Query 002004
Match_columns 983
No_of_seqs 358 out of 1368
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 08:18:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002004.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002004hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d0n_A Horse plasma gelsolin; 100.0 8E-168 3E-172 1532.1 74.2 708 7-738 1-727 (729)
2 1j72_A Macrophage capping prot 100.0 7.4E-84 2.5E-88 729.2 40.4 336 1-345 1-347 (347)
3 3fg6_A Adseverin, scinderin; C 100.0 1.3E-84 4.4E-89 738.9 33.8 360 343-724 2-371 (371)
4 3fg7_A Villin-1; actin binding 100.0 8.9E-87 3.1E-91 761.3 12.4 361 357-735 28-393 (398)
5 2fh1_A Gelsolin; calcium, cont 100.0 1.5E-81 5E-86 709.1 35.9 335 386-738 1-342 (344)
6 3fg6_A Adseverin, scinderin; C 100.0 9E-77 3.1E-81 674.5 34.8 320 1-347 40-369 (371)
7 1j72_A Macrophage capping prot 100.0 3.7E-75 1.3E-79 658.2 38.8 312 391-720 18-347 (347)
8 3fg7_A Villin-1; actin binding 100.0 2.1E-77 7.1E-82 684.0 13.6 313 20-348 63-382 (398)
9 2fh1_A Gelsolin; calcium, cont 100.0 4.2E-74 1.4E-78 648.3 37.5 316 13-348 4-329 (344)
10 1d0n_A Horse plasma gelsolin; 100.0 4.8E-71 1.6E-75 676.8 36.6 319 391-723 12-347 (729)
11 3tu5_B Gelsolin, protein cordo 100.0 1.9E-51 6.6E-56 449.2 16.2 247 6-264 20-269 (297)
12 2ff3_A Gelsolin; protein-prote 100.0 1.7E-43 5.9E-48 349.0 15.8 132 1-132 19-150 (150)
13 3cip_G Gelsolin; actin, dictyo 100.0 5E-43 1.7E-47 338.8 15.8 128 2-129 1-128 (128)
14 1t44_G Chimera of gelsolin dom 100.0 1.7E-42 6E-47 342.4 15.5 133 7-139 3-135 (147)
15 3tu5_B Gelsolin, protein cordo 100.0 5.5E-41 1.9E-45 366.7 15.3 246 393-652 34-292 (297)
16 2vik_A Villin 14T; actin-bindi 100.0 2.7E-38 9.4E-43 304.9 9.6 112 18-130 15-126 (126)
17 2vik_A Villin 14T; actin-bindi 100.0 1.5E-37 5.2E-42 299.7 11.1 120 382-502 6-126 (126)
18 3cip_G Gelsolin; actin, dictyo 100.0 2.1E-35 7.3E-40 285.5 14.5 111 391-501 17-128 (128)
19 1t44_G Chimera of gelsolin dom 100.0 4.2E-35 1.4E-39 289.6 15.2 116 391-506 14-130 (147)
20 2ff3_A Gelsolin; protein-prote 100.0 4.7E-35 1.6E-39 288.9 15.3 113 391-503 36-149 (150)
21 1svq_A Severin; actin-binding; 99.9 1.3E-26 4.3E-31 220.8 9.9 109 127-239 1-109 (114)
22 1kcq_A Gelsolin, brevin, ADF, 99.9 1.2E-24 4.3E-29 203.8 13.2 98 138-240 2-99 (104)
23 1yu8_X Villin; alpha helix, 3- 99.9 5.6E-25 1.9E-29 186.0 6.2 65 919-983 2-67 (67)
24 1qzp_A Dematin; villin headpie 99.9 3.2E-25 1.1E-29 188.9 4.6 64 920-983 2-68 (68)
25 2k6m_S Supervillin; SVHP, HP, 99.9 8E-25 2.7E-29 185.5 6.1 63 919-983 5-67 (67)
26 1ujs_A Actin-binding LIM prote 99.9 2E-24 6.8E-29 191.7 5.0 63 921-983 17-82 (88)
27 1kcq_A Gelsolin, brevin, ADF, 99.9 5E-22 1.7E-26 186.0 11.0 92 520-613 3-99 (104)
28 1svq_A Severin; actin-binding; 99.9 3E-22 1E-26 190.6 8.6 94 518-613 11-110 (114)
29 1und_A Advillin, P92; actin bi 99.7 5.8E-18 2E-22 126.5 3.2 37 947-983 1-37 (37)
30 1wy3_A Villin; structural prot 99.6 6.1E-17 2.1E-21 119.4 3.8 35 949-983 1-35 (35)
31 3eh2_A Protein transport prote 94.8 0.091 3.1E-06 64.8 11.2 111 621-739 619-758 (766)
32 1pcx_A Protein transport prote 94.7 0.065 2.2E-06 66.5 9.5 54 621-674 636-704 (810)
33 3eh1_A Protein transport prote 94.4 0.054 1.9E-06 66.6 7.8 110 621-739 600-746 (751)
34 3efo_B SEC24 related gene fami 94.0 0.13 4.5E-06 63.4 10.1 111 621-739 623-762 (770)
35 3eh2_A Protein transport prote 93.6 0.19 6.5E-06 62.0 10.4 80 253-334 620-729 (766)
36 1m2v_B SEC24, protein transpor 93.4 0.1 3.6E-06 65.4 7.7 52 621-672 752-818 (926)
37 3efo_B SEC24 related gene fami 92.1 0.35 1.2E-05 59.7 9.8 78 253-331 624-731 (770)
38 2nut_A Protein transport prote 89.3 0.46 1.6E-05 58.7 7.3 46 621-670 623-668 (769)
39 3eh1_A Protein transport prote 88.8 0.82 2.8E-05 56.2 8.9 32 271-302 631-662 (751)
40 1m2o_A SEC23, protein transpor 88.7 0.55 1.9E-05 58.0 7.4 45 253-299 626-671 (768)
41 1pcx_A Protein transport prote 88.0 0.87 3E-05 56.5 8.5 31 271-301 673-703 (810)
42 2nut_A Protein transport prote 87.8 0.83 2.8E-05 56.4 8.1 85 253-341 624-726 (769)
43 1m2o_A SEC23, protein transpor 87.5 0.97 3.3E-05 55.8 8.5 47 621-671 625-671 (768)
44 1m2v_B SEC24, protein transpor 85.7 1 3.4E-05 56.6 7.3 29 271-299 789-817 (926)
45 1x67_A Drebrin-like protein; c 68.5 19 0.00064 34.8 9.0 88 19-109 33-129 (146)
46 1x67_A Drebrin-like protein; c 54.7 30 0.001 33.4 7.6 66 414-482 63-129 (146)
47 2kvk_A Actin severing and dyna 46.9 33 0.0011 32.9 6.5 49 419-467 62-112 (144)
48 1hqz_1 ABP1P, actin-binding pr 45.5 50 0.0017 31.3 7.6 57 415-471 59-117 (141)
49 1cfy_A Cofilin; actin-binding, 44.7 56 0.0019 31.0 7.8 88 19-109 25-126 (143)
50 1m4j_A A6 gene product, twinfi 42.2 44 0.0015 31.8 6.6 61 419-481 66-127 (142)
51 1m4j_A A6 gene product, twinfi 38.5 65 0.0022 30.6 7.2 90 19-109 25-128 (142)
52 1f7s_A Actin depolymerizing fa 37.3 82 0.0028 29.8 7.6 57 414-470 59-119 (139)
53 1hqz_1 ABP1P, actin-binding pr 35.9 90 0.0031 29.5 7.7 88 18-108 29-124 (141)
54 1t3y_A Coactosin-like protein; 35.5 73 0.0025 30.4 7.0 60 413-472 49-111 (141)
55 1tvj_A Cofilin; ADF, actin bin 35.5 64 0.0022 31.7 6.7 65 415-482 75-142 (166)
56 1tvj_A Cofilin; ADF, actin bin 33.4 84 0.0029 30.8 7.2 64 44-110 78-143 (166)
57 1cfy_A Cofilin; actin-binding, 33.2 1.2E+02 0.0043 28.5 8.2 54 417-470 59-117 (143)
58 2vac_A Twinfilin-2; transferas 32.9 93 0.0032 29.2 7.2 90 19-109 22-125 (134)
59 2vac_A Twinfilin-2; transferas 32.5 83 0.0028 29.5 6.7 61 419-481 63-124 (134)
60 1cnu_A Actophorin, ADF, cofili 32.5 1.1E+02 0.0038 28.6 7.6 54 417-470 57-113 (137)
61 2i2q_A Cofilin; N-terminal ser 32.0 1.3E+02 0.0046 28.1 8.1 62 417-481 59-123 (137)
62 2xfa_A Actin depolymerization 29.8 1.4E+02 0.0048 28.4 8.0 56 417-472 69-128 (148)
63 2lj8_A Cofilin/actin depolymer 29.4 1.1E+02 0.0038 29.2 7.1 35 434-468 86-120 (144)
64 1f7s_A Actin depolymerizing fa 28.2 78 0.0027 29.9 5.7 87 19-108 27-127 (139)
65 2i2q_A Cofilin; N-terminal ser 25.6 1.3E+02 0.0044 28.2 6.8 90 18-110 24-125 (137)
66 2xfa_A Actin depolymerization 25.5 1.3E+02 0.0044 28.7 6.8 60 44-106 70-132 (148)
67 2kvk_A Actin severing and dyna 24.8 1.3E+02 0.0045 28.6 6.7 105 1-109 1-123 (144)
68 2kd5_A ADF H, actin severing a 23.9 71 0.0024 30.5 4.5 36 433-468 78-113 (144)
69 2lj8_A Cofilin/actin depolymer 23.4 4.5E+02 0.015 24.8 10.2 103 1-107 9-128 (144)
70 1cnu_A Actophorin, ADF, cofili 23.3 2.1E+02 0.0072 26.6 7.8 63 44-109 58-122 (137)
No 1
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=100.00 E-value=7.9e-168 Score=1532.12 Aligned_cols=708 Identities=33% Similarity=0.597 Sum_probs=644.8
Q ss_pred cCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHH
Q 002004 7 SLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTV 86 (983)
Q Consensus 7 ~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tv 86 (983)
++||+|+++|+++|++|||||+|+++|||++.||+||+||||||||||..+++.+.|+||||+|++||+||+|+||++|+
T Consensus 1 ~~~~~f~~~g~~~g~~iWrIe~~~~~~v~~~~~G~Fy~gdsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tv 80 (729)
T 1d0n_A 1 VEHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTV 80 (729)
T ss_dssp CCCTTGGGTTSSSEEEEEEECSSSEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred CcchhhhhcccCCCeEEEEEcCCEEEeCChHhcCcccCCCEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999987788899999999999999999999999999
Q ss_pred HHHHHhCCCceEEEeeccCCCHHHHhhcCCcEEEecCcccCCCccccccc-cccEEEEEecceeEEEEEecCCcCCcCCC
Q 002004 87 ELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGGVASGFRKTEEEE-FETRLYVCKGKRVVRMKQVPFARSSLNHD 165 (983)
Q Consensus 87 eLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~-~~~rLy~vkGk~~v~~~eV~~s~sSLNs~ 165 (983)
|||++|||.||||||+|||||++||+||+++|+|++||++|||+|++++. ..+|||||||+++++++|||++++|||++
T Consensus 81 eLd~~lgg~~vq~Re~Qg~Es~~Fl~~Fk~~i~~~~Gg~~sgf~~v~~~~~~~~rL~~vkG~~~v~~~eV~~s~~SLns~ 160 (729)
T 1d0n_A 81 QLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNG 160 (729)
T ss_dssp HHHHHTTSCCEEEEEETTCCCHHHHHTCSSCEEEESCCTTTTCCCCCCSSCCCCEEEEEECSSSCEEEEECSSGGGCCSS
T ss_pred HHHHHcCCcceEEEEecCCCCHHHHHhccCCcEEeeCCcccCcccccccCCCCcEEEEEECCCcEEEEEEeccHHHcCCC
Confidence 99999999999999999999999999999999999999999999998766 48999999999999999999999999999
Q ss_pred CceEEeCCCeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCCCCCCCChhhHHHHhCCCCCCCCCCCCcc
Q 002004 166 DVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATED 245 (983)
Q Consensus 166 DvFILd~~~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~~~~~~~~~~ 245 (983)
||||||++++||+|+|++||..||.||+++|+.|++.+|+|+|+|++|+||. |+.+||++|||..+++.....+.
T Consensus 161 DvFILd~g~~iy~W~G~~s~~~Er~kA~~~a~~i~~~er~g~~~i~~v~Eg~-----e~~eFw~~LGg~~~~~~~~~~~~ 235 (729)
T 1d0n_A 161 DCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGA-----EPEAMLQVLGPKPTLPEATEDTV 235 (729)
T ss_dssp SEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHSGGGCSEEEEEETTC-----CCHHHHHHHCSCCCCCCCCGGGS
T ss_pred CeEEEEcCCEEEEEECCCCCHHHHHHHHHHHHHHhhhhcCCCccEEEecCCC-----ChHHHHHHcCCCcccCCCCcchh
Confidence 9999999999999999999999999999999999988888999999999995 67899999999987764332111
Q ss_pred c-ccccCCCCeEEEEe--CCceEEEEc----cccccccCCCcEEEeeCC-Ce-EEEEEcCCCCHHHHHHHHHHHHHHHHh
Q 002004 246 D-VIAETTPPKLYSIE--DSQVKIVEG----ELSKSMLENNKCYLLDRG-SE-VFVWVGRVTQVEERKAASQAAEEFISS 316 (983)
Q Consensus 246 ~-~~~~~~~~rLy~v~--~G~l~~~e~----~l~q~~L~~~~vyILD~g-~e-IyVWiGk~as~~eRk~A~~~A~~y~~~ 316 (983)
. .......+|||+|+ +|++++.++ .|+|+||++++||||||| .+ ||||+|++++..||+.||.+|++|++.
T Consensus 236 ~~~~~~~~~~rLy~vs~~~G~l~~~ev~~~~~~~q~~L~~~dv~ILD~g~~~~ifVW~Gk~a~~~er~~A~~~A~~y~~~ 315 (729)
T 1d0n_A 236 KEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISK 315 (729)
T ss_dssp CCCCCCCCCCEEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEECTTSCHHHHTTHHHHHHHHHHH
T ss_pred hhhhccccCcEEEEEECCCCCEEEEEeccCCCCCHHHcCCCCEEEEecCCccEEEEEECCCCCHHHHHHHHHHHHHHHhh
Confidence 1 12235678999998 689988876 399999999999999999 44 999999999999999999999999999
Q ss_pred cCCCCCceEEEecCCCCChhhhhcccCCccCCCCC--CCcccchhhHHhhhhccccccccCCCCCCCCCCCCcccCCccE
Q 002004 317 QNRPKSIRITRVIQGYETYAFKSNFDSWPSGSTAP--GAEEGRGKVAALLKQQGVGIKGMGKSTPTNEEVPPLLEGGGKM 394 (983)
Q Consensus 317 ~~rp~~t~i~~V~eG~Ep~~FK~~F~~W~~~~~~~--~~~~~rgkva~~~~~~~~dv~~l~~~~P~~~e~~~~~d~sG~l 394 (983)
.+||.||+|++|.||.||.+||++|.+|++...+. +.....+++| .++++++|+..|+...+++++.+++||++|++
T Consensus 316 ~~~p~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~~~~~~~~~~~~~~~a-~~~~~~~d~~~l~~~p~~~~~~~~~d~g~g~l 394 (729)
T 1d0n_A 316 MDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAYLSSHIA-HVERVPFDAATLHTSTAMAAQHGMDDDGTGQK 394 (729)
T ss_dssp TTCCTTCEEEEEETTCCCHHHHTTBTTCCCTTCSSSSSCSCCCGGGT-TCCCCCCCTTTGGGCHHHHHHHTCSSCSCSCE
T ss_pred ccCCCCCeEEEEeCCCCCHHHHHHHhcCCCccccccccccccccccc-cccccccChHHhccCcccccccccccCCCCcE
Confidence 99999999999999999999999999999865432 1222223444 45688999999854423566778999999999
Q ss_pred EEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEe
Q 002004 395 EVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRI 474 (983)
Q Consensus 395 ~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv 474 (983)
+||||+++.+++||++.||+||+|||||||||| ..+++.+|+||||||++|+++|+++||++|++|++.|+|.|+|+||
T Consensus 395 ~vWrIe~~~~~~vp~~~~G~Fy~gd~Yivl~ty-~~~g~~~~~iyfW~G~~ss~de~g~aa~~~veLd~~lgg~~vq~R~ 473 (729)
T 1d0n_A 395 QIWRVEGSNKVPVDPATYGQFYGGDSYIILYNY-RHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRV 473 (729)
T ss_dssp EEEEEETTEEEECCGGGTTEEETTSEEEEEEEE-EETTEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTSCSEEEEE
T ss_pred EEEEEeCCEEEECChhhccEEcCCcEEEEEEEE-ecCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCceEEec
Confidence 999999999999999999999999999999999 5788999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcC-C-eEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCceEEEEeccCcCCCCCCCeEE
Q 002004 475 FQGREPPQFVALFQ-P-MVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFL 552 (983)
Q Consensus 475 ~qGkEp~~Fl~iF~-~-~iI~~GG~~s~~~~~~~~~~~~~~~y~~~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d~FI 552 (983)
+||+||+|||+||+ + |||++||+++. + ..+....+|||||+|+.+.+++++||++.++||||+||||
T Consensus 474 ~Qg~E~~~Fl~~F~g~~~ii~~Gg~~~~--~---------~~~~~~~~rLf~vrg~~~~~~~~~eV~~~~ssLns~d~fI 542 (729)
T 1d0n_A 474 VQGKEPAHLMSLFGGKPMIVYKGGTSRE--G---------GQTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFV 542 (729)
T ss_dssp ETTCCCHHHHTTSTTSCEEEESSCCCSS--C---------CCCCCCSSEEEEEEECTTSCEEEEEECCCGGGCCSSSEEE
T ss_pred ccCCCCHHHHHhcCCCeEEEEeCCcccc--C---------ccCCCCCCEEEEEECCCCCceEEEEecCChhhcCcCCeEE
Confidence 99999999999998 4 89999998752 1 1123346799999999888999999999999999999999
Q ss_pred eeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEEecccCCCccccccccCCCcCCCCCCCC-CCC--CCCCcEEEEE
Q 002004 553 LQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVS-PEI--VRDPHLFTFS 629 (983)
Q Consensus 553 L~~~~~iyvW~G~~ss~~er~~A~~va~~l~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~-~~~--~~~prLF~~s 629 (983)
|+++++||+|+|++|+.+||++|+.+|+.|.. ++.+|.||+||++||.+|||+.+|++.... ++. ...||||+||
T Consensus 543 L~~~~~iyvW~G~~s~~~er~~A~~~a~~l~~--~~~~v~EG~E~~~FW~~LGg~~~y~~~~~~~~~~~~~~~~rLf~~s 620 (729)
T 1d0n_A 543 LKTPSAAYLWVGAGASEAEKTGAQELLRVLRA--QPVQVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACS 620 (729)
T ss_dssp EECSSCCBCEECTTCCHHHHHHHHHHHHHHTC--CCCCEETTCCCHHHHHTTTSCCCCCCCCCCSTTHHHHSCCEEEEEE
T ss_pred EecCCeEEEEECCCCCHHHHHHHHHHHHHhcc--CcEEEeCCCChHHHHHhcCCCCccCcccccccccccccCCeEEEEE
Confidence 99999999999999999999999999999984 478899999999999999999999987654 221 4789999999
Q ss_pred ecCCceeEeeec-ccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHhhhcccCCCCCCCcEEEecCCC
Q 002004 630 FNKGAFQVEEVY-NFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGN 708 (983)
Q Consensus 630 ~~~G~~~v~EI~-~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~ 708 (983)
+.+|+|.++||. +|+|+||+++|||||||+++||||||+.|+..||+.||.+|++||++++. +|++.+||++|.+|.
T Consensus 621 ~~~G~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvWiG~~a~~~er~~al~~A~~Y~~~~~~--~r~~~~pi~~V~~G~ 698 (729)
T 1d0n_A 621 NKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPA--HRDRRTPITVVKQGF 698 (729)
T ss_dssp CTTTCCEEEECCSSCCGGGCCTTSEEEEECSSCEEEEECTTSCHHHHSSHHHHHHHHHHHCTT--CCCTTCCEEEEETTC
T ss_pred cCCCcEEEEEecCcccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--cCCCCCcEEEEeCCC
Confidence 999999999999 99999999999999999999999999999999999999999999999775 688889999999999
Q ss_pred CCccccccee-cCCCcccccCchHHHHHHHH
Q 002004 709 EPCFCTTFFS-WDPTKATVQGNSFQKKVALL 738 (983)
Q Consensus 709 EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~ 738 (983)
||+.||++|+ ||+.+|. +++|+++.++|
T Consensus 699 Ep~~F~~~F~~Wd~~~~~--~~~~~~~~~~~ 727 (729)
T 1d0n_A 699 EPPSFVGWFLGWDDSYWS--VDPLDRALAEL 727 (729)
T ss_dssp CCHHHHTTCTTCCGGGGT--SCHHHHHHHHH
T ss_pred CCHHHHhhhhhcCccccC--CccHHHHHHhh
Confidence 9999999999 9999975 57899998876
No 2
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=100.00 E-value=7.4e-84 Score=729.18 Aligned_cols=336 Identities=36% Similarity=0.650 Sum_probs=304.0
Q ss_pred CCCccccCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhh
Q 002004 1 MSTSAKSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGT 80 (983)
Q Consensus 1 ~~~~~~~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~ 80 (983)
|...++.+||+|+++|+++|++||||+++++++||++.||+||+||||||||||...+ |+||||+|++||+||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~iWrie~~~~~~vp~~~~G~Fy~gd~Yivl~t~~~~~----~~i~~W~G~~ss~de~~~ 76 (347)
T 1j72_A 1 MYTAIPQSGSPFPGSVQDPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEEV----SHLHLWIGQQSSRDEQGA 76 (347)
T ss_dssp ----------CCCSTTSSSEEEEEEECSSSEEECCTTTTTEEETTSEEEEEEECSSSC----EEEEEEECTTSCHHHHHH
T ss_pred CccchhhhhhhhhhcccCCCeEEEEEcCCEEEECCHHHcCeecCCCEEEEEEeecCCC----eEEEEEcCCCCCHHHHHH
Confidence 4445567899999999999999999999999999999999999999999999996432 999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCCHHHHhhcCCcEEEecCcccCCCccccccc-cccEEEEEecceeEEEEEecCCc
Q 002004 81 AAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGGVASGFRKTEEEE-FETRLYVCKGKRVVRMKQVPFAR 159 (983)
Q Consensus 81 AA~~tveLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~-~~~rLy~vkGk~~v~~~eV~~s~ 159 (983)
||++|++||++|||.++||||+||+||++||+||+++|+|++||+++||+|++.+. ..+|||||||+++++++|||+++
T Consensus 77 aa~~t~~ld~~lgg~~vq~R~~Qg~Es~~Fl~~F~~~~~i~~Gg~~sgf~~~~~~~~~~~rL~~v~G~~~v~~~eV~~~~ 156 (347)
T 1j72_A 77 CAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQRLYQVKGKKNIRATERALNW 156 (347)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEETTSCCHHHHTTCSSCCEEECSSCCTTCCCCCCCCCEEEEEEEEECSSSCEEEEECSSG
T ss_pred HHHHHHHHHHHhCCCCcEEEeeCCCCCHHHHHhhCCCeEEeeCCccccccccccCCCCCcEEEEEECCCceEEEEEeeeH
Confidence 99999999999999999999999999999999999999999999999999998655 57999999999999999999999
Q ss_pred CCcCCCCceEEeCCCeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCCCCCCCChhhHHHHhCCCCCCCC
Q 002004 160 SSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGK 239 (983)
Q Consensus 160 sSLNs~DvFILd~~~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~~~~ 239 (983)
+|||++||||||++++||+|+|++||..||.+|+++|+.|++.+++|+++|++|+||. |+.+||.+|||..++..
T Consensus 157 ~sLns~d~FIL~~~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~~~~g~~~v~~v~EG~-----E~~~Fw~~LGg~~~~~~ 231 (347)
T 1j72_A 157 DSFNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGE-----EPAEMIQVLGPKPALKE 231 (347)
T ss_dssp GGCBTTSEEEEEETTEEEEEECTTCCHHHHHHHHHHHHHHHTTSCCSSCEEEEEETTC-----CCHHHHHHHCSCCCCBC
T ss_pred HHcCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCceEEEEeCCC-----CHHHHHHHhCCCccccc
Confidence 9999999999999999999999999999999999999999998898999999999995 77899999999877765
Q ss_pred CCCCccc--ccccCCCCeEEEEe--CCceEEEEc----cccccccCCCcEEEeeCC--CeEEEEEcCCCCHHHHHHHHHH
Q 002004 240 KVATEDD--VIAETTPPKLYSIE--DSQVKIVEG----ELSKSMLENNKCYLLDRG--SEVFVWVGRVTQVEERKAASQA 309 (983)
Q Consensus 240 ~~~~~~~--~~~~~~~~rLy~v~--~G~l~~~e~----~l~q~~L~~~~vyILD~g--~eIyVWiGk~as~~eRk~A~~~ 309 (983)
....++. .......+|||+|+ +|.+.+.|+ .|+|++|++++||||||| ++||||+|++++..||+.|+.+
T Consensus 232 ~~~~~d~~~~~~~~~~~rLy~vs~~~G~~~v~ev~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~~~er~~A~~~ 311 (347)
T 1j72_A 232 GNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQV 311 (347)
T ss_dssp SCCSSCCTTSSSSSCCCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHHHHHHHHH
T ss_pred CCcchhhhhhhhcccCCEEEEEECCCCCEEEEeeccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCCHHHHHHHHHH
Confidence 4432221 11224679999997 789988887 499999999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCCCceEEEecCCCCChhhhhcccCCc
Q 002004 310 AEEFISSQNRPKSIRITRVIQGYETYAFKSNFDSWP 345 (983)
Q Consensus 310 A~~y~~~~~rp~~t~i~~V~eG~Ep~~FK~~F~~W~ 345 (983)
|++|++..+||.+++|.+|.||.||..||++|.+|+
T Consensus 312 A~~y~~~~~rp~~~~i~~v~eG~Ep~~Fk~~F~~W~ 347 (347)
T 1j72_A 312 AEGFISRMQYAPNTQVEILPQGRESPIFKQFFKDWK 347 (347)
T ss_dssp HHHHHHHHTCCTTCEEEEEETTCCCTTTCCBSTTCC
T ss_pred HHHHHHhcCCCCCCeEEEEcCCCCCHHHHHHhhcCC
Confidence 999999999999999999999999999999999996
No 3
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-84 Score=738.87 Aligned_cols=360 Identities=29% Similarity=0.575 Sum_probs=274.1
Q ss_pred CCccCCCCC--CCcccchhhHHhhhhccccccccCCCCC-CCCCCCCcccCCccEEEEEEeCCccccCCCCccceeeeCc
Q 002004 343 SWPSGSTAP--GAEEGRGKVAALLKQQGVGIKGMGKSTP-TNEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGD 419 (983)
Q Consensus 343 ~W~~~~~~~--~~~~~rgkva~~~~~~~~dv~~l~~~~P-~~~e~~~~~d~sG~l~VWRIe~~~~~~v~~~~~G~FysgD 419 (983)
+|.+..++. +.....+++|++ .+.++|+..| |..| ++++.+|+|||+|+|+||||+++.+++||++.||+||+||
T Consensus 2 ~w~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l-~~~~~~~~~~~~~d~g~g~l~vWrIe~~~~~~vp~~~~G~Fy~gD 79 (371)
T 3fg6_A 2 DWRDKDQSDGFGKVYVTEKVAQI-KQIPFDASKL-HSSPQMAAQHNMVDDGSGKVEIWRVENNGRIQVDQNSYGEFYGGD 79 (371)
T ss_dssp ----------------------------------------------------CEEEEEEECSSSEEECCGGGTTEECTTC
T ss_pred CCccccccccCCccccccccccc-cccccChhhc-cCCccchhhccCccCCCCcEEEEEEECCeeeeCChHHcCeEecCc
Confidence 577665443 223334566665 4789999998 6666 5888899999999999999999999999999999999999
Q ss_pred EEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCHHHHhhcC-C-eEEEeCcc
Q 002004 420 CYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQ-P-MVVVKGGL 497 (983)
Q Consensus 420 cYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~~Fl~iF~-~-~iI~~GG~ 497 (983)
|||||||| +..|+||||+|++|++||+++||++|++||+.|+|.|+|+||+||+||++||++|+ + |||++||.
T Consensus 80 ~YIvl~ty-----~~~~~i~~W~G~~ss~de~g~aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~Gg~ 154 (371)
T 3fg6_A 80 CYIILYTY-----PRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNGT 154 (371)
T ss_dssp EEEEEEEC-----SSCEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC----
T ss_pred eEEEEEEe-----cCCeEEEEeeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEcCCc
Confidence 99999999 34699999999999999999999999999999999999999999999999999999 4 78899998
Q ss_pred ccCCccccccCCCCCccccCCceeEEEEEecCCCceEEEEeccCcCCCCCCCeEEeeeC-CeEEEEECCCCCHHHHHHHH
Q 002004 498 CSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSG-STMFTWHGNQSTFEQQQLAA 576 (983)
Q Consensus 498 ~s~~~~~~~~~~~~~~~y~~~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d~FIL~~~-~~iyvW~G~~ss~~er~~A~ 576 (983)
++.+.+. ....+|||||+|+.+.+++++||++.++||||+|||||+++ +.||+|+|++|+.+||.+|+
T Consensus 155 ~~~~~~~-----------~~~~~rL~~vrg~~~~~vr~~EV~~~~ssLns~d~FILd~~~~~iyvW~G~~ss~~Er~~A~ 223 (371)
T 3fg6_A 155 SKKGGQA-----------PAPPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAE 223 (371)
T ss_dssp ---------------------CCEEEEEECCSSSCCEEEEECSSGGGCBTTSEEEEECTTSEEEEEECTTCCHHHHHHHH
T ss_pred cCCCccC-----------CcCccEEEEEeccCCCceEEEEecCCHHHccCCCeEEEEcCCCeEEEEECCCCCHHHHHHHH
Confidence 7654321 12357999999998889999999999999999999999999 99999999999999999999
Q ss_pred HHHHHhCCCceEEecccCCCccccccccCCCcCCCCCCCCCCC--CCCCcEEEEEecCCceeEeeec-ccCccCCCCCCE
Q 002004 577 KVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI--VRDPHLFTFSFNKGAFQVEEVY-NFSQDDLLTEDI 653 (983)
Q Consensus 577 ~va~~l~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~~~~--~~~prLF~~s~~~G~~~v~EI~-~F~QdDL~~~dv 653 (983)
.+|+.|+. ...+|+||+||++||.+|||+.+|++.....+. ...||||+||+.+|.|.++||. +|+|+||+++||
T Consensus 224 ~~a~~i~~--~~~~v~EG~Ep~~Fw~~LGg~~~~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv 301 (371)
T 3fg6_A 224 YVASVLKC--KTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDV 301 (371)
T ss_dssp HHHHHTTC--EEEEEETTCCCHHHHHHTTSCCCCBCCTTTSSCCCSSCCEEEEEECTTSSCEEEECCSSCCGGGSCTTSE
T ss_pred HHHHHhcC--CeEEEeCCCCCHHHHHHcCCCcccCcchhhcccccccCcEEEEEEcCCCcEEEEEecccccHhHCCCCCE
Confidence 99999975 346789999999999999999999876554433 3569999999999999999998 999999999999
Q ss_pred EEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHhhhcccCCCCCCCcEEEecCCCCCccccccee-cCCCcc
Q 002004 654 LILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKA 724 (983)
Q Consensus 654 ~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~ 724 (983)
|||||+.+||||+|+.|+..||+.||.+|++||++++. +|++.+||++|.||.||+.||++|. ||+.+|
T Consensus 302 ~ILD~~~~IfVW~G~~as~~Er~~A~~~A~~yi~~~~~--~r~~~t~i~~v~eG~Ep~~Fk~~F~~W~~~~~ 371 (371)
T 3fg6_A 302 MLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLETDPS--GRDKRTPIVIIKQGHEPPTFTGWFLGWDSSKW 371 (371)
T ss_dssp EEEECSSCEEEEECTTCCHHHHHHHHHHHTTCC------------CCEEEEETTCCCHHHHTTSSSCCTTCC
T ss_pred EEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--CCCCCCCEEEecCCCCCHHHHhhhccCCcccC
Confidence 99999999999999999999999999999999999875 6888999999999999999999999 999886
No 4
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=100.00 E-value=8.9e-87 Score=761.32 Aligned_cols=361 Identities=32% Similarity=0.586 Sum_probs=99.6
Q ss_pred chhhHHhhhhccccccccCCCCCC-CCCCCCcccCCccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCce
Q 002004 357 RGKVAALLKQQGVGIKGMGKSTPT-NEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKED 435 (983)
Q Consensus 357 rgkva~~~~~~~~dv~~l~~~~P~-~~e~~~~~d~sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~ 435 (983)
.+++|++ .+.++|+..| +++|. +++.+|+||++|+|+||||+++.+++||++.||+||+||||||||||. .+++.+
T Consensus 28 ~~~~ak~-~~~~~d~~~l-~~~~~~aa~~~~~dd~~g~l~iWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty~-~~g~~~ 104 (398)
T 3fg7_A 28 VGSVAKV-EQVKFDATSM-HVKPQVAAQQKMVDDGSGEVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYL-IGEKQH 104 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeec-cccccchhhh-hcChhHHHHhcCCCCCCCcEEEEEEeCCEEEECChHhcCeecCCCeEEEEEEEe-cCCcce
Confidence 4566654 4678999998 56774 777889999999999999999999999999999999999999999994 778899
Q ss_pred eEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCcc
Q 002004 436 YFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDET 514 (983)
Q Consensus 436 ~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~~~~~~~~~~~~~ 514 (983)
|+||||+|++|++||+++||++|++||+.|+|.|||+||+||+||++||++|+ ++||++||+++... +
T Consensus 105 ~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~QG~Es~~Fls~Fkg~iii~~Gg~~~~~~-----------~ 173 (398)
T 3fg7_A 105 YLLYVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTSRTNN-----------L 173 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeecCCCCHHHHHHhCCeEEEeeCCcccCCc-----------c
Confidence 99999999999999999999999999999999999999999999999999999 58899999874321 1
Q ss_pred ccCCceeEEEEEecCCCceEEEEeccCcCCCCCCCeEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEEecccC
Q 002004 515 YTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIKHAKEG 594 (983)
Q Consensus 515 y~~~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d~FIL~~~~~iyvW~G~~ss~~er~~A~~va~~l~~~~~~~~v~EG 594 (983)
.....+|||||+|+.+.+++++||++.++||||+|||||++++.||+|+|++|+.+||.+|+.+|+.|+. .++.+|.||
T Consensus 174 ~~~~~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd~~~~iyvW~G~~ss~~Er~~A~~va~~i~~-~~~~~v~EG 252 (398)
T 3fg7_A 174 ETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCSGDEREMAKMVADTISR-TEKQVVVEG 252 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCcEEEEEECCCCCceEEEEecCCHHHccCCceEEEEeCCeEEEEeCCCCCHHHHHHHHHHHHHhcC-CcEEEEeCC
Confidence 1234579999999987899999999999999999999999999999999999999999999999999964 677889999
Q ss_pred CCccccccccCCCcCCCCCCCCCCC--CCCCcEEEEEecCCceeEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCH
Q 002004 595 TESSAFWFPLGGKQSYTSKKVSPEI--VRDPHLFTFSFNKGAFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDS 672 (983)
Q Consensus 595 ~E~~~FW~~LGgk~~y~~~~~~~~~--~~~prLF~~s~~~G~~~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~ 672 (983)
+||++||.+|||+.+|++....++. ...||||+||+.+|.|.++||.+|+|+||+++|||||||+.+||||+|+.|+.
T Consensus 253 ~Ep~~Fw~~LGg~~~~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as~ 332 (398)
T 3fg7_A 253 QEPANFWMALGGKAPYANTKRLQEENLVITPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANE 332 (398)
T ss_dssp -------------------------CCCCCCEEEEEECTTSSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCCH
T ss_pred CCchhHHHHhCCCccCCChhhhccchhcccCeeEEEEcCCCCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCCH
Confidence 9999999999999999876554332 36899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCcEEEecCCCCCccccccee-cCCCcccccCchHHHHH
Q 002004 673 KEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKV 735 (983)
Q Consensus 673 ~ek~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~ 735 (983)
.||+.||.+|++||++++. +|++.+||++|.+|.||+.||++|. ||+.+|.. +.||+++.
T Consensus 333 ~Er~~Al~~A~~yi~~~~~--~r~~~tpi~~V~eG~Ep~~Fk~~F~~Wd~~~~~~-~~~~~~~~ 393 (398)
T 3fg7_A 333 EEKKAAATTAQEYLKTHPS--GRDPETPIIVVKQGHEPPTFTGWFLAWDPFKWSG-IHVVPNLS 393 (398)
T ss_dssp HHHHHHHHHHHHHHHHSSS--SCCTTCCEEEEETTCCCHHHHTTSSCCCTTCC-----------
T ss_pred HHHHHHHHHHHHHHHhCcc--cCCCCCCEEEEcCCCCCHHHHHhhhcCChhhhcc-cCCHHHhh
Confidence 9999999999999999876 6788999999999999999999999 99999984 99999873
No 5
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=100.00 E-value=1.5e-81 Score=709.11 Aligned_cols=335 Identities=30% Similarity=0.563 Sum_probs=291.3
Q ss_pred CcccCCccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHc
Q 002004 386 PLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSL 465 (983)
Q Consensus 386 ~~~d~sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l 465 (983)
|+|||+|+++||||+++.+++||++.||+||+||||||||||. .+++..|+||||+|++|+++|+++||++|++|++.+
T Consensus 1 ~~ddg~g~~~vwrIe~~~~~~v~~~~~G~Fy~gD~YIvl~ty~-~~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~l 79 (344)
T 2fh1_A 1 MDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYR-HGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEEL 79 (344)
T ss_dssp CCSCSCSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEE-ETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEEcCCeEEECCHHHcCeecCCCeEEEEEEee-cCCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999999995 667789999999999999999999999999999999
Q ss_pred CCCCeEEEeecCCCCHHHHhhcCC--eEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCceEEEEeccCcC
Q 002004 466 KGRPVQGRIFQGREPPQFVALFQP--MVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVAT 543 (983)
Q Consensus 466 ~g~~vq~Rv~qGkEp~~Fl~iF~~--~iI~~GG~~s~~~~~~~~~~~~~~~y~~~~~~Lf~V~G~~~~~~~aveV~~~as 543 (983)
+|.|+|+||+||+||+|||++|++ +||++||.+..+.. . ....+|||||+|+.+.+++++||++.++
T Consensus 80 gg~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~gg~~~~~~~--------~---~~~~~rL~~v~g~~~~~~~~~eV~~~~s 148 (344)
T 2fh1_A 80 GGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQ--------T---APASTRLFQVRANSAGATRAVEVLPKAG 148 (344)
T ss_dssp TSCSEEEEEETTCCCHHHHGGGTTCCEEEESCCCCTTTCS--------C---CCCSSEEEEEEECTTCCEEEEEECCSGG
T ss_pred CCCceEEEeecCCCCHHHHHhhCCCeEEEEcCCcccCCcc--------C---CCCCceEEEEECCCCCceEEEEecCchh
Confidence 999999999999999999999996 78899986432211 1 1235799999998888999999999999
Q ss_pred CCCCCCeEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEEecccCCCccccccccCCCcCCCCCCCCC---CCC
Q 002004 544 SLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSP---EIV 620 (983)
Q Consensus 544 sLnS~d~FIL~~~~~iyvW~G~~ss~~er~~A~~va~~l~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~~---~~~ 620 (983)
||||+|||||+++++||+|+|++|+.+||.+|+.+|+.|+ .++.+|.||+||++||.+|||+.+|+.....+ ...
T Consensus 149 sLns~d~FIL~~~~~iyvW~G~~s~~~er~~A~~~a~~l~--~~i~~v~EG~E~~~Fw~~LGg~~~y~~~~~~~~~~~~~ 226 (344)
T 2fh1_A 149 ALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLR--AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDA 226 (344)
T ss_dssp GCBTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHTT--CCCEEEETTCCCHHHHHHTTSCCCCBCCHHHHCSCC--
T ss_pred hcCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHhC--CCcEEEeCCCCcHHHHHhcCCCCccccccccccccccc
Confidence 9999999999999999999999999999999999999995 56788999999999999999999888654321 224
Q ss_pred CCCcEEEEEecCCceeEeeec-ccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 002004 621 RDPHLFTFSFNKGAFQVEEVY-NFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKV 699 (983)
Q Consensus 621 ~~prLF~~s~~~G~~~v~EI~-~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~~ 699 (983)
..||||+||+.+|.|.++||. +|+|+||+++|||||||+.+||||+|+.|+..||+.||.+|++|+++.+. +|++.+
T Consensus 227 ~~~rLf~~s~~~G~~~v~ev~~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~--~r~~~t 304 (344)
T 2fh1_A 227 HPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPA--NRDRRT 304 (344)
T ss_dssp CCCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHTC---------C
T ss_pred cCCEEEEEEcCCCCEEEEEccCCcCHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--CCCCCC
Confidence 789999999999999999998 99999999999999999999999999999999999999999999998765 688899
Q ss_pred cEEEecCCCCCccccccee-cCCCcccccCchHHHHHHHH
Q 002004 700 PLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKVALL 738 (983)
Q Consensus 700 pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~ 738 (983)
||++|.||.||+.||++|. ||+.+|. +++|++++++|
T Consensus 305 ~i~~V~eG~Ep~~Fk~~F~~W~~~~~~--~~~~~~~~~~~ 342 (344)
T 2fh1_A 305 PITVVKQGFEPPSFVGWFLGWDDDYWS--VDPLDRAMAEL 342 (344)
T ss_dssp CEEEEETTCCCHHHHTTSSSCCTTCC--------------
T ss_pred cEEEEcCCCCCHHHHHHHhhcChhhcC--CChHHHHHHHh
Confidence 9999999999999999999 9999985 58899998876
No 6
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=100.00 E-value=9e-77 Score=674.54 Aligned_cols=320 Identities=32% Similarity=0.513 Sum_probs=263.3
Q ss_pred CCCccccCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhh
Q 002004 1 MSTSAKSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGT 80 (983)
Q Consensus 1 ~~~~~~~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~ 80 (983)
|+..+..+|. |. .|++|||||++++++||++.||+||+||||||||||. ..|+||||+|++||+||+|+
T Consensus 40 ~~~~~~~~d~---g~---g~l~vWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty~-----~~~~i~~W~G~~ss~de~g~ 108 (371)
T 3fg6_A 40 MAAQHNMVDD---GS---GKVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYP-----RGQIIYTWQGANATRDELTT 108 (371)
T ss_dssp ------------------CEEEEEEECSSSEEECCGGGTTEECTTCEEEEEEECS-----SCEEEEEEECTTCCHHHHHH
T ss_pred chhhccCccC---CC---CcEEEEEEECCeeeeCChHHcCeEecCceEEEEEEec-----CCeEEEEeeCCCCChhHHHH
Confidence 4444445554 33 4699999999999999999999999999999999992 46999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCCHHHHhhcCCc-EEEecCcccCCCccccccccccEEEEEecc--eeEEEEEecC
Q 002004 81 AAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPC-IIPLEGGVASGFRKTEEEEFETRLYVCKGK--RVVRMKQVPF 157 (983)
Q Consensus 81 AA~~tveLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~-ii~~~Gg~~sgf~~~e~~~~~~rLy~vkGk--~~v~~~eV~~ 157 (983)
||++|++||++|||.|+||||+||+||++||+||+++ ||+++||+++++.+. ....+|||||||+ +++++.||++
T Consensus 109 aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~Gg~~~~~~~~--~~~~~rL~~vrg~~~~~vr~~EV~~ 186 (371)
T 3fg6_A 109 SAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNGTSKKGGQA--PAPPTRLFQVRRNLASITRIVEVDV 186 (371)
T ss_dssp HHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC----------------CCEEEEEECCSSSCCEEEEECS
T ss_pred HHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEcCCccCCCccC--CcCccEEEEEeccCCCceEEEEecC
Confidence 9999999999999999999999999999999999998 899999987655433 2346899999998 6799999999
Q ss_pred CcCCcCCCCceEEeCC-CeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCCCCCCCChhhHHHHhCCCCC
Q 002004 158 ARSSLNHDDVFILDTK-DKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAP 236 (983)
Q Consensus 158 s~sSLNs~DvFILd~~-~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~ 236 (983)
+++||||+||||||++ ++||+|+|++||..||.+|+++|+.|+.+ +++|+||. |+.+||++|||..+
T Consensus 187 ~~ssLns~d~FILd~~~~~iyvW~G~~ss~~Er~~A~~~a~~i~~~-------~~~v~EG~-----Ep~~Fw~~LGg~~~ 254 (371)
T 3fg6_A 187 DANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVLKCK-------TLRIQEGE-----EPEEFWNSLGGKKD 254 (371)
T ss_dssp SGGGCBTTSEEEEECTTSEEEEEECTTCCHHHHHHHHHHHHHTTCE-------EEEEETTC-----CCHHHHHHTTSCCC
T ss_pred CHHHccCCCeEEEEcCCCeEEEEECCCCCHHHHHHHHHHHHHhcCC-------eEEEeCCC-----CCHHHHHHcCCCcc
Confidence 9999999999999999 99999999999999999999999999742 36788884 77899999999987
Q ss_pred CCCCCCCcccccccCCCCeEEEEe--CCceEEEEcc--ccccccCCCcEEEeeCCCeEEEEEcCCCCHHHHHHHHHHHHH
Q 002004 237 IGKKVATEDDVIAETTPPKLYSIE--DSQVKIVEGE--LSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEE 312 (983)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~rLy~v~--~G~l~~~e~~--l~q~~L~~~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~ 312 (983)
+.......+ ......+|||+|+ +|.+.+.|+. |+|+||++++||||||+.+||||+|++++..||+.||.+|++
T Consensus 255 ~~~~~~~~~--~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~ILD~~~~IfVW~G~~as~~Er~~A~~~A~~ 332 (371)
T 3fg6_A 255 YQTSPLLET--QAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKM 332 (371)
T ss_dssp CBCCTTTSS--CCCSSCCEEEEEECTTSSCEEEECCSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHTT
T ss_pred cCcchhhcc--cccccCcEEEEEEcCCCcEEEEEecccccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHH
Confidence 764322111 1234579999998 6999999885 999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCCCCceEEEecCCCCChhhhhcccCCccC
Q 002004 313 FISSQ--NRPKSIRITRVIQGYETYAFKSNFDSWPSG 347 (983)
Q Consensus 313 y~~~~--~rp~~t~i~~V~eG~Ep~~FK~~F~~W~~~ 347 (983)
|++.. +||.+|+|.+|.||.||..||++|++|+..
T Consensus 333 yi~~~~~~r~~~t~i~~v~eG~Ep~~Fk~~F~~W~~~ 369 (371)
T 3fg6_A 333 YLETDPSGRDKRTPIVIIKQGHEPPTFTGWFLGWDSS 369 (371)
T ss_dssp CC----------CCEEEEETTCCCHHHHTTSSSCCTT
T ss_pred HHHhCccCCCCCCCEEEecCCCCCHHHHhhhccCCcc
Confidence 99987 689899999999999999999999999875
No 7
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=100.00 E-value=3.7e-75 Score=658.17 Aligned_cols=312 Identities=25% Similarity=0.498 Sum_probs=285.3
Q ss_pred CccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 391 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 391 sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
+..++||||+++.+++||++.||+||+||||||||||. .. .|+||||+|++|++||+++||++|++||+.|+|.|+
T Consensus 18 ~~g~~iWrie~~~~~~vp~~~~G~Fy~gd~Yivl~t~~-~~---~~~i~~W~G~~ss~de~~~aa~~t~~ld~~lgg~~v 93 (347)
T 1j72_A 18 DPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGP-EE---VSHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPV 93 (347)
T ss_dssp SSEEEEEEECSSSEEECCTTTTTEEETTSEEEEEEECS-SS---CEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCSE
T ss_pred CCCeEEEEEcCCEEEECCHHHcCeecCCCEEEEEEeec-CC---CeEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45799999999999999999999999999999999994 33 299999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCceEEEEeccCcCCCCCCC
Q 002004 471 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSE 549 (983)
Q Consensus 471 q~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~~~~~~~~~~~~~y~~~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d 549 (983)
|+|++||+||+|||++|+ +++|++||++++|+++..+ ....+|||||+|+ .+++++||++.++||||+|
T Consensus 94 q~R~~Qg~Es~~Fl~~F~~~~~i~~Gg~~sgf~~~~~~--------~~~~~rL~~v~G~--~~v~~~eV~~~~~sLns~d 163 (347)
T 1j72_A 94 QHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPN--------EVVVQRLYQVKGK--KNIRATERALNWDSFNTGD 163 (347)
T ss_dssp EEEEETTSCCHHHHTTCSSCCEEECSSCCTTCCCCCCC--------CCEEEEEEEEECS--SSCEEEEECSSGGGCBTTS
T ss_pred EEEeeCCCCCHHHHHhhCCCeEEeeCCccccccccccC--------CCCCcEEEEEECC--CceEEEEEeeeHHHcCCCc
Confidence 999999999999999999 5999999999999875321 1124799999996 5899999999999999999
Q ss_pred eEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-----CceEEecccCCCccccccccCCCcCCCCCCCC------CC
Q 002004 550 CFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-----GVAIKHAKEGTESSAFWFPLGGKQSYTSKKVS------PE 618 (983)
Q Consensus 550 ~FIL~~~~~iyvW~G~~ss~~er~~A~~va~~l~~-----~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~------~~ 618 (983)
||||++++.||+|+|++|+.+||.+|+.+|..|+. ..++.++.||+||++||.+|||+..|+..... ..
T Consensus 164 ~FIL~~~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~~~~g~~~v~~v~EG~E~~~Fw~~LGg~~~~~~~~~~~d~~~~~~ 243 (347)
T 1j72_A 164 CFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGNPEEDLTADKA 243 (347)
T ss_dssp EEEEEETTEEEEEECTTCCHHHHHHHHHHHHHHHTTSCCSSCEEEEEETTCCCHHHHHHHCSCCCCBCSCCSSCCTTSSS
T ss_pred eEEEecCCEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCceEEEEeCCCCHHHHHHHhCCCcccccCCcchhhhhhhh
Confidence 99999999999999999999999999999999952 34688999999999999999999888765431 12
Q ss_pred CCCCCcEEEEEecCCceeEeee---cccCccCCCCCCEEEEeCC--CEEEEEEcCCCCHHHHHHHHHHHHHHHhhhcccC
Q 002004 619 IVRDPHLFTFSFNKGAFQVEEV---YNFSQDDLLTEDILILDTH--AEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLE 693 (983)
Q Consensus 619 ~~~~prLF~~s~~~G~~~v~EI---~~F~QdDL~~~dv~ILD~~--~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~ 693 (983)
....||||+|++.+|.+.++|| .+|+|+||+++|||||||+ .+||||+|++|+..||+.|+.+|++|++..
T Consensus 244 ~~~~~rLy~vs~~~G~~~v~ev~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~~~er~~A~~~A~~y~~~~---- 319 (347)
T 1j72_A 244 NAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRM---- 319 (347)
T ss_dssp SSCCCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHHHHHHHHHHHHHHHHH----
T ss_pred cccCCEEEEEECCCCCEEEEeeccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHhc----
Confidence 2367999999999999999999 5999999999999999999 999999999999999999999999999985
Q ss_pred CCCCCCcEEEecCCCCCccccccee-cC
Q 002004 694 GLSPKVPLYKVTEGNEPCFCTTFFS-WD 720 (983)
Q Consensus 694 ~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd 720 (983)
+|++.+||.+|.||.||..||++|. |+
T Consensus 320 ~rp~~~~i~~v~eG~Ep~~Fk~~F~~W~ 347 (347)
T 1j72_A 320 QYAPNTQVEILPQGRESPIFKQFFKDWK 347 (347)
T ss_dssp TCCTTCEEEEEETTCCCTTTCCBSTTCC
T ss_pred CCCCCCeEEEEcCCCCCHHHHHHhhcCC
Confidence 6788999999999999999999999 96
No 8
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=100.00 E-value=2.1e-77 Score=684.04 Aligned_cols=313 Identities=30% Similarity=0.507 Sum_probs=92.6
Q ss_pred cEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHHHHHHHhCCCceEE
Q 002004 20 GTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQH 99 (983)
Q Consensus 20 gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~vq~ 99 (983)
+++||||+++++++||++.||+||+||||||||||. .+++..|+||||+|++||+||+|+||++|++||++|||.|+||
T Consensus 63 ~l~iWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty~-~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~ 141 (398)
T 3fg7_A 63 EVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYL-IGEKQHYLLYVWQGSQASQDEITASAYQAVILDQKYNGEPVQI 141 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEeCCEEEECChHhcCeecCCCeEEEEEEEe-cCCcceEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEE
Confidence 499999999999999999999999999999999997 4678899999999999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhhcCCcEEEecCcccCCCccccccccccEEEEEecce--eEEEEEecCCcCCcCCCCceEEeCCCeEE
Q 002004 100 RELQGHESDKFLSYFKPCIIPLEGGVASGFRKTEEEEFETRLYVCKGKR--VVRMKQVPFARSSLNHDDVFILDTKDKIY 177 (983)
Q Consensus 100 Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rLy~vkGk~--~v~~~eV~~s~sSLNs~DvFILd~~~~Iy 177 (983)
||+||+||++||+||+++|||++||+++... +.....+|||||||++ +++++|||++++||||+||||||++++||
T Consensus 142 Re~QG~Es~~Fls~Fkg~iii~~Gg~~~~~~--~~~~~~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd~~~~iy 219 (398)
T 3fg7_A 142 RVPMGKEPPHLMSIFKGRMVVYQGGTSRTNN--LETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCY 219 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeecCCCCHHHHHHhCCeEEEeeCCcccCCc--cCccCCcEEEEEECCCCCceEEEEecCCHHHccCCceEEEEeCCeEE
Confidence 9999999999999999999999999875322 1223468999999997 68999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCCCCCCCChhhHHHHhCCCCCCCCCCCCcccccccCCCCeEE
Q 002004 178 QFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLY 257 (983)
Q Consensus 178 ~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~~~~~~~~~~~~~~~~~~~rLy 257 (983)
+|+|++||..||.+|+++|+.|++ +++.+|+||. |+.+||.+|||..++.......+ ......+|||
T Consensus 220 vW~G~~ss~~Er~~A~~va~~i~~------~~~~~v~EG~-----Ep~~Fw~~LGg~~~~~~~~~~~~--~~~~~~~rLf 286 (398)
T 3fg7_A 220 LWCGKGCSGDEREMAKMVADTISR------TEKQVVVEGQ-----EPANFWMALGGKAPYANTKRLQE--ENLVITPRLF 286 (398)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcC------CcEEEEeCCC-----CchhHHHHhCCCccCCChhhhcc--chhcccCeeE
Confidence 999999999999999999999963 5778899885 77889999999877653221111 1124579999
Q ss_pred EEe--CCceEEEEcc-ccccccCCCcEEEeeCCCeEEEEEcCCCCHHHHHHHHHHHHHHHHhc--CCCCCceEEEecCCC
Q 002004 258 SIE--DSQVKIVEGE-LSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGY 332 (983)
Q Consensus 258 ~v~--~G~l~~~e~~-l~q~~L~~~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~y~~~~--~rp~~t~i~~V~eG~ 332 (983)
+|+ +|.+.+.|+. |+|+||++++|||||||.+||||+|++++..||+.||..|++|++.. +||.+|+|.+|.||.
T Consensus 287 ~~s~~~G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as~~Er~~Al~~A~~yi~~~~~~r~~~tpi~~V~eG~ 366 (398)
T 3fg7_A 287 ECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEYLKTHPSGRDPETPIIVVKQGH 366 (398)
T ss_dssp EEECTTSSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHHSSSSCCTTCCEEEEETTC
T ss_pred EEEcCCCCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcccCCCCCCEEEEcCCC
Confidence 998 7999999987 99999999999999999999999999999999999999999999987 678789999999999
Q ss_pred CChhhhhcccCCccCC
Q 002004 333 ETYAFKSNFDSWPSGS 348 (983)
Q Consensus 333 Ep~~FK~~F~~W~~~~ 348 (983)
||..||++|++|+...
T Consensus 367 Ep~~Fk~~F~~Wd~~~ 382 (398)
T 3fg7_A 367 EPPTFTGWFLAWDPFK 382 (398)
T ss_dssp CCHHHHTTSSCCCTTC
T ss_pred CCHHHHHhhhcCChhh
Confidence 9999999999999764
No 9
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=100.00 E-value=4.2e-74 Score=648.34 Aligned_cols=316 Identities=33% Similarity=0.538 Sum_probs=278.0
Q ss_pred hcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHHHHHHHh
Q 002004 13 QGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVL 92 (983)
Q Consensus 13 ~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~~l 92 (983)
.|.| +++||||+++++++||++.||+||+||||||||||.. .++..|+||||+|++||+||+|+||++|++||++|
T Consensus 4 dg~g---~~~vwrIe~~~~~~v~~~~~G~Fy~gD~YIvl~ty~~-~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~l 79 (344)
T 2fh1_A 4 DGTG---QKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRH-GGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEEL 79 (344)
T ss_dssp CSCS---EEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEEE-TTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCC---CEEEEEEcCCeEEECCHHHcCeecCCCeEEEEEEeec-CCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHh
Confidence 3566 5999999999999999999999999999999999975 45689999999999999999999999999999999
Q ss_pred CCCceEEEeeccCCCHHHHhhcCCc-EEEecCc-ccCCCccccccccccEEEEEecce--eEEEEEecCCcCCcCCCCce
Q 002004 93 GGRAVQHRELQGHESDKFLSYFKPC-IIPLEGG-VASGFRKTEEEEFETRLYVCKGKR--VVRMKQVPFARSSLNHDDVF 168 (983)
Q Consensus 93 gg~~vq~Re~QG~Es~~Fls~Fk~~-ii~~~Gg-~~sgf~~~e~~~~~~rLy~vkGk~--~v~~~eV~~s~sSLNs~DvF 168 (983)
||.++||||+||+||++||+||+++ +|+++|| .++++. .+...+|||||+|++ .++++||+++++||||+|||
T Consensus 80 gg~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~gg~~~~~~~---~~~~~~rL~~v~g~~~~~~~~~eV~~~~ssLns~d~F 156 (344)
T 2fh1_A 80 GGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQ---TAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAF 156 (344)
T ss_dssp TSCSEEEEEETTCCCHHHHGGGTTCCEEEESCCCCTTTCS---CCCCSSEEEEEEECTTCCEEEEEECCSGGGCBTTSEE
T ss_pred CCCceEEEeecCCCCHHHHHhhCCCeEEEEcCCcccCCcc---CCCCCceEEEEECCCCCceEEEEecCchhhcCCCceE
Confidence 9999999999999999999999985 6666775 556653 233578999999987 79999999999999999999
Q ss_pred EEeCCCeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCCCCCCCChhhHHHHhCCCCCCCCCCCCccccc
Q 002004 169 ILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDVI 248 (983)
Q Consensus 169 ILd~~~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~~~~~~~~~~~~~ 248 (983)
||+++++||+|+|++||..||.+|+++|+.|+ ++|.+|+||. |+.+||++|||..+++.....++ ..
T Consensus 157 IL~~~~~iyvW~G~~s~~~er~~A~~~a~~l~-------~~i~~v~EG~-----E~~~Fw~~LGg~~~y~~~~~~~~-~~ 223 (344)
T 2fh1_A 157 VLKTPSAAYLWVGTGASEAEKTGAQELLRVLR-------AQPVQVAEGS-----EPDGFWEALGGKAAYRTSPRLKD-KK 223 (344)
T ss_dssp EEECSSCEEEEECTTCCHHHHHHHHHHHHHTT-------CCCEEEETTC-----CCHHHHHHTTSCCCCBCCHHHHC-SC
T ss_pred EEecCCEEEEEECCCCCHHHHHHHHHHHHHhC-------CCcEEEeCCC-----CcHHHHHhcCCCCcccccccccc-cc
Confidence 99999999999999999999999999999983 5788999985 77899999999887765332211 12
Q ss_pred ccCCCCeEEEEe--CCceEEEEcc--ccccccCCCcEEEeeCCCeEEEEEcCCCCHHHHHHHHHHHHHHHHhc--CCCCC
Q 002004 249 AETTPPKLYSIE--DSQVKIVEGE--LSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKS 322 (983)
Q Consensus 249 ~~~~~~rLy~v~--~G~l~~~e~~--l~q~~L~~~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~y~~~~--~rp~~ 322 (983)
.....+|||+|+ +|.+.+.|+. |+|+||++++|||||||++||||+|++++..||+.||..|++|++.. +||.+
T Consensus 224 ~~~~~~rLf~~s~~~G~~~v~ev~~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~~r~~~ 303 (344)
T 2fh1_A 224 MDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRR 303 (344)
T ss_dssp C--CCCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHTC-------
T ss_pred ccccCCEEEEEEcCCCCEEEEEccCCcCHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCccCCCCC
Confidence 234679999998 7999998874 99999999999999999999999999999999999999999999987 79999
Q ss_pred ceEEEecCCCCChhhhhcccCCccCC
Q 002004 323 IRITRVIQGYETYAFKSNFDSWPSGS 348 (983)
Q Consensus 323 t~i~~V~eG~Ep~~FK~~F~~W~~~~ 348 (983)
++|.+|.||.||..||++|++|+...
T Consensus 304 t~i~~V~eG~Ep~~Fk~~F~~W~~~~ 329 (344)
T 2fh1_A 304 TPITVVKQGFEPPSFVGWFLGWDDDY 329 (344)
T ss_dssp CCEEEEETTCCCHHHHTTSSSCCTTC
T ss_pred CcEEEEcCCCCCHHHHHHHhhcChhh
Confidence 99999999999999999999999865
No 10
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=100.00 E-value=4.8e-71 Score=676.82 Aligned_cols=319 Identities=25% Similarity=0.473 Sum_probs=290.6
Q ss_pred CccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 391 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 391 sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
...++||||+++.+++||++.||+||+||||||||||+..+++.+|+||||+|++|++||+++||++|++||+.|+|.||
T Consensus 12 ~~g~~iWrIe~~~~~~v~~~~~G~Fy~gdsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tveLd~~lgg~~v 91 (729)
T 1d0n_A 12 EPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 91 (729)
T ss_dssp SSEEEEEEECSSSEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCeEEEEEcCCEEEeCChHhcCcccCCCEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcce
Confidence 45799999999999999999999999999999999996556778999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCceEEEEeccCcCCCCCCC
Q 002004 471 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSE 549 (983)
Q Consensus 471 q~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~~~~~~~~~~~~~y~~~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d 549 (983)
|+|++||+||+|||+||+ +++|++||++|+|+|+.. +.| ..+|||||+|+ .+++++||++.++||||+|
T Consensus 92 q~Re~Qg~Es~~Fl~~Fk~~i~~~~Gg~~sgf~~v~~------~~~--~~~rL~~vkG~--~~v~~~eV~~s~~SLns~D 161 (729)
T 1d0n_A 92 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVP------NEV--VVQRLLQVKGR--RVVRATEVPVSWESFNNGD 161 (729)
T ss_dssp EEEEETTCCCHHHHHTCSSCEEEESCCTTTTCCCCCC------SSC--CCCEEEEEECS--SSCEEEEECSSGGGCCSSS
T ss_pred EEEEecCCCCHHHHHhccCCcEEeeCCcccCcccccc------cCC--CCcEEEEEECC--CcEEEEEEeccHHHcCCCC
Confidence 999999999999999998 589999999999987531 111 35799999996 4899999999999999999
Q ss_pred eEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-----CceEEecccCCCccccccccCCCcCCCCCCCC-----CCC
Q 002004 550 CFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-----GVAIKHAKEGTESSAFWFPLGGKQSYTSKKVS-----PEI 619 (983)
Q Consensus 550 ~FIL~~~~~iyvW~G~~ss~~er~~A~~va~~l~~-----~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~-----~~~ 619 (983)
||||++++.||+|+|++|+..||.+|+.+|..|+. ..++.+|+||+|+++||.+|||+.+|+..... ...
T Consensus 162 vFILd~g~~iy~W~G~~s~~~Er~kA~~~a~~i~~~er~g~~~i~~v~Eg~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~ 241 (729)
T 1d0n_A 162 CFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKPTLPEATEDTVKEDAAN 241 (729)
T ss_dssp EEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHSGGGCSEEEEEETTCCCHHHHHHHCSCCCCCCCCGGGSCCCCCC
T ss_pred eEEEEcCCEEEEEECCCCCHHHHHHHHHHHHHHhhhhcCCCccEEEecCCCChHHHHHHcCCCcccCCCCcchhhhhhcc
Confidence 99999999999999999999999999999999963 24688999999999999999999888754321 123
Q ss_pred CCCCcEEEEEecCCceeEeeec---ccCccCCCCCCEEEEeCCC-E-EEEEEcCCCCHHHHHHHHHHHHHHHhhhcccCC
Q 002004 620 VRDPHLFTFSFNKGAFQVEEVY---NFSQDDLLTEDILILDTHA-E-VFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEG 694 (983)
Q Consensus 620 ~~~prLF~~s~~~G~~~v~EI~---~F~QdDL~~~dv~ILD~~~-e-IfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~ 694 (983)
...||||+||+.+|.|.++||. +|+|+||+++|||||||+. + ||||+|+.|+..||+.||.+|++|+++. +
T Consensus 242 ~~~~rLy~vs~~~G~l~~~ev~~~~~~~q~~L~~~dv~ILD~g~~~~ifVW~Gk~a~~~er~~A~~~A~~y~~~~----~ 317 (729)
T 1d0n_A 242 RKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISKM----D 317 (729)
T ss_dssp CCCCEEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEECTTSCHHHHTTHHHHHHHHHHHT----T
T ss_pred ccCcEEEEEECCCCCEEEEEeccCCCCCHHHcCCCCEEEEecCCccEEEEEECCCCCHHHHHHHHHHHHHHHhhc----c
Confidence 4679999999999999999997 9999999999999999994 4 9999999999999999999999999985 5
Q ss_pred CCCCCcEEEecCCCCCccccccee-cCCCc
Q 002004 695 LSPKVPLYKVTEGNEPCFCTTFFS-WDPTK 723 (983)
Q Consensus 695 r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k 723 (983)
|+.++||.+|.||.||+.||++|. |++..
T Consensus 318 ~p~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~ 347 (729)
T 1d0n_A 318 YPKQTQVSVLPEGGETPLFRQFFKNWRDPD 347 (729)
T ss_dssp CCTTCEEEEEETTCCCHHHHTTBTTCCCTT
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHhcCCCcc
Confidence 678999999999999999999999 99853
No 11
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-51 Score=449.20 Aligned_cols=247 Identities=28% Similarity=0.380 Sum_probs=127.6
Q ss_pred ccCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHH
Q 002004 6 KSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKT 85 (983)
Q Consensus 6 ~~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~t 85 (983)
+...|+|.++|+++||+|||||||++++||++.||+||+||||||||||..+++.+.|+||||+|++||+||+|+||++|
T Consensus 20 ~~~~~~~~~~g~~~Gl~iWrIe~~~~~~v~~~~~G~Fy~gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~a 99 (297)
T 3tu5_B 20 VVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFT 99 (297)
T ss_dssp CCCCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred cccChhHhccCCCCceEEEEEcCCEEEECCHHHcCeecCCCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHHH
Confidence 44579999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHhCCCceEEEeeccCCCHHHHhhcCCcEEEecCcccCCCccccccccccEEEEEecceeEEEEEecCCcCCcCCC
Q 002004 86 VELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGGVASGFRKTEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHD 165 (983)
Q Consensus 86 veLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rLy~vkGk~~v~~~eV~~s~sSLNs~ 165 (983)
++||++|||.+|||||+||+||++||+||+++|+|++||++|||+||+++.+.+|++++++.+....+++.+++-|+|+|
T Consensus 100 v~Ld~~lgg~~vq~Re~Qg~Es~~Fl~~F~~~i~~~~GG~~sgf~~v~~~~~~~r~~rl~~~e~~~~r~~~ls~vs~~~G 179 (297)
T 3tu5_B 100 VQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASKLRKVAEQTSEGRPKKPSYVEAESERSALLAAIRGHSG 179 (297)
T ss_dssp HHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCCCC-----------------------------
T ss_pred HHHHHHcCCCceEEEEeCCcCCHHHHHHhccCcEEecCCCCCCCceecccCCCCcccceeeeeccccccceeeEEeccCC
Confidence 99999999999999999999999999999999999999999999999988888888888877777778888999999999
Q ss_pred CceEEeCCCeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCCCCCCCChhhHHHHhCCCCCCCCCCCCcc
Q 002004 166 DVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATED 245 (983)
Q Consensus 166 DvFILd~~~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~~~~~~~~~~ 245 (983)
||||+|.+..+++|.+ +.++..++..+.+..+.+++.+..+..+. +....+..++-......+.....
T Consensus 180 d~fi~Dv~~~A~q~le-------~~r~~~~~~~~~d~~~~~~~~v~~~~~~~-----ep~~~~~~~~p~s~~~~~~~~~~ 247 (297)
T 3tu5_B 180 TLSLRKVSSLASEELQ-------SFRNAALGAPGLDKPQQEDLGLPPPPALP-----PPPAPAPQAPSASVTVSRFSTGT 247 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeccccHHHHHHHH-------HHHHhhhcccCcCcccccccCcccCCcCC-----CCCCccccCCCCCCCCCCCCCCc
Confidence 9999999999999964 55666666777777666667777766552 44555555553333322211111
Q ss_pred c-ccccCCCCeEEEEe--CCce
Q 002004 246 D-VIAETTPPKLYSIE--DSQV 264 (983)
Q Consensus 246 ~-~~~~~~~~rLy~v~--~G~l 264 (983)
. ...+.....||.|. .|.+
T Consensus 248 ~~~~~dar~A~L~aIrsgtGa~ 269 (297)
T 3tu5_B 248 PSNSVNARQALMDAIRSGTGAA 269 (297)
T ss_dssp ----------------------
T ss_pred ccCchhhhhhhhHhhhcCCCCe
Confidence 1 11123356799998 5644
No 12
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=100.00 E-value=1.7e-43 Score=348.98 Aligned_cols=132 Identities=48% Similarity=0.866 Sum_probs=122.5
Q ss_pred CCCccccCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhh
Q 002004 1 MSTSAKSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGT 80 (983)
Q Consensus 1 ~~~~~~~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~ 80 (983)
|+++|+.+||+|+++|+++|++||||++++++|||++.||+||+||||||||||...+++.+++||||+|++||+||+|+
T Consensus 19 ~~~~~~~~~~~f~~~g~~~gl~VWrIe~~~~v~vp~~~~G~FysgD~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~ga 98 (150)
T 2ff3_A 19 HGGSMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGA 98 (150)
T ss_dssp -------CCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHH
T ss_pred ccccccccChhhhccCCCCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHH
Confidence 89999999999999999999999999999999999999999999999999999987788899999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCCHHHHhhcCCcEEEecCcccCCCccc
Q 002004 81 AAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGGVASGFRKT 132 (983)
Q Consensus 81 AA~~tveLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~ 132 (983)
||++|++||++|||.|+|+||+||+||++||+||+++|+|++||++|||++|
T Consensus 99 AA~~aveLd~~lgg~~vQ~Re~QG~Ep~~Fl~lFkg~iii~~GG~~Sgf~~v 150 (150)
T 2ff3_A 99 AAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHV 150 (150)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEETTCCCHHHHHTCTTCCEEESCCCCCCCBCC
T ss_pred HHHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhcCCeEEEeCCcCCccccC
Confidence 9999999999999999999999999999999999999999999999999975
No 13
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=100.00 E-value=5e-43 Score=338.76 Aligned_cols=128 Identities=49% Similarity=0.883 Sum_probs=124.9
Q ss_pred CCccccCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhH
Q 002004 2 STSAKSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTA 81 (983)
Q Consensus 2 ~~~~~~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~A 81 (983)
+++|+.+||+|+++|+++|++||||++++++|||++.||+||+||||||||||...+++.+++||||+|++||+||+|+|
T Consensus 1 ~~~~~~~~~~~~~~g~~~gl~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~A 80 (128)
T 3cip_G 1 AGHMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAA 80 (128)
T ss_dssp CTTCCCCCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHH
T ss_pred CccccccchhHHhcCCCCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHH
Confidence 57899999999999999999999999999999999999999999999999999877888999999999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEEeeccCCCHHHHhhcCCcEEEecCcccCCC
Q 002004 82 AIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGGVASGF 129 (983)
Q Consensus 82 A~~tveLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf 129 (983)
|++|++||++|||.|+|+||+||+||++||+||+++|+|++||++|||
T Consensus 81 a~~aveLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf 128 (128)
T 3cip_G 81 AIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 128 (128)
T ss_dssp HHHHHHHHHHTTTCEEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhCCCeEEEECCcCCCC
Confidence 999999999999999999999999999999999999999999999987
No 14
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=100.00 E-value=1.7e-42 Score=342.36 Aligned_cols=133 Identities=49% Similarity=0.883 Sum_probs=127.3
Q ss_pred cCChhhhcCCccccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHH
Q 002004 7 SLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTV 86 (983)
Q Consensus 7 ~~d~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tv 86 (983)
.+|++|+++|+++|++||||+++++++||++.||+||+||||||||||...+++.+++||||+|++||+|++|+||++|+
T Consensus 3 ~~~~~f~~~g~~~gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~av 82 (147)
T 1t44_G 3 HEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTV 82 (147)
T ss_dssp -CCHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ccchhhhccCCCCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999999987788899999999999999999999999999
Q ss_pred HHHHHhCCCceEEEeeccCCCHHHHhhcCCcEEEecCcccCCCcccccccccc
Q 002004 87 ELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGGVASGFRKTEEEEFET 139 (983)
Q Consensus 87 eLd~~lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~ 139 (983)
+||++|||.|+|+||+||+||++||+||+++|+|++||++|+|+|++++.+.+
T Consensus 83 eLd~~lgg~~vq~R~~QG~Ep~~Fl~~F~~~iii~~Gg~~s~~k~~et~~~~~ 135 (147)
T 1t44_G 83 QLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVETQEKNP 135 (147)
T ss_dssp HHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCCEECCC
T ss_pred HHHHHcCCCceEEEEECCCCCHHHHHHhCCCeEEEeCCcccccceeccccccC
Confidence 99999999999999999999999999999999999999999999999766544
No 15
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=366.75 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=109.8
Q ss_pred cEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEE
Q 002004 393 KMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 472 (983)
Q Consensus 393 ~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~ 472 (983)
.|+||||+++.+++||++.||+||+||||||||||+..+++..|.||||+|++|++||+++||++|++||+.|+|.|||+
T Consensus 34 Gl~iWrIe~~~~~~v~~~~~G~Fy~gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~ 113 (297)
T 3tu5_B 34 GLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQH 113 (297)
T ss_dssp EEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred ceEEEEEcCCEEEECCHHHcCeecCCCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEE
Confidence 49999999999999999999999999999999999766788999999999999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCceEEEEeccCcCCCCCCCeE
Q 002004 473 RIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECF 551 (983)
Q Consensus 473 Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~~~~~~~~~~~~~y~~~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d~F 551 (983)
|++||+||++||+||+ +|+|++||++|||+|+. ++.|.....+|+.+++....+ +...+.++|+++||
T Consensus 114 Re~Qg~Es~~Fl~~F~~~i~~~~GG~~sgf~~v~------~~~~~~r~~rl~~~e~~~~r~-----~~ls~vs~~~Gd~f 182 (297)
T 3tu5_B 114 REVQGFESATFLGYFKSGLKYKKGGVASKLRKVA------EQTSEGRPKKPSYVEAESERS-----ALLAAIRGHSGTLS 182 (297)
T ss_dssp EEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCC------CCC-------------------------------------
T ss_pred EEeCCcCCHHHHHHhccCcEEecCCCCCCCceec------ccCCCCcccceeeeecccccc-----ceeeEEeccCCcee
Confidence 9999999999999999 59999999999999864 333443334566666654433 44556799999999
Q ss_pred EeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-CceEEecccCCCccccccccCCCcCCCCCCC---CCC--CCCCCcE
Q 002004 552 LLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-GVAIKHAKEGTESSAFWFPLGGKQSYTSKKV---SPE--IVRDPHL 625 (983)
Q Consensus 552 IL~~~~~iyvW~G~~ss~~er~~A~~va~~l~~-~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~---~~~--~~~~prL 625 (983)
|++.+..+|.|.++... .+++..+.+.... ...+..+..+.+++..+..+|-+...+.... ..+ ..+.+.|
T Consensus 183 i~Dv~~~A~q~le~~r~---~~~~~~~~d~~~~~~~~v~~~~~~~ep~~~~~~~~p~s~~~~~~~~~~~~~~~dar~A~L 259 (297)
T 3tu5_B 183 LRKVSSLASEELQSFRN---AALGAPGLDKPQQEDLGLPPPPALPPPPAPAPQAPSASVTVSRFSTGTPSNSVNARQALM 259 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccHHHHHHHHHHHH---hhhcccCcCcccccccCcccCCcCCCCCCccccCCCCCCCCCCCCCCcccCchhhhhhhh
Confidence 99999999999875432 2223333222221 2345566788889999988876554432211 111 2356779
Q ss_pred EEEEecCCceeEeee-----ccc-CccCCCCCC
Q 002004 626 FTFSFNKGAFQVEEV-----YNF-SQDDLLTED 652 (983)
Q Consensus 626 F~~s~~~G~~~v~EI-----~~F-~QdDL~~~d 652 (983)
|.+++.+|.+.+..| .+| +|+-+..++
T Consensus 260 ~aIrsgtGa~rLkKv~~~~~~P~p~~~~~~~~~ 292 (297)
T 3tu5_B 260 DAIRSGTGAARLRKTETQEKNPLPSKETIEQEK 292 (297)
T ss_dssp ---------------------------------
T ss_pred HhhhcCCCCeeccccccccCCCCCchhhhhHHh
Confidence 999999998766544 578 454444444
No 16
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=100.00 E-value=2.7e-38 Score=304.86 Aligned_cols=112 Identities=54% Similarity=1.009 Sum_probs=107.8
Q ss_pred cccEEEEEEECceeeeCCCCCcCeeeeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHHHHHHHhCCCce
Q 002004 18 RVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAV 97 (983)
Q Consensus 18 ~~gl~IWrIe~~~~v~vp~~~~G~Fysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~v 97 (983)
+++++||||++++++|||++.||+||+|||||||||+. .+++.+++||||+|++||+||+|+||++|++||++|||.||
T Consensus 15 ~~~l~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~t~~-~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 93 (126)
T 2vik_A 15 TPGIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTRK-TGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGSVAV 93 (126)
T ss_dssp CCEEEEEECGGGSCCEECTTTTTCCCSSSCEEEEEEEE-CSSSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred CCCEEEEEEeCCEEEECChhhcCeeCCCCeEEEEEecc-CCCceeEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCcc
Confidence 47899999999999999999999999999999999985 46788999999999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhhcCCcEEEecCcccCCCc
Q 002004 98 QHRELQGHESDKFLSYFKPCIIPLEGGVASGFR 130 (983)
Q Consensus 98 q~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~ 130 (983)
|+||+||+||++||+||+++|+|++||++|||+
T Consensus 94 q~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf~ 126 (126)
T 2vik_A 94 QHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126 (126)
T ss_dssp EEEEETTTSHHHHHHHCSSCCCCCCSCTTCSCC
T ss_pred EEEEECCCCCHHHHHHcCCCeEEEECcccCCCC
Confidence 999999999999999999999999999999985
No 17
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=100.00 E-value=1.5e-37 Score=299.67 Aligned_cols=120 Identities=31% Similarity=0.557 Sum_probs=115.1
Q ss_pred CCCCCcccCCccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHH
Q 002004 382 EEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTM 461 (983)
Q Consensus 382 ~e~~~~~d~sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL 461 (983)
+..+|+||++++++||||+++.+++||++.||+||+|||||||||| ..+++.+|+||||+|++|++||+++||++|++|
T Consensus 6 ~~~~~~d~~~~~l~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~t~-~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveL 84 (126)
T 2vik_A 6 KVTGKLDKTTPGIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTR-KTGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQM 84 (126)
T ss_dssp SSTTSSCSSCCEEEEEECGGGSCCEECTTTTTCCCSSSCEEEEEEE-ECSSSEEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred hhcCCcCcCCCCEEEEEEeCCEEEECChhhcCeeCCCCeEEEEEec-cCCCceeEEEEEEeCCCCCchhHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999999 578899999999999999999999999999999
Q ss_pred HHHcCCCCeEEEeecCCCCHHHHhhcC-CeEEEeCccccCCc
Q 002004 462 CNSLKGRPVQGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYK 502 (983)
Q Consensus 462 ~~~l~g~~vq~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~ 502 (983)
|+.|+|.|||+|++||+||+|||+||+ +|+|++||++|+|+
T Consensus 85 d~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf~ 126 (126)
T 2vik_A 85 DEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126 (126)
T ss_dssp HHHTTSCSCEEEEETTTSHHHHHHHCSSCCCCCCSCTTCSCC
T ss_pred HHHcCCCccEEEEECCCCCHHHHHHcCCCeEEEECcccCCCC
Confidence 999999999999999999999999999 69999999999984
No 18
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=100.00 E-value=2.1e-35 Score=285.45 Aligned_cols=111 Identities=28% Similarity=0.577 Sum_probs=106.3
Q ss_pred CccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 391 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 391 sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
+.+++||||+++.+++||++.||+||+||||||||||...+++.+|+||||+|++|++||+++||++|++||+.|+|.|+
T Consensus 17 ~~gl~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 96 (128)
T 3cip_G 17 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 96 (128)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHHHHHHHHHHHHcCCCce
Confidence 55799999999999999999999999999999999997667789999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCC
Q 002004 471 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGY 501 (983)
Q Consensus 471 q~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~ 501 (983)
|+||+||+||+|||+||+ +|+|++||++|+|
T Consensus 97 q~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf 128 (128)
T 3cip_G 97 QHREVQGFESATFLGYFKSGLKYKKGGVASGF 128 (128)
T ss_dssp EEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred EEEeECCCCCHHHHHHhCCCeEEEECCcCCCC
Confidence 999999999999999999 5999999999876
No 19
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=100.00 E-value=4.2e-35 Score=289.64 Aligned_cols=116 Identities=28% Similarity=0.554 Sum_probs=110.4
Q ss_pred CccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 391 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 391 sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
+..++||||+++.+++||++.||+||+||||||||||...+++.+|+||||+|++|++||+++||++|++||+.|+|.|+
T Consensus 14 ~~gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 93 (147)
T 1t44_G 14 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 93 (147)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCce
Confidence 45799999999999999999999999999999999997667889999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccc
Q 002004 471 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLA 506 (983)
Q Consensus 471 q~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~~~~~ 506 (983)
|+|++||+||+|||+||+ +|+|++||++|+|+|+.+
T Consensus 94 q~R~~QG~Ep~~Fl~~F~~~iii~~Gg~~s~~k~~et 130 (147)
T 1t44_G 94 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVET 130 (147)
T ss_dssp EEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCC
T ss_pred EEEEECCCCCHHHHHHhCCCeEEEeCCcccccceecc
Confidence 999999999999999999 699999999999998743
No 20
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=100.00 E-value=4.7e-35 Score=288.91 Aligned_cols=113 Identities=28% Similarity=0.578 Sum_probs=108.4
Q ss_pred CccEEEEEEeCCccccCCCCccceeeeCcEEEEEEeeecCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 391 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 391 sG~l~VWRIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
+..++||||+++++++||++.+|+||+||||||||||...+++.+++||||+|++|++||+++||++|++||+.|+|.|+
T Consensus 36 ~~gl~VWrIe~~~~v~vp~~~~G~FysgD~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~gaAA~~aveLd~~lgg~~v 115 (150)
T 2ff3_A 36 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 115 (150)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCce
Confidence 55799999999999999999999999999999999997667789999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCcc
Q 002004 471 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKK 503 (983)
Q Consensus 471 q~Rv~qGkEp~~Fl~iF~-~~iI~~GG~~s~~~~ 503 (983)
|+||+||+||++||+||+ +++|++||++|+|++
T Consensus 116 Q~Re~QG~Ep~~Fl~lFkg~iii~~GG~~Sgf~~ 149 (150)
T 2ff3_A 116 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 149 (150)
T ss_dssp EEEEETTCCCHHHHHTCTTCCEEESCCCCCCCBC
T ss_pred EEEeECCCCCHHHHHHhcCCeEEEeCCcCCcccc
Confidence 999999999999999999 699999999999985
No 21
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.93 E-value=1.3e-26 Score=220.79 Aligned_cols=109 Identities=37% Similarity=0.597 Sum_probs=88.5
Q ss_pred CCCccccccccccEEEEEecceeEEEEEecCCcCCcCCCCceEEeCCCeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCC
Q 002004 127 SGFRKTEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDG 206 (983)
Q Consensus 127 sgf~~~e~~~~~~rLy~vkGk~~v~~~eV~~s~sSLNs~DvFILd~~~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G 206 (983)
|||+||+++.+.+|||||||+++++++||+++++|||++||||||+++.||+|+|++||..||.+|+++|+.| +.++.|
T Consensus 1 SGf~~v~~~~~~~rL~~v~G~~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~a~~i-~~er~g 79 (114)
T 1svq_A 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAI-DAERKG 79 (114)
T ss_dssp ---------CCCEEEEEEECTTSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHHHHHHHHHHHHH-HHHHTT
T ss_pred CCCccccCCCCCcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHHHHHHHHHHHHh-hhccCC
Confidence 6899999888899999999999999999999999999999999999999999999999999999999999999 566788
Q ss_pred CccEEEEeCCCCCCCCChhhHHHHhCCCCCCCC
Q 002004 207 NCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGK 239 (983)
Q Consensus 207 ~~~I~~VdeG~~~~~~E~~eFw~~LGg~~~~~~ 239 (983)
+++|.+|+||.. .|+.+||.+|||..++..
T Consensus 80 ~~~i~vv~eg~~---~E~~~Fw~~LGg~~~~~~ 109 (114)
T 1svq_A 80 LPKVEVFCETDS---DIPAEFWKLLGGKGAIAA 109 (114)
T ss_dssp CSEEEECCCCTT---CCCHHHHHHHTC------
T ss_pred CccEEEEeCCCc---CCcHHHHHHcCCCCCCcc
Confidence 999999999841 378899999999877654
No 22
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.91 E-value=1.2e-24 Score=203.76 Aligned_cols=98 Identities=33% Similarity=0.529 Sum_probs=92.6
Q ss_pred ccEEEEEecceeEEEEEecCCcCCcCCCCceEEeCCCeEEEEcCCCCCHHHHHHHHHHHHHHhhccCCCCccEEEEeCCC
Q 002004 138 ETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGK 217 (983)
Q Consensus 138 ~~rLy~vkGk~~v~~~eV~~s~sSLNs~DvFILd~~~~Iy~W~G~~Sn~~ER~kA~~la~~Ik~~~~~G~~~I~~VdeG~ 217 (983)
.+|||||||+++++++||+++++|||++||||||+++.||+|+|++||..||.+|+++|+.|++.+|+|+++|.+|+||.
T Consensus 2 ~~rL~~v~g~~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG~ 81 (104)
T 1kcq_A 2 VQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGT 81 (104)
T ss_dssp CCEEEEEEESSSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETTC
T ss_pred CcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999988888999999999995
Q ss_pred CCCCCChhhHHHHhCCCCCCCCC
Q 002004 218 LDTESDSGEFWVLFGGFAPIGKK 240 (983)
Q Consensus 218 ~~~~~E~~eFw~~LGg~~~~~~~ 240 (983)
|+.+||.+|||..+|+..
T Consensus 82 -----E~~~Fw~~LGg~~~~~~~ 99 (104)
T 1kcq_A 82 -----EPEAMLQVLGPKPALPAG 99 (104)
T ss_dssp -----CCHHHHHHHCSCCCCCCC
T ss_pred -----CCHHHHHHcCCCCCCCCC
Confidence 778999999999877654
No 23
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=99.91 E-value=5.6e-25 Score=186.02 Aligned_cols=65 Identities=43% Similarity=0.675 Sum_probs=60.2
Q ss_pred CCCcccChHHHh-hccCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002004 919 TSRSTFSYDQLK-ARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 983 (983)
Q Consensus 919 ~~~~~~~~~~l~-~~~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 983 (983)
++..+|||++|+ ..+.+||+|||++++|.||||+||++||||+|+||++||+|||++|||++|||
T Consensus 2 ~~~~~yp~~~L~~~~~~~lP~gVD~~~lE~yLsdedF~~vFgms~~eF~~LP~WKq~~lKk~~~LF 67 (67)
T 1yu8_X 2 TKLETFPLDVLVNTAAEDLPRGVDPSAKENHLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGLF 67 (67)
T ss_dssp --CCCCCHHHHHSSCGGGSCTTCCTTCGGGGSCHHHHHHHHSSCHHHHHTSCHHHHHHHHHHTTCC
T ss_pred CCccccCHHHHHHhccCCCCcccChHHHHhcCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHhcCC
Confidence 456799999999 55668999999999999999999999999999999999999999999999999
No 24
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=99.91 E-value=3.2e-25 Score=188.95 Aligned_cols=64 Identities=38% Similarity=0.550 Sum_probs=60.3
Q ss_pred CCcccChHHHhhc---cCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002004 920 SRSTFSYDQLKAR---SDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 983 (983)
Q Consensus 920 ~~~~~~~~~l~~~---~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 983 (983)
+.++|||++|+.+ +.+||+|||+++||.||||+||++||||||+||++||+|||++|||++|||
T Consensus 2 ~~~~ypy~~L~~~~~~~~~lP~gVD~~~lE~yLsdedF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 68 (68)
T 1qzp_A 2 GLQIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 68 (68)
T ss_dssp CCCCBCSTTTCCCSCTTCCCCSSCCGGGCGGGBCHHHHHHHSSSCHHHHHHSCHHHHHHHHHHHTCC
T ss_pred CCccccHHHHHHhcccccCCCCCCCchHHHhhCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHhcCC
Confidence 3578999999953 578999999999999999999999999999999999999999999999999
No 25
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=99.90 E-value=8e-25 Score=185.53 Aligned_cols=63 Identities=32% Similarity=0.546 Sum_probs=59.3
Q ss_pred CCCcccChHHHhhccCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002004 919 TSRSTFSYDQLKARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 983 (983)
Q Consensus 919 ~~~~~~~~~~l~~~~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 983 (983)
-+.++|||++|+. .++|+||||++||.||||+||++||||||+||++||+|||++|||++|||
T Consensus 5 l~~~~yp~~~L~~--~~lP~gVD~~~lE~yLsdedF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 67 (67)
T 2k6m_S 5 LCKTIYPLADLLA--RPLPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF 67 (67)
T ss_dssp CCCCCCCHHHHTT--SCCCSSSBTTBCGGGSCHHHHHHHTSSCHHHHTTSCHHHHHHHHHHHTCC
T ss_pred HcCCccCHHHHhc--CCCCCCCCchHHHhhCCHHHHHHHHCcCHHHHHHCcHHHHHHHHHHhCCC
Confidence 3457899999995 37999999999999999999999999999999999999999999999999
No 26
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=99.89 E-value=2e-24 Score=191.70 Aligned_cols=63 Identities=35% Similarity=0.538 Sum_probs=59.8
Q ss_pred CcccChHHHhhc---cCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002004 921 RSTFSYDQLKAR---SDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 983 (983)
Q Consensus 921 ~~~~~~~~l~~~---~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 983 (983)
+++|||++|+.+ +.+||+||||++||.||||+||++||||+|+||++||+|||++|||+++||
T Consensus 17 ~~~Ypye~L~~~~~~~~~lP~gVD~tklE~YLSdedF~~vFgMsr~eF~~LP~WKq~~lKK~~gLF 82 (88)
T 1ujs_A 17 YKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLF 82 (88)
T ss_dssp CCCCCTTTTCCCTTTTCCCCSSCCTTTGGGGSCTTHHHHHHSSCHHHHTTSCHHHHHHHHHHTTCC
T ss_pred cccccHHHHHHhcccccCCCcccCHHHHHhcCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHcCCc
Confidence 589999999953 368999999999999999999999999999999999999999999999999
No 27
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.86 E-value=5e-22 Score=186.04 Aligned_cols=92 Identities=24% Similarity=0.425 Sum_probs=85.5
Q ss_pred eeEEEEEecCCCceEEEEeccCcCCCCCCCeEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhC-----CCceEEecccC
Q 002004 520 IALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLK-----PGVAIKHAKEG 594 (983)
Q Consensus 520 ~~Lf~V~G~~~~~~~aveV~~~assLnS~d~FIL~~~~~iyvW~G~~ss~~er~~A~~va~~l~-----~~~~~~~v~EG 594 (983)
+|||||+|. .+++++||++.++||||+|||||++++.||+|+|++|+..||.+|..+|+.|+ ...++.+|.||
T Consensus 3 ~rL~~v~g~--~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG 80 (104)
T 1kcq_A 3 QRLFQVKGR--RVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEG 80 (104)
T ss_dssp CEEEEEEES--SSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETT
T ss_pred cEEEEEECC--CcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCC
Confidence 599999996 69999999999999999999999999999999999999999999999999986 23578999999
Q ss_pred CCccccccccCCCcCCCCC
Q 002004 595 TESSAFWFPLGGKQSYTSK 613 (983)
Q Consensus 595 ~E~~~FW~~LGgk~~y~~~ 613 (983)
.||++||.+|||+.+|+..
T Consensus 81 ~E~~~Fw~~LGg~~~~~~~ 99 (104)
T 1kcq_A 81 TEPEAMLQVLGPKPALPAG 99 (104)
T ss_dssp CCCHHHHHHHCSCCCCCCC
T ss_pred CCCHHHHHHcCCCCCCCCC
Confidence 9999999999999988753
No 28
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.86 E-value=3e-22 Score=190.62 Aligned_cols=94 Identities=33% Similarity=0.539 Sum_probs=80.8
Q ss_pred CceeEEEEEecCCCceEEEEeccCcCCCCCCCeEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCC----ceEEeccc
Q 002004 518 DSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPG----VAIKHAKE 593 (983)
Q Consensus 518 ~~~~Lf~V~G~~~~~~~aveV~~~assLnS~d~FIL~~~~~iyvW~G~~ss~~er~~A~~va~~l~~~----~~~~~v~E 593 (983)
..+|||||+|+ .+++++||++.++||||+|||||++++.||+|+|++|+..||.+|..+|+.|... .++.+++|
T Consensus 11 ~~~rL~~v~G~--~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~a~~i~~er~g~~~i~vv~e 88 (114)
T 1svq_A 11 YKPRLLHISGD--KNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAIDAERKGLPKVEVFCE 88 (114)
T ss_dssp CCEEEEEEECT--TSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCcEEEEEECC--CcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHHHHHHHHHHHHhhhccCCCccEEEEeC
Confidence 35799999997 7899999999999999999999999999999999999999999999999998432 46889999
Q ss_pred CC--CccccccccCCCcCCCCC
Q 002004 594 GT--ESSAFWFPLGGKQSYTSK 613 (983)
Q Consensus 594 G~--E~~~FW~~LGgk~~y~~~ 613 (983)
|+ ||++||.+|||+.+|...
T Consensus 89 g~~~E~~~Fw~~LGg~~~~~~~ 110 (114)
T 1svq_A 89 TDSDIPAEFWKLLGGKGAIAAK 110 (114)
T ss_dssp CTTCCCHHHHHHHTC-------
T ss_pred CCcCCcHHHHHHcCCCCCCccc
Confidence 99 999999999999888653
No 29
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=99.69 E-value=5.8e-18 Score=126.49 Aligned_cols=37 Identities=46% Similarity=0.833 Sum_probs=35.8
Q ss_pred cCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002004 947 AYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 983 (983)
Q Consensus 947 ~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 983 (983)
.||||+||++||||+|+||++||+|||++|||++|||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 37 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 37 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHHHHSCHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHhcCC
Confidence 5999999999999999999999999999999999998
No 30
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=99.64 E-value=6.1e-17 Score=119.37 Aligned_cols=35 Identities=54% Similarity=0.910 Sum_probs=34.6
Q ss_pred CCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002004 949 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 983 (983)
Q Consensus 949 Ls~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 983 (983)
|||+||++||||+|+||++||+|||++|||++|||
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 35 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLPLWLQQHLKKEKGLF 35 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHCCCHHHHHHCcHHHHHHHHHHhCCC
Confidence 89999999999999999999999999999999999
No 31
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=94.81 E-value=0.091 Score=64.83 Aligned_cols=111 Identities=19% Similarity=0.227 Sum_probs=69.3
Q ss_pred CCCcEEEEEecC-CceeEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHH----------------------
Q 002004 621 RDPHLFTFSFNK-GAFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQS---------------------- 677 (983)
Q Consensus 621 ~~prLF~~s~~~-G~~~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~~ek~~---------------------- 677 (983)
..|+||.+.+-. ......+-.+.+-+-|.++.|||||++..||||+|+.+++.-.+.
T Consensus 619 iyP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~~l~dlFgv~~~~~i~~~~~~lp~~~~ 698 (766)
T 3eh2_A 619 FYPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDN 698 (766)
T ss_dssp HSCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSCSSGGGSCTTCCSCCCCSS
T ss_pred HhheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHHHHHHHcCCCchhhcCcccccCCCCCC
Confidence 579999885321 111222334677788999999999999999999999997653221
Q ss_pred ----HHHHHHHHHhhhcccCCCCCCCcEEEecCCCCCcc--cccceecCCCcccccCchHHHHHHHHh
Q 002004 678 ----AFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCF--CTTFFSWDPTKATVQGNSFQKKVALLF 739 (983)
Q Consensus 678 ----Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~~~~~~~ 739 (983)
-+.--.++++. .|+...|+++|++| .|.. |..++ =++. ....+.||.+.|..|.
T Consensus 699 ~~s~~vr~ii~~lr~-----~~~~~~~l~ivr~~-~~~~~~f~~~L-vED~-~~~~~~SY~dfL~~lh 758 (766)
T 3eh2_A 699 PLSKKVRGLIDSLRA-----QRSRYMKLTVVKQE-DKMEMLFKHFL-VEDK-SLSGGASYVDFLCHMH 758 (766)
T ss_dssp HHHHHHHHHHHHHHT-----TSSSCCEEEEEESS-SSTHHHHHTTC-TTSC-CTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----hCCCCceEEEEeCC-CChHHHHHHhC-cccC-CCCCCCCHHHHHHHHH
Confidence 12222333433 34567899999998 5543 33322 2222 2211579999887765
No 32
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=94.68 E-value=0.065 Score=66.52 Aligned_cols=54 Identities=15% Similarity=0.323 Sum_probs=40.7
Q ss_pred CCCcEEEEEec---------------CCceeEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHH
Q 002004 621 RDPHLFTFSFN---------------KGAFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKE 674 (983)
Q Consensus 621 ~~prLF~~s~~---------------~G~~~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~~e 674 (983)
..|+||.+.+. +|.+.+-+-.+.+-+-|+++.+||||+|..||+|+|+.+++.-
T Consensus 636 iyP~L~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lwvg~~~~~~l 704 (810)
T 1pcx_A 636 IYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPAL 704 (810)
T ss_dssp HSCEEEECTTCCSSTTSBC--------CCBCCCCBCCSSTTSCCTTCEEEEECSSEEEEEECTTCCHHH
T ss_pred ccCEEEEeccCcccccccccccccccccccccCCcccCCHHHhCcCCEEEEECCCEEEEEeCCCCCHHH
Confidence 46899987542 1223333345778888999999999999999999999988654
No 33
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=94.39 E-value=0.054 Score=66.62 Aligned_cols=110 Identities=16% Similarity=0.227 Sum_probs=66.1
Q ss_pred CCCcEEEEEec--CCceeE-------eeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHH--------------
Q 002004 621 RDPHLFTFSFN--KGAFQV-------EEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQS-------------- 677 (983)
Q Consensus 621 ~~prLF~~s~~--~G~~~v-------~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~~ek~~-------------- 677 (983)
..|+||.+++- .|.+.+ ....+.+-+-|.++.|||||++..||||+|+.+++.--+.
T Consensus 600 iyP~L~~~h~l~~~~~~~~~~~~~~~P~~l~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~ll~dlFGv~~~~~~~~~~ 679 (751)
T 3eh1_A 600 IHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKM 679 (751)
T ss_dssp HSCEEEECTTCCSTTCEEETTEEECCCCCBCSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHTTCCSSGGGCCSSB
T ss_pred ccceEEEeecCccccCcccCCCccCCCCcccCCHHHcccCCEEEEECCCEEEEEECCCCCHHHHHHHcCCCchhhcCccc
Confidence 56899988631 122221 1223567788999999999999999999999988643321
Q ss_pred ------------HHHHHHHHHhhhcccCCCCCCCcEEEecCCCCCcc--cccceecCCCcccccCchHHHHHHHHh
Q 002004 678 ------------AFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCF--CTTFFSWDPTKATVQGNSFQKKVALLF 739 (983)
Q Consensus 678 ------------Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~~~~~~~ 739 (983)
-+.--.++++. .|+....+++|++| .|.. |.+++.=|. .. .+.||.+.|..|.
T Consensus 680 ~~lp~~~t~~s~~vr~ii~~lr~-----~r~~~~~l~vvr~~-~~~~~~f~~~LvED~--~~-~~~SY~~fL~~~h 746 (751)
T 3eh1_A 680 THLPELDTLSSERARSFITWLRD-----SRPLSPILHIVKDE-SPAKAEFFQHLIEDR--TE-AAFSYYEFLLHVQ 746 (751)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHH-----TSSSCCEEEEEESS-SSSHHHHHTTCTTSC--BT-TBCCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHh-----cCCCcceEEEEeCC-CchHHHHHHhCcccC--CC-CCCCHHHHHHHHH
Confidence 11112234443 23333346778877 5543 333222222 23 4789999877664
No 34
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=94.03 E-value=0.13 Score=63.43 Aligned_cols=111 Identities=19% Similarity=0.219 Sum_probs=69.3
Q ss_pred CCCcEEEEEecCCce-eEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHH--------------------
Q 002004 621 RDPHLFTFSFNKGAF-QVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAF-------------------- 679 (983)
Q Consensus 621 ~~prLF~~s~~~G~~-~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~~ek~~Al-------------------- 679 (983)
..|+||.+.+-.... ...+-.+.+-+-|.++.|||||++..||||+|+.+++.-.+..+
T Consensus 623 iyP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l~~~lfgv~~~~~i~~~~~~lp~~~~ 702 (770)
T 3efo_B 623 FYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGN 702 (770)
T ss_dssp HSCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSSSSGGGCCTTCCSCCCCCS
T ss_pred hccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHHHHHhcCCCchhhcCcccccCCCCCC
Confidence 579999875322111 12233467788899999999999999999999999875433222
Q ss_pred ------HHHHHHHhhhcccCCCCCCCcEEEecCCCCCcc--cccceecCCCcccccCchHHHHHHHHh
Q 002004 680 ------EFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCF--CTTFFSWDPTKATVQGNSFQKKVALLF 739 (983)
Q Consensus 680 ------~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~~~~~~~ 739 (983)
.--.++|+. .|+...||++|+|| .|.. |..++ =++ +....+.||-+.|..|.
T Consensus 703 ~~s~~vr~ii~~lr~-----~r~~~~~l~ivr~~-~~~e~~f~~~L-vED-~~~~~~~SY~dfL~~lh 762 (770)
T 3efo_B 703 PYSQQLRMIMGIIQQ-----KRPYSMKLTIVKQR-EQPEMVFRQFL-VED-KGLYGGSSYVDFLCCVH 762 (770)
T ss_dssp SHHHHHHHHHHHHHT-----TCSSCCEEEEEEST-TSTTHHHHTTC-TTS-CC---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----hCCCCccEEEEeCC-CChHHHHHHhC-ccc-CCCCCCCCHHHHHHHHH
Confidence 112233333 35567899999998 4533 32222 222 22123679999887765
No 35
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=93.57 E-value=0.19 Score=62.00 Aligned_cols=80 Identities=24% Similarity=0.400 Sum_probs=53.6
Q ss_pred CCeEEEEeC----CceEEEEccccccccCCCcEEEeeCCCeEEEEEcCCCCHHHHH------------------------
Q 002004 253 PPKLYSIED----SQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERK------------------------ 304 (983)
Q Consensus 253 ~~rLy~v~~----G~l~~~e~~l~q~~L~~~~vyILD~g~eIyVWiGk~as~~eRk------------------------ 304 (983)
-|+||.+.+ ....+.-+.++-+-|.++.+||||+|..||||+|+.++++--+
T Consensus 620 yP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~~l~dlFgv~~~~~i~~~~~~lp~~~~~ 699 (766)
T 3eh2_A 620 YPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNP 699 (766)
T ss_dssp SCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSCSSGGGSCTTCCSCCCCSSH
T ss_pred hheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHHHHHHHcCCCchhhcCcccccCCCCCCH
Confidence 588998852 1112222337888899999999999999999999998765221
Q ss_pred --HHHHHHHHHHHhcCCCCCceEEEecCCCCC
Q 002004 305 --AASQAAEEFISSQNRPKSIRITRVIQGYET 334 (983)
Q Consensus 305 --~A~~~A~~y~~~~~rp~~t~i~~V~eG~Ep 334 (983)
.-+....+.++. .|+...++.+|.+| .+
T Consensus 700 ~s~~vr~ii~~lr~-~~~~~~~l~ivr~~-~~ 729 (766)
T 3eh2_A 700 LSKKVRGLIDSLRA-QRSRYMKLTVVKQE-DK 729 (766)
T ss_dssp HHHHHHHHHHHHHT-TSSSCCEEEEEESS-SS
T ss_pred HHHHHHHHHHHHHH-hCCCCceEEEEeCC-CC
Confidence 222223333443 45677889999887 44
No 36
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=93.37 E-value=0.1 Score=65.43 Aligned_cols=52 Identities=15% Similarity=0.356 Sum_probs=39.3
Q ss_pred CCCcEEEEEec---------------CCceeEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCH
Q 002004 621 RDPHLFTFSFN---------------KGAFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDS 672 (983)
Q Consensus 621 ~~prLF~~s~~---------------~G~~~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~~ 672 (983)
..|+||.+++. +|.+.+-+-.+.+-+-|+++.+||||+|..||+|+|+.+++
T Consensus 752 iyP~L~s~h~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lWvG~~~~p 818 (926)
T 1m2v_B 752 IYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVP 818 (926)
T ss_dssp HSCEEEETTTCCSSCSCC---------CCCCCCCCBCSCSTTCCTTCEEEEECSSEEEEEECTTCCS
T ss_pred ccCeEEEeccCcccccccccccccccccccccCCcccCcHHHhccCCEEEEECCCEEEEEecCCCCH
Confidence 46999987542 12222333456778889999999999999999999999874
No 37
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=92.08 E-value=0.35 Score=59.66 Aligned_cols=78 Identities=27% Similarity=0.385 Sum_probs=52.7
Q ss_pred CCeEEEEeC----CceEEEEccccccccCCCcEEEeeCCCeEEEEEcCCCCHHHHHH-----------------------
Q 002004 253 PPKLYSIED----SQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKA----------------------- 305 (983)
Q Consensus 253 ~~rLy~v~~----G~l~~~e~~l~q~~L~~~~vyILD~g~eIyVWiGk~as~~eRk~----------------------- 305 (983)
-|+||.+.+ ....+.-+.++.+-|.++.+||||+|..||||+|+.+.+.--..
T Consensus 624 yP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l~~~lfgv~~~~~i~~~~~~lp~~~~~ 703 (770)
T 3efo_B 624 YPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNP 703 (770)
T ss_dssp SCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSSSSGGGCCTTCCSCCCCCSS
T ss_pred ccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHHHHHhcCCCchhhcCcccccCCCCCCH
Confidence 578998841 11112223378888999999999999999999999987654321
Q ss_pred ---HHHHHHHHHHhcCCCCCceEEEecCC
Q 002004 306 ---ASQAAEEFISSQNRPKSIRITRVIQG 331 (983)
Q Consensus 306 ---A~~~A~~y~~~~~rp~~t~i~~V~eG 331 (983)
-++.-.+.++. .|+...++.+|.+|
T Consensus 704 ~s~~vr~ii~~lr~-~r~~~~~l~ivr~~ 731 (770)
T 3efo_B 704 YSQQLRMIMGIIQQ-KRPYSMKLTIVKQR 731 (770)
T ss_dssp HHHHHHHHHHHHHT-TCSSCCEEEEEEST
T ss_pred HHHHHHHHHHHHHH-hCCCCccEEEEeCC
Confidence 11222233333 45777889999988
No 38
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=89.33 E-value=0.46 Score=58.66 Aligned_cols=46 Identities=26% Similarity=0.650 Sum_probs=36.6
Q ss_pred CCCcEEEEEecCCceeEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCC
Q 002004 621 RDPHLFTFSFNKGAFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSV 670 (983)
Q Consensus 621 ~~prLF~~s~~~G~~~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a 670 (983)
..|+||.+++. |. .+-...+.+-|.++.|||||++..||||+|+.+
T Consensus 623 iyP~L~~~~~~-~~---P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v 668 (769)
T 2nut_A 623 IQPILYAYSFS-GP---PEPVLLDSSSILADRILLMDTFFQILIYHGETI 668 (769)
T ss_dssp HSCEEEEECSS-SS---CEECCSSGGGCCTTCEEEEECSSEEEEEECHHH
T ss_pred hcCEEEeccCC-CC---CCceeCCHHHccCCCEEEEECCCEEEEEECCcc
Confidence 46899988764 21 233467888899999999999999999999755
No 39
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=88.80 E-value=0.82 Score=56.24 Aligned_cols=32 Identities=31% Similarity=0.599 Sum_probs=28.2
Q ss_pred ccccccCCCcEEEeeCCCeEEEEEcCCCCHHH
Q 002004 271 LSKSMLENNKCYLLDRGSEVFVWVGRVTQVEE 302 (983)
Q Consensus 271 l~q~~L~~~~vyILD~g~eIyVWiGk~as~~e 302 (983)
++-+-|.++++||||+|..||||+|+.++++-
T Consensus 631 ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~l 662 (751)
T 3eh1_A 631 LSAEKLTREGAFLMDCGSVFYIWVGKGCDNNF 662 (751)
T ss_dssp SSGGGCCTTSEEEEECSSEEEEEECTTCCHHH
T ss_pred CCHHHcccCCEEEEECCCEEEEEECCCCCHHH
Confidence 47778999999999999999999999976543
No 40
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=88.75 E-value=0.55 Score=58.00 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=36.3
Q ss_pred CCeEEEEe-CCceEEEEccccccccCCCcEEEeeCCCeEEEEEcCCCC
Q 002004 253 PPKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQ 299 (983)
Q Consensus 253 ~~rLy~v~-~G~l~~~e~~l~q~~L~~~~vyILD~g~eIyVWiGk~as 299 (983)
-|+||.+. +|. +..+.|+-+-|.++.+||||+|..||||+|+.+.
T Consensus 626 yP~L~~~~~~~~--P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v~ 671 (768)
T 1m2o_A 626 QPTLTSFSMEDD--PQPVLLDSISVKPNTILLLDTFFFILIYHGEQIA 671 (768)
T ss_dssp SCEEEEECSSSC--CEECCSBGGGCCTTCEEEEECSSEEEEEECHHHH
T ss_pred CCeEEEecCCCC--CcceeCcHHHcCCCCEEEEECCCEEEEEECCcch
Confidence 48899887 443 3334488899999999999999999999998653
No 41
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=88.01 E-value=0.87 Score=56.53 Aligned_cols=31 Identities=32% Similarity=0.693 Sum_probs=28.5
Q ss_pred ccccccCCCcEEEeeCCCeEEEEEcCCCCHH
Q 002004 271 LSKSMLENNKCYLLDRGSEVFVWVGRVTQVE 301 (983)
Q Consensus 271 l~q~~L~~~~vyILD~g~eIyVWiGk~as~~ 301 (983)
|+.+.|+++.+||||+|..||+|+|+.++++
T Consensus 673 Ls~~~l~~~g~yLld~G~~i~lwvg~~~~~~ 703 (810)
T 1pcx_A 673 ATSSLFERYGLYLIDNGNELFLWMGGDAVPA 703 (810)
T ss_dssp SSTTSCCTTCEEEEECSSEEEEEECTTCCHH
T ss_pred CCHHHhCcCCEEEEECCCEEEEEeCCCCCHH
Confidence 7888999999999999999999999998754
No 42
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=87.82 E-value=0.83 Score=56.39 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=53.7
Q ss_pred CCeEEEEe-CCceEEEEccccccccCCCcEEEeeCCCeEEEEEcCCCCH---------H---HHHH----HHHHHHHHHH
Q 002004 253 PPKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQV---------E---ERKA----ASQAAEEFIS 315 (983)
Q Consensus 253 ~~rLy~v~-~G~l~~~e~~l~q~~L~~~~vyILD~g~eIyVWiGk~as~---------~---eRk~----A~~~A~~y~~ 315 (983)
-|+||.+. .|. +..+.|+-+-|.++.+||||+|..||||+|+.+.. . .-+. ....|+++++
T Consensus 624 yP~L~~~~~~~~--P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v~~w~~~~~~~~p~~~~~~~~l~~p~~~a~~i~~ 701 (769)
T 2nut_A 624 QPILYAYSFSGP--PEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILH 701 (769)
T ss_dssp SCEEEEECSSSS--CEECCSSGGGCCTTCEEEEECSSEEEEEECHHHHHHHHHTTTTSGGGHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEeccCCCC--CCceeCCHHHccCCCEEEEECCCEEEEEECCcchHHHhCCCCCCchhhhHHHHHHhHHHHHHHHHh
Confidence 47899887 443 33344888999999999999999999999986532 0 1112 2235555544
Q ss_pred hcCCCCCceEEEecCC-CCChhhhhcc
Q 002004 316 SQNRPKSIRITRVIQG-YETYAFKSNF 341 (983)
Q Consensus 316 ~~~rp~~t~i~~V~eG-~Ep~~FK~~F 341 (983)
. |...+.+..+.|| .+-..|+++-
T Consensus 702 ~--R~p~Pr~i~~~~g~sqaRfl~skl 726 (769)
T 2nut_A 702 S--RFPMPRYIDTEHGGSQARFLLSKV 726 (769)
T ss_dssp H--SSSCCEEEEEETTCSTTHHHHHHC
T ss_pred c--CCCCCeEEEEcCCCcHHHHHHHhc
Confidence 3 4333456666665 4444444443
No 43
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=87.50 E-value=0.97 Score=55.77 Aligned_cols=47 Identities=21% Similarity=0.379 Sum_probs=37.2
Q ss_pred CCCcEEEEEecCCceeEeeecccCccCCCCCCEEEEeCCCEEEEEEcCCCC
Q 002004 621 RDPHLFTFSFNKGAFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVD 671 (983)
Q Consensus 621 ~~prLF~~s~~~G~~~v~EI~~F~QdDL~~~dv~ILD~~~eIfVWiG~~a~ 671 (983)
..|+||.++.. |. -+-...+.+-|.++.|||||++..||||+|..+.
T Consensus 625 iyP~L~~~~~~-~~---P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v~ 671 (768)
T 1m2o_A 625 IQPTLTSFSME-DD---PQPVLLDSISVKPNTILLLDTFFFILIYHGEQIA 671 (768)
T ss_dssp HSCEEEEECSS-SC---CEECCSBGGGCCTTCEEEEECSSEEEEEECHHHH
T ss_pred hCCeEEEecCC-CC---CcceeCcHHHcCCCCEEEEECCCEEEEEECCcch
Confidence 46999988764 31 2334678888999999999999999999997553
No 44
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=85.68 E-value=1 Score=56.63 Aligned_cols=29 Identities=34% Similarity=0.761 Sum_probs=27.3
Q ss_pred ccccccCCCcEEEeeCCCeEEEEEcCCCC
Q 002004 271 LSKSMLENNKCYLLDRGSEVFVWVGRVTQ 299 (983)
Q Consensus 271 l~q~~L~~~~vyILD~g~eIyVWiGk~as 299 (983)
|+-+.|+++.+||||+|..||+|+|+.++
T Consensus 789 Ls~~~l~~~g~yLld~G~~i~lWvG~~~~ 817 (926)
T 1m2v_B 789 ATSSLFERYGLYLIDNGNELFLWMGGDAV 817 (926)
T ss_dssp SCSTTCCTTCEEEEECSSEEEEEECTTCC
T ss_pred CcHHHhccCCEEEEECCCEEEEEecCCCC
Confidence 78888999999999999999999999976
No 45
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=68.49 E-value=19 Score=34.80 Aligned_cols=88 Identities=10% Similarity=0.165 Sum_probs=57.2
Q ss_pred ccEEEEEEECc--eeeeCC--CCCcC----eeee-CcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHHHHH
Q 002004 19 VGTEIWRIENF--QPVPLP--KSEHG----KFYM-GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELD 89 (983)
Q Consensus 19 ~gl~IWrIe~~--~~v~vp--~~~~G----~Fys-gd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tveLd 89 (983)
...-|..|++. .++... ...|- .|=+ ..+|+++........+..+.+..|+|.+++.-.++..|..-..|-
T Consensus 33 ~~wi~~~i~~~~~~l~v~~~G~~~~~e~~~~L~~~~~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk 112 (146)
T 1x67_A 33 TDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMA 112 (146)
T ss_dssp CSEEEEEESSSSSCEEEEEEESSCHHHHHHHCCTTSEEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCCcEEEEEeccCCCHHHHHhhCCCCceEEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHH
Confidence 55678888775 222211 11111 1222 346777664332234556777889999999999999999889999
Q ss_pred HHhCCCceEEEeeccCCCHH
Q 002004 90 AVLGGRAVQHRELQGHESDK 109 (983)
Q Consensus 90 ~~lgg~~vq~Re~QG~Es~~ 109 (983)
..|+| +++ ++|..+...
T Consensus 113 ~~l~g--~~~-ei~at~~~e 129 (146)
T 1x67_A 113 SFLKG--AHV-TINARAEED 129 (146)
T ss_dssp HHTTT--EEE-EECCCSGGG
T ss_pred HhcCC--cEE-EEEeCChHH
Confidence 99987 333 778776654
No 46
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=54.73 E-value=30 Score=33.35 Aligned_cols=66 Identities=17% Similarity=0.277 Sum_probs=48.6
Q ss_pred eeeeCcEEEEEEeee-cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCHH
Q 002004 414 KFYSGDCYIVLYTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQ 482 (983)
Q Consensus 414 ~FysgDcYIVlytY~-~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~~ 482 (983)
+|-.++|.-++|.+. +...+.++++..|.|..+..-.++..|..-..|.+.|+|- ++ .+|..++.+
T Consensus 63 ~L~~~~~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~--~~-ei~at~~~e 129 (146)
T 1x67_A 63 ELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGA--HV-TINARAEED 129 (146)
T ss_dssp HCCTTSEEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTE--EE-EECCCSGGG
T ss_pred hCCCCceEEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCc--EE-EEEeCChHH
Confidence 445677777777774 2345678999999999999999998888878888888764 43 456555543
No 47
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=46.93 E-value=33 Score=32.95 Aligned_cols=49 Identities=18% Similarity=0.573 Sum_probs=34.3
Q ss_pred cEEEEE-Eeee-cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCC
Q 002004 419 DCYIVL-YTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKG 467 (983)
Q Consensus 419 DcYIVl-ytY~-~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g 467 (983)
-||++. |.|. .+..+...++.+|.+..+...++..-|..-..|.+.|+|
T Consensus 62 prY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~ 112 (144)
T 2kvk_A 62 PCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEG 112 (144)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT
T ss_pred ceEEEEEeeeccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC
Confidence 356543 4443 233345688889999999999998777666677777876
No 48
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=45.48 E-value=50 Score=31.31 Aligned_cols=57 Identities=18% Similarity=0.171 Sum_probs=40.2
Q ss_pred eeeCcEEEEEEeee-cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHH-HcCCCCeE
Q 002004 415 FYSGDCYIVLYTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCN-SLKGRPVQ 471 (983)
Q Consensus 415 FysgDcYIVlytY~-~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~-~l~g~~vq 471 (983)
|-.++|--++|.|. .+..+..+++.+|.|..+...++..-|..-..|.+ .++|-.++
T Consensus 59 l~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~ 117 (141)
T 1hqz_1 59 FDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQ 117 (141)
T ss_dssp CCTTSCEEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEE
T ss_pred CCCCceEEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEE
Confidence 44455655667773 23345788999999999999999877766666765 77665443
No 49
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=44.66 E-value=56 Score=31.00 Aligned_cols=88 Identities=13% Similarity=0.111 Sum_probs=54.6
Q ss_pred ccEEEEEEECc--eeeeCCC---CCcCeee-----eCcEEEEEEeec-CCCC---CceEEEEEEecCCCChhhHhhHHHH
Q 002004 19 VGTEIWRIENF--QPVPLPK---SEHGKFY-----MGDCYIVLQTTP-GKGG---AYLYDIHFWIGKDTSQDEAGTAAIK 84 (983)
Q Consensus 19 ~gl~IWrIe~~--~~v~vp~---~~~G~Fy-----sgd~YIVL~t~~-~~~~---~~~~~Ih~W~G~~ss~de~g~AA~~ 84 (983)
...-|..|++. .++.... ..|-.|- ..-+|+++.... ...+ +....+.+|++..++.-++..-|..
T Consensus 25 ~~~ii~~i~~~~~~i~v~~~g~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAss 104 (143)
T 1cfy_A 25 YKFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASS 104 (143)
T ss_dssp CSEEEEEECTTSSEEEEEEEECCCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred eeEEEEEEcCCCCEEEEEecCCCCCHHHHHHhCCCCCcEEEEEEeeeecCCCcccccCEEEEEECCCCCChhheeehHhh
Confidence 45778888762 2222111 1222222 456788876422 2222 2456777899999999999988887
Q ss_pred HHHHHHHhCCCceEEEeeccCCCHH
Q 002004 85 TVELDAVLGGRAVQHRELQGHESDK 109 (983)
Q Consensus 85 tveLd~~lgg~~vq~Re~QG~Es~~ 109 (983)
-..|-..|+|-.+ ++|..+...
T Consensus 105 k~~l~~~l~g~~~---~i~a~d~~e 126 (143)
T 1cfy_A 105 KDALRRALNGVST---DVQGTDFSE 126 (143)
T ss_dssp HHHHHHHCTTCCE---EEEESSGGG
T ss_pred HHHHHHhcCCceE---EEEeCChHH
Confidence 7888888977533 566665544
No 50
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=42.16 E-value=44 Score=31.82 Aligned_cols=61 Identities=11% Similarity=0.293 Sum_probs=40.6
Q ss_pred cEEEEEEeee-cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCH
Q 002004 419 DCYIVLYTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPP 481 (983)
Q Consensus 419 DcYIVlytY~-~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~ 481 (983)
-||+| |.|. ...++...++.+|.+..|....+..-|.--..|.+.|+|..+ ..++|..++.
T Consensus 66 ~rY~~-~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~-~~~i~atd~~ 127 (142)
T 1m4j_A 66 PCYVL-FRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHI-KDEVFGTVKE 127 (142)
T ss_dssp CEEEE-EEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGE-EEEEEESSHH
T ss_pred ceEEE-EEcCcCCCCCceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcee-EEEEEeCChH
Confidence 56654 4442 223446788999999999999998777666677788887544 1234555443
No 51
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=38.54 E-value=65 Score=30.61 Aligned_cols=90 Identities=19% Similarity=0.229 Sum_probs=57.7
Q ss_pred ccEEEEEEECceeeeCCCC--------CcCee------eeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHH
Q 002004 19 VGTEIWRIENFQPVPLPKS--------EHGKF------YMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIK 84 (983)
Q Consensus 19 ~gl~IWrIe~~~~v~vp~~--------~~G~F------ysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~ 84 (983)
...-|..|++.+++..... .|-.| -...||+|+........+....+.+|.+..++...+..-|.-
T Consensus 25 ~~~ii~~i~~~~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAss 104 (142)
T 1m4j_A 25 YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAAT 104 (142)
T ss_dssp CSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEEEEcCCEEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCCCceEEEEEEcCCCCCHHHHHHHHHH
Confidence 4577888887654432211 12212 245789988643222234567778899999999998877776
Q ss_pred HHHHHHHhCCCceEEEeeccCCCHH
Q 002004 85 TVELDAVLGGRAVQHRELQGHESDK 109 (983)
Q Consensus 85 tveLd~~lgg~~vq~Re~QG~Es~~ 109 (983)
-..|-..|+|..+ ..++|..+...
T Consensus 105 k~~lk~~l~g~~~-~~~i~atd~~e 128 (142)
T 1m4j_A 105 RATLKKEFGGGHI-KDEVFGTVKED 128 (142)
T ss_dssp HHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred HHHHHHHcCCcee-EEEEEeCChHH
Confidence 6778889988654 22567766644
No 52
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=37.31 E-value=82 Score=29.76 Aligned_cols=57 Identities=14% Similarity=0.358 Sum_probs=39.0
Q ss_pred eeeeCcEEEEEEeee--cCC--CCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 414 KFYSGDCYIVLYTYH--SGD--RKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 414 ~FysgDcYIVlytY~--~~~--~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
.|-.++|--++|.|. ..+ .+...++.+|.|..+...++..-|..-..|.+.++|..+
T Consensus 59 ~L~~~~~rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v 119 (139)
T 1f7s_A 59 CLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 119 (139)
T ss_dssp TSCTTSCEEEEEEEEEECTTSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred hCCCCCceEEEEEeeeeccccCcccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEE
Confidence 344567733445552 122 246788999999999999998777666677777877644
No 53
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=35.89 E-value=90 Score=29.48 Aligned_cols=88 Identities=11% Similarity=0.058 Sum_probs=52.4
Q ss_pred cccEEEEEEECceeeeCCC-C-CcC----eee-eCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHHHHHHHH
Q 002004 18 RVGTEIWRIENFQPVPLPK-S-EHG----KFY-MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDA 90 (983)
Q Consensus 18 ~~gl~IWrIe~~~~v~vp~-~-~~G----~Fy-sgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~ 90 (983)
....-|..|++.+.+.|.. . .|- .|= +.-+|+++.............+.+|+|..++.-++..-|..-..|-.
T Consensus 29 ~~~~ii~~i~~~~~i~v~~~g~~~~el~~~l~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~ 108 (141)
T 1hqz_1 29 DTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVAN 108 (141)
T ss_dssp TCCEEEEEECTTSCEEEEEEESCHHHHHTCCCTTSCEEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCEEEEEeecCCHHHHHhhCCCCceEEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHH
Confidence 4567788888732222211 0 121 122 34577776533222234567788899999999988887776667776
Q ss_pred -HhCCCceEEEeeccCCCH
Q 002004 91 -VLGGRAVQHRELQGHESD 108 (983)
Q Consensus 91 -~lgg~~vq~Re~QG~Es~ 108 (983)
.|+|-.+ ++|..+..
T Consensus 109 ~~l~g~~~---~i~a~~~~ 124 (141)
T 1hqz_1 109 NLFKGYHV---QVTARDED 124 (141)
T ss_dssp HTSCSCSE---EEEESSGG
T ss_pred HhCCceEE---EEEECChH
Confidence 7876544 45555544
No 54
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=35.54 E-value=73 Score=30.37 Aligned_cols=60 Identities=5% Similarity=0.097 Sum_probs=45.1
Q ss_pred ceeeeCcEEEEEEeee---cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEE
Q 002004 413 GKFYSGDCYIVLYTYH---SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 472 (983)
Q Consensus 413 G~FysgDcYIVlytY~---~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~ 472 (983)
.+|-.++|.-.+|.+. .+..+.+.++..|+|..+..-.++..+.....+.+.|+|-.+++
T Consensus 49 ~~L~~~~~~Ya~~r~~~~~~~~~~~K~vfI~W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i 111 (141)
T 1t3y_A 49 QQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEF 111 (141)
T ss_dssp HHCCTTCEEEEEEEEEECSGGGCEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTTSCCCSEEE
T ss_pred hhCCCCceEEEEEEEEecCCCCceeeEEEEEECCCCCCHHHhhhHHHHHHHHHHHhcccEEEE
Confidence 4455677876676663 12346789999999999999999988888888888888765544
No 55
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=35.50 E-value=64 Score=31.70 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=42.8
Q ss_pred eeeCcEEEEEEeee---cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCHH
Q 002004 415 FYSGDCYIVLYTYH---SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQ 482 (983)
Q Consensus 415 FysgDcYIVlytY~---~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~~ 482 (983)
+-.++|--++|.|. ..+.+...++.+|.+..|....+..-|.--..|.+.|+|-.. ++|..++..
T Consensus 75 L~~~~prY~vy~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~---~i~atd~~e 142 (166)
T 1tvj_A 75 LPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH---EWQVNGLDD 142 (166)
T ss_dssp CCTTSCEEEEEEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC---EEEESSGGG
T ss_pred CCCCCcEEEEEeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE---EEEECChHH
Confidence 34455555566663 222356778899999999999998777666677888887544 344444443
No 56
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=33.37 E-value=84 Score=30.83 Aligned_cols=64 Identities=16% Similarity=0.101 Sum_probs=44.2
Q ss_pred eCcEEEEEEee-cCCC-CCceEEEEEEecCCCChhhHhhHHHHHHHHHHHhCCCceEEEeeccCCCHHH
Q 002004 44 MGDCYIVLQTT-PGKG-GAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKF 110 (983)
Q Consensus 44 sgd~YIVL~t~-~~~~-~~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~vq~Re~QG~Es~~F 110 (983)
...||+|+... ..++ .+....+.+|.+..++.-.+-.-|.--..|-..|+|-. .++|..+...+
T Consensus 78 ~~prY~vy~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~---~~i~atd~~el 143 (166)
T 1tvj_A 78 NDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIK---HEWQVNGLDDI 143 (166)
T ss_dssp TSCEEEEEEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCC---CEEEESSGGGT
T ss_pred CCcEEEEEeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCe---EEEEECChHHc
Confidence 46789988642 1222 23456777899999999988877766677888898732 26677766554
No 57
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=33.25 E-value=1.2e+02 Score=28.53 Aligned_cols=54 Identities=11% Similarity=0.353 Sum_probs=38.0
Q ss_pred eCcEEEEEEeee--cCC---CCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 417 SGDCYIVLYTYH--SGD---RKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 417 sgDcYIVlytY~--~~~---~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
.++|--++|.|. ..+ .+...++.+|.|..+...++..-|..-..|.+.|+|-.+
T Consensus 59 ~~~~rY~~~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~ 117 (143)
T 1cfy_A 59 ENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST 117 (143)
T ss_dssp TTCCEEEEEEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred CCCcEEEEEEeeeecCCCcccccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceE
Confidence 455555556653 122 236788899999999999998877777777888876544
No 58
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=32.94 E-value=93 Score=29.20 Aligned_cols=90 Identities=17% Similarity=0.196 Sum_probs=57.0
Q ss_pred ccEEEEEEECceeeeCCCC--------CcC----ee--eeCcEEEEEEeecCCCCCceEEEEEEecCCCChhhHhhHHHH
Q 002004 19 VGTEIWRIENFQPVPLPKS--------EHG----KF--YMGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIK 84 (983)
Q Consensus 19 ~gl~IWrIe~~~~v~vp~~--------~~G----~F--ysgd~YIVL~t~~~~~~~~~~~Ih~W~G~~ss~de~g~AA~~ 84 (983)
...-|.+|++.+++..... .|- .+ -...||+|+........+....+.+|.+..++.-.+-.-|.-
T Consensus 22 ~r~ii~~i~~~~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAss 101 (134)
T 2vac_A 22 VRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAAT 101 (134)
T ss_dssp CSEEEEEEETTEEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEEEecCCEEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCCCceEEEEEEcCCCCCHHHHhHHHHH
Confidence 4467888887654432211 121 22 245789988643222234567778899999999998877766
Q ss_pred HHHHHHHhCCCceEEEeeccCCCHH
Q 002004 85 TVELDAVLGGRAVQHRELQGHESDK 109 (983)
Q Consensus 85 tveLd~~lgg~~vq~Re~QG~Es~~ 109 (983)
-..|-..|+|..+ ..++|..+...
T Consensus 102 k~~lk~~l~g~~~-~~~i~atd~~e 125 (134)
T 2vac_A 102 RATVKKEFGGGHI-KDELFGTVKDD 125 (134)
T ss_dssp HHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred HHHHHHHcCCCee-eEEEEeCChHH
Confidence 6778889988654 22567666543
No 59
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=32.55 E-value=83 Score=29.55 Aligned_cols=61 Identities=15% Similarity=0.299 Sum_probs=40.2
Q ss_pred cEEEEEEeee-cCCCCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCH
Q 002004 419 DCYIVLYTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPP 481 (983)
Q Consensus 419 DcYIVlytY~-~~~~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~ 481 (983)
-||+ +|.|. ...++...++.+|.+..|....+..-|.--..|.+.|+|..+ ...+|..++.
T Consensus 63 prY~-v~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~-~~~i~atd~~ 124 (134)
T 2vac_A 63 PCYL-LYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHI-KDELFGTVKD 124 (134)
T ss_dssp CEEE-EEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGE-EEEEEESSHH
T ss_pred CEEE-EEECCcCCCCCceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCee-eEEEEeCChH
Confidence 4565 44553 223346788999999999999998777666677888887543 1234444443
No 60
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=32.45 E-value=1.1e+02 Score=28.61 Aligned_cols=54 Identities=17% Similarity=0.332 Sum_probs=37.4
Q ss_pred eCcEEEEEEeee--cCCC-CceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCe
Q 002004 417 SGDCYIVLYTYH--SGDR-KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 470 (983)
Q Consensus 417 sgDcYIVlytY~--~~~~-k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~v 470 (983)
.++|--++|.|. ..++ +...++.+|.|..+...++..-|..-..|.+.++|-.+
T Consensus 57 ~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~ 113 (137)
T 1cnu_A 57 ERDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQV 113 (137)
T ss_dssp TTSCEEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred CCCceEEEEEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCceE
Confidence 444544455553 1222 46788999999999999998877766777788876543
No 61
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=31.99 E-value=1.3e+02 Score=28.08 Aligned_cols=62 Identities=13% Similarity=0.290 Sum_probs=40.5
Q ss_pred eCcEEEEEEeee--cCC-CCceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCCH
Q 002004 417 SGDCYIVLYTYH--SGD-RKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPP 481 (983)
Q Consensus 417 sgDcYIVlytY~--~~~-~k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~Rv~qGkEp~ 481 (983)
.++|--++|.|. ..+ .+...++.+|.+..+...++..-|..-..|.+.++|-.+ .+|..++.
T Consensus 59 ~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~---~i~a~d~~ 123 (137)
T 2i2q_A 59 EKDCRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGT---DIQATDFS 123 (137)
T ss_dssp SSSCEEEEEEEEECSSSSCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCE---EEEECCCC
T ss_pred CcCceEEEEEeeeecCCCCccCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCceE---EEEECChH
Confidence 455544555553 122 256788999999999999998777666677777765433 34444443
No 62
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=29.78 E-value=1.4e+02 Score=28.40 Aligned_cols=56 Identities=7% Similarity=0.211 Sum_probs=38.6
Q ss_pred eCcEEEEEEeee--cCCC--CceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCCCeEE
Q 002004 417 SGDCYIVLYTYH--SGDR--KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 472 (983)
Q Consensus 417 sgDcYIVlytY~--~~~~--k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~~vq~ 472 (983)
.++|--++|.|. ..+| +...++.+|.+..|...++..-|..-..|.+.|+|-.+.+
T Consensus 69 ~~~prY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i 128 (148)
T 2xfa_A 69 NTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSL 128 (148)
T ss_dssp TTBCEEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEE
T ss_pred cCCcEEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEE
Confidence 455544556663 1223 4677888999999999999877766667777787665533
No 63
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=29.40 E-value=1.1e+02 Score=29.20 Aligned_cols=35 Identities=9% Similarity=0.218 Sum_probs=27.8
Q ss_pred ceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCC
Q 002004 434 EDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGR 468 (983)
Q Consensus 434 ~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~ 468 (983)
...++.+|.+..|...++..-|.--..|.+.|+|.
T Consensus 86 ~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~ 120 (144)
T 2lj8_A 86 DKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGF 120 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCe
Confidence 46788899999999999987776666777777753
No 64
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=28.20 E-value=78 Score=29.91 Aligned_cols=87 Identities=16% Similarity=0.113 Sum_probs=54.3
Q ss_pred ccEEEEEEECc--eeeeCCCC----Cc----CeeeeCcE-EEEEEee-cCCCC--CceEEEEEEecCCCChhhHhhHHHH
Q 002004 19 VGTEIWRIENF--QPVPLPKS----EH----GKFYMGDC-YIVLQTT-PGKGG--AYLYDIHFWIGKDTSQDEAGTAAIK 84 (983)
Q Consensus 19 ~gl~IWrIe~~--~~v~vp~~----~~----G~Fysgd~-YIVL~t~-~~~~~--~~~~~Ih~W~G~~ss~de~g~AA~~ 84 (983)
...-|..|++. .++..... .| ..|=+++| |+|+... ....+ +....+.+|++..++.-++..-|..
T Consensus 27 ~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KmlyAss 106 (139)
T 1f7s_A 27 HRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASS 106 (139)
T ss_dssp CSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred cEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcccCEEEEEECCCCCChhHheehHHh
Confidence 45778899876 33322111 12 12344555 9887642 22223 3456777899999999999977777
Q ss_pred HHHHHHHhCCCceEEEeeccCCCH
Q 002004 85 TVELDAVLGGRAVQHRELQGHESD 108 (983)
Q Consensus 85 tveLd~~lgg~~vq~Re~QG~Es~ 108 (983)
-..|-..|+|-.+ ++|..+..
T Consensus 107 k~~l~~~l~g~~v---~i~a~d~~ 127 (139)
T 1f7s_A 107 KDRFKRELDGIQV---ELQATDPT 127 (139)
T ss_dssp HHHHHTTCTTCCE---EEEECCTT
T ss_pred HHHHHHhcCCeEE---EEEECChH
Confidence 7778888887544 45555543
No 65
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=25.63 E-value=1.3e+02 Score=28.18 Aligned_cols=90 Identities=9% Similarity=0.072 Sum_probs=54.0
Q ss_pred cccEEEEEEECc--eeeeCC---CCCcCee-----eeCcEEEEEEee-cCCCC-CceEEEEEEecCCCChhhHhhHHHHH
Q 002004 18 RVGTEIWRIENF--QPVPLP---KSEHGKF-----YMGDCYIVLQTT-PGKGG-AYLYDIHFWIGKDTSQDEAGTAAIKT 85 (983)
Q Consensus 18 ~~gl~IWrIe~~--~~v~vp---~~~~G~F-----ysgd~YIVL~t~-~~~~~-~~~~~Ih~W~G~~ss~de~g~AA~~t 85 (983)
....-|.+|++. .++... ...|-.| -+..+|+++... ....+ .....+.+|++..++.-++..-|.--
T Consensus 24 ~~~~ii~~i~~~~~~i~v~~~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk 103 (137)
T 2i2q_A 24 SLRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSK 103 (137)
T ss_dssp CCSEEEEEECTTSSEEEEEEEECCCCHHHHHHTSCSSSCEEEEEEEEECSSSSCEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CceEEEEEECCCCcEEEEecCCCCCCHHHHHHhCCCcCceEEEEEeeeecCCCCccCEEEEEECCCCCChhHhhhhHHHH
Confidence 356778888763 222211 1122222 145678887532 22222 34567778999999999998877777
Q ss_pred HHHHHHhCCCceEEEeeccCCCHHH
Q 002004 86 VELDAVLGGRAVQHRELQGHESDKF 110 (983)
Q Consensus 86 veLd~~lgg~~vq~Re~QG~Es~~F 110 (983)
..|-..|+|- +.++|..+...+
T Consensus 104 ~~l~~~l~g~---~~~i~a~d~~el 125 (137)
T 2i2q_A 104 DTLRRAFTGI---GTDIQATDFSEV 125 (137)
T ss_dssp HHHHTTCCCC---CEEEEECCCC--
T ss_pred HHHHHHhcCc---eEEEEECChHHc
Confidence 7777888764 346676666543
No 66
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=25.48 E-value=1.3e+02 Score=28.65 Aligned_cols=60 Identities=18% Similarity=0.113 Sum_probs=41.3
Q ss_pred eCcEEEEEEee-cCCCC--CceEEEEEEecCCCChhhHhhHHHHHHHHHHHhCCCceEEEeeccCC
Q 002004 44 MGDCYIVLQTT-PGKGG--AYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHE 106 (983)
Q Consensus 44 sgd~YIVL~t~-~~~~~--~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~vq~Re~QG~E 106 (983)
...||+|+... ....| +....+.+|++..++.-++..-|.--..|-..|+|-.+ ++|..+
T Consensus 70 ~~prY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~---~i~atd 132 (148)
T 2xfa_A 70 TECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK---SLEITC 132 (148)
T ss_dssp TBCEEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE---EEEECS
T ss_pred CCcEEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE---EEEEEc
Confidence 45688887642 22333 24566678999999999998777766777788876543 556555
No 67
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=24.82 E-value=1.3e+02 Score=28.63 Aligned_cols=105 Identities=14% Similarity=0.172 Sum_probs=61.6
Q ss_pred CCCccccCChhhh----cC-CccccEEEEEEECcee-eeCC-----CCCcCe----ee-eCcEEEEEEe-ecCCCCC-ce
Q 002004 1 MSTSAKSLDPAFQ----GA-GQRVGTEIWRIENFQP-VPLP-----KSEHGK----FY-MGDCYIVLQT-TPGKGGA-YL 62 (983)
Q Consensus 1 ~~~~~~~~d~~f~----~~-g~~~gl~IWrIe~~~~-v~vp-----~~~~G~----Fy-sgd~YIVL~t-~~~~~~~-~~ 62 (983)
||.|...+++... .+ -++...-|.+|+.... +.|. ...|-. |= +..||+++.. +...++. ..
T Consensus 1 Ma~SGv~v~de~~~af~~lk~~k~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~~~~~~k 80 (144)
T 2kvk_A 1 MAISGVTLEESVRGAIDDLRMKKSRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAGSKREK 80 (144)
T ss_dssp CCCCCCEECHHHHHHHHHHHTTSSSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEETTEEEEE
T ss_pred CCcCCcccCHHHHHHHHHHhcCCceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccCCCCccc
Confidence 7777766665433 21 1224577888865421 2121 112222 21 2457888743 2222222 24
Q ss_pred EEEEEEecCCCChhhHhhHHHHHHHHHHHhCCCceEEEeeccCCCHH
Q 002004 63 YDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 109 (983)
Q Consensus 63 ~~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~vq~Re~QG~Es~~ 109 (983)
....+|.+..++.-++..-|.--..|-..|+| +.++|......
T Consensus 81 ~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~----~~~i~a~d~~e 123 (144)
T 2kvk_A 81 LILIQWIPDTARPREKMMYSASRDALSSVSEG----YLPIQANDESG 123 (144)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT----EEEEEESSGGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC----EEEEEECChHH
Confidence 56778999999999998777766778888987 34677766543
No 68
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=23.86 E-value=71 Score=30.47 Aligned_cols=36 Identities=14% Similarity=0.313 Sum_probs=28.1
Q ss_pred CceeEEEEEccCCCChHHHHHHHHHHHHHHHHcCCC
Q 002004 433 KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGR 468 (983)
Q Consensus 433 k~~~~iy~W~G~~ss~de~~~aa~~a~eL~~~l~g~ 468 (983)
+...++.+|.|..+...++..-|..-..|.+.|+|-
T Consensus 78 ~~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~ 113 (144)
T 2kd5_A 78 REKLILIQWIPDTARPREKMMYSASRDALSSVSEGY 113 (144)
T ss_dssp EEEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS
T ss_pred ccCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe
Confidence 567889999999999999987776555666667664
No 69
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=23.38 E-value=4.5e+02 Score=24.81 Aligned_cols=103 Identities=13% Similarity=0.157 Sum_probs=59.4
Q ss_pred CCCccccCChh----hhcC-CccccEEEEEEECceeeeCC-----CCCcCee----e-eCcEEEEEEe-ecCCCCC-ceE
Q 002004 1 MSTSAKSLDPA----FQGA-GQRVGTEIWRIENFQPVPLP-----KSEHGKF----Y-MGDCYIVLQT-TPGKGGA-YLY 63 (983)
Q Consensus 1 ~~~~~~~~d~~----f~~~-g~~~gl~IWrIe~~~~v~vp-----~~~~G~F----y-sgd~YIVL~t-~~~~~~~-~~~ 63 (983)
||.|...+++. |+.+ .++...-|..|.+.+.+.|. ...|-.| = ...+|+++.. +....+. ...
T Consensus 9 Ma~SGi~vsde~~~af~~lk~~k~~~ii~~i~d~~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~~~~k~ 88 (144)
T 2lj8_A 9 MAMSGVSVADECVTALNDLRHKKSRYVIMHIVDQKSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDGPRDKL 88 (144)
T ss_dssp CCCSSCEECHHHHHHHHHHTTTSSSEEEEEEETTTEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSSSEEEE
T ss_pred cccCCceeCHHHHHHHHHHhcCCceEEEEEEECCcEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCCCcccE
Confidence 77666555543 4432 22344667778765433322 1112112 1 2457888743 2222222 245
Q ss_pred EEEEEecCCCChhhHhhHHHHHHHHHHHhCCCceEEEeeccCCC
Q 002004 64 DIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHES 107 (983)
Q Consensus 64 ~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~vq~Re~QG~Es 107 (983)
.+.+|++..++.-++..-|.--..|-..|+|. +++|..+.
T Consensus 89 vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~----~~i~a~d~ 128 (144)
T 2lj8_A 89 ILISWNPDSGAPRTKMLYSSSRDALVPLTQGF----QGIQANDA 128 (144)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHTTTS----EEEECCGG
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCe----eEEEeCCh
Confidence 66789999999999987777667777888874 25666544
No 70
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=23.26 E-value=2.1e+02 Score=26.63 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=43.1
Q ss_pred eCcEEEEEEeec-CCCC-CceEEEEEEecCCCChhhHhhHHHHHHHHHHHhCCCceEEEeeccCCCHH
Q 002004 44 MGDCYIVLQTTP-GKGG-AYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 109 (983)
Q Consensus 44 sgd~YIVL~t~~-~~~~-~~~~~Ih~W~G~~ss~de~g~AA~~tveLd~~lgg~~vq~Re~QG~Es~~ 109 (983)
+.-+|+++.... ...+ .....+.+|++..++.-++..-|..-..|-..|+|- +.++|..+...
T Consensus 58 ~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~---~~~i~a~~~~e 122 (137)
T 1cnu_A 58 RDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGI---QVEVQATDAAE 122 (137)
T ss_dssp TSCEEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTC---CEEEEECSTTT
T ss_pred CCceEEEEEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCc---eEEEEECChHH
Confidence 356788775322 2222 346677889999999999998887777888889764 33566665543
Done!