BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>002007
MGSDKHSAGLLDTLRMERVRTILTHTHPYPHEHSRHAIIAVVVGCLFFISSDNMHTLIEK
LDNNIKWWSMYACLLGFFYFFSSPFIGKTITPSYSNFSRWYIAWILVAAVYHLPSFQSMG
VDLRMNLSLFLTIFLASVLFLLVFHIIFLGLWYVGLVSRVAGKRPEILTIIQNCVVISVF
CCVFYSHCGNRAVLRHRPLERRNSSWFSLWKKEERNTWLAKFLRMNELKDQVCSSWFAPV
GSASDYPLLSKWVIYGELGNDNGGSSDEISPIYSLWATFIGLYIANYVVERSTGWALTHP
LSVEEYEKMKKKQLKPEFLDMVPWYSGTSADLFKTVFDLLVSVTVFVGRFDMRMMQAAMN
KDQEGAQHGDLLYDHLSEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTL
PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELK
QYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDL
ALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLK
GRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNFRKFYGTTYES
KAAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIVYFVLVFSMFPQCELNHILREDSFSG
HLRSFFGTVWNAFMYVLEHSYVSFAALILMLLLELGVETCIQHKLLATSGYHTLYQWYRS
VESEHFPDPTGLRARIEQWTFGLYPACIKYLMSAFDIPEVMAVTRSNICKNGMQSLSRGG
AVIYYASVFLYFWVFSTPVVSLVLGSYLYICVNWLHLHFDEAFSSLRIANYKAFTRFHIN
HDGDLEVYTLAVDKVPKEWELDPDWDGELKQPQQLSHLRRFPSKWRAASAHQDPLNTVKI
IDHFVIQQTEKPDLGASNRSVTC

High Scoring Gene Products

Symbol, full name Information P value
AT4G23000 protein from Arabidopsis thaliana 0.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  002007
        (983 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2127148 - symbol:AT4G23000 "AT4G23000" species...  3261  0.        2


>TAIR|locus:2127148 [details] [associations]
            symbol:AT4G23000 "AT4G23000" species:3702 "Arabidopsis
            thaliana" [GO:0004722 "protein serine/threonine phosphatase
            activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016036
            "cellular response to phosphate starvation" evidence=RCA]
            [GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR004843 Pfam:PF00149 EMBL:CP002687
            GO:GO:0016787 IPI:IPI00516675 RefSeq:NP_194031.5 UniGene:At.54483
            ProteinModelPortal:F4JMQ8 PRIDE:F4JMQ8 EnsemblPlants:AT4G23000.1
            GeneID:828399 KEGG:ath:AT4G23000 OMA:WVIYGEL ArrayExpress:F4JMQ8
            Uniprot:F4JMQ8
        Length = 1015

 Score = 3261 (1153.0 bits), Expect = 0., Sum P(2) = 0.
 Identities = 588/748 (78%), Positives = 662/748 (88%)

Query:     1 MGSDKHSAGLLDTLRMERVRTILTHTHPYPHEHSRHAIIAVVVGCLFFISSDNMHTLIEK 60
             MGSDK+SA  L  L+MERVRTILTHT+PYPHEHSRHA+IAVV+GC+FFISS+NMH+L+EK
Sbjct:     1 MGSDKNSARFLHNLKMERVRTILTHTYPYPHEHSRHAMIAVVLGCMFFISSENMHSLVEK 60

Query:    61 LDNNIKWWSMYACLLGFFYFFSSPFIGKTITPSYSNFSRWYIAWILVAAVYHLPSFQSMG 120
             LDNN KWWSMYACLLGFFYFFSSPFI KTI PSYS FSRWYIAWILVAA+YHLPSFQSMG
Sbjct:    61 LDNNFKWWSMYACLLGFFYFFSSPFIKKTIRPSYSTFSRWYIAWILVAALYHLPSFQSMG 120

Query:   121 VDLRMNLSLFLTIFLASXXXXXXXXXXXXXXWYVGLVSRVAGKRPEILTIIQNCVVISVF 180
             +DLRMNLSLFLTI+++S              WY+GLVSRVAG+RPEILTI+Q+C V+S+ 
Sbjct:   121 LDLRMNLSLFLTIYISSIVFLLVFHIIFLGLWYIGLVSRVAGRRPEILTILQSCAVLSIS 180

Query:   181 CCVFYSHCGNRAVLRHRPLERRNSSWFSLWKKEERN-TWLAKFLRMNELKDQVCSSWFAP 239
             CC+FYSHCGNRA  R  PLE+R+SS FSLWK E+ N TWLAKF  ++EL+DQVCSSWFAP
Sbjct:   181 CCIFYSHCGNRAFQRQTPLEKRHSSRFSLWKGEDGNSTWLAKFTHIDELRDQVCSSWFAP 240

Query:   240 VGSASDYPLLSKWVIYGELGNDNGG---SSDEISPIYSLWATFIGLYIANYVVERSTGWA 296
             VGSA DYPLLSKWVIYGEL   NG    SSDEISPIYSLWATFIGLYIANYVVERSTGWA
Sbjct:   241 VGSARDYPLLSKWVIYGELAC-NGSCPDSSDEISPIYSLWATFIGLYIANYVVERSTGWA 299

Query:   297 LTHPLSVEEYEKMKKKQLKPEFLDMVPWYSGTSADLFKTVFDLLVSVTVFVGRFDMRMMQ 356
             L HPLSVE YEK+K++Q+KP FLDMVPWYSGTSADLFKTVFDLLVSVTVF+GRFDMRMMQ
Sbjct:   300 LAHPLSVENYEKLKRQQMKPNFLDMVPWYSGTSADLFKTVFDLLVSVTVFLGRFDMRMMQ 359

Query:   357 AAMNKDQEGAQHGDLLYDHLSEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDS 416
             AAMNKD +G +  +LLYDH ++K D WFDFMADTGDGGNSSYSVA+LLAQP I V  D+ 
Sbjct:   360 AAMNKDCDGNKSKELLYDHFADKTDFWFDFMADTGDGGNSSYSVAKLLAQPFINVPLDND 419

Query:   417 VFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGV 476
               +L RG++LLIGGDLAYPNPSAFTYE+RLF PFEYALQPP WYK D ++VNKPE+P GV
Sbjct:   420 SISLERGNILLIGGDLAYPNPSAFTYEKRLFCPFEYALQPPHWYKTDSISVNKPELPDGV 479

Query:   477 PELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVF 536
              +LK YDGPQC++IPGNHDWFDGLNTFMR++CHKSWLGGWFMPQKKSYFALQLPKGWWVF
Sbjct:   480 SDLKHYDGPQCFLIPGNHDWFDGLNTFMRYVCHKSWLGGWFMPQKKSYFALQLPKGWWVF 539

Query:   537 GLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLIC 596
             GLDLALH DIDVYQF FF++LVKE+VGE D+VII+THEPNWLLDWY+ + +GKN++HLI 
Sbjct:   540 GLDLALHGDIDVYQFNFFSKLVKEKVGENDAVIIITHEPNWLLDWYWKDDTGKNMRHLIF 599

Query:   597 DYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNFRKFYGT 656
             ++LKGRCKLR+AGD+HHYMRHS   SDGPV+V HLLVNGCGGAFLHPTHVF  F KFYG 
Sbjct:   600 EFLKGRCKLRMAGDLHHYMRHSCTQSDGPVHVPHLLVNGCGGAFLHPTHVFRCFSKFYGA 659

Query:   657 TYESKAAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIVYFVLVFSMFPQCELNHILRED 716
             +YESK+AYPSFEDSSRIALGNILKFRKKNWQFDFIGGI+YF+LVFS+FPQCEL HILR D
Sbjct:   660 SYESKSAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIIYFLLVFSLFPQCELGHILRGD 719

Query:   717 SFSGHLRSFFGTVWNAFMYVLEHSYVSF 744
             SFSGHL SFFGTVW++F+YV E SYVSF
Sbjct:   720 SFSGHLGSFFGTVWSSFVYVTEQSYVSF 747

 Score = 966 (345.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 175/222 (78%), Positives = 195/222 (87%)

Query:   756 GVETCIQHKLLATSGYHTLYQWYRSVESEHFPDPTGLRARIEQWTFGLYPACIKYLMSAF 815
             G+E CIQHKLLA SGYHTLYQWY+SVE+EHFPDPTGLR RIEQWTFGLYPACIKYLMSAF
Sbjct:   795 GIEICIQHKLLANSGYHTLYQWYKSVENEHFPDPTGLRDRIEQWTFGLYPACIKYLMSAF 854

Query:   816 DIPEVMAVTRSNICKNGMQSLSRGGAVIYYASVFLYFWVFSTPVVSLVLGSYLYICVNWL 875
             DIPEVMAVTR+NIC+ GM+SLSR GA IYYASVFLYFWVFSTPVVSLV GSYLYI +NWL
Sbjct:   855 DIPEVMAVTRTNICREGMESLSRSGAAIYYASVFLYFWVFSTPVVSLVFGSYLYISINWL 914

Query:   876 HLHFDEAFSSLRIANYKAFTRFHINHDGDLEVYTLAVDKVPKEWELDPDWDGELKQPQQL 935
             H+HFDEAFSSLRIANYK+FTRFHI  DGDLEV+TL VDKVPKEW+LD DWD E +   ++
Sbjct:   915 HIHFDEAFSSLRIANYKSFTRFHIKPDGDLEVFTLGVDKVPKEWKLDKDWDAEPRSTVKM 974

Query:   936 SHLRRFPSKWRAASAHQDPLNTVKIIDHFVIQQTEKPDLGAS 977
             SH RRFPSKW A +  QDP+NTVKI+D FVI ++EK + G S
Sbjct:   975 SHHRRFPSKWCATTLQQDPVNTVKIVDKFVIHRSEK-ETGGS 1015


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      983       960   0.00095  122 3  11 22  0.47    33
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  640 (68 KB)
  Total size of DFA:  578 KB (2256 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  80.92u 0.12s 81.04t   Elapsed:  00:00:04
  Total cpu time:  80.92u 0.12s 81.04t   Elapsed:  00:00:04
  Start:  Fri May 10 04:08:18 2013   End:  Fri May 10 04:08:22 2013

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