEEEECCCCCC-S-C-CCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEEC
T ss_pred cCcceEEEeeccccCCCCC-c-c-cccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEc
Confidence 3457888876665321110 0 0 335899999998653 2 577 778889999999999999865 6699999995
Q ss_pred CCCCCCcCCCCCCCCceeEEEEEEccccc-----CCCeEEEEEEeeecCCCCCccceEEEEEEEEE
Q 002002 661 NGRYKRDEAGKPGKDVRVGKIRVRLSTLD-----TNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFT 721 (983)
Q Consensus 661 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~ 721 (983)
.. . +||..+.|++.+|. .+...+.|..|. +.|.|++.++|.
T Consensus 84 ~a-----------~-~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 84 KN-----------V-DLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARYF 129 (138)
T ss_dssp SS-----------C-SCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred CC-----------C-CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEE
Confidence 32 2 59999999999997 455678898776 359999999984
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=85.00 E-value=1.3 Score=41.82 Aligned_cols=127 Identities=8% Similarity=0.063 Sum_probs=82.6
Q ss_pred CCCcEEEEEEEEeeCCCCC-CC-CCCCCe--EEEEEECC-eEEeeeCcCCCCCCeeeeEEEEEeeecCC----CCCceEE
Q 002002 4 SCNRKLIVEVCNAKNLMPK-DG-QGTASA--YVIVDFDG-QRRRTKTKFRDLNPQWDERLEFLVHDAES----MPTEILE 74 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~-d~-~g~~dP--yv~v~~~~-~~~~T~~~~~t~nP~WnE~f~f~v~~~~~----l~~~~L~ 74 (983)
.+.+.+.|+|.++. |.+. -. .|..+| ||.+.|.. +.+.|.+.. ..+|.+|-+-.|.+.-.+. ++...|.
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 56678889999886 2211 00 123456 56666655 666676665 8999999998888843211 2356788
Q ss_pred EEEEeCCCCCCCCCccEEEEEECccceecCCeeeEEEEceecCCcceeeeEEEEEEEEec
Q 002002 75 INLYNDKKTGKRSTFLGKVKIAGSTFAKVGSESSVYYPLEKRSVFSQIKGEIGLKVYYID 134 (983)
Q Consensus 75 v~V~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~s~~~G~l~l~i~~~~ 134 (983)
++++.-. +..-..||.+.|++..+...........+|....+....-|.|.+.+.+..
T Consensus 93 lELhqa~--g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 93 LEVHQAY--STEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEC--SSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEEee--CCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 9987542 224568999999999998544444455677665442234688888887753
No 100
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.36 E-value=12 Score=37.44 Aligned_cols=75 Identities=13% Similarity=0.248 Sum_probs=50.3
Q ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE---C------------C----eEEeeeCcCCCCCCeeeeEEEEEeee
Q 002002 4 SCNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF---D------------G----QRRRTKTKFRDLNPQWDERLEFLVHD 64 (983)
Q Consensus 4 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~------------~----~~~~T~~~~~t~nP~WnE~f~f~v~~ 64 (983)
....-|.|++.++. +.........|--|++++ + | ..++|.+...+.+|.|+|++.+.+..
T Consensus 24 d~RNdLYVtl~~g~-F~~~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~ 102 (220)
T 3l4c_A 24 DVRNDIYVTLVQGD-FDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPI 102 (220)
T ss_dssp --CEEEEEEEEEEE-CCCSSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEECT
T ss_pred CCcccEEEEeeEeE-ECCCCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEeeCh
Confidence 45677888888885 332111223455555554 0 1 35788888889999999999999865
Q ss_pred cCCCCCceEEEEEEeC
Q 002002 65 AESMPTEILEINLYND 80 (983)
Q Consensus 65 ~~~l~~~~L~v~V~~~ 80 (983)
+......|.|.+++.
T Consensus 103 -~~~~~~HLlFtFrH~ 117 (220)
T 3l4c_A 103 -EDVNRSHLRFTFRHR 117 (220)
T ss_dssp -TSSTTEEEEEEEEEC
T ss_pred -hhcCCeEEEEEEEEe
Confidence 345578899998864
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=78.83 E-value=12 Score=46.03 Aligned_cols=73 Identities=15% Similarity=0.211 Sum_probs=51.7
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE--CC----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF--DG----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLY 78 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~ 78 (983)
....+.|+|.++.++... ...+-||.+.+ |+ ....|+.+.-..+|.|||.+.|.+.-.+--....|.|.||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 356899999999998754 35677888776 44 2344555555778999999999986543223678999999
Q ss_pred eC
Q 002002 79 ND 80 (983)
Q Consensus 79 ~~ 80 (983)
+.
T Consensus 292 ~~ 293 (940)
T 2wxf_A 292 AV 293 (940)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=73.64 E-value=13 Score=35.10 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=77.2
Q ss_pred CCcEEEEEEEceeccccccccCCCCCCCCCcEEEEEE--CCEEEEeeeecCCCCCeeceEEEEEEecC--------CCEE
Q 002002 585 SPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY--GPKWVRTRTILDRFNPRWNEQYTWDVYDP--------CTVL 654 (983)
Q Consensus 585 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~--~~~~~rT~~~~~t~nP~Wne~~~~~v~~~--------~~~l 654 (983)
+.-+.++++|.++.=-+..- .. .+..+|++-+.+ -.-..++..+....+|.+|-+-.+.|.-. ...+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l--~~-~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVL--QA-SGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHH--HH-HCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred CCCcEEEEEEeEEEEcHHHH--hh-ccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 45567888887776211110 00 223466655554 34333444444588999999888887321 2378
Q ss_pred EEEEEeCCCCCCcCCCCCCCCceeEEEEEEccccc-CCCeEEEEEEeeecCCCCCccceEEEEEEEEEe
Q 002002 655 TIGVFDNGRYKRDEAGKPGKDVRVGKIRVRLSTLD-TNRVYLNSYSLTVLLPGGAKKMGEIEIAVRFTC 722 (983)
Q Consensus 655 ~i~v~D~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~f~~ 722 (983)
.|++.... + ..-..||.++|+|.++. .........+|.... .+....|.|++.+|+.+
T Consensus 92 ~lELhqa~--g-------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~-g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 92 TLEVHQAY--S-------TEYETIAACQLKFHEILEKSGRIFCTASLIGTK-GDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEEC--S-------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSS-SCCTTSEEEEEEEEEEE
T ss_pred EEEEEEee--C-------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCC-CCcceEEEEEEEEEEec
Confidence 88888753 2 14568999999999986 333344555776542 22235799999999874
No 103
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=72.86 E-value=27 Score=43.40 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=61.9
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE--CC----eEEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF--DG----QRRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLY 78 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~----~~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~ 78 (983)
....+.|+|.++.++.... ....+-||.+.+ |+ ...+|+.+. ..+|.|||.+.|.+.-.+--....|.|.||
T Consensus 353 ~~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 3568899999999886432 334678888887 44 334444443 467889999999986533223678999999
Q ss_pred eCCCCCC---CCCccEEEEEECccce
Q 002002 79 NDKKTGK---RSTFLGKVKIAGSTFA 101 (983)
Q Consensus 79 ~~~~~~~---~d~~lG~~~i~l~~l~ 101 (983)
+-....+ ....||.+.+++-+..
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCTT
T ss_pred EecCccCcccccceeEEeeeeeEccC
Confidence 6443211 2346888888876643
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=67.39 E-value=17 Score=44.70 Aligned_cols=93 Identities=13% Similarity=0.165 Sum_probs=59.0
Q ss_pred EEEEEEEceeccccccccCCCCCCCCCcEEEEEE--CCE----EEEeeeecCCCCCeeceEEEEEEe--c--CCCEEEEE
Q 002002 588 GLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKY--GPK----WVRTRTILDRFNPRWNEQYTWDVY--D--PCTVLTIG 657 (983)
Q Consensus 588 g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~~--~~~----~~rT~~~~~t~nP~Wne~~~~~v~--~--~~~~l~i~ 657 (983)
..+.|+|.++.++.. ...++-||.+.+ |++ ...|..+.-..+|.|||.++|++. + ....|.|+
T Consensus 217 ~~f~i~i~~~~~~~~-------~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~t 289 (940)
T 2wxf_A 217 QPFSIELIEGRKVNA-------DERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFA 289 (940)
T ss_dssp SEEEEEEEEEECCCC----------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CceEEEEEEecccCC-------CCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEE
Confidence 479999999999943 234677877654 664 335555555678999999999885 2 34689999
Q ss_pred EEeCCCC--CC--cCCCCCCCCceeEEEEEEccc
Q 002002 658 VFDNGRY--KR--DEAGKPGKDVRVGKIRVRLST 687 (983)
Q Consensus 658 v~D~d~~--~~--~~~~~~~~d~~lG~~~i~l~~ 687 (983)
||+.... +. ...+....+..||.+.++|-+
T Consensus 290 i~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 290 LYAVVEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp EEEEC----------------CEEEEEEEEESBC
T ss_pred EEEecCCccCccccccccccccceEEEEeeeEEC
Confidence 9996432 10 000011135589999999865
No 105
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=66.25 E-value=40 Score=41.59 Aligned_cols=74 Identities=20% Similarity=0.301 Sum_probs=48.1
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE--CCe---EEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEEeC
Q 002002 6 NRKLIVEVCNAKNLMPKDGQGTASAYVIVDF--DGQ---RRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLYND 80 (983)
Q Consensus 6 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~---~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~~~ 80 (983)
+..++|.|..+....... +...+-||.+.+ |++ ..+|+.+.-+.+|.|||.+.|.+.-.+--....|.|.||+-
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 457889999887522111 224577887765 552 23455444566899999999988653322367899999963
No 106
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=62.31 E-value=8.5 Score=48.09 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=51.6
Q ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCeEEEEEE--CCe----EEeeeCcCCCCCCeeeeEEEEEeeecCCCCCceEEEEEE
Q 002002 5 CNRKLIVEVCNAKNLMPKDGQGTASAYVIVDF--DGQ----RRRTKTKFRDLNPQWDERLEFLVHDAESMPTEILEINLY 78 (983)
Q Consensus 5 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~----~~~T~~~~~t~nP~WnE~f~f~v~~~~~l~~~~L~v~V~ 78 (983)
....+.|+|..+.++... ...+-||.+.+ |++ ...|+.+.-..+|.|||.+.|.+.-.+--....|.|.||
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346899999999998654 35677877555 553 334555544678999999999986543234678999999
Q ss_pred eC
Q 002002 79 ND 80 (983)
Q Consensus 79 ~~ 80 (983)
+.
T Consensus 428 ~~ 429 (1092)
T 2y3a_A 428 AV 429 (1092)
T ss_dssp CC
T ss_pred Ee
Confidence 64
No 107
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=59.43 E-value=24 Score=43.99 Aligned_cols=84 Identities=21% Similarity=0.377 Sum_probs=56.1
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCCCCCcEEEEEE--CCeEE----EeeeeeeccCCCCCCCCcccceEEEEec---CCCCC
Q 002002 428 YLRLTVIQTQDLQPGSGSEPKVRSPELYVKGQL--GAQLF----KTGRTSVGLSPSSSANPTWNEDLVFVAA---EPFEP 498 (983)
Q Consensus 428 ~L~V~Viea~~L~~~~~~~d~~~~sdpyv~v~l--g~~~~----rT~~~~~~~~~~~t~nP~wne~f~f~~~---~~~~~ 498 (983)
.++|+|+.+.++.. +.....+.||.+.+ |++.. .|+.. ...+|.|||.++|.+. -|...
T Consensus 356 ~f~v~i~~~~~~n~-----~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-------~~~~~~Wne~l~f~i~i~dLPr~a 423 (1091)
T 3hhm_A 356 ALRIKILCATYVNV-----NIRDIDKIYVRTGIYHGGEPLCDNVNTQRV-------PCSNPRWNEWLNYDIYIPDLPRAA 423 (1091)
T ss_dssp EEEEEEEEESCCCC-----CCSSCCCCCEEEEEESSSCSSCCEECCCCC-------CTTSCEEEEEEEEEEEGGGCCTTC
T ss_pred CEEEEEEEecCCCC-----CccccceEEEEEEEEECCEEccCceecccc-------CCCCCCCCeeEEecCccccCChhc
Confidence 48999999988764 32335678888776 65433 33322 2457889999999774 46678
Q ss_pred cEEEEEEeCcC-------CceeEEEEEecccc
Q 002002 499 FLVVTVEDVTN-------GCSVGHARIQMSTV 523 (983)
Q Consensus 499 ~L~i~V~D~d~-------d~~lG~~~i~L~~l 523 (983)
.|.|+||+... ...||.+.++|-+.
T Consensus 424 rL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 424 RLCLSICSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp EEEEEECCCCCCC-------CCEEEEEESBCT
T ss_pred EEEEEEEEecCccCcccccceeEEeeeeeEcc
Confidence 99999998641 24567766666554
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=44.73 E-value=77 Score=39.14 Aligned_cols=94 Identities=18% Similarity=0.218 Sum_probs=54.2
Q ss_pred EEEEEEceeccccccccCCCCCCCCCcEEEEE--ECCEE---EEeeeecCCCCCeeceEEEEEEe--c--CCCEEEEEEE
Q 002002 589 LLEVGIRGATNLLPVKTKDGTRGTTDAYVVAK--YGPKW---VRTRTILDRFNPRWNEQYTWDVY--D--PCTVLTIGVF 659 (983)
Q Consensus 589 ~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~~--~~~~~---~rT~~~~~t~nP~Wne~~~~~v~--~--~~~~l~i~v~ 659 (983)
.++|.|+.+......+ +..++-||.+. .|++. .+|..+.-+.+|.|||.++|++. + ....|.|+||
T Consensus 219 ~f~i~i~~~~~~~~~~-----~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-----TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp EEEEEEEEEECSSCCT-----TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred ceEEEEeecccccccC-----CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 5777777775421101 23457787764 46643 34444444557999999998875 2 3458999999
Q ss_pred eCCCCCCcC-------CC-CCCCCceeEEEEEEccc
Q 002002 660 DNGRYKRDE-------AG-KPGKDVRVGKIRVRLST 687 (983)
Q Consensus 660 D~d~~~~~~-------~~-~~~~d~~lG~~~i~l~~ 687 (983)
+....+... ++ ...++..||.+.++|-+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd 329 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLID 329 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBC
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeec
Confidence 854321000 00 00134589999999965
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=44.42 E-value=18 Score=45.29 Aligned_cols=94 Identities=16% Similarity=0.133 Sum_probs=56.7
Q ss_pred cEEEEEEEceeccccccccCCCCCCCCCcEEEE--EECCEE----EEeeeecCCCCCeeceEEEEEEec----CCCEEEE
Q 002002 587 IGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVA--KYGPKW----VRTRTILDRFNPRWNEQYTWDVYD----PCTVLTI 656 (983)
Q Consensus 587 ~g~L~v~v~~a~~L~~~~~~d~~~g~sDpy~~~--~~~~~~----~rT~~~~~t~nP~Wne~~~~~v~~----~~~~l~i 656 (983)
...+.|+|..+.++... ..++-||.+ ..|++. ..|..+.-..+|.|||-++|++.- ..+.|.|
T Consensus 352 ~~~f~i~i~~~~~~~~~-------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ 424 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE-------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCF 424 (1092)
T ss_dssp CSEEEEEECCCCCCCCC-------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEE
T ss_pred CCCEEEEEEEeccCCCC-------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEE
Confidence 35799999999999432 245667654 456643 345554446689999999988752 2458999
Q ss_pred EEEeCCCCCCcC--------------CCCCCCCceeEEEEEEccc
Q 002002 657 GVFDNGRYKRDE--------------AGKPGKDVRVGKIRVRLST 687 (983)
Q Consensus 657 ~v~D~d~~~~~~--------------~~~~~~d~~lG~~~i~l~~ 687 (983)
+||+........ .+....+..||.+.++|-+
T Consensus 425 ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 469 (1092)
T 2y3a_A 425 AVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFD 469 (1092)
T ss_dssp ECCCC------------------------------CCEEEEESBC
T ss_pred EEEEecCccccccccccccccccccccccccccceeEEEeeeeEC
Confidence 999974221000 0000124589999999865
No 110
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=32.60 E-value=1.1e+02 Score=30.41 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=32.0
Q ss_pred EEEEeeeecCCCCCeeceEEEEEEecC---CCEEEEEEEeCCC
Q 002002 624 KWVRTRTILDRFNPRWNEQYTWDVYDP---CTVLTIGVFDNGR 663 (983)
Q Consensus 624 ~~~rT~~~~~t~nP~Wne~~~~~v~~~---~~~l~i~v~D~d~ 663 (983)
..++|-+.+.+-+|.|+|++.+.+... ..-|.++++....
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 466888999999999999999988642 3479999887654
No 111
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=22.53 E-value=2.6e+02 Score=24.84 Aligned_cols=32 Identities=9% Similarity=0.134 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHhHhhhcccc
Q 002002 888 YDRLRALAGRAQTLLGDVAAQGERLEALFNWR 919 (983)
Q Consensus 888 ~~~l~~~~~~vQ~~~~~~a~~~Er~~~l~~w~ 919 (983)
-+.+.++-.-....++.+-.-|||+..|..-+
T Consensus 39 q~evdeVk~IM~~NIdkvLeRGEkLd~L~~KT 70 (119)
T 2kog_A 39 QAQVDEVVDIMRVNVDKVLERDQKLSELDDRA 70 (119)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCCCSSCCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 33344455555556677777777655554443
No 112
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=21.35 E-value=90 Score=19.43 Aligned_cols=18 Identities=22% Similarity=0.678 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 002002 923 ATWIFVVLCLVASLVFYA 940 (983)
Q Consensus 923 ~t~~~~~~~~~~~~~l~~ 940 (983)
++.+.+++..++++++|.
T Consensus 6 A~~lLIviav~aaVllyl 23 (26)
T 3j1r_A 6 ATLLLILIAVAAAVLLYT 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 556666666666666664
No 113
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=21.30 E-value=2e+02 Score=24.18 Aligned_cols=38 Identities=13% Similarity=0.272 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHhHhhhccccChhhH
Q 002002 887 RYDRLRALAGRAQTLLGDVAAQGERLEALFNWRDPRAT 924 (983)
Q Consensus 887 r~~~l~~~~~~vQ~~~~~~a~~~Er~~~l~~w~~p~~t 924 (983)
+.+.|.+-+...|..-........+++.-+-|+.=...
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555666666666677777788888888875543
Done!