Query 002010
Match_columns 982
No_of_seqs 957 out of 6808
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:33:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.8E-84 9.6E-89 802.4 38.7 595 22-623 7-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.4E-64 8.2E-69 624.1 26.4 514 72-591 127-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-60 7.2E-65 583.7 39.0 556 59-616 3-626 (680)
4 4eco_A Uncharacterized protein 100.0 1.2E-59 4E-64 568.7 25.0 490 26-590 29-601 (636)
5 3j0a_A TOLL-like receptor 5; m 100.0 4.5E-57 1.5E-61 564.8 34.5 509 95-616 24-564 (844)
6 3t6q_A CD180 antigen; protein- 100.0 2.3E-57 7.9E-62 549.2 30.1 491 96-615 34-563 (606)
7 4ecn_A Leucine-rich repeat pro 100.0 6.2E-57 2.1E-61 552.2 32.2 500 23-588 265-863 (876)
8 1ziw_A TOLL-like receptor 3; i 100.0 6.1E-56 2.1E-60 544.1 34.9 522 71-594 49-627 (680)
9 3t6q_A CD180 antigen; protein- 100.0 4.4E-56 1.5E-60 538.0 31.7 464 120-612 34-536 (606)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1E-55 3.4E-60 534.8 30.2 517 86-616 25-562 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-54 5.8E-59 541.5 35.2 518 60-594 14-565 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 3.3E-54 1.1E-58 521.6 29.7 511 71-594 32-563 (606)
13 4asz_A BDNF/NT-3 growth factor 100.0 1.8E-52 6.1E-57 452.2 16.0 266 692-981 13-296 (299)
14 2z63_A TOLL-like receptor 4, v 100.0 6.3E-51 2.2E-55 489.3 30.0 518 86-616 21-560 (570)
15 4gt4_A Tyrosine-protein kinase 100.0 1E-51 3.5E-56 448.3 20.8 259 692-973 26-305 (308)
16 3omv_A RAF proto-oncogene seri 100.0 1.4E-51 4.9E-56 444.7 21.2 265 692-978 36-304 (307)
17 4aoj_A High affinity nerve gro 100.0 1.1E-51 3.7E-56 452.4 19.5 265 692-980 41-325 (329)
18 2z81_A CD282 antigen, TOLL-lik 100.0 5.8E-51 2E-55 487.1 22.0 493 59-595 3-516 (549)
19 4eco_A Uncharacterized protein 100.0 9.2E-51 3.2E-55 490.9 21.1 467 119-621 81-609 (636)
20 4b9d_A Serine/threonine-protei 100.0 1.8E-50 6.2E-55 441.9 17.4 251 692-967 24-276 (350)
21 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-50 9.8E-55 432.9 16.8 248 692-965 32-282 (311)
22 4fih_A Serine/threonine-protei 100.0 1.4E-49 4.7E-54 434.3 20.7 249 692-967 74-323 (346)
23 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-49 6.5E-54 432.0 20.3 252 691-971 57-313 (336)
24 4ase_A Vascular endothelial gr 100.0 1.2E-49 4E-54 439.7 15.8 263 691-975 63-348 (353)
25 4ecn_A Leucine-rich repeat pro 100.0 5E-49 1.7E-53 482.3 22.8 474 95-613 323-865 (876)
26 3fpq_A Serine/threonine-protei 100.0 7.8E-49 2.7E-53 420.3 20.7 248 694-967 28-282 (290)
27 2z63_A TOLL-like receptor 4, v 100.0 3.8E-48 1.3E-52 465.2 27.8 483 121-617 9-536 (570)
28 4fie_A Serine/threonine-protei 100.0 2E-48 6.7E-53 435.7 22.7 250 691-967 150-400 (423)
29 3hyh_A Carbon catabolite-derep 100.0 1.4E-48 4.7E-53 414.4 19.1 247 691-967 12-262 (275)
30 2z81_A CD282 antigen, TOLL-lik 100.0 4.2E-48 1.4E-52 462.4 25.1 478 100-616 10-514 (549)
31 2z7x_B TOLL-like receptor 1, v 100.0 4.8E-48 1.6E-52 458.4 21.4 453 98-593 3-485 (520)
32 2z7x_B TOLL-like receptor 1, v 100.0 9.8E-48 3.3E-52 455.8 23.2 451 75-569 4-485 (520)
33 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-48 4E-53 420.8 13.5 248 692-967 24-281 (304)
34 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-46 4.2E-51 458.3 28.0 552 46-616 12-584 (635)
35 3hmm_A TGF-beta receptor type- 100.0 1.4E-47 4.7E-52 417.3 16.2 267 692-975 3-298 (303)
36 4g31_A Eukaryotic translation 100.0 1.3E-46 4.4E-51 407.3 17.1 257 691-972 4-286 (299)
37 4g8a_A TOLL-like receptor 4; l 100.0 2.8E-44 9.6E-49 437.5 31.9 520 63-593 34-584 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.9E-45 3E-49 434.0 22.2 455 96-594 32-515 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.8E-44 6.3E-49 431.2 23.5 450 74-569 34-514 (562)
40 4b99_A Mitogen-activated prote 100.0 1.9E-44 6.6E-49 405.2 17.5 276 692-973 54-352 (398)
41 4f9c_A Cell division cycle 7-r 100.0 2.6E-43 9E-48 392.0 22.0 267 690-967 19-352 (361)
42 3v5w_A G-protein coupled recep 100.0 6E-43 2.1E-47 408.0 21.8 250 691-967 188-449 (689)
43 3v47_A TOLL-like receptor 5B a 100.0 2.9E-42 1E-46 401.6 25.8 387 148-597 14-416 (455)
44 3uto_A Twitchin; kinase, muscl 100.0 2.4E-42 8.2E-47 407.9 21.1 254 689-967 154-410 (573)
45 1ogq_A PGIP-2, polygalacturona 100.0 4.2E-42 1.4E-46 378.1 18.8 292 23-348 2-302 (313)
46 1jl5_A Outer protein YOPM; leu 100.0 2.3E-41 7.9E-46 390.7 25.4 402 144-613 11-430 (454)
47 1jl5_A Outer protein YOPM; leu 100.0 4.7E-42 1.6E-46 396.5 19.6 420 71-594 11-434 (454)
48 2qkw_B Protein kinase; three-h 100.0 2.8E-41 9.7E-46 373.8 23.5 276 690-976 37-317 (321)
49 3v47_A TOLL-like receptor 5B a 100.0 9.5E-42 3.3E-46 397.3 18.3 376 59-473 7-412 (455)
50 2psq_A Fibroblast growth facto 100.0 2.4E-41 8.3E-46 381.0 20.8 261 691-974 80-364 (370)
51 3uim_A Brassinosteroid insensi 100.0 5.9E-41 2E-45 372.2 23.6 278 689-974 27-311 (326)
52 3zgw_A Maternal embryonic leuc 100.0 3E-41 1E-45 375.1 18.4 252 689-967 7-260 (347)
53 3fxz_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 364.2 22.1 250 691-967 19-269 (297)
54 3kul_A Ephrin type-A receptor 100.0 6E-41 2E-45 371.3 18.4 263 691-977 48-316 (325)
55 3tki_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 367.4 21.5 255 690-967 5-261 (323)
56 3fe3_A MAP/microtubule affinit 100.0 1.6E-40 5.5E-45 367.3 19.2 248 691-967 14-264 (328)
57 3p86_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45 363.1 20.9 262 691-975 36-299 (309)
58 1luf_A Muscle-specific tyrosin 100.0 1.4E-40 4.6E-45 372.3 18.3 267 691-980 46-341 (343)
59 3cbl_A C-FES, proto-oncogene t 100.0 4.4E-41 1.5E-45 380.3 14.4 259 691-973 113-373 (377)
60 3lb7_A RAF proto-oncogene seri 100.0 4.7E-40 1.6E-44 361.0 21.7 266 691-978 35-304 (307)
61 1rjb_A FL cytokine receptor; k 100.0 3.6E-40 1.2E-44 368.9 21.0 267 691-979 44-339 (344)
62 2nru_A Interleukin-1 receptor- 100.0 1.5E-39 5E-44 357.8 25.4 267 697-974 36-306 (307)
63 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.3E-40 1.5E-44 354.4 19.9 258 692-976 8-266 (268)
64 3soc_A Activin receptor type-2 100.0 7.2E-41 2.5E-45 370.4 14.1 272 692-973 24-317 (322)
65 3s95_A LIMK-1, LIM domain kina 100.0 3.3E-40 1.1E-44 363.5 19.3 255 692-974 10-282 (310)
66 3bz5_A Internalin-J, INLJ; leu 100.0 2.2E-39 7.5E-44 374.5 26.2 364 85-549 32-395 (457)
67 4hcu_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 355.1 18.0 256 692-974 10-266 (269)
68 1t46_A HOMO sapiens V-KIT hard 100.0 3.1E-40 1.1E-44 364.2 17.8 266 691-978 22-311 (313)
69 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-40 7.5E-45 373.0 16.7 259 692-973 71-344 (367)
70 4eqm_A Protein kinase; transfe 100.0 4.8E-40 1.6E-44 358.8 18.8 263 692-976 11-277 (294)
71 1o6l_A RAC-beta serine/threoni 100.0 8.4E-40 2.9E-44 362.5 21.0 248 692-967 5-260 (337)
72 2yab_A Death-associated protei 100.0 1.1E-39 3.7E-44 365.0 22.0 254 689-967 9-272 (361)
73 1ob3_A PFPK5, cell division co 100.0 1.3E-39 4.5E-44 354.5 22.2 269 692-967 2-280 (288)
74 3tt0_A Basic fibroblast growth 100.0 3E-40 1E-44 374.4 17.6 260 692-974 69-352 (382)
75 3vhe_A Vascular endothelial gr 100.0 2.5E-40 8.4E-45 372.6 16.5 261 691-973 21-354 (359)
76 1qcf_A Haematopoetic cell kina 100.0 5.4E-40 1.8E-44 380.7 19.6 259 692-977 188-447 (454)
77 2ivs_A Proto-oncogene tyrosine 100.0 5.3E-40 1.8E-44 362.6 18.0 260 691-973 22-310 (314)
78 2qol_A Ephrin receptor; recept 100.0 3.6E-40 1.2E-44 371.7 16.8 259 691-973 44-308 (373)
79 3niz_A Rhodanese family protei 100.0 3.6E-39 1.2E-43 354.8 24.2 271 690-967 19-300 (311)
80 2c30_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 355.0 25.2 248 693-967 46-294 (321)
81 2pmi_A Negative RE, cyclin-dep 100.0 2.6E-39 8.9E-44 357.1 21.8 279 691-975 4-303 (317)
82 3poz_A Epidermal growth factor 100.0 8.5E-40 2.9E-44 362.7 17.8 257 692-973 15-277 (327)
83 4euu_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 355.1 24.1 274 692-971 9-306 (319)
84 2y0a_A Death-associated protei 100.0 3.6E-39 1.2E-43 357.2 22.3 255 688-967 7-271 (326)
85 3og7_A AKAP9-BRAF fusion prote 100.0 2E-39 6.9E-44 353.2 19.7 262 691-974 23-288 (289)
86 1opk_A P150, C-ABL, proto-onco 100.0 2.1E-39 7E-44 379.3 21.2 259 692-976 220-480 (495)
87 3gen_A Tyrosine-protein kinase 100.0 1.2E-39 4E-44 354.0 17.5 256 691-973 23-279 (283)
88 2yex_A Serine/threonine-protei 100.0 9E-39 3.1E-43 345.7 23.9 255 690-967 5-261 (276)
89 1k9a_A Carboxyl-terminal SRC k 100.0 3.6E-39 1.2E-43 373.1 22.0 253 691-975 192-446 (450)
90 2pvf_A Fibroblast growth facto 100.0 1.8E-39 6.3E-44 361.3 18.7 261 691-974 34-318 (334)
91 1tki_A Titin; serine kinase, m 100.0 1.9E-39 6.6E-44 358.2 18.6 251 691-967 4-257 (321)
92 3soa_A Calcium/calmodulin-depe 100.0 5.2E-39 1.8E-43 368.9 22.9 256 688-967 7-267 (444)
93 4fr4_A YANK1, serine/threonine 100.0 8.1E-39 2.8E-43 359.7 23.9 251 691-967 14-271 (384)
94 1fot_A TPK1 delta, CAMP-depend 100.0 3.9E-39 1.3E-43 354.6 20.7 246 691-967 5-258 (318)
95 3kex_A Receptor tyrosine-prote 100.0 1.3E-39 4.6E-44 360.8 16.9 257 692-973 13-275 (325)
96 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.6E-39 5.6E-44 376.2 18.3 258 692-976 184-442 (452)
97 2bdw_A Hypothetical protein K1 100.0 5.6E-39 1.9E-43 360.4 22.0 254 689-967 26-284 (362)
98 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-38 4E-43 368.4 25.1 368 103-595 26-393 (457)
99 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.5E-40 2.9E-44 364.9 14.7 249 691-967 22-280 (353)
100 4aw2_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 368.6 20.3 256 691-967 73-338 (437)
101 1mp8_A Focal adhesion kinase 1 100.0 1.8E-39 6.1E-44 352.1 16.7 257 691-973 14-275 (281)
102 3qup_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 359.7 17.2 259 692-973 23-297 (323)
103 3o0g_A Cell division protein k 100.0 1.4E-38 4.8E-43 347.2 23.8 268 692-967 2-282 (292)
104 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.6E-39 1.2E-43 357.0 19.3 247 691-967 8-258 (336)
105 3ugc_A Tyrosine-protein kinase 100.0 7.4E-40 2.5E-44 357.9 13.3 275 692-976 10-293 (295)
106 3dtc_A Mitogen-activated prote 100.0 4.7E-39 1.6E-43 346.9 19.4 254 692-972 7-271 (271)
107 1p4o_A Insulin-like growth fac 100.0 2.1E-39 7.3E-44 359.1 16.6 262 691-975 24-300 (322)
108 3kmu_A ILK, integrin-linked ki 100.0 3.8E-39 1.3E-43 347.5 18.1 256 691-974 9-270 (271)
109 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.6E-39 1.9E-43 358.1 19.9 246 691-967 40-293 (350)
110 2i1m_A Macrophage colony-stimu 100.0 1.9E-39 6.3E-44 361.4 15.9 260 691-972 45-324 (333)
111 3q4u_A Activin receptor type-1 100.0 5.9E-39 2E-43 351.9 19.7 260 691-972 7-300 (301)
112 2zv2_A Calcium/calmodulin-depe 100.0 1.6E-38 5.5E-43 347.8 22.8 249 692-967 13-292 (298)
113 3gni_B Strad alpha; kinase fol 100.0 1.1E-38 3.8E-43 362.9 22.2 274 691-967 24-333 (389)
114 3lzb_A Epidermal growth factor 100.0 4E-39 1.4E-43 356.9 18.0 258 692-974 15-278 (327)
115 4dc2_A Protein kinase C IOTA t 100.0 9.2E-39 3.2E-43 360.4 21.2 250 691-967 51-318 (396)
116 1kob_A Twitchin; kinase, intra 100.0 1.2E-38 4.2E-43 359.7 22.0 255 688-967 47-304 (387)
117 3a62_A Ribosomal protein S6 ki 100.0 8.6E-39 3E-43 354.3 20.2 249 691-967 16-276 (327)
118 3t9t_A Tyrosine-protein kinase 100.0 5.1E-39 1.7E-43 345.8 17.3 256 692-974 8-264 (267)
119 4f0f_A Serine/threonine-protei 100.0 4E-38 1.4E-42 342.7 24.5 254 692-972 19-287 (287)
120 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-38 4.8E-43 355.7 21.4 251 690-967 51-305 (349)
121 4e5w_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43 353.2 16.8 271 692-972 21-300 (302)
122 2xir_A Vascular endothelial gr 100.0 4.7E-39 1.6E-43 355.4 17.0 262 691-974 26-310 (316)
123 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-38 5.2E-43 349.2 21.0 254 692-974 8-263 (307)
124 3dbq_A Dual specificity protei 100.0 1.1E-38 3.7E-43 356.3 19.8 251 692-967 9-273 (343)
125 1xjd_A Protein kinase C, theta 100.0 2.8E-39 9.6E-44 359.3 14.9 248 691-966 16-268 (345)
126 3qd2_B Eukaryotic translation 100.0 7.7E-39 2.6E-43 356.2 18.4 253 690-967 4-325 (332)
127 3c0i_A Peripheral plasma membr 100.0 1.7E-38 5.8E-43 355.5 21.1 254 691-967 23-286 (351)
128 3is5_A Calcium-dependent prote 100.0 2.2E-38 7.6E-43 344.1 21.3 254 689-967 19-278 (285)
129 1qpc_A LCK kinase; alpha beta 100.0 9.1E-39 3.1E-43 346.3 18.1 257 691-974 12-269 (279)
130 2i0e_A Protein kinase C-beta I 100.0 9.3E-39 3.2E-43 356.2 18.6 249 691-967 19-276 (353)
131 3uc3_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 356.3 21.1 252 691-967 19-274 (361)
132 3kfa_A Tyrosine-protein kinase 100.0 1.3E-38 4.4E-43 346.8 19.0 257 691-973 12-270 (288)
133 3c1x_A Hepatocyte growth facto 100.0 4.7E-39 1.6E-43 362.0 16.0 258 693-974 90-355 (373)
134 1u59_A Tyrosine-protein kinase 100.0 1.4E-38 4.8E-43 346.2 18.9 257 692-973 9-271 (287)
135 2zmd_A Dual specificity protei 100.0 1.8E-38 6.2E-43 360.0 20.3 251 692-967 56-320 (390)
136 3a8x_A Protein kinase C IOTA t 100.0 2.3E-38 7.7E-43 352.7 20.6 249 692-967 9-275 (345)
137 1mqb_A Ephrin type-A receptor 100.0 6E-39 2E-43 356.7 15.9 259 692-974 44-309 (333)
138 2y94_A 5'-AMP-activated protei 100.0 2E-38 6.7E-43 366.3 20.7 247 692-967 16-266 (476)
139 4eut_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 362.6 19.0 276 692-974 9-309 (396)
140 3pls_A Macrophage-stimulating 100.0 2.5E-38 8.5E-43 346.4 20.2 259 693-974 22-287 (298)
141 3g33_A Cell division protein k 100.0 2.1E-38 7.2E-43 348.6 19.7 271 690-967 7-296 (308)
142 3f66_A Hepatocyte growth facto 100.0 1.4E-38 4.9E-43 348.3 18.2 260 692-975 25-292 (298)
143 3v8s_A RHO-associated protein 100.0 1.3E-38 4.5E-43 361.3 18.5 253 691-967 68-329 (410)
144 2h8h_A Proto-oncogene tyrosine 100.0 7.1E-39 2.4E-43 378.2 16.8 258 692-976 267-525 (535)
145 2r3i_A Cell division protein k 100.0 8.9E-38 3.1E-42 342.1 24.5 281 692-978 3-296 (299)
146 2a2a_A Death-associated protei 100.0 4.6E-38 1.6E-42 347.9 22.2 255 688-967 8-272 (321)
147 3brb_A Proto-oncogene tyrosine 100.0 8E-39 2.7E-43 352.9 16.0 265 691-978 33-312 (313)
148 2izr_A Casein kinase I isoform 100.0 2.1E-38 7.2E-43 352.1 19.4 258 692-972 9-279 (330)
149 4fvq_A Tyrosine-protein kinase 100.0 7.5E-39 2.6E-43 348.9 15.3 253 692-976 8-277 (289)
150 2r5t_A Serine/threonine-protei 100.0 9.8E-39 3.4E-43 358.6 16.7 246 691-964 37-286 (373)
151 2eue_A Carbon catabolite derep 100.0 2E-38 6.9E-43 342.7 18.4 247 691-967 12-262 (275)
152 3f3z_A Calcium/calmodulin-depe 100.0 4.8E-38 1.6E-42 340.2 21.2 252 689-967 6-261 (277)
153 2acx_A G protein-coupled recep 100.0 3.3E-38 1.1E-42 368.7 21.1 253 692-967 184-444 (576)
154 4agu_A Cyclin-dependent kinase 100.0 2.7E-38 9.1E-43 348.4 19.1 270 691-967 2-284 (311)
155 2yfx_A Tyrosine-protein kinase 100.0 1.6E-38 5.6E-43 352.7 17.4 260 691-973 29-303 (327)
156 3hko_A Calcium/calmodulin-depe 100.0 3.7E-38 1.3E-42 352.8 20.4 268 687-974 21-339 (345)
157 3op5_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 360.2 15.3 267 691-972 34-327 (364)
158 1csn_A Casein kinase-1; phosph 100.0 2.5E-38 8.5E-43 346.4 18.4 260 692-974 10-283 (298)
159 2buj_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 351.2 17.0 267 692-981 29-313 (317)
160 2id5_A Lingo-1, leucine rich r 100.0 5.4E-38 1.8E-42 367.7 22.4 348 243-616 13-360 (477)
161 3fdn_A Serine/threonine-protei 100.0 2.9E-38 1E-42 342.2 18.6 247 691-967 8-257 (279)
162 1fvr_A Tyrosine-protein kinase 100.0 1.8E-38 6.2E-43 352.3 17.3 260 692-977 25-303 (327)
163 3cc6_A Protein tyrosine kinase 100.0 1.9E-38 6.5E-43 344.1 17.0 258 691-974 11-273 (281)
164 4ejn_A RAC-alpha serine/threon 100.0 1.5E-38 5.3E-43 368.0 17.3 249 691-967 147-404 (446)
165 3mtl_A Cell division protein k 100.0 1.4E-38 4.7E-43 352.4 16.2 268 692-967 2-281 (324)
166 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.4E-38 1.2E-42 350.1 19.1 270 690-967 32-318 (329)
167 3ork_A Serine/threonine protei 100.0 1E-38 3.4E-43 351.6 14.7 257 691-969 11-276 (311)
168 2h34_A Serine/threonine-protei 100.0 3E-38 1E-42 347.3 18.4 265 689-977 31-299 (309)
169 2vd5_A DMPK protein; serine/th 100.0 1.8E-38 6.1E-43 360.4 17.1 255 691-967 60-327 (412)
170 3lxp_A Non-receptor tyrosine-p 100.0 7.7E-39 2.6E-43 353.6 13.5 269 694-974 33-310 (318)
171 2x4f_A Myosin light chain kina 100.0 4E-38 1.4E-42 354.7 19.6 248 695-967 92-342 (373)
172 3kk8_A Calcium/calmodulin depe 100.0 7.5E-38 2.6E-42 340.0 21.0 252 691-967 5-261 (284)
173 3a7i_A MST3 kinase, serine/thr 100.0 8.9E-38 3E-42 342.8 21.6 248 692-967 22-270 (303)
174 2qr7_A Ribosomal protein S6 ki 100.0 5.2E-38 1.8E-42 349.4 19.9 251 689-967 19-277 (342)
175 3dls_A PAS domain-containing s 100.0 5.8E-38 2E-42 348.5 20.2 244 689-967 21-274 (335)
176 2v62_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 352.8 17.9 269 692-976 37-330 (345)
177 2ozo_A Tyrosine-protein kinase 100.0 5.4E-38 1.8E-42 375.9 21.1 249 699-972 343-596 (613)
178 3cok_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 340.8 18.3 250 691-967 10-262 (278)
179 3kn6_A Ribosomal protein S6 ki 100.0 4.6E-38 1.6E-42 348.0 18.8 254 690-967 6-270 (325)
180 1o6v_A Internalin A; bacterial 100.0 4.7E-37 1.6E-41 358.1 28.3 347 142-591 44-390 (466)
181 1xbb_A Tyrosine-protein kinase 100.0 3.2E-38 1.1E-42 344.1 17.2 256 692-973 16-278 (291)
182 1nxk_A MAP kinase-activated pr 100.0 1.7E-37 5.9E-42 353.0 23.8 250 690-967 59-321 (400)
183 1o6v_A Internalin A; bacterial 100.0 4.1E-37 1.4E-41 358.6 27.4 327 238-615 65-391 (466)
184 3mdy_A Bone morphogenetic prot 100.0 1.2E-37 4.3E-42 347.3 22.0 267 688-976 33-333 (337)
185 3llt_A Serine/threonine kinase 100.0 4.8E-38 1.7E-42 353.9 18.8 265 691-967 34-355 (360)
186 3lxl_A Tyrosine-protein kinase 100.0 2.1E-38 7.3E-43 351.7 15.5 273 692-975 23-304 (327)
187 3lm5_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 345.8 20.9 258 687-967 23-287 (327)
188 3i6u_A CDS1, serine/threonine- 100.0 5.4E-38 1.9E-42 359.7 19.0 255 688-967 131-399 (419)
189 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-37 4E-42 363.6 22.1 254 692-967 185-448 (543)
190 1byg_A CSK, protein (C-termina 100.0 2E-38 6.9E-43 343.3 14.5 252 691-974 20-273 (278)
191 3oz6_A Mitogen-activated prote 100.0 4.8E-38 1.6E-42 357.4 18.1 272 689-967 6-328 (388)
192 1vzo_A Ribosomal protein S6 ki 100.0 5.1E-38 1.8E-42 352.1 17.3 254 691-967 53-321 (355)
193 1u5q_A Serine/threonine protei 100.0 9E-38 3.1E-42 348.5 19.1 247 691-967 53-305 (348)
194 3bhy_A Death-associated protei 100.0 2.2E-37 7.6E-42 336.1 21.6 252 691-967 4-265 (283)
195 2vgo_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 338.6 19.0 246 692-967 14-262 (284)
196 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-37 1.2E-41 347.5 23.3 251 692-974 65-339 (365)
197 2rku_A Serine/threonine-protei 100.0 9.5E-38 3.2E-42 341.0 18.1 249 691-967 14-265 (294)
198 3eqc_A Dual specificity mitoge 100.0 1E-37 3.6E-42 351.1 18.8 266 692-967 33-324 (360)
199 3p1a_A MYT1 kinase, membrane-a 100.0 1.8E-37 6.1E-42 341.4 20.2 247 690-967 55-304 (311)
200 3ttj_A Mitogen-activated prote 100.0 8.7E-38 3E-42 361.9 18.4 266 691-967 61-355 (464)
201 2vwi_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 345.3 15.1 263 691-967 14-287 (303)
202 2wtk_C Serine/threonine-protei 100.0 3.2E-37 1.1E-41 338.7 21.9 259 690-973 3-271 (305)
203 1ua2_A CAK, cell division prot 100.0 2.4E-37 8.2E-42 345.8 21.1 272 689-967 7-291 (346)
204 2wqm_A Serine/threonine-protei 100.0 2.1E-37 7.1E-42 341.1 20.3 262 691-974 31-297 (310)
205 2jii_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 353.4 14.6 261 692-973 42-335 (352)
206 2a19_B Interferon-induced, dou 100.0 9.8E-38 3.4E-42 339.1 17.4 251 689-975 8-275 (284)
207 3mi9_A Cell division protein k 100.0 5E-37 1.7E-41 344.3 23.7 273 690-967 15-311 (351)
208 3nyv_A Calmodulin-domain prote 100.0 2.5E-37 8.6E-42 362.2 22.1 252 690-967 24-281 (484)
209 3gxj_A TGF-beta receptor type- 100.0 6E-39 2.1E-43 352.2 7.4 259 692-976 3-299 (303)
210 2y7j_A Phosphorylase B kinase 100.0 4.5E-37 1.6E-41 345.7 22.9 255 688-967 90-359 (365)
211 2owb_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 347.0 17.5 249 691-967 40-291 (335)
212 2w5a_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 341.0 13.8 261 691-973 5-273 (279)
213 1x8b_A WEE1HU, WEE1-like prote 100.0 1.6E-37 5.3E-42 338.3 18.3 246 690-967 9-279 (289)
214 3an0_A Dual specificity mitoge 100.0 1.8E-37 6.2E-42 346.3 19.3 251 692-967 51-310 (340)
215 2jam_A Calcium/calmodulin-depe 100.0 2.7E-37 9.2E-42 339.1 20.2 252 689-967 6-261 (304)
216 1t4h_A Serine/threonine-protei 100.0 3E-37 1E-41 336.3 20.5 250 692-967 26-282 (290)
217 2h6d_A 5'-AMP-activated protei 100.0 1.8E-37 6.1E-42 335.5 18.4 247 692-967 11-261 (276)
218 2ac3_A MAP kinase-interacting 100.0 3E-37 1E-41 340.8 20.4 250 692-967 12-295 (316)
219 3fme_A Dual specificity mitoge 100.0 2.1E-37 7.2E-42 337.6 18.8 252 691-967 6-266 (290)
220 3mwu_A Calmodulin-domain prote 100.0 3.6E-37 1.2E-41 360.7 22.1 254 688-967 18-276 (486)
221 2ycf_A Serine/threonine-protei 100.0 2.4E-37 8.3E-42 342.4 19.5 255 688-967 6-274 (322)
222 2clq_A Mitogen-activated prote 100.0 6.5E-37 2.2E-41 334.6 22.6 251 693-967 23-278 (295)
223 4hgt_A Casein kinase I isoform 100.0 3.7E-37 1.3E-41 336.6 20.5 261 690-974 7-280 (296)
224 3lij_A Calcium/calmodulin depe 100.0 5.5E-37 1.9E-41 359.7 23.4 253 689-967 34-291 (494)
225 2pml_X PFPK7, Ser/Thr protein 100.0 2E-37 6.8E-42 347.3 18.7 267 691-967 30-322 (348)
226 1cm8_A Phosphorylated MAP kina 100.0 1.4E-37 4.6E-42 350.0 17.4 272 691-974 24-316 (367)
227 1b6c_B TGF-B superfamily recep 100.0 3.5E-37 1.2E-41 344.4 20.3 265 688-975 38-337 (342)
228 3com_A Serine/threonine-protei 100.0 6E-37 2.1E-41 338.1 21.8 252 689-967 26-278 (314)
229 4aaa_A Cyclin-dependent kinase 100.0 1E-37 3.5E-42 346.8 15.5 270 691-967 24-306 (331)
230 3uzp_A CKI-delta, CKID, casein 100.0 5.2E-37 1.8E-41 335.5 20.4 259 691-973 8-279 (296)
231 2j7t_A Serine/threonine-protei 100.0 2.5E-37 8.6E-42 339.1 17.9 253 690-967 17-275 (302)
232 3g2f_A Bone morphogenetic prot 100.0 6.1E-38 2.1E-42 349.6 12.9 272 691-973 12-317 (336)
233 2id5_A Lingo-1, leucine rich r 100.0 1E-36 3.4E-41 357.0 23.8 336 232-593 25-360 (477)
234 1blx_A Cyclin-dependent kinase 100.0 8.6E-37 2.9E-41 338.8 21.7 270 691-967 10-296 (326)
235 2w1i_A JAK2; chromosomal rearr 100.0 2E-37 6.7E-42 343.7 16.5 272 692-973 41-321 (326)
236 3eb0_A Putative uncharacterize 100.0 4.8E-37 1.6E-41 348.4 19.9 266 690-967 5-321 (383)
237 4fl3_A Tyrosine-protein kinase 100.0 2.5E-37 8.6E-42 370.8 18.3 249 698-972 375-629 (635)
238 3kvw_A DYRK2, dual specificity 100.0 7.1E-37 2.4E-41 351.3 21.2 265 691-967 96-408 (429)
239 3nsz_A CK II alpha, casein kin 100.0 1.1E-36 3.6E-41 338.7 21.9 261 692-967 36-319 (330)
240 3q5i_A Protein kinase; CDPK, m 100.0 8.1E-37 2.8E-41 359.2 22.1 253 689-967 33-301 (504)
241 1u46_A ACK-1, activated CDC42 100.0 1.8E-37 6.1E-42 338.3 15.1 261 692-976 18-286 (291)
242 3rp9_A Mitogen-activated prote 100.0 5.8E-37 2E-41 356.5 20.0 195 691-891 52-279 (458)
243 3n9x_A Phosphotransferase; mal 100.0 1.1E-36 3.7E-41 350.6 21.5 201 691-897 25-253 (432)
244 3pfq_A PKC-B, PKC-beta, protei 100.0 4E-37 1.4E-41 371.7 18.5 249 691-967 340-597 (674)
245 3qyz_A Mitogen-activated prote 100.0 9.6E-37 3.3E-41 343.5 20.3 269 692-967 27-313 (364)
246 2xrw_A Mitogen-activated prote 100.0 5.5E-37 1.9E-41 346.1 18.2 266 691-967 24-318 (371)
247 2x7f_A TRAF2 and NCK-interacti 100.0 9E-37 3.1E-41 338.6 19.5 252 690-967 22-286 (326)
248 3cek_A Dual specificity protei 100.0 1E-36 3.4E-41 336.1 19.3 251 692-967 28-292 (313)
249 3byv_A Rhoptry kinase; malaria 100.0 7.2E-38 2.5E-42 354.3 10.1 242 691-967 72-359 (377)
250 2y4i_B KSR2, HKSR2, kinase sup 100.0 7E-37 2.4E-41 338.4 17.6 260 691-976 32-304 (319)
251 3pg1_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41 347.4 15.2 272 688-967 18-316 (362)
252 4e7w_A Glycogen synthase kinas 100.0 1.1E-36 3.7E-41 346.2 18.4 270 692-972 40-328 (394)
253 2j0j_A Focal adhesion kinase 1 100.0 5.6E-37 1.9E-41 369.2 16.8 256 692-973 390-650 (656)
254 1phk_A Phosphorylase kinase; g 100.0 3.1E-36 1.1E-40 329.7 21.2 254 689-967 14-283 (298)
255 3sv0_A Casein kinase I-like; t 100.0 1.7E-36 5.7E-41 350.9 19.9 261 691-972 6-276 (483)
256 2wei_A Calmodulin-domain prote 100.0 3.8E-36 1.3E-40 327.0 21.7 255 687-967 17-276 (287)
257 2fst_X Mitogen-activated prote 100.0 2.1E-37 7.3E-42 348.0 12.0 265 691-967 28-311 (367)
258 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-36 4.3E-41 341.5 17.5 275 691-973 10-313 (353)
259 1z57_A Dual specificity protei 100.0 2.1E-36 7.3E-41 337.5 19.2 265 691-967 13-328 (339)
260 1j1b_A Glycogen synthase kinas 100.0 2.3E-36 7.8E-41 346.3 19.9 264 692-967 54-336 (420)
261 3rgf_A Cyclin-dependent kinase 100.0 1.3E-36 4.5E-41 347.5 17.9 268 691-967 19-333 (405)
262 1wak_A Serine/threonine-protei 100.0 2.5E-36 8.4E-41 345.0 18.8 266 691-967 36-391 (397)
263 3o6n_A APL1; leucine-rich repe 100.0 4.3E-36 1.5E-40 341.8 20.3 336 239-616 43-378 (390)
264 1zy4_A Serine/threonine-protei 100.0 2.7E-36 9.2E-41 331.0 17.3 253 690-967 4-283 (303)
265 2vx3_A Dual specificity tyrosi 100.0 2.5E-36 8.5E-41 342.3 17.5 267 690-967 52-372 (382)
266 3e3p_A Protein kinase, putativ 100.0 5.1E-36 1.7E-40 337.5 19.8 272 687-967 18-314 (360)
267 4exu_A Mitogen-activated prote 100.0 2.1E-36 7E-41 341.5 16.5 264 691-967 41-323 (371)
268 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-36 5.1E-41 342.9 14.8 253 692-967 62-352 (371)
269 3aln_A Dual specificity mitoge 100.0 2.8E-36 9.7E-41 334.7 16.6 253 692-967 22-285 (327)
270 3coi_A Mitogen-activated prote 100.0 5.6E-36 1.9E-40 335.9 18.6 263 692-967 24-305 (353)
271 3fhr_A MAP kinase-activated pr 100.0 6.2E-36 2.1E-40 332.6 18.7 251 690-967 26-287 (336)
272 3ll6_A Cyclin G-associated kin 100.0 1.5E-36 5.2E-41 338.5 13.6 256 692-973 28-307 (337)
273 3oja_B Anopheles plasmodium-re 100.0 6.8E-36 2.3E-40 359.0 20.0 336 239-616 49-384 (597)
274 2i6l_A Mitogen-activated prote 100.0 6.9E-36 2.4E-40 330.5 18.0 273 691-973 10-313 (320)
275 2eu9_A Dual specificity protei 100.0 2.7E-35 9.3E-40 330.8 21.1 266 691-967 18-333 (355)
276 1q8y_A SR protein kinase; tran 100.0 1.6E-35 5.4E-40 335.3 19.1 265 692-967 19-333 (373)
277 1ogq_A PGIP-2, polygalacturona 100.0 1E-35 3.4E-40 327.2 16.8 260 337-621 50-313 (313)
278 2dyl_A Dual specificity mitoge 100.0 1.5E-35 5.3E-40 327.4 18.0 252 691-967 24-283 (318)
279 3a99_A Proto-oncogene serine/t 100.0 1.4E-35 4.7E-40 327.7 16.9 242 690-967 41-293 (320)
280 3qa8_A MGC80376 protein; kinas 100.0 2.7E-36 9.2E-41 355.4 11.3 268 689-965 11-295 (676)
281 2rio_A Serine/threonine-protei 100.0 2.6E-35 8.8E-40 339.1 18.3 251 692-967 15-295 (434)
282 2iwi_A Serine/threonine-protei 100.0 1.9E-35 6.5E-40 325.7 16.3 244 688-967 27-283 (312)
283 3p23_A Serine/threonine-protei 100.0 1.6E-35 5.6E-40 339.5 15.8 248 693-967 25-283 (432)
284 3o6n_A APL1; leucine-rich repe 100.0 4.3E-34 1.5E-38 325.2 23.2 311 214-567 43-354 (390)
285 3oja_B Anopheles plasmodium-re 100.0 5.1E-34 1.7E-38 342.6 23.8 311 93-470 49-359 (597)
286 4fmz_A Internalin; leucine ric 100.0 1.4E-33 4.6E-38 315.9 23.8 308 236-589 39-346 (347)
287 4fcg_A Uncharacterized protein 100.0 1.7E-34 5.9E-39 319.2 14.7 272 23-349 23-313 (328)
288 3m2w_A MAP kinase-activated pr 100.0 1.1E-33 3.8E-38 309.3 20.1 230 688-967 13-256 (299)
289 3uqc_A Probable conserved tran 100.0 1.7E-34 6E-39 312.7 13.5 229 692-974 31-265 (286)
290 4fmz_A Internalin; leucine ric 100.0 4.6E-33 1.6E-37 311.6 24.1 308 211-565 39-346 (347)
291 2pzi_A Probable serine/threoni 100.0 6.1E-34 2.1E-38 346.6 15.5 237 692-970 80-324 (681)
292 3dzo_A Rhoptry kinase domain; 100.0 3.9E-34 1.3E-38 327.0 12.4 241 692-967 78-363 (413)
293 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-32 7.2E-37 304.0 23.6 288 266-587 34-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 4.3E-32 1.5E-36 301.3 23.1 290 265-587 31-330 (330)
295 2vuw_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 315.0 9.4 243 691-966 19-329 (336)
296 2ft3_A Biglycan; proteoglycan, 100.0 8.9E-32 3E-36 298.9 22.2 289 241-563 33-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 2E-31 6.7E-36 295.9 23.3 292 239-563 29-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.8E-35 6.3E-40 344.9 -9.9 263 94-376 2-299 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.6E-35 5.3E-40 345.5 -11.6 363 144-566 3-412 (461)
300 3ogk_B Coronatine-insensitive 100.0 3.1E-32 1.1E-36 328.2 -0.9 401 93-514 110-548 (592)
301 2z66_A Variable lymphocyte rec 100.0 4.1E-30 1.4E-34 282.1 15.6 256 56-351 3-262 (306)
302 3ogk_B Coronatine-insensitive 100.0 5.1E-32 1.7E-36 326.4 -2.3 408 135-567 64-528 (592)
303 2z80_A TOLL-like receptor 2, v 100.0 4E-29 1.4E-33 280.1 13.3 279 288-594 30-319 (353)
304 3zyj_A Leucine-rich repeat-con 100.0 4.6E-28 1.6E-32 279.9 20.5 252 58-350 39-292 (440)
305 2z66_A Variable lymphocyte rec 100.0 1.3E-28 4.5E-33 270.0 14.6 256 315-594 30-292 (306)
306 4fcg_A Uncharacterized protein 100.0 5.4E-28 1.9E-32 267.1 19.6 234 336-589 80-314 (328)
307 1wwl_A Monocyte differentiatio 100.0 1.9E-29 6.5E-34 277.2 7.2 255 91-399 39-310 (312)
308 2z80_A TOLL-like receptor 2, v 100.0 2.9E-28 1E-32 273.0 16.7 276 145-449 32-317 (353)
309 3zyi_A Leucine-rich repeat-con 100.0 6.5E-28 2.2E-32 279.6 20.0 253 57-350 49-303 (452)
310 3oja_A Leucine-rich immune mol 100.0 1.1E-30 3.8E-35 304.5 -3.4 237 334-584 31-270 (487)
311 1wwl_A Monocyte differentiatio 99.9 6.6E-29 2.3E-33 272.9 7.4 204 360-590 94-310 (312)
312 3zyj_A Leucine-rich repeat-con 99.9 3.5E-27 1.2E-31 272.5 21.4 249 315-591 45-294 (440)
313 1ozn_A Reticulon 4 receptor; N 99.9 1.1E-27 3.8E-32 259.7 16.2 251 340-616 14-265 (285)
314 3zyi_A Leucine-rich repeat-con 99.9 3.5E-27 1.2E-31 273.5 20.9 250 315-592 56-306 (452)
315 3g06_A SSPH2 (leucine-rich rep 99.9 6.7E-27 2.3E-31 277.7 23.2 268 242-576 41-308 (622)
316 1ozn_A Reticulon 4 receptor; N 99.9 1.8E-27 6.3E-32 258.0 16.0 252 292-594 14-266 (285)
317 3o53_A Protein LRIM1, AGAP0063 99.9 8.8E-29 3E-33 272.6 5.2 263 295-594 16-281 (317)
318 2p1m_B Transport inhibitor res 99.9 8.6E-30 2.9E-34 307.0 -6.3 460 59-588 34-543 (594)
319 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-26 8.6E-31 272.8 22.2 269 216-552 40-308 (622)
320 2p1m_B Transport inhibitor res 99.9 4.2E-30 1.4E-34 309.8 -11.4 418 71-564 66-543 (594)
321 3o53_A Protein LRIM1, AGAP0063 99.9 2.9E-28 1E-32 268.4 4.0 268 242-546 11-281 (317)
322 4azs_A Methyltransferase WBDD; 99.9 8.6E-28 2.9E-32 283.7 3.8 186 699-895 241-437 (569)
323 3oja_A Leucine-rich immune mol 99.9 7E-27 2.4E-31 272.4 9.7 222 359-593 32-255 (487)
324 2o6q_A Variable lymphocyte rec 99.9 2.4E-25 8.3E-30 239.1 18.1 219 57-304 2-220 (270)
325 2z62_A TOLL-like receptor 4, v 99.9 7.6E-25 2.6E-29 236.2 17.5 210 362-595 29-243 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 2.2E-24 7.5E-29 232.6 15.8 205 266-494 29-238 (276)
327 1p9a_G Platelet glycoprotein I 99.9 9.6E-24 3.3E-28 228.5 17.6 203 381-589 6-208 (290)
328 2o6q_A Variable lymphocyte rec 99.9 2.6E-23 9E-28 223.1 20.9 205 363-593 18-222 (270)
329 3en9_A Glycoprotease, O-sialog 99.9 7.2E-25 2.5E-29 257.3 9.2 187 695-897 339-539 (540)
330 3rfs_A Internalin B, repeat mo 99.9 4.9E-24 1.7E-28 229.0 14.9 224 312-595 18-241 (272)
331 3rfs_A Internalin B, repeat mo 99.9 4.7E-24 1.6E-28 229.2 14.3 225 119-406 19-243 (272)
332 2ast_B S-phase kinase-associat 99.9 1.1E-25 3.7E-30 250.4 0.5 268 59-335 36-315 (336)
333 3goz_A Leucine-rich repeat-con 99.9 6.5E-25 2.2E-29 246.4 5.4 259 100-379 3-302 (362)
334 1p9a_G Platelet glycoprotein I 99.9 2.6E-23 9E-28 225.1 17.6 204 333-566 6-209 (290)
335 4glp_A Monocyte differentiatio 99.9 2E-23 6.7E-28 229.0 14.0 227 97-350 66-307 (310)
336 3goz_A Leucine-rich repeat-con 99.9 8.1E-25 2.8E-29 245.7 2.4 255 318-592 3-300 (362)
337 4glp_A Monocyte differentiatio 99.9 3.2E-23 1.1E-27 227.4 11.7 227 339-590 66-308 (310)
338 2ca6_A RAN GTPase-activating p 99.9 5.7E-25 2E-29 249.5 -2.9 249 159-425 23-319 (386)
339 2xwt_C Thyrotropin receptor; s 99.9 8E-23 2.7E-27 215.2 13.2 204 85-347 24-236 (239)
340 2ca6_A RAN GTPase-activating p 99.9 6.2E-25 2.1E-29 249.2 -3.4 249 328-593 23-320 (386)
341 4ay9_X Follicle-stimulating ho 99.9 2.3E-22 7.8E-27 224.5 15.1 246 58-347 7-256 (350)
342 2ast_B S-phase kinase-associat 99.9 5.3E-24 1.8E-28 236.8 0.5 234 144-407 70-315 (336)
343 3m19_A Variable lymphocyte rec 99.9 1.3E-21 4.6E-26 207.3 17.3 183 386-594 15-197 (251)
344 2xwt_C Thyrotropin receptor; s 99.9 7.9E-22 2.7E-26 207.5 14.4 203 232-443 25-236 (239)
345 1h6u_A Internalin H; cell adhe 99.9 8.2E-22 2.8E-26 215.6 14.4 126 239-374 105-230 (308)
346 3m19_A Variable lymphocyte rec 99.9 1.9E-21 6.3E-26 206.3 15.0 178 242-422 15-192 (251)
347 1h6u_A Internalin H; cell adhe 99.9 2.1E-21 7.2E-26 212.3 14.9 196 357-591 37-232 (308)
348 2o6s_A Variable lymphocyte rec 99.8 4.6E-21 1.6E-25 197.0 14.3 134 56-204 3-136 (208)
349 1zar_A RIO2 kinase; serine kin 99.8 1.7E-21 5.8E-26 209.4 8.9 145 694-870 92-253 (282)
350 3cvr_A Invasion plasmid antige 99.8 8.7E-21 3E-25 222.4 15.6 189 338-577 60-255 (571)
351 4ay9_X Follicle-stimulating ho 99.8 1.2E-20 4E-25 210.6 14.7 122 268-392 12-135 (350)
352 3cvr_A Invasion plasmid antige 99.8 1.5E-20 5.3E-25 220.3 15.2 182 386-594 60-248 (571)
353 2o6s_A Variable lymphocyte rec 99.8 7.3E-20 2.5E-24 188.0 14.7 114 474-594 70-183 (208)
354 4b8c_D Glucose-repressible alc 99.8 9.6E-21 3.3E-25 230.6 7.5 241 23-347 128-369 (727)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 4.2E-20 1.4E-24 191.2 10.8 138 457-594 33-171 (220)
356 2v9t_B SLIT homolog 2 protein 99.8 1.3E-19 4.3E-24 187.6 11.4 137 456-592 32-168 (220)
357 3e6j_A Variable lymphocyte rec 99.8 6.4E-19 2.2E-23 183.6 15.4 110 57-181 16-125 (229)
358 1m9s_A Internalin B; cell inva 99.8 3.1E-19 1.1E-23 211.7 14.0 189 121-351 23-211 (605)
359 1dce_A Protein (RAB geranylger 99.8 1.7E-21 5.7E-26 229.9 -6.0 107 482-593 443-550 (567)
360 2xot_A Amphoterin-induced prot 99.8 4.9E-19 1.7E-23 198.3 12.5 175 412-589 21-202 (361)
361 1h6t_A Internalin B; cell adhe 99.8 3.1E-19 1.1E-23 193.3 10.0 190 119-350 24-213 (291)
362 2xot_A Amphoterin-induced prot 99.8 3.6E-19 1.2E-23 199.3 10.2 178 436-615 21-205 (361)
363 3e6j_A Variable lymphocyte rec 99.8 1.8E-18 6.3E-23 180.1 14.7 137 456-593 40-176 (229)
364 1m9s_A Internalin B; cell inva 99.8 1.3E-18 4.5E-23 206.4 15.0 175 237-425 39-213 (605)
365 1h6t_A Internalin B; cell adhe 99.8 1.3E-18 4.4E-23 188.4 13.3 107 476-590 108-214 (291)
366 2v9t_B SLIT homolog 2 protein 99.8 1.2E-18 4E-23 180.3 12.3 155 459-616 14-169 (220)
367 1dce_A Protein (RAB geranylger 99.8 7.8E-21 2.7E-25 224.2 -6.4 204 358-583 346-567 (567)
368 2v70_A SLIT-2, SLIT homolog 2 99.8 4.5E-18 1.5E-22 175.9 14.2 154 413-569 15-170 (220)
369 1w8a_A SLIT protein; signaling 99.7 1.7E-18 5.7E-23 175.1 9.5 155 459-616 11-166 (192)
370 4b8c_D Glucose-repressible alc 99.7 1.1E-18 3.8E-23 212.5 4.8 144 400-570 215-359 (727)
371 1xeu_A Internalin C; cellular 99.7 3.6E-18 1.2E-22 181.8 7.0 167 363-567 21-187 (263)
372 4ezg_A Putative uncharacterize 99.7 1.2E-17 4.1E-22 169.6 10.1 155 405-590 40-195 (197)
373 3sb4_A Hypothetical leucine ri 99.7 2.2E-18 7.6E-23 190.4 3.4 295 84-391 12-327 (329)
374 4ezg_A Putative uncharacterize 99.7 2.2E-17 7.6E-22 167.7 10.5 156 380-566 39-195 (197)
375 1xeu_A Internalin C; cellular 99.7 1.6E-17 5.3E-22 176.9 9.4 172 383-592 17-188 (263)
376 1zth_A RIO1 serine protein kin 99.7 2.1E-17 7.1E-22 175.4 10.1 137 694-844 49-219 (258)
377 1w8a_A SLIT protein; signaling 99.7 6.2E-17 2.1E-21 163.5 12.3 136 457-594 30-167 (192)
378 3sb4_A Hypothetical leucine ri 99.7 1.5E-17 5E-22 183.8 5.5 124 457-583 203-328 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 1.1E-16 3.7E-21 161.7 10.4 131 459-593 13-143 (193)
380 2ell_A Acidic leucine-rich nuc 99.6 2.4E-16 8.1E-21 155.6 9.9 134 456-591 24-162 (168)
381 2o6r_A Variable lymphocyte rec 99.6 7.8E-16 2.7E-20 153.3 11.7 134 458-594 9-142 (177)
382 2je0_A Acidic leucine-rich nuc 99.6 2.5E-16 8.4E-21 152.1 7.7 128 456-585 17-149 (149)
383 2o6r_A Variable lymphocyte rec 99.6 1E-15 3.4E-20 152.5 12.4 139 56-209 3-141 (177)
384 2wfh_A SLIT homolog 2 protein 99.6 1.6E-15 5.6E-20 152.9 11.7 130 483-616 13-143 (193)
385 2ell_A Acidic leucine-rich nuc 99.6 1.4E-15 4.9E-20 150.0 9.8 133 240-374 23-160 (168)
386 4gyi_A RIO2 kinase; protein ki 99.6 4.6E-16 1.6E-20 170.6 5.0 138 694-844 97-265 (397)
387 4fdw_A Leucine rich hypothetic 99.6 4E-14 1.4E-18 159.5 18.8 264 289-588 113-382 (401)
388 2je0_A Acidic leucine-rich nuc 99.6 2.2E-15 7.5E-20 145.4 6.1 128 240-369 16-148 (149)
389 1a9n_A U2A', U2A'; complex (nu 99.5 3.9E-15 1.3E-19 148.1 7.2 133 453-590 16-154 (176)
390 4fdw_A Leucine rich hypothetic 99.5 1.1E-13 3.6E-18 156.0 19.2 241 242-516 136-382 (401)
391 1ds9_A Outer arm dynein; leuci 99.5 3.6E-16 1.2E-20 158.8 -2.5 127 456-589 48-185 (198)
392 3g39_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 140.0 10.3 109 482-593 11-119 (170)
393 4fs7_A Uncharacterized protein 99.5 4.5E-13 1.5E-17 151.6 18.5 310 236-586 66-376 (394)
394 4fs7_A Uncharacterized protein 99.5 7.1E-13 2.4E-17 150.1 19.6 335 204-581 59-393 (394)
395 2r9u_A Variable lymphocyte rec 99.5 9.2E-14 3.1E-18 137.4 10.4 108 483-593 15-122 (174)
396 1a9n_A U2A', U2A'; complex (nu 99.5 3.2E-14 1.1E-18 141.3 7.0 135 404-566 14-154 (176)
397 1ds9_A Outer arm dynein; leuci 99.5 7.7E-16 2.6E-20 156.4 -5.2 155 382-566 15-186 (198)
398 3g39_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 132.8 10.4 109 457-568 10-118 (170)
399 2r9u_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 133.2 9.8 106 458-566 14-119 (174)
400 3un9_A NLR family member X1; l 99.4 3.3E-14 1.1E-18 158.7 -1.5 170 95-285 72-259 (372)
401 3un9_A NLR family member X1; l 99.3 2E-13 6.8E-18 152.3 -1.0 187 144-350 72-283 (372)
402 2ifg_A High affinity nerve gro 99.3 3.9E-12 1.3E-16 141.4 8.4 103 460-565 12-116 (347)
403 2ifg_A High affinity nerve gro 99.2 1.1E-11 3.7E-16 137.8 10.0 132 483-617 11-146 (347)
404 4gt6_A Cell surface protein; l 99.2 4.4E-10 1.5E-14 127.0 20.9 310 258-588 56-369 (394)
405 4gt6_A Cell surface protein; l 99.2 3.6E-10 1.2E-14 127.7 18.7 309 243-588 66-390 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 8.1E-11 2.8E-15 125.1 12.4 145 689-842 11-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 4.7E-10 1.6E-14 119.0 9.1 136 693-842 21-213 (264)
408 2ra8_A Uncharacterized protein 99.0 3.5E-10 1.2E-14 124.8 5.6 163 138-324 166-341 (362)
409 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6.1E-14 120.4 11.3 142 697-843 43-248 (359)
410 2ra8_A Uncharacterized protein 98.9 3.1E-10 1.1E-14 125.3 4.2 162 159-348 163-341 (362)
411 4h09_A Hypothetical leucine ri 98.9 3.8E-08 1.3E-12 110.4 20.2 108 474-584 234-341 (379)
412 3rw6_A Nuclear RNA export fact 98.9 4E-11 1.4E-15 125.3 -4.2 147 59-209 77-237 (267)
413 4h09_A Hypothetical leucine ri 98.8 8.1E-08 2.8E-12 107.8 18.8 303 260-576 41-356 (379)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 3.1E-09 1E-13 115.4 4.2 186 697-896 25-287 (304)
415 3rw6_A Nuclear RNA export fact 98.5 1.3E-08 4.5E-13 106.3 1.2 105 476-582 137-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 1.4E-08 4.9E-13 101.0 -0.2 121 87-207 28-166 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 4.6E-08 1.6E-12 97.3 2.9 124 111-255 28-165 (185)
418 3r70_A Aminoglycoside phosphot 98.4 8.5E-07 2.9E-11 96.7 11.5 135 694-843 39-237 (320)
419 3d1u_A Putative fructosamine-3 98.3 2.7E-06 9.3E-11 90.8 11.9 76 696-776 19-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.2 4.1E-06 1.4E-10 88.9 10.2 133 700-842 32-222 (272)
421 3tdw_A Gentamicin resistance p 98.1 7.9E-06 2.7E-10 88.3 11.3 136 697-843 24-224 (306)
422 3ats_A Putative uncharacterize 98.1 6.6E-06 2.3E-10 91.2 10.2 82 697-778 25-122 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 98.1 7.8E-06 2.7E-10 90.4 9.8 74 697-777 46-122 (362)
424 2olc_A MTR kinase, methylthior 97.9 5.5E-05 1.9E-09 85.0 12.4 76 697-774 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.8 9.1E-06 3.1E-10 78.5 4.2 84 96-203 62-150 (176)
426 3e4g_A ATP synthase subunit S, 97.8 4.7E-06 1.6E-10 80.5 0.9 87 169-276 62-150 (176)
427 2q83_A YTAA protein; 2635576, 97.7 0.00013 4.4E-09 80.2 10.8 139 698-842 38-251 (346)
428 3jr1_A Putative fructosamine-3 97.6 0.00025 8.5E-09 76.1 12.3 137 697-839 41-232 (312)
429 3f7w_A Putative fructosamine-3 97.6 0.00022 7.7E-09 76.1 11.8 77 694-775 17-96 (288)
430 2pyw_A Uncharacterized protein 97.5 0.00061 2.1E-08 77.0 13.4 76 813-892 232-312 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.4 7.9E-05 2.7E-09 73.3 4.4 43 163-205 65-111 (197)
432 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00012 4E-09 72.1 1.0 117 165-302 38-170 (197)
433 3csv_A Aminoglycoside phosphot 97.1 0.0017 5.7E-08 70.8 10.4 140 698-843 24-217 (333)
434 3dxq_A Choline/ethanolamine ki 97.0 0.0023 7.8E-08 68.6 11.1 71 697-776 23-95 (301)
435 3rfe_A Platelet glycoprotein I 96.9 0.0011 3.7E-08 61.0 6.0 55 532-588 12-67 (130)
436 1zyl_A Hypothetical protein YI 96.6 0.011 3.7E-07 64.1 12.4 74 699-775 33-113 (328)
437 1nw1_A Choline kinase (49.2 KD 96.6 0.0044 1.5E-07 69.9 9.4 72 698-776 79-159 (429)
438 2ppq_A HSK, HK, homoserine kin 96.6 0.012 4E-07 63.7 12.2 141 698-842 28-216 (322)
439 3feg_A Choline/ethanolamine ki 96.6 0.0065 2.2E-07 66.9 10.0 140 698-843 56-254 (379)
440 3rfe_A Platelet glycoprotein I 96.5 0.0035 1.2E-07 57.5 6.3 56 508-565 12-68 (130)
441 3i1a_A Spectinomycin phosphotr 96.5 0.011 3.9E-07 64.3 11.4 31 813-843 206-236 (339)
442 2qg7_A Ethanolamine kinase PV0 96.3 0.018 6E-07 65.3 12.1 73 698-776 114-188 (458)
443 3c5i_A Choline kinase; choline 96.3 0.0078 2.7E-07 66.5 9.1 73 698-776 39-121 (369)
444 2yle_A Protein spire homolog 1 96.1 0.044 1.5E-06 54.0 11.5 103 774-895 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.2 0.051 1.7E-06 60.0 9.6 141 698-843 58-280 (401)
446 3mes_A Choline kinase; malaria 94.8 0.099 3.4E-06 58.3 10.4 139 698-843 76-291 (424)
447 3g15_A CK, chetk-alpha, cholin 89.8 0.67 2.3E-05 51.4 8.5 29 815-843 246-280 (401)
448 2jwa_A Receptor tyrosine-prote 84.9 0.63 2.2E-05 32.5 2.7 29 642-670 13-41 (44)
449 2ks1_B Epidermal growth factor 81.8 2.1 7.3E-05 30.0 4.4 28 642-669 12-40 (44)
450 4ann_A ESSB; membrane protein, 80.0 8.6 0.00029 37.8 9.9 116 747-898 43-159 (215)
451 2l2t_A Receptor tyrosine-prote 76.3 2.5 8.4E-05 29.6 3.3 30 641-670 10-40 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 70.4 0.63 2.2E-05 52.6 -1.2 61 696-759 146-214 (463)
453 4ano_A ESSB; membrane protein, 67.7 15 0.00052 36.1 8.2 115 747-897 48-163 (219)
454 2x6h_A GH13170P, VPS34, phosph 39.1 1.5E+02 0.005 34.7 11.4 83 752-842 476-575 (696)
455 3ls8_A Phosphatidylinositol 3- 33.8 1.6E+02 0.0055 33.8 10.4 83 752-842 402-501 (614)
456 1cja_A Protein (actin-fragmin 33.7 45 0.0015 35.0 5.4 140 694-843 71-237 (342)
457 2k1k_A Ephrin type-A receptor 30.7 34 0.0012 23.1 2.5 10 656-665 27-36 (38)
458 3hhm_A Phosphatidylinositol-4, 25.3 2.5E+02 0.0084 34.6 10.5 59 776-842 900-961 (1091)
459 2lz0_A Uncharacterized protein 24.8 1.3E+02 0.0043 25.3 5.8 45 516-561 8-52 (100)
460 2lz0_A Uncharacterized protein 24.0 80 0.0027 26.5 4.4 36 260-296 15-50 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-84 Score=802.39 Aligned_cols=595 Identities=33% Similarity=0.503 Sum_probs=512.3
Q ss_pred hcCchhHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCccceeeeCCCCCEEEEEeccCCcccc---CC----------
Q 002010 22 LSCAYSDMDVLLKLKSSMIGPKGSGLKNWEPSSSPSAHCSFSGVTCDQDSRVVSLNVSFMPLFGS---IP---------- 88 (982)
Q Consensus 22 ~~~~~~~~~~ll~~k~~~~~~~~~~~~~w~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~---~~---------- 88 (982)
..+.++|++|||+||+++.+|. .+++|+. ..+||+|.||+|+ .+||+.++|++.++.|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~--~l~~W~~---~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN--LLPDWSS---NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT--SSTTCCT---TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred ccCCHHHHHHHHHHHhhCCCcc--cccCCCC---CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3456789999999999998665 7999973 3579999999999 78999999999999887 43
Q ss_pred -------------cCccccccccEEEeccCCCCCCCCh--hhhhhcccceeeccCCccccccchhhhhcCCCccEEeccC
Q 002010 89 -------------PEIGLLTKLVNLTISNVNLTGRLPS--EMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYN 153 (982)
Q Consensus 89 -------------~~i~~l~~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 153 (982)
+.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+.+..+..++.++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 5788899999999999999999998 8999999999999999998777765545666666666666
Q ss_pred ccccCCCchh---c----------------------cccccccEEeecCcccccccCCCccccCcceEeeccCcccccch
Q 002010 154 NNFTGPLPVE---I----------------------ASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTV 208 (982)
Q Consensus 154 n~l~~~~p~~---l----------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~ 208 (982)
|++++..|.. + +.+++|++|+|++|++++.+|. ++++++|++|++++|.+.+.+
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 6665554443 2 4566777777777777776776 888888888888888888888
Q ss_pred hhHHhhhhhHHHHhhcccc---------------------cccccCCCCCCCC-CCCCEEecccCcCcccCchhhcCCCc
Q 002010 209 PAFLSRLKNLREMYIGYFN---------------------TYTGGIPPGFGAL-TQLQVLDMASCNISGEIPTSLSRLKL 266 (982)
Q Consensus 209 ~~~l~~l~~L~~L~l~~~n---------------------~~~~~~p~~~~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~ 266 (982)
|..+.++++|++|++++|. .+++.+|..+..+ ++|++|+|++|++++.+|..|+++++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred cHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 8888888888888877642 2233556666554 77777777777777777777777777
Q ss_pred cceeecccccCCCCCCcc-ccCCCCCCEEEeeCCcccCcCchhhhccc-chhhhhhccCCCCCCCCCcCCC--CCCccEE
Q 002010 267 LHSLFLQMNKLTGHIPPQ-LSGLISLKSLDLSLNYLTGEIPESFAALK-NLTLLQLFKNNLRGPIPSFLGD--FPNLEVL 342 (982)
Q Consensus 267 L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L 342 (982)
|++|++++|++++.+|.. +..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+.. +++|++|
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 777777777777666654 77777777777777777777777777776 7888888888887777777766 7889999
Q ss_pred EccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccC
Q 002010 343 QVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLN 422 (982)
Q Consensus 343 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 422 (982)
++++|.+++.+|..+..+++|++|++++|++++.+|..+..+++|++|++++|.+.+.+|..+..+++|++|++++|+++
T Consensus 400 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 479 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479 (768)
T ss_dssp ECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred ECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCccccccCCCccccccCCccccc-CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccc
Q 002010 423 GTIPAGLFNLPLLNMMELDDNLLSGELPEKMSG-ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESF 501 (982)
Q Consensus 423 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 501 (982)
+.+|..+.++++|++|++++|++++.+|..+.. ++|++|++++|++++.+|..++.+++|++|++++|+++|.+|..++
T Consensus 480 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~ 559 (768)
T 3rgz_A 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGG
T ss_pred CcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHh
Confidence 999999999999999999999999999988765 7899999999999999999999999999999999999988886543
Q ss_pred ----------------------------------------------------------------------cccccceeee
Q 002010 502 ----------------------------------------------------------------------NLKMITSINI 511 (982)
Q Consensus 502 ----------------------------------------------------------------------~l~~L~~L~L 511 (982)
.++.|++|||
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdL 639 (768)
T 3rgz_A 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639 (768)
T ss_dssp TTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEEC
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEEC
Confidence 3567899999
Q ss_pred eccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccC
Q 002010 512 SDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGN 591 (982)
Q Consensus 512 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 591 (982)
++|+++|.+|..|++++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++|||++|+|+|.
T Consensus 640 s~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719 (768)
T ss_dssp CSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEE
T ss_pred cCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccccccCCcCcccCCCCCCccC
Q 002010 592 IPSGGQFLAFNETSFIGNPNLCLLRNGTCQSL 623 (982)
Q Consensus 592 ip~~~~~~~~~~~~~~~n~~~c~~~~~~c~~~ 623 (982)
||.+++|.++...+|.|||++||.|.++|+..
T Consensus 720 iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 720 IPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp CCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred CCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 99999999999999999999999998888644
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.4e-64 Score=624.06 Aligned_cols=514 Identities=32% Similarity=0.454 Sum_probs=380.1
Q ss_pred CEEEEEeccCCccccCCcCc-cccccccEEEeccCCCCCCCChh---hhhhcc----------------------cceee
Q 002010 72 RVVSLNVSFMPLFGSIPPEI-GLLTKLVNLTISNVNLTGRLPSE---MALLTS----------------------LKVFN 125 (982)
Q Consensus 72 ~v~~l~l~~~~l~g~~~~~i-~~l~~L~~L~l~~n~l~~~~p~~---l~~l~~----------------------L~~L~ 125 (982)
+...|+++++.+.+.+|..+ +.+++|++|+|++|++++..|.. +.++++ |++|+
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~ 206 (768)
T 3rgz_A 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 206 (768)
T ss_dssp TCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEE
T ss_pred CCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEE
Confidence 56677777777777777665 66777777777777776665554 444444 44444
Q ss_pred ccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccc
Q 002010 126 ISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLN 205 (982)
Q Consensus 126 Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~ 205 (982)
|++|.+.+.++. +.++++|++|++++|++++.+|..++++++|++|+|++|++++.+|.. .+++|++|++++|.+.
T Consensus 207 Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~ 282 (768)
T 3rgz_A 207 VSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 282 (768)
T ss_dssp CCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEE
T ss_pred CcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccC
Confidence 444444443332 445555666666666665555656666666666666666555555543 5555666666666666
Q ss_pred cchhhHHhhh-hhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchh-hcCCCccceeecccccCCCCCCc
Q 002010 206 GTVPAFLSRL-KNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTS-LSRLKLLHSLFLQMNKLTGHIPP 283 (982)
Q Consensus 206 ~~~~~~l~~l-~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~ 283 (982)
+.+|..+.++ ++|++|+++. |.+++.+|..|+++++|++|++++|++++.+|.. +.++++|++|++++|++++.+|.
T Consensus 283 ~~ip~~~~~~~~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~ 361 (768)
T 3rgz_A 283 GEIPDFLSGACDTLTGLDLSG-NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 361 (768)
T ss_dssp ESCCCCSCTTCTTCSEEECCS-SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCT
T ss_pred CccCHHHHhhcCcCCEEECcC-CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccH
Confidence 6666666664 7777777775 5666777777777888888888888777777755 77777788888888877777777
Q ss_pred cccCCC-CCCEEEeeCCcccCcCchhhhc--ccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCC
Q 002010 284 QLSGLI-SLKSLDLSLNYLTGEIPESFAA--LKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRN 360 (982)
Q Consensus 284 ~l~~l~-~L~~L~Ls~N~l~~~~~~~l~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l 360 (982)
.+..++ +|++|++++|.+++.+|..+.. +++|++|++++|++++.+|..++.+++|++|++++|++++.+|..++.+
T Consensus 362 ~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 441 (768)
T 3rgz_A 362 SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441 (768)
T ss_dssp THHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred HHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcC
Confidence 777765 7777777777777766666655 6677777777777777777777777777777777777777777777777
Q ss_pred CcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccC
Q 002010 361 GKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMEL 440 (982)
Q Consensus 361 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 440 (982)
++|++|++++|++++.+|..+..+++|++|++++|.+.+.+|..+.++++|++|++++|++++.+|.++..+++|++|++
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 521 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEEC
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCccccccCCccccc-CCccEEEeeccccCCCCchh--------------------------------------------
Q 002010 441 DDNLLSGELPEKMSG-ASLNQLKVANNNITGKIPAA-------------------------------------------- 475 (982)
Q Consensus 441 ~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~~~~p~~-------------------------------------------- 475 (982)
++|++++.+|..+.. ++|+.|++++|+++|.+|..
T Consensus 522 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (768)
T 3rgz_A 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRS 601 (768)
T ss_dssp CSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCG
T ss_pred CCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccc
Confidence 777777777766654 56777777777776666543
Q ss_pred --------------------------ccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccC
Q 002010 476 --------------------------IGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHS 529 (982)
Q Consensus 476 --------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 529 (982)
++.+++|++|+|++|+++|.+|..+..++.|+.|+|++|+++|.+|..|+++++
T Consensus 602 ~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~ 681 (768)
T 3rgz_A 602 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681 (768)
T ss_dssp GGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred hhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCC
Confidence 445678999999999999999999999999999999999999999999999999
Q ss_pred CCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCc-cccC
Q 002010 530 LTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNN-LIGN 591 (982)
Q Consensus 530 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~ 591 (982)
|+.||||+|+++|.+|..+.++++|++|||++|+++|.+|.. ..+.++....+.+|+ |+|.
T Consensus 682 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 999999999999999999999999999999999999999964 455666677788886 7764
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-60 Score=583.75 Aligned_cols=556 Identities=18% Similarity=0.162 Sum_probs=487.1
Q ss_pred CCccceeeeCC----------CCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccC
Q 002010 59 HCSFSGVTCDQ----------DSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISG 128 (982)
Q Consensus 59 ~C~w~gv~C~~----------~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 128 (982)
.|.+..|.|.. ..+++.|+++++.+.+..+..++.+++|++|+|++|++++..|..++++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 46666777753 13689999999999887777899999999999999999999999999999999999999
Q ss_pred CccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccch
Q 002010 129 NVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTV 208 (982)
Q Consensus 129 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~ 208 (982)
|.+++ ++...+.++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..++++++|++|++++|.+.+..
T Consensus 83 n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 83 NELSQ-LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CccCc-cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 99984 56667889999999999999999888889999999999999999999999999999999999999999999988
Q ss_pred hhHHh--hhhhHHHHhhcccccccccCCCCCCCC---------------------------CCCCEEecccCcCcccCch
Q 002010 209 PAFLS--RLKNLREMYIGYFNTYTGGIPPGFGAL---------------------------TQLQVLDMASCNISGEIPT 259 (982)
Q Consensus 209 ~~~l~--~l~~L~~L~l~~~n~~~~~~p~~~~~l---------------------------~~L~~L~L~~n~l~~~~~~ 259 (982)
+..+. .+++|++|+++. |.+.+..|..++.+ ++|+.|++++|.+++..|.
T Consensus 162 ~~~~~~~~~~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~ 240 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSS-NQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240 (680)
T ss_dssp HHHHGGGTTCEESEEECTT-CCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT
T ss_pred HHHhhccccccccEEECCC-CcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh
Confidence 88776 458999999986 46676667666544 5678888999999988888
Q ss_pred hhcCCCc--cceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCC-----CCCC-
Q 002010 260 SLSRLKL--LHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRG-----PIPS- 331 (982)
Q Consensus 260 ~l~~l~~--L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-----~~p~- 331 (982)
.|..++. |++|++++|++++..|..|..+++|++|++++|.+++..|..|..+++|++|++++|...+ .+|.
T Consensus 241 ~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i 320 (680)
T 1ziw_A 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320 (680)
T ss_dssp TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE
T ss_pred HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc
Confidence 8988865 9999999999998888889999999999999999998889999999999999999876554 2332
Q ss_pred ---cCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccC--CccccCc--cccceeecccccccccCCcc
Q 002010 332 ---FLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTI--PRDLCKG--GKLKSLILMQNFFIGPIPEE 404 (982)
Q Consensus 332 ---~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~~--~~L~~L~l~~N~~~~~~~~~ 404 (982)
.|..+++|++|++++|.+++..+..+..+++|++|++++|.+.... +..+..+ ++|+.|++++|.+.+..|..
T Consensus 321 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 321 DDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred ChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 7888999999999999999988889999999999999999865322 2233333 58999999999999999999
Q ss_pred ccCCCCCCEEEccCCccCCCCC-ccccCCCccccccCCCccccccCCccccc-CCccEEEeeccccC--CCCchhccCCC
Q 002010 405 LGQCKSLTKIRFSKNYLNGTIP-AGLFNLPLLNMMELDDNLLSGELPEKMSG-ASLNQLKVANNNIT--GKIPAAIGNLP 480 (982)
Q Consensus 405 l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~--~~~p~~~~~l~ 480 (982)
+..+++|++|++++|++++.+| ..+..+++|++|++++|++.+..+..+.. ++|+.|++++|.++ +.+|..|..++
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 9999999999999999988776 68889999999999999999888877765 78999999999987 67899999999
Q ss_pred CcceeeeccccccCCCccccccccccceeeeeccccCCCCC--------cccccccCCCeeeCCCCcccCCCCccccccc
Q 002010 481 SLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIP--------YSISQCHSLTSVDLSRNSLYGKIPPGISKLI 552 (982)
Q Consensus 481 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 552 (982)
+|++|++++|++++..|..+..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.+++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 99999999999998777789999999999999999986422 3478999999999999999955556799999
Q ss_pred ccceEEcccccccccCccccccccccceecccCCccccCCCCCc--cccccccccccCCcCcccCC
Q 002010 553 DLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGG--QFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 553 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~--~~~~~~~~~~~~n~~~c~~~ 616 (982)
+|+.|+|++|+|++..+..|..+++|+.|+|++|++++.+|... .+.++....+.||||.|+++
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999998777888999999999999999999877532 46778888999999999865
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.2e-59 Score=568.69 Aligned_cols=490 Identities=21% Similarity=0.302 Sum_probs=313.2
Q ss_pred hhHHHHHHHHHhcccCCCCCCC-------CCCCCCCCCCCCCcc---ceeeeCCCCCEEEEEeccCCccccCCcCccccc
Q 002010 26 YSDMDVLLKLKSSMIGPKGSGL-------KNWEPSSSPSAHCSF---SGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLT 95 (982)
Q Consensus 26 ~~~~~~ll~~k~~~~~~~~~~~-------~~w~~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~ 95 (982)
..|++||.+||+++.++.+... .+|..+ .+||.| .||+|+..+||++|+|+++++.|.+|++++.++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~---~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN---KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS---SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC---CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 4699999999999987766533 389753 679999 999999889999999999999999999999999
Q ss_pred cccEEEeccCCC------CC------CCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEecc-----------
Q 002010 96 KLVNLTISNVNL------TG------RLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAY----------- 152 (982)
Q Consensus 96 ~L~~L~l~~n~l------~~------~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls----------- 152 (982)
+|++|+|++|.+ .| .+|... +..|+ ++++.|.+.+.++..+..-+..+..+++.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 999999999976 34 667665 77788 99999988877665543333333333333
Q ss_pred ---------CccccCCCchhccccccccEEeecCcccccc-----------------cCCCcc--ccCcceEeeccCccc
Q 002010 153 ---------NNNFTGPLPVEIASLKSLRHLSFGGNYFTGK-----------------IPQSYS--EIQSLEYIGLNGIGL 204 (982)
Q Consensus 153 ---------~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~n~i 204 (982)
.|+++| +|..++++++|++|+|++|++++. +|..++ ++++|++|++++|.+
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 466666 666677777777777777776664 555555 555555555554333
Q ss_pred ccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCc-Ccc-cCchhhcCC------Cccceeeccccc
Q 002010 205 NGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCN-ISG-EIPTSLSRL------KLLHSLFLQMNK 276 (982)
Q Consensus 205 ~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~~~~l~~l------~~L~~L~L~~N~ 276 (982)
.+.+|..|+++++|++|++++|+ ++| .+|..++.+ ++|++|++++|+
T Consensus 262 -------------------------~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 262 -------------------------LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp -------------------------CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred -------------------------CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 23344455555666666666665 555 555555554 566666666666
Q ss_pred CCCCCCc--cccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCC-ccEEEccCCCccccc
Q 002010 277 LTGHIPP--QLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPN-LEVLQVWGNNFTFEL 353 (982)
Q Consensus 277 l~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~ 353 (982)
++ .+|. .++.+++|++|++++|+++|.+| .|..+++|++|++++|+++ .+|..+..+++ |++|++++|.++ .+
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 65 4555 55566666666666666655555 5555556666666666555 45555555555 666666665555 44
Q ss_pred CccccCCC--cccEEEeccccccccCCcccc-------CccccceeecccccccccCCccccCCCCCCEEEccCCccCCC
Q 002010 354 PENLGRNG--KLLILDVTSNHLTGTIPRDLC-------KGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGT 424 (982)
Q Consensus 354 ~~~l~~l~--~L~~L~L~~N~l~~~~p~~~~-------~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 424 (982)
|..+..+. +|++|++++|++++.+|..+. .+.+|++|++++|.+....+..+..+++|++|+|++|+++ .
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~ 471 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-E 471 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-B
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-C
Confidence 55444433 555555555555555555444 4444444444444444322223333444444444444444 3
Q ss_pred CCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhcc--CCCCcceeeeccccccCCCcccccc
Q 002010 425 IPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIG--NLPSLNILSLQNNRLEGEIPVESFN 502 (982)
Q Consensus 425 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~ 502 (982)
+|....... .+..-...+|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..
T Consensus 472 i~~~~~~~~---------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~ 534 (636)
T 4eco_A 472 IPKNSLKDE---------------NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLN 534 (636)
T ss_dssp CCSSSSEET---------------TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred cCHHHhccc---------------cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhc
Confidence 332221100 000000127888999999998 6777776 89999999999999986 8888888
Q ss_pred ccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceec
Q 002010 503 LKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLD 582 (982)
Q Consensus 503 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 582 (982)
+++|++|+|++|+ ++++|++.+.+|..+.++++|+.|+|++|+| +.+|..+. ++|+.||
T Consensus 535 l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~ 593 (636)
T 4eco_A 535 SSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLD 593 (636)
T ss_dssp CSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEE
T ss_pred CCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEE
Confidence 9999999997665 4555666666666666666666666666666 35555544 5666666
Q ss_pred ccCCcccc
Q 002010 583 LSYNNLIG 590 (982)
Q Consensus 583 Ls~N~l~~ 590 (982)
|++|++..
T Consensus 594 Ls~N~l~~ 601 (636)
T 4eco_A 594 IKDNPNIS 601 (636)
T ss_dssp CCSCTTCE
T ss_pred CcCCCCcc
Confidence 66665543
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-57 Score=564.83 Aligned_cols=509 Identities=17% Similarity=0.165 Sum_probs=316.7
Q ss_pred ccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEe
Q 002010 95 TKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLS 174 (982)
Q Consensus 95 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 174 (982)
++|++|+|++|.+++..|..+.++++|++|+|++|.+.+.++...+.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 45555555555555555555555555555555555444444444555555555555555555555555555555555555
Q ss_pred ecCcccccccCCC--ccccCcceEeeccCcccccchh-hHHhhhhhHHHHhhcccccccccCCCCCCCC--CCCCEEecc
Q 002010 175 FGGNYFTGKIPQS--YSEIQSLEYIGLNGIGLNGTVP-AFLSRLKNLREMYIGYFNTYTGGIPPGFGAL--TQLQVLDMA 249 (982)
Q Consensus 175 L~~N~l~~~~p~~--~~~l~~L~~L~L~~n~i~~~~~-~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l--~~L~~L~L~ 249 (982)
|++|.+++.+|.. |+++++|++|+|++|.+.+..+ ..++++++|++|+++. |.+.+..|..++.+ ++|+.|+++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~-N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSS-NQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEES-SCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCC-CcCCeeCHHHcccccCCccceEECC
Confidence 5555555544433 5555555555555555554433 3455555555555543 33444444445444 556666666
Q ss_pred cCcCcccCchhhcCCCc------cceeecccccCCCCCCccccCC---CCCCEEEeeC---------CcccCcCchhhhc
Q 002010 250 SCNISGEIPTSLSRLKL------LHSLFLQMNKLTGHIPPQLSGL---ISLKSLDLSL---------NYLTGEIPESFAA 311 (982)
Q Consensus 250 ~n~l~~~~~~~l~~l~~------L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~Ls~---------N~l~~~~~~~l~~ 311 (982)
.|.+.+..|..++.+.+ |++|++++|++++..+..+... .+++.|+++. |.+.+..+..|..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 66666555555544443 6666666666665555544432 4455565552 2333333334444
Q ss_pred c--cchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccce
Q 002010 312 L--KNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKS 389 (982)
Q Consensus 312 l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~ 389 (982)
+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|.+++..|..+..+++|++|++++|++++..|..+..+++|++
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 3 56777777777777666777777777777777777777666677777777777777777777666777777777777
Q ss_pred eecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccC
Q 002010 390 LILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNIT 469 (982)
Q Consensus 390 L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~ 469 (982)
|++++|.+.+..+..|..+++|++|+|++|.+++ +..+++|+.|++++|+++.. |.. ..+++.|++++|+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-----i~~~~~L~~L~l~~N~l~~l-~~~--~~~l~~L~ls~N~l~ 414 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-----IHFIPSIPDIFLSGNKLVTL-PKI--NLTANLIHLSENRLE 414 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-----CSSCCSCSEEEEESCCCCCC-CCC--CTTCCEEECCSCCCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-----ccCCCCcchhccCCCCcccc-ccc--ccccceeecccCccc
Confidence 7777777776666677777777777777777763 22266677777777777633 322 245777777777777
Q ss_pred CCC-chhccCCCCcceeeeccccccCCCcc-ccccccccceeeeeccccC-----CCCCcccccccCCCeeeCCCCcccC
Q 002010 470 GKI-PAAIGNLPSLNILSLQNNRLEGEIPV-ESFNLKMITSINISDNNIS-----GEIPYSISQCHSLTSVDLSRNSLYG 542 (982)
Q Consensus 470 ~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~ 542 (982)
+.. +..+.++++|++|+|++|++++..+. .+..+++|++|+|++|.++ +..+..|.++++|+.|+|++|+|++
T Consensus 415 ~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 494 (844)
T 3j0a_A 415 NLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNS 494 (844)
T ss_dssp SSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTT
T ss_pred cCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccc
Confidence 532 22345777777777777777754332 2445677777777777776 3444567777777777777777777
Q ss_pred CCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 543 KIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 543 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
..|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|.. +..+....+.|||+.|+++
T Consensus 495 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 495 LPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred cChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 7777777777777777777777766665555 67777777777777777743 4566666777777777554
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.3e-57 Score=549.22 Aligned_cols=491 Identities=19% Similarity=0.141 Sum_probs=273.2
Q ss_pred cccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEee
Q 002010 96 KLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSF 175 (982)
Q Consensus 96 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 175 (982)
++++|+|++|++++..|..|.++++|++|+|++|.+.+. .+..|.++++|++|+|++|++++..|..++++++|++|+|
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWI-HEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEE-CTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCcccee-ChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 566777777777666666667777777777777766543 2344566667777777777666666666666777777777
Q ss_pred cCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcc
Q 002010 176 GGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISG 255 (982)
Q Consensus 176 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 255 (982)
++|++++..|..|+++++|++|++++|.+.+..+..+ ..+++|++|++++|.+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-------------------------~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKG-------------------------FPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTT-------------------------CCCTTCCEEECCSSCCCE
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccc-------------------------cCCcccCEEEcccCcccc
Confidence 7777666656666666667777666666553221111 123344444444444443
Q ss_pred cCchhhcCCCccc--eeecccccCCCCCCccccCCCCCCEEEeeCCc---------------------c-----cCcCch
Q 002010 256 EIPTSLSRLKLLH--SLFLQMNKLTGHIPPQLSGLISLKSLDLSLNY---------------------L-----TGEIPE 307 (982)
Q Consensus 256 ~~~~~l~~l~~L~--~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~---------------------l-----~~~~~~ 307 (982)
..|..|+.+++|+ +|++++|++++..|..+.. .+|+.|++++|. + ....+.
T Consensus 168 ~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~ 246 (606)
T 3t6q_A 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPA 246 (606)
T ss_dssp ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGG
T ss_pred cChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChh
Confidence 3333344444443 3344444444333322222 233333333332 0 001112
Q ss_pred hhhccc--chhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCcc
Q 002010 308 SFAALK--NLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGG 385 (982)
Q Consensus 308 ~l~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 385 (982)
.+..+. +|+.|++++|.+++..+..|+.+++|++|++++|.++ .+|..+..+++|++|++++|++++..|..+..++
T Consensus 247 ~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 325 (606)
T 3t6q_A 247 VFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFP 325 (606)
T ss_dssp GGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT
T ss_pred HhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccC
Confidence 222222 4555666666666555555666666666666666655 4555555566666666666666655555556666
Q ss_pred ccceeecccccccccCCc-cccCCCCCCEEEccCCccCCCC--CccccCCCccccccCCCccccccCCccccc-CCccEE
Q 002010 386 KLKSLILMQNFFIGPIPE-ELGQCKSLTKIRFSKNYLNGTI--PAGLFNLPLLNMMELDDNLLSGELPEKMSG-ASLNQL 461 (982)
Q Consensus 386 ~L~~L~l~~N~~~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L 461 (982)
+|++|++++|.+.+.+|. .+..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+..+.. ++|++|
T Consensus 326 ~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 666666666655544433 3555666666666666665443 555556666666666666665555554443 456666
Q ss_pred EeeccccCCCCch-hccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCC---CCcccccccCCCeeeCCC
Q 002010 462 KVANNNITGKIPA-AIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGE---IPYSISQCHSLTSVDLSR 537 (982)
Q Consensus 462 ~L~~N~i~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~ 537 (982)
++++|++++..|. .+..+++|++|++++|++++..|..+..+++|++|++++|++++. .+..+..+++|+.|+|++
T Consensus 406 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 485 (606)
T 3t6q_A 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSF 485 (606)
T ss_dssp ECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTT
T ss_pred ECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCC
Confidence 6666666554433 255666666666666666655555555666666666666666541 224455666666666666
Q ss_pred CcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCCC-ccccccccccccCCcCcccC
Q 002010 538 NSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG-GQFLAFNETSFIGNPNLCLL 615 (982)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~~~~~~~~~~~~n~~~c~~ 615 (982)
|++++..|..|.++++|+.|+|++|++++..|..+..+++| +|+|++|++++.+|.. ..+.++....+.|||+.|++
T Consensus 486 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 486 CDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 66665555666666666666666666666666666666666 6666666666555542 23344555555666666643
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.2e-57 Score=552.20 Aligned_cols=500 Identities=21% Similarity=0.271 Sum_probs=282.2
Q ss_pred cCchhHHHHHHHHHhcccCCCCCCCCCCCCCC----CCCCCCcc------------ceeeeCCCCCEEEEEeccCCcccc
Q 002010 23 SCAYSDMDVLLKLKSSMIGPKGSGLKNWEPSS----SPSAHCSF------------SGVTCDQDSRVVSLNVSFMPLFGS 86 (982)
Q Consensus 23 ~~~~~~~~~ll~~k~~~~~~~~~~~~~w~~~~----~~~~~C~w------------~gv~C~~~~~v~~l~l~~~~l~g~ 86 (982)
++..+|++||++||+++.+| +|+.+. ..+++|.| .||+|+..+||++|+|+++++.|.
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred ccchHHHHHHHHHHHHcCCC------CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 34567999999999999765 676543 23345999 999999889999999999999999
Q ss_pred CCcCccccccccEEEe-ccCCCCCCCChhhhhh---------cccceeec-------cCCccccccchhh----------
Q 002010 87 IPPEIGLLTKLVNLTI-SNVNLTGRLPSEMALL---------TSLKVFNI-------SGNVFQGNFAGQI---------- 139 (982)
Q Consensus 87 ~~~~i~~l~~L~~L~l-~~n~l~~~~p~~l~~l---------~~L~~L~L-------s~n~l~~~~~~~~---------- 139 (982)
+|++++.|++|+.|+| ++|.+.|..|...... ..++...+ ....+.+.....+
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 8898877644221100 00000000 0000000000000
Q ss_pred hhcCCCccEEeccC--ccccCCCchhccccccccEEeecCccccc-----------------ccCCCcc--ccCcceEee
Q 002010 140 VRGMTELQVLDAYN--NNFTGPLPVEIASLKSLRHLSFGGNYFTG-----------------KIPQSYS--EIQSLEYIG 198 (982)
Q Consensus 140 ~~~l~~L~~L~Ls~--n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~ 198 (982)
......++.+.+.. |++++ +|..++++++|++|+|++|+|++ .+|..++ ++++|++|+
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 00111222222322 55554 55555555555555555555555 2555554 555555555
Q ss_pred ccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCc-Ccc-cCchhhcCCC-------ccce
Q 002010 199 LNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCN-ISG-EIPTSLSRLK-------LLHS 269 (982)
Q Consensus 199 L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~~~~l~~l~-------~L~~ 269 (982)
|++|.+.+.+| ..|+++++|++|+|++|+ +++ .+|..+++++ +|++
T Consensus 498 Ls~N~l~~~iP-------------------------~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~ 552 (876)
T 4ecn_A 498 LYNCPNMTQLP-------------------------DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552 (876)
T ss_dssp EESCTTCCSCC-------------------------GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCE
T ss_pred CcCCCCCccCh-------------------------HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccE
Confidence 55555443322 223334444445555554 444 4444443333 5555
Q ss_pred eecccccCCCCCCc--cccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCC-ccEEEccC
Q 002010 270 LFLQMNKLTGHIPP--QLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPN-LEVLQVWG 346 (982)
Q Consensus 270 L~L~~N~l~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~ 346 (982)
|+|++|+++ .+|. .++.+++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|++++
T Consensus 553 L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 553 FYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSH 628 (876)
T ss_dssp EECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCS
T ss_pred EEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcC
Confidence 555555555 4444 4555555555555555555 444 4555555555555555555 44555555555 55555555
Q ss_pred CCcccccCccccCCCc--ccEEEeccccccccCCccc---c--CccccceeecccccccccCCccccCCCCCCEEEccCC
Q 002010 347 NNFTFELPENLGRNGK--LLILDVTSNHLTGTIPRDL---C--KGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKN 419 (982)
Q Consensus 347 N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~p~~~---~--~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N 419 (982)
|.++ .+|..+..+.. |+.|++++|++++.+|... . .+.+|+.|++++|.+....+..+..+++|+.|+|++|
T Consensus 629 N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N 707 (876)
T 4ecn_A 629 NKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNN 707 (876)
T ss_dssp SCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSC
T ss_pred CCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCC
Confidence 5555 44444444432 5555555555555444322 1 2346777777777776333333447788888888888
Q ss_pred ccCCCCCccccCCC--------ccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhcc--CCCCcceeeecc
Q 002010 420 YLNGTIPAGLFNLP--------LLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIG--NLPSLNILSLQN 489 (982)
Q Consensus 420 ~l~~~~p~~~~~l~--------~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~--~l~~L~~L~L~~ 489 (982)
+++ .+|..+.... +|+.|+|++|++ + .+|..+. .+++|+.|+|++
T Consensus 708 ~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L-----------------------~-~lp~~l~~~~l~~L~~L~Ls~ 762 (876)
T 4ecn_A 708 LMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKL-----------------------T-SLSDDFRATTLPYLSNMDVSY 762 (876)
T ss_dssp CCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCC-----------------------C-CCCGGGSTTTCTTCCEEECCS
T ss_pred cCC-ccChHHhccccccccccCCccEEECCCCCC-----------------------c-cchHHhhhccCCCcCEEEeCC
Confidence 887 6666554322 444444444444 4 3444444 555555555555
Q ss_pred ccccCCCccccccccccceeeeec------cccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccccc
Q 002010 490 NRLEGEIPVESFNLKMITSINISD------NNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNG 563 (982)
Q Consensus 490 N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 563 (982)
|++++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|+
T Consensus 763 N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~ 838 (876)
T 4ecn_A 763 NCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNP 838 (876)
T ss_dssp SCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCT
T ss_pred CCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCC
Confidence 55554 455555555555555554 666666666666667777777777766 46666554 466666666666
Q ss_pred ccccCccccccccccceecccCCcc
Q 002010 564 ITGSIPNEMRNMMSLTTLDLSYNNL 588 (982)
Q Consensus 564 l~~~~p~~l~~l~~L~~L~Ls~N~l 588 (982)
+....+..+.....+..+.|.+|++
T Consensus 839 l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 839 NISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp TCEEECGGGHHHHHTTCCEEECCTT
T ss_pred CCccChHHccccccchheeecCCCc
Confidence 6655555555555555555555543
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.1e-56 Score=544.10 Aligned_cols=522 Identities=22% Similarity=0.236 Sum_probs=459.8
Q ss_pred CCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEe
Q 002010 71 SRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLD 150 (982)
Q Consensus 71 ~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 150 (982)
.++..|+++++.+.+..|..++.+++|++|+|++|++++..+..++.+++|++|+|++|.+.+ ++...+.++++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCc-cChhHccccCCCCEEE
Confidence 468899999999999888889999999999999999997666689999999999999999975 4445678899999999
Q ss_pred ccCccccCCCchhccccccccEEeecCcccccccCCCcc--ccCcceEeeccCcccccchhhHHhhhhhH----------
Q 002010 151 AYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYS--EIQSLEYIGLNGIGLNGTVPAFLSRLKNL---------- 218 (982)
Q Consensus 151 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~n~i~~~~~~~l~~l~~L---------- 218 (982)
|++|.+++..|..++++++|++|+|++|.+++..+..++ .+++|++|++++|.+.+..|..+..+.+|
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 999999998999999999999999999999988777665 45899999999999998888887766554
Q ss_pred -----------------HHHhhcccccccccCCCCCCCCCC--CCEEecccCcCcccCchhhcCCCccceeecccccCCC
Q 002010 219 -----------------REMYIGYFNTYTGGIPPGFGALTQ--LQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTG 279 (982)
Q Consensus 219 -----------------~~L~l~~~n~~~~~~p~~~~~l~~--L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 279 (982)
++|++++ +.+.+..|..|.+++. |++|++++|++++..|..|+.+++|++|++++|++++
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~-n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSN-SQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH 286 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTT-SCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSE
T ss_pred ChhhHHHHHHHhhhccccEEEccC-CcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCc
Confidence 4555554 4566777888988865 9999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCEEEeeCCcccCc-----Cc----hhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcc
Q 002010 280 HIPPQLSGLISLKSLDLSLNYLTGE-----IP----ESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFT 350 (982)
Q Consensus 280 ~~~~~l~~l~~L~~L~Ls~N~l~~~-----~~----~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (982)
..|..+.++++|++|++++|...+. +| ..|..+++|++|++++|++.+..+..|.++++|++|++++|.+.
T Consensus 287 ~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~ 366 (680)
T 1ziw_A 287 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 366 (680)
T ss_dssp ECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSC
T ss_pred cChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchh
Confidence 9999999999999999998876542 23 27888999999999999999999999999999999999999865
Q ss_pred cc--cCccccC--CCcccEEEeccccccccCCccccCccccceeecccccccccCC-ccccCCCCCCEEEccCCccCCCC
Q 002010 351 FE--LPENLGR--NGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIP-EELGQCKSLTKIRFSKNYLNGTI 425 (982)
Q Consensus 351 ~~--~~~~l~~--l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~ 425 (982)
.. ....+.. .++|+.|++++|++++..|..+..+++|++|++++|.+.+.+| ..+.++++|++|++++|++++..
T Consensus 367 ~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 446 (680)
T 1ziw_A 367 LRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT 446 (680)
T ss_dssp CCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECC
T ss_pred hhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeC
Confidence 32 2233433 3689999999999999999999999999999999999998766 78999999999999999999888
Q ss_pred CccccCCCccccccCCCcccc--ccCCccccc-CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCc-----
Q 002010 426 PAGLFNLPLLNMMELDDNLLS--GELPEKMSG-ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIP----- 497 (982)
Q Consensus 426 p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~-~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----- 497 (982)
+..|..++.|+.|++++|.+. +..|..+.. .+|+.|++++|++++..+..|.++++|++|++++|++++..+
T Consensus 447 ~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 526 (680)
T 1ziw_A 447 RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPG 526 (680)
T ss_dssp TTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTT
T ss_pred hhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccC
Confidence 999999999999999999987 456666655 789999999999999888899999999999999999985321
Q ss_pred ---cccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccc-
Q 002010 498 ---VESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMR- 573 (982)
Q Consensus 498 ---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~- 573 (982)
..+..+++|++|+|++|+++...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..+.
T Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 606 (680)
T 1ziw_A 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606 (680)
T ss_dssp SCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH
T ss_pred CcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc
Confidence 2378899999999999999966566799999999999999999977777889999999999999999998888887
Q ss_pred cccccceecccCCccccCCCC
Q 002010 574 NMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 574 ~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
.+++|+.|++++|++.+..+.
T Consensus 607 ~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 607 AFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHTTCSEEECTTCCCCBCCCC
T ss_pred cccccCEEEccCCCcccCCcc
Confidence 899999999999999988764
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.4e-56 Score=537.98 Aligned_cols=464 Identities=19% Similarity=0.155 Sum_probs=403.1
Q ss_pred ccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeec
Q 002010 120 SLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGL 199 (982)
Q Consensus 120 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 199 (982)
++++|+|++|.+++.. ...+.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|++
T Consensus 34 ~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred cCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 6899999999998644 456789999999999999999888999999999999999999999999999999999999999
Q ss_pred cCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCC
Q 002010 200 NGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTG 279 (982)
Q Consensus 200 ~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 279 (982)
++|.+.+. .|..++++++|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 113 ~~n~i~~l-------------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 113 IQTGISSI-------------------------DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp TTSCCSCG-------------------------GGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccCcccC-------------------------CcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 99877632 23457888999999999999997554556669999999999999998
Q ss_pred CCCccccCCCCCC--EEEeeCCcccCcCchhhhcccchhhhhhccCCC--------------------------CCCCCC
Q 002010 280 HIPPQLSGLISLK--SLDLSLNYLTGEIPESFAALKNLTLLQLFKNNL--------------------------RGPIPS 331 (982)
Q Consensus 280 ~~~~~l~~l~~L~--~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l--------------------------~~~~p~ 331 (982)
..+..++.+++|+ .|++++|.+++..|..+.. .+|+.|++++|.. ....+.
T Consensus 168 ~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~ 246 (606)
T 3t6q_A 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPA 246 (606)
T ss_dssp ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGG
T ss_pred cChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChh
Confidence 8888999999999 9999999999888877654 5788888887641 011122
Q ss_pred cCCCCC--CccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCC
Q 002010 332 FLGDFP--NLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCK 409 (982)
Q Consensus 332 ~~~~l~--~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~ 409 (982)
.+..+. +|+.|++++|.+++..+..+..+++|++|++++|+++ .+|..+..+++|++|++++|.+.+..|..+..++
T Consensus 247 ~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 325 (606)
T 3t6q_A 247 VFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFP 325 (606)
T ss_dssp GGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT
T ss_pred HhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccC
Confidence 233332 7999999999999888888999999999999999999 8899999999999999999999999999999999
Q ss_pred CCCEEEccCCccCCCCCcc-ccCCCccccccCCCccccccC--Cccccc-CCccEEEeeccccCCCCchhccCCCCccee
Q 002010 410 SLTKIRFSKNYLNGTIPAG-LFNLPLLNMMELDDNLLSGEL--PEKMSG-ASLNQLKVANNNITGKIPAAIGNLPSLNIL 485 (982)
Q Consensus 410 ~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--~~~~~~-~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L 485 (982)
+|++|++++|.+.+.+|.. +..+++|++|++++|.+++.. +..+.. ++|++|++++|++++..|..|..+++|++|
T Consensus 326 ~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 9999999999999877765 889999999999999999875 544443 789999999999999999999999999999
Q ss_pred eeccccccCCCccc-cccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCC---CCcccccccccceEEccc
Q 002010 486 SLQNNRLEGEIPVE-SFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGK---IPPGISKLIDLSILNLSR 561 (982)
Q Consensus 486 ~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~ 561 (982)
++++|++++..|.. +..+++|++|++++|++++..|..+..+++|++|+|++|++++. .+..+..+++|+.|+|++
T Consensus 406 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 485 (606)
T 3t6q_A 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSF 485 (606)
T ss_dssp ECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTT
T ss_pred ECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCC
Confidence 99999999876654 88999999999999999999999999999999999999999873 346799999999999999
Q ss_pred ccccccCccccccccccceecccCCccccCCCCC-ccccccccccccCCcCc
Q 002010 562 NGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG-GQFLAFNETSFIGNPNL 612 (982)
Q Consensus 562 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~~~~~~~~~~~~n~~~ 612 (982)
|++++..|..|..+++|+.|+|++|++++.+|.. ..+..+ ...+.+|...
T Consensus 486 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~ 536 (606)
T 3t6q_A 486 CDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHIS 536 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCC
T ss_pred CccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccc
Confidence 9999999999999999999999999999988753 223344 4455666443
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-55 Score=534.84 Aligned_cols=517 Identities=19% Similarity=0.187 Sum_probs=408.5
Q ss_pred cCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhcc
Q 002010 86 SIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIA 165 (982)
Q Consensus 86 ~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~ 165 (982)
.+|..+. +++++|+|++|++++..+..+.++++|++|+|++|.+++.. +..|.++++|++|+|++|++++..|..|+
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~-~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~ 101 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIE-DKAWHGLHHLSNLILTGNPIQSFSPGSFS 101 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC-TTTTTTCTTCCEEECTTCCCCCCCTTSST
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccC-HHHhhchhhcCEeECCCCcccccChhhcC
Confidence 5676554 78999999999999888889999999999999999998544 45678899999999999999988899999
Q ss_pred ccccccEEeecCcccccccCCCccccCcceEeeccCccccc-chhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCC
Q 002010 166 SLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNG-TVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQ 244 (982)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~-~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~ 244 (982)
++++|++|+|++|++++..+..|+++++|++|++++|.+.+ .+|..++++++|++|++++ |.+++..|..|+.+++|+
T Consensus 102 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~ 180 (606)
T 3vq2_A 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY-NYIQTITVNDLQFLRENP 180 (606)
T ss_dssp TCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS-SCCCEECTTTTHHHHHCT
T ss_pred CcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC-CcceecChhhhhhhhccc
Confidence 99999999999999998888889999999999999999986 5688888898999888886 566667777788777665
Q ss_pred ----EEecccCcCcccCchhhcCCCccceeecccccCC-CCCCccccCCCCCCEEEeeCCcccCc------Cchhhhccc
Q 002010 245 ----VLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLT-GHIPPQLSGLISLKSLDLSLNYLTGE------IPESFAALK 313 (982)
Q Consensus 245 ----~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~Ls~N~l~~~------~~~~l~~l~ 313 (982)
+|++++|.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.+. .+..+..+.
T Consensus 181 ~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~ 259 (606)
T 3vq2_A 181 QVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLC 259 (606)
T ss_dssp TCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGG
T ss_pred cccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhh
Confidence 79999999987666666554 8999999999887 45667788888888888865544321 112222222
Q ss_pred --chhhhhh-ccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCcccccee
Q 002010 314 --NLTLLQL-FKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSL 390 (982)
Q Consensus 314 --~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L 390 (982)
.++.+++ ..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|++ +.+| .+ .+++|++|
T Consensus 260 ~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L 333 (606)
T 3vq2_A 260 DVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSL 333 (606)
T ss_dssp GSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEE
T ss_pred hccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCcccee
Confidence 3444555 66777777776 7888888888888888864 44 777888888888888888 5777 44 88888888
Q ss_pred ecccccccccCCccccCCCCCCEEEccCCccCCC--CCccccCCCccccccCCCccccccCCcccccCCccEEEeecccc
Q 002010 391 ILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGT--IPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNI 468 (982)
Q Consensus 391 ~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i 468 (982)
++++|...+.. .+..+++|++|++++|++++. +|..+..+++|++|++++|.+++.........+|+.|++++|++
T Consensus 334 ~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l 411 (606)
T 3vq2_A 334 TLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTL 411 (606)
T ss_dssp EEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEE
T ss_pred eccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCcc
Confidence 88888655444 566788888888888888765 37778888888888888888876543333347788888888888
Q ss_pred CCCCc-hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCC-CCCcccccccCCCeeeCCCCcccCCCCc
Q 002010 469 TGKIP-AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISG-EIPYSISQCHSLTSVDLSRNSLYGKIPP 546 (982)
Q Consensus 469 ~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 546 (982)
++..| ..+..+++|++|++++|++++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|+|++|++++..|.
T Consensus 412 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 491 (606)
T 3vq2_A 412 KRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWG 491 (606)
T ss_dssp ESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred CCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChh
Confidence 87777 678888888888888888888788888888888888888888887 4677888888888888888888888888
Q ss_pred ccccccccceEEcccccccccCccccccccccceecccCCccccCCCCC-cccc-ccccccccCCcCcccCC
Q 002010 547 GISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG-GQFL-AFNETSFIGNPNLCLLR 616 (982)
Q Consensus 547 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~~~-~~~~~~~~~n~~~c~~~ 616 (982)
.|.++++|+.|+|++|++++.+|..+..+++|++|||++|+++. +|.. ..+. .+....+.|||+.|+++
T Consensus 492 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 492 VFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred hhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 88888888888888888888888888888888888888888884 4433 3333 36667778888888665
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-54 Score=541.50 Aligned_cols=518 Identities=21% Similarity=0.219 Sum_probs=453.9
Q ss_pred CccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCC-ChhhhhhcccceeeccCCccccccchh
Q 002010 60 CSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRL-PSEMALLTSLKVFNISGNVFQGNFAGQ 138 (982)
Q Consensus 60 C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~~~~ 138 (982)
|+|..|.+ -..++..|||+++.+.+..|..++.+++|++|+|++|+..+.+ |..+.++++|++|+|++|.+.+..+ .
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p-~ 91 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP-D 91 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT-T
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH-h
Confidence 57888888 5578999999999999999999999999999999999877777 7889999999999999999986544 5
Q ss_pred hhhcCCCccEEeccCccccCCCchh--ccccccccEEeecCcccccccC-CCccccCcceEeeccCcccccchhhHHhhh
Q 002010 139 IVRGMTELQVLDAYNNNFTGPLPVE--IASLKSLRHLSFGGNYFTGKIP-QSYSEIQSLEYIGLNGIGLNGTVPAFLSRL 215 (982)
Q Consensus 139 ~~~~l~~L~~L~Ls~n~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l 215 (982)
.+.++++|++|+|++|++++.+|.. ++++++|++|+|++|.+++..+ ..|+++++|++|++++|.+.+..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 6789999999999999999877776 9999999999999999998766 579999999999999999999999999988
Q ss_pred --hhHHHHhhcccccccccCCCCCCCCCC------CCEEecccCcCcccCchhhcCC---Cccceeeccc---------c
Q 002010 216 --KNLREMYIGYFNTYTGGIPPGFGALTQ------LQVLDMASCNISGEIPTSLSRL---KLLHSLFLQM---------N 275 (982)
Q Consensus 216 --~~L~~L~l~~~n~~~~~~p~~~~~l~~------L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~---------N 275 (982)
++|+.|+++. |.+.+..|..++.+++ |++|++++|++++..+..+... ..++.|.++. +
T Consensus 172 ~~~~L~~L~L~~-n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 172 QGKTLSFFSLAA-NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHCSSCCCEECC-SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred cCCccceEECCC-CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8899999986 6677788887777766 9999999999998888777654 5678888773 3
Q ss_pred cCCCCCCccccCC--CCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCccccc
Q 002010 276 KLTGHIPPQLSGL--ISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFEL 353 (982)
Q Consensus 276 ~l~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 353 (982)
.+.+..+..|.++ ++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|++|++++|.+++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 4444444556655 78999999999999888999999999999999999999999999999999999999999999888
Q ss_pred CccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCC
Q 002010 354 PENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLP 433 (982)
Q Consensus 354 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 433 (982)
|..+..+++|+.|++++|++++..+..|..+++|++|++++|.+++. ..+++|+.|++++|+++ .+|.. ..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~ 401 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NL 401 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CT
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cc
Confidence 99999999999999999999988888899999999999999998743 33889999999999998 56654 45
Q ss_pred ccccccCCCccccccCCccc--ccCCccEEEeeccccCCCCch-hccCCCCcceeeecccccc-----CCCccccccccc
Q 002010 434 LLNMMELDDNLLSGELPEKM--SGASLNQLKVANNNITGKIPA-AIGNLPSLNILSLQNNRLE-----GEIPVESFNLKM 505 (982)
Q Consensus 434 ~L~~L~L~~N~l~~~~~~~~--~~~~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~ 505 (982)
.++.|++++|.+++.....+ ..++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..+..+++
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 78899999999997543322 347899999999999976554 4667899999999999997 444566889999
Q ss_pred cceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccC
Q 002010 506 ITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSY 585 (982)
Q Consensus 506 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 585 (982)
|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..| .+|+.|++++
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~ 556 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITH 556 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEE
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecC
Confidence 99999999999999999999999999999999999987777776 899999999999999999775 4789999999
Q ss_pred CccccCCCC
Q 002010 586 NNLIGNIPS 594 (982)
Q Consensus 586 N~l~~~ip~ 594 (982)
|++.+..+.
T Consensus 557 Np~~C~c~~ 565 (844)
T 3j0a_A 557 NKFICECEL 565 (844)
T ss_dssp ECCCCSSSC
T ss_pred CCccccccc
Confidence 999987763
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.3e-54 Score=521.55 Aligned_cols=511 Identities=19% Similarity=0.175 Sum_probs=451.5
Q ss_pred CCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEe
Q 002010 71 SRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLD 150 (982)
Q Consensus 71 ~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 150 (982)
.+++.|+++++.+.+..+..++.+++|++|+|++|++++..|..|.++++|++|+|++|.+++..| ..+.++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSP-GSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCT-TSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccCh-hhcCCcccCCEEE
Confidence 368899999999999888899999999999999999998889999999999999999999986544 5678999999999
Q ss_pred ccCccccCCCchhccccccccEEeecCccccc-ccCCCccccCcceEeeccCcccccchhhHHhhhhhHH----HHhhcc
Q 002010 151 AYNNNFTGPLPVEIASLKSLRHLSFGGNYFTG-KIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLR----EMYIGY 225 (982)
Q Consensus 151 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~----~L~l~~ 225 (982)
|++|++++..|..++++++|++|+|++|++++ .+|..|+++++|++|++++|.+.+..+..+..+++|+ +|+++.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998888899999999999999999986 6799999999999999999999999999999999887 588876
Q ss_pred cccccccCCCCCCCCCCCCEEecccCcCc-ccCchhhcCCCccceeecccccCCCC------CCccccCCC--CCCEEEe
Q 002010 226 FNTYTGGIPPGFGALTQLQVLDMASCNIS-GEIPTSLSRLKLLHSLFLQMNKLTGH------IPPQLSGLI--SLKSLDL 296 (982)
Q Consensus 226 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~------~~~~l~~l~--~L~~L~L 296 (982)
|.+.+..+..+.. .+|+.|++++|.++ +..|..+.+++.|+.+++..+.+.+. .+..+..+. +++.+++
T Consensus 191 -n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 191 -NPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp -CCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred -CCcceeCcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 4455444444444 49999999999997 46778899999999999876655432 222233332 4667777
Q ss_pred -eCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccc
Q 002010 297 -SLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTG 375 (982)
Q Consensus 297 -s~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 375 (982)
..|.+++.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+ +.+| .+ .+++|+.|++++|+..+
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~ 342 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSI 342 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCE
T ss_pred cccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCcc
Confidence 77889888887 999999999999999997 456 889999999999999999 5677 45 99999999999997665
Q ss_pred cCCccccCccccceeeccccccccc--CCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCC-cc
Q 002010 376 TIPRDLCKGGKLKSLILMQNFFIGP--IPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELP-EK 452 (982)
Q Consensus 376 ~~p~~~~~~~~L~~L~l~~N~~~~~--~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~ 452 (982)
.+ .+..+++|++|++++|.+++. .|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+.+..+ ..
T Consensus 343 ~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 419 (606)
T 3vq2_A 343 SF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSA 419 (606)
T ss_dssp EC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTT
T ss_pred ch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhh
Confidence 44 677899999999999999877 4889999999999999999998 477899999999999999999998877 44
Q ss_pred cc-cCCccEEEeeccccCCCCchhccCCCCcceeeeccccccC-CCccccccccccceeeeeccccCCCCCcccccccCC
Q 002010 453 MS-GASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEG-EIPVESFNLKMITSINISDNNISGEIPYSISQCHSL 530 (982)
Q Consensus 453 ~~-~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 530 (982)
+. .++|++|++++|++++..|..++.+++|++|++++|++++ .+|..+..+++|++|+|++|++++..|..|.++++|
T Consensus 420 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 499 (606)
T 3vq2_A 420 FLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL 499 (606)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC
Confidence 44 4799999999999999999999999999999999999997 478889999999999999999999999999999999
Q ss_pred CeeeCCCCcccCCCCcccccccccceEEcccccccccCcccccccc-ccceecccCCccccCCCC
Q 002010 531 TSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMM-SLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 531 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~ip~ 594 (982)
+.|+|++|++++.+|..|.++++|+.|+|++|+|+ .+|..+..++ +|++|++++|++.+..+.
T Consensus 500 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 500 QLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999999999999999999999999999 6787799997 599999999999987764
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.8e-52 Score=452.21 Aligned_cols=266 Identities=23% Similarity=0.426 Sum_probs=221.8
Q ss_pred hhcccccccccccceEEEEEEeC------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
++|...+.||+|+||+||+|++. +++.||||++.. ......++|.+|++++++++|||||+++|++.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC-CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 46888899999999999999753 477899999853 34445678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEE
Q 002010 766 LLYEYMPNGSLGEMLHGA-----------KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAH 834 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~k 834 (982)
+|||||++|+|.++++.. ....++|.++..++.||++||+|||+++ ||||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEE
Confidence 999999999999999753 2357999999999999999999999988 99999999999999999999
Q ss_pred EeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhc
Q 002010 835 VADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTT 913 (982)
Q Consensus 835 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 913 (982)
|+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||...... ++...+....
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~ 247 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGR 247 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTC
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCC
Confidence 999999987765444444445679999999999999999999999999999999999 89999875433 2333332211
Q ss_pred cCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCCCCC
Q 002010 914 SEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLIT 981 (982)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~~~~ 981 (982)
. ...|..++.++.+++.+||+.||++|||++||++.|+++.+..|.+..
T Consensus 248 ~-------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~~ld 296 (299)
T 4asz_A 248 V-------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLD 296 (299)
T ss_dssp C-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCCCSC
T ss_pred C-------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCcccc
Confidence 1 122344556899999999999999999999999999998887776653
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-51 Score=489.33 Aligned_cols=518 Identities=17% Similarity=0.152 Sum_probs=411.8
Q ss_pred cCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhcc
Q 002010 86 SIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIA 165 (982)
Q Consensus 86 ~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~ 165 (982)
.+|..+. ++++.|+|++|++++..+..+..+++|++|+|++|.+++ ++...+.++++|++|+|++|++++..|..|+
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFS 97 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc-cCcccccCchhCCEEeCcCCcCCccCHhhhc
Confidence 4565443 578899999999988778889999999999999998875 4455678889999999999999877778899
Q ss_pred ccccccEEeecCcccccccCCCccccCcceEeeccCccccc-chhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCC-
Q 002010 166 SLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNG-TVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQL- 243 (982)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~-~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L- 243 (982)
++++|++|++++|++++..+..|+++++|++|++++|.+.+ .+|..++++++|++|++++ |.+.+..|..++.+++|
T Consensus 98 ~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~ 176 (570)
T 2z63_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS-NKIQSIYCTDLRVLHQMP 176 (570)
T ss_dssp TCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTT-SCCCEECGGGGHHHHTCT
T ss_pred CccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcC-CccceecHHHccchhccc
Confidence 99999999999999987776678899999999999888876 4566677776666666664 34444455556666666
Q ss_pred ---CEEecccCcCcccCchhhcCCCccceeecccccCCC-CCCccccCCCCCCEEEeeCCccc------CcCchhhhccc
Q 002010 244 ---QVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTG-HIPPQLSGLISLKSLDLSLNYLT------GEIPESFAALK 313 (982)
Q Consensus 244 ---~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~------~~~~~~l~~l~ 313 (982)
+.|++++|.+++..|..+..+ +|++|++++|.... .++..+..+++++.+.+..+.+. ......+..+.
T Consensus 177 ~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~ 255 (570)
T 2z63_A 177 LLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 255 (570)
T ss_dssp TCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGG
T ss_pred hhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccc
Confidence 677777777776666666554 67777777764432 23444556666666555433221 11222333333
Q ss_pred --chhhhhhccC-CCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCcccccee
Q 002010 314 --NLTLLQLFKN-NLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSL 390 (982)
Q Consensus 314 --~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L 390 (982)
.++.+++++| .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|
T Consensus 256 ~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L 330 (570)
T 2z63_A 256 NLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRL 330 (570)
T ss_dssp GSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEE
T ss_pred ccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEE
Confidence 3466677777 777888999999999999999999998 578888888 9999999999998 6665 478899999
Q ss_pred ecccccccccCCccccCCCCCCEEEccCCccCCCC--CccccCCCccccccCCCccccccCCcccccCCccEEEeecccc
Q 002010 391 ILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTI--PAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNI 468 (982)
Q Consensus 391 ~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i 468 (982)
++++|.+.+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.+..+......+|++|++++|++
T Consensus 331 ~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l 408 (570)
T 2z63_A 331 TFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNL 408 (570)
T ss_dssp EEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEE
T ss_pred eCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCcc
Confidence 9999998877665 78999999999999998654 6788899999999999999998766643457899999999999
Q ss_pred CCCCc-hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccC-CCCCcccccccCCCeeeCCCCcccCCCCc
Q 002010 469 TGKIP-AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNIS-GEIPYSISQCHSLTSVDLSRNSLYGKIPP 546 (982)
Q Consensus 469 ~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 546 (982)
++..| ..+..+++|++|++++|++++..|..+..+++|++|++++|+++ +.+|..+..+++|+.|+|++|++++..|.
T Consensus 409 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 488 (570)
T 2z63_A 409 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488 (570)
T ss_dssp ESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred ccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChh
Confidence 98766 57899999999999999999889999999999999999999998 57899999999999999999999998899
Q ss_pred ccccccccceEEcccccccccCccccccccccceecccCCccccCCCCCcc---ccccccccccCCcCcccCC
Q 002010 547 GISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQ---FLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 547 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~---~~~~~~~~~~~n~~~c~~~ 616 (982)
.|.++++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|.... |..-....+.+.+ .|..+
T Consensus 489 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred hhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 999999999999999999998888899999999999999999999986532 2222334455555 66544
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1e-51 Score=448.26 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=218.3
Q ss_pred hhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
..++..+.||+|+||+||+|.+ .+++.||||++.........++|.+|+.++++++|||||+++|++.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4567778899999999999975 2467899999976666666788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC
Q 002010 766 LLYEYMPNGSLGEMLHGAK--------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF 831 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~ 831 (982)
+|||||++|+|.+++.... ...+++.++.+++.|||+||+|||+++ ||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence 9999999999999996432 246899999999999999999999988 99999999999999999
Q ss_pred CEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHH
Q 002010 832 EAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVR 910 (982)
Q Consensus 832 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 910 (982)
++||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |..||.+... .++...+.
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-~~~~~~i~ 261 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVVEMIR 261 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-HHHHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH
Confidence 999999999987765544444556789999999999999999999999999999999999 8999987543 23333332
Q ss_pred HhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 911 KTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
.... ...|.+++..+.++|.+||+.||++||||+||++.|+...
T Consensus 262 ~~~~-------------------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 262 NRQV-------------------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cCCC-------------------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2111 1234455668999999999999999999999999998753
No 16
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-51 Score=444.66 Aligned_cols=265 Identities=30% Similarity=0.442 Sum_probs=212.7
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
++++..+.||+|+||+||+|++.+ .||||+++... .....+.|.+|+.++++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 567788899999999999998743 69999985433 22345679999999999999999999998754 668999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
|++|+|.++++. ...++++.++..++.||++||+|||+++ ||||||||+|||+++++++||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999974 3467999999999999999999999988 999999999999999999999999999876544444
Q ss_pred cccccccccccccccccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 851 ECMSSVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.......||+.|||||++.+ ..|+.++|||||||++|||+||+.||............+.....
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~------------- 255 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA------------- 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCC-------------
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC-------------
Confidence 44556789999999999864 45899999999999999999999999876554444444333221
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCC
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPS 978 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~ 978 (982)
.|.....+.+++..+.+++.+||+.||++||||+||++.|+.+..+.|.
T Consensus 256 --~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 256 --SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp --CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred --CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 2233344556677899999999999999999999999999877666553
No 17
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=452.42 Aligned_cols=265 Identities=24% Similarity=0.399 Sum_probs=210.9
Q ss_pred hhcccccccccccceEEEEEEeC------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
++|...+.||+|+||+||+|++. +++.||||++.. ......++|.+|++++++++|||||+++|++.+++..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45677789999999999999753 478899999853 34445678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC
Q 002010 766 LLYEYMPNGSLGEMLHGAK-------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE 832 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~ 832 (982)
+|||||++|+|.++++... ..+++|.++..++.||++||+|||+.+ ||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCc
Confidence 9999999999999997532 246999999999999999999999988 999999999999999999
Q ss_pred EEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHH
Q 002010 833 AHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRK 911 (982)
Q Consensus 833 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 911 (982)
+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||......+ ....+..
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-~~~~i~~ 275 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCITQ 275 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-HHHHHHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-HHHHHHc
Confidence 99999999997765444444456789999999999999999999999999999999999 899998754332 2333322
Q ss_pred hccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCCCC
Q 002010 912 TTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLI 980 (982)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~~~ 980 (982)
... ...|..++.++.+++.+||+.||++|||++||++.|+.+.+.-|.+.
T Consensus 276 g~~-------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~~l 325 (329)
T 4aoj_A 276 GRE-------------------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYL 325 (329)
T ss_dssp TCC-------------------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC---
T ss_pred CCC-------------------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCcccc
Confidence 111 12233455689999999999999999999999999999887766554
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.8e-51 Score=487.12 Aligned_cols=493 Identities=18% Similarity=0.201 Sum_probs=340.1
Q ss_pred CCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchh
Q 002010 59 HCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQ 138 (982)
Q Consensus 59 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~ 138 (982)
.|.|.|| |+..+ +++ ..+|+.+. ++|++|+|++|++++..|..+.++++|++|+|++|.+.+.. ..
T Consensus 3 ~C~~~~~-c~~~~---------~~l-~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGRS---------RSF-TSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE-GD 68 (549)
T ss_dssp EECTTSE-EECTT---------SCC-SSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEEC-TT
T ss_pred cCCCCce-EECCC---------Ccc-ccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccC-hh
Confidence 5999999 97432 222 36777664 78999999999999888999999999999999999998644 45
Q ss_pred hhhcCCCccEEeccCccccCCCchhccccccccEEeecCccccc-ccCCCccccCcceEeeccCcccccchh-hHHhhhh
Q 002010 139 IVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTG-KIPQSYSEIQSLEYIGLNGIGLNGTVP-AFLSRLK 216 (982)
Q Consensus 139 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~i~~~~~-~~l~~l~ 216 (982)
.+.++++|++|+|++|++++..|..++++++|++|+|++|++++ ..|..++++++|++|++++|.+.+.+| ..+.+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 67889999999999999998888889999999999999999987 467889999999999999987443333 4566666
Q ss_pred hHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCC--C-ccccCCCCCCE
Q 002010 217 NLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHI--P-PQLSGLISLKS 293 (982)
Q Consensus 217 ~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~-~~l~~l~~L~~ 293 (982)
+|++|++++ |.+.+.+|..++.+++|++|+++.|.+.......+..+++|++|++++|++++.. + .....+++|+.
T Consensus 149 ~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKA-LSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEE-TTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccC-CcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 666666654 4455555666666666666666666655322222345666666666666666431 1 11233455666
Q ss_pred EEeeCCcccCcCchhh----hcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEec
Q 002010 294 LDLSLNYLTGEIPESF----AALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVT 369 (982)
Q Consensus 294 L~Ls~N~l~~~~~~~l----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 369 (982)
|++++|.+++..+..+ ..+++|+.+++++|.+.+...-. ......+..+.+|+.|++.
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~------------------~~~~~~~~~l~~L~~L~l~ 289 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN------------------PSESDVVSELGKVETVTIR 289 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC------------------CCTTTCCCCCTTCCEEEEE
T ss_pred eeccccccchhHHHHHHHHhhhhcccccccccccccccccccc------------------ccchhhhhhhccccccccc
Confidence 6666666554333222 33445555555555544321000 0001122333444444444
Q ss_pred ccccccc-----CCccccCccccceeecccccccccCCccc-cCCCCCCEEEccCCccCCCCC---ccccCCCccccccC
Q 002010 370 SNHLTGT-----IPRDLCKGGKLKSLILMQNFFIGPIPEEL-GQCKSLTKIRFSKNYLNGTIP---AGLFNLPLLNMMEL 440 (982)
Q Consensus 370 ~N~l~~~-----~p~~~~~~~~L~~L~l~~N~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L 440 (982)
++.+... ++..+....+|+.|++++|.+. .+|..+ ..+++|++|++++|++++.+| ..+..+++|++|++
T Consensus 290 ~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp SCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred ccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 4443321 1111222345666666666654 344443 456666666666666665543 23556666667777
Q ss_pred CCccccccCC--ccc-ccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccC
Q 002010 441 DDNLLSGELP--EKM-SGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNIS 517 (982)
Q Consensus 441 ~~N~l~~~~~--~~~-~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 517 (982)
++|++++..+ ..+ ...+|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+ .++|++|+|++|+|+
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD 444 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCS
T ss_pred cCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChh
Confidence 7776665432 122 2367888888888888 67888888999999999999997 455444 368999999999999
Q ss_pred CCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCCC
Q 002010 518 GEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG 595 (982)
Q Consensus 518 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 595 (982)
+.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..+..+++|+.|++++|++++.+|..
T Consensus 445 ~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 445 SFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp CCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred hhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 753 57899999999999998 6776 578999999999999999989989999999999999999999988843
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.2e-51 Score=490.91 Aligned_cols=467 Identities=21% Similarity=0.286 Sum_probs=317.0
Q ss_pred cccceeeccCCccccccchhhhhcCCCccEEeccCccc------cC------CCchhccccccccEEeecCcccccccCC
Q 002010 119 TSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNF------TG------PLPVEIASLKSLRHLSFGGNYFTGKIPQ 186 (982)
Q Consensus 119 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l------~~------~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 186 (982)
.+++.|+|++|.+.|.+|. .+.++++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~ 156 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRE 156 (636)
T ss_dssp CCEEEEECTTSCCEEEECG-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGG
T ss_pred CCEEEEEecCcccCCcCCh-HHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchh
Confidence 3567777777777777664 456777777777777765 22 334333 45555 66666666666665
Q ss_pred Cccc-cCcceEeeccCcccccchhhHHhhhhhHHHHhhcc-cccccccCCCCCCCCCCCCEEecccCcCccc--------
Q 002010 187 SYSE-IQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGY-FNTYTGGIPPGFGALTQLQVLDMASCNISGE-------- 256 (982)
Q Consensus 187 ~~~~-l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~-~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-------- 256 (982)
.++. +..+..+++....+.. .....++.++++. +|.+++ +|..|+++++|++|+|++|++++.
T Consensus 157 ~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 157 DFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp GSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred hHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 5542 2223333332222110 1111233333333 456666 777777777777777777777764
Q ss_pred ---------Cchhhc--CCCccceeecccccCCCCCCccccCCCCCCEEEeeCCc-ccC-cCchhhhcc------cchhh
Q 002010 257 ---------IPTSLS--RLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNY-LTG-EIPESFAAL------KNLTL 317 (982)
Q Consensus 257 ---------~~~~l~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l------~~L~~ 317 (982)
+|..++ ++++|++|+|++|++.+.+|..++++++|++|+|++|+ +++ .+|..+..+ ++|++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 677766 77777777777777777777777777777777777776 776 667666665 66666
Q ss_pred hhhccCCCCCCCCC--cCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccc-cceeeccc
Q 002010 318 LQLFKNNLRGPIPS--FLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGK-LKSLILMQ 394 (982)
Q Consensus 318 L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-L~~L~l~~ 394 (982)
|++++|+++ .+|. .++.+++|++|++++|.+++.+| .++.+++|++|++++|+++ .+|..+..+++ |++|++++
T Consensus 310 L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~ 386 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAH 386 (636)
T ss_dssp EECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCS
T ss_pred EECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccC
Confidence 666666666 5666 66666666666666666666666 6666666666666666666 55555666655 66666666
Q ss_pred ccccccCCccccCCC--CCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCC
Q 002010 395 NFFIGPIPEELGQCK--SLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKI 472 (982)
Q Consensus 395 N~~~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~ 472 (982)
|.++ .+|..+..++ +|++|++++|++++.+|..+.... ...+...+|++|++++|++++..
T Consensus 387 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~----------------~~~~~~~~L~~L~Ls~N~l~~lp 449 (636)
T 4eco_A 387 NKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLD----------------PTPFKGINVSSINLSNNQISKFP 449 (636)
T ss_dssp SCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTC----------------SSCCCCCCEEEEECCSSCCCSCC
T ss_pred CcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccc----------------cccccCCCCCEEECcCCccCcCC
Confidence 6655 4555554433 556666666666555555444100 01112246788888888888555
Q ss_pred chhccCCCCcceeeeccccccCCCccccccc--------cccceeeeeccccCCCCCcccc--cccCCCeeeCCCCcccC
Q 002010 473 PAAIGNLPSLNILSLQNNRLEGEIPVESFNL--------KMITSINISDNNISGEIPYSIS--QCHSLTSVDLSRNSLYG 542 (982)
Q Consensus 473 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~ 542 (982)
+..+..+++|++|+|++|+++ .+|...... ++|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|++
T Consensus 450 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 450 KELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp THHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred HHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 555667889999999999988 666655442 28999999999999 6788876 89999999999999987
Q ss_pred CCCcccccccccceEEc------ccccccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 543 KIPPGISKLIDLSILNL------SRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 543 ~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
+|..+.++++|+.|+| ++|++.+.+|..+..+++|+.|+|++|++ +.+|... +.++....+.+||+.|...
T Consensus 528 -ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 528 -FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp -CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCEEEC
T ss_pred -cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCccccH
Confidence 8889999999999999 56889999999999999999999999999 7888653 3788888899999999665
Q ss_pred CCCCc
Q 002010 617 NGTCQ 621 (982)
Q Consensus 617 ~~~c~ 621 (982)
...|+
T Consensus 605 ~~~~~ 609 (636)
T 4eco_A 605 SYVCP 609 (636)
T ss_dssp TTTHH
T ss_pred Hhcch
Confidence 44443
No 20
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-50 Score=441.94 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=206.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|++.+.||+|+||+||+|+. .+|+.||||++..... ....+.+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5799999999999999999965 5699999999965432 2345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
||+||+|.+++...+...+++.+++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998767778899999999999999999999998 999999999999999999999999999876532
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......+||+.|||||++.+..|+.++||||+||++|||+||++||........+..+.....
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~---------------- 242 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF---------------- 242 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC----------------
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC----------------
Confidence 1223456899999999999999999999999999999999999999976433322222222111
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
+..+...+.++.+|+.+||++||++|||++|+++
T Consensus 243 ----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 ----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1122233457899999999999999999999975
No 21
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-50 Score=432.94 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=211.3
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.. .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5699999999999999999965 579999999985432 2345667899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||++||+|.+++. +.+.+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997 3468999999999999999999999998 9999999999999999999999999999876554
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........+||+.|||||++.+..|+.++||||+||++|||++|++||...........+... ..
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~-~~-------------- 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-EY-------------- 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CC--------------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CC--------------
Confidence 445556789999999999999999999999999999999999999999764333222222221 11
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHH
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREV 965 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~el 965 (982)
.+|...+.++.+|+.+||++||++|||++|+
T Consensus 252 ------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 252 ------DFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred ------CCCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 1122233468899999999999999999986
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-49 Score=434.25 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=209.9
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
+.|+..+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+.++++++|||||++++++.+++..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGG-GCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecC-chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 5688889999999999999965 56999999998543 334456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
|+||+|.+++.. .++++.++..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+... .
T Consensus 153 ~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--~ 224 (346)
T 4fih_A 153 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--V 224 (346)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS--S
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCC--C
Confidence 999999999964 46999999999999999999999998 999999999999999999999999999876543 2
Q ss_pred ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 851 ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......+||+.|||||++.+..|+.++||||+||++|||++|++||..... ......+......
T Consensus 225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~~~~~--------------- 288 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LKAMKMIRDNLPP--------------- 288 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSSCC---------------
T ss_pred CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHcCCCC---------------
Confidence 234567899999999999999999999999999999999999999976433 2223333221110
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.+ ..+...+.++.+|+.+||++||++|||++|+++
T Consensus 289 -~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 289 -RL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -CC-SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CC-CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 112233457899999999999999999999987
No 23
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-49 Score=432.01 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=208.0
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.+.|+..+.||+|+||+||+|+. .+|+.||||++..... ..+|+.++++++|||||++++++.+++..|+|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45688888999999999999975 5699999999854321 2479999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC-CEEEeccccchhccccC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF-EAHVADFGLAKFLQDAG 848 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~ 848 (982)
||+||+|.++++. .+.+++.++..++.||+.||+|||+++ ||||||||+|||++.+| ++||+|||+|+.+....
T Consensus 131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999999973 467999999999999999999999988 99999999999999987 69999999998776432
Q ss_pred Ccc---cccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 849 ASE---CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 849 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
... .....+||+.|||||++.+..|+.++||||+||++|||+||++||...........+......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~----------- 274 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP----------- 274 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG-----------
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCC-----------
Confidence 221 223467999999999999999999999999999999999999999876554444443322111
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLAN 971 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~ 971 (982)
....+...+..+.+++.+||++||++|||++|+++.|..
T Consensus 275 -------~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 275 -------IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -------GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 112334455678999999999999999999999887643
No 24
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-49 Score=439.65 Aligned_cols=263 Identities=27% Similarity=0.390 Sum_probs=220.4
Q ss_pred HhhcccccccccccceEEEEEEeCC------CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCC-CcccceEeEEEcC-C
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPD------GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRH-RNIVRLLGYVSNR-D 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~-~ 762 (982)
.++|+..+.||+|+||+||+|.+.. ++.||||++.........+.|.+|+.++.+++| ||||+++|+|.++ .
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 4679999999999999999996532 357999999665555556789999999999975 8999999998764 5
Q ss_pred ccEEEEeccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAK--------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD 828 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~ 828 (982)
..++|||||++|+|.++++..+ ...+++.++..++.|||+||+|||+++ ||||||||+|||++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS 219 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeC
Confidence 6899999999999999997532 245899999999999999999999988 99999999999999
Q ss_pred CCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHH
Q 002010 829 SDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVR 907 (982)
Q Consensus 829 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 907 (982)
+++++||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||........+..
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~ 299 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999997765444444556789999999999999999999999999999999998 9999987665555555
Q ss_pred HHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 908 WVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
.+..... . ..|..++.++.++|.+||+.||++|||++||++.|+.+.+.
T Consensus 300 ~i~~g~~-~------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 300 RLKEGTR-M------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHTCC-C------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCC-C------------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 5544322 1 12333455789999999999999999999999999876553
No 25
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5e-49 Score=482.32 Aligned_cols=474 Identities=20% Similarity=0.249 Sum_probs=332.6
Q ss_pred ccccEEEeccCCCCCCCChhhhhhcccceeec-cCCccccccchhhhhc---CCC-----ccE------Ee-ccCccccC
Q 002010 95 TKLVNLTISNVNLTGRLPSEMALLTSLKVFNI-SGNVFQGNFAGQIVRG---MTE-----LQV------LD-AYNNNFTG 158 (982)
Q Consensus 95 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L-s~n~l~~~~~~~~~~~---l~~-----L~~------L~-Ls~n~l~~ 158 (982)
.+++.|+|++|++.|.+|+++++|++|++|+| ++|.+.|..+...... +.. ++. ++ .....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999887633211000 000 000 00 00011111
Q ss_pred C-----------CchhccccccccEEeecC--cccccccCCCccccCcceEeeccCccccc-chhhHHhhhhhHHHHhhc
Q 002010 159 P-----------LPVEIASLKSLRHLSFGG--NYFTGKIPQSYSEIQSLEYIGLNGIGLNG-TVPAFLSRLKNLREMYIG 224 (982)
Q Consensus 159 ~-----------~p~~l~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~n~i~~-~~~~~l~~l~~L~~L~l~ 224 (982)
. .+........++.+.++. |++++ +|..|+++++|++|+|++|.+.+ .++..+..+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~--------- 472 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDA--------- 472 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT---------
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccc---------
Confidence 1 111112334556666655 89998 99999999999999999999987 222211110
Q ss_pred ccccccccCCCCCC--CCCCCCEEecccCcCcccCchhhcCCCccceeeccccc-CCC-CCCccccCCC-------CCCE
Q 002010 225 YFNTYTGGIPPGFG--ALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNK-LTG-HIPPQLSGLI-------SLKS 293 (982)
Q Consensus 225 ~~n~~~~~~p~~~~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~l~~l~-------~L~~ 293 (982)
..+...+.+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++
T Consensus 473 s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~ 552 (876)
T 4ecn_A 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552 (876)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCE
T ss_pred ccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccE
Confidence 01344566888877 88888888888888888888888888888888888887 777 6776555444 7888
Q ss_pred EEeeCCcccCcCch--hhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCc-ccEEEecc
Q 002010 294 LDLSLNYLTGEIPE--SFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGK-LLILDVTS 370 (982)
Q Consensus 294 L~Ls~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~ 370 (982)
|+|++|+++ .+|. .|..+++|+.|+|++|+++ .+| .|+.+++|+.|++++|.++ .+|..+..+++ |+.|+|++
T Consensus 553 L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 553 FYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSH 628 (876)
T ss_dssp EECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCS
T ss_pred EEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcC
Confidence 888888877 6666 7777777777777777777 666 6777777777777777777 66666777766 77777777
Q ss_pred ccccccCCccccCccc--cceeecccccccccCCccc---c--CCCCCCEEEccCCccCCCCCcccc-CCCccccccCCC
Q 002010 371 NHLTGTIPRDLCKGGK--LKSLILMQNFFIGPIPEEL---G--QCKSLTKIRFSKNYLNGTIPAGLF-NLPLLNMMELDD 442 (982)
Q Consensus 371 N~l~~~~p~~~~~~~~--L~~L~l~~N~~~~~~~~~l---~--~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~ 442 (982)
|+++ .+|..+..+.. |+.|++++|.+.+.+|... . .+++|+.|+|++|+++ .+|..+. .++
T Consensus 629 N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~--------- 697 (876)
T 4ecn_A 629 NKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGS--------- 697 (876)
T ss_dssp SCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTC---------
T ss_pred CCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCC---------
Confidence 7776 56665555433 6666666666655444221 1 2235555555555555 3333332 344
Q ss_pred ccccccCCcccccCCccEEEeeccccCCCCchhc--------cCCCCcceeeeccccccCCCccccc--cccccceeeee
Q 002010 443 NLLSGELPEKMSGASLNQLKVANNNITGKIPAAI--------GNLPSLNILSLQNNRLEGEIPVESF--NLKMITSINIS 512 (982)
Q Consensus 443 N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls 512 (982)
+|+.|+|++|+|+ .+|..+ .++++|+.|+|++|+|+ .+|..+. .+++|+.|+|+
T Consensus 698 --------------~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls 761 (876)
T 4ecn_A 698 --------------PISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVS 761 (876)
T ss_dssp --------------CCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECC
T ss_pred --------------CCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeC
Confidence 4555555555555 333332 23459999999999999 7898887 99999999999
Q ss_pred ccccCCCCCcccccccCCCeeeCCC------CcccCCCCcccccccccceEEcccccccccCccccccccccceecccCC
Q 002010 513 DNNISGEIPYSISQCHSLTSVDLSR------NSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYN 586 (982)
Q Consensus 513 ~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 586 (982)
+|+|++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|
T Consensus 762 ~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N 837 (876)
T 4ecn_A 762 YNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADN 837 (876)
T ss_dssp SSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSC
T ss_pred CCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCC
Confidence 999997 799999999999999977 889999999999999999999999999 68898766 69999999999
Q ss_pred ccccCCCCCc-cccccccccccCCcCcc
Q 002010 587 NLIGNIPSGG-QFLAFNETSFIGNPNLC 613 (982)
Q Consensus 587 ~l~~~ip~~~-~~~~~~~~~~~~n~~~c 613 (982)
++...-+... .........+.+|+..|
T Consensus 838 ~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 838 PNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp TTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred CCCccChHHccccccchheeecCCCccc
Confidence 9876544321 11223344456666555
No 26
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.8e-49 Score=420.28 Aligned_cols=248 Identities=27% Similarity=0.442 Sum_probs=200.7
Q ss_pred cccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEc----CCccEEE
Q 002010 694 LKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN----RDTNLLL 767 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 767 (982)
|+..+.||+|+||+||+|.. .+++.||+|++.... .....+.|.+|+.++++++|||||++++++.+ +...|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 35667899999999999965 568999999985543 23345678999999999999999999999865 3457999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC-CCCEEEeccccchhccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS-DFEAHVADFGLAKFLQD 846 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~~~~ 846 (982)
||||++|+|.+++. +...+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999997 3467999999999999999999999864 45999999999999984 79999999999986432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
......+||+.|||||++.+ .|+.++||||+||++|||+||++||........+...+.......
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~---------- 249 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA---------- 249 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----------
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC----------
Confidence 23345789999999998865 699999999999999999999999976544433333332211100
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+.++.+++.+||++||++|||++|+++
T Consensus 250 --------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 250 --------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011122346889999999999999999999975
No 27
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-48 Score=465.18 Aligned_cols=483 Identities=19% Similarity=0.175 Sum_probs=408.7
Q ss_pred cceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeecc
Q 002010 121 LKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLN 200 (982)
Q Consensus 121 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 200 (982)
.++.+-++..++. +|..+ .+++++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 9 ~~~~~c~~~~l~~-ip~~l---~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 9 NITYQCMELNFYK-IPDNL---PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TTEEECCSSCCSS-CCSSS---CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEeCCCCccc-cCCCc---cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCc
Confidence 3456666666653 44322 3579999999999998888899999999999999999998888999999999999999
Q ss_pred CcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcc-cCchhhcCCCccceeecccccCCC
Q 002010 201 GIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISG-EIPTSLSRLKLLHSLFLQMNKLTG 279 (982)
Q Consensus 201 ~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~ 279 (982)
+|.+.+..|..|.++++|++|++++ |.+.+..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~ 163 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVE-TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTT-SCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE
T ss_pred CCcCCccCHhhhcCccccccccccc-cccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce
Confidence 9999988888999999999999986 44554444468899999999999999987 468889999999999999999998
Q ss_pred CCCccccCCCCC----CEEEeeCCcccCcCchhhhcccchhhhhhccCCCCC----------------------------
Q 002010 280 HIPPQLSGLISL----KSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRG---------------------------- 327 (982)
Q Consensus 280 ~~~~~l~~l~~L----~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~---------------------------- 327 (982)
..+..++.+++| +.|++++|.+++..|..+..+ +|+.|++++|....
T Consensus 164 ~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 242 (570)
T 2z63_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242 (570)
T ss_dssp ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS
T ss_pred ecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchh
Confidence 777888888888 889999999998888777765 78889888874321
Q ss_pred ---CCCCcCCCCC--CccEEEccCC-CcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccC
Q 002010 328 ---PIPSFLGDFP--NLEVLQVWGN-NFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPI 401 (982)
Q Consensus 328 ---~~p~~~~~l~--~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~ 401 (982)
.....+..++ .++.+++++| .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+
T Consensus 243 l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l 319 (570)
T 2z63_A 243 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QF 319 (570)
T ss_dssp CEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SC
T ss_pred hhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-cc
Confidence 1111222222 2456677776 677778889999999999999999998 688888888 9999999999988 55
Q ss_pred CccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccC--Cccc-ccCCccEEEeeccccCCCCchhccC
Q 002010 402 PEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGEL--PEKM-SGASLNQLKVANNNITGKIPAAIGN 478 (982)
Q Consensus 402 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~-~~~~L~~L~L~~N~i~~~~p~~~~~ 478 (982)
|. ..+++|++|++++|.+.+..+. ..+++|++|++++|.+++.. +..+ ...+|++|++++|++++..+. +..
T Consensus 320 ~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~ 394 (570)
T 2z63_A 320 PT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLG 394 (570)
T ss_dssp CB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EET
T ss_pred Cc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccc
Confidence 54 5789999999999999877665 78899999999999998764 3333 347899999999999966555 999
Q ss_pred CCCcceeeeccccccCCCc-cccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCccc-CCCCcccccccccce
Q 002010 479 LPSLNILSLQNNRLEGEIP-VESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLY-GKIPPGISKLIDLSI 556 (982)
Q Consensus 479 l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 556 (982)
+++|++|++++|++++..| ..+..+++|++|++++|++++..|..|.++++|+.|+|++|.++ +.+|..+..+++|++
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 9999999999999997766 46889999999999999999999999999999999999999998 679999999999999
Q ss_pred EEcccccccccCccccccccccceecccCCccccCCCCC-ccccccccccccCCcCcccCCC
Q 002010 557 LNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG-GQFLAFNETSFIGNPNLCLLRN 617 (982)
Q Consensus 557 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~~~~~~~~~~~~n~~~c~~~~ 617 (982)
|+|++|++++..|..+..+++|++|++++|++++.+|.. ..+..+....+.+||+.|.++.
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999998999999999999999999999988763 4567888889999999997653
No 28
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=435.66 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=210.6
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.+.|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+|++++|||||+++++|.+++..|+|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST-TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc-chhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 35799999999999999999965 56999999998543 34456678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
||+||+|.+++.. ..+++.++..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 229 y~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-- 300 (423)
T 4fie_A 229 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-- 300 (423)
T ss_dssp CCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSS--
T ss_pred CCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCC--
Confidence 9999999999963 46999999999999999999999998 999999999999999999999999999876543
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......+||+.|||||++.+..|+.++||||+||++|||++|++||...... .....+......
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~-------------- 365 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPP-------------- 365 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCC--------------
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCC--------------
Confidence 22345678999999999999999999999999999999999999999764332 223333222110
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.+ ..+...+..+.+|+.+||++||++|||++|+++
T Consensus 366 --~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 --RL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --CC-SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 111223457889999999999999999999987
No 29
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-48 Score=414.45 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=192.8
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... .......+.+|+.++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999975 569999999986543 233456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+ +|+|.+++.. ..++++.++..++.||+.|++|||+++ |+||||||+||++++++.+||+|||+|+...+.
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 9999 6899999973 468999999999999999999999998 999999999999999999999999999876533
Q ss_pred CCcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
......+||+.|||||++.+..| +.++||||+||++|||+||+.||...... ...+.+.....
T Consensus 166 ---~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~~------------ 229 (275)
T 3hyh_A 166 ---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVY------------ 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC------------
T ss_pred ---CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCC------------
Confidence 23345789999999999998886 58999999999999999999999764322 22222221111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..|...+.++.+++.+||+.||++|||++|+++
T Consensus 230 --------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 --------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 112223457889999999999999999999987
No 30
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.2e-48 Score=462.41 Aligned_cols=478 Identities=20% Similarity=0.203 Sum_probs=363.1
Q ss_pred EEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcc
Q 002010 100 LTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNY 179 (982)
Q Consensus 100 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 179 (982)
.+.++++++ .+|..+. ++|++|+|++|.+++..+ ..+.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 456666666 4554433 456666666665553322 234455555555555555555555555555555555555555
Q ss_pred cccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccC-c
Q 002010 180 FTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEI-P 258 (982)
Q Consensus 180 l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~ 258 (982)
+++..|..|+++++|++|++++|.+. ...+|..++++++|++|++++|.+.+.+ +
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~------------------------~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQ------------------------TLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCS------------------------SSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCccc------------------------ccchhhhhhccCCccEEECCCCccccccCH
Confidence 55554444555555555555554443 1145677899999999999999854444 4
Q ss_pred hhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCC---CCcCCC
Q 002010 259 TSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPI---PSFLGD 335 (982)
Q Consensus 259 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~---p~~~~~ 335 (982)
..|.++++|++|++++|++++..|..+..+++|++|++++|.+.......+..+++|++|++++|++++.. ......
T Consensus 142 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 221 (549)
T 2z81_A 142 IDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEV 221 (549)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCC
T ss_pred hhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhh
Confidence 68999999999999999999989999999999999999999987443333467899999999999998752 223456
Q ss_pred CCCccEEEccCCCcccccC----ccccCCCcccEEEeccccccccC------CccccCccccceeeccccccccc-----
Q 002010 336 FPNLEVLQVWGNNFTFELP----ENLGRNGKLLILDVTSNHLTGTI------PRDLCKGGKLKSLILMQNFFIGP----- 400 (982)
Q Consensus 336 l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~------p~~~~~~~~L~~L~l~~N~~~~~----- 400 (982)
+++|+.|++++|.+++..+ ..+..+.+|+.+++++|.+.+.. ...+..+++|+.|.+.++.+...
T Consensus 222 ~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~ 301 (549)
T 2z81_A 222 SSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYD 301 (549)
T ss_dssp CCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCC
T ss_pred hhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhccc
Confidence 8899999999999986544 34567789999999999988642 23456778999999999876532
Q ss_pred CCccccCCCCCCEEEccCCccCCCCCccc-cCCCccccccCCCccccccCCcc---c-ccCCccEEEeeccccCCCCc--
Q 002010 401 IPEELGQCKSLTKIRFSKNYLNGTIPAGL-FNLPLLNMMELDDNLLSGELPEK---M-SGASLNQLKVANNNITGKIP-- 473 (982)
Q Consensus 401 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~---~-~~~~L~~L~L~~N~i~~~~p-- 473 (982)
++..+....+|+.|++++|+++ .+|..+ ..+++|++|++++|.+++.+|.. + ..++|++|++++|++++..+
T Consensus 302 l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 380 (549)
T 2z81_A 302 LSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTG 380 (549)
T ss_dssp CCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHH
T ss_pred chhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccch
Confidence 2222344678999999999998 778776 47999999999999999876432 2 23789999999999996543
Q ss_pred hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccc
Q 002010 474 AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLID 553 (982)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 553 (982)
..+..+++|++|++++|+++ .+|..+..+++|++|++++|+|+ .+|..+ .++|+.|+|++|+|++.+ ..+++
T Consensus 381 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~ 452 (549)
T 2z81_A 381 EILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPR 452 (549)
T ss_dssp HHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTT
T ss_pred hhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCCh
Confidence 56899999999999999999 78989999999999999999998 445444 268999999999999753 57899
Q ss_pred cceEEcccccccccCccccccccccceecccCCccccCCCC-CccccccccccccCCcCcccCC
Q 002010 554 LSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS-GGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 554 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~-~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|. ...+..+....+.+||+.|+++
T Consensus 453 L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 453 LQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred hcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999999999 6776 57899999999999999998886 3466778888999999998653
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.8e-48 Score=458.40 Aligned_cols=453 Identities=18% Similarity=0.197 Sum_probs=365.1
Q ss_pred cEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecC
Q 002010 98 VNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGG 177 (982)
Q Consensus 98 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 177 (982)
++|++++|+++ .+|..+. ++|++|+|++|.+++. +...+.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISEL-WTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCC-CHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCccccc-ChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57899999998 5777665 8899999999988754 345677889999999999999887788899999999999999
Q ss_pred cccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccC
Q 002010 178 NYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEI 257 (982)
Q Consensus 178 N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 257 (982)
|+++ .+|.. .+++|++|++++|.+.+. .+|..|+++++|++|++++|++++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~------------------------~~p~~~~~l~~L~~L~L~~n~l~~-- 129 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDAL------------------------PICKEFGNMSQLKFLGLSTTHLEK-- 129 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSC------------------------CCCGGGGGCTTCCEEEEEESSCCG--
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccc------------------------cchhhhccCCcceEEEecCcccch--
Confidence 9988 56655 788888888888776521 345677888899999999999986
Q ss_pred chhhcCCCcc--ceeecccccC--CCCCCccccCCC-CCCEEEeeCCcccCcCc-hhhhcccchhhhhhccCC-------
Q 002010 258 PTSLSRLKLL--HSLFLQMNKL--TGHIPPQLSGLI-SLKSLDLSLNYLTGEIP-ESFAALKNLTLLQLFKNN------- 324 (982)
Q Consensus 258 ~~~l~~l~~L--~~L~L~~N~l--~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~------- 324 (982)
..+..+++| ++|++++|++ .+..|..+..+. +...+++++|.+.+.++ ..+..+++|+.|++++|.
T Consensus 130 -~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 130 -SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp -GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH
T ss_pred -hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce
Confidence 357777777 9999999999 778888777765 34467788888876554 457788999999999987
Q ss_pred CCCCCCCcCCCCCCccEEEccCCCcccccCcccc---CCCcccEEEeccccccccCCccc-----cCccccceeeccccc
Q 002010 325 LRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLG---RNGKLLILDVTSNHLTGTIPRDL-----CKGGKLKSLILMQNF 396 (982)
Q Consensus 325 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~---~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~l~~N~ 396 (982)
+.+.+| .++.+++|+.|++++|.+++..+..+. ..++|++|++++|+++|.+|..+ .++++|+.+++++|.
T Consensus 209 ~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 287 (520)
T 2z7x_B 209 FLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDV 287 (520)
T ss_dssp HHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECC
T ss_pred eecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccc
Confidence 666665 678899999999999988764333222 24589999999999998999888 888999999999998
Q ss_pred ccccCC-ccccCC---CCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCccccc-CCccEEEeeccccCC-
Q 002010 397 FIGPIP-EELGQC---KSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSG-ASLNQLKVANNNITG- 470 (982)
Q Consensus 397 ~~~~~~-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~~- 470 (982)
+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|.+++.+|..+.. ++|++|++++|++++
T Consensus 288 ~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 363 (520)
T 2z7x_B 288 F--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363 (520)
T ss_dssp C--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBH
T ss_pred e--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcc
Confidence 8 455 555554 67999999999886432 1267888999999999999877776654 789999999999986
Q ss_pred -CCchhccCCCCcceeeeccccccCCCccc-cccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCccc
Q 002010 471 -KIPAAIGNLPSLNILSLQNNRLEGEIPVE-SFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGI 548 (982)
Q Consensus 471 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 548 (982)
.+|..++.+++|++|++++|++++.+|.. +..+++|++|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+
T Consensus 364 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 55678889999999999999998757764 77788999999999999887777664 78999999999998 788888
Q ss_pred ccccccceEEcccccccccCccc-cccccccceecccCCccccCCC
Q 002010 549 SKLIDLSILNLSRNGITGSIPNE-MRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 549 ~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
..+++|+.|+|++|+|++ +|.. +..+++|++|++++|++++..+
T Consensus 441 ~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 899999999999999984 5554 8889999999999999988765
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.8e-48 Score=455.76 Aligned_cols=451 Identities=19% Similarity=0.201 Sum_probs=318.9
Q ss_pred EEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCc
Q 002010 75 SLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNN 154 (982)
Q Consensus 75 ~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 154 (982)
.+|++++++. .+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|.+++..+ ..+.++++|++|+|++|
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDI-SVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEG-GGGTTCTTCCEEECCSS
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcCh-HHhhcccCCCEEecCCC
Confidence 4677777776 5777666 778888888888887766778888888888888888775433 45677888888888888
Q ss_pred cccCCCchhccccccccEEeecCccccc-ccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccC
Q 002010 155 NFTGPLPVEIASLKSLRHLSFGGNYFTG-KIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGI 233 (982)
Q Consensus 155 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~ 233 (982)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+.+.
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-------------------------- 130 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-------------------------- 130 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG--------------------------
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh--------------------------
Confidence 887 46655 77888888888888876 4677788888888888887776531
Q ss_pred CCCCCCCCCC--CEEecccCcC--cccCchhhcCCC-ccceeecccccCCCCCCc-cccCCCCCCEEEeeCCc-------
Q 002010 234 PPGFGALTQL--QVLDMASCNI--SGEIPTSLSRLK-LLHSLFLQMNKLTGHIPP-QLSGLISLKSLDLSLNY------- 300 (982)
Q Consensus 234 p~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~Ls~N~------- 300 (982)
.++.+++| ++|++++|.+ .+..|..+..+. +...+++++|++.+.++. .+..+++|+.|++++|.
T Consensus 131 --~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 131 --SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp --GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH
T ss_pred --hccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce
Confidence 12334445 7788888887 667777776665 344567777777765543 46667788888888876
Q ss_pred ccCcCchhhhcccchhhhhhccCCCCCCCCCcCC---CCCCccEEEccCCCcccccCccc-----cCCCcccEEEecccc
Q 002010 301 LTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLG---DFPNLEVLQVWGNNFTFELPENL-----GRNGKLLILDVTSNH 372 (982)
Q Consensus 301 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~L~~N~ 372 (982)
+.+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|++++|.+++.+|..+ +.+++|+.+++++|.
T Consensus 209 ~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 287 (520)
T 2z7x_B 209 FLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDV 287 (520)
T ss_dssp HHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECC
T ss_pred eecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccc
Confidence 555554 677777888888877777643221111 13577888888888877777777 777888888888887
Q ss_pred ccccCC-ccccCc---cccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccc-
Q 002010 373 LTGTIP-RDLCKG---GKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSG- 447 (982)
Q Consensus 373 l~~~~p-~~~~~~---~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~- 447 (982)
+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+..+++|++|++++|++++
T Consensus 288 ~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 363 (520)
T 2z7x_B 288 F--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363 (520)
T ss_dssp C--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBH
T ss_pred e--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcc
Confidence 7 455 444444 56788888888765432 12567778888888888887777778888888888888888875
Q ss_pred -cCCcccc-cCCccEEEeeccccCCCCch-hccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCccc
Q 002010 448 -ELPEKMS-GASLNQLKVANNNITGKIPA-AIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSI 524 (982)
Q Consensus 448 -~~~~~~~-~~~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 524 (982)
.+|..+. .++|++|++++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|++|+|++|+|+ .+|..+
T Consensus 364 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 3334343 36788888888888764554 477778888888888888766666553 67888888888887 677766
Q ss_pred ccccCCCeeeCCCCcccCCCCcc-cccccccceEEcccccccccCc
Q 002010 525 SQCHSLTSVDLSRNSLYGKIPPG-ISKLIDLSILNLSRNGITGSIP 569 (982)
Q Consensus 525 ~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 569 (982)
..+++|+.|+|++|+|+ .+|.. |..+++|++|+|++|++++..+
T Consensus 441 ~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 441 VKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 77888888888888887 45544 7778888888888888775433
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-48 Score=420.80 Aligned_cols=248 Identities=24% Similarity=0.249 Sum_probs=199.1
Q ss_pred hhcccccccccccceEEEEEEe----CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM----PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
++|++.+.||+|+||+||+|+. .+++.||||++.... .......+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999965 247889999985432 12233468899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
|||||+||+|.+++. +.+.+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+...+
T Consensus 104 vmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997 3467999999999999999999999998 99999999999999999999999999986543
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. .......+||+.|||||++.+..|+.++||||+||++|||+||++||......+....+ .....
T Consensus 179 ~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i-~~~~~------------ 243 (304)
T 3ubd_A 179 H--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI-LKAKL------------ 243 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHCCC------------
T ss_pred C--CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH-HcCCC------------
Confidence 2 22345678999999999999999999999999999999999999999764332222222 21111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTM-----REVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~ell~ 967 (982)
..|...+.++.+++.+||++||++|||+ +|+++
T Consensus 244 --------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 244 --------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1122334578899999999999999984 67764
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-46 Score=458.31 Aligned_cols=552 Identities=18% Similarity=0.141 Sum_probs=376.1
Q ss_pred CCCCCCCCCCCCCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceee
Q 002010 46 GLKNWEPSSSPSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFN 125 (982)
Q Consensus 46 ~~~~w~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 125 (982)
.+++|..+.| ..|..+.|......+ +.++.++. .||+.|. +++++|+|++|+|++..|..|.++++|++||
T Consensus 12 ~~~~~~~~~p----~~~~~c~~~~~~~~~--~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~ 82 (635)
T 4g8a_A 12 KLAAANSSIP----ESWEPCVEVVPNITY--QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLD 82 (635)
T ss_dssp -----------------CCSEEEETTTEE--ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred hhhcccCCCC----CCCCCccccCCCCEE--ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEE
Confidence 4777765422 245555554333332 33333433 5676553 5788999999999877777889999999999
Q ss_pred ccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccc
Q 002010 126 ISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLN 205 (982)
Q Consensus 126 Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~ 205 (982)
|++|.+++ ++..+|.++++|++|+|++|+|++..|..|+++++|++|+|++|++++..+..|+++++|++|++++|.+.
T Consensus 83 Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~ 161 (635)
T 4g8a_A 83 LSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 161 (635)
T ss_dssp CTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccc
Confidence 99998874 45567788899999999999988766777888999999999999998877778889999999999888876
Q ss_pred c-chhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCC----EEecccCcCcccCchhhcCCCccceeecccccCCCC
Q 002010 206 G-TVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQ----VLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGH 280 (982)
Q Consensus 206 ~-~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 280 (982)
+ ..|..+..+++|++|+++. |.+.+..|..|..+.+++ .++++.|.++...+..+ ....++.+++++|.....
T Consensus 162 ~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~ 239 (635)
T 4g8a_A 162 SFKLPEYFSNLTNLEHLDLSS-NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLN 239 (635)
T ss_dssp CCCCCGGGGGCTTCCEEECCS-SCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHH
T ss_pred cCCCchhhccchhhhhhcccC-ccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhccccccc
Confidence 5 3455666666666666654 344444444444443332 45566666654433333 223445555555544321
Q ss_pred -CCccccCCCCCCEEEeeCCc------ccCcCchhhhcccchhhhhhccCCCCC---CCCCcCCCCCCccEEEccCCCcc
Q 002010 281 -IPPQLSGLISLKSLDLSLNY------LTGEIPESFAALKNLTLLQLFKNNLRG---PIPSFLGDFPNLEVLQVWGNNFT 350 (982)
Q Consensus 281 -~~~~l~~l~~L~~L~Ls~N~------l~~~~~~~l~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~ 350 (982)
.+..+..+..++...+..+. +.......+..+..+...++..+.... ..+..+..+.+++.+.+.+|.+.
T Consensus 240 ~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 319 (635)
T 4g8a_A 240 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIE 319 (635)
T ss_dssp HHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEE
T ss_pred ccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccc
Confidence 22334455555554443322 121222333334444444443333221 23344556677888888888776
Q ss_pred cccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCC--CCCcc
Q 002010 351 FELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNG--TIPAG 428 (982)
Q Consensus 351 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~ 428 (982)
.. ..+.....|+.|++++|.+.+..+. .+..|+.+++..|.+... .....+++|+.|++++|.+.. ..+..
T Consensus 320 ~~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 392 (635)
T 4g8a_A 320 RV--KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQS 392 (635)
T ss_dssp EC--GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHH
T ss_pred cc--cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccc
Confidence 43 3355667788888888888754432 456777888888876543 234568888889998888753 44566
Q ss_pred ccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCc-hhccCCCCcceeeeccccccCCCccccccccccc
Q 002010 429 LFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIP-AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMIT 507 (982)
Q Consensus 429 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 507 (982)
+..+.+|+.+++..|.+....+......+|+.+++++|+.....+ ..|..+++++.+++++|++++..+..+..++.|+
T Consensus 393 ~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~ 472 (635)
T 4g8a_A 393 DFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 472 (635)
T ss_dssp HHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred hhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhh
Confidence 677888888888888887766665566788888888877765544 4577888899999999998888888888888999
Q ss_pred eeeeecccc-CCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCC
Q 002010 508 SINISDNNI-SGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYN 586 (982)
Q Consensus 508 ~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 586 (982)
.|+|++|++ .+.+|..|..+++|++|||++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|++|||++|
T Consensus 473 ~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 552 (635)
T 4g8a_A 473 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552 (635)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTS
T ss_pred hhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCC
Confidence 999998875 4457788888999999999999998888888999999999999999998888888888999999999999
Q ss_pred ccccCCCCCcc-c-cccccccccCCcCcccCC
Q 002010 587 NLIGNIPSGGQ-F-LAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 587 ~l~~~ip~~~~-~-~~~~~~~~~~n~~~c~~~ 616 (982)
+|++.+|...+ + .++....+.||||.|++.
T Consensus 553 ~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 553 HIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99988886432 2 456677788999999664
No 35
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-47 Score=417.33 Aligned_cols=267 Identities=27% Similarity=0.341 Sum_probs=200.7
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC----ccEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD----TNLLL 767 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv 767 (982)
++|...+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|++.+++ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 5678889999999999999988 78999999984321 11222334566667889999999999997654 46999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC-----SPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
||||++|+|.++++. .+++++.+.+++.|+++||+|||++. .++||||||||+|||++.++++||+|||+|+
T Consensus 80 ~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 999999999999974 46899999999999999999999761 2349999999999999999999999999998
Q ss_pred hccccCCc--ccccccccccccccccccccC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCch----------
Q 002010 843 FLQDAGAS--ECMSSVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVD---------- 904 (982)
Q Consensus 843 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~---------- 904 (982)
........ ......+||+.|||||++.+. .++.++|||||||++|||+||.+||....+...
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 76543221 122346799999999998754 467899999999999999999887754322110
Q ss_pred HHHHHHHhccCCCCCCcccccceeecCCCCC--CChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 905 IVRWVRKTTSEVSQPSDAASVLAVVDPRLSG--YPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
....+..... ....+|.++. .+.+.+..+.+++.+||+.||++||||+||++.|+++.+.
T Consensus 237 ~~~~~~~~~~-----------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKVVC-----------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHT-----------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHh-----------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0011111000 0112223321 1234567899999999999999999999999999876543
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-46 Score=407.27 Aligned_cols=257 Identities=21% Similarity=0.346 Sum_probs=193.0
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc------
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT------ 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 763 (982)
.++|+..+.||+|+||+||+|+. .+|+.||||++.........+.+.+|+.++++++|||||++++++.+.+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45799999999999999999965 56999999999655444455678999999999999999999999875443
Q ss_pred ------cEEEEeccCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 764 ------NLLLYEYMPNGSLGEMLHGAKG-GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 764 ------~~lv~e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
.|+|||||++|+|.+++..... ...++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEc
Confidence 5899999999999999974332 34566778899999999999999998 9999999999999999999999
Q ss_pred ccccchhccccCCc----------ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHH
Q 002010 837 DFGLAKFLQDAGAS----------ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIV 906 (982)
Q Consensus 837 DfG~a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 906 (982)
|||+|+.+...... ......+||+.|||||++.+..|+.++||||+||++|||++ ||... .+..
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~---~~~~ 234 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ---MERV 234 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH---HHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc---cHHH
Confidence 99999877543211 12344679999999999999999999999999999999996 77532 1111
Q ss_pred HHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCC
Q 002010 907 RWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANP 972 (982)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~ 972 (982)
..+..... ..++...........+++.+||++||++|||++|+++ .++++
T Consensus 235 ~~~~~~~~----------------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 235 RTLTDVRN----------------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHHT----------------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHHhc----------------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 21111111 0011111222335678999999999999999999987 45544
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.8e-44 Score=437.45 Aligned_cols=520 Identities=21% Similarity=0.201 Sum_probs=428.9
Q ss_pred ceeeeCCC----------CCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccc
Q 002010 63 SGVTCDQD----------SRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQ 132 (982)
Q Consensus 63 ~gv~C~~~----------~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 132 (982)
..|.|... ..++.|||+++.+.+-.|.+++.+++|++|+|++|++++..|.+|.++++|++|+|++|+++
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 45778642 25789999999998777778999999999999999999887889999999999999999997
Q ss_pred cccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCccccc-ccCCCccccCcceEeeccCcccccchhhH
Q 002010 133 GNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTG-KIPQSYSEIQSLEYIGLNGIGLNGTVPAF 211 (982)
Q Consensus 133 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~i~~~~~~~ 211 (982)
+ ++..+|.++++|++|+|++|++++..+..|+++++|++|+|++|++++ ..|..++.+++|++|++++|.+.+..+..
T Consensus 114 ~-l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 114 S-LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp E-ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred C-CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 5 566778999999999999999998777889999999999999999976 46888999999999999999999999999
Q ss_pred HhhhhhHHHHh----hcccccccccCCCCCCCCCCCCEEecccCcCccc-CchhhcCCCccceeecccccC------CCC
Q 002010 212 LSRLKNLREMY----IGYFNTYTGGIPPGFGALTQLQVLDMASCNISGE-IPTSLSRLKLLHSLFLQMNKL------TGH 280 (982)
Q Consensus 212 l~~l~~L~~L~----l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~N~l------~~~ 280 (982)
+..+.+++.+. ++. |.+. .+++.......++.|++.+|..... .+..+..+..++...+..+.. ...
T Consensus 193 l~~L~~l~~~~~~~~ls~-n~l~-~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~ 270 (635)
T 4g8a_A 193 LRVLHQMPLLNLSLDLSL-NPMN-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 270 (635)
T ss_dssp GHHHHTCTTCCCEEECTT-CCCC-EECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred ccchhhhhhhhhhhhccc-Cccc-ccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccc
Confidence 99888877543 332 3333 3455555566788899999877643 345678888888777654433 333
Q ss_pred CCccccCCCCCCEEEeeCCcccC---cCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccc
Q 002010 281 IPPQLSGLISLKSLDLSLNYLTG---EIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENL 357 (982)
Q Consensus 281 ~~~~l~~l~~L~~L~Ls~N~l~~---~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l 357 (982)
....+..+..+..+++..+.... ..+..+..+.+++.+++.+|.+.... .+....+|+.|++.+|.+....+.
T Consensus 271 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~-- 346 (635)
T 4g8a_A 271 DKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL-- 346 (635)
T ss_dssp CTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC--
T ss_pred cccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc--
Confidence 34455566677777776655432 23345666778888888888877433 356677899999999998855443
Q ss_pred cCCCcccEEEeccccccccCCccccCccccceeeccccccc--ccCCccccCCCCCCEEEccCCccCCCCCccccCCCcc
Q 002010 358 GRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFI--GPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLL 435 (982)
Q Consensus 358 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~--~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 435 (982)
.+..|+.++++.|.+... .....+++|+.|++++|.+. +..+..+..+.+|++++++.|.+. ..+..+..++.|
T Consensus 347 -~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L 422 (635)
T 4g8a_A 347 -KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQL 422 (635)
T ss_dssp -BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTC
T ss_pred -cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccc
Confidence 456788999999988643 34557889999999999875 456777888999999999999987 566778899999
Q ss_pred ccccCCCccccccCCcc-cc-cCCccEEEeeccccCCCCchhccCCCCcceeeeccccc-cCCCccccccccccceeeee
Q 002010 436 NMMELDDNLLSGELPEK-MS-GASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRL-EGEIPVESFNLKMITSINIS 512 (982)
Q Consensus 436 ~~L~L~~N~l~~~~~~~-~~-~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls 512 (982)
+.+++..|......+.. +. ...++.+++++|++.+..+..+..+++|+.|++++|++ .+..|..+..+++|++|+|+
T Consensus 423 ~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls 502 (635)
T 4g8a_A 423 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502 (635)
T ss_dssp CEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred cchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECC
Confidence 99999998887765543 22 37899999999999999999999999999999999985 44678889999999999999
Q ss_pred ccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccc-cccceecccCCccccC
Q 002010 513 DNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNM-MSLTTLDLSYNNLIGN 591 (982)
Q Consensus 513 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~ 591 (982)
+|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+ ++|++|+|++|++++.
T Consensus 503 ~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 503 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999999999999999999999889999999999999999999999999999998 6899999999999886
Q ss_pred CC
Q 002010 592 IP 593 (982)
Q Consensus 592 ip 593 (982)
-.
T Consensus 583 C~ 584 (635)
T 4g8a_A 583 CE 584 (635)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.9e-45 Score=433.97 Aligned_cols=455 Identities=19% Similarity=0.183 Sum_probs=345.7
Q ss_pred cccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEee
Q 002010 96 KLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSF 175 (982)
Q Consensus 96 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 175 (982)
..+++++++|++++ +|..+. ++|++|+|++|.+.+. +...+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISEL-RMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCC-CGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCcccc-ChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 34789999999985 776554 7888888888888754 3455678888888888888888777888888888888888
Q ss_pred cCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcc
Q 002010 176 GGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISG 255 (982)
Q Consensus 176 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 255 (982)
++|+++ .+|.. .+++|++|++++|.+.+. .+|..|+++++|++|++++|++++
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l------------------------~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVL------------------------PVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBC------------------------CCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCcccc------------------------CchHhhcccCcccEEecCCCcccc
Confidence 888887 56655 778888888887766521 234567788899999999999886
Q ss_pred cCchhhcCCCcc--ceeecccccC--CCCCCccccCCC-CCCEEEeeCCcccCcCc-hhhhcccchhhhhhccCCC----
Q 002010 256 EIPTSLSRLKLL--HSLFLQMNKL--TGHIPPQLSGLI-SLKSLDLSLNYLTGEIP-ESFAALKNLTLLQLFKNNL---- 325 (982)
Q Consensus 256 ~~~~~l~~l~~L--~~L~L~~N~l--~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l---- 325 (982)
. .+..+++| ++|++++|++ ++..|..+..+. ..-.+++++|.+.+.++ ..+..+++|+.|++++|+.
T Consensus 161 ~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 237 (562)
T 3a79_B 161 L---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQR 237 (562)
T ss_dssp T---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHH
T ss_pred C---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccch
Confidence 3 34555555 9999999998 878888887765 12256788888876554 3466788899999988852
Q ss_pred -CCCCCCcCCCCCCccEEEccCCCccccc----CccccCCCcccEEEeccccccccCCccc-----cCccccceeecccc
Q 002010 326 -RGPIPSFLGDFPNLEVLQVWGNNFTFEL----PENLGRNGKLLILDVTSNHLTGTIPRDL-----CKGGKLKSLILMQN 395 (982)
Q Consensus 326 -~~~~p~~~~~l~~L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~l~~N 395 (982)
.+ .+..+..+++|+.|+++++.+.+.. +..+ ...+|++|++++|.++|.+|..+ .++..|+.+++..|
T Consensus 238 l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~ 315 (562)
T 3a79_B 238 LMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQ 315 (562)
T ss_dssp HHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEEC
T ss_pred HHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcccc
Confidence 21 1234667788888888888776432 1222 23489999999999998888877 66677777777777
Q ss_pred cccccCC-ccccC---CCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCccccc-CCccEEEeeccccCC
Q 002010 396 FFIGPIP-EELGQ---CKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSG-ASLNQLKVANNNITG 470 (982)
Q Consensus 396 ~~~~~~~-~~l~~---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~~ 470 (982)
.+ .+| ..+.. ..+|++|++++|.+.... ....+++|++|++++|.+++.+|..+.. ++|++|++++|++++
T Consensus 316 ~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 391 (562)
T 3a79_B 316 VF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN 391 (562)
T ss_dssp CC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCB
T ss_pred ee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCC
Confidence 66 344 23322 267999999999886322 1267888999999999999877777654 789999999999986
Q ss_pred C--CchhccCCCCcceeeeccccccCCCccc-cccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcc
Q 002010 471 K--IPAAIGNLPSLNILSLQNNRLEGEIPVE-SFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPG 547 (982)
Q Consensus 471 ~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 547 (982)
. +|..++.+++|++|++++|++++.+|.. +..+++|++|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..
T Consensus 392 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 392 FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp TTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred cccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 3 3567889999999999999998756654 77889999999999999877776654 78999999999998 77877
Q ss_pred cccccccceEEcccccccccCccc-cccccccceecccCCccccCCCC
Q 002010 548 ISKLIDLSILNLSRNGITGSIPNE-MRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 548 ~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
+.++++|+.|+|++|+|++ +|.. +..+++|+.|++++|++++..|.
T Consensus 469 ~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 469 VTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 7799999999999999984 5554 88899999999999999887764
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.8e-44 Score=431.25 Aligned_cols=450 Identities=19% Similarity=0.236 Sum_probs=349.8
Q ss_pred EEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccC
Q 002010 74 VSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYN 153 (982)
Q Consensus 74 ~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 153 (982)
..+|++++++.+ +|..+. ++|++|+|++|++++..|..+..+++|++|+|++|.+++.. +..+.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLD-FHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEEC-TTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCC-HHHhCCCCCCCEEECCC
Confidence 567888888875 888765 89999999999999888899999999999999999998644 45678999999999999
Q ss_pred ccccCCCchhccccccccEEeecCccccc-ccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhccccccccc
Q 002010 154 NNFTGPLPVEIASLKSLRHLSFGGNYFTG-KIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGG 232 (982)
Q Consensus 154 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~ 232 (982)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+.+.
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~------------------------- 161 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL------------------------- 161 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-------------------------
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC-------------------------
Confidence 9999 67776 89999999999999997 4578999999999999999988632
Q ss_pred CCCCCCCCCCC--CEEecccCcC--cccCchhhcCCC--ccceeecccccCCCCCCc-cccCCCCCCEEEeeCCc-----
Q 002010 233 IPPGFGALTQL--QVLDMASCNI--SGEIPTSLSRLK--LLHSLFLQMNKLTGHIPP-QLSGLISLKSLDLSLNY----- 300 (982)
Q Consensus 233 ~p~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~l~--~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~Ls~N~----- 300 (982)
.+..+++| ++|++++|.+ ++..|..+..+. .| .+++++|.+.+.++. .+..+++|+.|++++|.
T Consensus 162 ---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 237 (562)
T 3a79_B 162 ---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQR 237 (562)
T ss_dssp ---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHH
T ss_pred ---chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccch
Confidence 12233334 7777777777 667777766654 33 456777777765543 35566777778887774
Q ss_pred ccCcCchhhhcccchhhhhhccCCCCCC----CCCcCCCCCCccEEEccCCCcccccCccc-----cCCCcccEEEeccc
Q 002010 301 LTGEIPESFAALKNLTLLQLFKNNLRGP----IPSFLGDFPNLEVLQVWGNNFTFELPENL-----GRNGKLLILDVTSN 371 (982)
Q Consensus 301 l~~~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~L~~N 371 (982)
+.+ ....+..+++|+.|++.++.+.+. ++..+ ..++|++|++++|.+++.+|..+ ..++.|+.++++.|
T Consensus 238 l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~ 315 (562)
T 3a79_B 238 LMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQ 315 (562)
T ss_dssp HHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEEC
T ss_pred HHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcccc
Confidence 221 223456667777777776665532 11111 23478888888888887777776 67777777777777
Q ss_pred cccccCC-ccccC---ccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccc
Q 002010 372 HLTGTIP-RDLCK---GGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSG 447 (982)
Q Consensus 372 ~l~~~~p-~~~~~---~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 447 (982)
.+ .+| ..+.. ..+|++|++++|.+.... ..+.+++|++|++++|++++.+|..+..+++|++|++++|++++
T Consensus 316 ~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 391 (562)
T 3a79_B 316 VF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN 391 (562)
T ss_dssp CC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCB
T ss_pred ee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCC
Confidence 77 444 22222 256888888888875322 12678889999999999998888889999999999999999886
Q ss_pred cC--Ccccc-cCCccEEEeeccccCCCCc-hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcc
Q 002010 448 EL--PEKMS-GASLNQLKVANNNITGKIP-AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYS 523 (982)
Q Consensus 448 ~~--~~~~~-~~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 523 (982)
.. |..+. ..+|++|++++|++++.+| ..+..+++|++|++++|++++.+|..+. ++|++|+|++|+|+ .+|..
T Consensus 392 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 392 FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp TTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred cccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 43 33343 3789999999999998444 4688999999999999999987776654 79999999999999 67877
Q ss_pred cccccCCCeeeCCCCcccCCCCcc-cccccccceEEcccccccccCc
Q 002010 524 ISQCHSLTSVDLSRNSLYGKIPPG-ISKLIDLSILNLSRNGITGSIP 569 (982)
Q Consensus 524 ~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 569 (982)
+..+++|+.|+|++|+|+ .+|.. |..+++|+.|+|++|.+++..+
T Consensus 469 ~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 469 VTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 779999999999999999 56665 9999999999999999997555
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=405.25 Aligned_cols=276 Identities=22% Similarity=0.286 Sum_probs=209.1
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcC------Cc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR------DT 763 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 763 (982)
++|++.+.||+|+||+||+|.. .+|+.||||++...... ...+.+.+|+.+|++++|||||++++++... ..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999965 57999999999544322 2345688999999999999999999987643 56
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.|+|||||+ |+|.+++. +.+.+++.++..++.||+.||+|||+++ ||||||||+||+++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 799999995 68999997 4568999999999999999999999998 99999999999999999999999999987
Q ss_pred ccccC--CcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 844 LQDAG--ASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 844 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
+.... ........+||+.|||||++.+. .|+.++||||+||++|||++|++||.+......+..+............
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 64331 22334567899999999998875 4699999999999999999999999875444444444333332211100
Q ss_pred cc---cccceeec--CCCCCC-----ChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCC
Q 002010 921 DA---ASVLAVVD--PRLSGY-----PLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPP 973 (982)
Q Consensus 921 ~~---~~~~~~~~--~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~ 973 (982)
.. ......+. +..... .......+.+|+.+||+.||++|||++|+++ .+.+..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 00 00000000 000111 1123456889999999999999999999987 454443
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.6e-43 Score=392.03 Aligned_cols=267 Identities=22% Similarity=0.302 Sum_probs=201.4
Q ss_pred HHhhcccccccccccceEEEEEEe----CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCcc
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM----PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 764 (982)
+.++|++.+.||+|+||+||+|+. ..++.||+|++... .....+.+|+++++.+ +|||||++++++.+++..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 456799999999999999999964 24788999988443 3456688999999998 699999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC-CCEEEeccccchh
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD-FEAHVADFGLAKF 843 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfG~a~~ 843 (982)
|+||||+++|+|.+++. .+++.++..++.||+.||+|||++| |+||||||+|||++.+ +.+||+|||+|+.
T Consensus 96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 99999999999999984 5899999999999999999999998 9999999999999877 7999999999976
Q ss_pred ccccCC--------------------------cccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCC
Q 002010 844 LQDAGA--------------------------SECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPV 896 (982)
Q Consensus 844 ~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~ 896 (982)
..+... .......+||+.|||||++.+. .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 543211 1122346799999999999875 5899999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhccC-----------------CCCCCc-ccccc---eeec---CCCC----------CCChHhHH
Q 002010 897 GEFGDGVDIVRWVRKTTSE-----------------VSQPSD-AASVL---AVVD---PRLS----------GYPLTGVI 942 (982)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~-~~~~~---~~~~---~~~~----------~~~~~~~~ 942 (982)
....+..+....+...... ...+.. ..... ...+ |... ......+.
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 7655443333222211100 000000 00000 0000 0000 11122345
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 943 HLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 943 ~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
+..+|+.+||+.||++|||++|+++
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhc
Confidence 6789999999999999999999985
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6e-43 Score=407.97 Aligned_cols=250 Identities=24% Similarity=0.269 Sum_probs=201.3
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHH---HHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFL---AEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
.++|++.+.||+|+||.||+|+. .+|+.||||++.+.. .......+. +++.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 35799999999999999999965 569999999985431 112222333 346677788999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
|+||||++||+|.+++. +.+.+++..+..++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|+.+
T Consensus 268 ylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999997 4468999999999999999999999988 999999999999999999999999999876
Q ss_pred cccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 845 QDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 845 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
... .....+||+.|||||++.+ ..|+.++||||+||++|||++|++||........ ...........
T Consensus 343 ~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i~~~~------- 410 (689)
T 3v5w_A 343 SKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMA------- 410 (689)
T ss_dssp SSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHHHHCC-------
T ss_pred CCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCC-------
Confidence 533 2345789999999999964 5799999999999999999999999976433221 12222111100
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPT-----MREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~ell~ 967 (982)
..+|...+.++.+|+.+||++||.+|++ ++||++
T Consensus 411 ----------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 ----------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ----------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 0122233457899999999999999998 677765
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.9e-42 Score=401.62 Aligned_cols=387 Identities=17% Similarity=0.176 Sum_probs=270.7
Q ss_pred EEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccc
Q 002010 148 VLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFN 227 (982)
Q Consensus 148 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n 227 (982)
.++.++++++ .+|. +. ++|++|+|++|.+++..|..|+++++|++|++++|.+.+.+
T Consensus 14 ~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i------------------- 70 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVI------------------- 70 (455)
T ss_dssp EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEE-------------------
T ss_pred ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceE-------------------
Confidence 4555555555 4444 22 56666666666666666666666666666666665443211
Q ss_pred cccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCcc--ccCCCCCCEEEeeCCcccCcC
Q 002010 228 TYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQ--LSGLISLKSLDLSLNYLTGEI 305 (982)
Q Consensus 228 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~--l~~l~~L~~L~Ls~N~l~~~~ 305 (982)
.+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+.. +..+++|++|+|++|++++..
T Consensus 71 -----~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 145 (455)
T 3v47_A 71 -----RNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQ 145 (455)
T ss_dssp -----CTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCC
T ss_pred -----CcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccC
Confidence 1234566667777777777777666667777777777777777776544433 666777777777777777665
Q ss_pred chh-hhcccchhhhhhccCCCCCCCCCcCCCC--CCccEEEccCCCcccccCccc--------cCCCcccEEEecccccc
Q 002010 306 PES-FAALKNLTLLQLFKNNLRGPIPSFLGDF--PNLEVLQVWGNNFTFELPENL--------GRNGKLLILDVTSNHLT 374 (982)
Q Consensus 306 ~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~l--------~~l~~L~~L~L~~N~l~ 374 (982)
|.. +..+++|++|++++|++.+..|..+..+ .+|+.|++++|.+....+..+ ..+++|++|++++|+++
T Consensus 146 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~ 225 (455)
T 3v47_A 146 PASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK 225 (455)
T ss_dssp CCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCC
T ss_pred cccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCccc
Confidence 554 6666677777777777666666666554 566666666666664433322 23345555555555555
Q ss_pred ccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcc--
Q 002010 375 GTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEK-- 452 (982)
Q Consensus 375 ~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-- 452 (982)
+..|..+... ...++|+.|++++|.+.+... ..+.+....+..
T Consensus 226 ~~~~~~~~~~---------------------~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~ 270 (455)
T 3v47_A 226 ESMAKRFFDA---------------------IAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFK 270 (455)
T ss_dssp HHHHHHHHHH---------------------TTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTG
T ss_pred ccchhhhhcc---------------------ccccceeeEeecccccccccc--------------chhhhccCcccccc
Confidence 4444433322 012556666666665543211 111111111111
Q ss_pred -cccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCC
Q 002010 453 -MSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLT 531 (982)
Q Consensus 453 -~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 531 (982)
....+|+.|++++|++++.+|..++.+++|++|++++|++++..|..+..+++|++|+|++|++++..|..|.++++|+
T Consensus 271 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 350 (455)
T 3v47_A 271 GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350 (455)
T ss_dssp GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC
T ss_pred cccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC
Confidence 1225799999999999999999999999999999999999988888999999999999999999988899999999999
Q ss_pred eeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCCCcc
Q 002010 532 SVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQ 597 (982)
Q Consensus 532 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 597 (982)
.|+|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|++|++++|++++.+|....
T Consensus 351 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 416 (455)
T 3v47_A 351 VLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 416 (455)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred EEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchH
Confidence 999999999998899999999999999999999987777889999999999999999999996543
No 44
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.4e-42 Score=407.93 Aligned_cols=254 Identities=23% Similarity=0.352 Sum_probs=209.9
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.+.++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+.+|+.++|||||++++++.++...|+|
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc-chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 3457899999999999999999965 56999999998543 233456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC--CCEEEeccccchhcc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD--FEAHVADFGLAKFLQ 845 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~ 845 (982)
||||+||+|.+++.. +...+++.++..++.||+.||+|||+++ |+||||||+||+++.+ +.+||+|||+|+.+.
T Consensus 233 ~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 233 YEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 999999999999963 3467999999999999999999999998 9999999999999854 899999999998775
Q ss_pred ccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
.. ......+||+.|||||++.+..|+.++||||+||++|||++|++||.+....+.+ ..+.........
T Consensus 309 ~~---~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~-~~i~~~~~~~~~------- 377 (573)
T 3uto_A 309 PK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKSCDWNMDD------- 377 (573)
T ss_dssp TT---SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHTTCCCCCS-------
T ss_pred CC---CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHHhCCCCCCc-------
Confidence 43 3345568999999999999999999999999999999999999999865433222 222221110000
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+|+.+||+.||.+|||++|+++
T Consensus 378 ---------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 ---------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ---------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001122346889999999999999999999987
No 45
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.2e-42 Score=378.08 Aligned_cols=292 Identities=29% Similarity=0.467 Sum_probs=244.1
Q ss_pred cCchhHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCc--cceeeeCCC---CCEEEEEeccCCccc--cCCcCccccc
Q 002010 23 SCAYSDMDVLLKLKSSMIGPKGSGLKNWEPSSSPSAHCS--FSGVTCDQD---SRVVSLNVSFMPLFG--SIPPEIGLLT 95 (982)
Q Consensus 23 ~~~~~~~~~ll~~k~~~~~~~~~~~~~w~~~~~~~~~C~--w~gv~C~~~---~~v~~l~l~~~~l~g--~~~~~i~~l~ 95 (982)
.|.++|++||++||+++.+|. .+++|..+ .+||. |.||+|+.. ++|+.++++++.+.| .+|+.++.++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~--~l~~W~~~---~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT--TLSSWLPT---TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG--GGTTCCTT---SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcCCcc--cccCCCCC---CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCC
Confidence 599999999999999997664 68999753 46787 999999864 799999999999999 9999999999
Q ss_pred cccEEEecc-CCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEe
Q 002010 96 KLVNLTISN-VNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLS 174 (982)
Q Consensus 96 ~L~~L~l~~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 174 (982)
+|++|+|++ |++++.+|..++.+++|++|+|++|.+.+.++. .+.++++|++|+|++|++++.+|..++.+++|++|+
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCH-HHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 999999995 999999999999999999999999999877775 467899999999999999999999999999999999
Q ss_pred ecCcccccccCCCccccC-cceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcC
Q 002010 175 FGGNYFTGKIPQSYSEIQ-SLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNI 253 (982)
Q Consensus 175 L~~N~l~~~~p~~~~~l~-~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 253 (982)
|++|++++.+|..++.++ +|++|++++|.+.+..|..+ +.++ |++|++++|++
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~-------------------------~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF-------------------------ANLN-LAFVDLSRNML 209 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGG-------------------------GGCC-CSEEECCSSEE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHH-------------------------hCCc-ccEEECcCCcc
Confidence 999999999999999998 99999999988766555544 4444 77777777777
Q ss_pred cccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcC
Q 002010 254 SGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFL 333 (982)
Q Consensus 254 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 333 (982)
++..|..|..+++|++|+|++|++++.+|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 777777777777777777777777755554 666777777777777777777777777777777777777777777765
Q ss_pred CCCCCccEEEccCCC
Q 002010 334 GDFPNLEVLQVWGNN 348 (982)
Q Consensus 334 ~~l~~L~~L~L~~N~ 348 (982)
..+++|+.|++++|+
T Consensus 288 ~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 GNLQRFDVSAYANNK 302 (313)
T ss_dssp TTGGGSCGGGTCSSS
T ss_pred ccccccChHHhcCCC
Confidence 667777777777776
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.3e-41 Score=390.71 Aligned_cols=402 Identities=23% Similarity=0.304 Sum_probs=148.5
Q ss_pred CCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhh
Q 002010 144 TELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYI 223 (982)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l 223 (982)
+.|++|++++|++ |.+|.+++++++|++|++++|+++|.+|.+++++++|+.+++.+|. ..++++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~-----------~~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCL-----------DRQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHH-----------HHTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhh-----------ccCCCEEEe
Confidence 4455555555555 3555555555555555555555555555555555544332222211 012222222
Q ss_pred cccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccC
Q 002010 224 GYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTG 303 (982)
Q Consensus 224 ~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 303 (982)
+++ .+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++. +.. .++|++|++++|++++
T Consensus 79 ~~~-~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 79 NNL-GLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp TTS-CCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS
T ss_pred cCC-cccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC
Confidence 221 1111 1211 1344445555554443 3321 24444455555544421 111 1344555555555443
Q ss_pred cCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccC
Q 002010 304 EIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCK 383 (982)
Q Consensus 304 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 383 (982)
+| .|+.+++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++.+++|++|++++|++++ +|...
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-- 214 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-- 214 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--
Confidence 33 34444455555555554443 33222 244555555554443 22 34444555555555555443 22211
Q ss_pred ccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEe
Q 002010 384 GGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKV 463 (982)
Q Consensus 384 ~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L 463 (982)
.+|++|++++|.+. .+| .++.+++|++|++++|++++ +|.. .++|+.|++++|++++ +|... .+|++|++
T Consensus 215 -~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l 284 (454)
T 1jl5_A 215 -LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPELP--QSLTFLDV 284 (454)
T ss_dssp -TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCC--TTCCEEEC
T ss_pred -CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCccc--CcCCEEEC
Confidence 24455555555444 333 24445555555555555542 2321 2344555555555443 22211 34555555
Q ss_pred eccccCCCCchhccCCCCcceeeeccccccCCCccccccc-cccceeeeeccccCCCCCcccccccCCCeeeCCCCcccC
Q 002010 464 ANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNL-KMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYG 542 (982)
Q Consensus 464 ~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 542 (982)
++|++++. |. -.++|++|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|+.|++++|+++
T Consensus 285 s~N~l~~l-~~---~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~- 350 (454)
T 1jl5_A 285 SENIFSGL-SE---LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA- 350 (454)
T ss_dssp CSSCCSEE-SC---CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-
T ss_pred cCCccCcc-cC---cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-
Confidence 55555431 11 01345555555555542 11 11 345555555555553 3322 344555555555554
Q ss_pred CCCcccccccccceEEcccccccc--cCccccccc-------------cccceecccCCcccc--CCCCCcccccccccc
Q 002010 543 KIPPGISKLIDLSILNLSRNGITG--SIPNEMRNM-------------MSLTTLDLSYNNLIG--NIPSGGQFLAFNETS 605 (982)
Q Consensus 543 ~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l-------------~~L~~L~Ls~N~l~~--~ip~~~~~~~~~~~~ 605 (982)
.+|. .+++|++|+|++|++++ .+|.++..+ ++|++||+++|+++| .+|.. +....
T Consensus 351 ~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~s-----l~~L~ 422 (454)
T 1jl5_A 351 EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPES-----VEDLR 422 (454)
T ss_dssp CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------------------------
T ss_pred cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhh-----Hhhee
Confidence 2333 24455555555555554 444444444 789999999999998 67753 23334
Q ss_pred ccCCcCcc
Q 002010 606 FIGNPNLC 613 (982)
Q Consensus 606 ~~~n~~~c 613 (982)
+.+|...|
T Consensus 423 ~~~~~~~~ 430 (454)
T 1jl5_A 423 MNSERVVD 430 (454)
T ss_dssp --------
T ss_pred CcCcccCC
Confidence 44554444
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.7e-42 Score=396.47 Aligned_cols=420 Identities=22% Similarity=0.265 Sum_probs=225.6
Q ss_pred CCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEe
Q 002010 71 SRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLD 150 (982)
Q Consensus 71 ~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 150 (982)
.++..++++++.+ |.+|++++.+++|++|++++|+++|.+|..++.+.+|+.+++++|.. .++++|+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~~l~~L~ 77 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------RQAHELE 77 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------HTCSEEE
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------cCCCEEE
Confidence 3555666666666 67777777777777777777777777777777766666666654431 4568888
Q ss_pred ccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhccccccc
Q 002010 151 AYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYT 230 (982)
Q Consensus 151 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~ 230 (982)
+++|++++ +|.. .++|++|++++|++++ +|.. +++|++|++++|.+.+.
T Consensus 78 l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l----------------------- 126 (454)
T 1jl5_A 78 LNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL----------------------- 126 (454)
T ss_dssp CTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-----------------------
T ss_pred ecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-----------------------
Confidence 88888875 4442 3678888888888886 6643 36778888887766521
Q ss_pred ccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhh
Q 002010 231 GGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFA 310 (982)
Q Consensus 231 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~ 310 (982)
|.. .++|++|++++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++
T Consensus 127 ---~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~ 192 (454)
T 1jl5_A 127 ---SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQ 192 (454)
T ss_dssp ---CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCT
T ss_pred ---cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-ccc
Confidence 110 1567778888887775 55 47777778888888877774 44332 477777887777775 45 477
Q ss_pred cccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCcccccee
Q 002010 311 ALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSL 390 (982)
Q Consensus 311 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L 390 (982)
.+++|++|++++|++++ +|... ++|++|++++|.++ .+| .++.+++|++|++++|++++ +|.. .++|++|
T Consensus 193 ~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L 262 (454)
T 1jl5_A 193 NLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEAL 262 (454)
T ss_dssp TCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEE
T ss_pred CCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEE
Confidence 77777777777777775 44332 47777777777777 455 37777777777777777774 4432 3567777
Q ss_pred ecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCC
Q 002010 391 ILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITG 470 (982)
Q Consensus 391 ~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~ 470 (982)
++++|.+.+ +|.. .++|++|++++|++++ +|.. .++|+.|++++|.+++.. .. ..+|++|++++|++++
T Consensus 263 ~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~i~-~~--~~~L~~L~Ls~N~l~~ 331 (454)
T 1jl5_A 263 NVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRSLC-DL--PPSLEELNVSNNKLIE 331 (454)
T ss_dssp ECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSEEC-CC--CTTCCEEECCSSCCSC
T ss_pred ECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCccc-CC--cCcCCEEECCCCcccc
Confidence 777777665 3432 3567777777777764 2211 145666667766666421 11 1356677777777664
Q ss_pred CCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCC--CCCcccccccCCCeeeCCCCcccCCCCccc
Q 002010 471 KIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISG--EIPYSISQCHSLTSVDLSRNSLYGKIPPGI 548 (982)
Q Consensus 471 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 548 (982)
+|.. +++|++|++++|+++ .+|. .+++|++|++++|++++ .+|.++.. |+.|.+.|.+|..
T Consensus 332 -lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~- 394 (454)
T 1jl5_A 332 -LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL- 394 (454)
T ss_dssp -CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------
T ss_pred -cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc-
Confidence 3432 466677777777766 3554 35667777777777766 45554432 2335555566653
Q ss_pred ccccccceEEcccccccc--cCccccccccccceecccCCccccCCCC
Q 002010 549 SKLIDLSILNLSRNGITG--SIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 549 ~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
+++|+.|++++|++++ .+|. +++.|.+.+|.+.+.+|.
T Consensus 395 --~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 395 --PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ------------------------------------------------
T ss_pred --cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcccc
Confidence 4789999999999997 6665 456678899999988774
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.8e-41 Score=373.85 Aligned_cols=276 Identities=35% Similarity=0.603 Sum_probs=226.4
Q ss_pred HHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
..++|+..+.||+|+||.||+|...+++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence 45689999999999999999999888999999987443 34456778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 770 YMPNGSLGEMLHGAK--GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|+++++|.+++.... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 116 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp CCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred cCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999997543 235899999999999999999999988 999999999999999999999999999865433
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC--chHHHHHHHhccCCCCCCccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDG--VDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
..........||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....|...... ....
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 265 (321)
T 2qkw_B 193 DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-------NGQL 265 (321)
T ss_dssp SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-------TTCC
T ss_pred cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-------cccH
Confidence 3333334556899999999999889999999999999999999999999764322 222333222211 1112
Q ss_pred ceeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 926 LAVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 926 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
...+++... ..+...+..+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 233344443 567788899999999999999999999999999998765443
No 49
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.5e-42 Score=397.31 Aligned_cols=376 Identities=18% Similarity=0.178 Sum_probs=290.7
Q ss_pred CCccce--eeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccc
Q 002010 59 HCSFSG--VTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFA 136 (982)
Q Consensus 59 ~C~w~g--v~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~ 136 (982)
.|.|.+ |.|+..+ ...+|. ..++|++|+|++|++++..|..+.++++|++|+|++|.+.+.++
T Consensus 7 ~c~~~~~~~~c~~~~------------l~~lp~---l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~ 71 (455)
T 3v47_A 7 ECSVIGYNAICINRG------------LHQVPE---LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR 71 (455)
T ss_dssp CCEEETTEEECCSSC------------CSSCCC---CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC
T ss_pred eeEEEccccCcCCCC------------cccCCC---CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC
Confidence 455544 8887543 234554 23789999999999998889999999999999999999988888
Q ss_pred hhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCC--ccccCcceEeeccCcccccchhhHHhh
Q 002010 137 GQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQS--YSEIQSLEYIGLNGIGLNGTVPAFLSR 214 (982)
Q Consensus 137 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~n~i~~~~~~~l~~ 214 (982)
...+.++++|++|+|++|++++..|..++++++|++|+|++|++++..|.. |+.+++|++|++++|.+.+..|..
T Consensus 72 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--- 148 (455)
T 3v47_A 72 NNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS--- 148 (455)
T ss_dssp TTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG---
T ss_pred cccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc---
Confidence 888899999999999999999888999999999999999999999866554 999999999999998877554433
Q ss_pred hhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCC--CccceeecccccCCCCCCcc--------
Q 002010 215 LKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRL--KLLHSLFLQMNKLTGHIPPQ-------- 284 (982)
Q Consensus 215 l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~-------- 284 (982)
.++++++|++|++++|++++..+..+..+ .+|+.|++++|.+.+..+..
T Consensus 149 ---------------------~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~ 207 (455)
T 3v47_A 149 ---------------------FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGN 207 (455)
T ss_dssp ---------------------GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCC
T ss_pred ---------------------ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccccccc
Confidence 14556667777777777776666666555 56777777777776544332
Q ss_pred ccCCCCCCEEEeeCCcccCcCchhhhcc---cchhhhhhccCCCCCC----------CCCcCCC--CCCccEEEccCCCc
Q 002010 285 LSGLISLKSLDLSLNYLTGEIPESFAAL---KNLTLLQLFKNNLRGP----------IPSFLGD--FPNLEVLQVWGNNF 349 (982)
Q Consensus 285 l~~l~~L~~L~Ls~N~l~~~~~~~l~~l---~~L~~L~L~~N~l~~~----------~p~~~~~--l~~L~~L~L~~N~l 349 (982)
+..+++|++|++++|++++..|..+..+ ++|+.|++++|.+.+. .+..+.. .++|+.|++++|.+
T Consensus 208 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l 287 (455)
T 3v47_A 208 PFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKI 287 (455)
T ss_dssp TTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCC
T ss_pred ccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccc
Confidence 2245667777777777776666665544 6677777776654432 1222222 35788888888888
Q ss_pred ccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccc
Q 002010 350 TFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGL 429 (982)
Q Consensus 350 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 429 (982)
++..|..++.+++|++|++++|++++..|..+..+++|++|++++|.+.+..|..++++++|++|+|++|++++..|..+
T Consensus 288 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 367 (455)
T 3v47_A 288 FALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSF 367 (455)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTT
T ss_pred cccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhc
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888887778888
Q ss_pred cCCCccccccCCCccccccCCccccc-CCccEEEeeccccCCCCc
Q 002010 430 FNLPLLNMMELDDNLLSGELPEKMSG-ASLNQLKVANNNITGKIP 473 (982)
Q Consensus 430 ~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~~~~p 473 (982)
..+++|++|++++|++++..+..+.. ++|++|++++|++++..|
T Consensus 368 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 368 LGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 88888888888888888766666543 788888888888887665
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.4e-41 Score=381.04 Aligned_cols=261 Identities=24% Similarity=0.399 Sum_probs=216.0
Q ss_pred HhhcccccccccccceEEEEEEe--------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcC
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM--------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNR 761 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 761 (982)
.++|+..+.||+|+||.||+|+. .++..||||++...........+.+|+.+++++ +||||+++++++.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36789999999999999999964 235679999986554444456789999999999 899999999999999
Q ss_pred CccEEEEeccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAK--------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL 827 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill 827 (982)
+..++||||+++|+|.+++.... ...+++.++..++.||+.||+|||+.+ |+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997543 245899999999999999999999998 9999999999999
Q ss_pred cCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHH
Q 002010 828 DSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIV 906 (982)
Q Consensus 828 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 906 (982)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... ...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~ 315 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 315 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHH
Confidence 9999999999999987654433333445567889999999999999999999999999999999 99999865432 222
Q ss_pred HHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 907 RWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..+..... ...+..++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 316 ~~~~~~~~-------------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 316 KLLKEGHR-------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHHTTCC-------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcCCC-------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22222111 12233445679999999999999999999999999987643
No 51
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.9e-41 Score=372.25 Aligned_cols=278 Identities=42% Similarity=0.709 Sum_probs=225.8
Q ss_pred HHHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
...++|+..+.||+|+||.||+|+..+++.||||++...........+.+|+.++++++||||+++++++.++...++||
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 106 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 106 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEE
T ss_pred HHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEE
Confidence 34568999999999999999999887899999999966555555567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 769 EYMPNGSLGEMLHGAK--GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||+++++|.+++.... ...+++..+..++.|++.|++|||+...++|+||||||+||+++.++.+||+|||++.....
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 186 (326)
T 3uim_A 107 PYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186 (326)
T ss_dssp ECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCS
T ss_pred EeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCc
Confidence 9999999999998543 34599999999999999999999998111299999999999999999999999999987653
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC----CCCCchHHHHHHHhccCCCCCCcc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGE----FGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
. .........||+.|+|||++.+..++.++||||+|+++|||++|+.||.. .........++......
T Consensus 187 ~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------- 258 (326)
T 3uim_A 187 K-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE------- 258 (326)
T ss_dssp S-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSS-------
T ss_pred c-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhc-------
Confidence 3 22333455699999999999988899999999999999999999999962 22333444554433321
Q ss_pred cccceeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 923 ASVLAVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 923 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
.......+.... ..+...+..+.+++.+||+.||.+|||++||++.|++...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 122223333333 5677888899999999999999999999999999976443
No 52
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=375.13 Aligned_cols=252 Identities=22% Similarity=0.321 Sum_probs=201.2
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.+.++|+..+.||+|+||+||+|.. .+|+.||||++...........+.+|+.++++++||||+++++++.+.+..++|
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 4557899999999999999999965 679999999996665555566789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ...+++.++..++.||+.|++|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 87 ~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 87 LEYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 999999999999973 457999999999999999999999998 999999999999999999999999998765432
Q ss_pred CCcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
.........||+.|+|||++.+..+ +.++||||+||++|+|++|..||........ ...+.....
T Consensus 162 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~------------ 227 (347)
T 3zgw_A 162 -KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL-YKKIMRGKY------------ 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC------------
T ss_pred -CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCC------------
Confidence 2223345679999999999988775 8999999999999999999999976432222 222211111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 228 --------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 228 --------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 112223346889999999999999999999987
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-40 Score=364.24 Aligned_cols=250 Identities=24% Similarity=0.347 Sum_probs=209.6
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||+||+|.. .+++.||+|++... .......+.+|+.++++++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG-GCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc-cccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46799999999999999999974 57899999998543 33446678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++++|.+++.. ..+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 170 (297)
T 3fxz_A 98 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (297)
T ss_dssp CCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred CCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-
Confidence 9999999999964 36899999999999999999999998 9999999999999999999999999998765432
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....................
T Consensus 171 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 236 (297)
T 3fxz_A 171 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL------------- 236 (297)
T ss_dssp -CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC-------------
T ss_pred -cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-------------
Confidence 223456799999999999999999999999999999999999999976543332222222211111
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 237 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 237 -----QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -----SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 112334457899999999999999999999987
No 54
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=371.31 Aligned_cols=263 Identities=29% Similarity=0.449 Sum_probs=213.1
Q ss_pred HhhcccccccccccceEEEEEEeC----CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP----DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.++|++.+.||+|+||.||+|... .+..||||++.........+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357889999999999999999763 3456999999655455556679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 9999999999999964 3457999999999999999999999998 99999999999999999999999999987654
Q ss_pred cCC-cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 847 AGA-SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 847 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... ........+|+.|+|||++.+..++.++||||+|+++|||++ |..||....... ....+.....
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~~~~~~~~---------- 272 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-VISSVEEGYR---------- 272 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-HHHHHHTTCC----------
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHHcCCC----------
Confidence 321 112233456778999999998999999999999999999999 999997654322 2222221111
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCC
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAP 977 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~ 977 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 273 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 ---------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ---------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 01223345678999999999999999999999999987655433
No 55
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-40 Score=367.41 Aligned_cols=255 Identities=23% Similarity=0.291 Sum_probs=208.4
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.++|+..+.||+|+||.||+|... +++.||+|++.........+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3578999999999999999999754 789999999865555455567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||++..+....
T Consensus 85 e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 9999999999996 4457999999999999999999999998 9999999999999999999999999998765443
Q ss_pred CcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.........||+.|+|||++.+..+ +.++||||+||++|||++|+.||....................
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 228 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL----------- 228 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-----------
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-----------
Confidence 3344456789999999999987775 7899999999999999999999987544332222221111100
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+++.+||+.||++|||++|+++
T Consensus 229 -------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 -------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp -------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001223456789999999999999999999987
No 56
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-40 Score=367.30 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=207.3
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35799999999999999999975 679999999985543 2234456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++.. ...+++.++..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 99999999999973 357999999999999999999999998 999999999999999999999999999876533
Q ss_pred CcccccccccccccccccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVD-EKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.......||+.|+|||++.+..+. .++||||+||++|||++|+.||...... .....+.....
T Consensus 168 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~------------- 231 (328)
T 3fe3_A 168 --GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-ELRERVLRGKY------------- 231 (328)
T ss_dssp --CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC-------------
T ss_pred --CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC-------------
Confidence 234567899999999999888775 7999999999999999999999764322 22222221111
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..|...+..+.+++.+||+.||.+|||++|+++
T Consensus 232 -------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 -------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112223457889999999999999999999987
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.7e-40 Score=363.10 Aligned_cols=262 Identities=32% Similarity=0.481 Sum_probs=204.7
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|++.+.||+|+||+||+|+. ++..||||++...... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 45789999999999999999987 7889999998544322 234578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 770 YMPNGSLGEMLHGAKG-GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
|+++++|.+++..... ..+++..+..++.|++.|++|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~- 192 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST- 192 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc-
Confidence 9999999999974321 23899999999999999999999764 34999999999999999999999999999865432
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ....+......
T Consensus 193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~------------- 257 (309)
T 3p86_A 193 -FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ-VVAAVGFKCKR------------- 257 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH-HHHHHHHSCCC-------------
T ss_pred -ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCC-------------
Confidence 122345678999999999999999999999999999999999999997653322 22222111111
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 258 -----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 258 -----LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred -----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 122334455789999999999999999999999999876554
No 58
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=372.26 Aligned_cols=267 Identities=25% Similarity=0.425 Sum_probs=216.0
Q ss_pred HhhcccccccccccceEEEEEEeC------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
.++|+..+.||+|+||.||+|+.. +++.||+|++...........+.+|+.++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 367889999999999999999763 34789999986554444556789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCC
Q 002010 765 LLLYEYMPNGSLGEMLHGAK----------------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKS 822 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp 822 (982)
++||||+++++|.+++.... ...+++.+++.++.||+.|++|||+.+ |+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCc
Confidence 99999999999999997532 157899999999999999999999998 99999999
Q ss_pred CcEEEcCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCC
Q 002010 823 NNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGD 901 (982)
Q Consensus 823 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 901 (982)
+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||++ |..||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999987654433333445678899999999998899999999999999999999 9999976433
Q ss_pred CchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCCCC
Q 002010 902 GVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLI 980 (982)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~~~ 980 (982)
. .....+.... ....+...+..+.+++.+||+.||++|||++|+++.|+++.+....-+
T Consensus 283 ~-~~~~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~~ 341 (343)
T 1luf_A 283 E-EVIYYVRDGN-------------------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTV 341 (343)
T ss_dssp H-HHHHHHHTTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC------
T ss_pred H-HHHHHHhCCC-------------------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhhc
Confidence 2 2222221111 112233445679999999999999999999999999999888765543
No 59
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.4e-41 Score=380.34 Aligned_cols=259 Identities=26% Similarity=0.386 Sum_probs=211.8
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|... +++.||||++...........+.+|+.++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 357889999999999999999775 6899999998654333344578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++|+|.+++.. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++...+...
T Consensus 193 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 9999999999973 2346899999999999999999999998 99999999999999999999999999986543211
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........+++.|+|||++.+..++.++|||||||++|||++ |..||...... .....+.....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~-------------- 333 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-QTREFVEKGGR-------------- 333 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-HHHHHHHTTCC--------------
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC--------------
Confidence 111122345778999999998899999999999999999999 99999765332 22222222111
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+..++..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 334 -----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 334 -----LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1123334567899999999999999999999999998654
No 60
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.7e-40 Score=361.02 Aligned_cols=266 Identities=29% Similarity=0.439 Sum_probs=211.6
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|.... .+|+|.++.... ....+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 3578889999999999999997633 689998754332 223467889999999999999999999765 566899999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++++|.+++.. ....+++.++..++.||+.|++|||+.+ |+||||||+||++++++.+||+|||++........
T Consensus 112 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 9999999999974 3467999999999999999999999998 99999999999999999999999999986553333
Q ss_pred cccccccccccccccccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 850 SECMSSVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
........||+.|+|||++. +..++.++||||+|+++|||++|+.||............+.....
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~------------ 255 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA------------ 255 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCC------------
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCC------------
Confidence 33445567999999999886 566899999999999999999999999876555444444333222
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCC
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPS 978 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~ 978 (982)
.+........++..+.+++.+||+.||++|||++|+++.|+.+....|.
T Consensus 256 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 256 ---SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp ---CCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred ---CcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 1222233344556899999999999999999999999999888776654
No 61
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-40 Score=368.86 Aligned_cols=267 Identities=23% Similarity=0.392 Sum_probs=216.4
Q ss_pred HhhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 763 (982)
.++|+..+.||+|+||.||+|.. .++..||+|++...........+.+|+.++.++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46899999999999999999975 246689999997655555667899999999999 89999999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCC
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKG---------------------GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKS 822 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp 822 (982)
.++||||+++|+|.+++..... ..+++..+..++.||+.|++|||+.+ |+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCh
Confidence 9999999999999999975432 24799999999999999999999998 99999999
Q ss_pred CcEEEcCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCC
Q 002010 823 NNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGD 901 (982)
Q Consensus 823 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 901 (982)
+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987765443334445667889999999999999999999999999999998 9999987665
Q ss_pred CchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCCC
Q 002010 902 GVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSL 979 (982)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~~ 979 (982)
.......+...... ..+...+..+.+++.+||+.||.+|||++|+++.|+.+....+++
T Consensus 281 ~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 281 DANFYKLIQNGFKM-------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp SHHHHHHHHTTCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred HHHHHHHHhcCCCC-------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 55444444332110 112233457899999999999999999999999999888776553
No 62
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.5e-39 Score=357.80 Aligned_cols=267 Identities=36% Similarity=0.602 Sum_probs=220.5
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEeccCC---CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEeccCC
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRG---TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPN 773 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 773 (982)
++.||+|+||.||+|.. +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 114 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114 (307)
T ss_dssp CCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCC
Confidence 48899999999999987 78899999985432 223456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCccc
Q 002010 774 GSLGEMLHGAK-GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASEC 852 (982)
Q Consensus 774 ~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 852 (982)
++|.+++.... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...........
T Consensus 115 ~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 191 (307)
T 2nru_A 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191 (307)
T ss_dssp CBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEE
T ss_pred CcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCCCcEEEeeccccccccccccccc
Confidence 99999997432 356999999999999999999999998 99999999999999999999999999987654333333
Q ss_pred ccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCC
Q 002010 853 MSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPR 932 (982)
Q Consensus 853 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (982)
.....|++.|+|||++.+ .++.++||||+|+++|+|++|..||...........+....... ...+...+++.
T Consensus 192 ~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 264 (307)
T 2nru_A 192 TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE------EKTIEDYIDKK 264 (307)
T ss_dssp CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTT------SCCHHHHSCSS
T ss_pred ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhh------hhhhhhhcccc
Confidence 445678999999998765 58999999999999999999999998765544444443332221 11223344555
Q ss_pred CCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 933 LSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 933 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
+...+...+..+.+++.+||+.||.+|||++|+++.|+++.+
T Consensus 265 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 265 MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 566778888899999999999999999999999999987754
No 63
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.3e-40 Score=354.43 Aligned_cols=258 Identities=23% Similarity=0.409 Sum_probs=213.6
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|+..++..||+|++... .....++.+|+.++++++||||+++++++.++...++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG--SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT--TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccC--CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 578899999999999999999888889999998543 234567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++++|.+++... ...+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+....... ..
T Consensus 86 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YV 160 (268)
T ss_dssp TTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EE
T ss_pred CCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh-hh
Confidence 999999999742 346899999999999999999999998 9999999999999999999999999998765432 22
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......+++.|+|||++.+..++.++||||+|+++|||++ |+.||............ .....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~~~~~---------------- 223 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV-SQGHR---------------- 223 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTTCC----------------
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH-HcCCC----------------
Confidence 2334556778999999998899999999999999999999 99999765433222221 11110
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 224 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 224 ---LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp ---CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ---CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 0112223447899999999999999999999999999987754
No 64
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.2e-41 Score=370.41 Aligned_cols=272 Identities=25% Similarity=0.340 Sum_probs=207.0
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc----cEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT----NLLL 767 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv 767 (982)
++|+..+.||+|+||.||+|+. .++.||||++... ......+.+|+.++++++||||+++++++..... .++|
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhchhhheecccCceEEEEEEE-CCCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 5789999999999999999987 4889999998432 2233455678999999999999999999987543 5999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc----------CCCcEEecCCCCCcEEEcCCCCEEEec
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD----------CSPLIIHRDVKSNNILLDSDFEAHVAD 837 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------~~~~ivHrDlkp~Nill~~~~~~kl~D 837 (982)
|||+++|+|.+++.. ..+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEcc
Confidence 999999999999964 3599999999999999999999987 7 99999999999999999999999
Q ss_pred cccchhccccCCccccccccccccccccccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHh
Q 002010 838 FGLAKFLQDAGASECMSSVAGSYGYIAPEYAYT-----LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 838 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 912 (982)
||+++.+.............||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+..... +....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-~~~~~ 253 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP-FEEEI 253 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT-THHHH
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc-hhhhh
Confidence 999987765443333445679999999999886 356678999999999999999999997643321110 00000
Q ss_pred ccCCCCCCcc-cccceeecCCCCC--CChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 913 TSEVSQPSDA-ASVLAVVDPRLSG--YPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 913 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...... ........+.... .....+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0000000000 0000011111111 12345667999999999999999999999999998654
No 65
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=363.45 Aligned_cols=255 Identities=26% Similarity=0.451 Sum_probs=209.5
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
++|+..+.||+|+||+||+|.. .+++.||+|++.. ......+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 5788999999999999999976 4689999998833 3344566789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
+++++|.+++... ...+++.++..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++..+......
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999743 467999999999999999999999998 999999999999999999999999999876433211
Q ss_pred c------------cccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCch-----HHHHHHHhc
Q 002010 851 E------------CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVD-----IVRWVRKTT 913 (982)
Q Consensus 851 ~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-----~~~~~~~~~ 913 (982)
. ......||+.|+|||++.+..++.++||||+|+++|||++|..|+........ .......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-- 242 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH--
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc--
Confidence 1 11245799999999999999999999999999999999999999875322211 1111110
Q ss_pred cCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 914 SEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..+...+..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 243 ---------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 243 ---------------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp ---------------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1122233468899999999999999999999999987643
No 66
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.2e-39 Score=374.48 Aligned_cols=364 Identities=21% Similarity=0.195 Sum_probs=276.5
Q ss_pred ccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhc
Q 002010 85 GSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEI 164 (982)
Q Consensus 85 g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l 164 (982)
+..+..++.+++|++|++++|++++. | .+..+++|++|+|++|.+++. + +..+++|++|++++|++++. | +
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~---~~~l~~L~~L~Ls~N~l~~~-~--~ 102 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D---LSQNTNLTYLACDSNKLTNL-D--V 102 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSCC-C--C
T ss_pred cccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c---cccCCCCCEEECcCCCCcee-e--c
Confidence 34445677888888888888888864 5 688888888888888888764 2 56788888888888888864 3 7
Q ss_pred cccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCC
Q 002010 165 ASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQ 244 (982)
Q Consensus 165 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~ 244 (982)
+++++|++|+|++|++++. | ++.+++|++|++++|.+.+. .++.+++|+
T Consensus 103 ~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l----------------------------~l~~l~~L~ 151 (457)
T 3bz5_A 103 TPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI----------------------------DVSHNTQLT 151 (457)
T ss_dssp TTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC----------------------------CCTTCTTCC
T ss_pred CCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee----------------------------ccccCCcCC
Confidence 8888888888888888863 3 78888888888888776521 156677788
Q ss_pred EEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCC
Q 002010 245 VLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNN 324 (982)
Q Consensus 245 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 324 (982)
+|++++|+..+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|++++|+
T Consensus 152 ~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~ 223 (457)
T 3bz5_A 152 ELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNK 223 (457)
T ss_dssp EEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSC
T ss_pred EEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCc
Confidence 8888888655555 47778888888888888886 33 77778888888888888864 37777888888888888
Q ss_pred CCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCcc
Q 002010 325 LRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEE 404 (982)
Q Consensus 325 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~ 404 (982)
+++ +| ++.+++|+.|++++|++++.. ++.+++|+.|+++.|+ |+.|++++|.+.+.+|
T Consensus 224 l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~-- 281 (457)
T 3bz5_A 224 LTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ-- 281 (457)
T ss_dssp CSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--
T ss_pred ccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--
Confidence 886 45 777888888888888888643 4556777778777664 4567888888777776
Q ss_pred ccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcce
Q 002010 405 LGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNI 484 (982)
Q Consensus 405 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 484 (982)
++.+++|+.|++++|...+.+|. ..+.|+.|++++| ++|++|++++|++++. + ++.+++|+.
T Consensus 282 ~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~ 343 (457)
T 3bz5_A 282 AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN------------PKLVYLYLNNTELTEL-D--VSHNTKLKS 343 (457)
T ss_dssp CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC------------TTCCEEECTTCCCSCC-C--CTTCTTCSE
T ss_pred ccccccCCEEECCCCcccceecc---CCCcceEechhhc------------ccCCEEECCCCccccc-c--cccCCcCcE
Confidence 46788888888888888877774 3456677777766 4688888888888874 3 788888888
Q ss_pred eeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccc
Q 002010 485 LSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGIS 549 (982)
Q Consensus 485 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 549 (982)
|++++|++++ ++.|..|++++|+++|. ..+..|+.+++++|+++|.+|..+.
T Consensus 344 L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 344 LSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp EECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred EECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 8888888874 35677778888888865 3566788888888888888887653
No 67
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-40 Score=355.11 Aligned_cols=256 Identities=25% Similarity=0.443 Sum_probs=212.6
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|...+++.||+|++... ....+.+.+|+.++++++||||+++++++.++...++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc--ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 578889999999999999999888999999998543 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 162 (269)
T 4hcu_A 88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYT 162 (269)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHH
T ss_pred CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccc-ccc
Confidence 99999999974 3457899999999999999999999998 999999999999999999999999999876532 122
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+.....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~~~~~~~---------------- 225 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTGFR---------------- 225 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCC----------------
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHhcCcc----------------
Confidence 2334556788999999998999999999999999999999 999997643322 2222211111
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 226 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 226 ---LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 01122234578999999999999999999999999987543
No 68
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.1e-40 Score=364.23 Aligned_cols=266 Identities=23% Similarity=0.385 Sum_probs=221.5
Q ss_pred HhhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 763 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++.........+.+.+|+.+++++ +||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35789999999999999999964 346789999986554444557789999999999 99999999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKG----------------GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL 827 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill 827 (982)
.++||||+++|+|.+++..... ..+++..++.++.|++.|++|||+.+ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 9999999999999999975432 25899999999999999999999998 9999999999999
Q ss_pred cCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHH
Q 002010 828 DSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIV 906 (982)
Q Consensus 828 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 906 (982)
+.++.+||+|||++................+++.|+|||++.+..++.++||||+|+++|||++ |..||..........
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 258 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH
Confidence 9999999999999987765433333445567889999999999999999999999999999999 999998765555444
Q ss_pred HHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCC
Q 002010 907 RWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPS 978 (982)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~ 978 (982)
..+...... ..+...+..+.+++.+||+.||.+|||++|+++.|+++.+..+.
T Consensus 259 ~~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 311 (313)
T 1t46_A 259 KMIKEGFRM-------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311 (313)
T ss_dssp HHHHHTCCC-------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred HHhccCCCC-------------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence 444332221 11223345789999999999999999999999999877655544
No 69
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=373.02 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=213.7
Q ss_pred hhcccccccccccceEEEEEEeC------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
++|+..+.||+|+||.||+|... +++.||||++...........+.+|+.++++++||||+++++++..+...+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 57889999999999999999742 467899999865545555667899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC---CEEEec
Q 002010 766 LLYEYMPNGSLGEMLHGAK-----GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF---EAHVAD 837 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~D 837 (982)
+||||+++|+|.+++.... ...+++.+++.++.||+.|++|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997532 246899999999999999999999998 99999999999999554 599999
Q ss_pred cccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCC
Q 002010 838 FGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEV 916 (982)
Q Consensus 838 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 916 (982)
||+++.+.............+|+.|+|||++.+..++.++||||+||++|||++ |..||..... ......+.....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-~~~~~~i~~~~~-- 304 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGR-- 304 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCC--
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCC--
Confidence 999987654444444455678999999999999999999999999999999998 9999976433 222222222111
Q ss_pred CCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 917 SQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||++||++.|+.+.
T Consensus 305 -----------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 305 -----------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp -----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1122334457899999999999999999999999986543
No 70
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.8e-40 Score=358.81 Aligned_cols=263 Identities=26% Similarity=0.369 Sum_probs=209.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC--CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG--GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 5799999999999999999965 56899999998544332 23457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999973 357999999999999999999999998 9999999999999999999999999998765332
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||.................. .
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---~---------- 231 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP---N---------- 231 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC---C----------
T ss_pred -ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC---C----------
Confidence 22234467899999999999999999999999999999999999999764332222221111000 0
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-CHHHHHHHhcCCCCCC
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-TMREVVHMLANPPQSA 976 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~ell~~L~~~~~~~ 976 (982)
.....+...+..+.+++.+||+.||++|| +++++.+.|+.+....
T Consensus 232 ---~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 232 ---VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp ---HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred ---cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 00012233456789999999999999999 9999999998876643
No 71
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.4e-40 Score=362.51 Aligned_cols=248 Identities=23% Similarity=0.268 Sum_probs=207.1
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5789999999999999999976 468999999985432 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++|+|.+++. +...+++..+..++.||+.|++|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 85 EYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp ECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 9999999999997 3457899999999999999999999998 999999999999999999999999999754322
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 159 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~-------------- 222 (337)
T 1o6l_A 159 -GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEI-------------- 222 (337)
T ss_dssp -TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC--------------
T ss_pred -CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-HHHHHHHcCCC--------------
Confidence 22345578999999999999999999999999999999999999999764322 22222211111
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-----TMREVVH 967 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~ 967 (982)
.++...+..+.+++.+||+.||++|| +++|+++
T Consensus 223 ------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 ------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11223345789999999999999999 8999876
No 72
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-39 Score=365.01 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=208.6
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC-----chhhHHHHHHHHhcCCCCcccceEeEEEcCC
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG-----NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD 762 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 762 (982)
.+.+.|+..+.||+|+||.||+|.. .+|+.||+|.+....... ....+.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 88 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT 88 (361)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence 3457899999999999999999975 468999999996554322 3467899999999999999999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC----CEEEecc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF----EAHVADF 838 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~Df 838 (982)
..++||||+++|+|.+++. +...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999996 4567999999999999999999999998 99999999999998876 7999999
Q ss_pred ccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC
Q 002010 839 GLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ 918 (982)
Q Consensus 839 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 918 (982)
|++...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...........+ .......
T Consensus 164 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i-~~~~~~~-- 237 (361)
T 2yab_A 164 GLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDF-- 237 (361)
T ss_dssp SSCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-HTTCCCC--
T ss_pred CCceEcCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhcCCCC--
Confidence 999876542 2234567999999999999999999999999999999999999999764332222222 1111000
Q ss_pred CCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 919 PSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~--------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 238 DE--------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CH--------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cc--------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 001122346889999999999999999999985
No 73
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.3e-39 Score=354.45 Aligned_cols=269 Identities=22% Similarity=0.334 Sum_probs=207.7
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
++|+..+.||+|+||+||+|+..+++.||+|++..... ......+.+|+.++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46889999999999999999887899999999854432 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
+++ +|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP--V 154 (288)
T ss_dssp CSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc--c
Confidence 975 99998874 3367899999999999999999999998 999999999999999999999999999876432 1
Q ss_pred ccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 851 ECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.................................
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 223445789999999998764 5899999999999999999999999876544444444433322211111100101111
Q ss_pred cCCCC--------CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 930 DPRLS--------GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 930 ~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
++.+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111 122334567889999999999999999999985
No 74
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=374.38 Aligned_cols=260 Identities=25% Similarity=0.388 Sum_probs=215.7
Q ss_pred hhcccccccccccceEEEEEEe--------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCC
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM--------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRD 762 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 762 (982)
++|+..+.||+|+||.||+|.. ..+..||+|++...........+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 5788999999999999999964 224579999986655445557789999999999 8999999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAK--------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD 828 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~ 828 (982)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEc
Confidence 9999999999999999997543 246999999999999999999999998 99999999999999
Q ss_pred CCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHH
Q 002010 829 SDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVR 907 (982)
Q Consensus 829 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 907 (982)
.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |..||..... .....
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~ 304 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFK 304 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH
Confidence 999999999999987664433344445667889999999999999999999999999999999 9999976432 22233
Q ss_pred HHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 908 WVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
.+..... ...+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 305 ~~~~~~~-------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 305 LLKEGHR-------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HHHTTCC-------------------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCC-------------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2222111 11122344578999999999999999999999999977654
No 75
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-40 Score=372.62 Aligned_cols=261 Identities=27% Similarity=0.391 Sum_probs=215.5
Q ss_pred HhhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 763 (982)
.++|+..+.||+|+||.||+|++ .+++.||||++.........+.+.+|+.++.++ +||||+++++++.+++.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 46799999999999999999963 346789999996554444556789999999999 78999999999887654
Q ss_pred -cEEEEeccCCCCHHHHhhcCCC---------------------------------------------------------
Q 002010 764 -NLLLYEYMPNGSLGEMLHGAKG--------------------------------------------------------- 785 (982)
Q Consensus 764 -~~lv~e~~~~~sL~~~l~~~~~--------------------------------------------------------- 785 (982)
.++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 8999999999999999975432
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCccccccccc
Q 002010 786 -------GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAG 858 (982)
Q Consensus 786 -------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~g 858 (982)
..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++................|
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 12889999999999999999999998 99999999999999999999999999987654444444456678
Q ss_pred ccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCCCCC
Q 002010 859 SYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYP 937 (982)
Q Consensus 859 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (982)
|+.|+|||++.+..++.++||||+|+++|||++ |+.||............+...... ..+
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-------------------~~~ 318 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-------------------RAP 318 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC-------------------CCC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC-------------------CCC
Confidence 999999999999999999999999999999998 999998765555444444432221 112
Q ss_pred hHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 938 LTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 938 ~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 319 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 233457899999999999999999999999998654
No 76
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.4e-40 Score=380.71 Aligned_cols=259 Identities=25% Similarity=0.447 Sum_probs=215.2
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|...++..||||++... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC--CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 568888999999999999999888899999998543 245678999999999999999999999886 66789999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YT 340 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-ee
Confidence 9999999997544457899999999999999999999998 9999999999999999999999999998765321 12
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......+++.|+|||++....++.++|||||||++|||++ |+.||...... .....+..... .
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-~~~~~i~~~~~-~-------------- 404 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRALERGYR-M-------------- 404 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHHTCC-C--------------
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC-C--------------
Confidence 2233456789999999998899999999999999999999 99999765432 22222222111 0
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCC
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAP 977 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~ 977 (982)
..+..++..+.++|.+||+.||++|||+++|++.|+.+.....
T Consensus 405 ----~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 405 ----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 1123445679999999999999999999999999999876543
No 77
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.3e-40 Score=362.62 Aligned_cols=260 Identities=23% Similarity=0.367 Sum_probs=215.3
Q ss_pred HhhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
.++|+..+.||+|+||.||+|.. .++..||+|++.........+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 36789999999999999999964 345789999986554444556789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCC
Q 002010 765 LLLYEYMPNGSLGEMLHGAKG----------------------GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKS 822 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp 822 (982)
++||||+++++|.+++..... ..+++.++..++.||+.|++|||+.+ |+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence 999999999999999975432 34889999999999999999999998 99999999
Q ss_pred CcEEEcCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCC
Q 002010 823 NNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGD 901 (982)
Q Consensus 823 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 901 (982)
+||+++.++.+||+|||++................+++.|+|||++.+..++.++||||+|+++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654433333344567889999999999889999999999999999999 9999976543
Q ss_pred CchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 902 GVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
. .....+..... ...+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 259 ~-~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 259 E-RLFNLLKTGHR-------------------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp G-GHHHHHHTTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H-HHHHHhhcCCc-------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3 22333222111 1122334457899999999999999999999999987654
No 78
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.6e-40 Score=371.67 Aligned_cols=259 Identities=28% Similarity=0.464 Sum_probs=200.7
Q ss_pred HhhcccccccccccceEEEEEEeC----CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP----DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+.. ++..||||++.........+.+.+|+.++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999764 5778999998654444455679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.++++. ....+++.++..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 9999999999999974 3457999999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 847 AGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 847 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
.... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+.....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-~~~~~i~~~~~---------- 268 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYR---------- 268 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-HHHHHHHTTEE----------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC----------
Confidence 3211 11122345778999999999999999999999999999998 99999765332 22222221111
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++||+++|+++.|+.+.
T Consensus 269 ---------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 269 ---------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ---------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 0112234567899999999999999999999999987653
No 79
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.6e-39 Score=354.77 Aligned_cols=271 Identities=21% Similarity=0.288 Sum_probs=211.4
Q ss_pred HHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.++|+..+.||+|+||+||+|...+++.||+|++...... .....+.+|+.++++++||||+++++++.++...++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 45789999999999999999998888999999998544332 23467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++ +|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~- 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP- 172 (311)
T ss_dssp ECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSC-
T ss_pred cCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCC-
Confidence 99974 88888864 3456999999999999999999999998 999999999999999999999999999876432
Q ss_pred Cccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc-
Q 002010 849 ASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL- 926 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 926 (982)
........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....+......+........+.........
T Consensus 173 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 173 -VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp -CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred -cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 222344678999999999876 56899999999999999999999999887666665555554443222111110000
Q ss_pred eeecCCCC--------CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLS--------GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+.... ........++.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 111223457889999999999999999999987
No 80
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.3e-39 Score=355.02 Aligned_cols=248 Identities=23% Similarity=0.336 Sum_probs=205.6
Q ss_pred hcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 693 SLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 693 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
.|+..+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR-KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-TCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 4667778999999999999765 7999999998543 3445667889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++++|.+++. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 125 ~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 196 (321)
T 2c30_A 125 QGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--P 196 (321)
T ss_dssp CSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--C
T ss_pred CCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCc--c
Confidence 9999999985 346999999999999999999999988 9999999999999999999999999998765322 2
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecC
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDP 931 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (982)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+..... +
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~----------------~ 259 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAMKRLRDSPP----------------P 259 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSSC----------------C
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCC----------------C
Confidence 234567999999999999999999999999999999999999999764322 22222221111 0
Q ss_pred CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 932 RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 932 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.. ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 260 ~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 260 KL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 011233457889999999999999999999987
No 81
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.6e-39 Score=357.10 Aligned_cols=279 Identities=21% Similarity=0.300 Sum_probs=200.9
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++...........+.+|+.++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 35788899999999999999975 46899999999665555556778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 770 YMPNGSLGEMLHGA----KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 770 ~~~~~sL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
|++ ++|.+++... ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 5999988642 2246899999999999999999999998 9999999999999999999999999998664
Q ss_pred ccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
.. ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+......+................
T Consensus 160 ~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IP--VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SC--CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CC--cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 32 122345678999999999876 468999999999999999999999998765444443333332221111100000
Q ss_pred cceeecCCCC-------------CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCCCC
Q 002010 925 VLAVVDPRLS-------------GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPPQS 975 (982)
Q Consensus 925 ~~~~~~~~~~-------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~~~ 975 (982)
......+... ..+...+..+.+++.+||+.||++|||++|+++ .+.+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 0000111110 011123457899999999999999999999986 34444433
No 82
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.5e-40 Score=362.68 Aligned_cols=257 Identities=25% Similarity=0.421 Sum_probs=203.8
Q ss_pred hhcccccccccccceEEEEEEe-CCCc----EEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGI----DVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
++|+..+.||+|+||+||+|.. .+++ +||+|.+.........+.+.+|+.++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 5688999999999999999975 3444 468888765555566778999999999999999999999998754 788
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
|+||+++|+|.+++... ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999753 467999999999999999999999998 99999999999999999999999999998765
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
...........+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+..... .
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~-~--------- 238 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILEKGER-L--------- 238 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCC-C---------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-HHHHHHHcCCC-C---------
Confidence 443333445567889999999999999999999999999999999 99999765432 33333322211 0
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
..+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 239 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 239 ---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ---------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 122334457899999999999999999999999886543
No 83
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=355.14 Aligned_cols=274 Identities=20% Similarity=0.249 Sum_probs=215.8
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC--ccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD--TNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 768 (982)
++|+..+.||+|+||+||+|... +++.||||++...........+.+|+.++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57899999999999999999764 589999999865544555677889999999999999999999988765 669999
Q ss_pred eccCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE----cCCCCEEEeccccchh
Q 002010 769 EYMPNGSLGEMLHGAKG-GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL----DSDFEAHVADFGLAKF 843 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~ 843 (982)
||+++++|.+++..... ..+++..+..++.||+.|++|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999975332 34999999999999999999999998 9999999999999 7788899999999987
Q ss_pred ccccCCcccccccccccccccccccc--------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccC
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAY--------TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
..... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...................
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 65432 234467899999999876 5678999999999999999999999998655443333333322221
Q ss_pred CCCCC--ccc---ccceeecCCCC---CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcC
Q 002010 916 VSQPS--DAA---SVLAVVDPRLS---GYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLAN 971 (982)
Q Consensus 916 ~~~~~--~~~---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~ 971 (982)
.+... ... ...-.+.+.++ ..+...+..+.+++.+||+.||++|||++|+++-..+
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 11100 000 00001111222 4567778889999999999999999999999987643
No 84
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=357.16 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=209.1
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC-----chhhHHHHHHHHhcCCCCcccceEeEEEcC
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG-----NDHGFLAEIQTLGRIRHRNIVRLLGYVSNR 761 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 761 (982)
+.+.+.|+..+.||+|+||.||+|.. .+++.||+|++....... ....+.+|+.++++++||||+++++++.++
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 34567899999999999999999976 468999999986543321 356789999999999999999999999999
Q ss_pred CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC----CEEEec
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF----EAHVAD 837 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~D 837 (982)
...++||||+++++|.+++. +...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred CEEEEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999999999996 4467999999999999999999999998 99999999999999887 899999
Q ss_pred cccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 838 FGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 838 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
||++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........... +.......
T Consensus 162 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-~~~~~~~~- 236 (326)
T 2y0a_A 162 FGLAHKIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEF- 236 (326)
T ss_dssp CTTCEECCTT---SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-HHHTCCCC-
T ss_pred CCCCeECCCC---CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-HHhcCCCc-
Confidence 9999876532 223456799999999999999999999999999999999999999976433222222 21111100
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 237 -~~--------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 237 -ED--------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -CH--------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -Cc--------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 001123356889999999999999999999987
No 85
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2e-39 Score=353.20 Aligned_cols=262 Identities=29% Similarity=0.448 Sum_probs=202.8
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|.... .||+|++..... ....+.+.+|+.++++++||||++++++. .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3579999999999999999997633 699999854432 23346788999999999999999999965 5667899999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 9999999999963 3467999999999999999999999998 99999999999999999999999999987654333
Q ss_pred cccccccccccccccccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 850 SECMSSVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
........||+.|+|||++. +..++.++||||+|+++|||++|+.||............+......
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------- 244 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS----------- 244 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC-----------
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC-----------
Confidence 33345567999999999986 5678899999999999999999999998766655555544433221
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
+.....+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 245 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 ----PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp ----CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ----cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11222334455689999999999999999999999999998765
No 86
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.1e-39 Score=379.32 Aligned_cols=259 Identities=24% Similarity=0.370 Sum_probs=217.6
Q ss_pred hhcccccccccccceEEEEEEeCC-CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPD-GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
++|+..+.||+|+||.||+|.... +..||||.+... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc--ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 468888999999999999997654 889999998543 33467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
+++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TY 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC-CE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC-ce
Confidence 99999999998766677999999999999999999999998 999999999999999999999999999876532 22
Q ss_pred ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 851 ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||...... .....+.....
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~--------------- 437 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYR--------------- 437 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCC---------------
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC---------------
Confidence 22334456789999999998899999999999999999999 99999765432 23333222111
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
...+..++..+.++|.+||+.||++|||++||++.|+.+.+..
T Consensus 438 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 438 ----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred ----CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 1123345568899999999999999999999999999987653
No 87
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-39 Score=354.01 Aligned_cols=256 Identities=22% Similarity=0.383 Sum_probs=209.6
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
.++|+..+.||+|+||.||+|+..++..||+|++... ....+++.+|+.++++++||||+++++++.+....++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC--CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3578999999999999999999888889999998543 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 175 (283)
T 3gen_A 101 MANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-Y 175 (283)
T ss_dssp CTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-H
T ss_pred cCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc-c
Confidence 9999999999742 356999999999999999999999998 9999999999999999999999999998765321 1
Q ss_pred ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 851 ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......... ..+.....
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~-~~~~~~~~--------------- 239 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-EHIAQGLR--------------- 239 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTCC---------------
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH-HHHhcccC---------------
Confidence 22234456788999999998899999999999999999998 99999865433222 22211111
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 240 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 240 ----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp ----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 0112223457889999999999999999999999987654
No 88
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9e-39 Score=345.70 Aligned_cols=255 Identities=23% Similarity=0.291 Sum_probs=211.8
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.++|+..+.||+|+||.||+|... +++.||+|++...........+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 5678999999999999999999764 689999999865555555678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+..+....
T Consensus 85 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999999996 4467999999999999999999999998 9999999999999999999999999998765433
Q ss_pred CcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.........|++.|+|||++.+..+ +.++||||+|+++|||++|+.||....................
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------- 228 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL----------- 228 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS-----------
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc-----------
Confidence 3333455678999999999987765 7899999999999999999999987544332222221111100
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+++.+||+.||++|||++|+++
T Consensus 229 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 -------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011223457889999999999999999999986
No 89
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.6e-39 Score=373.12 Aligned_cols=253 Identities=29% Similarity=0.415 Sum_probs=209.9
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC-ccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD-TNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|.. .++.||||++... ...+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSC---TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCc---hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 35788899999999999999987 5789999998543 24567999999999999999999999987665 6899999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 999999999998655556899999999999999999999998 999999999999999999999999999854321
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+.....
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-~~~i~~~~~-------------- 404 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-VPRVEKGYK-------------- 404 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH-HHHHHTTCC--------------
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCCC--------------
Confidence 122356889999999999999999999999999999999 9999987544332 222222111
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
...+..++..+.++|.+||+.||++|||++|+++.|+.+...
T Consensus 405 -----~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 405 -----MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 112334556899999999999999999999999999876543
No 90
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-39 Score=361.33 Aligned_cols=261 Identities=24% Similarity=0.400 Sum_probs=213.4
Q ss_pred HhhcccccccccccceEEEEEEe--------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcC
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM--------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNR 761 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 761 (982)
.++|+..+.||+|+||.||+|.. .++..||+|++...........+.+|+.+++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 36799999999999999999975 346789999986554444556788999999999 899999999999999
Q ss_pred CccEEEEeccCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAKG--------------GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL 827 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill 827 (982)
+..++||||+++++|.+++..... ..+++..++.++.||+.|++|||+.+ |+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence 999999999999999999975432 35899999999999999999999998 9999999999999
Q ss_pred cCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHH
Q 002010 828 DSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIV 906 (982)
Q Consensus 828 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 906 (982)
+.++.+||+|||++................+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~ 269 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EELF 269 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-HHHH
Confidence 9999999999999987654433333344567889999999998889999999999999999999 9999976432 2222
Q ss_pred HHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 907 RWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..+..... ...+...+..+.+++.+||+.||.+|||++|+++.|+++.+
T Consensus 270 ~~~~~~~~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 270 KLLKEGHR-------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcCCC-------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22222111 11222344578999999999999999999999999987644
No 91
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=358.17 Aligned_cols=251 Identities=20% Similarity=0.238 Sum_probs=206.4
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 46899999999999999999965 46889999988432 3344568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC--CCCEEEeccccchhcccc
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS--DFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~ 847 (982)
|+++++|.+++.. ....+++.++..++.||+.|++|||+.+ |+||||||+||+++. ++.+||+|||++..+...
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 82 FISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 9999999999963 3357999999999999999999999998 999999999999987 789999999999876533
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.......||+.|+|||++.+..++.++||||+||++|+|++|..||...........+. ........
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-~~~~~~~~--------- 224 (321)
T 1tki_A 158 ---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM-NAEYTFDE--------- 224 (321)
T ss_dssp ---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-HTCCCCCH---------
T ss_pred ---CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH-cCCCCCCh---------
Confidence 22345678999999999998889999999999999999999999997644332222222 11110000
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+++.+||+.||++|||++|+++
T Consensus 225 -------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 225 -------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000123457889999999999999999999987
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=368.89 Aligned_cols=256 Identities=20% Similarity=0.257 Sum_probs=208.2
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
..+.++|+..+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++.+++..+
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 34668899999999999999999964 5789999999855432 223456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc---CCCCEEEeccccch
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD---SDFEAHVADFGLAK 842 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~ 842 (982)
+||||+++|+|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++ .++.+||+|||++.
T Consensus 87 lv~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999999974 457999999999999999999999998 99999999999998 46889999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
..... ........||+.|+|||++.+..++.++||||+||++|+|++|.+||....... ....+.......+.+
T Consensus 162 ~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~--- 235 (444)
T 3soa_A 162 EVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSP--- 235 (444)
T ss_dssp CCCTT--CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCCTT---
T ss_pred EecCC--CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCCCCCCcc---
Confidence 76533 223345689999999999999999999999999999999999999997643322 222222222111110
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. ....+..+.+++.+||+.||++|||++|+++
T Consensus 236 ---------~----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 236 ---------E----WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ---------T----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---------c----cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 1123457889999999999999999999987
No 93
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=359.74 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=206.3
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++|||||++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 46799999999999999999965 458899999985432 234456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++. +...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||++..+...
T Consensus 94 ~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 99999999999997 4567999999999999999999999998 999999999999999999999999999876532
Q ss_pred CCccccccccccccccccccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ..........
T Consensus 169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~~~~~~~~--------- 235 (384)
T 4fr4_A 169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETT--------- 235 (384)
T ss_dssp ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-HHHHHHHHHC---------
T ss_pred ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-HHHHHHHhhc---------
Confidence 23456789999999999874 4589999999999999999999999975433221 1222111110
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPT-MREVVH 967 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~ell~ 967 (982)
...++...+..+.+++.+||+.||.+||+ ++++.+
T Consensus 236 --------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 --------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01122334457899999999999999998 677664
No 94
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-39 Score=354.57 Aligned_cols=246 Identities=24% Similarity=0.312 Sum_probs=206.0
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|+. .+|+.||+|++.... .......+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 35789999999999999999976 469999999985432 223456678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 999999999999973 457999999999999999999999988 99999999999999999999999999986542
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...........+.....
T Consensus 159 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-------------- 220 (318)
T 1fot_A 159 ----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-------------- 220 (318)
T ss_dssp ----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC--------------
T ss_pred ----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------
Confidence 12356799999999999999999999999999999999999999976433222222221110
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-----TMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~ 967 (982)
.++...+..+.+++.+|++.||++|| +++|+++
T Consensus 221 -------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 -------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11222345788999999999999999 8999885
No 95
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-39 Score=360.84 Aligned_cols=257 Identities=26% Similarity=0.433 Sum_probs=207.2
Q ss_pred hhcccccccccccceEEEEEEe-CCCcE----EEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGID----VAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
++|+..+.||+|+||.||+|.. .+++. ||+|.+...........+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4688899999999999999975 34443 78888755544555567889999999999999999999886 566889
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999743 357899999999999999999999998 99999999999999999999999999998765
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
...........+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+..... ..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~-~~-------- 237 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-VPDLLEKGER-LA-------- 237 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH-HHHHHHTTCB-CC--------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH-HHHHHHcCCC-CC--------
Confidence 544444455678889999999999999999999999999999999 999998754332 2333322211 11
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
.+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 238 ----------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 238 ----------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp ----------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred ----------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11122335779999999999999999999999987654
No 96
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.6e-39 Score=376.19 Aligned_cols=258 Identities=30% Similarity=0.455 Sum_probs=208.4
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|...++..||||++.... ...+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 5688889999999999999998788889999985432 345679999999999999999999999876 6789999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+||++++++.+||+|||+++...... ..
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCc-ee
Confidence 9999999997544456899999999999999999999998 9999999999999999999999999998765332 22
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-~~~~~i~~~~~---------------- 399 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYR---------------- 399 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCC----------------
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC----------------
Confidence 2234456789999999998999999999999999999999 99999765332 22222221111
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
...+..++..+.++|.+||+.||++|||++++++.|+.+....
T Consensus 400 ---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 1123345567899999999999999999999999999886644
No 97
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.6e-39 Score=360.36 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=207.7
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.+.++|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4567899999999999999999965 4689999999865432 2234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC---CCEEEeccccchh
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD---FEAHVADFGLAKF 843 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~ 843 (982)
||||+++++|.+++. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.+ +.+||+|||++..
T Consensus 106 v~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 106 VFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EECCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999999999999996 4467999999999999999999999998 9999999999999865 4599999999987
Q ss_pred ccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|++||...... .....+.......+.+
T Consensus 181 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~---- 252 (362)
T 2bdw_A 181 VNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSP---- 252 (362)
T ss_dssp CTTC---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTT----
T ss_pred ecCC---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcc----
Confidence 6532 2234567999999999999999999999999999999999999999764332 2222222211111100
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 253 ------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 253 ------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ------------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01123457889999999999999999999875
No 98
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-38 Score=368.43 Aligned_cols=368 Identities=17% Similarity=0.174 Sum_probs=242.4
Q ss_pred ccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCccccc
Q 002010 103 SNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTG 182 (982)
Q Consensus 103 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 182 (982)
......+..+..++.+++|++|++++|.+++. + .+..+++|++|+|++|++++. | ++.+++|++|+|++|++++
T Consensus 26 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~ 99 (457)
T 3bz5_A 26 AAFEMQATDTISEEQLATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN 99 (457)
T ss_dssp HHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC
T ss_pred HhcCcCcccccChhHcCCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce
Confidence 34455566667788888888888888888764 3 367788888888888888863 4 7788888888888888876
Q ss_pred ccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhc
Q 002010 183 KIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLS 262 (982)
Q Consensus 183 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 262 (982)
. | ++++++|++|++++|.+.+ +| ++.+++|++|++++|++++. + ++
T Consensus 100 ~-~--~~~l~~L~~L~L~~N~l~~--------------------------l~--~~~l~~L~~L~l~~N~l~~l-~--l~ 145 (457)
T 3bz5_A 100 L-D--VTPLTKLTYLNCDTNKLTK--------------------------LD--VSQNPLLTYLNCARNTLTEI-D--VS 145 (457)
T ss_dssp C-C--CTTCTTCCEEECCSSCCSC--------------------------CC--CTTCTTCCEEECTTSCCSCC-C--CT
T ss_pred e-e--cCCCCcCCEEECCCCcCCe--------------------------ec--CCCCCcCCEEECCCCcccee-c--cc
Confidence 4 2 6677777777777665541 12 55666777777777777753 2 66
Q ss_pred CCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEE
Q 002010 263 RLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVL 342 (982)
Q Consensus 263 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 342 (982)
++++|++|++++|+..+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|++|
T Consensus 146 ~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L 217 (457)
T 3bz5_A 146 HNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFL 217 (457)
T ss_dssp TCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEE
T ss_pred cCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEE
Confidence 6677777777777544444 35666677777777777664 33 55566666666666666643 25556666666
Q ss_pred EccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccC
Q 002010 343 QVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLN 422 (982)
Q Consensus 343 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 422 (982)
++++|++++ +| ++.+++|+.|++++|++++.. ++.+++|+.|++++|+
T Consensus 218 ~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---------------------------~~~l~~L~~L~l~~n~-- 265 (457)
T 3bz5_A 218 DCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---------------------------VSTLSKLTTLHCIQTD-- 265 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---------------------------CTTCTTCCEEECTTCC--
T ss_pred ECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---------------------------HHHCCCCCEEeccCCC--
Confidence 666666664 33 555555555555555555432 2234444444444432
Q ss_pred CCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCcccccc
Q 002010 423 GTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFN 502 (982)
Q Consensus 423 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 502 (982)
|+.|++++|.+.+.+|. ....+|+.|++++|.+.+.+|. ..++|+.|++++|
T Consensus 266 ------------L~~L~l~~n~~~~~~~~-~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~------------ 317 (457)
T 3bz5_A 266 ------------LLEIDLTHNTQLIYFQA-EGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN------------ 317 (457)
T ss_dssp ------------CSCCCCTTCTTCCEEEC-TTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC------------
T ss_pred ------------CCEEECCCCccCCcccc-cccccCCEEECCCCcccceecc---CCCcceEechhhc------------
Confidence 23444455544444431 1224566666666665555553 3456666666655
Q ss_pred ccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceec
Q 002010 503 LKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLD 582 (982)
Q Consensus 503 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 582 (982)
++|++|++++|+|++. + ++.+++|+.|++++|+|++ ++.|..|++++|+++|. ..+..|..++
T Consensus 318 -~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~ 380 (457)
T 3bz5_A 318 -PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKET 380 (457)
T ss_dssp -TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBC
T ss_pred -ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccc
Confidence 5788888888888874 3 8889999999999999985 24677778999999876 3567788899
Q ss_pred ccCCccccCCCCC
Q 002010 583 LSYNNLIGNIPSG 595 (982)
Q Consensus 583 Ls~N~l~~~ip~~ 595 (982)
+++|+++|.||..
T Consensus 381 l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 381 LTNNSLTIAVSPD 393 (457)
T ss_dssp CBTTBEEEECCTT
T ss_pred cccCcEEEEcChh
Confidence 9999999999864
No 99
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=364.94 Aligned_cols=249 Identities=21% Similarity=0.269 Sum_probs=201.5
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+. .+++.||||++.... .......+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46799999999999999999975 468999999985431 223455678899999988 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+|+....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999973 457999999999999999999999998 99999999999999999999999999975432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+... ..
T Consensus 177 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~------------ 241 (353)
T 3txo_A 177 N--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND-EV------------ 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CC------------
T ss_pred C--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CC------------
Confidence 2 22344568999999999999989999999999999999999999999765333222222211 11
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTM------REVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~ell~ 967 (982)
.++...+..+.+++.+||++||.+||++ +|+++
T Consensus 242 --------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 --------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122234578899999999999999998 77765
No 100
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.7e-39 Score=368.59 Aligned_cols=256 Identities=20% Similarity=0.198 Sum_probs=207.7
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... .......+.+|+.++..++||||+++++++.+++..++|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 468999999999999999999764 47899999985421 223344588999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++.. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+|+.....
T Consensus 153 ~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp ECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 999999999999974 2467999999999999999999999998 999999999999999999999999999766533
Q ss_pred CCcccccccccccccccccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 848 GASECMSSVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
. .......+||+.|+|||++. ...++.++||||+||++|||++|+.||......+....++..... ...+
T Consensus 229 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p--- 303 (437)
T 4aw2_A 229 G-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER-FQFP--- 303 (437)
T ss_dssp S-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCCC---
T ss_pred C-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc-ccCC---
Confidence 2 22334568999999999987 567899999999999999999999999865433333333222111 1111
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSA--RPTMREVVH 967 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~ell~ 967 (982)
......+..+.+++.+|+..+|++ ||+++|+++
T Consensus 304 ------------~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 304 ------------TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ------------SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ------------cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 111123447889999999999998 999999987
No 101
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.8e-39 Score=352.13 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=199.1
Q ss_pred HhhcccccccccccceEEEEEEeCC----CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPD----GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|.... +..||+|+..........+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3679999999999999999997532 45799998865444444567899999999999999999999874 567899
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999743 357899999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
.. ........+++.|+|||++.+..++.++||||+|+++|||++ |..||........ ...+.....
T Consensus 169 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-~~~i~~~~~----------- 235 (281)
T 1mp8_A 169 ST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGER----------- 235 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHHHTTCC-----------
T ss_pred cc-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-HHHHHcCCC-----------
Confidence 32 122234456789999999998899999999999999999997 9999986544332 222221111
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 236 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 236 --------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1123344567899999999999999999999999987653
No 102
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=359.66 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=195.8
Q ss_pred hhcccccccccccceEEEEEEeCC-C---cEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc--
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPD-G---IDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN-- 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 764 (982)
++|+..+.||+|+||.||+|.... + ..||||++.... .....+.+.+|+.++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 578999999999999999997643 2 379999985443 333456789999999999999999999999877665
Q ss_pred ----EEEEeccCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 765 ----LLLYEYMPNGSLGEMLHGAK----GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 765 ----~lv~e~~~~~sL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
++||||+++++|.+++.... ...+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEEC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEe
Confidence 99999999999999986422 236899999999999999999999998 9999999999999999999999
Q ss_pred ccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccC
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |..||............ .....
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~- 257 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL-IGGNR- 257 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTCC-
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH-hcCCC-
Confidence 9999987654433333444567889999999999999999999999999999999 99999875443332222 21111
Q ss_pred CCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 916 VSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 258 ------------------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp ------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1122334457899999999999999999999999987654
No 103
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-38 Score=347.18 Aligned_cols=268 Identities=22% Similarity=0.294 Sum_probs=207.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|+..+.||+|+||+||+|.. .+++.||+|++...... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999999976 46899999999654433 334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++ ++.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-- 154 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC--
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc--
Confidence 9975 56665543 3467999999999999999999999998 999999999999999999999999999866432
Q ss_pred cccccccccccccccccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........||+.|+|||++.+.. ++.++||||+||++|||++|..||....+.......+......+...... .....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~ 233 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP-SMTKL 233 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT-TGGGS
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhh-hhccc
Confidence 22334567899999999988766 89999999999999999998888654444333333333322221111100 00000
Q ss_pred e----------cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 929 V----------DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 929 ~----------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. ...........+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00111223345667899999999999999999999986
No 104
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-39 Score=356.97 Aligned_cols=247 Identities=22% Similarity=0.307 Sum_probs=205.2
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.+++.++||||+++++++.++...++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999975 678999999985431 223345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+ +|+|.+++.. ...+++.++..++.||+.|++|||+.+ |+||||||+||++++++.+||+|||++....+.
T Consensus 88 ~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 7899998863 357999999999999999999999998 999999999999999999999999999876533
Q ss_pred CCcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
.......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||........ .
T Consensus 162 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------------~ 217 (336)
T 3h4j_B 162 ---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------------F 217 (336)
T ss_dssp ---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------------B
T ss_pred ---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------------H
Confidence 22345679999999999988776 7899999999999999999999975322110 0
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+.......+...+..+.+++.+||+.||.+|||++|+++
T Consensus 218 ~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 218 KKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 01111111234445567899999999999999999999986
No 105
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.4e-40 Score=357.91 Aligned_cols=275 Identities=25% Similarity=0.337 Sum_probs=206.8
Q ss_pred hhcccccccccccceEEEEEEe-----CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC--Ccc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-----PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR--DTN 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 764 (982)
++|+..+.||+|+||+||+|++ .+++.||||++.. ......+.+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 6789999999999999999973 3688999999843 2333446788999999999999999999998653 458
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
++||||+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 9999999999999999743 346899999999999999999999988 999999999999999999999999999876
Q ss_pred cccCC-cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 845 QDAGA-SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 845 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
..... ........++..|+|||++.+..++.++||||+|+++|||++|..|+.... .......... ........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~--~~~~~~~~~~---~~~~~~~~ 239 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--AEFMRMIGND---KQGQMIVF 239 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH--HHHHHHHCTT---CCTHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh--HHHHhhhcCc---cccchhHH
Confidence 54322 122234457788999999999999999999999999999999999986421 1111111000 00000000
Q ss_pred ccceee-cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 924 SVLAVV-DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 924 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
.....+ .......+..++..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 240 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000001 11112334456678999999999999999999999999998776543
No 106
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.7e-39 Score=346.93 Aligned_cols=254 Identities=29% Similarity=0.407 Sum_probs=198.4
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC---CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT---GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|.. .++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 5788899999999999999987 588999999854432 233467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC--------CCCEEEecccc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS--------DFEAHVADFGL 840 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~--------~~~~kl~DfG~ 840 (982)
||+++++|.+++. ...+++..+..++.|++.|++|||+.+..+|+||||||+||+++. ++.+||+|||.
T Consensus 86 e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 9999999999985 457999999999999999999999987455889999999999986 67899999999
Q ss_pred chhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 841 AKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 841 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
+....... .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||............. ....
T Consensus 163 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~------ 231 (271)
T 3dtc_A 163 AREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA-MNKL------ 231 (271)
T ss_dssp -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH-TSCC------
T ss_pred cccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh-cCCC------
Confidence 98665322 234578999999999999999999999999999999999999997643322211111 1111
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
....+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 232 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 ------------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0112334456799999999999999999999999999864
No 107
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.1e-39 Score=359.06 Aligned_cols=262 Identities=25% Similarity=0.404 Sum_probs=215.2
Q ss_pred HhhcccccccccccceEEEEEEeC------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
.++|+..+.||+|+||.||+|... +++.||+|.+...........+.+|+.++++++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 467999999999999999999653 36789999986544444456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 765 LLLYEYMPNGSLGEMLHGAK--------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
++||||+++++|.+++.... ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEEC
Confidence 99999999999999996422 246789999999999999999999998 9999999999999999999999
Q ss_pred ccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccC
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
|||++................+++.|+|||++.+..++.++||||+|+++|||++ |..||...... .....+....
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~-- 257 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGG-- 257 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTC--
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCC--
Confidence 9999987654433333344567889999999999899999999999999999999 89999764322 2222221111
Q ss_pred CCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 916 VSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
....+...+..+.+++.+||+.||++|||++|+++.|++...+
T Consensus 258 -----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 258 -----------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -----------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1112234455789999999999999999999999999887654
No 108
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.8e-39 Score=347.54 Aligned_cols=256 Identities=22% Similarity=0.350 Sum_probs=209.0
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcC--CccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR--DTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. +++.||+|++..... ....+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 35788999999999999999988 588999999865432 23345789999999999999999999999887 778999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.......+++..+..++.|++.|++|||+.+ .+|+||||||+||+++.++.++++|||.+....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-- 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-- 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec--
Confidence 99999999999998665557999999999999999999999764 459999999999999999999999998875432
Q ss_pred CCcccccccccccccccccccccCCCCc---chhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDE---KSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
.....||+.|+|||++.+..++. ++||||+|+++|||++|+.||............... ..
T Consensus 165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~---------- 228 (271)
T 3kmu_A 165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE-GL---------- 228 (271)
T ss_dssp -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS-CC----------
T ss_pred -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc-CC----------
Confidence 23456899999999998765544 899999999999999999999765433222222111 11
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
....+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 229 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 229 --------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 112233445578999999999999999999999999987654
No 109
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.6e-39 Score=358.14 Aligned_cols=246 Identities=21% Similarity=0.224 Sum_probs=206.5
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|+. .+|+.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 36799999999999999999976 468999999985432 234456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999973 357999999999999999999999998 999999999999999999999999999866432
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...........+. ....
T Consensus 195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~-~~~~------------- 255 (350)
T 1rdq_E 195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV-SGKV------------- 255 (350)
T ss_dssp -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCC-------------
T ss_pred -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH-cCCC-------------
Confidence 234679999999999999999999999999999999999999997643322222222 1111
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPT-----MREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~ell~ 967 (982)
.++...+..+.+++.+||+.||.+||+ ++|+++
T Consensus 256 -------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 -------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 112233457899999999999999998 888875
No 110
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-39 Score=361.37 Aligned_cols=260 Identities=23% Similarity=0.391 Sum_probs=215.4
Q ss_pred HhhcccccccccccceEEEEEEeCC------CcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPD------GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 763 (982)
.++|+..+.||+|+||.||+|.... ...||+|.+...........+.+|+.+++++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678899999999999999997532 2479999986554444566789999999999 89999999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC
Q 002010 764 NLLLYEYMPNGSLGEMLHGAK------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF 831 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~ 831 (982)
.++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCC
Confidence 999999999999999986421 346899999999999999999999998 99999999999999999
Q ss_pred CEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHH
Q 002010 832 EAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVR 910 (982)
Q Consensus 832 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 910 (982)
.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||++ |..||............+.
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 281 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence 999999999987654433333445567889999999999899999999999999999999 9999987655554444443
Q ss_pred HhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 911 KTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
..... ..+...+..+.+++.+||+.||.+|||++|+++.|+++
T Consensus 282 ~~~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 282 DGYQM-------------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HTCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCC-------------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 32211 11222345789999999999999999999999998754
No 111
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.9e-39 Score=351.88 Aligned_cols=260 Identities=27% Similarity=0.364 Sum_probs=202.4
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhc--CCCCcccceEeEEEcC----Ccc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGR--IRHRNIVRLLGYVSNR----DTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~----~~~ 764 (982)
.++|+..+.||+|+||+||+|.. +++.||||++.. .....+.+|.+++.. ++||||+++++++... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46799999999999999999987 789999999843 234556667666665 7999999999986543 457
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLH--------HDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
++||||+++|+|.++++ ...+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+
T Consensus 82 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred EEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence 89999999999999995 357999999999999999999999 777 9999999999999999999999
Q ss_pred ccccchhccccCCcc--cccccccccccccccccccC------CCCcchhhHHHHHHHHHHHhC----------CCCCCC
Q 002010 837 DFGLAKFLQDAGASE--CMSSVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELIAG----------KKPVGE 898 (982)
Q Consensus 837 DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~ 898 (982)
|||+++......... ......||+.|+|||++.+. .++.++||||+||++|||++| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 999998665432211 12345799999999998876 456799999999999999999 888866
Q ss_pred CCCCchHHHHHHHhccCCCCCCcccccceeecCCCC--CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 899 FGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLS--GYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
................... ..+..+ ..+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVDQ-----------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHHHHHTTSC-----------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhccC-----------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 4332222222222111000 001111 12335667899999999999999999999999999754
No 112
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=347.77 Aligned_cols=249 Identities=23% Similarity=0.324 Sum_probs=196.7
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-------------------------CchhhHHHHHHHHhc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-------------------------GNDHGFLAEIQTLGR 745 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~ 745 (982)
++|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5789999999999999999965 56889999998544211 123568899999999
Q ss_pred CCCCcccceEeEEEc--CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCC
Q 002010 746 IRHRNIVRLLGYVSN--RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSN 823 (982)
Q Consensus 746 l~h~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~ 823 (982)
++||||+++++++.+ ....++||||+++++|.+++. ...+++..+..++.||+.|++|||+.+ |+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHH
Confidence 999999999999986 567899999999999988753 457999999999999999999999998 999999999
Q ss_pred cEEEcCCCCEEEeccccchhccccCCcccccccccccccccccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCCCC
Q 002010 824 NILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLK---VDEKSDVYSFGVVLLELIAGKKPVGEFG 900 (982)
Q Consensus 824 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~ 900 (982)
||+++.++.+||+|||++...... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSS--SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccc--cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 999999999999999999876532 22234567999999999998665 4788999999999999999999997532
Q ss_pred CCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 901 DGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. ......+...... .+ .....+..+.+++.+||+.||++|||++|+++
T Consensus 245 ~-~~~~~~~~~~~~~--~~----------------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 I-MCLHSKIKSQALE--FP----------------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H-HHHHHHHHHCCCC--CC----------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H-HHHHHHHhcccCC--CC----------------CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2 1111222111110 00 01123357899999999999999999999874
No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-38 Score=362.89 Aligned_cols=274 Identities=19% Similarity=0.219 Sum_probs=209.1
Q ss_pred Hhhcccccccccc--cceEEEEEEeC-CCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKG--GAGIVYRGSMP-DGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.++|++.+.||+| +||.||+|+.. +++.||||++...... .....+.+|+.++++++|||||++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3679999999999 99999999764 6999999999654322 234567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998766678999999999999999999999998 99999999999999999999999999875543
Q ss_pred cCC-----ccccccccccccccccccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC
Q 002010 847 AGA-----SECMSSVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP 919 (982)
Q Consensus 847 ~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 919 (982)
.+. ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......................
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 211 111233478999999999987 6799999999999999999999999987655444433332221100000
Q ss_pred Cccc---------------cccee----------ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 920 SDAA---------------SVLAV----------VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 920 ~~~~---------------~~~~~----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.... ..... .+......+...+..+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000 00000 000000123344567999999999999999999999986
No 114
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=356.92 Aligned_cols=258 Identities=25% Similarity=0.414 Sum_probs=204.1
Q ss_pred hhcccccccccccceEEEEEEe-CCCcE----EEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGID----VAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
++|+..+.||+|+||.||+|.. .+++. ||+|.+...........+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 5789999999999999999975 34443 57787765556667788999999999999999999999998754 789
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
|+||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999753 457999999999999999999999998 99999999999999999999999999987754
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
...........+|+.|+|||++.+..++.++||||+||++|||++ |..||...... .....+.....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~----------- 237 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILEKGER----------- 237 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCC-----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHcCCC-----------
Confidence 433333444567889999999999999999999999999999999 99999865433 33333322211
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 238 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 238 --------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11223344578999999999999999999999999976543
No 115
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.2e-39 Score=360.44 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=202.7
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... .......+.+|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357999999999999999999764 58899999986543 223345678899999887 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|..++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+|+....
T Consensus 131 V~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999973 457999999999999999999999998 99999999999999999999999999975332
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc--------hHHHHHHHhccCCCC
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV--------DIVRWVRKTTSEVSQ 918 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~~~~~~ 918 (982)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+....
T Consensus 206 ~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~----- 278 (396)
T 4dc2_A 206 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----- 278 (396)
T ss_dssp T--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-----
T ss_pred C--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-----
Confidence 2 233456789999999999999999999999999999999999999996432211 0111111110
Q ss_pred CCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 002010 919 PSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTM------REVVH 967 (982)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~ell~ 967 (982)
..+|...+..+.+++.+||+.||.+||++ +|+++
T Consensus 279 ---------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 279 ---------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp ---------------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred ---------------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 11233344578899999999999999995 56655
No 116
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=359.66 Aligned_cols=255 Identities=19% Similarity=0.251 Sum_probs=207.8
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
..+.+.|+..+.||+|+||.||+|.. .+++.||+|++... .......+.+|+.++++++||||+++++++.+....++
T Consensus 47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc-chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 34567899999999999999999965 46889999988433 22234578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC--CCCEEEeccccchhc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS--DFEAHVADFGLAKFL 844 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~ 844 (982)
||||+++++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++...
T Consensus 126 v~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 126 ILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999999963 3357999999999999999999999998 999999999999974 478999999999876
Q ss_pred cccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 845 QDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 845 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... .......||+.|+|||++.+..++.++||||+||++|||++|..||....... ....+........
T Consensus 202 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~~~------- 270 (387)
T 1kob_A 202 NPD---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFD------- 270 (387)
T ss_dssp CTT---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCC-------
T ss_pred CCC---cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC-------
Confidence 532 22334578999999999999999999999999999999999999997643322 2222222111000
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 271 ---------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 271 ---------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0111233457889999999999999999999987
No 117
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.6e-39 Score=354.27 Aligned_cols=249 Identities=23% Similarity=0.284 Sum_probs=196.7
Q ss_pred HhhcccccccccccceEEEEEEe----CCCcEEEEEEeccCCC---CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM----PDGIDVAIKRLVGRGT---GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 763 (982)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... ......+.+|+.++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999976 4789999999865422 2334567889999999999999999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.++||||+++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999973 457899999999999999999999998 99999999999999999999999999976
Q ss_pred ccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
.... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||............... ..
T Consensus 171 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-~~--------- 238 (327)
T 3a62_A 171 SIHD--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-KL--------- 238 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-CC---------
T ss_pred cccC--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-CC---------
Confidence 4322 12234567999999999999999999999999999999999999999764332222222211 11
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-----TMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|| +++|+++
T Consensus 239 -----------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 -----------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -----------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -----------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11223345788999999999999999 7888876
No 118
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.1e-39 Score=345.82 Aligned_cols=256 Identities=25% Similarity=0.438 Sum_probs=211.9
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|...+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 5788899999999999999988888999999985432 34567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+...... ...
T Consensus 86 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~ 160 (267)
T 3t9t_A 86 EHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYT 160 (267)
T ss_dssp TTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHH
T ss_pred CCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccc-ccc
Confidence 999999999743 356899999999999999999999998 999999999999999999999999999876432 112
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+.....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~i~~~~~---------------- 223 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFR---------------- 223 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTTCC----------------
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-HHHHHHhcCCc----------------
Confidence 2234567789999999998899999999999999999999 89999764322 22222211111
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 224 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 224 ---LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01122234578999999999999999999999999987643
No 119
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4e-38 Score=342.66 Aligned_cols=254 Identities=32% Similarity=0.544 Sum_probs=205.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCch------hhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGND------HGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
++|+..+.||+|+||.||+|.. .+++.||+|++......... +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788899999999999999975 57899999998554433222 57889999999999999999999986544
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC-----EEEeccc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE-----AHVADFG 839 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~-----~kl~DfG 839 (982)
++||||+++++|.+++.. +...+++..+..++.|++.|++|||+.+ ++|+||||||+||+++.++. +||+|||
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 799999999999998864 3467999999999999999999999764 44999999999999988776 9999999
Q ss_pred cchhccccCCcccccccccccccccccccc--cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCch-HHHHHHHhccCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAY--TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVD-IVRWVRKTTSEV 916 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~ 916 (982)
+++.... ......||+.|+|||++. ...++.++||||+|+++|||++|+.||........ ...........
T Consensus 175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~- 248 (287)
T 4f0f_A 175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR- 248 (287)
T ss_dssp TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC-
T ss_pred ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC-
Confidence 9974432 234567899999999984 55678999999999999999999999987544322 12222221111
Q ss_pred CCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 917 SQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 249 -----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 249 -----------------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----------------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 122334456799999999999999999999999999864
No 120
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=355.68 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=192.2
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.+.|+..+.||+|+||.||+|... +++.||||++.... ..+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 3467899999999999999999764 58899999985432 3456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---CCCEEEeccccchhcc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---DFEAHVADFGLAKFLQ 845 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfG~a~~~~ 845 (982)
||+++++|.+++. +...+++.++..++.||+.|++|||+.+ |+||||||+||+++. ++.+||+|||+++...
T Consensus 128 e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 128 ELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCCCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 9999999999997 4457999999999999999999999998 999999999999975 8899999999998765
Q ss_pred ccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||............+........
T Consensus 203 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~-------- 271 (349)
T 2w4o_A 203 HQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI-------- 271 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC--------
T ss_pred cc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccC--------
Confidence 32 2234567899999999999999999999999999999999999999765443323222222111000
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 272 --------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 --------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --------CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111233457889999999999999999999987
No 121
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.2e-39 Score=353.23 Aligned_cols=271 Identities=23% Similarity=0.351 Sum_probs=209.1
Q ss_pred hhcccccccccccceEEEEEEe-----CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC--Ccc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-----PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR--DTN 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 764 (982)
+.|+..+.||+|+||.||+|.+ .+++.||+|++...........+.+|+.++++++||||+++++++..+ ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999999973 468899999997665556667899999999999999999999999876 567
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
++||||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence 999999999999999964 2356999999999999999999999998 999999999999999999999999999876
Q ss_pred cccCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 845 QDAGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 845 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
...... .......+|..|+|||++.+..++.++||||+|+++|||++|..|+... .......... ........
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~-~~~~~~~~ 250 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSP-----MALFLKMIGP-THGQMTVT 250 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH-----HHHHHHHHCS-CCGGGHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcch-----hhHHhhccCC-cccccCHH
Confidence 543221 2234566888999999999999999999999999999999999986431 0011110000 00000000
Q ss_pred ccceee-cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 924 SVLAVV-DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 924 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
.....+ .......+...+..+.+++.+||+.||.+|||++|+++.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 251 RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 000111 1111233445567899999999999999999999999999765
No 122
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.7e-39 Score=355.36 Aligned_cols=262 Identities=27% Similarity=0.395 Sum_probs=215.7
Q ss_pred HhhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCC-
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRD- 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~- 762 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++...........+.+|+.++.++ +||||+++++++..++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 36799999999999999999963 356889999986554444556789999999999 7899999999987754
Q ss_pred ccEEEEeccCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKG--------------GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD 828 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~ 828 (982)
..++||||+++++|.+++..... ..+++..+..++.|++.|++|||+.+ |+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEEC
Confidence 48999999999999999975432 12889999999999999999999998 99999999999999
Q ss_pred CCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHH
Q 002010 829 SDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVR 907 (982)
Q Consensus 829 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 907 (982)
.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |..||...........
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 262 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence 999999999999987654433333445668889999999999999999999999999999998 9999987655544444
Q ss_pred HHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 908 WVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
.+...... ..+...+..+.+++.+||+.||.+|||++|+++.|+.+.+
T Consensus 263 ~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 263 RLKEGTRM-------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHTCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCccC-------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 44332210 1122234578999999999999999999999999987654
No 123
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=349.21 Aligned_cols=254 Identities=30% Similarity=0.488 Sum_probs=199.4
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|.. .++.||+|++.. ....+.+.+|+.++++++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSS---TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecC---hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 5788899999999999999987 578999998842 344567899999999999999999999876 4589999999
Q ss_pred CCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC-EEEeccccchhccccCC
Q 002010 772 PNGSLGEMLHGAKG-GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE-AHVADFGLAKFLQDAGA 849 (982)
Q Consensus 772 ~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~-~kl~DfG~a~~~~~~~~ 849 (982)
++++|.+++..... ..+++..+..++.|+++|++|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999975432 35789999999999999999999932233999999999999998886 799999999765422
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||...........+.......
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 222 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR-------------- 222 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC--------------
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC--------------
Confidence 234568999999999999999999999999999999999999998654432222221111111
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 223 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 223 ----PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp ----CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred ----CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11122334578899999999999999999999999876544
No 124
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=356.26 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=196.9
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCC--CcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRH--RNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~ 768 (982)
++|++.+.||+|+||.||+|...+++.||||++...... .....+.+|+.++.+++| |||+++++++.++...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 468899999999999999998888999999998544322 234578899999999976 99999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
|+ .+++|.+++.. ...+++.++..++.||+.|++|||+.+ |+||||||+||+++ ++.+||+|||+++.+....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 58899999974 467999999999999999999999998 99999999999997 6789999999998776443
Q ss_pred Cccccccccccccccccccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 849 ASECMSSVAGSYGYIAPEYAYT-----------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+.............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--- 238 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH--- 238 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS---
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc---
Confidence 3333446689999999999864 67899999999999999999999999764332211111111000
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
....+...+..+.+++.+||+.||.+|||++|+++
T Consensus 239 ---------------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 239 ---------------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ---------------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---------------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 00122233457889999999999999999999986
No 125
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.8e-39 Score=359.26 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=204.9
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... .......+..|..++..+ +||||+++++++.+.+..|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 46799999999999999999976 468999999985432 234456678899999877 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999973 357999999999999999999999998 99999999999999999999999999975432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 171 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~------------ 235 (345)
T 1xjd_A 171 G--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFHSIRMDNP------------ 235 (345)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC------------
T ss_pred C--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHhCCC------------
Confidence 2 12245578999999999999999999999999999999999999999764332 22222221111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMR-EVV 966 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~-ell 966 (982)
.++...+..+.+++.+||+.||++||++. |++
T Consensus 236 --------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 --------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11222345788999999999999999997 664
No 126
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.7e-39 Score=356.22 Aligned_cols=253 Identities=20% Similarity=0.311 Sum_probs=201.5
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC------
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD------ 762 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 762 (982)
+.++|+..+.||+|+||.||+|... +++.||||++.........+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 5678999999999999999999764 799999999976555556678999999999999999999999886543
Q ss_pred ---------------------------------------------------ccEEEEeccCCCCHHHHhhcCCC-CCCCH
Q 002010 763 ---------------------------------------------------TNLLLYEYMPNGSLGEMLHGAKG-GHLKW 790 (982)
Q Consensus 763 ---------------------------------------------------~~~lv~e~~~~~sL~~~l~~~~~-~~l~~ 790 (982)
..++||||+++++|.+++..... ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 27899999999999999975432 34567
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC----------ccccccccccc
Q 002010 791 ETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA----------SECMSSVAGSY 860 (982)
Q Consensus 791 ~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----------~~~~~~~~gt~ 860 (982)
..++.++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++....... ........||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 778999999999999999998 99999999999999999999999999987654321 12234467999
Q ss_pred ccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHh
Q 002010 861 GYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTG 940 (982)
Q Consensus 861 ~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (982)
.|+|||++.+..++.++||||+|+++|||++|..|+.. .......... ...+......
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~------~~~~~~~~~~----------------~~~~~~~~~~ 298 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME------RVRIITDVRN----------------LKFPLLFTQK 298 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH------HHHHHHHHHT----------------TCCCHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH------HHHHHHHhhc----------------cCCCcccccC
Confidence 99999999999999999999999999999998776432 1111111111 0011111233
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 941 VIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 941 ~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+.+++.+||+.||++|||++|+++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 346789999999999999999999986
No 127
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.7e-38 Score=355.48 Aligned_cols=254 Identities=22% Similarity=0.240 Sum_probs=204.8
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccC----CCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGR----GTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
.+.|+..+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+.++++++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999965 56899999998432 12234667899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC---EEEecccc
Q 002010 766 LLYEYMPNGSLGEMLHGA--KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE---AHVADFGL 840 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~DfG~ 840 (982)
+||||+++++|.+++... ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999887542 2346899999999999999999999998 999999999999987654 99999999
Q ss_pred chhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 841 AKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 841 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
+...... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......+........ +
T Consensus 180 a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~~-~- 253 (351)
T 3c0i_A 180 AIQLGES--GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMN-P- 253 (351)
T ss_dssp CEECCTT--SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCCC-H-
T ss_pred eeEecCC--CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCCC-c-
Confidence 9876542 222345679999999999999999999999999999999999999997631 222222211111000 0
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+++.+||+.||++|||++|+++
T Consensus 254 --------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 --------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000122357889999999999999999999986
No 128
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-38 Score=344.14 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=203.2
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
++.++|+..+.||+|+||.||+|.. .++..||+|++...........+.+|+.++++++||||+++++++.+....++|
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 4567899999999999999999965 568999999997766666678899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccch
Q 002010 768 YEYMPNGSLGEMLHGA--KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAK 842 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~ 842 (982)
|||+++++|.+++... ....+++..+..++.|++.|++|||+.+ |+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 9999999999988532 2467999999999999999999999998 9999999999999 456889999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
.+... .......|++.|+|||++. ..++.++||||+|+++|||++|+.||....... ..........
T Consensus 176 ~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~-------- 242 (285)
T 3is5_A 176 LFKSD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE-VQQKATYKEP-------- 242 (285)
T ss_dssp C-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC--------
T ss_pred ecCCc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH-HHhhhccCCc--------
Confidence 66532 2234567899999999875 568999999999999999999999997643221 1111111111
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.........+..+.+++.+||+.||++|||++|+++
T Consensus 243 ---------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 243 ---------NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---------CCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---------ccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000001112346889999999999999999999985
No 129
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.1e-39 Score=346.26 Aligned_cols=257 Identities=27% Similarity=0.436 Sum_probs=210.9
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
.++|+..+.||+|+||.||+|...++..||+|.+... ......+.+|+.++++++||||+++++++. ++..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC--cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 3678999999999999999999888889999998543 334677899999999999999999999876 4568999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
+++++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||.+....... .
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-Y 164 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-E
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcc-c
Confidence 99999999997433347999999999999999999999998 9999999999999999999999999998765332 2
Q ss_pred ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceee
Q 002010 851 ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVV 929 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (982)
.......+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+.....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~--------------- 228 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQNLERGYR--------------- 228 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCC---------------
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-HHHHHhcccC---------------
Confidence 22234556789999999998889999999999999999999 999997643322 2222211110
Q ss_pred cCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 930 DPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 930 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++++++.|+++..
T Consensus 229 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 229 ----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 01122344578999999999999999999999999876543
No 130
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.3e-39 Score=356.24 Aligned_cols=249 Identities=23% Similarity=0.290 Sum_probs=205.3
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999764 47899999985432 234456788999999988 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999973 357999999999999999999999998 99999999999999999999999999985432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.....
T Consensus 174 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~------------ 238 (353)
T 2i0e_A 174 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEHNV------------ 238 (353)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC------------
T ss_pred C--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHhCCC------------
Confidence 2 223445789999999999999999999999999999999999999997643322 2222221111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPT-----MREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~ell~ 967 (982)
.+|...+..+.+++.+||+.||.+||+ ++|+++
T Consensus 239 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 122233457899999999999999995 577764
No 131
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.8e-38 Score=356.28 Aligned_cols=252 Identities=23% Similarity=0.264 Sum_probs=197.2
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.++++++||||+++++++.+....++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 367999999999999999999764 78999999985432 334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC--EEEeccccchhcccc
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE--AHVADFGLAKFLQDA 847 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~ 847 (982)
|+++|+|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 9999999999963 457999999999999999999999998 999999999999987765 999999999754322
Q ss_pred CCcccccccccccccccccccccCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEK-SDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
.......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||............+...........
T Consensus 172 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~------ 242 (361)
T 3uc3_A 172 ---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP------ 242 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC------
T ss_pred ---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC------
Confidence 22345679999999999988887655 89999999999999999999876655555554444332111000
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 243 ---------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 243 ---------DDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp ---------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ---------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 00112346889999999999999999999987
No 132
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-38 Score=346.82 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=215.5
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|... ++..||+|.+.. .....+.+.+|+.++++++||||+++++++.++...++|||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS--CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 467899999999999999999764 488999999843 33445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+...... .
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~ 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-T 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS-S
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCC-c
Confidence 999999999998766678999999999999999999999998 999999999999999999999999999876533 2
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........+++.|+|||++.+..++.++||||+|+++|+|++ |..||...... .....+.....
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-~~~~~~~~~~~-------------- 230 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYR-------------- 230 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCC--------------
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhccCC--------------
Confidence 233344567889999999998999999999999999999999 99999765432 22332222111
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||.+|||++|+++.|+.+.
T Consensus 231 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 231 -----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 1122334467899999999999999999999999987643
No 133
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=362.02 Aligned_cols=258 Identities=28% Similarity=0.404 Sum_probs=197.7
Q ss_pred hcccccccccccceEEEEEEeC--C--CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEc-CCccEEE
Q 002010 693 SLKDENIIGKGGAGIVYRGSMP--D--GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN-RDTNLLL 767 (982)
Q Consensus 693 ~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 767 (982)
.|+..+.||+|+||.||+|... + +..||+|.+...........+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677789999999999999652 2 246899988654444556789999999999999999999998754 5678999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++.. ....+++..+..++.||++|++|||+.+ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999974 3456899999999999999999999998 999999999999999999999999999876533
Q ss_pred CCc--ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 848 GAS--ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 848 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... .......+++.|+|||++.+..++.++||||+|+++|||++ |.+||........ ...+.....
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~-~~~~~~~~~---------- 314 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGRR---------- 314 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH-HHHHHTTCC----------
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH-HHHHHcCCC----------
Confidence 211 11234557789999999999999999999999999999999 7778876544332 222222111
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 315 ---------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 315 ---------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01122344578999999999999999999999999876543
No 134
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=346.20 Aligned_cols=257 Identities=25% Similarity=0.376 Sum_probs=209.1
Q ss_pred hhccccc-ccccccceEEEEEEeC---CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 692 ESLKDEN-IIGKGGAGIVYRGSMP---DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 692 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
++|...+ .||+|+||.||+|... ++..||+|++.........+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999643 57889999996654444566789999999999999999999999 45668999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 999999999999963 3467999999999999999999999998 999999999999999999999999999876533
Q ss_pred CCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 848 GAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 848 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+.....
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~i~~~~~----------- 231 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIEQGKR----------- 231 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-HHHHHHHTTCC-----------
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHhcCCc-----------
Confidence 221 12233456889999999998889999999999999999999 99999875433 22222222111
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++||+++|+++.|+.+.
T Consensus 232 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 232 --------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp --------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1223344568999999999999999999999999987653
No 135
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-38 Score=360.02 Aligned_cols=251 Identities=23% Similarity=0.295 Sum_probs=197.9
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCC--CCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIR--HRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.|++.+.||+|+||.||+|...+++.||||++..... ......+.+|+.++++++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 35899999999999999999887899999999855432 233467899999999996 599999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
| +.+++|.+++.. ...+++.++..++.||+.||+|||+.+ |+||||||+||+++ ++.+||+|||+++.+....
T Consensus 136 E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 568899999974 357899999999999999999999988 99999999999995 5899999999998775443
Q ss_pred Cccccccccccccccccccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 849 ASECMSSVAGSYGYIAPEYAYT-----------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+.......+......
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~-- 286 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 286 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSC--
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcccc--
Confidence 3333455689999999999865 368899999999999999999999997643322211111111100
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 287 ----------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 287 ----------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ----------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----------------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 0112222457889999999999999999999986
No 136
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.3e-38 Score=352.75 Aligned_cols=249 Identities=21% Similarity=0.268 Sum_probs=203.1
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC--CchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG--GNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 767 (982)
++|+..+.||+|+||.||+|+. .+++.||+|++...... .....+.+|+.++.++ +||||+++++++.+++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5789999999999999999976 45889999999654322 2344678899999888 899999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999973 357999999999999999999999998 999999999999999999999999999854322
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc--------hHHHHHHHhccCCCCC
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV--------DIVRWVRKTTSEVSQP 919 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 919 (982)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+....
T Consensus 164 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------ 235 (345)
T 3a8x_A 164 --GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------ 235 (345)
T ss_dssp --TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC------
T ss_pred --CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC------
Confidence 223455689999999999999999999999999999999999999997532211 1111111100
Q ss_pred CcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 002010 920 SDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTM------REVVH 967 (982)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~ell~ 967 (982)
..+|...+..+.+++.+||+.||.+||++ +|+++
T Consensus 236 --------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 236 --------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp --------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred --------------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 01233344578999999999999999996 56654
No 137
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-39 Score=356.70 Aligned_cols=259 Identities=29% Similarity=0.495 Sum_probs=203.8
Q ss_pred hhcccccccccccceEEEEEEeCC-----CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPD-----GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
++|+..+.||+|+||.||+|.... +..||+|.+...........+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 567888999999999999996532 345999998655444445678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 124 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 9999999999999974 3467999999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 847 AGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 847 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
.... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+.....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~---------- 268 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFR---------- 268 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTTCC----------
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHCCCc----------
Confidence 3211 11223346788999999999999999999999999999999 99999764332 22222221111
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 269 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 ---------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ---------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 01122344578999999999999999999999999876543
No 138
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2e-38 Score=366.31 Aligned_cols=247 Identities=26% Similarity=0.363 Sum_probs=206.6
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5789999999999999999976 479999999985432 2234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++. +...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~- 169 (476)
T 2y94_A 96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 169 (476)
T ss_dssp ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT-
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc-
Confidence 9999999999997 4567999999999999999999999988 999999999999999999999999999876532
Q ss_pred CcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...........+ .....
T Consensus 170 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i-~~~~~------------- 233 (476)
T 2y94_A 170 --EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI-CDGIF------------- 233 (476)
T ss_dssp --CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHH-HTTCC-------------
T ss_pred --ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHH-hcCCc-------------
Confidence 22345679999999999988776 68999999999999999999999764332222222 11110
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 234 -------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 -------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 112223347889999999999999999999987
No 139
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=362.63 Aligned_cols=276 Identities=21% Similarity=0.256 Sum_probs=216.9
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC--ccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD--TNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 768 (982)
++|+..+.||+|+||.||+|... +++.||||++...........+.+|+.++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 57899999999999999999764 589999999965544555677889999999999999999999998765 669999
Q ss_pred eccCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE----cCCCCEEEeccccchh
Q 002010 769 EYMPNGSLGEMLHGAKG-GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL----DSDFEAHVADFGLAKF 843 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~ 843 (982)
||+++++|.+++..... ..+++..++.++.||+.|++|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999975332 34999999999999999999999998 9999999999999 7778899999999987
Q ss_pred ccccCCccccccccccccccccccccc--------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccC
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYT--------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...................
T Consensus 166 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 6532 22345679999999998865 567889999999999999999999997654433333333222221
Q ss_pred CCCCCcccccc------eeecCCC---CCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 916 VSQPSDAASVL------AVVDPRL---SGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 916 ~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
.+... ..... -.+.+.. ...+...+..+.+++.+||+.||++|||++|+++.++.+..
T Consensus 243 ~p~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 243 KPSGA-ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CCTTC-CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CCccc-chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 11100 00000 0111122 14557778889999999999999999999999998876554
No 140
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=346.39 Aligned_cols=259 Identities=28% Similarity=0.401 Sum_probs=208.8
Q ss_pred hcccccccccccceEEEEEEeC-C---CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc-EEE
Q 002010 693 SLKDENIIGKGGAGIVYRGSMP-D---GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN-LLL 767 (982)
Q Consensus 693 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv 767 (982)
.|+..+.||+|+||.||+|... + +..||+|.+.........+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4667789999999999999642 2 2379999986544444556789999999999999999999999876665 999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+.+++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++...+.
T Consensus 102 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 999999999999974 3467899999999999999999999998 999999999999999999999999999866433
Q ss_pred C--CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 848 G--ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 848 ~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
. .........+++.|+|||.+.+..++.++||||+|+++|+|++|..|+....+.......+......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---------- 247 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL---------- 247 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCC----------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCC----------
Confidence 2 1122334567889999999999999999999999999999999666654444444444444332211
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..+...+..+.+++.+||+.||.+|||++|+++.|+++..
T Consensus 248 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 248 ---------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1122334578999999999999999999999999876543
No 141
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=348.64 Aligned_cols=271 Identities=23% Similarity=0.263 Sum_probs=208.4
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC----CCchhhHHHHHHHHhcCC---CCcccceEeEEEcC
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT----GGNDHGFLAEIQTLGRIR---HRNIVRLLGYVSNR 761 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 761 (982)
..++|+..+.||+|+||+||+|.. .+++.||+|++..... ......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999975 5689999999854322 222346778888877775 99999999998775
Q ss_pred C-----ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 762 D-----TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 762 ~-----~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
. ..++||||++ ++|.+++.......+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999996 69999998766666999999999999999999999998 9999999999999999999999
Q ss_pred ccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCC
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEV 916 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 916 (982)
|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|++||....................
T Consensus 163 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999876532 223456789999999999999999999999999999999999999987655444444444333221
Q ss_pred CCCCcccc--cceeecCCCC----CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 917 SQPSDAAS--VLAVVDPRLS----GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 917 ~~~~~~~~--~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
........ ....+.+..+ ......+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11110000 0000100000 112234567899999999999999999999986
No 142
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-38 Score=348.28 Aligned_cols=260 Identities=28% Similarity=0.412 Sum_probs=206.3
Q ss_pred hhcccccccccccceEEEEEEeCC----CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEE-cCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPD----GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVS-NRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 766 (982)
..|+..+.||+|+||.||+|...+ ...||+|.+.........+.+.+|+.++++++||||+++++++. .+...++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468888999999999999997532 33589998865444445567899999999999999999999864 4567899
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 9999999999999974 3467899999999999999999999998 99999999999999999999999999987653
Q ss_pred cCC--cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 847 AGA--SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 847 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
... ........+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||....... ....+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~~~~~--------- 250 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRR--------- 250 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHHTTCC---------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHhcCCC---------
Confidence 321 122334567889999999999999999999999999999999 566665543333 2222222111
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 251 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 251 ----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 011222345789999999999999999999999999876543
No 143
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.3e-38 Score=361.25 Aligned_cols=253 Identities=22% Similarity=0.243 Sum_probs=206.3
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 467999999999999999999764 58899999985421 223345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++.. ..+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+|+.....
T Consensus 148 ~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp ECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 999999999999964 36899999999999999999999998 999999999999999999999999999876533
Q ss_pred CCcccccccccccccccccccccCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLK----VDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
. .......+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...........+...... ...+.
T Consensus 222 ~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~p~--- 296 (410)
T 3v8s_A 222 G-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS-LTFPD--- 296 (410)
T ss_dssp S-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCCCT---
T ss_pred C-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc-ccCCC---
Confidence 2 22334678999999999998665 889999999999999999999999865433333333222111 11110
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSA--RPTMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~ell~ 967 (982)
....+..+.+++.+||+.+|.+ ||+++||++
T Consensus 297 -------------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 297 -------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp -------------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred -------------cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0122347889999999999998 999999987
No 144
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.1e-39 Score=378.23 Aligned_cols=258 Identities=30% Similarity=0.455 Sum_probs=213.5
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
++|+..+.||+|+||.||+|.+.++..||||++.... ...+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 5688889999999999999998888889999985432 345679999999999999999999999876 6789999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++|+|.+++.......+++.++..++.||+.||+|||+++ |+||||||+||++++++.+||+|||+++...... ..
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HH
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-ee
Confidence 9999999997544456899999999999999999999998 9999999999999999999999999998765321 11
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-~~~~~i~~~~~---------------- 482 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYR---------------- 482 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-HHHHHHHTTCC----------------
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC----------------
Confidence 2233456789999999998899999999999999999999 99999764332 22222221111
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
...+..++..+.++|.+||+.||++|||+++|++.|+.+....
T Consensus 483 ---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 483 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 0123344567899999999999999999999999999886644
No 145
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.9e-38 Score=342.14 Aligned_cols=281 Identities=19% Similarity=0.291 Sum_probs=217.8
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999764 689999999854432 2344678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|++ ++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-- 156 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC--
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCC--
Confidence 997 69999998766678999999999999999999999998 999999999999999999999999999876532
Q ss_pred cccccccccccccccccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
........+++.|+|||++.+.. ++.++||||+|+++|||++|+.||................................
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 22234457899999999988765 79999999999999999999999987554444444444333221111100000001
Q ss_pred ecCCCCC--------CChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCCCCCCC
Q 002010 929 VDPRLSG--------YPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPPQSAPS 978 (982)
Q Consensus 929 ~~~~~~~--------~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~~~~~~ 978 (982)
..+.++. .....+..+.+++.+||+.||++|||++|+++ .+.++..+.|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~~~~~ 296 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCCCC
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCCCCCC
Confidence 1111110 11224467899999999999999999999998 77777777665
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.6e-38 Score=347.94 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=209.0
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC-----chhhHHHHHHHHhcCCCCcccceEeEEEcC
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG-----NDHGFLAEIQTLGRIRHRNIVRLLGYVSNR 761 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 761 (982)
..+.+.|+..+.||+|+||.||+|.. .+|+.||+|.+....... ....+.+|+.++++++||||+++++++.+.
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 34567899999999999999999976 468999999986543322 356789999999999999999999999999
Q ss_pred CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC----CEEEec
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF----EAHVAD 837 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~D 837 (982)
...++||||+++++|.+++. +...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEcc
Confidence 99999999999999999997 3467899999999999999999999998 99999999999999887 799999
Q ss_pred cccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 838 FGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 838 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
||++...... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||........... +..... .
T Consensus 163 fg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-i~~~~~--~ 236 (321)
T 2a2a_A 163 FGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-ITSVSY--D 236 (321)
T ss_dssp CTTCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-HHTTCC--C
T ss_pred CccceecCcc---ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHhccc--c
Confidence 9999876532 223456789999999999999999999999999999999999999976433222211 111110 0
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.+ ...+...+..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~--------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 237 FD--------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CC--------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred cC--------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0001123356889999999999999999999987
No 147
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8e-39 Score=352.89 Aligned_cols=265 Identities=24% Similarity=0.355 Sum_probs=200.9
Q ss_pred HhhcccccccccccceEEEEEEeC----CCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc--
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP----DGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT-- 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 763 (982)
.++|+..+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 367899999999999999999653 345899999854432 2234568899999999999999999999887553
Q ss_pred ---cEEEEeccCCCCHHHHhhc----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 764 ---NLLLYEYMPNGSLGEMLHG----AKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 764 ---~~lv~e~~~~~sL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
.++||||+++++|.+++.. .....+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEe
Confidence 4999999999999999853 23467999999999999999999999988 9999999999999999999999
Q ss_pred ccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccC
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
|||++................+++.|+|||.+.+..++.++||||+|+++|||++ |..||........ ...+.....
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~~~~~~~- 267 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-YDYLLHGHR- 267 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-HHHHHTTCC-
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHHcCCC-
Confidence 9999987654433333344567889999999999999999999999999999999 8899976543332 222221111
Q ss_pred CCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCC
Q 002010 916 VSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPS 978 (982)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~ 978 (982)
...+...+..+.+++.+||+.||.+|||++|+++.|+++.+..|+
T Consensus 268 ------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 268 ------------------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp ------------------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ------------------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 112233445789999999999999999999999999887665553
No 148
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.1e-38 Score=352.14 Aligned_cols=258 Identities=17% Similarity=0.197 Sum_probs=208.0
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+|+.+++++ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5788999999999999999975 678999999885432 234688999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC-----EEEeccccchhc
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE-----AHVADFGLAKFL 844 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~-----~kl~DfG~a~~~ 844 (982)
|+ +++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.+
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999753 468999999999999999999999998 999999999999998887 999999999876
Q ss_pred cccCCcc-----cccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhcc-CCCC
Q 002010 845 QDAGASE-----CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTS-EVSQ 918 (982)
Q Consensus 845 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~ 918 (982)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-KERYQKIGDTKRAT 239 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-HHHHHHHHHHHHHS
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-HHHHHHHHhhhccC
Confidence 5432211 22456799999999999999999999999999999999999999987543322 111111110 0000
Q ss_pred CCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 919 PSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
+ ........+ .+.+++.+||+.||.+||++++|++.|+++
T Consensus 240 ~-------------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 240 P-------------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp C-------------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred C-------------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0 000011233 799999999999999999999999988643
No 149
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.5e-39 Score=348.86 Aligned_cols=253 Identities=20% Similarity=0.333 Sum_probs=202.7
Q ss_pred hhcccccccccccceEEEEEEeCC-C-------cEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPD-G-------IDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 763 (982)
++|+..+.||+|+||.||+|.... + ..||+|++... .....+.+.+|+.++++++||||+++++++.+++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 578899999999999999996532 3 47999988432 33455678999999999999999999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC--------EEE
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE--------AHV 835 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~--------~kl 835 (982)
.++||||+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999743 344899999999999999999999998 999999999999998887 999
Q ss_pred eccccchhccccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhcc
Q 002010 836 ADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTS 914 (982)
Q Consensus 836 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 914 (982)
+|||.+...... ....+++.|+|||++.+ ..++.++||||+|+++|||++|..|+....+.............
T Consensus 163 ~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (289)
T 4fvq_A 163 SDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ 236 (289)
T ss_dssp CCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC
T ss_pred ccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCC
Confidence 999999755321 23457889999999987 67999999999999999999965554433332222222221111
Q ss_pred CCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 915 EVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
. +...+..+.+++.+||+.||++|||++|+++.|+++..+.
T Consensus 237 ---~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 237 ---L------------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ---C------------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ---C------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 0 1111225789999999999999999999999999987754
No 150
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.8e-39 Score=358.58 Aligned_cols=246 Identities=23% Similarity=0.257 Sum_probs=194.1
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCC--CCchhhHHHHHHH-HhcCCCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGT--GGNDHGFLAEIQT-LGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+.+ +++.||+|++..... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999764 588999999865432 2334456677776 567899999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999973 457899999999999999999999998 99999999999999999999999999986432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. .......+||+.|+|||++.+..++.++||||+||++|||++|..||...........+.....
T Consensus 192 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~------------- 256 (373)
T 2r5t_A 192 H--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL------------- 256 (373)
T ss_dssp C--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC-------------
T ss_pred C--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-------------
Confidence 2 2234567899999999999999999999999999999999999999976433222222221110
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMRE 964 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e 964 (982)
.++...+..+.+++.+||+.||.+||++.+
T Consensus 257 --------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 257 --------QLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp --------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred --------CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 112223347889999999999999999853
No 151
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-38 Score=342.69 Aligned_cols=247 Identities=21% Similarity=0.317 Sum_probs=183.1
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35799999999999999999965 568999999985543 233456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+ ++++.+++. +...+++.++..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 92 ~e~~-~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 92 IEYA-GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred ehhc-CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 9999 778888886 3457999999999999999999999998 999999999999999999999999999866533
Q ss_pred CCcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||........ ...+.....
T Consensus 166 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~------------ 229 (275)
T 2eue_A 166 ---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNISNGVY------------ 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC------------
T ss_pred ---ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCC------------
Confidence 22344578999999999987765 7899999999999999999999976432221 111111111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 230 --------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 --------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 122233457889999999999999999999976
No 152
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.8e-38 Score=340.19 Aligned_cols=252 Identities=23% Similarity=0.269 Sum_probs=206.2
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
++.++|+..+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4567899999999999999999975 457789999985443 34567889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccchhc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAKFL 844 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 844 (982)
|||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||++ +.++.+||+|||++..+
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 85 MELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999999873 456899999999999999999999998 9999999999999 78899999999999876
Q ss_pred cccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 845 QDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 845 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... .......||+.|+|||++.+. ++.++||||+|+++|||++|+.||...........+. ..... .+.
T Consensus 160 ~~~---~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~--~~~---- 228 (277)
T 3f3z_A 160 KPG---KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIR-EGTFT--FPE---- 228 (277)
T ss_dssp CTT---SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCC--CCH----
T ss_pred cCc---cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hCCCC--CCc----
Confidence 533 233456789999999988764 8999999999999999999999997654332222221 11110 000
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 229 ----------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 ----------KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ----------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ----------hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000123457889999999999999999999985
No 153
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.3e-38 Score=368.66 Aligned_cols=253 Identities=24% Similarity=0.306 Sum_probs=209.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5688999999999999999976 469999999985432 2334566889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||++||+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..+...
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~- 339 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG- 339 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC-
Confidence 9999999999998655566999999999999999999999998 999999999999999999999999999876532
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....................
T Consensus 340 --~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~------------ 405 (576)
T 2acx_A 340 --QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP------------ 405 (576)
T ss_dssp --CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC------------
T ss_pred --ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc------------
Confidence 223446899999999999999999999999999999999999999987543222222221111100
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-----TMREVVH 967 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~ 967 (982)
..++...+..+.+++.+||+.||.+|| +++|+++
T Consensus 406 -----~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 -----EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -----ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 012223345789999999999999999 7888875
No 154
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=348.41 Aligned_cols=270 Identities=22% Similarity=0.296 Sum_probs=201.8
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC-chhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG-NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|.. .+|+.||+|++....... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 46799999999999999999976 458999999885443322 2456789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 155 (311)
T 4agu_A 82 EYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP- 155 (311)
T ss_dssp ECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc-
Confidence 9999999999886 3467999999999999999999999998 999999999999999999999999999876532
Q ss_pred Cccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC------Cc
Q 002010 849 ASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP------SD 921 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~ 921 (982)
........||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||....................+.. ..
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 156 -SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred -ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 222345678999999999876 6689999999999999999999999987544333333222211100000 00
Q ss_pred ccccceeecCCCC-C---CChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 922 AASVLAVVDPRLS-G---YPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 922 ~~~~~~~~~~~~~-~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
........++... . .....+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000000 0 01234456889999999999999999999986
No 155
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.6e-38 Score=352.66 Aligned_cols=260 Identities=24% Similarity=0.380 Sum_probs=207.9
Q ss_pred HhhcccccccccccceEEEEEEe------CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM------PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++...........+.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 36799999999999999999973 357789999986554445566789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---CCCEEEe
Q 002010 765 LLLYEYMPNGSLGEMLHGAKG-----GHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---DFEAHVA 836 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~ 836 (982)
++||||+++++|.+++..... ..+++..++.++.|++.|++|||+.+ |+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999975432 45899999999999999999999998 999999999999984 4569999
Q ss_pred ccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccC
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
|||++................+++.|+|||++.+..++.++||||+|+++|||++ |..||..... ......+.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~- 263 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGR- 263 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCC-
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-HHHHHHHhcCCC-
Confidence 9999987654433333445667899999999998899999999999999999998 9999976432 222222222111
Q ss_pred CCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 916 VSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||.+|||++|+++.|+.+.
T Consensus 264 ------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 264 ------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp ------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1112234457899999999999999999999999886543
No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-38 Score=352.75 Aligned_cols=268 Identities=22% Similarity=0.228 Sum_probs=208.5
Q ss_pred HHHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccC----CCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC
Q 002010 687 AEDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGR----GTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR 761 (982)
Q Consensus 687 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 761 (982)
..++.++|+..+.||+|+||.||+|.. .+++.||+|++... ......+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 456778999999999999999999965 56889999998543 1344567889999999999999999999999999
Q ss_pred CccEEEEeccCCCCHHHHhhcCC--------------------------------------CCCCCHHHHHHHHHHHHHH
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAK--------------------------------------GGHLKWETRYRIALEAAKG 803 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~i~~~ 803 (982)
+..++||||+++|+|.+++.... ...+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985210 1123577888999999999
Q ss_pred HHHHhhcCCCcEEecCCCCCcEEEcCCC--CEEEeccccchhccccCC--ccccccccccccccccccccc--CCCCcch
Q 002010 804 LCYLHHDCSPLIIHRDVKSNNILLDSDF--EAHVADFGLAKFLQDAGA--SECMSSVAGSYGYIAPEYAYT--LKVDEKS 877 (982)
Q Consensus 804 l~~LH~~~~~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 877 (982)
++|||+.+ |+||||||+||+++.++ .+||+|||++..+..... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999998 99999999999998776 899999999986643221 122345679999999999875 6789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCC
Q 002010 878 DVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESS 957 (982)
Q Consensus 878 DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 957 (982)
||||+|+++|||++|+.||.................. ...+ .....+..+.+++.+||+.||.
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~----------------~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC-FENP----------------NYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-TTSG----------------GGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccc-cCCc----------------ccccCCHHHHHHHHHHcCCChh
Confidence 9999999999999999999865444333333222111 0000 0112345788999999999999
Q ss_pred CCCCHHHHHH--HhcCCCC
Q 002010 958 ARPTMREVVH--MLANPPQ 974 (982)
Q Consensus 958 ~Rpt~~ell~--~L~~~~~ 974 (982)
+|||++|+++ .++...+
T Consensus 321 ~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 321 ERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp TSCCHHHHHHSHHHHTTSS
T ss_pred HCCCHHHHhcChhhccChH
Confidence 9999999987 4555443
No 157
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.6e-39 Score=360.23 Aligned_cols=267 Identities=14% Similarity=0.213 Sum_probs=204.3
Q ss_pred HhhcccccccccccceEEEEEEeCC------CcEEEEEEeccCCCC----------CchhhHHHHHHHHhcCCCCcccce
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPD------GIDVAIKRLVGRGTG----------GNDHGFLAEIQTLGRIRHRNIVRL 754 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~ 754 (982)
.++|++.+.||+|+||.||+|.... ++.||||++...... .....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3479999999999999999997644 478999998543210 011124456667778889999999
Q ss_pred EeEEEcC----CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc--
Q 002010 755 LGYVSNR----DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-- 828 (982)
Q Consensus 755 ~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-- 828 (982)
++++... ...++||||+ +++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9998765 4479999999 9999999974 3467999999999999999999999998 99999999999999
Q ss_pred CCCCEEEeccccchhccccCCcc-----cccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc
Q 002010 829 SDFEAHVADFGLAKFLQDAGASE-----CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV 903 (982)
Q Consensus 829 ~~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 903 (982)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 88999999999998765432111 1234559999999999999999999999999999999999999998644443
Q ss_pred hHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 904 DIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
........... ......+++.+. +...+..+.+++..||+.||++||+++++++.|+.+
T Consensus 269 ~~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 269 KYVRDSKIRYR--------ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHHHHH--------HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhh--------hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 33333322211 011111111111 122345789999999999999999999999988654
No 158
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-38 Score=346.40 Aligned_cols=260 Identities=18% Similarity=0.244 Sum_probs=210.1
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+|+.+++++ +|++++++++++.+....++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 5799999999999999999974 679999999885432 334578999999999 79999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC-----EEEeccccchhc
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE-----AHVADFGLAKFL 844 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~-----~kl~DfG~a~~~ 844 (982)
|+ +++|.+++... ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 87 ~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 99999999743 356999999999999999999999988 999999999999987776 999999999876
Q ss_pred cccCCc-----ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHH--HHHHHhccCCC
Q 002010 845 QDAGAS-----ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIV--RWVRKTTSEVS 917 (982)
Q Consensus 845 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~ 917 (982)
...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||.......... ..+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 543221 22345679999999999999999999999999999999999999998754332211 11111111000
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
........+..+.+++.+||+.||++|||+++|++.|+++..
T Consensus 242 ---------------~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 242 ---------------LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp ---------------HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred ---------------HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 001112334578999999999999999999999999876543
No 159
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=351.15 Aligned_cols=267 Identities=23% Similarity=0.286 Sum_probs=208.2
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEE----cCCccEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVS----NRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~l 766 (982)
++|+..+.||+|+||.||+|.. .+++.||+|++... .......+.+|+.++++++||||+++++++. .....++
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 5789999999999999999975 67999999988543 3344567889999999999999999999986 3446789
Q ss_pred EEeccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 767 LYEYMPNGSLGEMLHGA--KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
||||+++++|.+++... ....+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999998742 3467999999999999999999999998 999999999999999999999999998754
Q ss_pred cccCCc-------ccccccccccccccccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCCCC-CCchHHHHHHHhc
Q 002010 845 QDAGAS-------ECMSSVAGSYGYIAPEYAYTLK---VDEKSDVYSFGVVLLELIAGKKPVGEFG-DGVDIVRWVRKTT 913 (982)
Q Consensus 845 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~-~~~~~~~~~~~~~ 913 (982)
...... .......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||.... .............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 321110 0112345799999999987554 7899999999999999999999996411 1111111111100
Q ss_pred cCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCCCCCC
Q 002010 914 SEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLIT 981 (982)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~~~~~ 981 (982)
. . ..+...+..+.+++.+||+.||.+|||++|+++.|+.+..+.|...+
T Consensus 265 ~-~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~~ 313 (317)
T 2buj_A 265 S-I------------------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHT 313 (317)
T ss_dssp --C------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC---
T ss_pred C-C------------------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCCC
Confidence 0 0 01123345789999999999999999999999999999998887654
No 160
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=367.71 Aligned_cols=348 Identities=20% Similarity=0.138 Sum_probs=255.4
Q ss_pred CCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhcc
Q 002010 243 LQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFK 322 (982)
Q Consensus 243 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 322 (982)
-+.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 356888888887 5565553 5788888888888887788888888888888888888887788888888888888888
Q ss_pred CCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCC
Q 002010 323 NNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIP 402 (982)
Q Consensus 323 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~ 402 (982)
|++++..+..|.++++|++|+|++|.+++..+..+..+++|+.|++++|.+++..+..|..+++|++|++++|.+.+..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 88887666778888888888888888888778888888888888888888887777788888888888888888877777
Q ss_pred ccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCc
Q 002010 403 EELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSL 482 (982)
Q Consensus 403 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L 482 (982)
..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|. +.+.+|..+....+|
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~-----------------------~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP-----------------------YLDTMTPNCLYGLNL 226 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT-----------------------TCCEECTTTTTTCCC
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc-----------------------cccccCcccccCccc
Confidence 777888888888888888876666666666655555555544 444444444444566
Q ss_pred ceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccc
Q 002010 483 NILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRN 562 (982)
Q Consensus 483 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 562 (982)
++|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 66666666666433345566666677777777776666666777777777777777777777777777777777777777
Q ss_pred cccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 563 GITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 563 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
+|++..+..|..+++|+.|+|++|++++..+....+.......+.++...|..|
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 777666667777778888888888777654422112223334566777777655
No 161
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.9e-38 Score=342.20 Aligned_cols=247 Identities=28% Similarity=0.418 Sum_probs=201.9
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. .++..||+|++.... .......+.+|+.++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 36789999999999999999965 457899999984432 123356688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999973 357899999999999999999999988 999999999999999999999999998654322
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...+.....
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~------------- 224 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRISRVEF------------- 224 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCC-------------
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHHHHhCCC-------------
Confidence 22446789999999999999999999999999999999999999975432222 221111111
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 225 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 225 -------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 112223457889999999999999999999997
No 162
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-38 Score=352.27 Aligned_cols=260 Identities=26% Similarity=0.421 Sum_probs=206.7
Q ss_pred hhcccccccccccceEEEEEEe-CCCcE--EEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGID--VAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 767 (982)
++|+..+.||+|+||.||+|+. .++.. ||+|.+...........+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 6789999999999999999965 35654 4999986655555667899999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCE
Q 002010 768 YEYMPNGSLGEMLHGAK--------------GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEA 833 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 833 (982)
|||+++++|.+++.... ...+++..++.++.||+.|++|||+.+ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997532 247999999999999999999999998 9999999999999999999
Q ss_pred EEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHh
Q 002010 834 HVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 834 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 912 (982)
||+|||+++..... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ......
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~~~ 254 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEKL 254 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHG
T ss_pred EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH----HHHHHh
Confidence 99999999743321 12233456789999999998889999999999999999998 99999764322 122111
Q ss_pred ccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCCC
Q 002010 913 TSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAP 977 (982)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~~ 977 (982)
... .....+...+..+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 255 ~~~----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 255 PQG----------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp GGT----------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred hcC----------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 110 0011223345678999999999999999999999999876554443
No 163
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.9e-38 Score=344.09 Aligned_cols=258 Identities=27% Similarity=0.408 Sum_probs=206.4
Q ss_pred HhhcccccccccccceEEEEEEeCC----CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPD----GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|...+ +..||+|.+.........+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3678999999999999999996532 346999998655444456778999999999999999999998764 56789
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+.....
T Consensus 90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 9999999999999974 2356899999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
.. ........+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+..... .
T Consensus 166 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~-~~~~~~~~~~-~--------- 233 (281)
T 3cc6_A 166 ED-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-VIGVLEKGDR-L--------- 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG-HHHHHHHTCC-C---------
T ss_pred cc-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH-HHHHHhcCCC-C---------
Confidence 32 122334557889999999998899999999999999999998 999997644332 2232222211 0
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..+...+..+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 234 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 234 ---------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 1122234578999999999999999999999999976543
No 164
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-38 Score=368.03 Aligned_cols=249 Identities=22% Similarity=0.265 Sum_probs=197.2
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccC--CCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGR--GTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35799999999999999999965 56899999998543 2334455678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHH-DCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
|||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+ |+||||||+||+++.++.+||+|||+|+....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999973 4579999999999999999999997 77 99999999999999999999999999986432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 302 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~------------ 366 (446)
T 4ejn_A 302 D--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELILMEEI------------ 366 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC------------
T ss_pred C--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCCC------------
Confidence 2 22345578999999999999999999999999999999999999999764332 22222221111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-----TMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~ 967 (982)
.++...+..+.+++.+||+.||.+|| |++|+++
T Consensus 367 --------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 --------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11223345789999999999999999 9999986
No 165
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=352.41 Aligned_cols=268 Identities=19% Similarity=0.268 Sum_probs=200.5
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
++|+..+.||+|+||.||+|... +++.||+|++...........+.+|+.++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999764 68999999986554444444566899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
++ ++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP--T 154 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC--c
Confidence 96 5899988743 456899999999999999999999998 999999999999999999999999999865432 2
Q ss_pred cccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc---
Q 002010 851 ECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL--- 926 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 926 (982)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........................ .....
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~ 233 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW-PGILSNEE 233 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS-TTGGGCHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhc-hhhhcchh
Confidence 22344578999999999876 56899999999999999999999999875444433333333322211111 00000
Q ss_pred --eeecCCCC-----CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 --AVVDPRLS-----GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 --~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
....+... ......+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000100 111233457889999999999999999999987
No 166
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.4e-38 Score=350.11 Aligned_cols=270 Identities=17% Similarity=0.214 Sum_probs=200.3
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
..++|+..+.||+|+||+||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 457899999999999999999964 5789999999854432 22345677999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc-----CCCCEEEeccccch
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-----SDFEAHVADFGLAK 842 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-----~~~~~kl~DfG~a~ 842 (982)
|||++ ++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++ +++.+||+|||+++
T Consensus 112 ~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99997 599999974 456999999999999999999999998 99999999999994 45569999999998
Q ss_pred hccccCCcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD 921 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (982)
..... ........+|+.|+|||++.+. .++.++||||+||++|||++|+.||.........................
T Consensus 186 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 76532 2223456789999999998874 48999999999999999999999998755444444444433322111110
Q ss_pred ccccceeecCCCCC---------CChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 922 AASVLAVVDPRLSG---------YPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 922 ~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+....+. .+...+..+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000111110 11123467889999999999999999999986
No 167
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-38 Score=351.59 Aligned_cols=257 Identities=26% Similarity=0.349 Sum_probs=196.8
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC--chhhHHHHHHHHhcCCCCcccceEeEEEcCCcc---
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG--NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN--- 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 764 (982)
.++|+..+.||+|+||.||+|+. .+++.||||++....... ....+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999975 678999999986543322 234688999999999999999999998776554
Q ss_pred -EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 765 -LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 765 -~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
++||||+++++|.+++.. ...+++.++..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999999999973 357999999999999999999999998 99999999999999999999999999987
Q ss_pred ccccCC-cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 844 LQDAGA-SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 844 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
+..... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||.................. .+.
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---~~~-- 240 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI---PPS-- 240 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC---CHH--
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC---Ccc--
Confidence 654322 12233457899999999999999999999999999999999999999764332222222211111 000
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHH-HHh
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVV-HML 969 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell-~~L 969 (982)
......+..+.+++.+||+.||++||++.+++ +.+
T Consensus 241 ------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 276 (311)
T 3ork_A 241 ------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276 (311)
T ss_dssp ------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred ------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHH
Confidence 01112345788999999999999999766654 444
No 168
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-38 Score=347.29 Aligned_cols=265 Identities=20% Similarity=0.224 Sum_probs=201.3
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC--chhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG--NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
...++|+..+.||+|+||.||+|.. .+++.||+|++....... ....+.+|+.++++++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 3457899999999999999999976 468899999985443222 2367889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
+||||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 111 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999999973 357999999999999999999999998 9999999999999999999999999998765
Q ss_pred ccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
... ........|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+..... .
T Consensus 186 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~---~------- 253 (309)
T 2h34_A 186 DEK-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-VMGAHINQAIP---R------- 253 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-HHHHHHHSCCC---C-------
T ss_pred ccc-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-HHHHHhccCCC---C-------
Confidence 332 22234567899999999999999999999999999999999999999753221 11111111100 0
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-CHHHHHHHhcCCCCCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-TMREVVHMLANPPQSAP 977 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~ell~~L~~~~~~~~ 977 (982)
....+...+..+.+++.+||+.||++|| +++++++.|+...+...
T Consensus 254 -------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 254 -------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp -------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred -------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 0012223345788999999999999999 99999999988776554
No 169
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=360.42 Aligned_cols=255 Identities=22% Similarity=0.194 Sum_probs=204.9
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|+. .+++.||+|++.+.. .......+.+|+.++..++||||+++++++.+++..|+|
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 46799999999999999999976 469999999985421 122344588999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++... ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++++||+|||+++.....
T Consensus 140 mE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 9999999999999742 347999999999999999999999998 999999999999999999999999999876533
Q ss_pred CCcccccccccccccccccccc-------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 848 GASECMSSVAGSYGYIAPEYAY-------TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
. .......+||+.|+|||++. ...++.++||||+||++|||++|+.||...........++..... ..
T Consensus 216 ~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~~--- 290 (412)
T 2vd5_A 216 G-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH-LS--- 290 (412)
T ss_dssp S-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CC---
T ss_pred C-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-cC---
Confidence 2 22234568999999999987 356899999999999999999999999765433333333221111 00
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSAR---PTMREVVH 967 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---pt~~ell~ 967 (982)
++..+...+..+.+++.+||. +|.+| |+++|+++
T Consensus 291 ------------~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 291 ------------LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ------------CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ------------CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 011112234578999999999 99998 59999886
No 170
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7.7e-39 Score=353.57 Aligned_cols=269 Identities=26% Similarity=0.358 Sum_probs=207.6
Q ss_pred cccccccccccceEEEEEEe-----CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC--CccEE
Q 002010 694 LKDENIIGKGGAGIVYRGSM-----PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR--DTNLL 766 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 766 (982)
|+..+.||+|+||+||++.+ .+++.||||++...........+.+|+.++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999998854 268899999996554444556789999999999999999999999874 56789
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.. ..+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999964 34999999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 847 AGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 847 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
.... .......+++.|+|||++.+..++.++||||+|+++|||++|+.||...... .......... .......
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~--~~~~~~~~~~----~~~~~~~ 260 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK--FLELIGIAQG----QMTVLRL 260 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH--HHHHHCSCCH----HHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh--hhhhhccccc----chhHHHH
Confidence 3221 2233456788999999999989999999999999999999999998652110 0000000000 0000000
Q ss_pred ceeecC-CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 926 LAVVDP-RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 926 ~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...++. .....+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 261 TELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 011111 1113344556789999999999999999999999999977644
No 171
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=354.67 Aligned_cols=248 Identities=21% Similarity=0.255 Sum_probs=197.9
Q ss_pred ccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEeccCC
Q 002010 695 KDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPN 773 (982)
Q Consensus 695 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 773 (982)
...+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR-GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc-ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 3467899999999999965 56899999998543 223456789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE--cCCCCEEEeccccchhccccCCcc
Q 002010 774 GSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL--DSDFEAHVADFGLAKFLQDAGASE 851 (982)
Q Consensus 774 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill--~~~~~~kl~DfG~a~~~~~~~~~~ 851 (982)
++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.+....
T Consensus 171 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--- 243 (373)
T 2x4f_A 171 GELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--- 243 (373)
T ss_dssp CEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---
Confidence 999998864 3356899999999999999999999998 9999999999999 567899999999998765332
Q ss_pred cccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecC
Q 002010 852 CMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDP 931 (982)
Q Consensus 852 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (982)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....+......+....... + .
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~---~----------~- 309 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL---E----------D- 309 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCS---C----------S-
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC---C----------h-
Confidence 2334579999999999998899999999999999999999999997654433333332221110 0 0
Q ss_pred CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 932 RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 932 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..+.+++.+||+.||.+|||++|+++
T Consensus 310 ---~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 310 ---EEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ---GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 001123457899999999999999999999987
No 172
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=7.5e-38 Score=340.00 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=206.2
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.++++++||||+++++++.++...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46899999999999999999965 4689999999855432 233456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC---EEEeccccchhcc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE---AHVADFGLAKFLQ 845 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~DfG~a~~~~ 845 (982)
||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++. +||+|||.+....
T Consensus 85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 99999999998873 357999999999999999999999998 999999999999986655 9999999997665
Q ss_pred ccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
.. .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||....... ....+.......+.+
T Consensus 160 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~------ 229 (284)
T 3kk8_A 160 DS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSP------ 229 (284)
T ss_dssp SS---CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTT------
T ss_pred cC---ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhccccCCch------
Confidence 32 22345678999999999999999999999999999999999999997643322 222222211111100
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 230 ----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 ----------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11123456889999999999999999999987
No 173
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.9e-38 Score=342.82 Aligned_cols=248 Identities=28% Similarity=0.375 Sum_probs=208.9
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
+.|+..+.||+|+||.||+|.. .+++.||+|++...........+.+|+.++++++||||+++++++.++...++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 5688999999999999999965 568999999997665566678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCc
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGAS 850 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 850 (982)
+++++|.+++. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+.......
T Consensus 102 ~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 102 LGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 99999999995 357999999999999999999999998 9999999999999999999999999998765332
Q ss_pred ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeec
Q 002010 851 ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVD 930 (982)
Q Consensus 851 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (982)
.......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~---------------- 236 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-KVLFLIPKNNP---------------- 236 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCC----------------
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-HHHHHhhcCCC----------------
Confidence 2234567899999999999999999999999999999999999999764322 22222111110
Q ss_pred CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 931 PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 931 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 237 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 237 ---PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp ---CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0112233457899999999999999999999986
No 174
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.2e-38 Score=349.37 Aligned_cols=251 Identities=21% Similarity=0.292 Sum_probs=202.4
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
.+.++|+..+.||+|+||.||+|.. .+++.||+|++..... ...+|++++.++ +||||+++++++.+++..++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3567899999999999999999965 4689999999854322 245788888888 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC----CCEEEeccccch
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD----FEAHVADFGLAK 842 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~----~~~kl~DfG~a~ 842 (982)
||||+++|+|.+++. +...+++..+..++.||+.|++|||+.+ |+||||||+||++.++ +.+||+|||++.
T Consensus 94 v~E~~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 999999999999997 4467999999999999999999999998 9999999999998543 359999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC--chHHHHHHHhccCCCCCC
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDG--VDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 920 (982)
...... .......||+.|+|||++.+..++.++||||+||++|||++|..||....+. ..+...+....... +
T Consensus 169 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~--~- 243 (342)
T 2qr7_A 169 QLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL--S- 243 (342)
T ss_dssp ECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC--C-
T ss_pred cCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc--C-
Confidence 765432 2234567899999999998888999999999999999999999999764322 12222222111100 0
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 244 -------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 244 -------------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -------------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112234457889999999999999999999886
No 175
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=348.54 Aligned_cols=244 Identities=23% Similarity=0.341 Sum_probs=204.5
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC-------chhhHHHHHHHHhcCCCCcccceEeEEEc
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG-------NDHGFLAEIQTLGRIRHRNIVRLLGYVSN 760 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 760 (982)
.+.++|+..+.||+|+||.||+|.. .+++.||||++....... ....+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 4668899999999999999999964 568999999986543211 33467789999999999999999999999
Q ss_pred CCccEEEEeccCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccc
Q 002010 761 RDTNLLLYEYMPNG-SLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFG 839 (982)
Q Consensus 761 ~~~~~lv~e~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 839 (982)
.+..++||||+.+| +|.+++. +...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence 99999999999776 9999997 4457999999999999999999999998 9999999999999999999999999
Q ss_pred cchhccccCCcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ 918 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 918 (982)
++...... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... . ....
T Consensus 176 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~---~~~~-- 241 (335)
T 3dls_A 176 SAAYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------V---EAAI-- 241 (335)
T ss_dssp TCEECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------T---TTCC--
T ss_pred cceECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------H---hhcc--
Confidence 99876533 22344678999999999988876 78999999999999999999999652110 0 0000
Q ss_pred CCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 919 PSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 242 ----------------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 242 ----------------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp ----------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----------------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011123457899999999999999999999998
No 176
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=352.85 Aligned_cols=269 Identities=17% Similarity=0.198 Sum_probs=202.6
Q ss_pred hhcccccccccccceEEEEEEeC----CCcEEEEEEeccCCCCC----------chhhHHHHHHHHhcCCCCcccceEeE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP----DGIDVAIKRLVGRGTGG----------NDHGFLAEIQTLGRIRHRNIVRLLGY 757 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~ 757 (982)
++|+..+.||+|+||.||+|... ++..||+|+........ ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57899999999999999999764 57889999885442210 12346678889999999999999999
Q ss_pred EEc----CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC--
Q 002010 758 VSN----RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF-- 831 (982)
Q Consensus 758 ~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~-- 831 (982)
+.. ....++||||+ +++|.+++... ..+++.+++.++.||+.|++|||+.+ |+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCC
Confidence 887 67889999999 99999999743 38999999999999999999999998 99999999999999887
Q ss_pred CEEEeccccchhccccCCc-----ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHH
Q 002010 832 EAHVADFGLAKFLQDAGAS-----ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIV 906 (982)
Q Consensus 832 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 906 (982)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876533211 11244579999999999999999999999999999999999999996533322222
Q ss_pred HHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 907 RWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
.......... .+. ..... . .+...+..+.+++.+||+.||++|||+++|++.|+....+.
T Consensus 271 ~~~~~~~~~~-~~~---~~~~~----~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 271 QTAKTNLLDE-LPQ---SVLKW----A--PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp HHHHHHHHHT-TTH---HHHHH----S--CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred HHHHHhhccc-ccH---HHHhh----c--cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 2222111100 000 00000 0 00133457999999999999999999999999999876543
No 177
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=375.87 Aligned_cols=249 Identities=25% Similarity=0.383 Sum_probs=202.1
Q ss_pred ccccccceEEEEEEeC---CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEeccCCCC
Q 002010 699 IIGKGGAGIVYRGSMP---DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPNGS 775 (982)
Q Consensus 699 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s 775 (982)
.||+|+||.||+|.+. ++..||||+++........+.+.+|+.++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999653 4667999999765555567889999999999999999999999976 56899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC-ccccc
Q 002010 776 LGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA-SECMS 854 (982)
Q Consensus 776 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~ 854 (982)
|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+..... .....
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 9999964 3467999999999999999999999998 99999999999999999999999999987653321 11122
Q ss_pred ccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCC
Q 002010 855 SVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRL 933 (982)
Q Consensus 855 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (982)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +....+.....
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-~~~~~i~~~~~------------------- 557 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIEQGKR------------------- 557 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-HHHHHHHTTCC-------------------
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHcCCC-------------------
Confidence 3345689999999999999999999999999999998 99999875443 23333222111
Q ss_pred CCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 934 SGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 934 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
...+..++..+.++|.+||+.||++|||+++|++.|+.+
T Consensus 558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 122334556899999999999999999999999988653
No 178
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=340.84 Aligned_cols=250 Identities=25% Similarity=0.390 Sum_probs=185.5
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999975 579999999985432 223356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 999999999999974 3367899999999999999999999998 999999999999999999999999999866432
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
. .......|++.|+|||++.+..++.++||||+|+++|||++|+.||.......... ....
T Consensus 166 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~------------- 226 (278)
T 3cok_A 166 H--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN----KVVL------------- 226 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCS-------------
T ss_pred C--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH----HHhh-------------
Confidence 1 12234578999999999999889999999999999999999999997643221110 0000
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.. ...+...+..+.+++.+||+.||++|||++|+++
T Consensus 227 ---~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 227 ---AD-YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---SC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cc-cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00 0122334457889999999999999999999987
No 179
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.6e-38 Score=347.96 Aligned_cols=254 Identities=19% Similarity=0.252 Sum_probs=183.1
Q ss_pred HHhhccc---ccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCcccceEeEEEcCCcc
Q 002010 690 VLESLKD---ENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 690 ~~~~~~~---~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 764 (982)
+.++|+. .+.||+|+||.||+|.. .+++.||||++.. .....+.+|+.+++++. ||||+++++++.++...
T Consensus 6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 3455554 37899999999999976 4689999999843 23566789999999997 99999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC---CEEEeccccc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF---EAHVADFGLA 841 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~DfG~a 841 (982)
++||||+++++|.+++.. ...+++.++..++.|++.|++|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 156 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFA 156 (325)
T ss_dssp EEEECCCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTC
T ss_pred EEEEEccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccc
Confidence 999999999999999974 467999999999999999999999998 99999999999998765 8999999999
Q ss_pred hhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC---chHHHHHHHhccCCCC
Q 002010 842 KFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDG---VDIVRWVRKTTSEVSQ 918 (982)
Q Consensus 842 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~ 918 (982)
+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ................
T Consensus 157 ~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~ 234 (325)
T 3kn6_A 157 RLKPPD--NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS 234 (325)
T ss_dssp EECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC
T ss_pred eecCCC--CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC
Confidence 865432 22234567899999999999999999999999999999999999999764321 1111222211110000
Q ss_pred CCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 919 PSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.. .......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~-------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 235 FE-------------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CC-------------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CC-------------cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00 0001123457899999999999999999999875
No 180
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-37 Score=358.08 Aligned_cols=347 Identities=26% Similarity=0.347 Sum_probs=194.6
Q ss_pred cCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHH
Q 002010 142 GMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREM 221 (982)
Q Consensus 142 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L 221 (982)
.+++|+.|++++|.++ .+| .+..+++|++|+|++|.+++..| ++++++|++|++++|.+.+.
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-------------- 105 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI-------------- 105 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--------------
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccC--------------
Confidence 3566777777777776 344 36677777777777777764433 55555555555555444311
Q ss_pred hhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcc
Q 002010 222 YIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYL 301 (982)
Q Consensus 222 ~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 301 (982)
++ ++++++|++|++++|++++..+ +.++++|++|++++|++++. + .+..+++|++|+++ |.+
T Consensus 106 ------------~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 106 ------------TP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp ------------GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESC
T ss_pred ------------hh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-Ccc
Confidence 11 3444555555555555553322 45555555555555555532 2 24455555555554 222
Q ss_pred cCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccc
Q 002010 302 TGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDL 381 (982)
Q Consensus 302 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 381 (982)
.+.. . +..+++|++|++++|.++.. ..+..+++|+.|++++|.+++..| +
T Consensus 168 ~~~~--~------------------------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 217 (466)
T 1o6v_A 168 TDLK--P------------------------LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--L 217 (466)
T ss_dssp CCCG--G------------------------GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred cCch--h------------------------hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--c
Confidence 2211 1 34444444444444444421 124444444444444444443322 3
Q ss_pred cCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEE
Q 002010 382 CKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQL 461 (982)
Q Consensus 382 ~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L 461 (982)
..+++|++|++++|.+.+. ..+..+++|++|++++|++++..+ +..+ .+|+.|
T Consensus 218 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l-----------------------~~L~~L 270 (466)
T 1o6v_A 218 GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL-----------------------TKLTEL 270 (466)
T ss_dssp GGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC-----------------------TTCSEE
T ss_pred cccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC-----------------------CCCCEE
Confidence 3344444444444444332 234555556666666665553322 3333 345555
Q ss_pred EeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCccc
Q 002010 462 KVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLY 541 (982)
Q Consensus 462 ~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 541 (982)
++++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..| +..+++|+.|++++|+++
T Consensus 271 ~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 271 KLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccC
Confidence 555555554333 5667777777777777765433 5667777777777777776555 667777777777777777
Q ss_pred CCCCcccccccccceEEcccccccccCccccccccccceecccCCccccC
Q 002010 542 GKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGN 591 (982)
Q Consensus 542 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 591 (982)
+. ..+.++++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 345 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 345 DV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred Cc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 54 457777777777777777776666 77777777777777777764
No 181
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.2e-38 Score=344.13 Aligned_cols=256 Identities=26% Similarity=0.391 Sum_probs=204.4
Q ss_pred hhccccc-ccccccceEEEEEEe---CCCcEEEEEEeccCCCCC-chhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 692 ESLKDEN-IIGKGGAGIVYRGSM---PDGIDVAIKRLVGRGTGG-NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 692 ~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
++|+..+ .||+|+||.||+|.. .+++.||||++....... ..+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4677777 999999999999943 346889999985543322 356789999999999999999999998 5677899
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999974 456999999999999999999999998 99999999999999999999999999987654
Q ss_pred cCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 847 AGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 847 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
.... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+.....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~---------- 238 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-SEVTAMLEKGER---------- 238 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTCC----------
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCC----------
Confidence 3221 11223446788999999998889999999999999999999 9999976433 222222222111
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 239 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 239 ---------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1123344567999999999999999999999999997643
No 182
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.7e-37 Score=353.00 Aligned_cols=250 Identities=23% Similarity=0.265 Sum_probs=193.1
Q ss_pred HHhhcccc-cccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhc-CCCCcccceEeEEEc----CC
Q 002010 690 VLESLKDE-NIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGR-IRHRNIVRLLGYVSN----RD 762 (982)
Q Consensus 690 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~ 762 (982)
+.+.|... +.||+|+||+||+|.. .+++.||||++.. ...+.+|+.++.+ .+||||+++++++.. ..
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 44567765 6899999999999965 4689999999842 2457788888744 489999999998865 56
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---CCCEEEeccc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---DFEAHVADFG 839 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfG 839 (982)
..++||||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecc
Confidence 6899999999999999998655567999999999999999999999998 999999999999997 7899999999
Q ss_pred cchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc---hHHHHHHHhccCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV---DIVRWVRKTTSEV 916 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~---~~~~~~~~~~~~~ 916 (982)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+.......
T Consensus 210 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~ 286 (400)
T 1nxk_A 210 FAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 286 (400)
T ss_dssp TCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC
T ss_pred cccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC
Confidence 99865432 22345678999999999999999999999999999999999999997643321 1222222211111
Q ss_pred CCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 917 SQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
+. + .....+..+.+++.+||+.||++|||++|+++
T Consensus 287 ~~------------~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 287 PN------------P----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CT------------T----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC------------c----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0 01223457889999999999999999999987
No 183
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.1e-37 Score=358.58 Aligned_cols=327 Identities=24% Similarity=0.308 Sum_probs=220.7
Q ss_pred CCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhh
Q 002010 238 GALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTL 317 (982)
Q Consensus 238 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 317 (982)
..+++|++|++++|.+++..+ +.++++|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|++
T Consensus 65 ~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 138 (466)
T 1o6v_A 65 EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNR 138 (466)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred hhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCE
Confidence 334455555555555553332 5555555555555555554332 5555556666666665553322 555555555
Q ss_pred hhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccc
Q 002010 318 LQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFF 397 (982)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~ 397 (982)
|++++|.+.+. + .+..+++|+.|+++ |.+.+.. .+..+++|+.|++++|.+++. ..+..+++|++|++++|.+
T Consensus 139 L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 139 LELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQI 211 (466)
T ss_dssp EEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcc
Confidence 55555555532 2 35566666666664 3333222 266666666666666666532 2244445555555555554
Q ss_pred cccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhcc
Q 002010 398 IGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIG 477 (982)
Q Consensus 398 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~ 477 (982)
.+..| ++.+++|++|++++| .+++. +.....++|+.|++++|++++..+ +.
T Consensus 212 ~~~~~--~~~l~~L~~L~l~~n------------------------~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 212 SDITP--LGILTNLDELSLNGN------------------------QLKDI-GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CCCGG--GGGCTTCCEEECCSS------------------------CCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred ccccc--ccccCCCCEEECCCC------------------------Ccccc-hhhhcCCCCCEEECCCCccccchh--hh
Confidence 44333 344444555555544 44432 222233578888888888886655 88
Q ss_pred CCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceE
Q 002010 478 NLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSIL 557 (982)
Q Consensus 478 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 557 (982)
.+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 99999999999999996544 8899999999999999997655 8899999999999999997766 8899999999
Q ss_pred EcccccccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccC
Q 002010 558 NLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLL 615 (982)
Q Consensus 558 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~ 615 (982)
++++|++++. ..+..+++|+.|++++|++++.+| ...+..+....+.+|++...+
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEECCC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccCCc
Confidence 9999999975 479999999999999999999988 566778888888888877643
No 184
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=347.27 Aligned_cols=267 Identities=25% Similarity=0.357 Sum_probs=204.1
Q ss_pred HHHHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC--CCCcccceEeEEEcC----
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI--RHRNIVRLLGYVSNR---- 761 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~---- 761 (982)
..+.++|+..+.||+|+||.||+|+. .++.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 34567899999999999999999987 4899999998432 234455666666555 899999999998877
Q ss_pred CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc--------CCCcEEecCCCCCcEEEcCCCCE
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD--------CSPLIIHRDVKSNNILLDSDFEA 833 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~~~ivHrDlkp~Nill~~~~~~ 833 (982)
...++||||+++|+|.++++. ..+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCE
T ss_pred CceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCE
Confidence 678999999999999999964 3699999999999999999999987 6 9999999999999999999
Q ss_pred EEeccccchhccccCCcc--cccccccccccccccccccCCCCcc------hhhHHHHHHHHHHHhC----------CCC
Q 002010 834 HVADFGLAKFLQDAGASE--CMSSVAGSYGYIAPEYAYTLKVDEK------SDVYSFGVVLLELIAG----------KKP 895 (982)
Q Consensus 834 kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~elltg----------~~p 895 (982)
||+|||++..+....... ......||+.|+|||++.+..++.+ +||||+||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999997664332211 1234579999999999987766654 9999999999999999 666
Q ss_pred CCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCC--CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 896 VGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLS--GYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
|................... ....+..+ ..+..++..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 330 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCI-----------KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTT-----------SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhh-----------hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence 65532222111111111110 00111111 112366778999999999999999999999999998766
Q ss_pred CCC
Q 002010 974 QSA 976 (982)
Q Consensus 974 ~~~ 976 (982)
+..
T Consensus 331 ~~~ 333 (337)
T 3mdy_A 331 ESQ 333 (337)
T ss_dssp HTT
T ss_pred hhc
Confidence 543
No 185
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.8e-38 Score=353.93 Aligned_cols=265 Identities=23% Similarity=0.281 Sum_probs=205.3
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-----CCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-----HRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~ 764 (982)
.++|++.+.||+|+||.||+|.. .+++.||||++.. .......+..|+.++++++ ||||+++++++...+..
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 46899999999999999999976 5689999999842 2233456778999999986 99999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---------------
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS--------------- 829 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~--------------- 829 (982)
++||||+ +++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999 999999998766677999999999999999999999998 999999999999975
Q ss_pred ----------CCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 002010 830 ----------DFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEF 899 (982)
Q Consensus 830 ----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 899 (982)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999864422 23567899999999999999999999999999999999999999865
Q ss_pred CCCchHHHHHHHhccCCCCC-------Ccccccc-----eeecCCC--------------CCCChHhHHHHHHHHhhccC
Q 002010 900 GDGVDIVRWVRKTTSEVSQP-------SDAASVL-----AVVDPRL--------------SGYPLTGVIHLFKVAMMCVE 953 (982)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~--------------~~~~~~~~~~l~~li~~cl~ 953 (982)
........ +.......+.. ....... ....+.. +..+......+.+++.+||+
T Consensus 263 ~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 341 (360)
T 3llt_A 263 EHMEHLAM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ 341 (360)
T ss_dssp SHHHHHHH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred cHHHHHHH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence 43332222 22221111100 0000000 0000000 00001112567899999999
Q ss_pred CCCCCCCCHHHHHH
Q 002010 954 DESSARPTMREVVH 967 (982)
Q Consensus 954 ~dP~~Rpt~~ell~ 967 (982)
.||++|||++|+++
T Consensus 342 ~dP~~Rpta~elL~ 355 (360)
T 3llt_A 342 IDPTLRPSPAELLK 355 (360)
T ss_dssp SSGGGSCCHHHHTT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999875
No 186
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.1e-38 Score=351.68 Aligned_cols=273 Identities=26% Similarity=0.324 Sum_probs=209.8
Q ss_pred hhcccccccccccceEEEEEEe-----CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEc--CCcc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-----PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN--RDTN 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 764 (982)
++|+..+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|+.++++++||||+++++++.. ....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5789999999999999999973 46889999998433 33344568999999999999999999998874 4568
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
++||||+++++|.+++... ...+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 8999999999999999742 246899999999999999999999998 999999999999999999999999999876
Q ss_pred cccCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 845 QDAGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 845 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
...... .......+++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ............ ....
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~-----~~~~~~~~~~~~-~~~~ 251 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-----EFLRMMGCERDV-PALS 251 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-----HHHHHCC----C-CHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc-----hhhhhccccccc-ccHH
Confidence 533221 123345678889999999998899999999999999999999999864211 011000000000 0000
Q ss_pred ccceeecC-CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 924 SVLAVVDP-RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 924 ~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
.....+.. .....+...+..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11111111 11233455667899999999999999999999999999887653
No 187
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-37 Score=345.82 Aligned_cols=258 Identities=19% Similarity=0.247 Sum_probs=207.6
Q ss_pred HHHHHhhcccc-cccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCC-CCcccceEeEEEcCC
Q 002010 687 AEDVLESLKDE-NIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSNRD 762 (982)
Q Consensus 687 ~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 762 (982)
.+.+.++|... +.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.++.++. ||||+++++++.+.+
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 45667778877 8999999999999965 4689999999865432 234567889999999994 699999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---CCCEEEeccc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---DFEAHVADFG 839 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfG 839 (982)
..++||||+++++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 9999999999999999997656678999999999999999999999998 999999999999988 7899999999
Q ss_pred cchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP 919 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 919 (982)
+++..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||.................. ..
T Consensus 180 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~-- 253 (327)
T 3lm5_A 180 MSRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD-YS-- 253 (327)
T ss_dssp GCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-CC--
T ss_pred cccccCCc---cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc-cC--
Confidence 99876532 2234467999999999999999999999999999999999999999765433222222211111 00
Q ss_pred CcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 920 SDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 254 --------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 254 --------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp --------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0112234457889999999999999999999987
No 188
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.4e-38 Score=359.68 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=197.6
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-------CCCchhhHHHHHHHHhcCCCCcccceEeEEE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-------TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVS 759 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 759 (982)
..+.++|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45678899999999999999999965 568999999985432 1122345889999999999999999999986
Q ss_pred cCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC---CCEEEe
Q 002010 760 NRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD---FEAHVA 836 (982)
Q Consensus 760 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~ 836 (982)
. +..++||||+++++|.+++. +...+++..+..++.|++.|++|||+.+ |+||||||+||+++.+ +.+||+
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred c-CceEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence 4 55799999999999999986 4567999999999999999999999998 9999999999999754 459999
Q ss_pred ccccchhccccCCccccccccccccccccccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhc
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTT 913 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 913 (982)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||............+....
T Consensus 285 DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~ 361 (419)
T 3i6u_A 285 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 361 (419)
T ss_dssp CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC
T ss_pred ecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC
Confidence 99999876532 22345679999999999863 5688899999999999999999999987555444444433222
Q ss_pred cCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 914 SEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.... +......+..+.+++.+||+.||++|||++|+++
T Consensus 362 ~~~~----------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 362 YNFI----------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCCC----------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC----------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1000 0001123457899999999999999999999986
No 189
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-37 Score=363.58 Aligned_cols=254 Identities=24% Similarity=0.317 Sum_probs=208.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.|+..+.||+|+||.||+|+. .+|+.||+|++.... .......+.+|+.++++++||||+++++++.+....|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5788899999999999999976 469999999985432 2234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 769 EYMPNGSLGEMLHGAK--GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||++||+|.+++.... ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999997533 457999999999999999999999998 99999999999999999999999999987653
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...........+........
T Consensus 342 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~---------- 409 (543)
T 3c4z_A 342 GQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA---------- 409 (543)
T ss_dssp TC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC----------
T ss_pred CC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc----------
Confidence 32 223446899999999999999999999999999999999999999987543322222222221100
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTM-----REVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~ell~ 967 (982)
..++...+..+.+++.+||+.||++||++ +|+++
T Consensus 410 -------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 -------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 01223344578899999999999999965 66664
No 190
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2e-38 Score=343.28 Aligned_cols=252 Identities=29% Similarity=0.432 Sum_probs=200.8
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC-CccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR-DTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|+. +|+.||+|++... ...+.+.+|+.++++++||||+++++++.+. +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 46799999999999999999987 5889999988432 3456789999999999999999999987554 47899999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
|+++++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997543334889999999999999999999998 999999999999999999999999999765432
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+.....
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~~~~~~-------------- 232 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYK-------------- 232 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-GHHHHHTTTCC--------------
T ss_pred ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCC--------------
Confidence 123456889999999998899999999999999999998 99999765332 22222211110
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 233 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 233 -----MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 11223345678999999999999999999999999987643
No 191
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-38 Score=357.40 Aligned_cols=272 Identities=22% Similarity=0.317 Sum_probs=196.0
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCC-CCcccceEeEEEcCC--c
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSNRD--T 763 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~ 763 (982)
.+.++|+..+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.+++++. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 4668899999999999999999965 568999999985432 2233456789999999997 999999999997544 6
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.|+||||++ ++|.+++.. ..+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+|+.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 799999996 689999864 47899999999999999999999998 99999999999999999999999999986
Q ss_pred ccccC-------------------Cccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc
Q 002010 844 LQDAG-------------------ASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV 903 (982)
Q Consensus 844 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 903 (982)
+.... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 54211 1122345689999999999876 678999999999999999999999998754433
Q ss_pred hHHHHHHHhccCCCC-------CCcccccc---eee---cCCCCC-------------CChHhHHHHHHHHhhccCCCCC
Q 002010 904 DIVRWVRKTTSEVSQ-------PSDAASVL---AVV---DPRLSG-------------YPLTGVIHLFKVAMMCVEDESS 957 (982)
Q Consensus 904 ~~~~~~~~~~~~~~~-------~~~~~~~~---~~~---~~~~~~-------------~~~~~~~~l~~li~~cl~~dP~ 957 (982)
.+..++......... +....... ... ...... .+...+..+.+++.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 333333222111000 00000000 000 000000 0113345788999999999999
Q ss_pred CCCCHHHHHH
Q 002010 958 ARPTMREVVH 967 (982)
Q Consensus 958 ~Rpt~~ell~ 967 (982)
+|||++|+++
T Consensus 319 ~R~t~~e~l~ 328 (388)
T 3oz6_A 319 KRISANDALK 328 (388)
T ss_dssp GSCCHHHHTT
T ss_pred cCCCHHHHhC
Confidence 9999999987
No 192
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-38 Score=352.14 Aligned_cols=254 Identities=24% Similarity=0.261 Sum_probs=205.2
Q ss_pred HhhcccccccccccceEEEEEEe----CCCcEEEEEEeccCC---CCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCC
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM----PDGIDVAIKRLVGRG---TGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRD 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 762 (982)
.++|+..+.||+|+||.||+|+. .+++.||||++.... .......+.+|+.+++++ +||||+++++++..+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 468999999985432 123345677899999999 6999999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999974 357999999999999999999999998 9999999999999999999999999998
Q ss_pred hccccCCccccccccccccccccccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
.+.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........+........
T Consensus 208 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---- 282 (355)
T 1vzo_A 208 EFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---- 282 (355)
T ss_dssp ECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC----
T ss_pred ecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC----
Confidence 654322 222345679999999999885 3478999999999999999999999976544333333332222110
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARP-----TMREVVH 967 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~ 967 (982)
...+...+..+.+++.+||+.||.+|| |++|+++
T Consensus 283 -------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 283 -------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp -------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 112233445788999999999999999 9999987
No 193
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9e-38 Score=348.55 Aligned_cols=247 Identities=27% Similarity=0.354 Sum_probs=201.2
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC--CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG--GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.+.|+..+.||+|+||.||+|.. .+++.||||++...... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688899999999999999975 57899999998544322 2235688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||++ |++.+++.. ....+++..+..++.|+++|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 99996 688888753 2357999999999999999999999998 999999999999999999999999999765432
Q ss_pred CCcccccccccccccccccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
....||+.|+|||++. ...++.++||||+||++|||++|+.||..................
T Consensus 208 ------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~---------- 271 (348)
T 1u5q_A 208 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP---------- 271 (348)
T ss_dssp ------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC----------
T ss_pred ------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC----------
Confidence 3457899999999884 567899999999999999999999999764332222222111100
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 272 -------~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 272 -------A--LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp -------C--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------C--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 011123456889999999999999999999986
No 194
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.2e-37 Score=336.07 Aligned_cols=252 Identities=21% Similarity=0.273 Sum_probs=203.3
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCC-----CchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTG-----GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
.++|+..+.||+|+||.||+|... +++.||+|.+...... ...+.+.+|+.++++++||||+++++++.++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999764 6899999998654322 2356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC----CEEEecccc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF----EAHVADFGL 840 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~DfG~ 840 (982)
++||||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++ .+||+|||.
T Consensus 84 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999973 457899999999999999999999998 99999999999998877 899999999
Q ss_pred chhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 841 AKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 841 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...+..... ..+
T Consensus 159 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~--~~~- 231 (283)
T 3bhy_A 159 AHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNISAVNY--DFD- 231 (283)
T ss_dssp CEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTTCC--CCC-
T ss_pred ceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHhHhccc--CCc-
Confidence 98664321 23345689999999999999999999999999999999999999976432221 111111110 000
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 232 -------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 232 -------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp -------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0001123456889999999999999999999987
No 195
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-37 Score=338.63 Aligned_cols=246 Identities=25% Similarity=0.371 Sum_probs=204.7
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57899999999999999999764 57889999985432 2334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999974 357899999999999999999999988 999999999999999999999999998755422
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||............. ...
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~--------------- 228 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVD--------------- 228 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTC---------------
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh-ccc---------------
Confidence 2234678999999999999999999999999999999999999997643222211111 100
Q ss_pred ecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 929 VDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 229 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 229 -----LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 0122233457889999999999999999999986
No 196
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=347.47 Aligned_cols=251 Identities=13% Similarity=0.129 Sum_probs=205.2
Q ss_pred hhcccccccccccceEEEEE------EeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC---CCcccceEeEEEcCC
Q 002010 692 ESLKDENIIGKGGAGIVYRG------SMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR---HRNIVRLLGYVSNRD 762 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 762 (982)
++|+..+.||+|+||+||+| ...+++.||+|++.. ....++.+|+.++++++ |+||+++++++..++
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP----ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS----CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC----CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 57889999999999999999 345689999999843 34567888888888886 999999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC----------
Q 002010 763 TNLLLYEYMPNGSLGEMLHGA---KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---------- 829 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---------- 829 (982)
..++||||+++|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccccc
Confidence 999999999999999999642 3467999999999999999999999988 999999999999998
Q ss_pred -CCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHH
Q 002010 830 -DFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRW 908 (982)
Q Consensus 830 -~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~ 908 (982)
++.+||+|||+|+.+.............||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 89999999999976654434445566789999999999999999999999999999999999999986432210
Q ss_pred HHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCC-CCHHHHHHHhcCCCC
Q 002010 909 VRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSAR-PTMREVVHMLANPPQ 974 (982)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-pt~~ell~~L~~~~~ 974 (982)
...+..+... .....+.+++..|++.+|.+| |+++++.+.|++..+
T Consensus 293 ------------------~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 ------------------CKPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ------------------EEECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ------------------eeechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 0011111111 124467899999999999998 577888877765443
No 197
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.5e-38 Score=340.99 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=206.2
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCC--CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTG--GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|... +++.||+|.+...... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357899999999999999999764 5889999998554322 2345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ...+++.++..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999863 357899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
. .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.............. ...
T Consensus 169 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~----------- 232 (294)
T 2rku_A 169 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK---NEY----------- 232 (294)
T ss_dssp T--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT---TCC-----------
T ss_pred c--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh---ccC-----------
Confidence 2 223446789999999999998999999999999999999999999976433222211111 100
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 233 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 -------SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -------CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 112233457889999999999999999999987
No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1e-37 Score=351.12 Aligned_cols=266 Identities=23% Similarity=0.351 Sum_probs=205.4
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
++|+..+.||+|+||.||+|.. .+++.||+|++...........+.+|+.++++++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 5789999999999999999976 468999999986654444556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 849 (982)
+++++|.+++.. ...+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999973 35789999999999999999999985 7 999999999999999999999999999866432
Q ss_pred cccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccC-----CCCCCcc--
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSE-----VSQPSDA-- 922 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-- 922 (982)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........... .......
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-LELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH-HHHHHC-------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhcccccccCCCCCCCcccCCC
Confidence 2234578999999999999999999999999999999999999997643221 11111100000 0000000
Q ss_pred ----------------cccceeecCCCCCC-ChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 ----------------ASVLAVVDPRLSGY-PLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 ----------------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.............. +...+..+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000111111 1224567899999999999999999999986
No 199
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=341.35 Aligned_cols=247 Identities=23% Similarity=0.261 Sum_probs=194.1
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCC-CchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
+.++|+..+.||+|+||+||+|... +++.||||++...... .....+..|+..+.++ +||||+++++++.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4468999999999999999999764 7999999987543222 2233455666666555 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+ +++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 135 v~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 99999 77999988643 357999999999999999999999998 99999999999999999999999999976643
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. .......||+.|+|||++.+ .++.++||||+||++|||++|..|+... .. ...+..... .
T Consensus 210 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~---~~-~~~~~~~~~---~-------- 270 (311)
T 3p1a_A 210 A---GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG---EG-WQQLRQGYL---P-------- 270 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HH-HHHHTTTCC---C--------
T ss_pred C---CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc---cH-HHHHhccCC---C--------
Confidence 2 22344568999999998876 7999999999999999999997766431 11 111111000 0
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 271 -------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 -------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0111223457899999999999999999999986
No 200
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.7e-38 Score=361.86 Aligned_cols=266 Identities=21% Similarity=0.260 Sum_probs=198.4
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC------
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD------ 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 762 (982)
.++|+..+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999964 568999999985432 2233557889999999999999999999997654
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
..|+||||+++ ++.+.+. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 45999999965 5767664 24899999999999999999999998 9999999999999999999999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC--C
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP--S 920 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 920 (982)
..... .......||+.|+|||++.+..|+.++||||+||++|||++|++||.+.........++.......+.. .
T Consensus 213 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 213 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 76532 234557899999999999999999999999999999999999999987544333333333222211000 0
Q ss_pred cccccceeec--CCC--------------CC---CChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 921 DAASVLAVVD--PRL--------------SG---YPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 921 ~~~~~~~~~~--~~~--------------~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
........++ +.. +. ........+.+|+.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 000 00 01112567899999999999999999999987
No 201
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.4e-38 Score=345.26 Aligned_cols=263 Identities=28% Similarity=0.413 Sum_probs=189.3
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++..........++.+|+.++++++||||+++++++..++..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 45789999999999999999965 46899999988555444556678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 770 YMPNGSLGEMLHG------AKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 770 ~~~~~sL~~~l~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
|+++++|.+++.. .....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||.+..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 13456899999999999999999999998 99999999999999999999999999987
Q ss_pred ccccCC---ccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC
Q 002010 844 LQDAGA---SECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP 919 (982)
Q Consensus 844 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 919 (982)
...... ........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.................. ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~ 247 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP---SL 247 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC---CT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC---cc
Confidence 653321 112234578999999999875 56899999999999999999999999875443332222211111 00
Q ss_pred CcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 920 SDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. . ...+ .......+..+.+++.+||+.||.+|||++|+++
T Consensus 248 ~--~---~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 E--T---GVQD---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp T--C-----------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c--c---cccc---chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 0 0001 1122233457889999999999999999999987
No 202
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=338.74 Aligned_cols=259 Identities=23% Similarity=0.301 Sum_probs=205.6
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC---CCCchhhHHHHHHHHhcCCCCcccceEeEEE--cCCc
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG---TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVS--NRDT 763 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~ 763 (982)
+.++|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 457899999999999999999976 468899999985432 2344567899999999999999999999984 4457
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.++||||++++ +.+++.......+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999776 888887666778999999999999999999999998 99999999999999999999999999987
Q ss_pred ccccCCcccccccccccccccccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTLK--VDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD 921 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (982)
..............|++.|+|||++.+.. ++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~------- 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KLFENIGKGSY------- 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHCCC-------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHHhcCCC-------
Confidence 65433334445567999999999987644 478999999999999999999999754221 22222211110
Q ss_pred ccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCC
Q 002010 922 AASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPP 973 (982)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~ 973 (982)
..+...+..+.+++.+||+.||++|||++|+++ .+.+..
T Consensus 231 -------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 231 -------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp -------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred -------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence 112233457889999999999999999999997 444433
No 203
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=345.83 Aligned_cols=272 Identities=24% Similarity=0.295 Sum_probs=204.6
Q ss_pred HHHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCC----CchhhHHHHHHHHhcCCCCcccceEeEEEcCCc
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTG----GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 763 (982)
...++|+..+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999764 5899999998543221 223468899999999999999999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.++||||+++ +|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999975 89888863 3457889999999999999999999998 99999999999999999999999999987
Q ss_pred ccccCCcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
+... ........+|+.|+|||++.+. .++.++||||+||++|||++|.+||....+......+..............
T Consensus 162 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 162 FGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred ccCC--cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence 6533 2233456789999999998764 589999999999999999999999987654444444444333221111000
Q ss_pred -cccce-eecCCCCCCC-----hHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 -ASVLA-VVDPRLSGYP-----LTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 -~~~~~-~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..... ......+..+ ...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000 0001111111 234467999999999999999999999997
No 204
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.1e-37 Score=341.07 Aligned_cols=262 Identities=21% Similarity=0.320 Sum_probs=199.1
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC--CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT--GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.++++++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46799999999999999999975 5799999999854322 22345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 768 YEYMPNGSLGEMLHG--AKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
|||+++++|.+++.. .....+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 23467899999999999999999999998 9999999999999999999999999998765
Q ss_pred ccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASV 925 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (982)
... .......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... ..............+
T Consensus 188 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~------ 257 (310)
T 2wqm_A 188 SKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPP------ 257 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC--HHHHHHHHHTTCSCC------
T ss_pred CCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh--HHHHHHHhhcccCCC------
Confidence 321 2223457899999999999999999999999999999999999999753322 112221111100000
Q ss_pred ceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 926 LAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 258 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 258 ---------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp ---------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 0012234578999999999999999999999999977644
No 205
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=353.38 Aligned_cols=261 Identities=18% Similarity=0.201 Sum_probs=206.5
Q ss_pred hhcccccccccccceEEEEEEeC---------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccc---------
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP---------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVR--------- 753 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 753 (982)
++|+..+.||+|+||.||+|... +++.||+|++... ..+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 57999999999999999999765 3789999998533 46889999999999999998
Q ss_pred ------eEeEEEc-CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEE
Q 002010 754 ------LLGYVSN-RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNIL 826 (982)
Q Consensus 754 ------~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nil 826 (982)
+++++.. +...++||||+ +++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence 6677765 67789999999 999999998654578999999999999999999999998 999999999999
Q ss_pred EcCCC--CEEEeccccchhccccCCc-----ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 002010 827 LDSDF--EAHVADFGLAKFLQDAGAS-----ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEF 899 (982)
Q Consensus 827 l~~~~--~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 899 (982)
++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876543211 1123457999999999999999999999999999999999999999875
Q ss_pred C-CCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 900 G-DGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 900 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
. .................. ..++.. .....+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGP---------FVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCC---------EECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHhccCChhh---------hhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 4 323333332222111100 000000 01122457899999999999999999999999987654
No 206
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.8e-38 Score=339.06 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=207.2
Q ss_pred HHHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEc-------
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN------- 760 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 760 (982)
.+..+|+..+.||+|+||.||+|... +++.||+|++... ...+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 45578999999999999999999764 7999999998543 2457799999999999999999998754
Q ss_pred ---------CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC
Q 002010 761 ---------RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF 831 (982)
Q Consensus 761 ---------~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~ 831 (982)
....++||||+++++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++.++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETT
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCC
Confidence 345789999999999999998655678999999999999999999999998 99999999999999999
Q ss_pred CEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH
Q 002010 832 EAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRK 911 (982)
Q Consensus 832 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 911 (982)
.+||+|||++....... ......|++.|+|||++.+..++.++||||+|+++|||++|..|+... ......
T Consensus 160 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~~~~~~ 230 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------SKFFTD 230 (284)
T ss_dssp EEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------HHHHHH
T ss_pred CEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------HHHHHH
Confidence 99999999998765332 233457899999999999999999999999999999999999887421 111111
Q ss_pred hccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCC
Q 002010 912 TTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQS 975 (982)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~ 975 (982)
.... . .+...+..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 231 ~~~~----------------~---~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 231 LRDG----------------I---ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHTT----------------C---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred hhcc----------------c---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1110 0 1112234688999999999999999999999999776653
No 207
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5e-37 Score=344.30 Aligned_cols=273 Identities=18% Similarity=0.245 Sum_probs=206.4
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcC------
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR------ 761 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 761 (982)
..++|+..+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 357899999999999999999976 5789999998854433 33355788999999999999999999998773
Q ss_pred --CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccc
Q 002010 762 --DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFG 839 (982)
Q Consensus 762 --~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 839 (982)
+..++||||+++ ++.+.+.. ....+++.++..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccch
Confidence 457899999975 77777763 3357999999999999999999999998 9999999999999999999999999
Q ss_pred cchhccccC--Cccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCC
Q 002010 840 LAKFLQDAG--ASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEV 916 (982)
Q Consensus 840 ~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 916 (982)
+++.+.... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||....................
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 998765321 2223345678999999999876 4589999999999999999999999987544333333333222221
Q ss_pred CCCCcccccceeecC---CCC-CCChH-------hHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 917 SQPSDAASVLAVVDP---RLS-GYPLT-------GVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 917 ~~~~~~~~~~~~~~~---~~~-~~~~~-------~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.............+. ... ..... .+..+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 111110000000000 000 00100 1345889999999999999999999987
No 208
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.5e-37 Score=362.17 Aligned_cols=252 Identities=27% Similarity=0.378 Sum_probs=208.5
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC--CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT--GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
+.++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++.+....++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 457899999999999999999976 4789999999855432 3456678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccchh
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAKF 843 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~ 843 (982)
||||+++++|.+++. ....+++..+..++.||+.|++|||+.+ |+||||||+||++ +.++.+||+|||++..
T Consensus 104 v~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 104 VGEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999997 4467999999999999999999999998 9999999999999 5678999999999987
Q ss_pred ccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
+... .......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... .....+.........+
T Consensus 179 ~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~---- 249 (484)
T 3nyv_A 179 FEAS---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELP---- 249 (484)
T ss_dssp BCCC---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSG----
T ss_pred cccc---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCc----
Confidence 6543 22345679999999999876 6999999999999999999999999865332 2233332221111110
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..+.+++.+||+.||.+|||++|+++
T Consensus 250 ------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 250 ------------QWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ------------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 01223457889999999999999999999986
No 209
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6e-39 Score=352.15 Aligned_cols=259 Identities=25% Similarity=0.382 Sum_probs=189.6
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhc--CCCCcccceEeEEEcCC----ccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGR--IRHRNIVRLLGYVSNRD----TNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~ 765 (982)
++|+..+.||+|+||.||+|+. +++.||||++.. .....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEecc----cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 6789999999999999999987 589999998742 345667788888887 78999999999998776 679
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCcEEecCCCCCcEEEcCCCCEEEec
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLH--------HDCSPLIIHRDVKSNNILLDSDFEAHVAD 837 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivHrDlkp~Nill~~~~~~kl~D 837 (982)
+||||+++|+|.+++.. ..+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEee
Confidence 99999999999999964 36788889999999999999999 777 99999999999999999999999
Q ss_pred cccchhccccCCcc--cccccccccccccccccccC------CCCcchhhHHHHHHHHHHHhC----------CCCCCCC
Q 002010 838 FGLAKFLQDAGASE--CMSSVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELIAG----------KKPVGEF 899 (982)
Q Consensus 838 fG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~ 899 (982)
||++.......... ......||+.|+|||++.+. .++.++||||+||++|||++| +.||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 99997765432211 12334799999999998766 445789999999999999999 5555442
Q ss_pred CCC----chHHHHHHHhccCCCCCCcccccceeecCCCCC--CChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 900 GDG----VDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSG--YPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 900 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
... ......+... ...+..+. .....+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 232 VPSDPSVEEMRKVVCEQ---------------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CC-CCCCC-CHHHHTTS---------------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred CCCCccHHHHHHHHHHh---------------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 111 1111111000 01111111 12356678999999999999999999999999999988
Q ss_pred CCC
Q 002010 974 QSA 976 (982)
Q Consensus 974 ~~~ 976 (982)
+..
T Consensus 297 ~~~ 299 (303)
T 3gxj_A 297 QQE 299 (303)
T ss_dssp CC-
T ss_pred hhc
Confidence 754
No 210
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.5e-37 Score=345.66 Aligned_cols=255 Identities=22% Similarity=0.360 Sum_probs=206.0
Q ss_pred HHHHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCc-------hhhHHHHHHHHhcC-CCCcccceEeEE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGN-------DHGFLAEIQTLGRI-RHRNIVRLLGYV 758 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l-~h~niv~~~~~~ 758 (982)
..+.++|+..+.||+|+||.||+|... +|+.||||++........ .+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 455678999999999999999999764 799999999855432211 34578899999999 799999999999
Q ss_pred EcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEecc
Q 002010 759 SNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADF 838 (982)
Q Consensus 759 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 838 (982)
......++||||+++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEec
Confidence 999999999999999999999973 357999999999999999999999998 999999999999999999999999
Q ss_pred ccchhccccCCccccccccccccccccccccc------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHh
Q 002010 839 GLAKFLQDAGASECMSSVAGSYGYIAPEYAYT------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 839 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 912 (982)
|++..+... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...
T Consensus 245 G~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~i~~~ 320 (365)
T 2y7j_A 245 GFSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LMLRMIMEG 320 (365)
T ss_dssp TTCEECCTT---CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred CcccccCCC---cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhC
Confidence 999876533 22345679999999998863 35889999999999999999999999764322 222222221
Q ss_pred ccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 913 TSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+ . ....+..+.+++.+||+.||++|||++|+++
T Consensus 321 ~~~~~~~------------~----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 321 QYQFSSP------------E----WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CCCCCHH------------H----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCc------------c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1100000 0 0112346889999999999999999999986
No 211
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-37 Score=347.00 Aligned_cols=249 Identities=24% Similarity=0.301 Sum_probs=206.3
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCC--CchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTG--GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357889999999999999999764 5889999998554322 2345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ...+++.++..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999873 357899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
. .......|++.|+|||++.+..++.++||||+|+++|||++|+.||............. ....
T Consensus 195 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~------------- 258 (335)
T 2owb_A 195 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-KNEY------------- 258 (335)
T ss_dssp T--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-HTCC-------------
T ss_pred c--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh-cCCC-------------
Confidence 2 22345678999999999999999999999999999999999999997643222222211 1110
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 259 -------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 -------SIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112223346889999999999999999999987
No 212
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.2e-38 Score=341.04 Aligned_cols=261 Identities=23% Similarity=0.336 Sum_probs=206.0
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEc--CCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN--RDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 766 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46799999999999999999976 4689999999865432 2344578899999999999999999998754 567899
Q ss_pred EEeccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 767 LYEYMPNGSLGEMLHGA--KGGHLKWETRYRIALEAAKGLCYLHHDC--SPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
||||+++++|.+++... ....+++..++.++.|++.|++|||+.+ ..+|+||||||+||+++.++.+||+|||.+.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999742 2345999999999999999999999875 2349999999999999999999999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
...... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.....
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~i~~~~~-------- 233 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKF-------- 233 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC--------
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-HHHHHHHhhccc--------
Confidence 765321 122345689999999999998999999999999999999999999976532 222222222111
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||++|+++.+..-.
T Consensus 234 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 234 -----------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp -----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred -----------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 1122334457899999999999999999999998765443
No 213
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.6e-37 Score=338.26 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=200.5
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCC-CCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
+.++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999764 799999999865432 33456788999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC--------------
Q 002010 767 LYEYMPNGSLGEMLHGAK--GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD-------------- 830 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~-------------- 830 (982)
||||+++++|.+++.... ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997432 257899999999999999999999998 9999999999999844
Q ss_pred -----CCEEEeccccchhccccCCcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCch
Q 002010 831 -----FEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVD 904 (982)
Q Consensus 831 -----~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 904 (982)
..+||+|||.+...... ....||+.|+|||++.+. .++.++||||+|+++|+|++|.+|+... ..
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~ 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---DQ 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HH
T ss_pred ccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---hH
Confidence 47999999999866532 234589999999998765 5678999999999999999999876432 11
Q ss_pred HHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 905 IVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.... ... ..+..+...+..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~-~~~-------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 WHEI-RQG-------------------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHH-HTT-------------------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-HcC-------------------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111 111 111223334457899999999999999999999986
No 214
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.8e-37 Score=346.29 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=201.5
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHH-HhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQT-LGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|+..+.||+|+||.||+|.. .+|+.||||++..........++..|..+ ++.++||||+++++++.+++..++|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 5688889999999999999975 57899999998655444445566666666 777899999999999999999999999
Q ss_pred ccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 770 YMPNGSLGEMLHGA--KGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 770 ~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
|+++ +|.+++... ....+++..+..++.||+.||+|||++ + |+||||||+||+++.++.+||+|||++.....
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 9975 999888632 456899999999999999999999987 8 99999999999999999999999999987643
Q ss_pred cCCcccccccccccccccccccc----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAY----TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
. .......||+.|+|||++. ...++.++||||+||++|||++|+.||...................
T Consensus 207 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 276 (340)
T 3an0_A 207 S---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP------- 276 (340)
T ss_dssp H---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC-------
T ss_pred c---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCC-------
Confidence 2 2223357899999999964 3478999999999999999999999998644332222221111110
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 277 -----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 -----------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -----------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----------CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0011223457899999999999999999999986
No 215
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.7e-37 Score=339.10 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=204.7
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
.+.++|+..+.||+|+||.||+|.. .+|+.||+|++... .......+.+|+.++++++||||+++++++.+....++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS-PAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc-cccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 3567899999999999999999976 46899999998543 223345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccchhc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAKFL 844 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 844 (982)
|||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||++ +.++.+||+|||++...
T Consensus 85 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 85 MQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp ECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEcCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999999863 357899999999999999999999998 9999999999999 77899999999999754
Q ss_pred cccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 845 QDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 845 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+........
T Consensus 160 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~------- 227 (304)
T 2jam_A 160 QNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYYEFE------- 227 (304)
T ss_dssp CCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCC-------
T ss_pred CCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCC-------
Confidence 321 223456899999999999999999999999999999999999999764332 22222222111000
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 228 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 228 ---------SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ---------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ---------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0112233457899999999999999999999986
No 216
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3e-37 Score=336.25 Aligned_cols=250 Identities=27% Similarity=0.432 Sum_probs=200.8
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEc----CCccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN----RDTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~ 765 (982)
+.|+..+.||+|+||.||+|.. .++..||+|.+.... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 4578888999999999999965 568899999985443 23345678899999999999999999998865 34579
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc-CCCCEEEeccccchhc
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-SDFEAHVADFGLAKFL 844 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfG~a~~~ 844 (982)
+||||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ .+|+||||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999973 357899999999999999999999764 3499999999999997 7899999999999754
Q ss_pred cccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 845 QDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 845 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||............+.......
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 249 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-------- 249 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--------
T ss_pred ccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc--------
Confidence 422 2234578999999998764 589999999999999999999999987554443333322211100
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 250 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 250 ----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011122346899999999999999999999986
No 217
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.8e-37 Score=335.52 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=197.0
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57889999999999999999764 79999999985432 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~- 164 (276)
T 2h6d_A 91 EYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 164 (276)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC-
Confidence 99999999999973 356899999999999999999999998 999999999999999999999999999876532
Q ss_pred CcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.......+++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 165 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~------------- 228 (276)
T 2h6d_A 165 --EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-TLFKKIRGGVF------------- 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC-------------
T ss_pred --cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHhhcCcc-------------
Confidence 22234578999999999988765 68999999999999999999999754221 22222211110
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 229 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 -------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 112223457889999999999999999999987
No 218
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3e-37 Score=340.77 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=196.5
Q ss_pred hhccc-ccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKD-ENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~-~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.|++ .+.||+|+||.||+|.. .+++.||||++... .......+.+|+.++.++ +||||+++++++.+++..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 56777 47899999999999975 57899999998543 344567789999999885 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC---EEEeccccchhcc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE---AHVADFGLAKFLQ 845 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~DfG~a~~~~ 845 (982)
||+++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999999974 357899999999999999999999998 999999999999998766 9999999997654
Q ss_pred ccCC-----ccccccccccccccccccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc------------
Q 002010 846 DAGA-----SECMSSVAGSYGYIAPEYAYT-----LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV------------ 903 (982)
Q Consensus 846 ~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~------------ 903 (982)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 2211 111234568999999999875 558899999999999999999999997643321
Q ss_pred --hHHHHHHHhccCCCCCCcccccceeecCCCCCCC----hHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 904 --DIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYP----LTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 904 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..... ..+ ...+..+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~i~~~~~--------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 246 QNMLFESIQEGKY--------------------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHCCC--------------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhccCc--------------------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 01111111000 111 123457899999999999999999999998
No 219
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-37 Score=337.58 Aligned_cols=252 Identities=24% Similarity=0.344 Sum_probs=188.6
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhh-HHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHG-FLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++..........+ +.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 36799999999999999999975 5789999999855433333333 344455578889999999999999999999999
Q ss_pred eccCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 769 EYMPNGSLGEMLHG--AKGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 769 e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
||++ ++|.+++.. .+...+++..+..++.|++.|++|||++ + |+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9996 588887753 2456899999999999999999999998 8 9999999999999999999999999998765
Q ss_pred ccCCccccccccccccccccccc----ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYA----YTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD 921 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (982)
.. .......||+.|+|||++ .+..++.++||||+|+++|||++|+.||....................
T Consensus 162 ~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----- 233 (290)
T 3fme_A 162 DD---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ----- 233 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-----
T ss_pred cc---ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC-----
Confidence 33 222345789999999996 566789999999999999999999999976443332222221111100
Q ss_pred ccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 922 AASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 234 -------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 -------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 011223457899999999999999999999986
No 220
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-37 Score=360.70 Aligned_cols=254 Identities=26% Similarity=0.342 Sum_probs=206.9
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
..+.++|++.+.||+|+||+||+|.. .+++.||||++.... .......+.+|+.++++++||||+++++++.+....+
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence 45678999999999999999999975 478999999985432 2345677899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc---CCCCEEEeccccch
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD---SDFEAHVADFGLAK 842 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~ 842 (982)
+||||+++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++ .++.+||+|||+++
T Consensus 98 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999998863 357999999999999999999999998 99999999999995 45679999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
.+... .......||+.|+|||++.+ .++.++||||+||++|+|++|++||...... .....+.........+
T Consensus 173 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~--- 244 (486)
T 3mwu_A 173 CFQQN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLP--- 244 (486)
T ss_dssp TBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSG---
T ss_pred ECCCC---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCc---
Confidence 76532 23345679999999999876 5999999999999999999999999765332 2222222221111110
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..+.+++.+||+.||.+|||++|+++
T Consensus 245 -------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 245 -------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -------------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01123457889999999999999999999987
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.4e-37 Score=342.40 Aligned_cols=255 Identities=24% Similarity=0.320 Sum_probs=202.3
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-------CCchhhHHHHHHHHhcCCCCcccceEeEEE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-------GGNDHGFLAEIQTLGRIRHRNIVRLLGYVS 759 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 759 (982)
..+.++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 44567899999999999999999965 4688999999854321 122346889999999999999999999987
Q ss_pred cCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC---EEEe
Q 002010 760 NRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE---AHVA 836 (982)
Q Consensus 760 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~ 836 (982)
.+. .++||||+++++|.+++. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++. +||+
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEEC
T ss_pred CCc-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEc
Confidence 655 899999999999999986 4568999999999999999999999998 999999999999987654 9999
Q ss_pred ccccchhccccCCcccccccccccccccccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhc
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTT 913 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 913 (982)
|||++...... .......||+.|+|||++. ...++.++||||+||++|+|++|..||............+....
T Consensus 160 Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 160 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236 (322)
T ss_dssp CCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC
T ss_pred cCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc
Confidence 99999865432 2223456899999999874 56789999999999999999999999987655444444433321
Q ss_pred cCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 914 SEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.... +......+..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~----------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 YNFI----------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCC----------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccC----------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1000 0001123457899999999999999999999985
No 222
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=334.58 Aligned_cols=251 Identities=26% Similarity=0.416 Sum_probs=200.0
Q ss_pred hcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEecc
Q 002010 693 SLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 693 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
.|.....||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 455556899999999999975 56889999998544 3445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC-CCCEEEeccccchhccccCC
Q 002010 772 PNGSLGEMLHGAK-GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS-DFEAHVADFGLAKFLQDAGA 849 (982)
Q Consensus 772 ~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~~~~~~~ 849 (982)
++++|.+++.... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++. ++.+||+|||.+.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999997543 245678999999999999999999998 999999999999987 8999999999998664321
Q ss_pred cccccccccccccccccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 850 SECMSSVAGSYGYIAPEYAYTLK--VDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 850 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
.......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||..................
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------- 243 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV------------- 243 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCC-------------
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccc-------------
Confidence 2234467899999999987643 889999999999999999999999764332221111111111
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.+..+...+..+.+++.+||+.||++|||++|+++
T Consensus 244 -----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 -----HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -----CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -----cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11223344557899999999999999999999986
No 223
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.7e-37 Score=336.65 Aligned_cols=261 Identities=20% Similarity=0.252 Sum_probs=203.6
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEE-EcCCccEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYV-SNRDTNLLL 767 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv 767 (982)
+.++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+|+.++++++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 346899999999999999999975 678999999864432 234578999999999988877777665 566778999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccchhc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAKFL 844 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 844 (982)
|||+ +++|.+++... ...+++..+..++.||+.|++|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 84 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999 99999999742 356999999999999999999999998 9999999999999 78899999999999876
Q ss_pred cccCCc-----ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc---hHHHHHHHhccCC
Q 002010 845 QDAGAS-----ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV---DIVRWVRKTTSEV 916 (982)
Q Consensus 845 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~---~~~~~~~~~~~~~ 916 (982)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............+
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence 543221 12345678999999999999999999999999999999999999998744322 1112111111100
Q ss_pred CCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 917 SQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
........+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 239 ----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 239 ----------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp ----------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred ----------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 000111224578999999999999999999999999876543
No 224
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.5e-37 Score=359.65 Aligned_cols=253 Identities=26% Similarity=0.371 Sum_probs=202.3
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 766 (982)
.+.++|+..+.||+|+||+||+|.. .++..||+|++.... .......+.+|+.++++++||||+++++++.+....++
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4567899999999999999999976 468899999986543 23445678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC---CCEEEeccccchh
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD---FEAHVADFGLAKF 843 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~ 843 (982)
||||+++|+|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.. +.+||+|||++..
T Consensus 114 v~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 114 VMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999998863 357999999999999999999999998 9999999999999764 5599999999987
Q ss_pred ccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
+... .......||+.|+|||++. ..++.++||||+||++|+|++|.+||...... .....+.........+.
T Consensus 189 ~~~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~--- 260 (494)
T 3lij_A 189 FENQ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPE--- 260 (494)
T ss_dssp CBTT---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGG---
T ss_pred CCCC---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchh---
Confidence 6532 2334567999999999876 46999999999999999999999999865433 22333322221111110
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
....+..+.+++.+||+.||.+|||++|+++
T Consensus 261 -------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 261 -------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------------cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0122346889999999999999999999875
No 225
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2e-37 Score=347.27 Aligned_cols=267 Identities=20% Similarity=0.295 Sum_probs=211.0
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCc----------------hhhHHHHHHHHhcCCCCcccce
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGN----------------DHGFLAEIQTLGRIRHRNIVRL 754 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~E~~~l~~l~h~niv~~ 754 (982)
.++|+..+.||+|+||.||+|.. +++.||+|++........ ...+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999988 999999999854322111 1778999999999999999999
Q ss_pred EeEEEcCCccEEEEeccCCCCHHHH------hhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCcEEecCCCCCcEEE
Q 002010 755 LGYVSNRDTNLLLYEYMPNGSLGEM------LHGAKGGHLKWETRYRIALEAAKGLCYLHH-DCSPLIIHRDVKSNNILL 827 (982)
Q Consensus 755 ~~~~~~~~~~~lv~e~~~~~sL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlkp~Nill 827 (982)
++++.+.+..++||||+++++|.++ +.......+++..+..++.|++.|++|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999999 654446789999999999999999999998 87 9999999999999
Q ss_pred cCCCCEEEeccccchhccccCCcccccccccccccccccccccC-CCCc-chhhHHHHHHHHHHHhCCCCCCCCCCCchH
Q 002010 828 DSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTL-KVDE-KSDVYSFGVVLLELIAGKKPVGEFGDGVDI 905 (982)
Q Consensus 828 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~elltg~~p~~~~~~~~~~ 905 (982)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||.........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999866432 33456789999999999877 6666 999999999999999999999876554444
Q ss_pred HHHHHHhccCCCCCCcccccce-eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 906 VRWVRKTTSEVSQPSDAASVLA-VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+....... +........ .............+..+.+++.+||+.||.+|||++|+++
T Consensus 262 ~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNNIRTKNIEY--PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHTSCCCCC--CCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhccCcCC--ccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 44433322111 111000000 0000001112345567899999999999999999999987
No 226
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=350.01 Aligned_cols=272 Identities=22% Similarity=0.305 Sum_probs=202.8
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCC------
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD------ 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 762 (982)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... ....+.+.+|+.++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 36789999999999999999965 5699999999854322 223456889999999999999999999997653
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
..|+||||+ +++|.+++.. ..+++..+..++.||++|++|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 459999999 8899999964 46899999999999999999999998 9999999999999999999999999998
Q ss_pred hccccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC--
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP-- 919 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 919 (982)
.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||........+..+...........
T Consensus 177 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 177 QADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp ECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 6542 2345678999999999877 6799999999999999999999999986543333333332222111000
Q ss_pred ---C-cccc----cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCCC
Q 002010 920 ---S-DAAS----VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPPQ 974 (982)
Q Consensus 920 ---~-~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~~ 974 (982)
. .... ........+.......+..+.+++.+||+.||++|||++|+++ .++....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 0 0000 0000011111223344567899999999999999999999998 4555443
No 227
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.5e-37 Score=344.39 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=209.5
Q ss_pred HHHHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhc--CCCCcccceEeEEEcCC---
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGR--IRHRNIVRLLGYVSNRD--- 762 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~--- 762 (982)
..+.++|+..+.||+|+||.||+|.. +++.||||++.. .....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 44567899999999999999999987 689999999843 234567888888877 68999999999998876
Q ss_pred -ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCcEEecCCCCCcEEEcCCCCE
Q 002010 763 -TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLH--------HDCSPLIIHRDVKSNNILLDSDFEA 833 (982)
Q Consensus 763 -~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivHrDlkp~Nill~~~~~~ 833 (982)
..++||||+++|+|.+++.. ..+++..++.++.|++.|++||| +.+ |+||||||+||+++.++.+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCE
T ss_pred ceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCE
Confidence 78999999999999999964 36899999999999999999999 777 9999999999999999999
Q ss_pred EEeccccchhccccCCcc--cccccccccccccccccccC------CCCcchhhHHHHHHHHHHHhC----------CCC
Q 002010 834 HVADFGLAKFLQDAGASE--CMSSVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELIAG----------KKP 895 (982)
Q Consensus 834 kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p 895 (982)
||+|||++.......... ......||+.|+|||++.+. .++.++||||+|+++|||++| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998765432211 23455799999999998765 344789999999999999999 778
Q ss_pred CCCCCCCc-hHHHHHHHhccCCCCCCcccccceeecCCCCC--CChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 896 VGEFGDGV-DIVRWVRKTTSEVSQPSDAASVLAVVDPRLSG--YPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 896 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
|....... ....+........ ..+.++. .....+..+.+++.+||+.||++|||++||++.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQK------------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC------------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCcCcccHHHHHHHHHHHH------------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 86643222 1222222111100 1111111 1235667899999999999999999999999999876
Q ss_pred CCC
Q 002010 973 PQS 975 (982)
Q Consensus 973 ~~~ 975 (982)
.+.
T Consensus 335 ~~~ 337 (342)
T 1b6c_B 335 SQQ 337 (342)
T ss_dssp HHT
T ss_pred HHH
Confidence 543
No 228
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=338.07 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=201.6
Q ss_pred HHHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
...+.|+..+.||+|+||.||+|... +|+.||+|.+... .....+.+|+.++++++||||+++++++......++|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT---SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch---HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 34567999999999999999999764 5899999998543 3456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 103 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 103 MEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp EECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred eecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 999999999999863 3467999999999999999999999998 999999999999999999999999999866532
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccce
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLA 927 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (982)
........|++.|+|||++.+..++.++||||+|+++|+|++|+.||........... ...... .
T Consensus 179 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~--~---------- 243 (314)
T 3com_A 179 --MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM-IPTNPP--P---------- 243 (314)
T ss_dssp --BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCC--C----------
T ss_pred --ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HhcCCC--c----------
Confidence 1223446789999999999999999999999999999999999999976433222111 111110 0
Q ss_pred eecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 928 VVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. ...+...+..+.+++.+||+.||.+|||++|+++
T Consensus 244 ----~-~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 244 ----T-FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----C-CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----c-cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 0112233457899999999999999999999986
No 229
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-37 Score=346.78 Aligned_cols=270 Identities=22% Similarity=0.343 Sum_probs=204.1
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCC-chhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGG-NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|... +++.||+|++....... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 468999999999999999999764 58999999985543322 2345779999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999998876 3457999999999999999999999998 9999999999999999999999999998765322
Q ss_pred CcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc----cc
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD----AA 923 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 923 (982)
.......|++.|+|||++.+. .++.++||||+||++|+|++|+.||....+...............+.... ..
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 223456789999999998875 68999999999999999999999998765444443333322211000000 00
Q ss_pred ccceeecCCCC------CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 924 SVLAVVDPRLS------GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......+... ......+..+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000001111 011234567999999999999999999999876
No 230
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.2e-37 Score=335.52 Aligned_cols=259 Identities=20% Similarity=0.246 Sum_probs=206.0
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEE-EcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYV-SNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+|+.++++++|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 36799999999999999999975 679999999885432 234688999999999998877766655 5567779999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccchhcc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~ 845 (982)
||+ +++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||++ +.++.+||+|||++....
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Eec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 999 99999999743 357999999999999999999999998 9999999999999 478999999999998765
Q ss_pred ccCCc-----ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC---chHHHHHHHhccCCC
Q 002010 846 DAGAS-----ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDG---VDIVRWVRKTTSEVS 917 (982)
Q Consensus 846 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~ 917 (982)
..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .............+
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 238 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP- 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-
Confidence 43221 1234567999999999999999999999999999999999999999874332 12222222111100
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
....+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 239 ---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 239 ---------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp ---------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ---------------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 00011223457899999999999999999999999997654
No 231
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.5e-37 Score=339.10 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=201.3
Q ss_pred HHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
..+.|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+.++++++||||+++++++..++..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 3467999999999999999999764 5889999988443 4455678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 170 (302)
T 2j7t_A 96 EFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT- 170 (302)
T ss_dssp ECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-
T ss_pred EeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc-
Confidence 99999999999864 2356999999999999999999999998 999999999999999999999999998654321
Q ss_pred Cccccccccccccccccccc-----ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 849 ASECMSSVAGSYGYIAPEYA-----YTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
........|++.|+|||++ .+..++.++||||+|+++|+|++|+.||...................
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 241 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT-------- 241 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--------
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcc--------
Confidence 1112345789999999988 36678999999999999999999999998654332222222111110
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 242 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 ----------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ----------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ----------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0112334457899999999999999999999986
No 232
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=349.62 Aligned_cols=272 Identities=27% Similarity=0.373 Sum_probs=195.9
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHH--HhcCCCCcccceEeEEEc-----CCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQT--LGRIRHRNIVRLLGYVSN-----RDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~-----~~~ 763 (982)
.++|+..+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 36789999999999999999977 7899999998432 23344445444 445899999999986542 235
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc---------CCCcEEecCCCCCcEEEcCCCCEE
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD---------CSPLIIHRDVKSNNILLDSDFEAH 834 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------~~~~ivHrDlkp~Nill~~~~~~k 834 (982)
.++||||+++|+|.+++... ..++..+..++.||+.||+|||+. + |+||||||+||+++.++.+|
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEE
T ss_pred EEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEE
Confidence 68999999999999999643 458999999999999999999988 7 99999999999999999999
Q ss_pred EeccccchhccccCC------ccccccccccccccccccccc-------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 002010 835 VADFGLAKFLQDAGA------SECMSSVAGSYGYIAPEYAYT-------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGD 901 (982)
Q Consensus 835 l~DfG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg~~p~~~~~~ 901 (982)
|+|||++..+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 999999987653211 122234579999999999886 4567899999999999999999777644222
Q ss_pred CchHHHHHHHhccCCCCCCccc--ccceeecCCCC---CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 902 GVDIVRWVRKTTSEVSQPSDAA--SVLAVVDPRLS---GYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...............+...... .......+.++ ......+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 1111000000000000000000 00000111111 122346678999999999999999999999999887644
No 233
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=356.95 Aligned_cols=336 Identities=19% Similarity=0.174 Sum_probs=292.7
Q ss_pred cCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhc
Q 002010 232 GIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAA 311 (982)
Q Consensus 232 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~ 311 (982)
.+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..
T Consensus 25 ~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 102 (477)
T 2id5_A 25 AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTG 102 (477)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTT
T ss_pred cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccC
Confidence 5676554 68999999999999988999999999999999999999988999999999999999999999777778999
Q ss_pred ccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceee
Q 002010 312 LKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLI 391 (982)
Q Consensus 312 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ 391 (982)
+++|++|+|++|++.+..|..|..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|+
T Consensus 103 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 182 (477)
T 2id5_A 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 182 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEe
Confidence 99999999999999999999999999999999999999998899999999999999999999987777899999999999
Q ss_pred cccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCC
Q 002010 392 LMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGK 471 (982)
Q Consensus 392 l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~ 471 (982)
+++|.+.+..+..+..+++|++|++++|.+.+.+|...... .+|+.|++++|++++.
T Consensus 183 l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~-----------------------~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 183 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG-----------------------LNLTSLSITHCNLTAV 239 (477)
T ss_dssp EESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT-----------------------CCCSEEEEESSCCCSC
T ss_pred CCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccC-----------------------ccccEEECcCCccccc
Confidence 99999999999999999999999999998877766544332 3677888888888866
Q ss_pred CchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccc
Q 002010 472 IPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKL 551 (982)
Q Consensus 472 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 551 (982)
.+..|..+++|+.|+|++|++++..+..+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 319 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCG
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCC
Confidence 66788999999999999999997777788899999999999999998889999999999999999999998777788999
Q ss_pred cccceEEcccccccccCccccccccccceecccCCccccCCC
Q 002010 552 IDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 552 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
++|+.|+|++|.++...+. ..-...+..+++.++.....-|
T Consensus 320 ~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 320 GNLETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GGCCEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEES
T ss_pred cccCEEEccCCCccCccch-HhHHhhhhccccCccCceeCCc
Confidence 9999999999999853321 1112233445555655544444
No 234
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.6e-37 Score=338.78 Aligned_cols=270 Identities=21% Similarity=0.266 Sum_probs=209.1
Q ss_pred HhhcccccccccccceEEEEEEe--CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcC---CCCcccceEeEEE-----
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM--PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRI---RHRNIVRLLGYVS----- 759 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~----- 759 (982)
.++|+..+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 36799999999999999999976 4688999999854432 23344677888887776 8999999999987
Q ss_pred cCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccc
Q 002010 760 NRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFG 839 (982)
Q Consensus 760 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 839 (982)
.....++||||++ ++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCc
Confidence 5567899999997 69999998766667999999999999999999999998 9999999999999999999999999
Q ss_pred cchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP 919 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 919 (982)
++...... .......|++.|+|||++.+..++.++||||+|+++|||++|+.||............+..........
T Consensus 166 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 166 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp SCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred ccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 99865432 223456789999999999999999999999999999999999999987544433333333222111000
Q ss_pred --Cccc----ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 920 --SDAA----SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 920 --~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.... .................+..+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00000001111233445667899999999999999999999995
No 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=343.68 Aligned_cols=272 Identities=25% Similarity=0.342 Sum_probs=207.7
Q ss_pred hhcccccccccccceEEEEEEe-----CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCC--cc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-----PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD--TN 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 764 (982)
++|+..+.||+|+||.||+|+. .+++.||+|++.. ......+.+.+|+.++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS-CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 5688899999999999999973 4688999999854 33444567899999999999999999999886644 68
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
++||||+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 9999999999999999753 356899999999999999999999988 999999999999999999999999999876
Q ss_pred cccCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 845 QDAGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 845 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
...... .......++..|+|||++.+..++.++||||+|+++|||++|..|+.... ....+.. ...........
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~--~~~~~~~---~~~~~~~~~~~ 270 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--AEFMRMI---GNDKQGQMIVF 270 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH--HHHHHHH---CTTCCTHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH--HHHHHhh---ccccchhhhHH
Confidence 543221 11233457778999999998889999999999999999999999986421 1111110 00000000000
Q ss_pred ccceeecC-CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 924 SVLAVVDP-RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 924 ~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
.+...+.. .....+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00000100 111223445568999999999999999999999999998654
No 236
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-37 Score=348.39 Aligned_cols=266 Identities=22% Similarity=0.248 Sum_probs=201.3
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC-------
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR------- 761 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 761 (982)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 446899999999999999999965 6799999999854322 223799999999999999999998443
Q ss_pred -------------------------------CccEEEEeccCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh
Q 002010 762 -------------------------------DTNLLLYEYMPNGSLGEMLHG--AKGGHLKWETRYRIALEAAKGLCYLH 808 (982)
Q Consensus 762 -------------------------------~~~~lv~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH 808 (982)
...++||||++ ++|.+.+.. .....+++..+..++.||++|++|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33789999997 587777653 24568999999999999999999999
Q ss_pred hcCCCcEEecCCCCCcEEEc-CCCCEEEeccccchhccccCCcccccccccccccccccccccC-CCCcchhhHHHHHHH
Q 002010 809 HDCSPLIIHRDVKSNNILLD-SDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVL 886 (982)
Q Consensus 809 ~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il 886 (982)
+.+ |+||||||+||+++ .++.+||+|||+|+.+... .......+|+.|+|||++.+. .++.++||||+||++
T Consensus 159 ~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 SLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS---EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp TTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTT---SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCC---CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 988 99999999999997 6889999999999876533 223456789999999998765 489999999999999
Q ss_pred HHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc--ccccceeecCCCC------CCChHhHHHHHHHHhhccCCCCCC
Q 002010 887 LELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD--AASVLAVVDPRLS------GYPLTGVIHLFKVAMMCVEDESSA 958 (982)
Q Consensus 887 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~ 958 (982)
|||++|+.||......+....++............ ........-+... ..+...+..+.+++.+||+.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 99999999998765544444444433321100000 0000000000000 133445667899999999999999
Q ss_pred CCCHHHHHH
Q 002010 959 RPTMREVVH 967 (982)
Q Consensus 959 Rpt~~ell~ 967 (982)
|||++|+++
T Consensus 313 R~t~~e~l~ 321 (383)
T 3eb0_A 313 RINPYEAMA 321 (383)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHhc
Confidence 999999985
No 237
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.5e-37 Score=370.84 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=199.9
Q ss_pred cccccccceEEEEEEe---CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEeccCC
Q 002010 698 NIIGKGGAGIVYRGSM---PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPN 773 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 773 (982)
+.||+|+||.||+|.+ ..++.||||+++.... ....+++.+|+.++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999954 3467899999865432 2335679999999999999999999999864 568899999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCC-ccc
Q 002010 774 GSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGA-SEC 852 (982)
Q Consensus 774 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~ 852 (982)
|+|.+++. +...+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+..... ...
T Consensus 454 g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999997 3467999999999999999999999998 99999999999999999999999999987754322 222
Q ss_pred ccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecC
Q 002010 853 MSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDP 931 (982)
Q Consensus 853 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (982)
.....+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+.....
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-~~~~~i~~~~~----------------- 590 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-EVTAMLEKGER----------------- 590 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCC-----------------
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCC-----------------
Confidence 333456789999999999999999999999999999998 99999765332 22222222111
Q ss_pred CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 932 RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 932 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
...+..++..+.++|.+||+.||++|||+++|++.|+.+
T Consensus 591 --~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 591 --MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 122334556899999999999999999999999998754
No 238
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7.1e-37 Score=351.30 Aligned_cols=265 Identities=22% Similarity=0.243 Sum_probs=205.5
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC------CCCcccceEeEEEcCCc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI------RHRNIVRLLGYVSNRDT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~ 763 (982)
..+|+..+.||+|+||.||+|.. .+++.||||++... ......+.+|+.+++.+ +|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 45799999999999999999965 45899999998432 22335677788888777 57799999999999999
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC--EEEeccccc
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE--AHVADFGLA 841 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a 841 (982)
.++||||+. ++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999995 69999998766677999999999999999999999998 999999999999999887 999999999
Q ss_pred hhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC---
Q 002010 842 KFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ--- 918 (982)
Q Consensus 842 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 918 (982)
..... ......||+.|+|||++.+..++.++||||+||++|||++|++||........+..++.........
T Consensus 250 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 250 CYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324 (429)
T ss_dssp EETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred eecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 75432 2334678999999999999999999999999999999999999998765444444333322211100
Q ss_pred --------------CCccccccee-----------------ecCCCC-----CCChHhHHHHHHHHhhccCCCCCCCCCH
Q 002010 919 --------------PSDAASVLAV-----------------VDPRLS-----GYPLTGVIHLFKVAMMCVEDESSARPTM 962 (982)
Q Consensus 919 --------------~~~~~~~~~~-----------------~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 962 (982)
+... ..... ..+... ..+......+.+|+.+||+.||++|||+
T Consensus 325 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta 403 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYC-TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP 403 (429)
T ss_dssp TBTTHHHHBCTTSCBTTS-CEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred hhhhhhhccCCCCCcccc-cccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCH
Confidence 0000 00000 000000 0111224568999999999999999999
Q ss_pred HHHHH
Q 002010 963 REVVH 967 (982)
Q Consensus 963 ~ell~ 967 (982)
+|+++
T Consensus 404 ~e~L~ 408 (429)
T 3kvw_A 404 GQALR 408 (429)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99997
No 239
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.1e-36 Score=338.66 Aligned_cols=261 Identities=21% Similarity=0.251 Sum_probs=202.2
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCcccceEeEEEc--CCccEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSN--RDTNLLL 767 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 767 (982)
++|+..+.||+|+||.||+|.. .+++.||+|++.. ...+.+.+|+.++++++ ||||+++++++.+ ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 6799999999999999999964 6789999999842 34567899999999997 9999999999987 5667999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC-CEEEeccccchhccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF-EAHVADFGLAKFLQD 846 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~ 846 (982)
|||+++++|.+++. .+++..+..++.|++.|++|||+.+ |+||||||+||+++.++ .+||+|||+++....
T Consensus 112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 99999999999985 4889999999999999999999998 99999999999999776 899999999986653
Q ss_pred cCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCC---------
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEV--------- 916 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 916 (982)
.. ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.......+....+.......
T Consensus 184 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 32 2345678999999999877 6689999999999999999999999965433322222211111100
Q ss_pred --CCCCcccccc-----eeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 917 --SQPSDAASVL-----AVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 917 --~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.......... ..++.... ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000 00000011 122334668999999999999999999999987
No 240
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.1e-37 Score=359.17 Aligned_cols=253 Identities=26% Similarity=0.347 Sum_probs=202.9
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC------------CchhhHHHHHHHHhcCCCCcccceE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG------------GNDHGFLAEIQTLGRIRHRNIVRLL 755 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~~ 755 (982)
.+.++|++.+.||+|+||+||+|.. .+++.||+|++...... ...+.+.+|+.++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 3457899999999999999999975 45889999998654321 3356788999999999999999999
Q ss_pred eEEEcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC---C
Q 002010 756 GYVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF---E 832 (982)
Q Consensus 756 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~---~ 832 (982)
+++.+....++||||+++|+|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++ .
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999999873 357999999999999999999999998 99999999999998775 6
Q ss_pred EEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHh
Q 002010 833 AHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 833 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 912 (982)
+||+|||++..+... .......||+.|+|||++. ..++.++||||+||++|+|++|.+||...... .....+...
T Consensus 188 ~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~ 262 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKKVEKG 262 (504)
T ss_dssp EEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC
T ss_pred EEEEECCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcC
Confidence 999999999876532 2334567999999999887 46999999999999999999999999865332 222222221
Q ss_pred ccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 913 TSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+ .....+..+.+++.+||+.||.+|||++|+++
T Consensus 263 ~~~~~~~----------------~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 263 KYYFDFN----------------DWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCCCCHH----------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCcc----------------ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1100000 00122357899999999999999999999986
No 241
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.8e-37 Score=338.31 Aligned_cols=261 Identities=27% Similarity=0.428 Sum_probs=198.6
Q ss_pred hhcccccccccccceEEEEEEe--CCCc--EEEEEEeccCC--CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM--PDGI--DVAIKRLVGRG--TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~--~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 765 (982)
++|+..+.||+|+||.||+|.+ .+++ .||+|++.... .....+.+.+|+.++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 5789999999999999999964 2333 68999885443 2234567889999999999999999999987654 89
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
+||||+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 999999999999999742 356899999999999999999999998 9999999999999999999999999998765
Q ss_pred ccCCc-ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCccc
Q 002010 846 DAGAS-ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAA 923 (982)
Q Consensus 846 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (982)
..... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~------- 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEGERL------- 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSCCCC-------
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHHHHccCCCC-------
Confidence 43221 12234567888999999998889999999999999999999 999997653322 222221111110
Q ss_pred ccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 924 SVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
..+...+..+.+++.+||+.||++|||++++++.|+++.+..
T Consensus 245 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 -----------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -----------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 112234457899999999999999999999999998776543
No 242
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.8e-37 Score=356.46 Aligned_cols=195 Identities=25% Similarity=0.354 Sum_probs=153.7
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcC-----Cc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR-----DT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 763 (982)
.++|+..+.||+|+||+||+|.. .+++.||||++...... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36799999999999999999965 46899999998543222 2345788999999999999999999998443 46
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.|+||||+ +++|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+|+.
T Consensus 132 ~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence 79999998 579999997 4467999999999999999999999998 99999999999999999999999999987
Q ss_pred ccccCC-------------------------ccccccccccccccccccc-ccCCCCcchhhHHHHHHHHHHHh
Q 002010 844 LQDAGA-------------------------SECMSSVAGSYGYIAPEYA-YTLKVDEKSDVYSFGVVLLELIA 891 (982)
Q Consensus 844 ~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt 891 (982)
...... .......+||+.|+|||++ .+..++.++||||+||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 643211 1223456789999999976 56679999999999999999999
No 243
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-36 Score=350.60 Aligned_cols=201 Identities=26% Similarity=0.343 Sum_probs=166.9
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcC-----Cc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR-----DT 763 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 763 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999965 56889999998543222 2345788999999999999999999998766 56
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.|+||||++ ++|.+++. ....+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999995 69999997 4467999999999999999999999998 99999999999999999999999999987
Q ss_pred ccccCCc--------------------cccccccccccccccccc-ccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 002010 844 LQDAGAS--------------------ECMSSVAGSYGYIAPEYA-YTLKVDEKSDVYSFGVVLLELIAGKKPVG 897 (982)
Q Consensus 844 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~ 897 (982)
....... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6533211 224567899999999986 56679999999999999999998655543
No 244
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4e-37 Score=371.68 Aligned_cols=249 Identities=23% Similarity=0.280 Sum_probs=206.4
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLL 766 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 766 (982)
.++|+..+.||+|+||.||+|+. .+++.||||++.... .......+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 46789999999999999999975 468889999985432 234456688899999988 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccc
Q 002010 767 LYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQD 846 (982)
Q Consensus 767 v~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 846 (982)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+|+....
T Consensus 420 V~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999973 357999999999999999999999998 99999999999999999999999999985432
Q ss_pred cCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 847 AGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 847 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. ........||+.|+|||++.+..|+.++||||+||++|||++|+.||......+....+. ....
T Consensus 495 ~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~-~~~~------------ 559 (674)
T 3pfq_A 495 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-EHNV------------ 559 (674)
T ss_dssp T--TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-SSCC------------
T ss_pred C--CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH-hCCC------------
Confidence 2 223456789999999999999999999999999999999999999997643322222221 1110
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTM-----REVVH 967 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~ell~ 967 (982)
.+|...+.++.+++.+||++||++||++ +||++
T Consensus 560 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1223344578999999999999999997 67764
No 245
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.6e-37 Score=343.50 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=206.5
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC-----CccE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR-----DTNL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 765 (982)
++|+..+.||+|+||.||+|.. .+++.||||++...........+.+|+.++++++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 5799999999999999999965 468899999986544444456788999999999999999999998765 3579
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 766 LLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
+||||++ ++|.+++.. ..+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 107 iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 9999996 599999863 46999999999999999999999998 9999999999999999999999999998765
Q ss_pred ccCC-ccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc-
Q 002010 846 DAGA-SECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA- 922 (982)
Q Consensus 846 ~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 922 (982)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........+..............
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 3321 122345689999999998654 4589999999999999999999999987655544444443322211000000
Q ss_pred -----cc-cceeecCC-C--CCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 -----AS-VLAVVDPR-L--SGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 -----~~-~~~~~~~~-~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.. ......+. . .......+..+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 00000000 0 0111233457899999999999999999999987
No 246
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.5e-37 Score=346.12 Aligned_cols=266 Identities=22% Similarity=0.262 Sum_probs=194.4
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcCC------
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRD------ 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 762 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46799999999999999999965 5689999999864332 223456889999999999999999999997655
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
..++||||++ ++|.+++. ..+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 6799999996 57888885 35899999999999999999999998 9999999999999999999999999998
Q ss_pred hccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC-----
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS----- 917 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 917 (982)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||............+.......+
T Consensus 176 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 176 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 65432 2234567899999999999999999999999999999999999999765433322222221111000
Q ss_pred -----------CCC-cccccceeecC-CCC---CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 -----------QPS-DAASVLAVVDP-RLS---GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 -----------~~~-~~~~~~~~~~~-~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.+. ........+.. ..+ ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000 00000000000 000 111223567899999999999999999999987
No 247
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-37 Score=338.59 Aligned_cols=252 Identities=26% Similarity=0.394 Sum_probs=198.2
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEc------C
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSN------R 761 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~ 761 (982)
..++|+..+.||+|+||.||+|.. .+++.||+|++... ......+.+|+.+++++ +||||+++++++.. .
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC--cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 356799999999999999999976 57899999998543 33456788999999999 79999999999876 4
Q ss_pred CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccc
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLA 841 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a 841 (982)
...++||||+++++|.+++.......+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 176 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 176 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence 57899999999999999998665678999999999999999999999998 999999999999999999999999999
Q ss_pred hhccccCCcccccccccccccccccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCC
Q 002010 842 KFLQDAGASECMSSVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEV 916 (982)
Q Consensus 842 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 916 (982)
...... ........|++.|+|||++. +..++.++||||+|+++|+|++|+.||............ .....
T Consensus 177 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~-- 251 (326)
T 2x7f_A 177 AQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-PRNPA-- 251 (326)
T ss_dssp C---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCC--
T ss_pred eecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh-hcCcc--
Confidence 866432 11233457899999999987 566899999999999999999999999764332222111 11110
Q ss_pred CCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 917 SQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
+ . ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 252 ~--------------~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 P--------------R--LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp C--------------C--CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c--------------c--CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0 011223457899999999999999999999987
No 248
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1e-36 Score=336.08 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=195.8
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCC--CCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIR--HRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|+..+.||+|+||.||+|...+++.||+|++..... ......+.+|+.++++++ ||||+++++++..++..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 56899999999999999999888899999999854432 233467889999999997 599999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
| +.+++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||++++ +.+||+|||++..+....
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 9 558899999974 357899999999999999999999998 999999999999964 899999999998765443
Q ss_pred Cccccccccccccccccccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 849 ASECMSSVAGSYGYIAPEYAYT-----------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
.........|++.|+|||++.+ ..++.++||||+|+++|||++|+.||...................
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-- 258 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 258 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC--
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccc--
Confidence 3333345678999999999875 468899999999999999999999997643322211111110000
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 259 ----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 259 ----------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ----------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----------------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0122223457899999999999999999999987
No 249
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.2e-38 Score=354.34 Aligned_cols=242 Identities=13% Similarity=0.109 Sum_probs=189.2
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCC--CCCchhhHHHHHH---HHhcCCCCcccceE-------eE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRG--TGGNDHGFLAEIQ---TLGRIRHRNIVRLL-------GY 757 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 757 (982)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+. ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999975 569999999986432 3334567889994 55555899999998 66
Q ss_pred EEcCCc-----------------cEEEEeccCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcE
Q 002010 758 VSNRDT-----------------NLLLYEYMPNGSLGEMLHGAK-----GGHLKWETRYRIALEAAKGLCYLHHDCSPLI 815 (982)
Q Consensus 758 ~~~~~~-----------------~~lv~e~~~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 815 (982)
+.+++. .++||||+ +|+|.+++.... ...+++..+..++.||+.||+|||+.+ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665532 78999999 689999997421 122335888899999999999999998 9
Q ss_pred EecCCCCCcEEEcCCCCEEEeccccchhccccCCcccccccccccccccccccccC-----------CCCcchhhHHHHH
Q 002010 816 IHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTL-----------KVDEKSDVYSFGV 884 (982)
Q Consensus 816 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~ 884 (982)
+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++||||+||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985331 2344567 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHH
Q 002010 885 VLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMRE 964 (982)
Q Consensus 885 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e 964 (982)
++|||++|+.||............ . + .....+..+.+++.+||+.||++|||++|
T Consensus 302 il~elltg~~Pf~~~~~~~~~~~~--------------------~-~----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGSEWI--------------------F-R----SCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CCSGGG--------------------G-S----SCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccchhhh--------------------h-h----hccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 999999999999653321110000 0 0 01122357889999999999999999999
Q ss_pred HHH
Q 002010 965 VVH 967 (982)
Q Consensus 965 ll~ 967 (982)
+++
T Consensus 357 ~l~ 359 (377)
T 3byv_A 357 AME 359 (377)
T ss_dssp HHT
T ss_pred Hhh
Confidence 986
No 250
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=338.37 Aligned_cols=260 Identities=24% Similarity=0.340 Sum_probs=200.8
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
.++|+..+.||+|+||.||+|...+ .||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3678999999999999999998743 59999885443 23344567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc--
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA-- 847 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 847 (982)
|+++++|.+++.. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++ ++.+||+|||++......
T Consensus 110 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 9999999999974 2357899999999999999999999998 99999999999998 679999999998765321
Q ss_pred -CCccccccccccccccccccccc---------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 848 -GASECMSSVAGSYGYIAPEYAYT---------LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 848 -~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
..........|++.|+|||++.+ ..++.++||||+|+++|||++|+.||........ ...+.......
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~- 262 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMGTGMKPN- 262 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHHHHTTCCCC-
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhccCCCCC-
Confidence 11222334568999999999864 4578999999999999999999999976433222 11111111100
Q ss_pred CCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCCCC
Q 002010 918 QPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSA 976 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~~~ 976 (982)
. .+...+..+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 263 ---------------~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 263 ---------------L--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp ---------------C--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ---------------C--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 0 00112236889999999999999999999999999987653
No 251
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.3e-37 Score=347.35 Aligned_cols=272 Identities=21% Similarity=0.233 Sum_probs=200.3
Q ss_pred HHHHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCc----------hhhHHHHHHHHhcCCCCcccceEeE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGN----------DHGFLAEIQTLGRIRHRNIVRLLGY 757 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~ 757 (982)
..+.++|+..+.||+|+||.||+|...+|+.||||++........ .+.+.+|+.++++++||||++++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 445678999999999999999999888899999999855433322 2678999999999999999999999
Q ss_pred EEcC-----CccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC
Q 002010 758 VSNR-----DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE 832 (982)
Q Consensus 758 ~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~ 832 (982)
+... ...++||||++ |+|.+++.. ....+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNND 172 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCC
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCC
Confidence 8543 35699999997 688888873 3457999999999999999999999998 999999999999999999
Q ss_pred EEEeccccchhccccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH
Q 002010 833 AHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRK 911 (982)
Q Consensus 833 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 911 (982)
+||+|||++...... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||............+..
T Consensus 173 ~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 249 (362)
T 3pg1_A 173 ITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249 (362)
T ss_dssp EEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred EEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 999999999754432 22345678999999999876 67899999999999999999999999875443333333332
Q ss_pred hccCCCCC---CcccccceeecCCC--------CCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 912 TTSEVSQP---SDAASVLAVVDPRL--------SGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 912 ~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
........ .........+.... .......+..+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 22110000 00000000000000 0112233456899999999999999999999987
No 252
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-36 Score=346.15 Aligned_cols=270 Identities=22% Similarity=0.269 Sum_probs=201.0
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc------cE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT------NL 765 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~ 765 (982)
.+|+..+.||+|+||.||+|+...+..||+|++...... ..+|+.+++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468999999999999999998877777999988543221 2379999999999999999999865433 78
Q ss_pred EEEeccCCCCHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc-CCCCEEEeccccchh
Q 002010 766 LLYEYMPNGSLGEMLH-GAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-SDFEAHVADFGLAKF 843 (982)
Q Consensus 766 lv~e~~~~~sL~~~l~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfG~a~~ 843 (982)
+||||++++.+..... ......+++..+..++.||++||+|||+.+ |+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999997654333322 123467999999999999999999999998 99999999999999 789999999999987
Q ss_pred ccccCCcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC--
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS-- 920 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 920 (982)
..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...........++...........
T Consensus 192 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 64332 23456789999999998765 5899999999999999999999999876544444444433222110000
Q ss_pred cccccceeecCCCC------CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCC
Q 002010 921 DAASVLAVVDPRLS------GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANP 972 (982)
Q Consensus 921 ~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~ 972 (982)
.........-+... .++...+..+.+++.+||+.||.+|||++|+++ .++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 00000000000111 122334568999999999999999999999987 34444
No 253
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.6e-37 Score=369.21 Aligned_cols=256 Identities=25% Similarity=0.376 Sum_probs=205.6
Q ss_pred hhcccccccccccceEEEEEEeC----CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP----DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
++|+..+.||+|+||.||+|... .+..||+|.+.........+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 57889999999999999999753 246799998855444444567899999999999999999999885 5678999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 469 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 9999999999999743 356899999999999999999999998 999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCcccccc
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVL 926 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (982)
. ........+++.|+|||++.+..++.++||||+|+++|||++ |..||...... +....+.....
T Consensus 545 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-~~~~~i~~~~~------------ 610 (656)
T 2j0j_A 545 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGER------------ 610 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHHTCC------------
T ss_pred c-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHcCCC------------
Confidence 2 222234456789999999998899999999999999999997 99999765332 22222222111
Q ss_pred eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 927 AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 927 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
...+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 611 -------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 611 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1123344567899999999999999999999999987653
No 254
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.1e-36 Score=329.66 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=205.1
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC--------CchhhHHHHHHHHhcCC-CCcccceEeEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG--------GNDHGFLAEIQTLGRIR-HRNIVRLLGYV 758 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 758 (982)
.+.++|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3457899999999999999999976 46899999998544321 11345788999999995 99999999999
Q ss_pred EcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEecc
Q 002010 759 SNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADF 838 (982)
Q Consensus 759 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 838 (982)
..+...++||||+++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999999973 357999999999999999999999998 999999999999999999999999
Q ss_pred ccchhccccCCcccccccccccccccccccc------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHh
Q 002010 839 GLAKFLQDAGASECMSSVAGSYGYIAPEYAY------TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 839 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 912 (982)
|.+...... .......+++.|+|||++. ...++.++||||+|+++|||++|+.||....... ....+...
T Consensus 169 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~ 244 (298)
T 1phk_A 169 GFSCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSG 244 (298)
T ss_dssp TTCEECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT
T ss_pred cchhhcCCC---cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHHHhcC
Confidence 999876532 2234567899999999875 4568899999999999999999999997643322 22222221
Q ss_pred ccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 913 TSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...... ......+..+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQFGS----------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCCCCT----------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcccCc----------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111000 011234457899999999999999999999986
No 255
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-36 Score=350.85 Aligned_cols=261 Identities=18% Similarity=0.276 Sum_probs=205.7
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCC-CcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRH-RNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+|+++++.++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC---SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc---ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 36799999999999999999975 569999999874432 23457899999999987 55666666667788889999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---cCCCCEEEeccccchhcc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL---DSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~ 845 (982)
||+ +++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.+.
T Consensus 83 e~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 99999999742 457999999999999999999999998 9999999999999 588999999999998766
Q ss_pred ccCCc-----ccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 846 DAGAS-----ECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 846 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~---- 233 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV---- 233 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH----
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc----
Confidence 43221 122356799999999999999999999999999999999999999987554332222111111000
Q ss_pred cccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCC
Q 002010 921 DAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANP 972 (982)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~ 972 (982)
.......+...+.++.+++.+||+.||++||++++|++.|+.+
T Consensus 234 ---------~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 234 ---------ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp ---------HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ---------cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0000001112345789999999999999999999999988664
No 256
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.8e-36 Score=326.97 Aligned_cols=255 Identities=25% Similarity=0.338 Sum_probs=206.4
Q ss_pred HHHHHhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc
Q 002010 687 AEDVLESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN 764 (982)
Q Consensus 687 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 764 (982)
...+.++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++++++||||+++++++.+....
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 4556789999999999999999999764 68999999985443 334567789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC---CCEEEeccccc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD---FEAHVADFGLA 841 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a 841 (982)
++||||+++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++.+ +.+||+|||++
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999999998863 357899999999999999999999998 9999999999999764 47999999999
Q ss_pred hhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc
Q 002010 842 KFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD 921 (982)
Q Consensus 842 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (982)
....... ......+++.|+|||++.+ .++.++||||+|+++|+|++|..||...... .....+.........+
T Consensus 172 ~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~-- 244 (287)
T 2wei_A 172 TCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLP-- 244 (287)
T ss_dssp GTBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSG--
T ss_pred eeecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCch--
Confidence 8765321 2234568899999998876 4899999999999999999999999764332 2222222211100000
Q ss_pred ccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 922 AASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 245 --------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 245 --------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp --------------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00123357889999999999999999999987
No 257
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.1e-37 Score=347.96 Aligned_cols=265 Identities=21% Similarity=0.300 Sum_probs=186.7
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC-CCchhhHHHHHHHHhcCCCCcccceEeEEEcC------C
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT-GGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR------D 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 762 (982)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... ......+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999964 5689999999854322 22345788999999999999999999998654 5
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
..++|||++ +++|.+++.. ..+++..+..++.||++|++|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 579999999 7899998853 57999999999999999999999998 9999999999999999999999999998
Q ss_pred hccccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC---
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ--- 918 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 918 (982)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........+..........
T Consensus 181 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 181 HTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 65422 345678999999999877 678999999999999999999999998654433333333322221000
Q ss_pred CCcccccceeec--CCCC-----CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 919 PSDAASVLAVVD--PRLS-----GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 919 ~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..........+. +..+ ......+..+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000000000 0000 111223456889999999999999999999987
No 258
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-36 Score=341.50 Aligned_cols=275 Identities=21% Similarity=0.272 Sum_probs=206.1
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC-----Ccc
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR-----DTN 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 764 (982)
.++|+..+.||+|+||.||+|.. .+|+.||||++...........+.+|+.++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46799999999999999999976 468999999985443333455788999999999999999999987654 567
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
++||||++ ++|.+++.. ..+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 699999864 46999999999999999999999998 999999999999999999999999999876
Q ss_pred cccCCc--------cccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccC
Q 002010 845 QDAGAS--------ECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSE 915 (982)
Q Consensus 845 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 915 (982)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...................
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 532111 11234578999999998764 678999999999999999999999998754333333333222221
Q ss_pred CCCCCcccc-----cceeec--CCCC-----CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCC
Q 002010 916 VSQPSDAAS-----VLAVVD--PRLS-----GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPP 973 (982)
Q Consensus 916 ~~~~~~~~~-----~~~~~~--~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~ 973 (982)
. ....... ....+. +..+ ......+..+.+++.+||+.||++|||++|+++ .+....
T Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 243 H-SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp C-STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred c-hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 1 0000000 000000 0000 111234567889999999999999999999997 454443
No 259
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.1e-36 Score=337.49 Aligned_cols=265 Identities=20% Similarity=0.283 Sum_probs=205.9
Q ss_pred HhhcccccccccccceEEEEEEe--CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCc------ccceEeEEEcCC
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM--PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRN------IVRLLGYVSNRD 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~ 762 (982)
.++|++.+.||+|+||.||+|.. .+++.||+|++... ......+.+|+.+++.++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 35799999999999999999965 46889999998432 233456788999999887654 999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC-------------
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS------------- 829 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~------------- 829 (982)
..++||||+ +++|.+++.......+++..+..++.||+.|++|||+.+ |+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 899999998666668999999999999999999999998 999999999999987
Q ss_pred ------CCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc
Q 002010 830 ------DFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV 903 (982)
Q Consensus 830 ------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 903 (982)
++.+||+|||.+...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 678999999999764322 234678999999999999999999999999999999999999998654333
Q ss_pred hHHHHHHHhccCCCCCC-c---ccc------------------cceeecC--CCCCCChHhHHHHHHHHhhccCCCCCCC
Q 002010 904 DIVRWVRKTTSEVSQPS-D---AAS------------------VLAVVDP--RLSGYPLTGVIHLFKVAMMCVEDESSAR 959 (982)
Q Consensus 904 ~~~~~~~~~~~~~~~~~-~---~~~------------------~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~R 959 (982)
.... +.......+... . ... ......+ .....+...+..+.+++.+||+.||++|
T Consensus 242 ~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 242 HLAM-MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHH-HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHH-HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 2222 222211110000 0 000 0000000 0012234556789999999999999999
Q ss_pred CCHHHHHH
Q 002010 960 PTMREVVH 967 (982)
Q Consensus 960 pt~~ell~ 967 (982)
||++|+++
T Consensus 321 pt~~ell~ 328 (339)
T 1z57_A 321 ITLREALK 328 (339)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999985
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.3e-36 Score=346.33 Aligned_cols=264 Identities=25% Similarity=0.285 Sum_probs=197.7
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcC------Ccc
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNR------DTN 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 764 (982)
.+|+..+.||+|+||.||+|.. .+++.||||++.... ....+|++++++++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 3688899999999999999976 468999999985432 2234799999999999999999988542 135
Q ss_pred EEEEeccCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC-CCEEEeccccc
Q 002010 765 LLLYEYMPNGSLGEMLHG--AKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD-FEAHVADFGLA 841 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfG~a 841 (982)
++||||+++ ++.+.+.. .....+++..+..++.||++||+|||+.+ |+||||||+||+++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhh
Confidence 789999975 66666542 23467999999999999999999999988 9999999999999965 57899999999
Q ss_pred hhccccCCcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCC
Q 002010 842 KFLQDAGASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPS 920 (982)
Q Consensus 842 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (982)
+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||........+..++...........
T Consensus 205 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 205 KQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp EECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 8764322 23456789999999998765 7999999999999999999999999875544444444443222100000
Q ss_pred --cccccceeecCCCCC------CChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 921 --DAASVLAVVDPRLSG------YPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 921 --~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.........-+.... ++...+..+.+|+.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000000000011111 22334567899999999999999999999986
No 261
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=347.50 Aligned_cols=268 Identities=19% Similarity=0.276 Sum_probs=185.3
Q ss_pred Hhhccc-ccccccccceEEEEEEeC---CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEc--CCcc
Q 002010 691 LESLKD-ENIIGKGGAGIVYRGSMP---DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN--RDTN 764 (982)
Q Consensus 691 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 764 (982)
.+.|+. ++.||+|+||.||+|+.. +++.||+|++... .....+.+|+.++++++||||+++++++.. +...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS---SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC---CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 355665 568999999999999754 5789999998432 234568899999999999999999999854 6678
Q ss_pred EEEEeccCCCCHHHHhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE----cCCCCE
Q 002010 765 LLLYEYMPNGSLGEMLHGA-------KGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL----DSDFEA 833 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill----~~~~~~ 833 (982)
++||||++ ++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcE
Confidence 99999996 5888877521 2235999999999999999999999998 9999999999999 677999
Q ss_pred EEeccccchhccccC-CcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCC---------
Q 002010 834 HVADFGLAKFLQDAG-ASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDG--------- 902 (982)
Q Consensus 834 kl~DfG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~--------- 902 (982)
||+|||+|+.+.... .........||+.|+|||++.+. .++.++||||+||++|||++|++||......
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 999999998765321 11233456789999999998874 5899999999999999999999999754331
Q ss_pred chHHHHHHHhccCCCCCCcccccce----------eecCCCCCC---------ChHhHHHHHHHHhhccCCCCCCCCCHH
Q 002010 903 VDIVRWVRKTTSEVSQPSDAASVLA----------VVDPRLSGY---------PLTGVIHLFKVAMMCVEDESSARPTMR 963 (982)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~Rpt~~ 963 (982)
..+..++..... +...... .... ......... .......+.+|+.+||+.||.+|||++
T Consensus 252 ~~l~~i~~~~g~-p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 252 DQLDRIFNVMGF-PADKDWE-DIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp HHHHHHHHHHCC-CCTTTCG-GGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHHHHhhCC-CChhhcc-hhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 222222222221 1111100 0000 000000000 011134678999999999999999999
Q ss_pred HHHH
Q 002010 964 EVVH 967 (982)
Q Consensus 964 ell~ 967 (982)
|+++
T Consensus 330 e~L~ 333 (405)
T 3rgf_A 330 QAMQ 333 (405)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9998
No 262
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.5e-36 Score=344.98 Aligned_cols=266 Identities=19% Similarity=0.201 Sum_probs=203.6
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC--------CCcccceEeEEE--
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR--------HRNIVRLLGYVS-- 759 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~-- 759 (982)
.++|++.+.||+|+||+||+|.. .+++.||||++... ......+.+|+.++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 36799999999999999999965 56889999998432 233457889999999985 788999999987
Q ss_pred --cCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEcCCC-----
Q 002010 760 --NRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLDSDF----- 831 (982)
Q Consensus 760 --~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~~~~----- 831 (982)
.....++||||+ ++++.+++.......+++..+..++.||+.||+|||++ + |+||||||+||+++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhh
Confidence 556789999999 66777777655557899999999999999999999998 8 99999999999998775
Q ss_pred --------------------------------------------CEEEeccccchhccccCCcccccccccccccccccc
Q 002010 832 --------------------------------------------EAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEY 867 (982)
Q Consensus 832 --------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~ 867 (982)
.+||+|||.+...... .....||+.|+|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence 7999999999866432 344578999999999
Q ss_pred cccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc-----hHHHHHHHhccCCCC------------CCcccccceeec
Q 002010 868 AYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV-----DIVRWVRKTTSEVSQ------------PSDAASVLAVVD 930 (982)
Q Consensus 868 ~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 930 (982)
+.+..++.++||||+||++|||++|+.||....... .....+.......+. ...........+
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997644321 111111111111000 000000000000
Q ss_pred C----------CCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 931 P----------RLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 931 ~----------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. .....+...+..+.+++.+||+.||++|||++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 001235667778999999999999999999999985
No 263
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.3e-36 Score=341.77 Aligned_cols=336 Identities=20% Similarity=0.203 Sum_probs=266.2
Q ss_pred CCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 239 ALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 239 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
.++++++|++++|.++...+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46889999999999987666678999999999999999998777889999999999999999998888888999999999
Q ss_pred hhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccccccc
Q 002010 319 QLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFI 398 (982)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~ 398 (982)
++++|+++...+..|..+++|++|++++|.+++..+..+..+++|++|++++|++++. .+..+++|+.|++++|.+.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999866666678889999999999988877777888888888888888888743 2344455555555555543
Q ss_pred ccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccC
Q 002010 399 GPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGN 478 (982)
Q Consensus 399 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~ 478 (982)
+ +...++|++|++++|++ ....... ..+|+.|++++|++++. ..+..
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l------------------------~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSI------------------------NVVRGPV--NVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp E-----EECCSSCSEEECCSSCC------------------------CEEECCC--CSSCCEEECCSSCCCCC--GGGGG
T ss_pred c-----cCCCCcceEEECCCCee------------------------eeccccc--cccccEEECCCCCCccc--HHHcC
Confidence 2 12223445555555544 4332211 25788888888888854 57888
Q ss_pred CCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEE
Q 002010 479 LPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILN 558 (982)
Q Consensus 479 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 558 (982)
+++|++|++++|++++..|..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 9999999999999998888889999999999999999984 5667788999999999999998 6788899999999999
Q ss_pred cccccccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 559 LSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 559 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
|++|+|++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|..+
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 999999854 3 77889999999999999875322 234556666778888888754
No 264
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.7e-36 Score=330.96 Aligned_cols=253 Identities=25% Similarity=0.408 Sum_probs=193.9
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEc--------
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN-------- 760 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 760 (982)
+.++|+..+.||+|+||.||+|.. .+++.||+|++... ......+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 457899999999999999999975 57899999998432 2334678899999999999999999998765
Q ss_pred -----CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEE
Q 002010 761 -----RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHV 835 (982)
Q Consensus 761 -----~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 835 (982)
....++||||+++++|.+++.. ....+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEE
Confidence 3567899999999999999974 3356788999999999999999999998 999999999999999999999
Q ss_pred eccccchhccccC------------CcccccccccccccccccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCC
Q 002010 836 ADFGLAKFLQDAG------------ASECMSSVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELIAGKKPVGEFGDG 902 (982)
Q Consensus 836 ~DfG~a~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~ 902 (982)
+|||++....... .........|++.|+|||++.+. .++.++||||+|+++|||++ ||....+.
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~ 234 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH
Confidence 9999998654221 01223445789999999998864 68999999999999999998 55432111
Q ss_pred chHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 903 VDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+..... . ..+..+...+..+.+++.+||+.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILKKLRSVSI--E--------------FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHSTTC--C--------------CCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcccccc--c--------------cCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111221111110 0 001233445567899999999999999999999987
No 265
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.5e-36 Score=342.35 Aligned_cols=267 Identities=21% Similarity=0.246 Sum_probs=203.9
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CC-----cccceEeEEEcCC
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HR-----NIVRLLGYVSNRD 762 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~ 762 (982)
+.++|+..+.||+|+||+||+|.. .+++.||||++... ......+.+|+.+++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 457899999999999999999965 46889999998432 223455677888888774 44 5999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh--cCCCcEEecCCCCCcEEEc--CCCCEEEecc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHH--DCSPLIIHRDVKSNNILLD--SDFEAHVADF 838 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~~~~ivHrDlkp~Nill~--~~~~~kl~Df 838 (982)
..++||||++ ++|.+++.......+++..+..++.|++.|++|||. .+ |+||||||+||+++ .++.+||+||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCC
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999995 599999987666779999999999999999999994 45 99999999999995 4788999999
Q ss_pred ccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC
Q 002010 839 GLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ 918 (982)
Q Consensus 839 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 918 (982)
|+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...........++......+..
T Consensus 206 G~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 280 (382)
T 2vx3_A 206 GSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280 (382)
T ss_dssp TTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred cCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999866422 345678999999999999999999999999999999999999998754444443333332211100
Q ss_pred -----C----------Ccccccceeec-------CC---------------------CCCCChHhHHHHHHHHhhccCCC
Q 002010 919 -----P----------SDAASVLAVVD-------PR---------------------LSGYPLTGVIHLFKVAMMCVEDE 955 (982)
Q Consensus 919 -----~----------~~~~~~~~~~~-------~~---------------------~~~~~~~~~~~l~~li~~cl~~d 955 (982)
+ ..........+ +. ...........+.+|+.+||+.|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 360 (382)
T 2vx3_A 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYD 360 (382)
T ss_dssp HHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCC
Confidence 0 00000000000 00 00112234457899999999999
Q ss_pred CCCCCCHHHHHH
Q 002010 956 SSARPTMREVVH 967 (982)
Q Consensus 956 P~~Rpt~~ell~ 967 (982)
|++|||++|+++
T Consensus 361 P~~Rpta~e~L~ 372 (382)
T 2vx3_A 361 PKTRIQPYYALQ 372 (382)
T ss_dssp TTTSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999986
No 266
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.1e-36 Score=337.52 Aligned_cols=272 Identities=21% Similarity=0.267 Sum_probs=195.2
Q ss_pred HHHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc--
Q 002010 687 AEDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT-- 763 (982)
Q Consensus 687 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 763 (982)
.....++|+..+.||+|+||.||+|.. .+++.||||++... ......+.+|+..+..++||||+++++++.....
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD--PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC--TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC--ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 445678899999999999999999976 46899999988543 2334456788888899999999999999865433
Q ss_pred -----cEEEEeccCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCcEEecCCCCCcEEEcC-CCCE
Q 002010 764 -----NLLLYEYMPNGSLGEMLHG--AKGGHLKWETRYRIALEAAKGLCYLH--HDCSPLIIHRDVKSNNILLDS-DFEA 833 (982)
Q Consensus 764 -----~~lv~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivHrDlkp~Nill~~-~~~~ 833 (982)
.++||||+++ ++.+.+.. .....+++..+..++.|++.|++||| +.+ |+||||||+||+++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcE
Confidence 7899999976 55444332 34567899999999999999999999 887 999999999999997 8999
Q ss_pred EEeccccchhccccCCcccccccccccccccccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHh
Q 002010 834 HVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 834 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 912 (982)
||+|||+++.+.... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...........++...
T Consensus 172 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp EECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred EEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 999999998765332 234567899999999987654 8999999999999999999999998765544444444332
Q ss_pred ccCCCC------CCc-ccccc----eeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 913 TSEVSQ------PSD-AASVL----AVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 913 ~~~~~~------~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...... +.. ..... ..+...+...+...+..+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 221100 000 00000 00001111233345678999999999999999999999987
No 267
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.1e-36 Score=341.46 Aligned_cols=264 Identities=20% Similarity=0.278 Sum_probs=200.4
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcCCcc----
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTN---- 764 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 764 (982)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 36789999999999999999965 56899999998543322 2245788999999999999999999999877655
Q ss_pred --EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 765 --LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 765 --~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
++||||++ ++|.+++. ..+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 68888874 35999999999999999999999998 9999999999999999999999999998
Q ss_pred hccccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC---
Q 002010 843 FLQDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ--- 918 (982)
Q Consensus 843 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 918 (982)
..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......................
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 65432 344678999999999887 679999999999999999999999998754444433333322221000
Q ss_pred CCccccc----ceeec---CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 919 PSDAASV----LAVVD---PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 919 ~~~~~~~----~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
....... ..... ..+.......+..+.+++.+||+.||++|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000000 00000 0000112234567899999999999999999999987
No 268
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.5e-36 Score=342.86 Aligned_cols=253 Identities=12% Similarity=0.055 Sum_probs=179.6
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC--CchhhHHHHHHHHhcC--CCCcccceE-------eEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG--GNDHGFLAEIQTLGRI--RHRNIVRLL-------GYVS 759 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~ 759 (982)
..|+..+.||+|+||.||+|.. .+++.||||++...... .....+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4588999999999999999975 47899999999654322 2334566775444444 699988755 4444
Q ss_pred cC-----------------CccEEEEeccCCCCHHHHhhcCCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCCcEE
Q 002010 760 NR-----------------DTNLLLYEYMPNGSLGEMLHGAKGGHLKWETR------YRIALEAAKGLCYLHHDCSPLII 816 (982)
Q Consensus 760 ~~-----------------~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~iv 816 (982)
.+ ...++||||++ ++|.+++... ...+.+..+ ..++.||+.||+|||+++ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 33 23799999998 8999999743 223444555 677899999999999998 99
Q ss_pred ecCCCCCcEEEcCCCCEEEeccccchhccccCCccccccccccccccccccccc--CCCCcchhhHHHHHHHHHHHhCCC
Q 002010 817 HRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELIAGKK 894 (982)
Q Consensus 817 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~ 894 (982)
||||||+||+++.++.+||+|||+|+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999865421 124556799999999987 679999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 895 PVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 895 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
||......... ... ............. ......+..+.+++.+||+.||++|||++|+++
T Consensus 292 Pf~~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG------SWK-------RPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT------CCC-------BCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc------chh-------hhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99764322100 000 0000000000110 112244568999999999999999999999875
No 269
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.8e-36 Score=334.65 Aligned_cols=253 Identities=27% Similarity=0.387 Sum_probs=180.1
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHH-HHhcCCCCcccceEeEEEcCCccEEEEe
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQ-TLGRIRHRNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e 769 (982)
++|+..+.||+|+||.||+|.. .+++.||||++...........+..|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 5788899999999999999976 4689999999965544344455666666 6777899999999999999999999999
Q ss_pred ccCCCCHHHHhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEcCCCCEEEeccccchhcc
Q 002010 770 YMPNGSLGEMLHG---AKGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQ 845 (982)
Q Consensus 770 ~~~~~sL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 845 (982)
|+++ +|.+++.. .....+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9975 88877752 2356799999999999999999999998 8 9999999999999999999999999998665
Q ss_pred ccCCccccccccccccccccccc----ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCc
Q 002010 846 DAGASECMSSVAGSYGYIAPEYA----YTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSD 921 (982)
Q Consensus 846 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (982)
... ......||+.|+|||++ .+..++.++||||+|+++|||++|+.||........ .......
T Consensus 178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~------- 244 (327)
T 3aln_A 178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---QLTQVVK------- 244 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCCC-------
T ss_pred ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---HHHHHhc-------
Confidence 321 22334789999999998 456789999999999999999999999976432111 1100000
Q ss_pred ccccceeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 922 AASVLAVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 922 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+.+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 245 ------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 ------GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp ------SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0001111 112234567899999999999999999999976
No 270
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=335.92 Aligned_cols=263 Identities=20% Similarity=0.279 Sum_probs=200.6
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-CchhhHHHHHHHHhcCCCCcccceEeEEEcCCc------
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-GNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT------ 763 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 763 (982)
++|+..+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5789999999999999999965 56899999998543322 224568899999999999999999999987654
Q ss_pred cEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 764 NLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 764 ~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
.++||||++ ++|.+++. ..+++..+..++.||+.|++|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 68888774 35899999999999999999999998 99999999999999999999999999986
Q ss_pred ccccCCccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC---C
Q 002010 844 LQDAGASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ---P 919 (982)
Q Consensus 844 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~ 919 (982)
.... .....+|+.|+|||++.+ ..++.++||||+|+++|||++|+.||...................... .
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 5422 234578999999999876 678999999999999999999999998754333333333222111000 0
Q ss_pred Ccc-------cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 920 SDA-------ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 920 ~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
... ........+.+.......+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 000000111222333455678999999999999999999999986
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6.2e-36 Score=332.65 Aligned_cols=251 Identities=21% Similarity=0.244 Sum_probs=173.9
Q ss_pred HHhhcccc-cccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHH-HHHhcCCCCcccceEeEEEc----CC
Q 002010 690 VLESLKDE-NIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEI-QTLGRIRHRNIVRLLGYVSN----RD 762 (982)
Q Consensus 690 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~----~~ 762 (982)
+.++|++. +.||+|+||.||+|... +++.||+|++... . ...+|+ ..++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~-~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----P-KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----H-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----H-HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 45778884 46999999999999764 6999999998432 2 223333 33566799999999999876 44
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---CCCEEEeccc
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---DFEAHVADFG 839 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfG 839 (982)
..++||||+++|+|.+++.......+++.+++.++.|++.|++|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccc
Confidence 5799999999999999998666668999999999999999999999998 999999999999976 4569999999
Q ss_pred cchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQP 919 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 919 (982)
++...... ......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...................
T Consensus 177 ~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---- 248 (336)
T 3fhr_A 177 FAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG---- 248 (336)
T ss_dssp TCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc----
Confidence 99765432 2334678999999999988889999999999999999999999997643322111110000000
Q ss_pred CcccccceeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 920 SDAASVLAVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 920 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
....+ ......+..+.+++.+||+.||++|||++|+++
T Consensus 249 ----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 ----------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 111234557899999999999999999999998
No 272
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=338.46 Aligned_cols=256 Identities=25% Similarity=0.341 Sum_probs=184.6
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCcccceEeEEE--------cC
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVS--------NR 761 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~ 761 (982)
.+|+..+.||+|+||.||+|.. .+++.||+|++... .......+.+|+.++.++. ||||+++++++. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 4688999999999999999975 47899999988443 3334567889999999996 999999999984 23
Q ss_pred CccEEEEeccCCCCHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEecccc
Q 002010 762 DTNLLLYEYMPNGSLGEMLHG-AKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGL 840 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~ 840 (982)
...++||||++ |+|.+++.. .....+++..++.++.||+.|++|||+.+ ++|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence 34789999995 799998864 23457999999999999999999999764 3499999999999999999999999999
Q ss_pred chhccccCCcc----------ccccccccccccccccc---ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHH
Q 002010 841 AKFLQDAGASE----------CMSSVAGSYGYIAPEYA---YTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVR 907 (982)
Q Consensus 841 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 907 (982)
+.......... ......||+.|+|||++ .+..++.++||||+|+++|||++|+.||...... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~ 260 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----R 260 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----H
Confidence 98765332111 11245689999999998 5667899999999999999999999999753221 1
Q ss_pred HHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCC
Q 002010 908 WVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPP 973 (982)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~ 973 (982)
........ ..+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 261 ~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 261 IVNGKYSI-------------------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp -----CCC-------------------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcCcccC-------------------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111110 001111234789999999999999999999999987654
No 273
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.8e-36 Score=358.97 Aligned_cols=336 Identities=20% Similarity=0.194 Sum_probs=274.1
Q ss_pred CCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 239 ALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 239 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
.+++++.|++++|.++...+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 36789999999999997777778999999999999999998888899999999999999999998888888999999999
Q ss_pred hhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccccccc
Q 002010 319 QLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFI 398 (982)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~ 398 (982)
+|++|.+++..+..|+.+++|++|++++|.+++..|..++.+++|++|++++|.+++.. +..+++|+.|++++|.+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999777777889999999999999998888888888888888888888887532 334455555555555544
Q ss_pred ccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccC
Q 002010 399 GPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGN 478 (982)
Q Consensus 399 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~ 478 (982)
+ +....+|+.|++++|.+ ....+.. ..+|+.|+|++|++++ +..++.
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l------------------------~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSI------------------------NVVRGPV--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp E-----EECCTTCSEEECCSSCC------------------------CEEECSC--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c-----ccCCchhheeeccCCcc------------------------ccccccc--CCCCCEEECCCCCCCC--Chhhcc
Confidence 2 22233455555555544 4332221 1468888888888886 367889
Q ss_pred CCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEE
Q 002010 479 LPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILN 558 (982)
Q Consensus 479 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 558 (982)
+++|+.|+|++|++++..|..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 9999999999999998889999999999999999999995 6777788999999999999998 6888899999999999
Q ss_pred cccccccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 559 LSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 559 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
|++|+|++. | +..+++|+.|+|++|++++..+. ..+..+....+.+++..|+.+
T Consensus 331 L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 331 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 999999854 3 77889999999999999986432 235666677788999999864
No 274
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=330.51 Aligned_cols=273 Identities=21% Similarity=0.293 Sum_probs=197.4
Q ss_pred HhhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEE----------
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVS---------- 759 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~---------- 759 (982)
.++|+..+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 367899999999999999999764 4899999988533 3334567889999999999999999999874
Q ss_pred ----cCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc-CCCCEE
Q 002010 760 ----NRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-SDFEAH 834 (982)
Q Consensus 760 ----~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-~~~~~k 834 (982)
+....++||||++ |+|.+++. ..++++..+..++.|++.|++|||+.+ |+||||||+||+++ +++.+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence 3456799999997 69999985 357899999999999999999999998 99999999999997 567999
Q ss_pred EeccccchhccccC-Cccccccccccccccccccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHh
Q 002010 835 VADFGLAKFLQDAG-ASECMSSVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKT 912 (982)
Q Consensus 835 l~DfG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 912 (982)
|+|||+++...... .........++..|+|||++.+ ..++.++||||+|+++|||++|+.||................
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 241 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 99999998764321 1122334567889999998865 678999999999999999999999998654333322222221
Q ss_pred ccCCCCCCccccc--------ce-eecCCC--CCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH--HhcCCC
Q 002010 913 TSEVSQPSDAASV--------LA-VVDPRL--SGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH--MLANPP 973 (982)
Q Consensus 913 ~~~~~~~~~~~~~--------~~-~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~--~L~~~~ 973 (982)
.. ... ...... .. ...+.. .......+..+.+++.+||+.||++|||++|+++ .+....
T Consensus 242 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 242 PV-VHE-EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313 (320)
T ss_dssp CC-CCH-HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred CC-Cch-hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence 11 000 000000 00 000000 0112234567899999999999999999999987 454433
No 275
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.7e-35 Score=330.84 Aligned_cols=266 Identities=21% Similarity=0.255 Sum_probs=203.0
Q ss_pred HhhcccccccccccceEEEEEEeC-CC-cEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCc------ccceEeEEEcCC
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMP-DG-IDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRN------IVRLLGYVSNRD 762 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~ 762 (982)
.++|++.+.||+|+||.||+|... ++ +.||+|++... ......+.+|+.++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 367999999999999999999753 34 68999998432 233456788999999997766 999999999999
Q ss_pred ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEE---------------
Q 002010 763 TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILL--------------- 827 (982)
Q Consensus 763 ~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill--------------- 827 (982)
..++||||+ ++++.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence 999999999 677888887655568999999999999999999999988 9999999999999
Q ss_pred ----cCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCc
Q 002010 828 ----DSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGV 903 (982)
Q Consensus 828 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 903 (982)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56789999999999764322 234678999999999999999999999999999999999999998654333
Q ss_pred hHHHHHHHhccCCCCCCc---ccc------------------cceeecC--CCCCCChHhHHHHHHHHhhccCCCCCCCC
Q 002010 904 DIVRWVRKTTSEVSQPSD---AAS------------------VLAVVDP--RLSGYPLTGVIHLFKVAMMCVEDESSARP 960 (982)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~---~~~------------------~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 960 (982)
............+..... ... ......+ .........+..+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 222222221111000000 000 0000000 00012234456789999999999999999
Q ss_pred CHHHHHH
Q 002010 961 TMREVVH 967 (982)
Q Consensus 961 t~~ell~ 967 (982)
|++|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999985
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-35 Score=335.26 Aligned_cols=265 Identities=17% Similarity=0.214 Sum_probs=202.0
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-----------CCcccceEeEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-----------HRNIVRLLGYVS 759 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 759 (982)
++|+..+.||+|+||.||+|.. .+++.||||++.. .......+.+|+.++++++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 5789999999999999999975 5789999999842 2223456788999998886 899999999987
Q ss_pred cCC----ccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEc------
Q 002010 760 NRD----TNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLD------ 828 (982)
Q Consensus 760 ~~~----~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~------ 828 (982)
..+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||++ + |+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 654 679999999 89999999876667799999999999999999999997 8 99999999999994
Q ss_pred CCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC------
Q 002010 829 SDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDG------ 902 (982)
Q Consensus 829 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~------ 902 (982)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999866432 23457899999999999999999999999999999999999999764321
Q ss_pred chHHHHHHHhccCCCCC-----------Ccccccceeec----------CCCCCCChHhHHHHHHHHhhccCCCCCCCCC
Q 002010 903 VDIVRWVRKTTSEVSQP-----------SDAASVLAVVD----------PRLSGYPLTGVIHLFKVAMMCVEDESSARPT 961 (982)
Q Consensus 903 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt 961 (982)
.............+... ........+.. ......+...+..+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 11222222111100000 00000000000 0011345677888999999999999999999
Q ss_pred HHHHHH
Q 002010 962 MREVVH 967 (982)
Q Consensus 962 ~~ell~ 967 (982)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999998
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-35 Score=327.17 Aligned_cols=260 Identities=29% Similarity=0.493 Sum_probs=207.0
Q ss_pred CCccEEEccCCCccc--ccCccccCCCcccEEEecc-ccccccCCccccCccccceeecccccccccCCccccCCCCCCE
Q 002010 337 PNLEVLQVWGNNFTF--ELPENLGRNGKLLILDVTS-NHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTK 413 (982)
Q Consensus 337 ~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~ 413 (982)
.+++.|++++|.+++ .+|..+..+++|++|++++ |.+.+.+|..+.++++|++|++++|.+.+.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356666666666666 5666666666666666663 6666666666666666666666666666666666666666666
Q ss_pred EEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCC-Ccceeeeccccc
Q 002010 414 IRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLP-SLNILSLQNNRL 492 (982)
Q Consensus 414 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~-~L~~L~L~~N~l 492 (982)
|++++|++++.+|..+..++ +|++|++++|++++.+|..++.++ +|++|++++|++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~-----------------------~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLP-----------------------NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp EECCSSEEESCCCGGGGGCT-----------------------TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred EeCCCCccCCcCChHHhcCC-----------------------CCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 66666666655555555554 556666666666667778888887 899999999999
Q ss_pred cCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCcccc
Q 002010 493 EGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEM 572 (982)
Q Consensus 493 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 572 (982)
++.+|..+..++ |++|++++|++++.+|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|++|+|++.+|..+
T Consensus 187 ~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 888888888887 99999999999988999999999999999999999877666 8899999999999999999999999
Q ss_pred ccccccceecccCCccccCCCCCccccccccccccCCcCcccCCCCCCc
Q 002010 573 RNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLRNGTCQ 621 (982)
Q Consensus 573 ~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~~~~c~ 621 (982)
..+++|++|+|++|+++|.+|...++.++....+.|||++||.|.+.|.
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C~ 313 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSSCCC
T ss_pred hcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCCCCC
Confidence 9999999999999999999999888999999999999999999888883
No 278
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=327.44 Aligned_cols=252 Identities=23% Similarity=0.354 Sum_probs=182.5
Q ss_pred HhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhh-HHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 691 LESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHG-FLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
.++|+..+.||+|+||.||+|.. .+++.||||++..........+ +.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 46789999999999999999976 4689999999865443333333 344445677889999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHD-CSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
||+ ++.+..+.. .....+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 555655554 2346799999999999999999999985 8 999999999999999999999999999766532
Q ss_pred CCcccccccccccccccccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcc
Q 002010 848 GASECMSSVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDA 922 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (982)
. ......+++.|+|||++. ...++.++||||+|+++|||++|+.||............+.......
T Consensus 179 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------ 249 (318)
T 2dyl_A 179 K---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL------ 249 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC------
T ss_pred c---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC------
Confidence 2 223456899999999984 55688999999999999999999999986544333322222211100
Q ss_pred cccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 923 ASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
.+ .....+..+.+++.+||+.||.+|||++|+++
T Consensus 250 ----------~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 ----------LP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ----------CC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----------CC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 01123457889999999999999999999876
No 279
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.4e-35 Score=327.74 Aligned_cols=242 Identities=24% Similarity=0.386 Sum_probs=199.6
Q ss_pred HHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCC-----chhhHHHHHHHHhcCC--CCcccceEeEEEcC
Q 002010 690 VLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGG-----NDHGFLAEIQTLGRIR--HRNIVRLLGYVSNR 761 (982)
Q Consensus 690 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 761 (982)
+.++|+..+.||+|+||.||+|.. .+++.||||++....... ....+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346799999999999999999964 578999999986543222 2345778999999996 59999999999999
Q ss_pred CccEEEEeccCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc-CCCCEEEeccc
Q 002010 762 DTNLLLYEYMPN-GSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-SDFEAHVADFG 839 (982)
Q Consensus 762 ~~~~lv~e~~~~-~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfG 839 (982)
+..++|||++.+ ++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++ +++.+||+|||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 999999999976 899999973 457899999999999999999999998 99999999999999 78999999999
Q ss_pred cchhccccCCcccccccccccccccccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCC
Q 002010 840 LAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQ 918 (982)
Q Consensus 840 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 918 (982)
++...... ......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||.... .......
T Consensus 196 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~----- 260 (320)
T 3a99_A 196 SGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV----- 260 (320)
T ss_dssp TCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCC-----
T ss_pred cccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccc-----
Confidence 99876532 2234578999999999887765 688999999999999999999996421 1111100
Q ss_pred CCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 919 PSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 261 ----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 ----------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011223457889999999999999999999987
No 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.7e-36 Score=355.44 Aligned_cols=268 Identities=26% Similarity=0.301 Sum_probs=201.0
Q ss_pred HHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEc------C
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSN------R 761 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~ 761 (982)
...++|+..+.||+|+||.||+|.. .+|+.||||++...........+.+|+.++++++||||+++++++.. .
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 3457899999999999999999965 56899999988654444455678999999999999999999998755 6
Q ss_pred CccEEEEeccCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCC---EEEec
Q 002010 762 DTNLLLYEYMPNGSLGEMLHGAK-GGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFE---AHVAD 837 (982)
Q Consensus 762 ~~~~lv~e~~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~D 837 (982)
+..++||||+++++|.+++.... ...+++..++.++.|++.|++|||+.+ |+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcc
Confidence 67799999999999999998533 246899999999999999999999998 999999999999997765 99999
Q ss_pred cccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 838 FGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 838 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
||.+...... .......||+.|+|||++.+..++.++||||+|+++|+|++|..||...... ..|.........
T Consensus 168 FG~a~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---~~~~~~i~~~~~ 241 (676)
T 3qa8_A 168 LGYAKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP---VQWHGKVREKSN 241 (676)
T ss_dssp CCCCCBTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH---HHSSTTCC----
T ss_pred cccccccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch---hhhhhhhhcccc
Confidence 9999876533 2234567899999999999999999999999999999999999999753221 111111100000
Q ss_pred C---CCcccccceeec---CCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHH
Q 002010 918 Q---PSDAASVLAVVD---PRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREV 965 (982)
Q Consensus 918 ~---~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~el 965 (982)
. ..........+. +.........+..+.+++.+||+.||++|||++|+
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0 000000000011 11123556678899999999999999999999773
No 281
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.6e-35 Score=339.11 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=188.5
Q ss_pred hhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEEEec
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 770 (982)
+.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+.+++++ +||||+++++++.+++..++||||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 345667889999999998776678999999998432 245678999999876 899999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCC-----CCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCC-------------CC
Q 002010 771 MPNGSLGEMLHGAKGGH-----LKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSD-------------FE 832 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~-------------~~ 832 (982)
++ |+|.+++....... .++..++.++.||+.||+|||+.+ |+||||||+||+++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 69999997543211 123345789999999999999998 9999999999999754 48
Q ss_pred EEEeccccchhccccCCc--cccccccccccccccccccc-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCC
Q 002010 833 AHVADFGLAKFLQDAGAS--ECMSSVAGSYGYIAPEYAYT-------LKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDG 902 (982)
Q Consensus 833 ~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~ 902 (982)
+||+|||++..+...... .......||+.|+|||++.+ ..++.++||||+||++|||++ |..||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999876543211 12234679999999999875 668999999999999999999 99999754322
Q ss_pred chHHHHHHHhccCCCCCCcccccceeecCCCC-CCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 903 VDIVRWVRKTTSEVSQPSDAASVLAVVDPRLS-GYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
. ..+....... +... ..+...+..+.+++.+||+.||.+|||++|+++
T Consensus 247 ~--~~i~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 E--SNIIRGIFSL---------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H--HHHHHTCCCC---------------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H--HHHhcCCCCc---------------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 2222211110 0011 123456678999999999999999999999985
No 282
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=325.69 Aligned_cols=244 Identities=23% Similarity=0.383 Sum_probs=192.1
Q ss_pred HHHHhhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCCC-----CchhhHHHHHHHHhcC----CCCcccceEeE
Q 002010 688 EDVLESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTG-----GNDHGFLAEIQTLGRI----RHRNIVRLLGY 757 (982)
Q Consensus 688 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l----~h~niv~~~~~ 757 (982)
+.+.++|+..+.||+|+||.||+|.. .+++.||+|++...... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44567899999999999999999965 56889999998544321 1233466799999888 89999999999
Q ss_pred EEcCCccEEEEec-cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEc-CCCCEEE
Q 002010 758 VSNRDTNLLLYEY-MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLD-SDFEAHV 835 (982)
Q Consensus 758 ~~~~~~~~lv~e~-~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl 835 (982)
+...+..++|||+ +++++|.+++.. ...+++..+..++.||+.|++|||+.+ |+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 789999999974 356999999999999999999999998 99999999999999 8899999
Q ss_pred eccccchhccccCCcccccccccccccccccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhcc
Q 002010 836 ADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVD-EKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTS 914 (982)
Q Consensus 836 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 914 (982)
+|||++...... ......|++.|+|||++.+..+. .++||||+|+++|||++|+.||.... .......
T Consensus 182 ~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~- 250 (312)
T 2iwi_A 182 IDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAEL- 250 (312)
T ss_dssp CCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCC-
T ss_pred EEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhcc-
Confidence 999999876532 23446689999999998877664 58999999999999999999996421 1111100
Q ss_pred CCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 915 EVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 251 --------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 251 --------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --------------------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112233457889999999999999999999998
No 283
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=339.49 Aligned_cols=248 Identities=24% Similarity=0.301 Sum_probs=187.0
Q ss_pred hcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEEEecc
Q 002010 693 SLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLLYEYM 771 (982)
Q Consensus 693 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 771 (982)
+|+..+.||+|+||+||.....+++.||||++... ....+.+|+.+++++ +|||||++++++.+....++||||+
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE----CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT----TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 57888899999999976655568999999998432 223466899999999 7999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC-----CCCEEEeccccchhccc
Q 002010 772 PNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS-----DFEAHVADFGLAKFLQD 846 (982)
Q Consensus 772 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~-----~~~~kl~DfG~a~~~~~ 846 (982)
+ |+|.+++.... ....+..+..++.||+.|++|||+.+ |+||||||+||+++. ...+||+|||+|+....
T Consensus 101 ~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 101 A-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp S-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 5 69999997433 34455567789999999999999998 999999999999953 23688999999987653
Q ss_pred cCC-cccccccccccccccccccc---cCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHhccCCCCCCc
Q 002010 847 AGA-SECMSSVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELIA-GKKPVGEFGDGVDIVRWVRKTTSEVSQPSD 921 (982)
Q Consensus 847 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (982)
... ........||+.|+|||++. ...++.++||||+||++|||++ |..||...... ..........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~------- 246 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QANILLGACS------- 246 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HHHHHTTCCC-------
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HHHHHhccCC-------
Confidence 321 12334567999999999987 4567889999999999999999 99999653221 1111111000
Q ss_pred ccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 922 AASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
......+......+.+++.+||+.||.+|||++|+++
T Consensus 247 ---------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 247 ---------LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---------CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---------ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000112234556889999999999999999999984
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.3e-34 Score=325.23 Aligned_cols=311 Identities=20% Similarity=0.211 Sum_probs=262.4
Q ss_pred hhhhHHHHhhcccccccccCCCC-CCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCC
Q 002010 214 RLKNLREMYIGYFNTYTGGIPPG-FGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLK 292 (982)
Q Consensus 214 ~l~~L~~L~l~~~n~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 292 (982)
.+.+++.|++.. +.+ +.+|.. |..+++|++|++++|.+++..+..|..+++|++|+|++|++++..|..+..+++|+
T Consensus 43 ~l~~l~~l~l~~-~~l-~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 120 (390)
T 3o6n_A 43 TLNNQKIVTFKN-STM-RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 120 (390)
T ss_dssp GGCCCSEEEEES-CEE-SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ccCCceEEEecC-Cch-hhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCC
Confidence 367888888875 333 345554 78999999999999999988888999999999999999999998888899999999
Q ss_pred EEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEecccc
Q 002010 293 SLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNH 372 (982)
Q Consensus 293 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 372 (982)
+|+|++|.++...+..|..+++|++|++++|++++..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.
T Consensus 121 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 121 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSC
T ss_pred EEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccc
Confidence 999999999966666679999999999999999998899999999999999999999964 36778999999999999
Q ss_pred ccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcc
Q 002010 373 LTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEK 452 (982)
Q Consensus 373 l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 452 (982)
+++. ....+|++|++++|.+...... ..++|+.|++++|++++. ..+..+
T Consensus 198 l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l-------------------- 247 (390)
T 3o6n_A 198 LSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNY-------------------- 247 (390)
T ss_dssp CSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGC--------------------
T ss_pred cccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCC--------------------
Confidence 9843 3446899999999998765332 347899999999988743 334433
Q ss_pred cccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCe
Q 002010 453 MSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTS 532 (982)
Q Consensus 453 ~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 532 (982)
++|++|++++|++++..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.
T Consensus 248 ---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 248 ---PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp ---TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ---CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 356667777777777778888899999999999999984 6777778899999999999998 56777889999999
Q ss_pred eeCCCCcccCCCCcccccccccceEEccccccccc
Q 002010 533 VDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGS 567 (982)
Q Consensus 533 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 567 (982)
|+|++|.|++. | +..+++|+.|+|++|+++..
T Consensus 323 L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 323 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred EECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 99999999854 3 77889999999999999863
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.1e-34 Score=342.63 Aligned_cols=311 Identities=19% Similarity=0.143 Sum_probs=161.0
Q ss_pred ccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccE
Q 002010 93 LLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRH 172 (982)
Q Consensus 93 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 172 (982)
.+++++.|++++|.++...+..+..+++|++|+|++|.+.+. +...+..+++|++|+|++|.+++..|..|+++++|++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEI-DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEE-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCC-ChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 356667777777776654444556666666666666666543 2234455666666666666666555555566666666
Q ss_pred EeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCc
Q 002010 173 LSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCN 252 (982)
Q Consensus 173 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 252 (982)
|+|++|.+++..+..|+++++|++|+|++|.+.+ ..|..|+.+++|++|+|++|.
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-------------------------~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-------------------------IEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-------------------------CCTTTTTTCTTCCEEECTTSC
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC-------------------------CChhhhhcCCcCcEEECcCCC
Confidence 6666666654444444555555555555544332 223334455555555555555
Q ss_pred CcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCc
Q 002010 253 ISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSF 332 (982)
Q Consensus 253 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 332 (982)
+++.. ++.+++|+.|++++|.+++ +....+|+.|++++|.++.. +..+ .++|+.|+|++|.+++
T Consensus 183 l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~----- 246 (597)
T 3oja_B 183 LTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD----- 246 (597)
T ss_dssp CSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC-----
T ss_pred CCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC-----
Confidence 55431 3344555555555555542 22334455555555555422 2111 1344444444444443
Q ss_pred CCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCC
Q 002010 333 LGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLT 412 (982)
Q Consensus 333 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~ 412 (982)
+..+..+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++ +|..+..+++|+
T Consensus 247 ---------------------~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~ 304 (597)
T 3oja_B 247 ---------------------TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLK 304 (597)
T ss_dssp ---------------------CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCC
T ss_pred ---------------------ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCc
Confidence 2334444444444444444444444444444444445554444443 233444455555
Q ss_pred EEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCC
Q 002010 413 KIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITG 470 (982)
Q Consensus 413 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~ 470 (982)
.|+|++|.++ .+|..+..+++|+.|++++|.+++.... ..++|+.|++++|.+.+
T Consensus 305 ~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 305 VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLS--THHTLKNLTLSHNDWDC 359 (597)
T ss_dssp EEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCC--TTCCCSEEECCSSCEEH
T ss_pred EEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChh--hcCCCCEEEeeCCCCCC
Confidence 5555555555 4444555555555555555555543211 22466777777777664
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-33 Score=315.92 Aligned_cols=308 Identities=27% Similarity=0.314 Sum_probs=222.9
Q ss_pred CCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccch
Q 002010 236 GFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNL 315 (982)
Q Consensus 236 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 315 (982)
.+..+++|+.|++++|.+.. ++ .+..+++|++|++++|++++..+ +..+++|++|++++|.+++ ++ .+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 35577888999999988874 34 37888888888888888885433 8888888888888888885 33 57778888
Q ss_pred hhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccc
Q 002010 316 TLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQN 395 (982)
Q Consensus 316 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N 395 (982)
++|++++|.+.+..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 888888888875433 7777888888888875553333 36677777777777777664322 445555555555555
Q ss_pred cccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchh
Q 002010 396 FFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAA 475 (982)
Q Consensus 396 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~ 475 (982)
.+.+..+ +..+++|+.|++++|.++ +..+ .....+|++|++++|++++..+
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~------------------------~~~~-~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQIT------------------------DITP-VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCC------------------------CCGG-GGGCTTCCEEECCSSCCCCCGG--
T ss_pred ccccccc--ccCCCccceeecccCCCC------------------------CCch-hhcCCcCCEEEccCCccCCCcc--
Confidence 5443222 444555555555555444 3322 2223567777777777775444
Q ss_pred ccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccc
Q 002010 476 IGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLS 555 (982)
Q Consensus 476 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 555 (982)
+..+++|++|++++|++++ + ..+..+++|++|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 7888899999999998875 3 4577888999999999999864 4588899999999999999988888899999999
Q ss_pred eEEcccccccccCccccccccccceecccCCccc
Q 002010 556 ILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLI 589 (982)
Q Consensus 556 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 589 (982)
.|+|++|++++..| +..+++|++|++++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999997666 888999999999999875
No 287
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.7e-34 Score=319.19 Aligned_cols=272 Identities=21% Similarity=0.252 Sum_probs=169.2
Q ss_pred cCchhHHHHHHHHHhcccCCCCCCCCCCCCC-CCCCCCCccceeeeCC---------CCCEEEEEeccCCccccCCcCcc
Q 002010 23 SCAYSDMDVLLKLKSSMIGPKGSGLKNWEPS-SSPSAHCSFSGVTCDQ---------DSRVVSLNVSFMPLFGSIPPEIG 92 (982)
Q Consensus 23 ~~~~~~~~~ll~~k~~~~~~~~~~~~~w~~~-~~~~~~C~w~gv~C~~---------~~~v~~l~l~~~~l~g~~~~~i~ 92 (982)
++..+|++||++||+++..++.+.+++|... ....++|.|.|+.|+. .++|+.|+++++.+. .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 4667899999999999976655678899411 1245789999999952 257777777777766 6777777
Q ss_pred ccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccc------
Q 002010 93 LLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIAS------ 166 (982)
Q Consensus 93 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~------ 166 (982)
.+++|++|+|++|+++ .+|..++.+++|++|+|++|.++ .+|. .+.++++|++|+|++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 7777777777777777 67777777777777777766665 3332 2455666666666665555555555443
Q ss_pred ---cccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCC
Q 002010 167 ---LKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQL 243 (982)
Q Consensus 167 ---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L 243 (982)
+++|++|+|++|+++ .+|.. ++.+++|
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~-------------------------------------------------l~~l~~L 208 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPAS-------------------------------------------------IANLQNL 208 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGG-------------------------------------------------GGGCTTC
T ss_pred hccCCCCCEEECcCCCcC-cchHh-------------------------------------------------hcCCCCC
Confidence 444444444444444 33433 4444555
Q ss_pred CEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccC
Q 002010 244 QVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKN 323 (982)
Q Consensus 244 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 323 (982)
++|+|++|++++ +|..++.+++|++|+|++|.+.+.+|..+..+++|++|+|++|.+.+.+|..+..+++|++|+|++|
T Consensus 209 ~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 287 (328)
T 4fcg_A 209 KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC 287 (328)
T ss_dssp CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTC
T ss_pred CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCC
Confidence 555555555553 3334555555555555555555555555555555555555555555555555555555566666655
Q ss_pred CCCCCCCCcCCCCCCccEEEccCCCc
Q 002010 324 NLRGPIPSFLGDFPNLEVLQVWGNNF 349 (982)
Q Consensus 324 ~l~~~~p~~~~~l~~L~~L~L~~N~l 349 (982)
++.+.+|..++++++|+.+++..|.+
T Consensus 288 ~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 288 VNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CchhhccHHHhhccCceEEeCCHHHH
Confidence 55555565566666666665554443
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-33 Score=309.34 Aligned_cols=230 Identities=22% Similarity=0.249 Sum_probs=182.1
Q ss_pred HHHHhhcccc-cccccccceEEEEEEe-CCCcEEEEEEeccCCCCCchhhHHHHHHHH-hcCCCCcccceEeEEEc----
Q 002010 688 EDVLESLKDE-NIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGTGGNDHGFLAEIQTL-GRIRHRNIVRLLGYVSN---- 760 (982)
Q Consensus 688 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~---- 760 (982)
..+.++|... +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++..
T Consensus 13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 3455677776 7899999999999965 5689999999842 34577899887 55589999999999876
Q ss_pred CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcC---CCCEEEec
Q 002010 761 RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDS---DFEAHVAD 837 (982)
Q Consensus 761 ~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~D 837 (982)
....++||||+++++|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||+++. ++.+||+|
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECC
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEec
Confidence 667899999999999999998766678999999999999999999999998 999999999999998 78999999
Q ss_pred cccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCC
Q 002010 838 FGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVS 917 (982)
Q Consensus 838 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 917 (982)
||++.... +..++.++||||+||++|||++|+.||........ ....
T Consensus 164 fg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----~~~~----- 210 (299)
T 3m2w_A 164 FGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----SPGM----- 210 (299)
T ss_dssp CTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCS-----
T ss_pred cccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----hHHH-----
Confidence 99986432 13467899999999999999999999975332110 0000
Q ss_pred CCCcccccceeecCCCCCCC----hHhHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002010 918 QPSDAASVLAVVDPRLSGYP----LTGVIHLFKVAMMCVEDESSARPTMREVVH 967 (982)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 967 (982)
...+.......+ ...+..+.+++.+||+.||++|||++|+++
T Consensus 211 --------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 211 --------KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp --------CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000000111 234567899999999999999999999987
No 289
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.7e-34 Score=312.74 Aligned_cols=229 Identities=15% Similarity=0.114 Sum_probs=183.2
Q ss_pred hhcccccccccccceEEEEEEeC-CCcEEEEEEeccCCCCC--chhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEEE
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGTGG--NDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 768 (982)
++|++.+.||+|+||.||+|... +++.||+|++....... ....+.+|+.++.+++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 67999999999999999999764 48999999986543322 2367899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccC
Q 002010 769 EYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAG 848 (982)
Q Consensus 769 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 848 (982)
||+++++|.+++.. .....++.+++.|++.|++|||+.+ |+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc---------
Confidence 99999999999952 2466678899999999999999998 9999999999999999999998543
Q ss_pred CcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCccccccee
Q 002010 849 ASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAV 928 (982)
Q Consensus 849 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (982)
|++| ++.++||||+||++|||++|+.||............ ...
T Consensus 175 -------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-----------------~~~ 217 (286)
T 3uqc_A 175 -------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-----------------ERD 217 (286)
T ss_dssp -------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----------------CBC
T ss_pred -------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----------------HHH
Confidence 3332 678999999999999999999999764322110000 000
Q ss_pred ecCCC---CCCChHhHHHHHHHHhhccCCCCCCCCCHHHHHHHhcCCCC
Q 002010 929 VDPRL---SGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQ 974 (982)
Q Consensus 929 ~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~~~~ 974 (982)
..... .......+..+.+++.+||+.||++| |++|+++.|+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 218 TAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp TTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred hccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00000 01123345678999999999999999 99999999977544
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.6e-33 Score=311.59 Aligned_cols=308 Identities=22% Similarity=0.306 Sum_probs=247.6
Q ss_pred HHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCC
Q 002010 211 FLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLIS 290 (982)
Q Consensus 211 ~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 290 (982)
.+..+++|++|++.++. +. .+| .+..+++|++|++++|++++..+ +..+++|++|++++|+++.. +.+..+++
T Consensus 39 ~~~~l~~L~~L~l~~~~-i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEK-VA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSC-CC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred cchhcccccEEEEeCCc-cc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCc
Confidence 45688999999998643 32 343 48999999999999999996544 99999999999999999963 46999999
Q ss_pred CCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEecc
Q 002010 291 LKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTS 370 (982)
Q Consensus 291 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 370 (982)
|++|++++|.+++. +. +..+++|+.|++++|.....++ .+..+++|++|++++|.+....+ +..+++|+.|++++
T Consensus 112 L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~ 186 (347)
T 4fmz_A 112 LRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNY 186 (347)
T ss_dssp CSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTT
T ss_pred CCEEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccC
Confidence 99999999999964 33 8899999999999997664444 48999999999999999986544 88999999999999
Q ss_pred ccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCC
Q 002010 371 NHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELP 450 (982)
Q Consensus 371 N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 450 (982)
|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++
T Consensus 187 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~-------- 252 (347)
T 4fmz_A 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGT-------- 252 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS--------
T ss_pred Cccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCC--------
Confidence 99985443 8889999999999999987655 8899999999999999985433 55555555555555
Q ss_pred cccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCC
Q 002010 451 EKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSL 530 (982)
Q Consensus 451 ~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 530 (982)
|++++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..|..++.+++|
T Consensus 253 ---------------n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 253 ---------------NQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp ---------------SCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred ---------------CccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 444432 3467778888888888888743 346778888888888888887777888888888
Q ss_pred CeeeCCCCcccCCCCcccccccccceEEccccccc
Q 002010 531 TSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGIT 565 (982)
Q Consensus 531 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 565 (982)
+.|+|++|++++..| +..+++|+.|++++|.|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888888886555 788888888888888875
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.1e-34 Score=346.65 Aligned_cols=237 Identities=23% Similarity=0.304 Sum_probs=190.4
Q ss_pred hhcccccccccccceEEEEEEeC--CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeEEEcCCc-----c
Q 002010 692 ESLKDENIIGKGGAGIVYRGSMP--DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDT-----N 764 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~ 764 (982)
++|++.+.||+|+||.||+|... +++.||||++...........+.+|+.++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999764 5899999988654444445678899999999999999999999987665 6
Q ss_pred EEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhc
Q 002010 765 LLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 765 ~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
|+||||+++++|.+++.. .+++.++..++.||+.||+|||+++ |+||||||+||+++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999988752 7999999999999999999999998 9999999999999886 9999999999865
Q ss_pred cccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccc
Q 002010 845 QDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAAS 924 (982)
Q Consensus 845 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (982)
... ....||+.|+|||++.+. ++.++||||+||++|+|++|.+||....... . +.
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------~--~~---- 286 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------L--PE---- 286 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------C--CT----
T ss_pred ccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc------------c--cc----
Confidence 432 446799999999988765 4899999999999999999998876411000 0 00
Q ss_pred cceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCC-HHHHHHHhc
Q 002010 925 VLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPT-MREVVHMLA 970 (982)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~ell~~L~ 970 (982)
..........+.+++.+||+.||++||+ ++++.+.|.
T Consensus 287 ---------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 287 ---------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp ---------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ---------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 0000122346889999999999999995 555655553
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-34 Score=327.01 Aligned_cols=241 Identities=13% Similarity=0.110 Sum_probs=179.7
Q ss_pred hhcccccccccccceEEEEEEe-CCCcEEEEEEeccCCC--CCchhhHHHHHHHHhcCCC-Ccccc---------eE---
Q 002010 692 ESLKDENIIGKGGAGIVYRGSM-PDGIDVAIKRLVGRGT--GGNDHGFLAEIQTLGRIRH-RNIVR---------LL--- 755 (982)
Q Consensus 692 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h-~niv~---------~~--- 755 (982)
..|+.++.||+|+||+||+|.+ .+|+.||||++..... ....+.+.+|+.+++.++| ++... ..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577888999999999999974 5699999999863332 2335678999999999976 22111 11
Q ss_pred ---------eEEEc-----CCccEEEEeccCCCCHHHHhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q 002010 756 ---------GYVSN-----RDTNLLLYEYMPNGSLGEMLH-----GAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLII 816 (982)
Q Consensus 756 ---------~~~~~-----~~~~~lv~e~~~~~sL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 816 (982)
.++.. ....+++|+++ +++|.+++. ......+++..+..++.||++||+|||+.+ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 11111 12346677766 789999884 233456788899999999999999999998 99
Q ss_pred ecCCCCCcEEEcCCCCEEEeccccchhccccCCccccccccccccccccccc----------ccCCCCcchhhHHHHHHH
Q 002010 817 HRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYA----------YTLKVDEKSDVYSFGVVL 886 (982)
Q Consensus 817 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~il 886 (982)
||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||||+||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999998765432 344567 999999998 556688999999999999
Q ss_pred HHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002010 887 LELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVV 966 (982)
Q Consensus 887 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell 966 (982)
|||++|+.||.......... ..+. . ....+..+.+++.+||+.||++|||+.|++
T Consensus 308 ~elltg~~Pf~~~~~~~~~~--------------------~~~~-~----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGSE--------------------WIFR-S----CKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCSG--------------------GGGS-S----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhhHH--------------------HHHh-h----cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999997532211000 0000 0 012235789999999999999999987764
Q ss_pred H
Q 002010 967 H 967 (982)
Q Consensus 967 ~ 967 (982)
+
T Consensus 363 ~ 363 (413)
T 3dzo_A 363 E 363 (413)
T ss_dssp T
T ss_pred h
Confidence 3
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-32 Score=303.97 Aligned_cols=288 Identities=19% Similarity=0.231 Sum_probs=197.8
Q ss_pred ccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEcc
Q 002010 266 LLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVW 345 (982)
Q Consensus 266 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 345 (982)
+++.+++++|.++ .+|..+. ++|+.|++++|.+++..|..|..+++|++|++++|++++..|..|+.+++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4566666666665 3444332 455666666665554444555555555555555555555445555555555555555
Q ss_pred CCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccC--C
Q 002010 346 GNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLN--G 423 (982)
Q Consensus 346 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~--~ 423 (982)
+|+++ .+|..+. ++|++|++++|.+.+..+..+.++++|++|++++|.++ +
T Consensus 111 ~n~l~-------------------------~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 163 (332)
T 2ft3_A 111 KNHLV-------------------------EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSG 163 (332)
T ss_dssp SSCCC-------------------------SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGG
T ss_pred CCcCC-------------------------ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCC
Confidence 55554 2333222 45555555555555544555666666666666666664 2
Q ss_pred CCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccc
Q 002010 424 TIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNL 503 (982)
Q Consensus 424 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 503 (982)
..|..+..+ +|+.|++++|.+++. |..+. .+|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+
T Consensus 164 ~~~~~~~~l-~L~~L~l~~n~l~~l-~~~~~-~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 164 FEPGAFDGL-KLNYLRISEAKLTGI-PKDLP-ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp SCTTSSCSC-CCSCCBCCSSBCSSC-CSSSC-SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred CCcccccCC-ccCEEECcCCCCCcc-Ccccc-CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 455555555 666666666666653 32222 578888888888888888889999999999999999998777788899
Q ss_pred cccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccc------cccceEEccccccc--ccCccccccc
Q 002010 504 KMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKL------IDLSILNLSRNGIT--GSIPNEMRNM 575 (982)
Q Consensus 504 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--~~~p~~l~~l 575 (982)
++|++|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|... ..|+.|++++|.+. +..|..|..+
T Consensus 241 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l 319 (332)
T 2ft3_A 241 PTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCV 319 (332)
T ss_dssp TTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTB
T ss_pred CCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccccc
Confidence 99999999999998 788889999999999999999997777777654 67899999999987 6788889999
Q ss_pred cccceecccCCc
Q 002010 576 MSLTTLDLSYNN 587 (982)
Q Consensus 576 ~~L~~L~Ls~N~ 587 (982)
++|+.+++++|+
T Consensus 320 ~~L~~l~l~~n~ 331 (332)
T 2ft3_A 320 TDRLAIQFGNYK 331 (332)
T ss_dssp CCSTTEEC----
T ss_pred chhhhhhccccc
Confidence 999999999885
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.3e-32 Score=301.30 Aligned_cols=290 Identities=23% Similarity=0.244 Sum_probs=219.3
Q ss_pred CccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEc
Q 002010 265 KLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQV 344 (982)
Q Consensus 265 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 344 (982)
.+++.++++++.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|+.+++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 46788888888888 4565543 57888888888888777777888888888888888888777888888888888888
Q ss_pred cCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccccccc--ccCCccccCCCCCCEEEccCCccC
Q 002010 345 WGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFI--GPIPEELGQCKSLTKIRFSKNYLN 422 (982)
Q Consensus 345 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~--~~~~~~l~~l~~L~~L~Ls~N~l~ 422 (982)
++|+++ .+|..+. ++|+.|++++|++++..+..+..+++|+.|++++|.+. +..+..+.++++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 888877 3444433 56777777777776555555566666666666666653 244555555566666666655554
Q ss_pred CCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCcccccc
Q 002010 423 GTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFN 502 (982)
Q Consensus 423 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 502 (982)
.+|.. +. .+|++|++++|++++..|..|..+++|++|++++|++++..+..+..
T Consensus 185 -~l~~~------------------------~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 185 -TIPQG------------------------LP-PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp -SCCSS------------------------CC-TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred -cCCcc------------------------cc-ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 22221 11 57888888888888888888999999999999999998777778888
Q ss_pred ccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccc------cccceEEcccccccc--cCcccccc
Q 002010 503 LKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKL------IDLSILNLSRNGITG--SIPNEMRN 574 (982)
Q Consensus 503 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~--~~p~~l~~ 574 (982)
+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|+.. ..|+.|++++|.+.. ..|..|..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 999999999999998 788889999999999999999997777777544 788999999999864 66788999
Q ss_pred ccccceecccCCc
Q 002010 575 MMSLTTLDLSYNN 587 (982)
Q Consensus 575 l~~L~~L~Ls~N~ 587 (982)
+.+++.++|++|+
T Consensus 318 ~~~l~~l~L~~N~ 330 (330)
T 1xku_A 318 VYVRAAVQLGNYK 330 (330)
T ss_dssp CCCGGGEEC----
T ss_pred ccceeEEEecccC
Confidence 9999999999985
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.1e-33 Score=314.98 Aligned_cols=243 Identities=16% Similarity=0.086 Sum_probs=184.4
Q ss_pred HhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCC-------CCchhhHHHHHHHHhcCC---------CCcccce
Q 002010 691 LESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGT-------GGNDHGFLAEIQTLGRIR---------HRNIVRL 754 (982)
Q Consensus 691 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------h~niv~~ 754 (982)
.++|+..+.||+|+||+||+|+. +|+.||||++..... ....+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999987 789999999965532 223467889999998886 6666665
Q ss_pred EeE-----------------EEc-------------CCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 002010 755 LGY-----------------VSN-------------RDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGL 804 (982)
Q Consensus 755 ~~~-----------------~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l 804 (982)
.+. +.+ ....++||||+++|++.+.+.+ ..+++..+..++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 554 332 6788999999999977666642 5689999999999999999
Q ss_pred HHHh-hcCCCcEEecCCCCCcEEEcCCC--------------------CEEEeccccchhccccCCcccccccccccccc
Q 002010 805 CYLH-HDCSPLIIHRDVKSNNILLDSDF--------------------EAHVADFGLAKFLQDAGASECMSSVAGSYGYI 863 (982)
Q Consensus 805 ~~LH-~~~~~~ivHrDlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~ 863 (982)
+||| +.+ |+||||||+||+++.++ .+||+|||+|+...+ ....||+.|+
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSM 244 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTT
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeeccc
Confidence 9999 898 99999999999999887 899999999987653 2347899999
Q ss_pred cccccccCCCCcchhhHHHHHH-HHHHHhCCCCCCCCCCCchHHHHHHHhccCCCCCCcccccceeecCCCCCCChHhHH
Q 002010 864 APEYAYTLKVDEKSDVYSFGVV-LLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVI 942 (982)
Q Consensus 864 aPE~~~~~~~~~~~DvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (982)
|||++.+.. +.++||||++++ .+++++|..||............+....... .......+...+.
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~s~ 310 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK-------------TKCNTPAMKQIKR 310 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS-------------SCCCSHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC-------------cccchhhhhhcCH
Confidence 999998766 899999998777 7788889999843100000111111100000 0001112345677
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHH
Q 002010 943 HLFKVAMMCVEDESSARPTMREVV 966 (982)
Q Consensus 943 ~l~~li~~cl~~dP~~Rpt~~ell 966 (982)
++.+|+.+||+.| |++|++
T Consensus 311 ~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 311 KIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHhccC-----CHHHHH
Confidence 8999999999976 999988
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=8.9e-32 Score=298.90 Aligned_cols=289 Identities=21% Similarity=0.270 Sum_probs=221.4
Q ss_pred CCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhh
Q 002010 241 TQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQL 320 (982)
Q Consensus 241 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 320 (982)
.+|+.++++++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|++
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 47999999999998 6676664 68999999999999888889999999999999999999888999999999999999
Q ss_pred ccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccc--cCCccccCccccceeeccccccc
Q 002010 321 FKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTG--TIPRDLCKGGKLKSLILMQNFFI 398 (982)
Q Consensus 321 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~~~~L~~L~l~~N~~~ 398 (982)
++|+++ .+|..+. ++|++|++++|.++...+..+..+++|+.|++++|.++. ..|..+..+ +|++|++++|.+.
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999999 5565554 789999999999997777778888999999999998863 555555555 6666666666655
Q ss_pred ccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccC
Q 002010 399 GPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGN 478 (982)
Q Consensus 399 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~ 478 (982)
+ +|..+. ++|++|++++|++++..+..+..+++ |+.|++++|++++..+..+..
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~-----------------------L~~L~L~~N~l~~~~~~~~~~ 239 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSK-----------------------LYRLGLGHNQIRMIENGSLSF 239 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTT-----------------------CSCCBCCSSCCCCCCTTGGGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCC-----------------------CCEEECCCCcCCcCChhHhhC
Confidence 4 333322 45556666666665554455555544 555555555555556667777
Q ss_pred CCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCccccc------ccCCCeeeCCCCccc--CCCCccccc
Q 002010 479 LPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQ------CHSLTSVDLSRNSLY--GKIPPGISK 550 (982)
Q Consensus 479 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~ 550 (982)
+++|++|++++|+++ .+|..+..+++|++|++++|+|++..+..|.. ...|+.|++++|.+. +..|..|..
T Consensus 240 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp CTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 788888888888887 67777778888888888888888766666654 367889999999887 677788999
Q ss_pred ccccceEEccccc
Q 002010 551 LIDLSILNLSRNG 563 (982)
Q Consensus 551 l~~L~~L~Ls~N~ 563 (982)
+++|+.|+|++|+
T Consensus 319 l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 319 VTDRLAIQFGNYK 331 (332)
T ss_dssp BCCSTTEEC----
T ss_pred cchhhhhhccccc
Confidence 9999999998885
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=2e-31 Score=295.95 Aligned_cols=292 Identities=24% Similarity=0.258 Sum_probs=236.0
Q ss_pred CCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 239 ALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 239 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
...+++.++++++.++ .+|..+. ++|+.|++++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|
T Consensus 29 c~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERL 105 (330)
T ss_dssp CEEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CcCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEE
Confidence 3458999999999998 5666554 689999999999998888889999999999999999998889999999999999
Q ss_pred hhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccc--cCCccccCccccceeeccccc
Q 002010 319 QLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTG--TIPRDLCKGGKLKSLILMQNF 396 (982)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~~~~L~~L~l~~N~ 396 (982)
++++|+++ .+|..+. ++|++|++++|.++...+..+..+++|++|++++|.++. ..+..+..+++|++|++++|.
T Consensus 106 ~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 106 YLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp ECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred ECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 99999999 4565554 799999999999998888889999999999999999964 778889999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhc
Q 002010 397 FIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAI 476 (982)
Q Consensus 397 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~ 476 (982)
+.. +|..+. ++|++|++++|++++..|..+..+++|+.|++++|.++ +..+..+
T Consensus 183 l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-----------------------~~~~~~~ 236 (330)
T 1xku_A 183 ITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS-----------------------AVDNGSL 236 (330)
T ss_dssp CCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-----------------------EECTTTG
T ss_pred ccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc-----------------------eeChhhc
Confidence 885 455443 79999999999999877777877766665555555554 4444566
Q ss_pred cCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCccccc------ccCCCeeeCCCCcccC--CCCccc
Q 002010 477 GNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQ------CHSLTSVDLSRNSLYG--KIPPGI 548 (982)
Q Consensus 477 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~ 548 (982)
..+++|++|++++|+++ .+|..+..+++|++|++++|+|++..+..|.. ...|+.|++++|.+.. ..|..|
T Consensus 237 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f 315 (330)
T 1xku_A 237 ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315 (330)
T ss_dssp GGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGG
T ss_pred cCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccc
Confidence 66777777777777776 66666777777777777777777666655543 3678889999998853 556788
Q ss_pred ccccccceEEccccc
Q 002010 549 SKLIDLSILNLSRNG 563 (982)
Q Consensus 549 ~~l~~L~~L~Ls~N~ 563 (982)
..+.+|+.++|++|+
T Consensus 316 ~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 316 RCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTCCCGGGEEC----
T ss_pred ccccceeEEEecccC
Confidence 889999999999885
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.8e-35 Score=344.87 Aligned_cols=263 Identities=19% Similarity=0.187 Sum_probs=177.5
Q ss_pred cccccEEEeccCCCCCCCChh-hhhhcccceeeccCCccccc---cchhhhhcCCCccEEeccCccccCCCchhcc-ccc
Q 002010 94 LTKLVNLTISNVNLTGRLPSE-MALLTSLKVFNISGNVFQGN---FAGQIVRGMTELQVLDAYNNNFTGPLPVEIA-SLK 168 (982)
Q Consensus 94 l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~Ls~n~l~~~---~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~ 168 (982)
+++|++|+|++|+++...... +..+++|++|+|++|.+.+. ....++..+++|++|+|++|.+++..+..+. .++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 357889999999887654433 77888999999999988753 2234566788899999999888765555544 355
Q ss_pred ----cccEEeecCccccc----ccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCC
Q 002010 169 ----SLRHLSFGGNYFTG----KIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGAL 240 (982)
Q Consensus 169 ----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l 240 (982)
+|++|+|++|+++. .++..+..+++|++|++++|.+.+..+..+... .....
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~--------------------l~~~~ 141 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG--------------------LLDPQ 141 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH--------------------HTSTT
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH--------------------HhcCC
Confidence 68889998888884 457778888888888888888765544443321 02234
Q ss_pred CCCCEEecccCcCcccC----chhhcCCCccceeecccccCCCCCCcccc-----CCCCCCEEEeeCCcccCc----Cch
Q 002010 241 TQLQVLDMASCNISGEI----PTSLSRLKLLHSLFLQMNKLTGHIPPQLS-----GLISLKSLDLSLNYLTGE----IPE 307 (982)
Q Consensus 241 ~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~L~Ls~N~l~~~----~~~ 307 (982)
++|++|++++|++++.. +..+..+++|++|++++|.++...+..+. ..++|++|++++|.+++. ++.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 57888888888887643 45566678888888888887754444443 255788888888877753 355
Q ss_pred hhhcccchhhhhhccCCCCCCC-----CCcCCCCCCccEEEccCCCcccc----cCccccCCCcccEEEecccccccc
Q 002010 308 SFAALKNLTLLQLFKNNLRGPI-----PSFLGDFPNLEVLQVWGNNFTFE----LPENLGRNGKLLILDVTSNHLTGT 376 (982)
Q Consensus 308 ~l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~ 376 (982)
.+..+++|++|++++|.+++.. +..+..+++|++|++++|.++.. ++..+..+++|++|++++|.+++.
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 5666677777777777666432 22233466667777766666643 344455566666666666665543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.6e-35 Score=345.50 Aligned_cols=363 Identities=20% Similarity=0.183 Sum_probs=191.5
Q ss_pred CCccEEeccCccccCCCchh-ccccccccEEeecCcccccc----cCCCccccCcceEeeccCcccccchhhHHhhhhhH
Q 002010 144 TELQVLDAYNNNFTGPLPVE-IASLKSLRHLSFGGNYFTGK----IPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNL 218 (982)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L 218 (982)
++|++|||++|+++...... +..+++|++|+|++|++++. ++..+..+++|++|++++|.+.+..+..+...
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~--- 79 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQG--- 79 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHT---
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHH---
Confidence 56888999998887544333 77888899999999988753 45566677888888888877765444333210
Q ss_pred HHHhhcccccccccCCCCCCC-CCCCCEEecccCcCcc----cCchhhcCCCccceeecccccCCCCCCcccc-----CC
Q 002010 219 REMYIGYFNTYTGGIPPGFGA-LTQLQVLDMASCNISG----EIPTSLSRLKLLHSLFLQMNKLTGHIPPQLS-----GL 288 (982)
Q Consensus 219 ~~L~l~~~n~~~~~~p~~~~~-l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~-----~l 288 (982)
+.. .++|++|+|++|+++. .++..+..+++|++|++++|.+++..+..+. ..
T Consensus 80 ------------------l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 80 ------------------LQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp ------------------TCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred ------------------HhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 111 1267888888888774 4466777777788888877777654333322 24
Q ss_pred CCCCEEEeeCCcccCcC----chhhhcccchhhhhhccCCCCCCCCCcCC-----CCCCccEEEccCCCcccc----cCc
Q 002010 289 ISLKSLDLSLNYLTGEI----PESFAALKNLTLLQLFKNNLRGPIPSFLG-----DFPNLEVLQVWGNNFTFE----LPE 355 (982)
Q Consensus 289 ~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~~~ 355 (982)
++|++|+|++|++++.. +..+..+++|++|++++|.+++..+..+. ..++|++|++++|.++.. ++.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 56777777777776533 33444455666666666655543222222 134555555555555532 233
Q ss_pred cccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCC----CCccccC
Q 002010 356 NLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGT----IPAGLFN 431 (982)
Q Consensus 356 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~ 431 (982)
.+..+++|+.|++++|++++.....++ +..+..+++|++|++++|++++. ++..+..
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~-------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 282 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELC-------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA 282 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHH-------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHH-------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh
Confidence 444445555555555544432111000 11122345555555555555432 3333334
Q ss_pred CCccccccCCCccccccCCcccc------cCCccEEEeeccccCCC----CchhccCCCCcceeeeccccccCCCccccc
Q 002010 432 LPLLNMMELDDNLLSGELPEKMS------GASLNQLKVANNNITGK----IPAAIGNLPSLNILSLQNNRLEGEIPVESF 501 (982)
Q Consensus 432 l~~L~~L~L~~N~l~~~~~~~~~------~~~L~~L~L~~N~i~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 501 (982)
+++|++|++++|.+++..+..+. .++|++|++++|.+++. ++..+..+++|++|++++|++++..+..+.
T Consensus 283 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 283 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred CCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 44444444444444322111111 02444555555554433 233444445555555555554433222222
Q ss_pred cccccceeeeeccccCCCCCcccc-cccCCCeeeCCCCcccC----CCCcccccccccceEEcccccccc
Q 002010 502 NLKMITSINISDNNISGEIPYSIS-QCHSLTSVDLSRNSLYG----KIPPGISKLIDLSILNLSRNGITG 566 (982)
Q Consensus 502 ~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 566 (982)
. .+. ..++|+.|+|++|.+++ .+|..+..+++|++|+|++|++++
T Consensus 363 ~--------------------~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 363 Q--------------------GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp H--------------------HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred H--------------------HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 1 000 03455555555555553 445555555555555555555553
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.1e-32 Score=328.18 Aligned_cols=401 Identities=17% Similarity=0.104 Sum_probs=205.2
Q ss_pred ccccccEEEeccCCCCCCCChhhhhh--cccceeeccCCc-cccccchhhhhcCCCccEEeccCccccCC----Cchhcc
Q 002010 93 LLTKLVNLTISNVNLTGRLPSEMALL--TSLKVFNISGNV-FQGNFAGQIVRGMTELQVLDAYNNNFTGP----LPVEIA 165 (982)
Q Consensus 93 ~l~~L~~L~l~~n~l~~~~p~~l~~l--~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~ 165 (982)
.+++|++|+|++|.+++..+..+... .+|++|+|++|. +.......+..++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45666666666666665555555553 336666666665 22111223334566666666666666554 333445
Q ss_pred ccccccEEeecCcccc----cccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhccccccc--ccCCCCCCC
Q 002010 166 SLKSLRHLSFGGNYFT----GKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYT--GGIPPGFGA 239 (982)
Q Consensus 166 ~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~--~~~p~~~~~ 239 (982)
.+++|++|+|++|.++ +.++..+.++++|++|++++|.+.+ ++..+.++++|++|.++.++... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 5666666666666665 2334444556666666666666654 45666666666666665422211 223344556
Q ss_pred CCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCC-ccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 240 LTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIP-PQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 240 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|++|
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEE
T ss_pred cccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEE
Confidence 666666666654322 445555666666666666666543322 224556666666666322222223333445556666
Q ss_pred hhc-----------cCCCCCCC-CCcCCCCCCccEEEccCCCcccccCccccC-CCcccEEEec----cccccccCCccc
Q 002010 319 QLF-----------KNNLRGPI-PSFLGDFPNLEVLQVWGNNFTFELPENLGR-NGKLLILDVT----SNHLTGTIPRDL 381 (982)
Q Consensus 319 ~L~-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~L~L~----~N~l~~~~p~~~ 381 (982)
+++ .|.+++.. +..+..+++|++|+++.|.+++..+..++. +++|+.|+++ .|.+++.....
T Consensus 348 ~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~- 426 (592)
T 3ogk_B 348 RIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN- 426 (592)
T ss_dssp EEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH-
T ss_pred EeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH-
Confidence 665 23333221 111233455555555555555444444433 4555555553 34444320000
Q ss_pred cCccccceeecccccccccCCccccCCCCCCEEEccCCc--cCCCCCcccc-CCCccccccCCCcccccc-CCcccc-cC
Q 002010 382 CKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNY--LNGTIPAGLF-NLPLLNMMELDDNLLSGE-LPEKMS-GA 456 (982)
Q Consensus 382 ~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~L~~N~l~~~-~~~~~~-~~ 456 (982)
.++..+.++++|++|++++|. +++..+..+. .+++|++|++++|.+++. ++..+. .+
T Consensus 427 ------------------~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 488 (592)
T 3ogk_B 427 ------------------GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCP 488 (592)
T ss_dssp ------------------HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCT
T ss_pred ------------------HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCc
Confidence 022223445555555554322 3333332222 244555555555555432 122212 25
Q ss_pred CccEEEeeccccCCC-CchhccCCCCcceeeeccccccCCCcccc-ccccccceeeeecc
Q 002010 457 SLNQLKVANNNITGK-IPAAIGNLPSLNILSLQNNRLEGEIPVES-FNLKMITSINISDN 514 (982)
Q Consensus 457 ~L~~L~L~~N~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N 514 (982)
+|++|++++|.+++. ++..+..+++|++|+|++|++++.....+ ..++.+....+..+
T Consensus 489 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 489 NLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp TCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred ccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 677777777777644 33444567888888888888775422222 24555555555443
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.1e-30 Score=282.11 Aligned_cols=256 Identities=23% Similarity=0.302 Sum_probs=166.6
Q ss_pred CCCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCcccccc
Q 002010 56 PSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNF 135 (982)
Q Consensus 56 ~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 135 (982)
..|.|.|.+|.|+..+ ...+|..+. ++|++|+|++|+++...+..+..+++|++|+|++|.+....
T Consensus 3 ~~C~C~~~~l~c~~~~------------l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKG------------LTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TTCEEETTEEECCSSC------------CSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCCeeCCCEEEcCCCC------------cccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 3566999999998643 224555443 68999999999998544455788999999999999886331
Q ss_pred -chhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccC-CCccccCcceEeeccCcccccchhhHHh
Q 002010 136 -AGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIP-QSYSEIQSLEYIGLNGIGLNGTVPAFLS 213 (982)
Q Consensus 136 -~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~i~~~~~~~l~ 213 (982)
....+.++++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+
T Consensus 69 ~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~------- 140 (306)
T 2z66_A 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV------- 140 (306)
T ss_dssp EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-------
T ss_pred CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-------
Confidence 1233446888888888888887 467778888888888888888875554 456666666666666554432
Q ss_pred hhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcc-cCchhhcCCCccceeecccccCCCCCCccccCCCCCC
Q 002010 214 RLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISG-EIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLK 292 (982)
Q Consensus 214 ~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 292 (982)
..+..++.+++|++|++++|.+++ ..|..+..+++|++|++++|++++..|..+..+++|+
T Consensus 141 ------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 141 ------------------AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp ------------------CSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ------------------cchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 223345555666666666666654 3555566666666666666666655555566666666
Q ss_pred EEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCC-CccEEEccCCCccc
Q 002010 293 SLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFP-NLEVLQVWGNNFTF 351 (982)
Q Consensus 293 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 351 (982)
+|+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|++|++++|++++
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 666666666655454555555666666666666555555555553 55555555555553
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=5.1e-32 Score=326.35 Aligned_cols=408 Identities=14% Similarity=0.038 Sum_probs=254.2
Q ss_pred cchhhhhcCCCccEEeccCccc---cCCCchhcc------------ccccccEEeecCcccccccCCCcccc--CcceEe
Q 002010 135 FAGQIVRGMTELQVLDAYNNNF---TGPLPVEIA------------SLKSLRHLSFGGNYFTGKIPQSYSEI--QSLEYI 197 (982)
Q Consensus 135 ~~~~~~~~l~~L~~L~Ls~n~l---~~~~p~~l~------------~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L 197 (982)
.+..++..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.. ++|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 4567788899999999987532 123333332 67788888888888877777666663 448888
Q ss_pred eccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCccc----CchhhcCCCccceeecc
Q 002010 198 GLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGE----IPTSLSRLKLLHSLFLQ 273 (982)
Q Consensus 198 ~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~ 273 (982)
+|++|.- ..+..+. ..+.++++|++|+|++|.+++. ++..+..+++|++|+++
T Consensus 144 ~L~~~~~--~~~~~l~---------------------~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~ 200 (592)
T 3ogk_B 144 KLDKCSG--FTTDGLL---------------------SIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFY 200 (592)
T ss_dssp EEESCEE--EEHHHHH---------------------HHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECT
T ss_pred ECcCCCC--cCHHHHH---------------------HHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEee
Confidence 8877651 1111111 1123467889999999988766 33456778899999999
Q ss_pred cccCCCC----CCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCC---CCCCCcCCCCCCccEEEccC
Q 002010 274 MNKLTGH----IPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLR---GPIPSFLGDFPNLEVLQVWG 346 (982)
Q Consensus 274 ~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~ 346 (982)
+|++++. ++..+..+++|++|++++|.+.+ ++..+..+++|+.|+++.+... +..+..+..+++|+.|++++
T Consensus 201 ~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~ 279 (592)
T 3ogk_B 201 MTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSY 279 (592)
T ss_dssp TCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETT
T ss_pred ccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccc
Confidence 9988733 34445678899999999998885 6788888899999998864333 23445677888999999888
Q ss_pred CCcccccCccccCCCcccEEEeccccccccCC-ccccCccccceeecccccccccCCccccCCCCCCEEEccC-------
Q 002010 347 NNFTFELPENLGRNGKLLILDVTSNHLTGTIP-RDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSK------- 418 (982)
Q Consensus 347 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~------- 418 (982)
+... .+|..+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++.....+++|++|++++
T Consensus 280 ~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~ 358 (592)
T 3ogk_B 280 MGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGM 358 (592)
T ss_dssp CCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTT
T ss_pred cchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCcccccc
Confidence 6433 567777888899999999988765444 3356788888888884433334444556788888888883
Q ss_pred ----CccCCCCC-ccccCCCccccccCCCccccccCCcccc--cCCccEEEee----ccccCCC-----CchhccCCCCc
Q 002010 419 ----NYLNGTIP-AGLFNLPLLNMMELDDNLLSGELPEKMS--GASLNQLKVA----NNNITGK-----IPAAIGNLPSL 482 (982)
Q Consensus 419 ----N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~L~~L~L~----~N~i~~~-----~p~~~~~l~~L 482 (982)
|.+++... .....+++|++|+++.|.+++..+..+. .++|+.|+++ .|++++. ++..+.++++|
T Consensus 359 ~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L 438 (592)
T 3ogk_B 359 EDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKL 438 (592)
T ss_dssp SSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTC
T ss_pred ccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCC
Confidence 55553211 1123355666666655555544333322 2456666664 4455542 23334455666
Q ss_pred ceeeeccc--cccCCCcccccc-ccccceeeeeccccCC-CCCcccccccCCCeeeCCCCcccCCC-CcccccccccceE
Q 002010 483 NILSLQNN--RLEGEIPVESFN-LKMITSINISDNNISG-EIPYSISQCHSLTSVDLSRNSLYGKI-PPGISKLIDLSIL 557 (982)
Q Consensus 483 ~~L~L~~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L 557 (982)
+.|+++++ .+++..+..+.. +++|++|+|++|++++ .++..+.++++|+.|+|++|.+++.. +..+..+++|+.|
T Consensus 439 ~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 518 (592)
T 3ogk_B 439 RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYL 518 (592)
T ss_dssp CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEE
T ss_pred CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCee
Confidence 66666532 244333333322 5556666666666554 22333455556666666666654332 2333455566666
Q ss_pred Eccccccccc
Q 002010 558 NLSRNGITGS 567 (982)
Q Consensus 558 ~Ls~N~l~~~ 567 (982)
+|++|++++.
T Consensus 519 ~ls~n~it~~ 528 (592)
T 3ogk_B 519 WVQGYRASMT 528 (592)
T ss_dssp EEESCBCCTT
T ss_pred ECcCCcCCHH
Confidence 6666665543
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=280.05 Aligned_cols=279 Identities=16% Similarity=0.135 Sum_probs=179.7
Q ss_pred CCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEE
Q 002010 288 LISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILD 367 (982)
Q Consensus 288 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 367 (982)
++.....++++|.++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 344455677777777 4554443 3666677777776655555666666677776666666665556666666666666
Q ss_pred eccccccccCCccccCccccceeecccccccccCC-ccccCCCCCCEEEccCCc-cCCCCCccccCCCccccccCCCccc
Q 002010 368 VTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIP-EELGQCKSLTKIRFSKNY-LNGTIPAGLFNLPLLNMMELDDNLL 445 (982)
Q Consensus 368 L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~-~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l 445 (982)
+++|++++..+..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|. +++..+..+..+
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l------------- 173 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL------------- 173 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC-------------
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC-------------
Confidence 66666664333335555555555555555543333 345555555555555552 332223333333
Q ss_pred cccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccc-cccccccceeeeeccccCCCCCccc
Q 002010 446 SGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVE-SFNLKMITSINISDNNISGEIPYSI 524 (982)
Q Consensus 446 ~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~ 524 (982)
.+|++|++++|++++..|..++.+++|++|++++|+++ .+|.. +..+++|++|++++|++++..+..+
T Consensus 174 ----------~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 174 ----------TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242 (353)
T ss_dssp ----------CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC--
T ss_pred ----------CCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccccccccc
Confidence 45677777777777777777777888888888888876 34443 3357788888888888876555443
Q ss_pred c---cccCCCeeeCCCCcccC----CCCcccccccccceEEcccccccccCccc-cccccccceecccCCccccCCCC
Q 002010 525 S---QCHSLTSVDLSRNSLYG----KIPPGISKLIDLSILNLSRNGITGSIPNE-MRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 525 ~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+|+ .+|.. |..+++|++|+|++|++++..|.
T Consensus 243 ~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 243 STGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 3 35667777777777765 46777888889999999999998 45544 58889999999999999888764
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=4.6e-28 Score=279.90 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=157.5
Q ss_pred CCCc--cceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCcccccc
Q 002010 58 AHCS--FSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNF 135 (982)
Q Consensus 58 ~~C~--w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 135 (982)
|.|. |..|.|...+ ...+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+.+ +
T Consensus 39 C~C~~~~~~v~c~~~~------------l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-i 103 (440)
T 3zyj_A 39 CSCSNQFSKVICVRKN------------LREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-I 103 (440)
T ss_dssp SEECTTSCEEECCSCC------------CSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-E
T ss_pred CEeCCCCCEEEeCCCC------------cCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-c
Confidence 4453 5677776432 235666554 678899999999998778888888888888888888864 3
Q ss_pred chhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhh
Q 002010 136 AGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRL 215 (982)
Q Consensus 136 ~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l 215 (982)
+...|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|++++|...
T Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l---------- 173 (440)
T 3zyj_A 104 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL---------- 173 (440)
T ss_dssp CGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC----------
T ss_pred ChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc----------
Confidence 4456677888888888888888666667788888888888888877666666666666666666653221
Q ss_pred hhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEE
Q 002010 216 KNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLD 295 (982)
Q Consensus 216 ~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 295 (982)
....+..|.++++|++|+|++|+++ .+| .+..+++|++|+|++|++++..|..|.++++|+.|+
T Consensus 174 --------------~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 237 (440)
T 3zyj_A 174 --------------SYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237 (440)
T ss_dssp --------------CEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred --------------ceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEE
Confidence 1112224556666666666666665 233 255555555555555555555555555555555555
Q ss_pred eeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcc
Q 002010 296 LSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFT 350 (982)
Q Consensus 296 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (982)
|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 238 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 238 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 5555555544445555555555555555555444444444455555555444443
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.3e-28 Score=270.05 Aligned_cols=256 Identities=20% Similarity=0.211 Sum_probs=151.1
Q ss_pred hhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccc--cCccccCCCcccEEEeccccccccCCccccCccccceeec
Q 002010 315 LTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFE--LPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLIL 392 (982)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l 392 (982)
|++|++++|+++...+..|..+++|++|++++|.++.. .+..+..+++|++|++++|.++ .+|..+..+++|++|++
T Consensus 30 l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l 108 (306)
T 2z66_A 30 ATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 108 (306)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEEC
T ss_pred CCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEEC
Confidence 33333333333322222334444444444444444321 1333334444444444444444 23333444444444444
Q ss_pred ccccccccCC-ccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCC-
Q 002010 393 MQNFFIGPIP-EELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITG- 470 (982)
Q Consensus 393 ~~N~~~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~- 470 (982)
++|.+.+..+ ..+..+++|++|++++|.+++..+..+..+++|++ |++++|++++
T Consensus 109 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-----------------------L~l~~n~l~~~ 165 (306)
T 2z66_A 109 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV-----------------------LKMAGNSFQEN 165 (306)
T ss_dssp TTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE-----------------------EECTTCEEGGG
T ss_pred CCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE-----------------------EECCCCccccc
Confidence 4444443333 34555555666666666555544444444444444 4444444433
Q ss_pred CCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCccccc
Q 002010 471 KIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISK 550 (982)
Q Consensus 471 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 550 (982)
..|..+..+++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 35566677777777777777777666777777788888888888887766777888888888888888888888888888
Q ss_pred cc-ccceEEcccccccccCc--cccccccccceecccCCccccCCCC
Q 002010 551 LI-DLSILNLSRNGITGSIP--NEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 551 l~-~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
++ +|+.|+|++|.+++..+ .....+...+.+.+..|.+.+..|.
T Consensus 246 ~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp CCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 84 88888888888876432 1234455666677777777777764
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.4e-28 Score=267.06 Aligned_cols=234 Identities=17% Similarity=0.218 Sum_probs=198.7
Q ss_pred CCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEE
Q 002010 336 FPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIR 415 (982)
Q Consensus 336 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~ 415 (982)
.++++.|++++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+. .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 357888888888888 67777888888888888888888 77888888888888888888877 6677788888888888
Q ss_pred ccCCccCCCCCccccCCCccccccCCCccccccCCccc-ccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccC
Q 002010 416 FSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKM-SGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEG 494 (982)
Q Consensus 416 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 494 (982)
+++|++.+.+|..+.... + +..+ ...+|++|++++|+++ .+|..++.+++|++|+|++|++++
T Consensus 157 L~~n~~~~~~p~~~~~~~-----------~----~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLASTD-----------A----SGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEEC----------------CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhcc-----------c----hhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 888777777776655311 0 0111 1367999999999998 788889999999999999999994
Q ss_pred CCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCcccccc
Q 002010 495 EIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRN 574 (982)
Q Consensus 495 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 574 (982)
+|..+..+++|++|+|++|++.+.+|..++.+++|+.|+|++|.+.+.+|..+.++++|+.|+|++|++.+.+|..+..
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 6778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceecccCCccc
Q 002010 575 MMSLTTLDLSYNNLI 589 (982)
Q Consensus 575 l~~L~~L~Ls~N~l~ 589 (982)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 999999999987664
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.9e-29 Score=277.23 Aligned_cols=255 Identities=21% Similarity=0.176 Sum_probs=152.4
Q ss_pred ccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccc-cccchhhh------hcCCCccEEeccCccccCCCchh
Q 002010 91 IGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQ-GNFAGQIV------RGMTELQVLDAYNNNFTGPLPVE 163 (982)
Q Consensus 91 i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~-~~~~~~~~------~~l~~L~~L~Ls~n~l~~~~p~~ 163 (982)
.+..++|++|++++|++ .+|..+... |++|+|++|.+. ..++.... .++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34556777778888877 677766655 777777777774 33333221 14666666666666666666665
Q ss_pred c--cccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCC
Q 002010 164 I--ASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALT 241 (982)
Q Consensus 164 l--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~ 241 (982)
+ +.+++|++|+|++|++++. |..++.+ .. ..++
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l------------------------~~--------------------~~~~ 149 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAEL------------------------QQ--------------------WLKP 149 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHH------------------------HT--------------------TCCT
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHH------------------------HH--------------------hhcC
Confidence 4 5666666666666666644 4444333 10 0124
Q ss_pred CCCEEecccCcCcccCchhhcCCCccceeecccccCCCC--CCccc--cCCCCCCEEEeeCCcccCc---Cchhhhcccc
Q 002010 242 QLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGH--IPPQL--SGLISLKSLDLSLNYLTGE---IPESFAALKN 314 (982)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~l--~~l~~L~~L~Ls~N~l~~~---~~~~l~~l~~ 314 (982)
+|++|+|++|++++..|..|+++++|++|++++|++.+. .+..+ ..+++|++|+|++|++++. ....+..+++
T Consensus 150 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 229 (312)
T 1wwl_A 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ 229 (312)
T ss_dssp TCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCC
T ss_pred CCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCC
Confidence 555566666666555555566666666666666665443 12222 5566666666666666521 1123345566
Q ss_pred hhhhhhccCCCCCCCC-CcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecc
Q 002010 315 LTLLQLFKNNLRGPIP-SFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILM 393 (982)
Q Consensus 315 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~ 393 (982)
|++|++++|++++.+| ..+..+++|++|++++|.++ .+|..+. ++|++|++++|++++. |. +..+++|++|+++
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~ 304 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLK 304 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECT
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEecc
Confidence 6666666666666553 34555667777777777776 4555554 6677777777777654 44 6677777777777
Q ss_pred cccccc
Q 002010 394 QNFFIG 399 (982)
Q Consensus 394 ~N~~~~ 399 (982)
+|.+++
T Consensus 305 ~N~l~~ 310 (312)
T 1wwl_A 305 GNPFLD 310 (312)
T ss_dssp TCTTTC
T ss_pred CCCCCC
Confidence 777654
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.9e-28 Score=272.99 Aligned_cols=276 Identities=19% Similarity=0.191 Sum_probs=197.8
Q ss_pred CccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhc
Q 002010 145 ELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIG 224 (982)
Q Consensus 145 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~ 224 (982)
.....++++|+++ .+|..+. ++|++|+|++|++++..+..|+++++|++|++++|.+.+
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------------------ 90 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT------------------ 90 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE------------------
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc------------------
Confidence 3344566666666 4565554 367777777777776555567777777777777665542
Q ss_pred ccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCC-ccccCCCCCCEEEeeCC-ccc
Q 002010 225 YFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIP-PQLSGLISLKSLDLSLN-YLT 302 (982)
Q Consensus 225 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N-~l~ 302 (982)
..|..|+++++|++|++++|++++..+..|+++++|++|++++|++++..+ ..+..+++|++|++++| .++
T Consensus 91 -------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 91 -------IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp -------ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred -------cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc
Confidence 223456677788888888888886555568888888888888888885444 46788888888888888 466
Q ss_pred CcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCcccc
Q 002010 303 GEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLC 382 (982)
Q Consensus 303 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 382 (982)
+..+..|..+++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|++++..+..+.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc
Confidence 66677788888888888888888888888888888888888888888754444455678888888888888876554443
Q ss_pred ---Cccccceeecccccccc----cCCccccCCCCCCEEEccCCccCCCCCcc-ccCCCccccccCCCccccccC
Q 002010 383 ---KGGKLKSLILMQNFFIG----PIPEELGQCKSLTKIRFSKNYLNGTIPAG-LFNLPLLNMMELDDNLLSGEL 449 (982)
Q Consensus 383 ---~~~~L~~L~l~~N~~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~ 449 (982)
....++.++++++.+.+ .+|..+..+++|++|++++|+++ .+|.. |..+++|++|++++|.+.+..
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 24556677777776654 35677888888888888888888 55555 467777777777777776544
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=6.5e-28 Score=279.65 Aligned_cols=253 Identities=23% Similarity=0.285 Sum_probs=159.3
Q ss_pred CCCCc--cceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccc
Q 002010 57 SAHCS--FSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGN 134 (982)
Q Consensus 57 ~~~C~--w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 134 (982)
.|.|. |..|.|...+ ...+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++.
T Consensus 49 ~C~C~~~~~~v~c~~~~------------l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~ 114 (452)
T 3zyi_A 49 VCSCSNQFSKVVCTRRG------------LSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQI 114 (452)
T ss_dssp TSEECSSSCEEECCSSC------------CSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCEECCCCcEEEECCCC------------cCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCc
Confidence 34464 5677776432 224665544 6889999999999988888888888888888888888753
Q ss_pred cchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhh
Q 002010 135 FAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSR 214 (982)
Q Consensus 135 ~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~ 214 (982)
+...+.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|.++++|++|++++|...
T Consensus 115 -~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l--------- 184 (452)
T 3zyi_A 115 -EVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKL--------- 184 (452)
T ss_dssp -CTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC---------
T ss_pred -ChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCc---------
Confidence 3455677888888888888888666666777888888888888877665666666666666666653221
Q ss_pred hhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEE
Q 002010 215 LKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSL 294 (982)
Q Consensus 215 l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 294 (982)
....+..|.++++|++|+|++|++++. | .+..+++|++|+|++|++++..|..|.++++|+.|
T Consensus 185 ---------------~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 185 ---------------EYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp ---------------CEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred ---------------cccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 111122355566666666666666533 2 35555555555555555555555555555555555
Q ss_pred EeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcc
Q 002010 295 DLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFT 350 (982)
Q Consensus 295 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (982)
+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 248 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 248 WVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred EeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 55555555555555555555555555555555444444455555555555555443
No 310
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-30 Score=304.48 Aligned_cols=237 Identities=18% Similarity=0.159 Sum_probs=136.8
Q ss_pred CCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCE
Q 002010 334 GDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTK 413 (982)
Q Consensus 334 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~ 413 (982)
..+++|+.|+|++|.+++..|..+..+++|++|+|++|.+++..| +..+++|++|++++|.+.+..+ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 345578888888888887777778888888888888888876554 6677777777777777664332 266777
Q ss_pred EEccCCccCCCCCccccCCCccccccCCCccccccCCccccc-CCccEEEeeccccCCCCchhcc-CCCCcceeeecccc
Q 002010 414 IRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSG-ASLNQLKVANNNITGKIPAAIG-NLPSLNILSLQNNR 491 (982)
Q Consensus 414 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~L~~N~i~~~~p~~~~-~l~~L~~L~L~~N~ 491 (982)
|++++|.+++..+.. +++|+.|++++|.+++..|..+.. ++|+.|+|++|++++.+|..+. .+++|+.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 777777776544432 345555555555555554444332 4555555555555555554443 45555555555555
Q ss_pred ccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccccccc-ccCcc
Q 002010 492 LEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGIT-GSIPN 570 (982)
Q Consensus 492 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~ 570 (982)
|++. | ....+++|++|+|++|+|++. |..+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|.++ +.+|.
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccc-c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 5533 1 122355555555555555532 2235555555555555555552 4444555555555555555554 44444
Q ss_pred ccccccccceeccc
Q 002010 571 EMRNMMSLTTLDLS 584 (982)
Q Consensus 571 ~l~~l~~L~~L~Ls 584 (982)
.+..++.|+.++++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 55555555555443
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.6e-29 Score=272.89 Aligned_cols=204 Identities=23% Similarity=0.291 Sum_probs=130.5
Q ss_pred CCcccEEEeccccccccCCccc--cCccccceeecccccccccCCccccCC-----CCCCEEEccCCccCCCCCccccCC
Q 002010 360 NGKLLILDVTSNHLTGTIPRDL--CKGGKLKSLILMQNFFIGPIPEELGQC-----KSLTKIRFSKNYLNGTIPAGLFNL 432 (982)
Q Consensus 360 l~~L~~L~L~~N~l~~~~p~~~--~~~~~L~~L~l~~N~~~~~~~~~l~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l 432 (982)
+++|++|++++|++++.+|..+ ..+++|++|++++|.+.+. |..++.+ ++|++|++++|++++..|..+..+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4445555555555554444443 4445555555555555444 4444444 667777777777766555666666
Q ss_pred CccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhc--cCCCCcceeeeccccccC--CCc-cccccccccc
Q 002010 433 PLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAI--GNLPSLNILSLQNNRLEG--EIP-VESFNLKMIT 507 (982)
Q Consensus 433 ~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~--~~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~ 507 (982)
++|++|++++|++.+.++ .|..+ +.+++|++|+|++|++++ .++ ..+..+++|+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 231 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERG---------------------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQ 231 (312)
T ss_dssp SSCCEEECCSCTTCHHHH---------------------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCS
T ss_pred CCCCEEECCCCCcCcchH---------------------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCC
Confidence 655555555555432210 12222 567777777777777762 122 2234567788
Q ss_pred eeeeeccccCCCCC-cccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCC
Q 002010 508 SINISDNNISGEIP-YSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYN 586 (982)
Q Consensus 508 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 586 (982)
+|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|
T Consensus 232 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N 306 (312)
T 1wwl_A 232 GLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGN 306 (312)
T ss_dssp EEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTC
T ss_pred EEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCC
Confidence 88888888877664 45566788888888888887 7777776 7888888888888865 55 888888999999998
Q ss_pred cccc
Q 002010 587 NLIG 590 (982)
Q Consensus 587 ~l~~ 590 (982)
++++
T Consensus 307 ~l~~ 310 (312)
T 1wwl_A 307 PFLD 310 (312)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8875
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=272.54 Aligned_cols=249 Identities=19% Similarity=0.218 Sum_probs=170.3
Q ss_pred hhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccc
Q 002010 315 LTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQ 394 (982)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~ 394 (982)
.+.++.+++.++ .+|..+. ++++.|+|++|+++...+..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 344556666666 4554443 4566666666666665566666666666666666666655555555555555555555
Q ss_pred ccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeec-cccCCCCc
Q 002010 395 NFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVAN-NNITGKIP 473 (982)
Q Consensus 395 N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~-N~i~~~~p 473 (982)
|.+++..+..|..+++|++|+|++|++++..+..|..++ +|++|++++ |.+....+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-----------------------~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP-----------------------SLRRLDLGELKRLSYISE 178 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCT-----------------------TCCEEECCCCTTCCEECT
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCc-----------------------ccCEeCCCCCCCcceeCc
Confidence 555555555555555555555555555543333444444 455555555 33333444
Q ss_pred hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccc
Q 002010 474 AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLID 553 (982)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 553 (982)
..|.++++|++|+|++|+++ .+| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred chhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCC
Confidence 56778888888888888887 455 4777888888888888888877888888888888888888888888888888888
Q ss_pred cceEEcccccccccCccccccccccceecccCCccccC
Q 002010 554 LSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGN 591 (982)
Q Consensus 554 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 591 (982)
|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 88888888888877777788888888888888887654
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.1e-27 Score=259.69 Aligned_cols=251 Identities=18% Similarity=0.153 Sum_probs=160.0
Q ss_pred cEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCC
Q 002010 340 EVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKN 419 (982)
Q Consensus 340 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N 419 (982)
+.++.+++.++. +|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+.+..|..+..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 456666666663 34322 346666666666666555555666666666666666666655666666666666666666
Q ss_pred c-cCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCcc
Q 002010 420 Y-LNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPV 498 (982)
Q Consensus 420 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 498 (982)
+ +++..|..+..++ +|++|++++|++++..|..|..+++|++|++++|++++..+.
T Consensus 91 ~~l~~~~~~~~~~l~-----------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 91 AQLRSVDPATFHGLG-----------------------RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp TTCCCCCTTTTTTCT-----------------------TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCccccCHHHhcCCc-----------------------CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh
Confidence 5 5544455555554 455555555555555566667777777777777777755555
Q ss_pred ccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCcccccccccc
Q 002010 499 ESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSL 578 (982)
Q Consensus 499 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 578 (982)
.+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..+..+++|
T Consensus 148 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 56677777777777777776555567777777777777777777777777777777777777777776666667777777
Q ss_pred ceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 579 TTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 579 ~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
++|++++|++.+..+....+..+.......|...|..|
T Consensus 228 ~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp CEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred CEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 77777777777655532222223333344555555444
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.5e-27 Score=273.52 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=176.1
Q ss_pred hhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccc
Q 002010 315 LTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQ 394 (982)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~ 394 (982)
...++.+++.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 344566666666 4554433 4667777777777766666666677777777777776666666666666666666666
Q ss_pred ccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeec-cccCCCCc
Q 002010 395 NFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVAN-NNITGKIP 473 (982)
Q Consensus 395 N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~-N~i~~~~p 473 (982)
|.+++..+..|..+++|++|+|++|++++..+..|..+++| ++|++++ |.+....+
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-----------------------~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL-----------------------MRLDLGELKKLEYISE 189 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTC-----------------------CEEECCCCTTCCEECT
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcc-----------------------cEEeCCCCCCccccCh
Confidence 66665555556666666666666666664444455555544 4455554 33333344
Q ss_pred hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccc
Q 002010 474 AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLID 553 (982)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 553 (982)
..|.++++|++|+|++|++++ +| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 467788888888888888874 44 4777888888888888888888888888888888888888888888888888888
Q ss_pred cceEEcccccccccCccccccccccceecccCCccccCC
Q 002010 554 LSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNI 592 (982)
Q Consensus 554 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 592 (982)
|+.|+|++|+|++..+..|..+++|+.|+|++|++....
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 888888888888777777888888888888888876543
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=6.7e-27 Score=277.71 Aligned_cols=268 Identities=27% Similarity=0.385 Sum_probs=156.9
Q ss_pred CCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhc
Q 002010 242 QLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLF 321 (982)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 321 (982)
+++.|++++|+++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 5778888888887 6666554 67888888888887 3444 45778888888888773 443 45677777777
Q ss_pred cCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccC
Q 002010 322 KNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPI 401 (982)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~ 401 (982)
+|++++ +|. .+++|+.|++++|+++. +|.. +++|++|++++|++++ +|.
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---------------------- 158 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---------------------- 158 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC----------------------
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC----------------------
Confidence 777764 333 45666777777776664 3332 2556666666665552 222
Q ss_pred CccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCC
Q 002010 402 PEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPS 481 (982)
Q Consensus 402 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~ 481 (982)
.+.+|+.|++++|++++ +| ..+++|+.|++++|.+++. |.. ..+|+.|++++|+++. +|. .+++
T Consensus 159 -----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~~--~~~L~~L~L~~N~l~~-l~~---~~~~ 222 (622)
T 3g06_A 159 -----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-PTL--PSELYKLWAYNNRLTS-LPA---LPSG 222 (622)
T ss_dssp -----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CCC--CTTCCEEECCSSCCSS-CCC---CCTT
T ss_pred -----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-CCc--cchhhEEECcCCcccc-cCC---CCCC
Confidence 12344455555555542 23 2233344444444444431 111 1355666666666652 332 2356
Q ss_pred cceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccc
Q 002010 482 LNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSR 561 (982)
Q Consensus 482 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 561 (982)
|+.|++++|+|++ +| ..+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++
T Consensus 223 L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 223 LKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 6666666666663 44 33456666666666666 3443 4566666666666666 5566666666666666666
Q ss_pred ccccccCcccccccc
Q 002010 562 NGITGSIPNEMRNMM 576 (982)
Q Consensus 562 N~l~~~~p~~l~~l~ 576 (982)
|++++.+|..+..++
T Consensus 294 N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 294 NPLSERTLQALREIT 308 (622)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHhcc
Confidence 666666666555544
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.8e-27 Score=258.00 Aligned_cols=252 Identities=17% Similarity=0.138 Sum_probs=133.5
Q ss_pred CEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccc
Q 002010 292 KSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSN 371 (982)
Q Consensus 292 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 371 (982)
+.++.+++.++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..|..+..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666666 344332 245566666666665555555555556666666555555544555555555555555555
Q ss_pred c-ccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCC
Q 002010 372 H-LTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELP 450 (982)
Q Consensus 372 ~-l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 450 (982)
. ++ ...|..+..+++|++|++++|++++..|..+..+++|++|++++|.++
T Consensus 91 ~~l~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---- 142 (285)
T 1ozn_A 91 AQLR------------------------SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ---- 142 (285)
T ss_dssp TTCC------------------------CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC----
T ss_pred CCcc------------------------ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc----
Confidence 4 44 333455555566666666666665544544544444433333333333
Q ss_pred cccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCC
Q 002010 451 EKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSL 530 (982)
Q Consensus 451 ~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 530 (982)
+..+..|+.+++|++|++++|++++..+..+..+++|++|++++|++++..|..|..+++|
T Consensus 143 -------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 203 (285)
T 1ozn_A 143 -------------------ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203 (285)
T ss_dssp -------------------CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred -------------------ccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccc
Confidence 2333334445555555555555553333345555555555555555555555556666666
Q ss_pred CeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCC
Q 002010 531 TSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 531 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
+.|+|++|.+++..+..+..+++|+.|+|++|.++...+. ..-...++.+..+.|.+.+..|.
T Consensus 204 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESG
T ss_pred cEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCch
Confidence 6666666666654445566666666666666666533221 11223344555566666666654
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=8.8e-29 Score=272.56 Aligned_cols=263 Identities=18% Similarity=0.156 Sum_probs=165.2
Q ss_pred EeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEecccccc
Q 002010 295 DLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLT 374 (982)
Q Consensus 295 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 374 (982)
+++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|++++|.+++..+ +..+++|++|++++|+++
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~ 93 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccc
Confidence 344444433333333334444444444444444444444445555555555555543322 444455555555555544
Q ss_pred ccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccc
Q 002010 375 GTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMS 454 (982)
Q Consensus 375 ~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 454 (982)
+.. ..++|++|++++|.+.+..+.. +++|++|++++|++++..+..+..++
T Consensus 94 ~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~--------------------- 144 (317)
T 3o53_A 94 ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRS--------------------- 144 (317)
T ss_dssp EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGS---------------------
T ss_pred ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccC---------------------
Confidence 211 1134444444444444333322 34566666666666544444444444
Q ss_pred cCCccEEEeeccccCCCCchhc-cCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCee
Q 002010 455 GASLNQLKVANNNITGKIPAAI-GNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSV 533 (982)
Q Consensus 455 ~~~L~~L~L~~N~i~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 533 (982)
+|++|++++|++++..+..+ ..+++|++|+|++|++++. |. ...+++|++|+|++|+|++ +|..+..+++|+.|
T Consensus 145 --~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L 219 (317)
T 3o53_A 145 --RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWI 219 (317)
T ss_dssp --SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEE
T ss_pred --CCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEE
Confidence 45555555555555555555 3678888888888888744 32 3348889999999999985 45568999999999
Q ss_pred eCCCCcccCCCCcccccccccceEEccccccc-ccCccccccccccceecccC-CccccCCCC
Q 002010 534 DLSRNSLYGKIPPGISKLIDLSILNLSRNGIT-GSIPNEMRNMMSLTTLDLSY-NNLIGNIPS 594 (982)
Q Consensus 534 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~-N~l~~~ip~ 594 (982)
+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++ +.++|..|.
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999998 57888999999999999999999 78889999999999999994 567776664
No 318
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=8.6e-30 Score=307.04 Aligned_cols=460 Identities=16% Similarity=0.129 Sum_probs=225.2
Q ss_pred CCccceeeeCCCCCEEEEEeccCCccccCCc-CccccccccEEEeccCCCCC---CCC------------hhhhhhcccc
Q 002010 59 HCSFSGVTCDQDSRVVSLNVSFMPLFGSIPP-EIGLLTKLVNLTISNVNLTG---RLP------------SEMALLTSLK 122 (982)
Q Consensus 59 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~-~i~~l~~L~~L~l~~n~l~~---~~p------------~~l~~l~~L~ 122 (982)
|++|.++... ....+++... .+..|. .+..+++|++|+++++.... ..| .....+++|+
T Consensus 34 ck~W~~~~~~---~~~~l~~~~~--~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIERW---CRRKVFIGNC--YAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHHH---HCCEEEESST--TSSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhhh---hceEEeeccc--cccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 4589988321 1223444332 122222 24556778888888764221 111 1234566777
Q ss_pred eeeccCCccccccchhhhhcCCCccEEeccCc-cccCC-CchhccccccccEEeecCcccccccCCCcc----ccCcceE
Q 002010 123 VFNISGNVFQGNFAGQIVRGMTELQVLDAYNN-NFTGP-LPVEIASLKSLRHLSFGGNYFTGKIPQSYS----EIQSLEY 196 (982)
Q Consensus 123 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n-~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~ 196 (982)
+|+|++|.+.+..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 77777777665555444445677777777776 44432 334444677777777777776655544443 3456666
Q ss_pred eeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccC-cCcccCchhhcCCCccceeecccc
Q 002010 197 IGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASC-NISGEIPTSLSRLKLLHSLFLQMN 275 (982)
Q Consensus 197 L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~N 275 (982)
|++++|. .......+..+ +..+++|++|++++| .+.+ ++..+.++++|++|+++.+
T Consensus 189 L~l~~~~-~~~~~~~l~~l---------------------~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 189 LNISCLA-SEVSFSALERL---------------------VTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp EECTTCC-SCCCHHHHHHH---------------------HHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBC
T ss_pred EEecccC-CcCCHHHHHHH---------------------HHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccc
Confidence 6666654 11111111111 112456666666666 3333 5555666666666664333
Q ss_pred -------cCCCCCCccccCCCCCCEE-EeeCCcccCcCchhhhcccchhhhhhccCCCCCCC-CCcCCCCCCccEEEccC
Q 002010 276 -------KLTGHIPPQLSGLISLKSL-DLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPI-PSFLGDFPNLEVLQVWG 346 (982)
Q Consensus 276 -------~l~~~~~~~l~~l~~L~~L-~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~ 346 (982)
.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|+|++|.+++.. +..+..+++|+.|++++
T Consensus 246 ~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~ 323 (594)
T 2p1m_B 246 TAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLD 323 (594)
T ss_dssp CCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEG
T ss_pred cCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcC
Confidence 2222 22244455555555 2222211 122333333444444444444433211 11123344444444444
Q ss_pred CCcccc-cCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCcccc-CCCCCCEEEccCCccCCC
Q 002010 347 NNFTFE-LPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELG-QCKSLTKIRFSKNYLNGT 424 (982)
Q Consensus 347 N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~-~l~~L~~L~Ls~N~l~~~ 424 (982)
| ++.. ++.....+++|+.|+++++.-.| ....+.+++.....+. .+++|++|+++.|.+++.
T Consensus 324 ~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g---------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~ 387 (594)
T 2p1m_B 324 Y-IEDAGLEVLASTCKDLRELRVFPSEPFV---------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNA 387 (594)
T ss_dssp G-GHHHHHHHHHHHCTTCCEEEEECSCTTC---------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHH
T ss_pred c-cCHHHHHHHHHhCCCCCEEEEecCcccc---------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHH
Confidence 4 2211 11111123334444332210000 0011222221111121 244555555544444432
Q ss_pred CCcccc-CCCccccccCCCccccccCCcccccCCccEEEee--c----cccCC-----CCchhccCCCCcceeeeccccc
Q 002010 425 IPAGLF-NLPLLNMMELDDNLLSGELPEKMSGASLNQLKVA--N----NNITG-----KIPAAIGNLPSLNILSLQNNRL 492 (982)
Q Consensus 425 ~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~--~----N~i~~-----~~p~~~~~l~~L~~L~L~~N~l 492 (982)
.+..+. .++ +|+.|+++ + |++++ .++..+..+++|+.|++++ .+
T Consensus 388 ~~~~l~~~~~-----------------------~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l 443 (594)
T 2p1m_B 388 ALITIARNRP-----------------------NMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LL 443 (594)
T ss_dssp HHHHHHHHCT-----------------------TCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SC
T ss_pred HHHHHHhhCC-----------------------CcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cc
Confidence 222221 122 34444444 2 33331 1222355677777888766 55
Q ss_pred cCCCcccccc-ccccceeeeeccccCCCCCccc-ccccCCCeeeCCCCcccCCCCc-ccccccccceEEcccccccccCc
Q 002010 493 EGEIPVESFN-LKMITSINISDNNISGEIPYSI-SQCHSLTSVDLSRNSLYGKIPP-GISKLIDLSILNLSRNGITGSIP 569 (982)
Q Consensus 493 ~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p 569 (982)
++..+..+.. +++|++|+|++|.+++..+..+ .++++|+.|+|++|.+++..+. .+..+++|+.|++++|+++..-.
T Consensus 444 ~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 523 (594)
T 2p1m_B 444 TDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGAC 523 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHH
T ss_pred cHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHH
Confidence 5444444444 6778888888887765544444 5678888888888887654443 34557888888888888754433
Q ss_pred ccc-ccccccceecccCCcc
Q 002010 570 NEM-RNMMSLTTLDLSYNNL 588 (982)
Q Consensus 570 ~~l-~~l~~L~~L~Ls~N~l 588 (982)
..+ ..+++|+...+..+.-
T Consensus 524 ~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 524 KLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHhCCCCEEEEecCCCc
Confidence 334 4567776666665543
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.5e-26 Score=272.77 Aligned_cols=269 Identities=25% Similarity=0.343 Sum_probs=207.4
Q ss_pred hhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEE
Q 002010 216 KNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLD 295 (982)
Q Consensus 216 ~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 295 (982)
.+++.|+++. +.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~-n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGE-SGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCS-SCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecC-CCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 3578888885 3444 7787776 89999999999999 4555 57899999999999994 554 679999999
Q ss_pred eeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccc
Q 002010 296 LSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTG 375 (982)
Q Consensus 296 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 375 (982)
|++|.+++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|.+++ +|. ...+|+.|++++|++++
T Consensus 108 Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~ 175 (622)
T 3g06_A 108 IFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS 175 (622)
T ss_dssp ECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC
Confidence 99999995 444 56889999999999995 5553 4899999999999985 443 34678999999999984
Q ss_pred cCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCccccc
Q 002010 376 TIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSG 455 (982)
Q Consensus 376 ~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 455 (982)
+| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++ .+| .. .
T Consensus 176 -l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~------------------------~~--~ 220 (622)
T 3g06_A 176 -LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLP------------------------AL--P 220 (622)
T ss_dssp -CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCC------------------------CC--C
T ss_pred -Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccC------------------------CC--C
Confidence 44 334556666666666553 2221 245555555555555 222 11 1
Q ss_pred CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeC
Q 002010 456 ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDL 535 (982)
Q Consensus 456 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (982)
.+|+.|++++|+|++ +| ..+++|+.|++++|+|+ .+|. .+++|++|+|++|+|+ .+|..|.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 467888888888875 44 45688999999999998 5665 6788999999999999 77889999999999999
Q ss_pred CCCcccCCCCccccccc
Q 002010 536 SRNSLYGKIPPGISKLI 552 (982)
Q Consensus 536 s~N~l~~~~p~~~~~l~ 552 (982)
++|.+++.+|..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999999888887766
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.2e-30 Score=309.77 Aligned_cols=418 Identities=17% Similarity=0.144 Sum_probs=256.8
Q ss_pred CCEEEEEeccCCcccc---CCcC------------ccccccccEEEeccCCCCCCCChhhh-hhcccceeeccCC-cccc
Q 002010 71 SRVVSLNVSFMPLFGS---IPPE------------IGLLTKLVNLTISNVNLTGRLPSEMA-LLTSLKVFNISGN-VFQG 133 (982)
Q Consensus 71 ~~v~~l~l~~~~l~g~---~~~~------------i~~l~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L~Ls~n-~l~~ 133 (982)
.++..+++.+...... .|.. ...+++|++|+|++|.+++..+..+. .+++|++|+|++| .+.+
T Consensus 66 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 145 (594)
T 2p1m_B 66 PKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFST 145 (594)
T ss_dssp TTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEH
T ss_pred CCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCH
Confidence 4577888887653322 1211 24578999999999999988777776 7999999999999 5554
Q ss_pred ccchhhhhcCCCccEEeccCccccCCCchhcc----ccccccEEeecCcc--cccc-cCCCccccCcceEeeccCccccc
Q 002010 134 NFAGQIVRGMTELQVLDAYNNNFTGPLPVEIA----SLKSLRHLSFGGNY--FTGK-IPQSYSEIQSLEYIGLNGIGLNG 206 (982)
Q Consensus 134 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~----~l~~L~~L~L~~N~--l~~~-~p~~~~~l~~L~~L~L~~n~i~~ 206 (982)
.....+..++++|++|+|++|.+++..+..+. .+++|++|+|++|. ++.. ++..+..+++|++|++++|...+
T Consensus 146 ~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~ 225 (594)
T 2p1m_B 146 DGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE 225 (594)
T ss_dssp HHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH
T ss_pred HHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH
Confidence 44456667899999999999999877666655 66799999999997 3322 12223457999999999873222
Q ss_pred chhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEe-------cccCcCcccCchhhcCCCcccee-ecccccCC
Q 002010 207 TVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLD-------MASCNISGEIPTSLSRLKLLHSL-FLQMNKLT 278 (982)
Q Consensus 207 ~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~-------L~~n~l~~~~~~~l~~l~~L~~L-~L~~N~l~ 278 (982)
.++..+.++ ++|+.|+ +..+.+.+ ++..+.++++|+.| .+.+...
T Consensus 226 ~l~~~~~~~-------------------------~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~- 278 (594)
T 2p1m_B 226 KLATLLQRA-------------------------PQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP- 278 (594)
T ss_dssp HHHHHHHHC-------------------------TTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-
T ss_pred HHHHHHhcC-------------------------CcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-
Confidence 244444444 4555555 44455554 44578999999999 4544333
Q ss_pred CCCCccccCCCCCCEEEeeCCcccCcCc-hhhhcccchhhhhhccCCCCCC-CCCcCCCCCCccEEEccC---------C
Q 002010 279 GHIPPQLSGLISLKSLDLSLNYLTGEIP-ESFAALKNLTLLQLFKNNLRGP-IPSFLGDFPNLEVLQVWG---------N 347 (982)
Q Consensus 279 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~---------N 347 (982)
+.++..+..+++|++|+|++|.+++... ..+..+++|+.|++++| +.+. ++.....+++|+.|++++ +
T Consensus 279 ~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~ 357 (594)
T 2p1m_B 279 AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNV 357 (594)
T ss_dssp GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSS
T ss_pred hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCC
Confidence 2445555578999999999999875433 33568899999999988 4422 222334588999999954 3
Q ss_pred CcccccCcccc-CCCcccEEEeccccccccCCccccCccccceeecccccccccCCcccc-CCCCCCEEEcc--C----C
Q 002010 348 NFTFELPENLG-RNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELG-QCKSLTKIRFS--K----N 419 (982)
Q Consensus 348 ~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~-~l~~L~~L~Ls--~----N 419 (982)
.++......+. .+++|+.|+++.|.+++.. ...+. .+++|+.|+++ + |
T Consensus 358 ~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~------------------------~~~l~~~~~~L~~L~L~~~~~~~~~ 413 (594)
T 2p1m_B 358 ALTEQGLVSVSMGCPKLESVLYFCRQMTNAA------------------------LITIARNRPNMTRFRLCIIEPKAPD 413 (594)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEEESCCCHHH------------------------HHHHHHHCTTCCEEEEEESSTTCCC
T ss_pred CCCHHHHHHHHHhchhHHHHHHhcCCcCHHH------------------------HHHHHhhCCCcceeEeecccCCCcc
Confidence 44432222222 2455555555555555433 33332 35566666666 2 2
Q ss_pred ccCCCCC-----ccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccC-CCCcceeeecccccc
Q 002010 420 YLNGTIP-----AGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGN-LPSLNILSLQNNRLE 493 (982)
Q Consensus 420 ~l~~~~p-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~-l~~L~~L~L~~N~l~ 493 (982)
.+++... ..+..+ ++|+.|++++ ++++..+..+.. +++|+.|+|++|.++
T Consensus 414 ~l~~~~~~~~~~~l~~~~-----------------------~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 414 YLTLEPLDIGFGAIVEHC-----------------------KDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp TTTCCCTHHHHHHHHHHC-----------------------TTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSS
T ss_pred cccCCchhhHHHHHHhhC-----------------------CCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCc
Confidence 3321100 001122 2444455544 344333344443 566666666666665
Q ss_pred CCCcccc-ccccccceeeeeccccCCCCCc-ccccccCCCeeeCCCCcccCCCCccc-ccccccceEEcccccc
Q 002010 494 GEIPVES-FNLKMITSINISDNNISGEIPY-SISQCHSLTSVDLSRNSLYGKIPPGI-SKLIDLSILNLSRNGI 564 (982)
Q Consensus 494 ~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l 564 (982)
+..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++|.++......+ ..+++|+...+..+.-
T Consensus 470 ~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 470 DLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 4333333 4466667777777766533332 23456777777777777643333333 4556666666665543
No 321
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.9e-28 Score=268.37 Aligned_cols=268 Identities=18% Similarity=0.168 Sum_probs=163.0
Q ss_pred CCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhc
Q 002010 242 QLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLF 321 (982)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 321 (982)
+++.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 35556666666665554555566667777777777776666666777777777777777765443 6666666666666
Q ss_pred cCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccC
Q 002010 322 KNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPI 401 (982)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~ 401 (982)
+|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|++++|.+.+..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 66666422 2266777777777766544332 455666666666666555556666666666666666666555
Q ss_pred Cccc-cCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCC
Q 002010 402 PEEL-GQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLP 480 (982)
Q Consensus 402 ~~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~ 480 (982)
+..+ ..+++|++|++++|++++. +. ...+ .+|++|++++|++++. |..+..++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l-----------------------~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVF-----------------------AKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCC-----------------------TTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred HHHHhhccCcCCEEECCCCcCccc-cc-cccc-----------------------ccCCEEECCCCcCCcc-hhhhcccC
Confidence 5554 3566666666666666532 11 1123 3455555555555533 33366666
Q ss_pred CcceeeeccccccCCCccccccccccceeeeeccccC-CCCCcccccccCCCeeeCC-CCcccCCCCc
Q 002010 481 SLNILSLQNNRLEGEIPVESFNLKMITSINISDNNIS-GEIPYSISQCHSLTSVDLS-RNSLYGKIPP 546 (982)
Q Consensus 481 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~ 546 (982)
+|+.|++++|+++ .+|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+++ .+.++|..|.
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 6666666666666 45556666666666666666666 5566666666777777766 3345554444
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=8.6e-28 Score=283.71 Aligned_cols=186 Identities=19% Similarity=0.123 Sum_probs=131.0
Q ss_pred ccccccceEEEEE-EeCCCcEEEEEEeccCCCC---------CchhhHHHHHHHHhcC-CCCcccceEeEEEcCCccEEE
Q 002010 699 IIGKGGAGIVYRG-SMPDGIDVAIKRLVGRGTG---------GNDHGFLAEIQTLGRI-RHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 699 ~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~---------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 767 (982)
..+.|+.|.+..+ +.-.|+.||+|++...... ...+++.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777777665 3346889999999654321 1234689999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||++|++|.+++. +.++++.. +|+.||+.||+|+|++| ||||||||+|||++++|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999997 44567654 47899999999999999 999999999999999999999999999876533
Q ss_pred CCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 002010 848 GASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKP 895 (982)
Q Consensus 848 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 895 (982)
.......+||+.|||||++.+ .+..++|+|++|++.+++.++..|
T Consensus 393 --~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 --CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred --CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 223445789999999999876 467789999999998877655433
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=7e-27 Score=272.35 Aligned_cols=222 Identities=21% Similarity=0.218 Sum_probs=188.4
Q ss_pred CCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccc
Q 002010 359 RNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMM 438 (982)
Q Consensus 359 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 438 (982)
.+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| ++.+++|++|+|++|.|++.. ..++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEE
Confidence 34589999999999998888889999999999999999987766 889999999999999998433 23789999
Q ss_pred cCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccc-cccccceeeeeccccC
Q 002010 439 ELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESF-NLKMITSINISDNNIS 517 (982)
Q Consensus 439 ~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~ 517 (982)
++++|.+++..+..+ ++|+.|+|++|++++..|..++.+++|++|+|++|++++.+|..+. .+++|++|+|++|.|+
T Consensus 105 ~L~~N~l~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 105 HAANNNISRVSCSRG--QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp ECCSSCCCCEEECCC--SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred ECcCCcCCCCCcccc--CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999988776543 5799999999999988888899999999999999999988888776 7899999999999998
Q ss_pred CCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccc-cCCC
Q 002010 518 GEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLI-GNIP 593 (982)
Q Consensus 518 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~ip 593 (982)
+..+ +..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++. +.+|
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 6633 3458999999999999986 45558899999999999999985 7777889999999999999987 4444
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.4e-25 Score=239.06 Aligned_cols=219 Identities=21% Similarity=0.267 Sum_probs=170.4
Q ss_pred CCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccc
Q 002010 57 SAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFA 136 (982)
Q Consensus 57 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~ 136 (982)
.++|.|.|+.|+-.+.+..+++++.++. .+|..+. +++++|+|++|++++..+..+..+++|++|+|++|.++ .++
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeC
Confidence 3689999999975555667888888877 4777665 67899999999998777778888999999999998887 455
Q ss_pred hhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhh
Q 002010 137 GQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLK 216 (982)
Q Consensus 137 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~ 216 (982)
..++.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|+.+++|++|++++|.+.+.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~--------- 148 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL--------- 148 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---------
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc---------
Confidence 66677888888888888888876667778888888888888888877777778888888888877665422
Q ss_pred hHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEe
Q 002010 217 NLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDL 296 (982)
Q Consensus 217 ~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 296 (982)
.+..|+.+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 149 ----------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 149 ----------------PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp ----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ----------------CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 1223666777888888888887766667777888888888888887666666777788888888
Q ss_pred eCCcccCc
Q 002010 297 SLNYLTGE 304 (982)
Q Consensus 297 s~N~l~~~ 304 (982)
++|.+...
T Consensus 213 ~~N~~~c~ 220 (270)
T 2o6q_A 213 QENPWDCT 220 (270)
T ss_dssp CSSCBCCS
T ss_pred cCCCeeCC
Confidence 88877643
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=7.6e-25 Score=236.17 Aligned_cols=210 Identities=20% Similarity=0.175 Sum_probs=149.8
Q ss_pred cccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCC
Q 002010 362 KLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELD 441 (982)
Q Consensus 362 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 441 (982)
+|++|++++|++++..+..+.++++|++|++++|.+.+..+..+..+++|++|++++|++++..+..+..+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--------- 99 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL--------- 99 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---------
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC---------
Confidence 45555555555554444455555555555555555554444455555555555555555544433444444
Q ss_pred CccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCC-CccccccccccceeeeeccccCCCC
Q 002010 442 DNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGE-IPVESFNLKMITSINISDNNISGEI 520 (982)
Q Consensus 442 ~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~ 520 (982)
.+|++|++++|++++..+..++.+++|++|++++|++++. +|..+..+++|++|+|++|++++..
T Consensus 100 --------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 100 --------------SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp --------------TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred --------------ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 4566666666666666666788888999999999998763 5888888999999999999998877
Q ss_pred CcccccccCCC----eeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCCC
Q 002010 521 PYSISQCHSLT----SVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG 595 (982)
Q Consensus 521 p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 595 (982)
+..+..+++|+ .|++++|.+++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..
T Consensus 166 ~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp GGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred HHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 78888888887 899999999865555554 458999999999999777777899999999999999999888754
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=2.2e-24 Score=232.55 Aligned_cols=205 Identities=19% Similarity=0.168 Sum_probs=111.9
Q ss_pred ccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEcc
Q 002010 266 LLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVW 345 (982)
Q Consensus 266 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 345 (982)
+|++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------- 95 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGA------------- 95 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT-------------
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhh-------------
Confidence 4555555555555444444555555555555555555444444444444444444444444444444
Q ss_pred CCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccccccccc-CCccccCCCCCCEEEccCCccCCC
Q 002010 346 GNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGP-IPEELGQCKSLTKIRFSKNYLNGT 424 (982)
Q Consensus 346 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~-~~~~l~~l~~L~~L~Ls~N~l~~~ 424 (982)
+..+++|++|++++|++++..+..+..+++|++|++++|.+.+. +|..++.+++|++|++++|++++.
T Consensus 96 -----------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 96 -----------FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp -----------TTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred -----------hcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 44444444444444444444333444555555555555555442 466666666777777777776655
Q ss_pred CCccccCCCccc----cccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccC
Q 002010 425 IPAGLFNLPLLN----MMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEG 494 (982)
Q Consensus 425 ~p~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 494 (982)
.+..+..++.|+ .|++++|.+++..+..+...+|+.|++++|++++..+..|..+++|+.|++++|++++
T Consensus 165 ~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 555555555444 4555555555555544444556666666666665555556666666666666666653
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=9.6e-24 Score=228.51 Aligned_cols=203 Identities=21% Similarity=0.204 Sum_probs=111.5
Q ss_pred ccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccE
Q 002010 381 LCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQ 460 (982)
Q Consensus 381 ~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~ 460 (982)
+.++++++++++++|.++. +|..+. ++++.|+|++|++++..+..|..+++|++|++++|.+++..+. ....+|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~ 81 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGT 81 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCE
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCE
Confidence 4455667777777777663 343332 5677777777777766666666666666666666666643332 22345555
Q ss_pred EEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcc
Q 002010 461 LKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSL 540 (982)
Q Consensus 461 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 540 (982)
|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 555555555 3444555555555555555555544444455555555555555555544444455555555555555555
Q ss_pred cCCCCcccccccccceEEcccccccccCccccccccccceecccCCccc
Q 002010 541 YGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLI 589 (982)
Q Consensus 541 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 589 (982)
++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 5433344455555555555555555 44444444455555555555443
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.6e-23 Score=223.13 Aligned_cols=205 Identities=21% Similarity=0.195 Sum_probs=138.8
Q ss_pred ccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCC
Q 002010 363 LLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDD 442 (982)
Q Consensus 363 L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 442 (982)
.+.+++++|+++ .+|..+. .++++|++++|.+.+..+..|.++++|++|++++|++++..+..|..++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~--------- 85 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELK--------- 85 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCT---------
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCC---------
Confidence 445555555555 3343332 3445555555555544444555555555555555555533333333343
Q ss_pred ccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCc
Q 002010 443 NLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPY 522 (982)
Q Consensus 443 N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 522 (982)
+|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|+|++..+.
T Consensus 86 --------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 86 --------------NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp --------------TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred --------------CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh
Confidence 455555555555555556677778888888888888766666677788888888888888866666
Q ss_pred ccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCC
Q 002010 523 SISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 523 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
.|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++....+
T Consensus 152 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 152 VFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 68888888888888888887667778888888888888888887666678888888888888888876654
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7.2e-25 Score=257.34 Aligned_cols=187 Identities=19% Similarity=0.228 Sum_probs=147.4
Q ss_pred ccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCc-------hhhHHHHHHHHhcCCCCcccceEeEEEcCCccEEE
Q 002010 695 KDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGN-------DHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 695 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 767 (982)
...+.||+|+||.||+|.. .++.+++|+......... .+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4567899999999999955 678899998744322211 23478999999999999999766666677888999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhcccc
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDA 847 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 847 (982)
|||+++++|.+++.. +..++.|+++|++|||+++ |+||||||+||+++. .+||+|||+|+.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999963 5689999999999999998 999999999999998 9999999999877542
Q ss_pred CCcc-----ccccccccccccccccccc--CCCCcchhhHHHHHHHHHHHhCCCCCC
Q 002010 848 GASE-----CMSSVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELIAGKKPVG 897 (982)
Q Consensus 848 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~ 897 (982)
.... ......||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1111 1235679999999999986 668888999999999888888887774
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=4.9e-24 Score=229.04 Aligned_cols=224 Identities=15% Similarity=0.140 Sum_probs=150.8
Q ss_pred ccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceee
Q 002010 312 LKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLI 391 (982)
Q Consensus 312 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ 391 (982)
+.++..+++..+.+.+.. .+..+++|+.|++++|.++. ...+..+++|++|++++|.+++.
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--------------- 78 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--------------- 78 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC---------------
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc---------------
Confidence 456777888888777543 35567788888888888773 23466677777777777776631
Q ss_pred cccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCC
Q 002010 392 LMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGK 471 (982)
Q Consensus 392 l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~ 471 (982)
..+..+++|++|++++|.+++..+..+..+++|++|+ +++|++++.
T Consensus 79 -----------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-----------------------L~~n~l~~~ 124 (272)
T 3rfs_A 79 -----------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV-----------------------LVENQLQSL 124 (272)
T ss_dssp -----------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE-----------------------CTTSCCCCC
T ss_pred -----------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE-----------------------CCCCcCCcc
Confidence 2345556666666666666654444444444333333 333333334
Q ss_pred CchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccc
Q 002010 472 IPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKL 551 (982)
Q Consensus 472 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 551 (982)
.+..|+.+++|++|++++|++++..+..+..+++|++|++++|++++..+..|+.+++|+.|+|++|++++..|..+..+
T Consensus 125 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (272)
T 3rfs_A 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 204 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCC
Confidence 44456666677777777777765555556667777777777777776666667788888888888888887777777888
Q ss_pred cccceEEcccccccccCccccccccccceecccCCccccCCCCC
Q 002010 552 IDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG 595 (982)
Q Consensus 552 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 595 (982)
++|+.|+|++|.+++. +++|++|+++.|.++|.+|..
T Consensus 205 ~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 205 TSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred cCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 8888888888887754 446888888888888888853
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=4.7e-24 Score=229.17 Aligned_cols=225 Identities=21% Similarity=0.216 Sum_probs=108.3
Q ss_pred cccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEee
Q 002010 119 TSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIG 198 (982)
Q Consensus 119 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 198 (982)
..+..++++.+.+.+... ...+++|+.|++++|.++. + ..++.+++|++|+|++|++++. ..++.
T Consensus 19 ~~l~~l~l~~~~~~~~~~---~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~-------- 83 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAVT---QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKE-------- 83 (272)
T ss_dssp HHHHHHHHTCSCTTSEEC---HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTT--------
T ss_pred HHHHHHHhcCcccccccc---cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcC--------
Confidence 344455555555543322 2345566666666666552 2 2456666666666666665531 13333
Q ss_pred ccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCC
Q 002010 199 LNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLT 278 (982)
Q Consensus 199 L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 278 (982)
+++|++|++++|++++..+..|.++++|++|++++|+++
T Consensus 84 -----------------------------------------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 122 (272)
T 3rfs_A 84 -----------------------------------------LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ 122 (272)
T ss_dssp -----------------------------------------CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred -----------------------------------------CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCC
Confidence 344444444444444444444444444444444444444
Q ss_pred CCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCcccc
Q 002010 279 GHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLG 358 (982)
Q Consensus 279 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 358 (982)
+..+..+..+++|++|++++|++++..+..|..+++|++|++++|++++..+..++.+++|++|++++|++++..+..+.
T Consensus 123 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (272)
T 3rfs_A 123 SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFD 202 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHh
Confidence 44444444445555555555555444444444444444455555544444444444455555555555555544444444
Q ss_pred CCCcccEEEeccccccccCCccccCccccceeecccccccccCCcccc
Q 002010 359 RNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELG 406 (982)
Q Consensus 359 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~ 406 (982)
.+++|+.|++++|.+.+. +++|+.|++..|.++|.+|.+++
T Consensus 203 ~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 203 RLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp TCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred CCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 445555555555544422 22344444444444444444443
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.1e-25 Score=250.43 Aligned_cols=268 Identities=15% Similarity=0.180 Sum_probs=191.3
Q ss_pred CCccceeeeCCCCCEEEEEeccCCccccCCcCcccc--ccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccc
Q 002010 59 HCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLL--TKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFA 136 (982)
Q Consensus 59 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l--~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~ 136 (982)
|.+|.++.|+. ..+..++++++.+. |..++.+ ++++.|++++|.+++..+. +..+++|++|+|++|.+.+...
T Consensus 36 c~~W~~~~~~~-~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 36 CKRWYRLASDE-SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp CHHHHHHHTCS-TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHhcCc-hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHH
Confidence 55899999973 45778888887765 4456666 8899999999999887665 5678999999999998876534
Q ss_pred hhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCc-ccccc-cCCCccccCcceEeeccCc-ccccc-hhhHH
Q 002010 137 GQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGN-YFTGK-IPQSYSEIQSLEYIGLNGI-GLNGT-VPAFL 212 (982)
Q Consensus 137 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~n-~i~~~-~~~~l 212 (982)
...+..+++|++|+|++|++++..|..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 556788999999999999998888888999999999999999 67763 6667888999999999999 88764 56667
Q ss_pred hhhh-hHHHHhhcccc-ccc-ccCCCCCCCCCCCCEEecccCc-CcccCchhhcCCCccceeeccccc-CCCCCCccccC
Q 002010 213 SRLK-NLREMYIGYFN-TYT-GGIPPGFGALTQLQVLDMASCN-ISGEIPTSLSRLKLLHSLFLQMNK-LTGHIPPQLSG 287 (982)
Q Consensus 213 ~~l~-~L~~L~l~~~n-~~~-~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~ 287 (982)
..++ +|++|+++++. .++ +.+|..+..+++|++|++++|. +++..+..+.++++|++|++++|. ++......+..
T Consensus 191 ~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~ 270 (336)
T 2ast_B 191 AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGE 270 (336)
T ss_dssp HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGG
T ss_pred HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhc
Confidence 7777 77777776653 233 4455556666777777777776 555566666677777777777764 22222224566
Q ss_pred CCCCCEEEeeCCcccCcCchhhhcc-cchhhhhhccCCCCCCCCCcCCC
Q 002010 288 LISLKSLDLSLNYLTGEIPESFAAL-KNLTLLQLFKNNLRGPIPSFLGD 335 (982)
Q Consensus 288 l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~ 335 (982)
+++|+.|++++| ++. ..+..+ ..++.|++++|++++..|..++.
T Consensus 271 ~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 271 IPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 677777777766 332 223333 23555666666666666665543
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=6.5e-25 Score=246.41 Aligned_cols=259 Identities=15% Similarity=0.184 Sum_probs=157.7
Q ss_pred EEeccCCCCCCCChhhhhhcccceeeccCCccccccch---hhhhcCC-CccEEeccCccccCCCchhcccc-----ccc
Q 002010 100 LTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAG---QIVRGMT-ELQVLDAYNNNFTGPLPVEIASL-----KSL 170 (982)
Q Consensus 100 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~---~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L 170 (982)
++++.|+++|.+|..+...++|++|||++|.+.+..+. +.+.+++ +|++|+|++|++++..+..++.+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 45666677766666666666677777777776543331 3445566 67777777777776666666665 677
Q ss_pred cEEeecCcccccccCCCcccc-----CcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCC-CCCC
Q 002010 171 RHLSFGGNYFTGKIPQSYSEI-----QSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGAL-TQLQ 244 (982)
Q Consensus 171 ~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l-~~L~ 244 (982)
++|+|++|++++..+..++.. ++|++|++++|.+++..+..+... +..+ ++|+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~---------------------l~~~~~~L~ 141 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA---------------------FSNLPASIT 141 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH---------------------HTTSCTTCC
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH---------------------HHhCCCcee
Confidence 777777777776666544433 677777777777665555444321 1222 4677
Q ss_pred EEecccCcCcccCch----hhcCCC-ccceeecccccCCCCCCcccc----CC-CCCCEEEeeCCcccCc----Cchhhh
Q 002010 245 VLDMASCNISGEIPT----SLSRLK-LLHSLFLQMNKLTGHIPPQLS----GL-ISLKSLDLSLNYLTGE----IPESFA 310 (982)
Q Consensus 245 ~L~L~~n~l~~~~~~----~l~~l~-~L~~L~L~~N~l~~~~~~~l~----~l-~~L~~L~Ls~N~l~~~----~~~~l~ 310 (982)
+|+|++|++++..+. .+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.|++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 777777777653333 334444 677777777777665554333 33 4777777777777653 333444
Q ss_pred c-ccchhhhhhccCCCCCCCC----CcCCCCCCccEEEccCCCcccc-------cCccccCCCcccEEEeccccccccCC
Q 002010 311 A-LKNLTLLQLFKNNLRGPIP----SFLGDFPNLEVLQVWGNNFTFE-------LPENLGRNGKLLILDVTSNHLTGTIP 378 (982)
Q Consensus 311 ~-l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~-------~~~~l~~l~~L~~L~L~~N~l~~~~p 378 (982)
. .++|++|+|++|.+++..+ ..+..+++|+.|++++|.+... ++..+..+++|+.||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 4 2467777777777665433 3345667777777777774322 23355666777777777777765544
Q ss_pred c
Q 002010 379 R 379 (982)
Q Consensus 379 ~ 379 (982)
.
T Consensus 302 ~ 302 (362)
T 3goz_A 302 I 302 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.6e-23 Score=225.10 Aligned_cols=204 Identities=23% Similarity=0.199 Sum_probs=149.3
Q ss_pred CCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCC
Q 002010 333 LGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLT 412 (982)
Q Consensus 333 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~ 412 (982)
+.++++++.+++++|.++. +|..+. ++++.|++++|++++..+..+..+++|++|++++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 4456666777777766663 343332 4566666666666655555555555555555555555543322 4455555
Q ss_pred EEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccc
Q 002010 413 KIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRL 492 (982)
Q Consensus 413 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l 492 (982)
+|++++|+++ .+|..+..+ .+|++|++++|+|++..|..|..+++|++|+|++|++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l-----------------------~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTL-----------------------PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTC-----------------------TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCC-cCchhhccC-----------------------CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCC
Confidence 5555555554 333333333 5677777888888877778899999999999999999
Q ss_pred cCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccc
Q 002010 493 EGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITG 566 (982)
Q Consensus 493 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 566 (982)
++..+..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+.-
T Consensus 137 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9776777789999999999999999777777899999999999999998 789899999999999999999873
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=229.05 Aligned_cols=227 Identities=19% Similarity=0.184 Sum_probs=125.8
Q ss_pred ccEEEeccCCCCCCCCh---hhhhhcccceeeccCCccccccchhhh-hcCCCccEEeccCccccCCCc----hhccccc
Q 002010 97 LVNLTISNVNLTGRLPS---EMALLTSLKVFNISGNVFQGNFAGQIV-RGMTELQVLDAYNNNFTGPLP----VEIASLK 168 (982)
Q Consensus 97 L~~L~l~~n~l~~~~p~---~l~~l~~L~~L~Ls~n~l~~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~ 168 (982)
++.|.+.++.++...-. ....+++|++|+|++|.+.+..+..++ ..+++|++|+|++|++++..| ..+..++
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 55666665554421111 112334566666666666655554443 556666666666666665443 3334566
Q ss_pred cccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEec
Q 002010 169 SLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDM 248 (982)
Q Consensus 169 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L 248 (982)
+|++|+|++|++++..|..|+.+++|++|+|++|.+.+...- ..+..++.+++|++|+|
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~~~~~~~~l~~L~~L~L 204 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGL---------------------MAALCPHKFPAIQNLAL 204 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHH---------------------HTTSCTTSSCCCCSCBC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhh---------------------hHHHhhhcCCCCCEEEC
Confidence 666666666666665556666666666666666654311000 00122355666777777
Q ss_pred ccCcCcccCch----hhcCCCccceeecccccCCCCCCccccCC---CCCCEEEeeCCcccCcCchhhhcccchhhhhhc
Q 002010 249 ASCNISGEIPT----SLSRLKLLHSLFLQMNKLTGHIPPQLSGL---ISLKSLDLSLNYLTGEIPESFAALKNLTLLQLF 321 (982)
Q Consensus 249 ~~n~l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 321 (982)
++|+++. ++. .++.+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|+
T Consensus 205 s~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls 280 (310)
T 4glp_A 205 RNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLS 280 (310)
T ss_dssp CSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECC
T ss_pred CCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECC
Confidence 7777652 222 24566667777777777766656555554 46666666666666 4454443 566666666
Q ss_pred cCCCCCCCCCcCCCCCCccEEEccCCCcc
Q 002010 322 KNNLRGPIPSFLGDFPNLEVLQVWGNNFT 350 (982)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (982)
+|++++. |. +..+++|+.|++++|+++
T Consensus 281 ~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 281 SNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 6666643 22 455566666666666554
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=8.1e-25 Score=245.65 Aligned_cols=255 Identities=19% Similarity=0.199 Sum_probs=164.7
Q ss_pred hhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccC----ccccCCC-cccEEEeccccccccCCccccCc-----ccc
Q 002010 318 LQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELP----ENLGRNG-KLLILDVTSNHLTGTIPRDLCKG-----GKL 387 (982)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~~-----~~L 387 (982)
+++++|.+++.+|..+...++|++|++++|.++...+ ..+..++ +|++|+|++|++++..+..++.+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4567777777777766666667777777777776555 5566666 67777777777776666655554 666
Q ss_pred ceeecccccccccCCccccC----C-CCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccc--cCCccE
Q 002010 388 KSLILMQNFFIGPIPEELGQ----C-KSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMS--GASLNQ 460 (982)
Q Consensus 388 ~~L~l~~N~~~~~~~~~l~~----l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~L~~ 460 (982)
++|++++|.+.+..+..+.. + ++|++|+|++|++++..+..+... +. ..+|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~--------------------l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA--------------------FSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH--------------------HTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH--------------------HHhCCCceeE
Confidence 66666666666555543332 2 566666666666654333222110 11 135666
Q ss_pred EEeeccccCCCC----chhccCCC-CcceeeeccccccCCCccccccc-----cccceeeeeccccCCC----CCccccc
Q 002010 461 LKVANNNITGKI----PAAIGNLP-SLNILSLQNNRLEGEIPVESFNL-----KMITSINISDNNISGE----IPYSISQ 526 (982)
Q Consensus 461 L~L~~N~i~~~~----p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~ 526 (982)
|+|++|++++.. +..+..++ +|++|+|++|++++..+..+... ++|++|||++|+|++. ++..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 666666666433 33344554 78888888888876665544433 5788888888888753 4445544
Q ss_pred -ccCCCeeeCCCCcccCCCC----cccccccccceEEccccccccc-------CccccccccccceecccCCccccCC
Q 002010 527 -CHSLTSVDLSRNSLYGKIP----PGISKLIDLSILNLSRNGITGS-------IPNEMRNMMSLTTLDLSYNNLIGNI 592 (982)
Q Consensus 527 -l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~l~~l~~L~~L~Ls~N~l~~~i 592 (982)
.++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+. ++..+..+++|+.||+++|++.+..
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 3588888888888876544 3346678888888888885533 3345677888999999999887653
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.2e-23 Score=227.40 Aligned_cols=227 Identities=21% Similarity=0.230 Sum_probs=146.4
Q ss_pred ccEEEccCCCcccccCc---cccCCCcccEEEeccccccccCCccc--cCccccceeecccccccccCC----ccccCCC
Q 002010 339 LEVLQVWGNNFTFELPE---NLGRNGKLLILDVTSNHLTGTIPRDL--CKGGKLKSLILMQNFFIGPIP----EELGQCK 409 (982)
Q Consensus 339 L~~L~L~~N~l~~~~~~---~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~~~L~~L~l~~N~~~~~~~----~~l~~l~ 409 (982)
++.+.+.++.++..... .+..+++|++|++++|.+++..|..+ ..+++|++|++++|.+.+..+ ..+..++
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 45556655555421111 11123446677777777766666666 666667777777776665444 3345677
Q ss_pred CCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeecc
Q 002010 410 SLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQN 489 (982)
Q Consensus 410 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 489 (982)
+|++|+|++|++++..|..+..+++|++|++++|++.+... -..+..++.+++|++|+|++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------------------~~~~~~~~~l~~L~~L~Ls~ 206 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG-------------------LMAALCPHKFPAIQNLALRN 206 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH-------------------HHTTSCTTSSCCCCSCBCCS
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh-------------------hhHHHhhhcCCCCCEEECCC
Confidence 77777777777776666677666666666666665442100 00112235667777777777
Q ss_pred ccccCCCcc----ccccccccceeeeeccccCCCCCcccccc---cCCCeeeCCCCcccCCCCcccccccccceEEcccc
Q 002010 490 NRLEGEIPV----ESFNLKMITSINISDNNISGEIPYSISQC---HSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRN 562 (982)
Q Consensus 490 N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 562 (982)
|+++ .++. .+..+++|++|||++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|
T Consensus 207 N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N 282 (310)
T 4glp_A 207 TGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSN 282 (310)
T ss_dssp SCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSC
T ss_pred CCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCC
Confidence 7775 2332 23566778888888888877767666666 58888888888887 6677664 68888888888
Q ss_pred cccccCccccccccccceecccCCcccc
Q 002010 563 GITGSIPNEMRNMMSLTTLDLSYNNLIG 590 (982)
Q Consensus 563 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 590 (982)
+|++. |. +..+++|+.|+|++|+++.
T Consensus 283 ~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 283 RLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 88853 43 6778888888888888763
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=5.7e-25 Score=249.45 Aligned_cols=249 Identities=18% Similarity=0.211 Sum_probs=169.1
Q ss_pred CCchhccccccccEEeecCcccccccC----CCccccCcceEeeccCcc---cccchhhHHhhhhhHHHHhhcccccccc
Q 002010 159 PLPVEIASLKSLRHLSFGGNYFTGKIP----QSYSEIQSLEYIGLNGIG---LNGTVPAFLSRLKNLREMYIGYFNTYTG 231 (982)
Q Consensus 159 ~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~n~---i~~~~~~~l~~l~~L~~L~l~~~n~~~~ 231 (982)
.++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|. +.+.+|..+..+.
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~--------------- 87 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLL--------------- 87 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHH---------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHH---------------
Confidence 455556666666666666666665433 235566666666666643 3344454443332
Q ss_pred cCCCCCCCCCCCCEEecccCcCcc----cCchhhcCCCccceeecccccCCCCCCccccC----C---------CCCCEE
Q 002010 232 GIPPGFGALTQLQVLDMASCNISG----EIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSG----L---------ISLKSL 294 (982)
Q Consensus 232 ~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~----l---------~~L~~L 294 (982)
..+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.++...+..+.. + ++|++|
T Consensus 88 ---~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L 164 (386)
T 2ca6_A 88 ---QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI 164 (386)
T ss_dssp ---HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred ---HHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEE
Confidence 234667889999999999987 46777888899999999999887544444333 3 789999
Q ss_pred EeeCCccc-CcCc---hhhhcccchhhhhhccCCCCC-----CCCCcCCCCCCccEEEccCCCcc----cccCccccCCC
Q 002010 295 DLSLNYLT-GEIP---ESFAALKNLTLLQLFKNNLRG-----PIPSFLGDFPNLEVLQVWGNNFT----FELPENLGRNG 361 (982)
Q Consensus 295 ~Ls~N~l~-~~~~---~~l~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~~~~l~~l~ 361 (982)
+|++|+++ +.++ ..+..+++|++|+|++|+++. ..|..+..+++|++|+|++|.++ ..+|..+..++
T Consensus 165 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 165 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred ECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 99999887 3344 456677888888888888872 34446778888888888888885 45677777788
Q ss_pred cccEEEecccccccc----CCcccc--Cccccceeecccccccc----cCCccc-cCCCCCCEEEccCCccCCCC
Q 002010 362 KLLILDVTSNHLTGT----IPRDLC--KGGKLKSLILMQNFFIG----PIPEEL-GQCKSLTKIRFSKNYLNGTI 425 (982)
Q Consensus 362 ~L~~L~L~~N~l~~~----~p~~~~--~~~~L~~L~l~~N~~~~----~~~~~l-~~l~~L~~L~Ls~N~l~~~~ 425 (982)
+|+.|+|++|.+++. ++..+. .+++|+.|++++|.+.+ .+|..+ .++++|++|++++|++++..
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 888888888887765 344442 26667777777777666 355555 45677777777777766544
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=8e-23 Score=215.15 Aligned_cols=204 Identities=16% Similarity=0.187 Sum_probs=114.7
Q ss_pred ccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCc-cccccchhhhhcCCCccEEeccC-ccccCCCch
Q 002010 85 GSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNV-FQGNFAGQIVRGMTELQVLDAYN-NNFTGPLPV 162 (982)
Q Consensus 85 g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~ 162 (982)
..+|. +. ++|++|++++|++++..+..+..+++|++|+|++|. ++ .++...|.++++|++|++++ |++++..+.
T Consensus 24 ~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 24 QRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPD 99 (239)
T ss_dssp SSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTT
T ss_pred cccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHH
Confidence 34565 32 378888888888886655566666666666666665 43 23333444555555555555 555544444
Q ss_pred hccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCC
Q 002010 163 EIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQ 242 (982)
Q Consensus 163 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~ 242 (982)
.+.++++|++|++++|++++ +|. |+.+++
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~--------------------------------------------------~~~l~~ 128 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD--------------------------------------------------LTKVYS 128 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC--------------------------------------------------CTTCCB
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc--------------------------------------------------cccccc
Confidence 45555555555555555442 222 333444
Q ss_pred CC---EEecccC-cCcccCchhhcCCCccc-eeecccccCCCCCCccccCCCCCCEEEeeCCc-ccCcCchhhhcc-cch
Q 002010 243 LQ---VLDMASC-NISGEIPTSLSRLKLLH-SLFLQMNKLTGHIPPQLSGLISLKSLDLSLNY-LTGEIPESFAAL-KNL 315 (982)
Q Consensus 243 L~---~L~L~~n-~l~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l-~~L 315 (982)
|+ +|++++| ++++..+..|..+++|+ +|++++|+++...+..+.. ++|+.|+|++|+ +++..+..|..+ ++|
T Consensus 129 L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 129 TDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp CCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred cccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 44 6666666 66655555566666666 6666666666322223333 566666666663 665555556666 666
Q ss_pred hhhhhccCCCCCCCCCcCCCCCCccEEEccCC
Q 002010 316 TLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGN 347 (982)
Q Consensus 316 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 347 (982)
+.|++++|++++..+. .+++|+.|+++++
T Consensus 208 ~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 208 SLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp SEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred cEEECCCCccccCChh---HhccCceeeccCc
Confidence 6666666666633222 4556666666554
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=6.2e-25 Score=249.18 Aligned_cols=249 Identities=18% Similarity=0.234 Sum_probs=171.9
Q ss_pred CCCCcCCCCCCccEEEccCCCcccccC----ccccCCCcccEEEeccc---cccccCCccccCccccceeeccccccccc
Q 002010 328 PIPSFLGDFPNLEVLQVWGNNFTFELP----ENLGRNGKLLILDVTSN---HLTGTIPRDLCKGGKLKSLILMQNFFIGP 400 (982)
Q Consensus 328 ~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N---~l~~~~p~~~~~~~~L~~L~l~~N~~~~~ 400 (982)
.++..+..+++|+.|+|++|.++...+ ..+..+++|++|+|++| ++++.+|..+..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~----------------- 85 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL----------------- 85 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH-----------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH-----------------
Confidence 345556667777788888777775533 33556777777777774 344444443310
Q ss_pred CCccccCCCCCCEEEccCCccCC----CCCccccCCCccccccCCCccccccCCccccc--------------CCccEEE
Q 002010 401 IPEELGQCKSLTKIRFSKNYLNG----TIPAGLFNLPLLNMMELDDNLLSGELPEKMSG--------------ASLNQLK 462 (982)
Q Consensus 401 ~~~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--------------~~L~~L~ 462 (982)
+...+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.++...+..+.. ++|++|+
T Consensus 86 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 86 LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 00112444555555555555554 24444445555555555555554322222211 5788888
Q ss_pred eeccccC-CCCc---hhccCCCCcceeeeccccccC-----CCccccccccccceeeeeccccC----CCCCcccccccC
Q 002010 463 VANNNIT-GKIP---AAIGNLPSLNILSLQNNRLEG-----EIPVESFNLKMITSINISDNNIS----GEIPYSISQCHS 529 (982)
Q Consensus 463 L~~N~i~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~ 529 (982)
+++|+++ +.++ ..+..+++|++|+|++|+++. ..|..+..+++|++|+|++|+|+ +.+|..+..+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 8888887 4444 467788999999999999872 34447788999999999999996 567888999999
Q ss_pred CCeeeCCCCcccCC----CCccc--ccccccceEEcccccccc----cCcccc-ccccccceecccCCccccCCC
Q 002010 530 LTSVDLSRNSLYGK----IPPGI--SKLIDLSILNLSRNGITG----SIPNEM-RNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 530 L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~L~Ls~N~l~~~ip 593 (982)
|+.|+|++|.|++. +|..+ +.+++|+.|+|++|+|++ .+|..+ .++++|++|+|++|++++..|
T Consensus 246 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 246 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999876 56666 348999999999999997 488877 668999999999999987664
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=2.3e-22 Score=224.46 Aligned_cols=246 Identities=17% Similarity=0.124 Sum_probs=175.6
Q ss_pred CCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccch
Q 002010 58 AHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAG 137 (982)
Q Consensus 58 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~ 137 (982)
|.|+|..|.|+..+ + ..||..| .+++++|+|++|+++...+..|.++++|++|+|++|.+.+.++.
T Consensus 7 C~C~~~~v~C~~~~-L-----------t~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 7 CHCSNRVFLCQESK-V-----------TEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp SEEETTEEEEESTT-C-----------CSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred cEeeCCEEEecCCC-C-----------CccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 55889999997532 1 2567665 36899999999999955556789999999999999998888888
Q ss_pred hhhhcCCCccE-EeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCc-ccccchhhHHhhh
Q 002010 138 QIVRGMTELQV-LDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGI-GLNGTVPAFLSRL 215 (982)
Q Consensus 138 ~~~~~l~~L~~-L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n-~i~~~~~~~l~~l 215 (982)
.+|.++++|++ +.++.|+++...|..+..+++|++|++++|++++..+..+....++..|++.++ .+.
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~---------- 142 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH---------- 142 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC----------
T ss_pred hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc----------
Confidence 88888888775 666778998777888999999999999999998777777777777777777542 222
Q ss_pred hhHHHHhhcccccccccCCCCCCCCC-CCCEEecccCcCcccCchhhcCCCccceeeccc-ccCCCCCCccccCCCCCCE
Q 002010 216 KNLREMYIGYFNTYTGGIPPGFGALT-QLQVLDMASCNISGEIPTSLSRLKLLHSLFLQM-NKLTGHIPPQLSGLISLKS 293 (982)
Q Consensus 216 ~~L~~L~l~~~n~~~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~ 293 (982)
...+..|..+. .+++|+|++|+|+.. |.......+|++|++++ |.++...+..|.++++|++
T Consensus 143 ---------------~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~ 206 (350)
T 4ay9_X 143 ---------------TIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVI 206 (350)
T ss_dssp ---------------EECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSE
T ss_pred ---------------cccccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccch
Confidence 11223344443 577888888888844 43444456788888864 5666444456777888888
Q ss_pred EEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCC
Q 002010 294 LDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGN 347 (982)
Q Consensus 294 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 347 (982)
|||++|+|+...+..|.++++|+.+++ ++++ .+| .+..+++|+.++++++
T Consensus 207 LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 207 LDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp EECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred hhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 888888888655556666666665554 3344 344 2566677777776544
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=5.3e-24 Score=236.79 Aligned_cols=234 Identities=18% Similarity=0.176 Sum_probs=104.7
Q ss_pred CCccEEeccCccccCCCchhccccccccEEeecCcccccc-cCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHh
Q 002010 144 TELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGK-IPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMY 222 (982)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~ 222 (982)
+++++|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|++++|.+.+..+..+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l---------- 138 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL---------- 138 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHH----------
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHH----------
Confidence 4444444444444433332 33444455555555444433 44444444444555444444433333222
Q ss_pred hcccccccccCCCCCCCCCCCCEEecccC-cCccc-CchhhcCCCccceeecccc-cCCCC-CCccccCCC-CCCEEEee
Q 002010 223 IGYFNTYTGGIPPGFGALTQLQVLDMASC-NISGE-IPTSLSRLKLLHSLFLQMN-KLTGH-IPPQLSGLI-SLKSLDLS 297 (982)
Q Consensus 223 l~~~n~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~L~~N-~l~~~-~~~~l~~l~-~L~~L~Ls 297 (982)
+.+++|++|++++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 139 ---------------~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 139 ---------------AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ---------------TTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred ---------------hcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 22334444444444 33331 3333444444444444444 44432 233344444 45555555
Q ss_pred CC--ccc-CcCchhhhcccchhhhhhccCC-CCCCCCCcCCCCCCccEEEccCCC-cccccCccccCCCcccEEEecccc
Q 002010 298 LN--YLT-GEIPESFAALKNLTLLQLFKNN-LRGPIPSFLGDFPNLEVLQVWGNN-FTFELPENLGRNGKLLILDVTSNH 372 (982)
Q Consensus 298 ~N--~l~-~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~ 372 (982)
+| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 44 222 2233444445555555555555 444444445555555555555553 22211223455555555555555
Q ss_pred ccccCCccccCc-cccceeecccccccccCCccccC
Q 002010 373 LTGTIPRDLCKG-GKLKSLILMQNFFIGPIPEELGQ 407 (982)
Q Consensus 373 l~~~~p~~~~~~-~~L~~L~l~~N~~~~~~~~~l~~ 407 (982)
++. ..+..+ .++..|++++|.+++..|..+++
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 221 122222 23555556666666666665554
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.3e-21 Score=207.34 Aligned_cols=183 Identities=18% Similarity=0.157 Sum_probs=132.0
Q ss_pred ccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeec
Q 002010 386 KLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVAN 465 (982)
Q Consensus 386 ~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~ 465 (982)
..++++++++.+. .+|..+. ++++.|+|++|.+++..+..|..++ +|++|+|++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~-----------------------~L~~L~L~~ 68 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLT-----------------------KLTWLNLDY 68 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCT-----------------------TCCEEECTT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcc-----------------------cCCEEECCC
Confidence 3455666666555 2333332 3555666666666555444454444 556666666
Q ss_pred cccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCC
Q 002010 466 NNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIP 545 (982)
Q Consensus 466 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 545 (982)
|+|++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 69 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 69 NQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 66666666777788888888888888886666667788888888888888887667777888888888888888887666
Q ss_pred cccccccccceEEcccccccccCccccccccccceecccCCccccCCCC
Q 002010 546 PGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 546 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..+.
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 6788888888888888888877777888888888888888888876443
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=7.9e-22 Score=207.54 Aligned_cols=203 Identities=17% Similarity=0.233 Sum_probs=164.1
Q ss_pred cCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeeccccc-CCCCCCccccCCCCCCEEEeeC-CcccCcCchhh
Q 002010 232 GIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNK-LTGHIPPQLSGLISLKSLDLSL-NYLTGEIPESF 309 (982)
Q Consensus 232 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~~~~l 309 (982)
.+|. +. ++|++|++++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 33 389999999999998777789999999999999997 8877677889999999999998 99997777888
Q ss_pred hcccchhhhhhccCCCCCCCCCcCCCCCCcc---EEEccCC-CcccccCccccCCCccc-EEEeccccccccCCccccCc
Q 002010 310 AALKNLTLLQLFKNNLRGPIPSFLGDFPNLE---VLQVWGN-NFTFELPENLGRNGKLL-ILDVTSNHLTGTIPRDLCKG 384 (982)
Q Consensus 310 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~~~~l~~l~~L~-~L~L~~N~l~~~~p~~~~~~ 384 (982)
..+++|++|++++|++++ +|. |..+++|+ +|++++| .++...+..|..+++|+ .|++++|+++ .+|......
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 999999999999999986 665 88888888 9999999 88877777788899999 9999999998 555544444
Q ss_pred cccceeeccccc-ccccCCccccCC-CCCCEEEccCCccCCCCCccccCCCccccccCCCc
Q 002010 385 GKLKSLILMQNF-FIGPIPEELGQC-KSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDN 443 (982)
Q Consensus 385 ~~L~~L~l~~N~-~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 443 (982)
++|++|++++|+ +.+..+..|..+ ++|++|++++|++++ +|.. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 788888888884 887777788888 888888888888874 4433 4555666666554
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=8.2e-22 Score=215.55 Aligned_cols=126 Identities=29% Similarity=0.450 Sum_probs=59.2
Q ss_pred CCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 239 ALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 239 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
.+++|++|++++|++++. + .+..+++|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|
T Consensus 105 ~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 178 (308)
T 1h6u_A 105 GLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTL 178 (308)
T ss_dssp TCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred CCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEE
Confidence 344444444444444432 1 14444445555555554443222 4444455555555555443222 4444555555
Q ss_pred hhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEecccccc
Q 002010 319 QLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLT 374 (982)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 374 (982)
++++|++++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|+++
T Consensus 179 ~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 179 KADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp ECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred ECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 555555543322 444555555555555555332 2455555555555555554
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=1.9e-21 Score=206.26 Aligned_cols=178 Identities=21% Similarity=0.206 Sum_probs=112.3
Q ss_pred CCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhc
Q 002010 242 QLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLF 321 (982)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 321 (982)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4566777777776 4554443 467777777777776666667777777777777777776666666667777777777
Q ss_pred cCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccC
Q 002010 322 KNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPI 401 (982)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~ 401 (982)
+|++++..+..|..+++|++|++++|.+++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+.+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 77776666666666666666666666666555555566666666666666666444444555555555555555555544
Q ss_pred CccccCCCCCCEEEccCCccC
Q 002010 402 PEELGQCKSLTKIRFSKNYLN 422 (982)
Q Consensus 402 ~~~l~~l~~L~~L~Ls~N~l~ 422 (982)
+..+..+++|++|++++|+++
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBC
T ss_pred HHHHhCCCCCCEEEeeCCcee
Confidence 445555555555555555554
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=2.1e-21 Score=212.31 Aligned_cols=196 Identities=21% Similarity=0.299 Sum_probs=131.8
Q ss_pred ccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccc
Q 002010 357 LGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLN 436 (982)
Q Consensus 357 l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 436 (982)
...+++|+.|++++|.++. +| .+..+++|++|++++|.+.+..+ +..+++|++|++++|++++. + .+..+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l---- 106 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGL---- 106 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTC----
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCC----
Confidence 3445677777777777763 33 45566666666666666654433 56666666666666666532 1 34444
Q ss_pred cccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeecccc
Q 002010 437 MMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNI 516 (982)
Q Consensus 437 ~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 516 (982)
.+|++|++++|++++. + .+..+++|++|++++|++++..+ +..+++|++|++++|++
T Consensus 107 -------------------~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 163 (308)
T 1h6u_A 107 -------------------QSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQV 163 (308)
T ss_dssp -------------------TTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred -------------------CCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcC
Confidence 4566666666666643 2 26777888888888888775433 67778888888888888
Q ss_pred CCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccC
Q 002010 517 SGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGN 591 (982)
Q Consensus 517 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 591 (982)
++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++.
T Consensus 164 ~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 164 SDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred CCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 75433 7778888888888888875433 7788888888888888875543 77888888888888888763
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=4.6e-21 Score=196.97 Aligned_cols=134 Identities=20% Similarity=0.268 Sum_probs=89.5
Q ss_pred CCCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCcccccc
Q 002010 56 PSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNF 135 (982)
Q Consensus 56 ~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 135 (982)
..|.|.|.+|.|+..+ ...+|..+ .++|++|++++|++++..+..+..+++|++|+|++|.+++ +
T Consensus 3 ~~C~C~~~~v~c~~~~------------l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~ 67 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG------------RTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-L 67 (208)
T ss_dssp TTCEEETTEEECCSSC------------CSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-C
T ss_pred CCCEECCCEEEecCCC------------ccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-c
Confidence 3467999999998643 12344433 4578889999998887666667778888888888887763 4
Q ss_pred chhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCccc
Q 002010 136 AGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGL 204 (982)
Q Consensus 136 ~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i 204 (982)
+...+.++++|++|++++|++++..+..++.+++|++|+|++|++++..+..|..+++|++|++++|.+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc
Confidence 445566677777777777777755555566777777777777776655444455555555555544433
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.7e-21 Score=209.38 Aligned_cols=145 Identities=14% Similarity=0.074 Sum_probs=116.1
Q ss_pred cccccccccccceEEEEEEeCCCcEEEEEEeccCCCCC-----------------chhhHHHHHHHHhcCCCCcccceEe
Q 002010 694 LKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGG-----------------NDHGFLAEIQTLGRIRHRNIVRLLG 756 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~~E~~~l~~l~h~niv~~~~ 756 (982)
|..++.||+|+||.||+|...+|+.||+|.+....... ....+.+|+.++++++ | +++++
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 45668999999999999988779999999985432110 2346889999999998 5 66666
Q ss_pred EEEcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEe
Q 002010 757 YVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVA 836 (982)
Q Consensus 757 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 836 (982)
++. .+..++||||+++++|.+ +.. .....++.|++.|++|||+.+ |+||||||+||+++ ++.+||+
T Consensus 169 ~~~-~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 169 VYA-WEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp EEE-EETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred EEe-ccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 554 366799999999999998 531 234579999999999999998 99999999999999 9999999
Q ss_pred ccccchhccccCCccccccccccccccccccccc
Q 002010 837 DFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYT 870 (982)
Q Consensus 837 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 870 (982)
|||+|+. +..|+|||.+..
T Consensus 235 DFG~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 235 DFPQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp CCTTCEE---------------TTSTTHHHHHHH
T ss_pred ECCCCeE---------------CCCCCHHHHHHH
Confidence 9999863 234788997653
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=8.7e-21 Score=222.36 Aligned_cols=189 Identities=26% Similarity=0.375 Sum_probs=109.5
Q ss_pred CccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEcc
Q 002010 338 NLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFS 417 (982)
Q Consensus 338 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls 417 (982)
+|+.|++++|.+++ +|..+. ++|++|+|++|+|+ .+| .. +++|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~------------------------l~~L~~L~Ls 108 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---EL------------------------PASLEYLDAC 108 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CC------------------------CTTCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cc------------------------cCCCCEEEcc
Confidence 56667776666664 444332 45666666666665 333 22 3444444444
Q ss_pred CCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCc
Q 002010 418 KNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIP 497 (982)
Q Consensus 418 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 497 (982)
+|+|++ +|. +.. +|+.|++++|.|++ +|. ...+|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|
T Consensus 109 ~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp 176 (571)
T 3cvr_A 109 DNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE--LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LP 176 (571)
T ss_dssp SSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC--cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cc
Confidence 444443 333 322 44444444444443 222 22456666666666664 333 45667777777777764 55
Q ss_pred cccccccccceeeeeccccCCCCCcccccccCC-------CeeeCCCCcccCCCCcccccccccceEEcccccccccCcc
Q 002010 498 VESFNLKMITSINISDNNISGEIPYSISQCHSL-------TSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPN 570 (982)
Q Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 570 (982)
. +. ++|++|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 177 ~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 177 E-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 5 43 67777777777776 4554 443 55 77777777777 5677777777777777777777777777
Q ss_pred ccccccc
Q 002010 571 EMRNMMS 577 (982)
Q Consensus 571 ~l~~l~~ 577 (982)
.+..+..
T Consensus 249 ~l~~l~~ 255 (571)
T 3cvr_A 249 SLSQQTA 255 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 7666544
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.2e-20 Score=210.62 Aligned_cols=122 Identities=18% Similarity=0.198 Sum_probs=77.7
Q ss_pred ceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCC-CcCCCCCCccE-EEcc
Q 002010 268 HSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIP-SFLGDFPNLEV-LQVW 345 (982)
Q Consensus 268 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 345 (982)
++++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45777777777 5565542 567788888888775555667777777777777777755444 45666666554 4555
Q ss_pred CCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeec
Q 002010 346 GNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLIL 392 (982)
Q Consensus 346 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l 392 (982)
+|+++...|..|..+++|++|++++|++++..+..+....++..|++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 66666666666666666666666666666444444444444444444
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.5e-20 Score=220.26 Aligned_cols=182 Identities=26% Similarity=0.379 Sum_probs=152.4
Q ss_pred ccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeec
Q 002010 386 KLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVAN 465 (982)
Q Consensus 386 ~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~ 465 (982)
+++.|++++|.+++ +|..+ .++|++|+|++|+|+ .+| ..+++|+.|++++|.|++ +|. +.. +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~-~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA-SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT-TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc-CCCEEECCC
Confidence 55566666666554 45444 268999999999999 677 457899999999999998 565 544 999999999
Q ss_pred cccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCC
Q 002010 466 NNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIP 545 (982)
Q Consensus 466 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 545 (982)
|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 99997 555 68999999999999996 665 57899999999999997 666 66 99999999999999 777
Q ss_pred ccccccccc-------ceEEcccccccccCccccccccccceecccCCccccCCCC
Q 002010 546 PGISKLIDL-------SILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 546 ~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 7 665 78 99999999999 6888888899999999999999998885
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=7.3e-20 Score=187.99 Aligned_cols=114 Identities=18% Similarity=0.147 Sum_probs=67.3
Q ss_pred hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccc
Q 002010 474 AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLID 553 (982)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 553 (982)
..|..+++|++|++++|++++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 34445555555555555555443334455555666666666665555555566666666666666666555555666666
Q ss_pred cceEEcccccccccCccccccccccceecccCCccccCCCC
Q 002010 554 LSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 554 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
|+.|+|++|.+.+ .+++|++|+++.|+++|.+|.
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBC
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeec
Confidence 6666666666553 234566666777777766664
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=9.6e-21 Score=230.62 Aligned_cols=241 Identities=15% Similarity=0.145 Sum_probs=115.7
Q ss_pred cCchhHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEe
Q 002010 23 SCAYSDMDVLLKLKSSMIGPKGSGLKNWEPSSSPSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTI 102 (982)
Q Consensus 23 ~~~~~~~~~ll~~k~~~~~~~~~~~~~w~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l 102 (982)
+....++++|+++......+.+..-.+|... +...+.|.+++++. ++|+.++|.++++.. ++. ..|+.++|
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~-~~~-----~~l~~l~L 198 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGD--STPSGTATNSAVST-PLTPKIELFANGKDE-ANQ-----ALLQHKKL 198 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCC--CCccccCCCceecC-CccceEEeeCCCCCc-chh-----hHhhcCcc
Confidence 3557789999999998876655556677543 23467899998875 567777766554433 111 12233333
Q ss_pred ccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCccccc
Q 002010 103 SNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTG 182 (982)
Q Consensus 103 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 182 (982)
+.|.+. .++++.|.+. ..|..+..+++|++|+|++|.+.
T Consensus 199 s~~~i~---------------------------------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~- 237 (727)
T 4b8c_D 199 SQYSID---------------------------------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF- 237 (727)
T ss_dssp ---------------------------------------------------------------CCCCCCEEECTTSCCS-
T ss_pred Cccccc---------------------------------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-
Confidence 333332 2233333333 33444444555555555555544
Q ss_pred ccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhc
Q 002010 183 KIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLS 262 (982)
Q Consensus 183 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 262 (982)
.+|..+..+++|++|+|++|.+. .+|..|+++++|++|+|++|+|+ .+|..|+
T Consensus 238 ~l~~~~~~l~~L~~L~Ls~N~l~--------------------------~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 290 (727)
T 4b8c_D 238 NISANIFKYDFLTRLYLNGNSLT--------------------------ELPAEIKNLSNLRVLDLSHNRLT-SLPAELG 290 (727)
T ss_dssp CCCGGGGGCCSCSCCBCTTSCCS--------------------------CCCGGGGGGTTCCEEECTTSCCS-SCCSSGG
T ss_pred CCChhhcCCCCCCEEEeeCCcCc--------------------------ccChhhhCCCCCCEEeCcCCcCC-ccChhhc
Confidence 34444444444444444444332 23445666778888888888888 6788888
Q ss_pred CCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccc-hhhhhhccCCCCCCCCCcCCCCCCccE
Q 002010 263 RLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKN-LTLLQLFKNNLRGPIPSFLGDFPNLEV 341 (982)
Q Consensus 263 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~ 341 (982)
.+++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.
T Consensus 291 ~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~ 363 (727)
T 4b8c_D 291 SCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRF 363 (727)
T ss_dssp GGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------
T ss_pred CCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cce
Confidence 9999999999999997 67878999999999999999999988888876543 345889999999888864 456
Q ss_pred EEccCC
Q 002010 342 LQVWGN 347 (982)
Q Consensus 342 L~L~~N 347 (982)
|+++.|
T Consensus 364 l~l~~n 369 (727)
T 4b8c_D 364 IEINTD 369 (727)
T ss_dssp ------
T ss_pred eEeecc
Confidence 666666
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=4.2e-20 Score=191.22 Aligned_cols=138 Identities=21% Similarity=0.196 Sum_probs=121.0
Q ss_pred CccEEEeeccccCCCCc-hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeC
Q 002010 457 SLNQLKVANNNITGKIP-AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDL 535 (982)
Q Consensus 457 ~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (982)
.+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..+..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45677788888876644 45788999999999999998777778889999999999999999888888999999999999
Q ss_pred CCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCC
Q 002010 536 SRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 536 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+.
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 99999988899999999999999999999988899999999999999999999987663
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.3e-19 Score=187.59 Aligned_cols=137 Identities=19% Similarity=0.244 Sum_probs=120.9
Q ss_pred CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeC
Q 002010 456 ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDL 535 (982)
Q Consensus 456 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (982)
..++.|++++|+|++..+..|..+++|++|+|++|++++..|..+..+++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 46788888888888777778889999999999999998887888999999999999999999776677889999999999
Q ss_pred CCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCC
Q 002010 536 SRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNI 592 (982)
Q Consensus 536 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 592 (982)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++....
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 999999888899999999999999999999888888999999999999999987653
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=6.4e-19 Score=183.58 Aligned_cols=110 Identities=25% Similarity=0.299 Sum_probs=66.0
Q ss_pred CCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccc
Q 002010 57 SAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFA 136 (982)
Q Consensus 57 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~ 136 (982)
.+.|+|.+|.|+..+ .+.+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|.+. .++
T Consensus 16 ~~~Cs~~~v~c~~~~------------l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~ 80 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKR------------HASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALP 80 (229)
T ss_dssp TCEEETTEEECTTSC------------CSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CCEEeCCEeEccCCC------------cCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcC
Confidence 568999999997543 345665544 77888888888888777777777777776666666663 233
Q ss_pred hhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccc
Q 002010 137 GQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFT 181 (982)
Q Consensus 137 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 181 (982)
...+.++++|++|+|++|+|++..+..+..+++|++|+|++|+|+
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc
Confidence 334444444444444444444333333344444444444444433
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3.1e-19 Score=211.71 Aligned_cols=189 Identities=24% Similarity=0.332 Sum_probs=99.6
Q ss_pred cceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeecc
Q 002010 121 LKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLN 200 (982)
Q Consensus 121 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 200 (982)
+..++++.+.+.+..+ +..+++|+.|++++|.++. +| .++.+++|++|+|++|++++..| ++.+++|+.|+|+
T Consensus 23 l~~l~l~~~~i~~~~~---~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT---QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHTTCSCTTSEEC---HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHhccCCCcccccc---hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 3444444444443222 2334455555555555542 22 35555555555555555554333 5555555555555
Q ss_pred CcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCC
Q 002010 201 GIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGH 280 (982)
Q Consensus 201 ~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 280 (982)
+|.+.+ ++.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 96 ~N~l~~---------------------------l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l 146 (605)
T 1m9s_A 96 ENKIKD---------------------------LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI 146 (605)
T ss_dssp SSCCCC---------------------------CTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCCCC---------------------------ChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc
Confidence 544431 11345556666666666666542 3455666666666666666643
Q ss_pred CCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCccc
Q 002010 281 IPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTF 351 (982)
Q Consensus 281 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 351 (982)
..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++..
T Consensus 147 --~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 147 --TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp --GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred --hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 445566666666666666664443 55555555555555555542 235555566666666555554
No 359
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.7e-21 Score=229.93 Aligned_cols=107 Identities=22% Similarity=0.297 Sum_probs=53.5
Q ss_pred cceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccc
Q 002010 482 LNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSR 561 (982)
Q Consensus 482 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 561 (982)
|+.|+|++|+|++ +|. +..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .|+++++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4445555555543 333 444555555555555554 444455555555555555555543 33 455555555555555
Q ss_pred ccccccC-ccccccccccceecccCCccccCCC
Q 002010 562 NGITGSI-PNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 562 N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
|+|++.+ |..+..+++|+.|+|++|++++.+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 5555443 4555555555555555555555444
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.9e-19 Score=198.25 Aligned_cols=175 Identities=22% Similarity=0.209 Sum_probs=83.8
Q ss_pred CEEEccCCccCCCCCccccCCCccccccCCCccccccCCccc--ccCCccEEEeeccccCCCCchhccCCCCcceeeecc
Q 002010 412 TKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKM--SGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQN 489 (982)
Q Consensus 412 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~--~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 489 (982)
+.+++++|.++ .+|..+.. .++.|+|++|.|++..+..+ ...+|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 35556666555 34443321 23344444444443333333 123445555555555544444555555555555555
Q ss_pred ccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCccc---ccccccceEEcccccccc
Q 002010 490 NRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGI---SKLIDLSILNLSRNGITG 566 (982)
Q Consensus 490 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 566 (982)
|+|++..+..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 55554444445555555555555555554445555555555555555555553222223 345555555555555554
Q ss_pred cCcccccccccc--ceecccCCccc
Q 002010 567 SIPNEMRNMMSL--TTLDLSYNNLI 589 (982)
Q Consensus 567 ~~p~~l~~l~~L--~~L~Ls~N~l~ 589 (982)
..+..+..++.+ +.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 443444444442 44444444443
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=3.1e-19 Score=193.25 Aligned_cols=190 Identities=24% Similarity=0.335 Sum_probs=94.2
Q ss_pred cccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEee
Q 002010 119 TSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIG 198 (982)
Q Consensus 119 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 198 (982)
..+..+++..+.+.+... ...+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ ++.+++|++|+
T Consensus 24 ~~~~~~~l~~~~~~~~~~---~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAVT---QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHTTCSCTTSEEC---HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHhcCCCcccccc---hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 334444555555443222 2345556666666666653 22 35666666666666666664333 55555555555
Q ss_pred ccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCC
Q 002010 199 LNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLT 278 (982)
Q Consensus 199 L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 278 (982)
+++|.+.+. +.++.+++|++|++++|++++. ..+..+++|++|++++|+++
T Consensus 97 l~~n~l~~~---------------------------~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~ 147 (291)
T 1h6t_A 97 LDENKVKDL---------------------------SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT 147 (291)
T ss_dssp CCSSCCCCG---------------------------GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCCC---------------------------hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCC
Confidence 555444310 1134455555555555555532 24555555555555555555
Q ss_pred CCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcc
Q 002010 279 GHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFT 350 (982)
Q Consensus 279 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (982)
+. ..+..+++|++|++++|++++..+ +..+++|+.|++++|.+++. + .+..+++|+.|++++|+++
T Consensus 148 ~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 148 DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred cc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 33 345555555555555555553322 44444455555554444432 2 2444444444444444444
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=3.6e-19 Score=199.32 Aligned_cols=178 Identities=20% Similarity=0.188 Sum_probs=151.0
Q ss_pred ccccCCCccccccCCcccccCCccEEEeeccccCCCCchhcc-CCCCcceeeeccccccCCCccccccccccceeeeecc
Q 002010 436 NMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIG-NLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDN 514 (982)
Q Consensus 436 ~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 514 (982)
+.+++++|.++.. |..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..+..+++|++|+|++|
T Consensus 21 ~~l~c~~~~l~~i-P~~~~-~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 21 NILSCSKQQLPNV-PQSLP-SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp TEEECCSSCCSSC-CSSCC-TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCcc-CccCC-CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 5789999999864 44332 4689999999999988888888 9999999999999999877788999999999999999
Q ss_pred ccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCcccc---ccccccceecccCCccccC
Q 002010 515 NISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEM---RNMMSLTTLDLSYNNLIGN 591 (982)
Q Consensus 515 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~~~ 591 (982)
+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998888889999999999999999998889999999999999999999996555555 6799999999999999965
Q ss_pred CCCC-ccccc--cccccccCCcCcccC
Q 002010 592 IPSG-GQFLA--FNETSFIGNPNLCLL 615 (982)
Q Consensus 592 ip~~-~~~~~--~~~~~~~~n~~~c~~ 615 (982)
.+.. ..+.. +....+.|||+.|++
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCc
Confidence 4321 11222 245678999999965
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.8e-18 Score=180.11 Aligned_cols=137 Identities=22% Similarity=0.203 Sum_probs=123.0
Q ss_pred CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeC
Q 002010 456 ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDL 535 (982)
Q Consensus 456 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (982)
.+|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 56888888888888888889999999999999999998655566788999999999999999877888899999999999
Q ss_pred CCCcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCC
Q 002010 536 SRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 536 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999998 789999999999999999999997777889999999999999999998766
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=1.3e-18 Score=206.36 Aligned_cols=175 Identities=27% Similarity=0.280 Sum_probs=124.9
Q ss_pred CCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchh
Q 002010 237 FGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLT 316 (982)
Q Consensus 237 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 316 (982)
+..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +..+++|+.|+|++|.+++ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 45677788888888887743 3 47778888888888888876544 7778888888888888874 33 577777777
Q ss_pred hhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccccc
Q 002010 317 LLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNF 396 (982)
Q Consensus 317 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~ 396 (982)
.|+|++|++.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 777777777753 3467777777777777777754 566777777777777777776555 6667777777777777
Q ss_pred ccccCCccccCCCCCCEEEccCCccCCCC
Q 002010 397 FIGPIPEELGQCKSLTKIRFSKNYLNGTI 425 (982)
Q Consensus 397 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 425 (982)
+.+. ..+..+++|+.|+|++|++.+..
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 7653 34677777777777777776543
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.3e-18 Score=188.40 Aligned_cols=107 Identities=23% Similarity=0.373 Sum_probs=58.4
Q ss_pred ccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccc
Q 002010 476 IGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLS 555 (982)
Q Consensus 476 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 555 (982)
+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..++.+++|+.|+|++|++++..| +..+++|+
T Consensus 108 l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 181 (291)
T 1h6t_A 108 LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181 (291)
T ss_dssp GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccC
Confidence 44555555555555555432 2344555555555555555533 345555666666666666654333 55566666
Q ss_pred eEEcccccccccCccccccccccceecccCCcccc
Q 002010 556 ILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIG 590 (982)
Q Consensus 556 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 590 (982)
.|+|++|+|++ +| .+..+++|+.|++++|+++.
T Consensus 182 ~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 182 NLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred EEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 66666666653 23 25556666666666666554
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.2e-18 Score=180.34 Aligned_cols=155 Identities=22% Similarity=0.252 Sum_probs=137.7
Q ss_pred cEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCC
Q 002010 459 NQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRN 538 (982)
Q Consensus 459 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 538 (982)
+.+++++|+++ .+|..+. ++|+.|++++|+|++..+..+..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56888888888 4565543 68999999999999777778999999999999999999888999999999999999999
Q ss_pred cccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCC-CccccccccccccCCcCcccCC
Q 002010 539 SLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS-GGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 539 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~-~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+. ...+.++....+.+||+.|++.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 99976667789999999999999999999999999999999999999999988775 3346677888899999999654
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=7.8e-21 Score=224.16 Aligned_cols=204 Identities=19% Similarity=0.204 Sum_probs=169.9
Q ss_pred cCCCcccEEEeccccccccCCccccCccccceeeccccc-------------ccccCCccccCCCCCCEEE-ccCCccCC
Q 002010 358 GRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNF-------------FIGPIPEELGQCKSLTKIR-FSKNYLNG 423 (982)
Q Consensus 358 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~-------------~~~~~~~~l~~l~~L~~L~-Ls~N~l~~ 423 (982)
..++.|+.|+|++|+++ .+|..+..+++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56778889999999997 788889999999999987775 4556666667777777776 566544
Q ss_pred CCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccc
Q 002010 424 TIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNL 503 (982)
Q Consensus 424 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 503 (982)
..|..+.+++|.++...+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..+..+
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred ---------chhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 245566677777764332 359999999999996 566 999999999999999999 889999999
Q ss_pred cccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCC-CcccccccccceEEcccccccccCccc---cccccccc
Q 002010 504 KMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKI-PPGISKLIDLSILNLSRNGITGSIPNE---MRNMMSLT 579 (982)
Q Consensus 504 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---l~~l~~L~ 579 (982)
++|++|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..|+.+++|+.|+|++|+|++.+|.. +..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 999999999999996 67 8999999999999999999887 999999999999999999999776632 34588999
Q ss_pred eecc
Q 002010 580 TLDL 583 (982)
Q Consensus 580 ~L~L 583 (982)
.||+
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 8875
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=4.5e-18 Score=175.90 Aligned_cols=154 Identities=22% Similarity=0.203 Sum_probs=121.4
Q ss_pred EEEccCCccCCCCCccccCCCccccccCCCccccccCCc-ccc-cCCccEEEeeccccCCCCchhccCCCCcceeeeccc
Q 002010 413 KIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPE-KMS-GASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNN 490 (982)
Q Consensus 413 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~-~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N 490 (982)
.+++++|.++ .+|..+. +.+++|++++|.+++..+. .+. ..+|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555554 3444332 2234555555555554332 222 257788888888888777788999999999999999
Q ss_pred cccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCc
Q 002010 491 RLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIP 569 (982)
Q Consensus 491 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 569 (982)
++++..+..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.++...+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9998777788899999999999999998889999999999999999999998889999999999999999999986544
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1.7e-18 Score=175.07 Aligned_cols=155 Identities=20% Similarity=0.216 Sum_probs=112.7
Q ss_pred cEEEeeccccCCCCchhccCCCCcceeeeccccccCCCcc-ccccccccceeeeeccccCCCCCcccccccCCCeeeCCC
Q 002010 459 NQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPV-ESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSR 537 (982)
Q Consensus 459 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 537 (982)
+.+++++|+++ .+|..+.. +|++|++++|++++..+. .+..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 45554432 778888888888755443 367788888888888888877788888888888888888
Q ss_pred CcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCCCccccccccccccCCcCcccCC
Q 002010 538 NSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
|+|++..|..|.++++|+.|+|++|+|++.+|..+..+++|++|+|++|++++..+.......+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 8888777777888888888888888888888888888888888888888888776632211223333455666667655
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.1e-18 Score=212.47 Aligned_cols=144 Identities=22% Similarity=0.277 Sum_probs=75.9
Q ss_pred cCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCC
Q 002010 400 PIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNL 479 (982)
Q Consensus 400 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l 479 (982)
..+..+..++.|+.|+|++|.+. .+|..++.+++|++|+|++|.|+ .+|..|+++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~------------------------~lp~~~~~l 269 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT------------------------ELPAEIKNL 269 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS------------------------CCCGGGGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc------------------------ccChhhhCC
Confidence 44566666777777777777776 55655555555555555555444 344445555
Q ss_pred CCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccc-cceEE
Q 002010 480 PSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLID-LSILN 558 (982)
Q Consensus 480 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~ 558 (982)
++|++|+|++|+|+ .+|..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~ 347 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHh
Confidence 55555555555555 44555555555555555555554 44555555555555555555555555555544321 12345
Q ss_pred cccccccccCcc
Q 002010 559 LSRNGITGSIPN 570 (982)
Q Consensus 559 Ls~N~l~~~~p~ 570 (982)
|++|.+++.+|.
T Consensus 348 l~~N~l~~~~p~ 359 (727)
T 4b8c_D 348 LRDNRPEIPLPH 359 (727)
T ss_dssp HHHCCCCCCCCC
T ss_pred hccCcccCcCcc
Confidence 555555555554
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=3.6e-18 Score=181.84 Aligned_cols=167 Identities=16% Similarity=0.210 Sum_probs=77.9
Q ss_pred ccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCC
Q 002010 363 LLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDD 442 (982)
Q Consensus 363 L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 442 (982)
+..+++++|.+++. + .+..+++|+.|++++|.+.. ++ .+..+++|++|++++|++++..+ +..+++|++|++++
T Consensus 21 l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 33444444444322 1 23344444444444444432 22 34555555555555555553322 44455444444444
Q ss_pred ccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCc
Q 002010 443 NLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPY 522 (982)
Q Consensus 443 N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 522 (982)
|++++..+ ... .+|+.|++++|++++. + .+..+++|++|+|++|+|++. +
T Consensus 95 N~l~~l~~-~~~-~~L~~L~L~~N~l~~~-------------------------~-~l~~l~~L~~L~Ls~N~i~~~-~- 144 (263)
T 1xeu_A 95 NRLKNLNG-IPS-ACLSRLFLDNNELRDT-------------------------D-SLIHLKNLEILSIRNNKLKSI-V- 144 (263)
T ss_dssp SCCSCCTT-CCC-SSCCEEECCSSCCSBS-------------------------G-GGTTCTTCCEEECTTSCCCBC-G-
T ss_pred CccCCcCc-ccc-CcccEEEccCCccCCC-------------------------h-hhcCcccccEEECCCCcCCCC-h-
Confidence 44443211 111 3444444444444432 1 244444455555555555432 2
Q ss_pred ccccccCCCeeeCCCCcccCCCCcccccccccceEEccccccccc
Q 002010 523 SISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGS 567 (982)
Q Consensus 523 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 567 (982)
.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 145 ~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 355555555555555555543 4455566666666666666543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.2e-17 Score=169.63 Aligned_cols=155 Identities=21% Similarity=0.265 Sum_probs=115.4
Q ss_pred ccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcce
Q 002010 405 LGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNI 484 (982)
Q Consensus 405 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 484 (982)
.+.+++|++|++++|.++ .+| .+..++ +|++|++++|.++. +..+..+++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~-----------------------~L~~L~l~~n~~~~--~~~l~~l~~L~~ 92 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAH-----------------------NIKDLTINNIHATN--YNPISGLSNLER 92 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCT-----------------------TCSEEEEESCCCSC--CGGGTTCTTCCE
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCC-----------------------CCCEEEccCCCCCc--chhhhcCCCCCE
Confidence 356677888888888777 444 444444 45666666665542 246778888888
Q ss_pred eeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCc-ccCCCCcccccccccceEEccccc
Q 002010 485 LSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNS-LYGKIPPGISKLIDLSILNLSRNG 563 (982)
Q Consensus 485 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 563 (982)
|++++|++++..|..+..+++|++|++++|++++..|..++.+++|+.|+|++|. ++ .+| .+..+++|+.|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 8888888887777788888888888888888887778888888888888888887 54 555 68888888888888888
Q ss_pred ccccCccccccccccceecccCCcccc
Q 002010 564 ITGSIPNEMRNMMSLTTLDLSYNNLIG 590 (982)
Q Consensus 564 l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 590 (982)
+++ ++ .+..+++|++|++++|++.+
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 885 44 68888888999998888754
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=2.2e-18 Score=190.37 Aligned_cols=295 Identities=14% Similarity=0.051 Sum_probs=155.1
Q ss_pred cccCCcCccc--cccccEEEeccCCCCCCCChhhhh-hcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCC
Q 002010 84 FGSIPPEIGL--LTKLVNLTISNVNLTGRLPSEMAL-LTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPL 160 (982)
Q Consensus 84 ~g~~~~~i~~--l~~L~~L~l~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 160 (982)
.|.++..++. +.+++.|.++++ +.+.-...+.. +++|++|||++|++...... ...++.++.+.+..|.+.
T Consensus 12 ~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~--~~~~~~~~~~~~~~~~I~--- 85 (329)
T 3sb4_A 12 PGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGK--AGTYPNGKFYIYMANFVP--- 85 (329)
T ss_dssp TTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEES--SSSSGGGCCEEECTTEEC---
T ss_pred CCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCc--cccccccccccccccccC---
Confidence 4445555554 778888888864 22111123444 67799999999888710000 001122344444444332
Q ss_pred chhccc--------cccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccc---cc
Q 002010 161 PVEIAS--------LKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFN---TY 229 (982)
Q Consensus 161 p~~l~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n---~~ 229 (982)
+..|.+ +++|++|+|.+ .++...+.+|.++++|+.|++.+|.+....+.+|.++.++..+..+... ..
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 233444 66666666665 5555555556666666666666665555555555555544444333211 01
Q ss_pred cccCCCCCCCCCCCC-EEecccCcCcccCchhh----cCCCccceeecccccCCCCCCccc-cCCCCCCEEEeeCCcccC
Q 002010 230 TGGIPPGFGALTQLQ-VLDMASCNISGEIPTSL----SRLKLLHSLFLQMNKLTGHIPPQL-SGLISLKSLDLSLNYLTG 303 (982)
Q Consensus 230 ~~~~p~~~~~l~~L~-~L~L~~n~l~~~~~~~l----~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~Ls~N~l~~ 303 (982)
...-...|.++.+|+ .+.+.... .++..+ -...+++.+.+.++-.. .....+ ..+++|+.|+|++|+++.
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~ 240 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATT 240 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCE
T ss_pred ccccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcce
Confidence 111122344455555 34443221 111111 12344455555443211 111111 125666666666666665
Q ss_pred cCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCcc-EEEccCCCcccccCccccCCCcccEEEeccccccccCCcccc
Q 002010 304 EIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLE-VLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLC 382 (982)
Q Consensus 304 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 382 (982)
..+.+|.++++|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ .++...+.+|..+.+|+.|+++.|+++...+..|.
T Consensus 241 I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 241 IPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred ecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 55556666666666666665 5555556666676776 777666 55555566677777777777777777666666677
Q ss_pred Cccccceee
Q 002010 383 KGGKLKSLI 391 (982)
Q Consensus 383 ~~~~L~~L~ 391 (982)
++++|+.++
T Consensus 319 ~~~~L~~ly 327 (329)
T 3sb4_A 319 NGVPSKLIY 327 (329)
T ss_dssp TTCCCCEEE
T ss_pred CCcchhhhc
Confidence 777776665
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=2.2e-17 Score=167.65 Aligned_cols=156 Identities=17% Similarity=0.243 Sum_probs=122.5
Q ss_pred cccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCcc
Q 002010 380 DLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLN 459 (982)
Q Consensus 380 ~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~ 459 (982)
....+++|++|++++|.+. .+| .+..+++|++|++++|.++ .+..+..++ +|+
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~-----------------------~L~ 91 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLS-----------------------NLE 91 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCT-----------------------TCC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCC-----------------------CCC
Confidence 3467889999999999998 455 6999999999999999765 223444443 566
Q ss_pred EEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccc-cCCCCCcccccccCCCeeeCCCC
Q 002010 460 QLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNN-ISGEIPYSISQCHSLTSVDLSRN 538 (982)
Q Consensus 460 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N 538 (982)
+|++++|++++..+..++.+++|++|++++|++++..|..+..+++|++|++++|+ ++ .+| .+..+++|+.|++++|
T Consensus 92 ~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFD 169 (197)
T ss_dssp EEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTB
T ss_pred EEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCC
Confidence 67777777776677778888888888888888887778888888888999999888 55 455 6888999999999999
Q ss_pred cccCCCCcccccccccceEEcccccccc
Q 002010 539 SLYGKIPPGISKLIDLSILNLSRNGITG 566 (982)
Q Consensus 539 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 566 (982)
++++ ++ .+..+++|+.|++++|+|.+
T Consensus 170 ~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 170 GVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 9985 44 78899999999999998864
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.6e-17 Score=176.89 Aligned_cols=172 Identities=16% Similarity=0.247 Sum_probs=136.0
Q ss_pred CccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEE
Q 002010 383 KGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLK 462 (982)
Q Consensus 383 ~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~ 462 (982)
.+.++..+++++|.+.+.. .+..+++|++|++++|.++ .+| .+..+ .+|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l-----------------------~~L~~L~ 69 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFF-----------------------TNLKELH 69 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGC-----------------------TTCCEEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhC-----------------------CCCCEEE
Confidence 3556677777777776443 4667777777777777776 333 33333 4566677
Q ss_pred eeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccC
Q 002010 463 VANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYG 542 (982)
Q Consensus 463 L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 542 (982)
+++|+|++..+ +..+++|++|++++|++++ +|.... ++|++|+|++|+|++. + .+..+++|+.|+|++|+|++
T Consensus 70 L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 70 LSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp CCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCB
T ss_pred CCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCC
Confidence 77777775544 8899999999999999985 443333 9999999999999964 3 69999999999999999986
Q ss_pred CCCcccccccccceEEcccccccccCccccccccccceecccCCccccCC
Q 002010 543 KIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNI 592 (982)
Q Consensus 543 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 592 (982)
. | .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++..
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred C-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 4 4 699999999999999999976 67999999999999999998763
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=2.1e-17 Score=175.37 Aligned_cols=137 Identities=21% Similarity=0.173 Sum_probs=106.3
Q ss_pred cccccccccccceEEEEEEe-CCCcE--EEEEEeccCCCCC-----------------------chhhHHHHHHHHhcCC
Q 002010 694 LKDENIIGKGGAGIVYRGSM-PDGID--VAIKRLVGRGTGG-----------------------NDHGFLAEIQTLGRIR 747 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~ 747 (982)
|+..+.||+|+||.||+|.. .+|+. ||||+++...... ....+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999976 68888 9999874331110 0125788999999998
Q ss_pred CCcc--cceEeEEEcCCccEEEEeccCC-C----CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCcEEecC
Q 002010 748 HRNI--VRLLGYVSNRDTNLLLYEYMPN-G----SLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLH-HDCSPLIIHRD 819 (982)
Q Consensus 748 h~ni--v~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivHrD 819 (982)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.|++||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8764 334432 467999999942 3 77776532 234567789999999999999 888 99999
Q ss_pred CCCCcEEEcCCCCEEEeccccchhc
Q 002010 820 VKSNNILLDSDFEAHVADFGLAKFL 844 (982)
Q Consensus 820 lkp~Nill~~~~~~kl~DfG~a~~~ 844 (982)
|||+||+++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999988 9999999999754
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=6.2e-17 Score=163.49 Aligned_cols=136 Identities=22% Similarity=0.235 Sum_probs=110.6
Q ss_pred CccEEEeeccccCCCCch-hccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeC
Q 002010 457 SLNQLKVANNNITGKIPA-AIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDL 535 (982)
Q Consensus 457 ~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (982)
.+++|++++|+|++..+. .|+.+++|++|+|++|+|++..|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 677888888888866654 5889999999999999999888889999999999999999999888888999999999999
Q ss_pred CCCcccCCCCcccccccccceEEcccccccccCcc-ccccccccceecccCCccccCCCC
Q 002010 536 SRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPN-EMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 536 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
++|+|++.+|..|..+++|+.|+|++|.+++..+. ++. ..++...+.++......|.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCSST
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCCCCh
Confidence 99999999999999999999999999999976552 111 1233344555555554453
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.5e-17 Score=183.80 Aligned_cols=124 Identities=15% Similarity=0.072 Sum_probs=90.4
Q ss_pred CccEEEeeccccCCCCchhc-cCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCC-eee
Q 002010 457 SLNQLKVANNNITGKIPAAI-GNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLT-SVD 534 (982)
Q Consensus 457 ~L~~L~L~~N~i~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~ 534 (982)
.+..+.+.++-.. .....+ ..+++|+.|+|++|+++...+..|.++++|++|+|++| ++.+.+..|.++++|+ .|+
T Consensus 203 ~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 203 DINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp GCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 4455555544222 111222 23678888888888887555556778888888888887 7766677788888888 888
Q ss_pred CCCCcccCCCCcccccccccceEEcccccccccCccccccccccceecc
Q 002010 535 LSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDL 583 (982)
Q Consensus 535 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 583 (982)
+.+ .++.+.+.+|.++++|+.|+|++|+++...+.+|.++++|+.++.
T Consensus 281 l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 281 LPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ecc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888 676566788888888888888888888777778888888888763
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=161.68 Aligned_cols=131 Identities=26% Similarity=0.316 Sum_probs=111.2
Q ss_pred cEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCC
Q 002010 459 NQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRN 538 (982)
Q Consensus 459 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 538 (982)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56777888877 4555442 57889999999997 67788888999999999999999888888999999999999999
Q ss_pred cccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCC
Q 002010 539 SLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 539 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9998888889999999999999999997777788999999999999999886543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.4e-16 Score=155.63 Aligned_cols=134 Identities=25% Similarity=0.219 Sum_probs=116.7
Q ss_pred CCccEEEeeccccC-CCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeee
Q 002010 456 ASLNQLKVANNNIT-GKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVD 534 (982)
Q Consensus 456 ~~L~~L~L~~N~i~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 534 (982)
..|+.|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57888999999987 67888889999999999999999865 6788899999999999999987888888899999999
Q ss_pred CCCCcccCCC-CcccccccccceEEcccccccccCc---cccccccccceecccCCccccC
Q 002010 535 LSRNSLYGKI-PPGISKLIDLSILNLSRNGITGSIP---NEMRNMMSLTTLDLSYNNLIGN 591 (982)
Q Consensus 535 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~Ls~N~l~~~ 591 (982)
|++|.+++.. +..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999998643 2789999999999999999996655 4789999999999999988743
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=7.8e-16 Score=153.30 Aligned_cols=134 Identities=22% Similarity=0.205 Sum_probs=108.4
Q ss_pred ccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCC
Q 002010 458 LNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSR 537 (982)
Q Consensus 458 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 537 (982)
.+.+++++|+++. +|..+ .++|+.|++++|++++..+..+..+++|++|++++|+|++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4567777777773 44333 36888888888888866666677888888888888888877777788899999999999
Q ss_pred CcccCCCCcccccccccceEEcccccccccCccccccccccceecccCCccccCCCC
Q 002010 538 NSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS 594 (982)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 594 (982)
|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999877777788899999999999999876666678899999999999999887764
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.5e-16 Score=152.06 Aligned_cols=128 Identities=25% Similarity=0.310 Sum_probs=113.4
Q ss_pred CCccEEEeeccccC-CCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeee
Q 002010 456 ASLNQLKVANNNIT-GKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVD 534 (982)
Q Consensus 456 ~~L~~L~L~~N~i~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 534 (982)
.+++.|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|++|++++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57889999999998 78888889999999999999999865 6788899999999999999987888888899999999
Q ss_pred CCCCcccCC-CCcccccccccceEEcccccccccCc---cccccccccceecccC
Q 002010 535 LSRNSLYGK-IPPGISKLIDLSILNLSRNGITGSIP---NEMRNMMSLTTLDLSY 585 (982)
Q Consensus 535 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~Ls~ 585 (982)
+++|++++. .|..+..+++|+.|++++|++++..+ ..+..+++|++||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999864 34889999999999999999997666 5789999999999874
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1e-15 Score=152.50 Aligned_cols=139 Identities=19% Similarity=0.285 Sum_probs=118.9
Q ss_pred CCCCCccceeeeCCCCCEEEEEeccCCccccCCcCccccccccEEEeccCCCCCCCChhhhhhcccceeeccCCcccccc
Q 002010 56 PSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNF 135 (982)
Q Consensus 56 ~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~i~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 135 (982)
..|.|+|.+|.|+..+ ...+|..+ .++|++|++++|++++..+..+..+++|++|+|++|.+++ +
T Consensus 3 ~~C~C~~~~l~~~~~~------------l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~ 67 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKG------------LTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-L 67 (177)
T ss_dssp TTCEEETTEEECCSSC------------CSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-C
T ss_pred CCCEeCCCEEEecCCC------------CccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE-e
Confidence 3467999999997543 12355433 3689999999999998777788999999999999999984 5
Q ss_pred chhhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchh
Q 002010 136 AGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVP 209 (982)
Q Consensus 136 ~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~ 209 (982)
+...+.++++|++|++++|++++..+..++.+++|++|+|++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 55677899999999999999998777788999999999999999997777778999999999999999987665
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=1.6e-15 Score=152.94 Aligned_cols=130 Identities=22% Similarity=0.269 Sum_probs=116.6
Q ss_pred ceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccc
Q 002010 483 NILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRN 562 (982)
Q Consensus 483 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 562 (982)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 68999999998 6787654 68999999999999 78899999999999999999999888889999999999999999
Q ss_pred cccccCccccccccccceecccCCccccCCCC-CccccccccccccCCcCcccCC
Q 002010 563 GITGSIPNEMRNMMSLTTLDLSYNNLIGNIPS-GGQFLAFNETSFIGNPNLCLLR 616 (982)
Q Consensus 563 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~-~~~~~~~~~~~~~~n~~~c~~~ 616 (982)
+|++..|..|..+++|++|+|++|++++..+. ...+..+....+.+|||.|++.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99998889999999999999999999976664 3346778888899999999764
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=1.4e-15 Score=149.96 Aligned_cols=133 Identities=24% Similarity=0.186 Sum_probs=112.8
Q ss_pred CCCCCEEecccCcCc-ccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 240 LTQLQVLDMASCNIS-GEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 240 l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
.++|++|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 378999999999998 77888889999999999999999966 778899999999999999998788888889999999
Q ss_pred hhccCCCCCCC-CCcCCCCCCccEEEccCCCcccccC---ccccCCCcccEEEecccccc
Q 002010 319 QLFKNNLRGPI-PSFLGDFPNLEVLQVWGNNFTFELP---ENLGRNGKLLILDVTSNHLT 374 (982)
Q Consensus 319 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~ 374 (982)
++++|++++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999998643 2678888888888888888886544 46777888888888888776
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=4.6e-16 Score=170.61 Aligned_cols=138 Identities=10% Similarity=0.069 Sum_probs=98.6
Q ss_pred cccccccccccceEEEEEEeCCCcEEEEEEeccCCCC-------------Cchhh--------HHHHHHHHhcCCCCccc
Q 002010 694 LKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTG-------------GNDHG--------FLAEIQTLGRIRHRNIV 752 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~--------~~~E~~~l~~l~h~niv 752 (982)
|++.+.||+|++|.||+|..++|+.||||+++..... ..... ..+|...+.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7888999999999999999889999999987432110 00111 12355555555333321
Q ss_pred ceEeEEEcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCC-
Q 002010 753 RLLGYVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDF- 831 (982)
Q Consensus 753 ~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~- 831 (982)
+...+. ....++||||++|++|.++... +....++.|++.++.+||+.| ||||||||.|||+++++
T Consensus 177 -vp~p~~-~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 -VPEPIA-QSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp -CCCEEE-EETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred -CCeeee-ccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence 111111 1345899999999888765421 234568899999999999998 99999999999998776
Q ss_pred ---------CEEEeccccchhc
Q 002010 832 ---------EAHVADFGLAKFL 844 (982)
Q Consensus 832 ---------~~kl~DfG~a~~~ 844 (982)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999977643
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=4e-14 Score=159.49 Aligned_cols=264 Identities=9% Similarity=0.039 Sum_probs=179.7
Q ss_pred CCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEe
Q 002010 289 ISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDV 368 (982)
Q Consensus 289 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 368 (982)
..++.+.+.+ .++.+...+|.+. +|+.+.+..| ++.+...+|.++ +|+.+.+.+ .++.....+|..+.+|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 5667777764 3554566677764 6888887666 665666677774 688888875 566566677777788888888
Q ss_pred ccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCcccccc
Q 002010 369 TSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGE 448 (982)
Q Consensus 369 ~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 448 (982)
++|+++......|. ..+|+.+.+.++ +......+|.+|++|+.+++..| + +..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l------------------------~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-V------------------------STI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-C------------------------CEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-c------------------------cCc
Confidence 77777744333443 466666666533 55555556666666666666543 2 222
Q ss_pred CCcccccCCccEEEeeccccCCCCchhccCCCCcceeeecccccc-----CCCccccccccccceeeeeccccCCCCCcc
Q 002010 449 LPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLE-----GEIPVESFNLKMITSINISDNNISGEIPYS 523 (982)
Q Consensus 449 ~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 523 (982)
....|...+|+.+.+ .|.++...+.+|.++++|+.+++.+|.+. ...+..|.++++|+.++|. |.++.+-...
T Consensus 241 ~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~a 318 (401)
T 4fdw_A 241 GQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGL 318 (401)
T ss_dssp CTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTT
T ss_pred cccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhh
Confidence 333444456777887 45566677788889999999999888764 2345567778888888888 4476566677
Q ss_pred cccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCcccccccc-ccceecccCCcc
Q 002010 524 ISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMM-SLTTLDLSYNNL 588 (982)
Q Consensus 524 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l 588 (982)
|.+|++|+.++|..| ++..-+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..|.+
T Consensus 319 F~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 319 LGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 888888888888555 665666778888 888888888888766667777774 667777766654
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=2.2e-15 Score=145.36 Aligned_cols=128 Identities=23% Similarity=0.177 Sum_probs=101.6
Q ss_pred CCCCCEEecccCcCc-ccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhh
Q 002010 240 LTQLQVLDMASCNIS-GEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLL 318 (982)
Q Consensus 240 l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 318 (982)
.++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478899999999998 77888888899999999999999866 678888999999999999987788877778888888
Q ss_pred hhccCCCCCC-CCCcCCCCCCccEEEccCCCcccccC---ccccCCCcccEEEec
Q 002010 319 QLFKNNLRGP-IPSFLGDFPNLEVLQVWGNNFTFELP---ENLGRNGKLLILDVT 369 (982)
Q Consensus 319 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~ 369 (982)
++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888763 34667777778888877777775544 356666667666654
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=3.9e-15 Score=148.05 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=107.8
Q ss_pred cccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCe
Q 002010 453 MSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTS 532 (982)
Q Consensus 453 ~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 532 (982)
....+|+.|++++|+++. +|......++|++|++++|++++. ..+..+++|++|+|++|+|++..+..|..+++|+.
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 344678888888888884 454333344899999999999864 57888999999999999999665566689999999
Q ss_pred eeCCCCcccCCCCc--ccccccccceEEcccccccccCccc----cccccccceecccCCcccc
Q 002010 533 VDLSRNSLYGKIPP--GISKLIDLSILNLSRNGITGSIPNE----MRNMMSLTTLDLSYNNLIG 590 (982)
Q Consensus 533 L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~Ls~N~l~~ 590 (982)
|+|++|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|++||+++|....
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999996 5665 7899999999999999998 55654 8999999999999998764
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.54 E-value=1.1e-13 Score=156.04 Aligned_cols=241 Identities=14% Similarity=0.102 Sum_probs=107.0
Q ss_pred CCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhc
Q 002010 242 QLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLF 321 (982)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 321 (982)
+|+.+.+..+ ++.....+|.+ .+|+++.+.. .++...+.+|.++++|+.+++++|.++.....+|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 4555554433 43333344444 2355555543 34433344455555555555555554433333343 2444444444
Q ss_pred cCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeeccccccc---
Q 002010 322 KNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFI--- 398 (982)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~--- 398 (982)
.+ ++.+....|.++++|+.+++..| ++.....+|.. .+|+.+++ .+.++......|..+.+|+.+.+.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 22 33334444444555555554432 23222333333 34444444 22233233333444444444444333322
Q ss_pred --ccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhc
Q 002010 399 --GPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAI 476 (982)
Q Consensus 399 --~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~ 476 (982)
...+.+|.+|++|+.+++.+ .++......|.++ .+|+.+.+..| ++...+.+|
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c-----------------------~~L~~l~lp~~-l~~I~~~aF 342 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGN-----------------------RKVTQLTIPAN-VTQINFSAF 342 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTC-----------------------CSCCEEEECTT-CCEECTTSS
T ss_pred ccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCC-----------------------CCccEEEECcc-ccEEcHHhC
Confidence 23334444444444444442 2332222233333 44555555332 444445566
Q ss_pred cCCCCcceeeeccccccCCCccccccc-cccceeeeecccc
Q 002010 477 GNLPSLNILSLQNNRLEGEIPVESFNL-KMITSINISDNNI 516 (982)
Q Consensus 477 ~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l 516 (982)
.++ +|+.+++++|.+....+..|..+ ..+..|.+..+.+
T Consensus 343 ~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 343 NNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 666 66666666666654444444444 2556666666554
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=3.6e-16 Score=158.84 Aligned_cols=127 Identities=22% Similarity=0.256 Sum_probs=83.1
Q ss_pred CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeC
Q 002010 456 ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDL 535 (982)
Q Consensus 456 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (982)
..|++|++++|++++ +| .+..+++|++|++++|+++ .+|..+..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 355666666666664 44 6666777777777777776 556666666777777777777764 34 5667777777777
Q ss_pred CCCcccCCCC-cccccccccceEEcccccccccCccc----------cccccccceecccCCccc
Q 002010 536 SRNSLYGKIP-PGISKLIDLSILNLSRNGITGSIPNE----------MRNMMSLTTLDLSYNNLI 589 (982)
Q Consensus 536 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------l~~l~~L~~L~Ls~N~l~ 589 (982)
++|++++..+ ..+..+++|+.|++++|.+++.+|.. +..+++|+.|| +|+++
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777764322 35677777777777777776655542 66777777776 55554
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=3.5e-14 Score=139.98 Aligned_cols=109 Identities=22% Similarity=0.189 Sum_probs=77.6
Q ss_pred cceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccc
Q 002010 482 LNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSR 561 (982)
Q Consensus 482 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 561 (982)
.+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 355666666665 4555442 6677777777777766677777777777777777777766666677777777777777
Q ss_pred ccccccCccccccccccceecccCCccccCCC
Q 002010 562 NGITGSIPNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 562 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
|+|++..+..|..+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77776666667777778888888887776655
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=4.5e-13 Score=151.64 Aligned_cols=310 Identities=15% Similarity=0.101 Sum_probs=152.2
Q ss_pred CCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccch
Q 002010 236 GFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNL 315 (982)
Q Consensus 236 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 315 (982)
+|.++++|+.+.+.. .++.....+|.++++|+.+++..+ ++......|.++.+|+.+.+..+ +......+|.....+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 455555555555542 244344445555555555555433 33333344555555555444433 222333334333222
Q ss_pred hhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccc
Q 002010 316 TLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQN 395 (982)
Q Consensus 316 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N 395 (982)
+.... +.+.......|.++.+|+.+.+.++. .. .....|..+.+|+.+.+..|
T Consensus 143 ~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~~-~~------------------------I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 143 EITIP--EGVTVIGDEAFATCESLEYVSLPDSM-ET------------------------LHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp EEECC--TTCCEECTTTTTTCTTCCEEECCTTC-CE------------------------ECTTTTTTCTTCCBCCCCTT
T ss_pred ccccC--ccccccchhhhcccCCCcEEecCCcc-ce------------------------eccccccCCCCceEEEcCCC
Confidence 21111 11111223344444455555444332 21 22333444444444444433
Q ss_pred cccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccc-cCCccEEEeeccccCCCCch
Q 002010 396 FFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMS-GASLNQLKVANNNITGKIPA 474 (982)
Q Consensus 396 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~L~~N~i~~~~p~ 474 (982)
+......+|.++..|+.+.+..+... +.........|+.+.+..+. +......+. ...++.+.+..+... ....
T Consensus 196 -~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~ 270 (394)
T 4fs7_A 196 -LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGS 270 (394)
T ss_dssp -CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSC
T ss_pred -ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eecc
Confidence 23333444555555555544443321 12222223344444433221 111112222 245666666555433 4555
Q ss_pred hccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCccccccccc
Q 002010 475 AIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDL 554 (982)
Q Consensus 475 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 554 (982)
.|..+..++.+....+.+. ...+..+.+|+.+.+.++ ++.+-...|.++++|+.++|..+ ++..-..+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 6666777777666665432 234556677777777654 55444566777777777777644 554445667777777
Q ss_pred ceEEcccccccccCccccccccccceecccCC
Q 002010 555 SILNLSRNGITGSIPNEMRNMMSLTTLDLSYN 586 (982)
Q Consensus 555 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 586 (982)
+.+++..| ++..-..+|.++.+|+.+++..|
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 77777665 65555667777777777776543
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=7.1e-13 Score=150.06 Aligned_cols=335 Identities=13% Similarity=0.076 Sum_probs=234.0
Q ss_pred cccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhcCCCccceeecccccCCCCCCc
Q 002010 204 LNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPP 283 (982)
Q Consensus 204 i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 283 (982)
++.....+|.++.+|+++.+. +.++..-..+|.++++|+.+++..+ ++......|.++++|+.+.+..+ +......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp--~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIP--STVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECC--TTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred EeEhHHHHhhCCCCceEEEeC--CCccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 344556789999999999886 3455444567999999999999765 66566778999999999888755 4445566
Q ss_pred cccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcc
Q 002010 284 QLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKL 363 (982)
Q Consensus 284 ~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 363 (982)
+|.++..+....... +......+|..+++|+.+.+.++. .......|.++.+|+.+.+..| ++.....++..+..|
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 777765444333322 232455789999999999997654 4366778999999999999876 555566778888888
Q ss_pred cEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCc
Q 002010 364 LILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDN 443 (982)
Q Consensus 364 ~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 443 (982)
+.+.+..+... +........+|+.+.+..+ +.......+..+..|+.+.+..+... .....|.....
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~--------- 277 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSG--------- 277 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTT---------
T ss_pred ceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccc---------
Confidence 88887766543 2333444567777777543 33344566777777887777766443 33334444443
Q ss_pred cccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcc
Q 002010 444 LLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYS 523 (982)
Q Consensus 444 ~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 523 (982)
++.+....+.+ ....|..+.+|+.+.+.++ ++..-...|.++.+|+.+++.++ ++.+-..+
T Consensus 278 --------------l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 278 --------------LKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp --------------CCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred --------------cceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 34444433332 2346777788888888765 55344556777888888888754 66555778
Q ss_pred cccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCcccccccccccee
Q 002010 524 ISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTL 581 (982)
Q Consensus 524 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 581 (982)
|.++++|+.+++..| ++..-..+|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 999999999999877 66566788999999999999765 44 456778888888765
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=9.2e-14 Score=137.43 Aligned_cols=108 Identities=21% Similarity=0.204 Sum_probs=67.7
Q ss_pred ceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccc
Q 002010 483 NILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRN 562 (982)
Q Consensus 483 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 562 (982)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 4454443 56666666666666666666666666666666666666554455666667777777777
Q ss_pred cccccCccccccccccceecccCCccccCCC
Q 002010 563 GITGSIPNEMRNMMSLTTLDLSYNNLIGNIP 593 (982)
Q Consensus 563 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 593 (982)
+|++..+..|..+++|++|+|++|++....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7765555556667777777777776665443
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=3.2e-14 Score=141.33 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=102.3
Q ss_pred cccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcc
Q 002010 404 ELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLN 483 (982)
Q Consensus 404 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~ 483 (982)
.+.++.+|+.|++++|+++. +|. +..+. ++|++|++++|+|++. ..+..+++|+
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~----------------------~~L~~L~Ls~N~l~~~--~~l~~l~~L~ 67 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATL----------------------DQFDAIDFSDNEIRKL--DGFPLLRRLK 67 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGT----------------------TCCSEEECCSSCCCEE--CCCCCCSSCC
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcC----------------------CCCCEEECCCCCCCcc--cccccCCCCC
Confidence 45667788888888887773 332 22221 2566666666766654 5678888999
Q ss_pred eeeeccccccCCCccccccccccceeeeeccccCCCCCc--ccccccCCCeeeCCCCcccCCCCcc----cccccccceE
Q 002010 484 ILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPY--SISQCHSLTSVDLSRNSLYGKIPPG----ISKLIDLSIL 557 (982)
Q Consensus 484 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L 557 (982)
+|++++|++++..+..+..+++|++|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|
T Consensus 68 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 68 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp EEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred EEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 9999999998544444578899999999999996 4565 7889999999999999998 56664 8999999999
Q ss_pred Ecccccccc
Q 002010 558 NLSRNGITG 566 (982)
Q Consensus 558 ~Ls~N~l~~ 566 (982)
|+++|.+..
T Consensus 146 d~~~n~~~~ 154 (176)
T 1a9n_A 146 DFQKVKLKE 154 (176)
T ss_dssp TTEECCHHH
T ss_pred CCCcCCHHH
Confidence 999998874
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=7.7e-16 Score=156.37 Aligned_cols=155 Identities=19% Similarity=0.213 Sum_probs=109.3
Q ss_pred cCccccceeecccccccccCCc------cccCCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCccccc
Q 002010 382 CKGGKLKSLILMQNFFIGPIPE------ELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSG 455 (982)
Q Consensus 382 ~~~~~L~~L~l~~N~~~~~~~~------~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 455 (982)
.....++.++++.+.+.+..|. .+..+++|++|++++|++++ +| .+..+
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l----------------------- 69 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGM----------------------- 69 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHH-----------------------
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccC-----------------------
Confidence 3445566666666666665554 55556666666666666553 33 33333
Q ss_pred CCccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCC-cccccccCCCeee
Q 002010 456 ASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIP-YSISQCHSLTSVD 534 (982)
Q Consensus 456 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 534 (982)
.+|++|++++|+++ .+|..+..+++|++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|+
T Consensus 70 ~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp TTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred CCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 46777777777777 566677777888888888888875 45 57788888888888888885332 4678889999999
Q ss_pred CCCCcccCCCCcc----------cccccccceEEcccccccc
Q 002010 535 LSRNSLYGKIPPG----------ISKLIDLSILNLSRNGITG 566 (982)
Q Consensus 535 Ls~N~l~~~~p~~----------~~~l~~L~~L~Ls~N~l~~ 566 (982)
+++|.+++.+|.. +..+++|+.|| +|.++.
T Consensus 147 l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 147 LAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp ECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred ecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 9999998776653 78889999887 777763
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=3.5e-13 Score=132.79 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=91.7
Q ss_pred CccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCC
Q 002010 457 SLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLS 536 (982)
Q Consensus 457 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 536 (982)
+.+.+++++|+++. +|..+ .++|++|+|++|+|++..|..+..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35678888888874 55544 3788899999999988778888889999999999999997777788999999999999
Q ss_pred CCcccCCCCcccccccccceEEcccccccccC
Q 002010 537 RNSLYGKIPPGISKLIDLSILNLSRNGITGSI 568 (982)
Q Consensus 537 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 568 (982)
+|+|++..+..|..+++|+.|+|++|.++...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999777778999999999999999998543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3.5e-13 Score=133.23 Aligned_cols=106 Identities=20% Similarity=0.187 Sum_probs=88.8
Q ss_pred ccEEEeeccccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCC
Q 002010 458 LNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSR 537 (982)
Q Consensus 458 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 537 (982)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..+..+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 357788888886 5565553 7888999999999887788888899999999999999977677788999999999999
Q ss_pred CcccCCCCcccccccccceEEcccccccc
Q 002010 538 NSLYGKIPPGISKLIDLSILNLSRNGITG 566 (982)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 566 (982)
|+|++..+..|..+++|+.|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99997666679999999999999999984
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.37 E-value=3.3e-14 Score=158.67 Aligned_cols=170 Identities=16% Similarity=0.128 Sum_probs=89.9
Q ss_pred ccccEEEeccCCCCCCCChhhhhh-----cccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhcc----
Q 002010 95 TKLVNLTISNVNLTGRLPSEMALL-----TSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIA---- 165 (982)
Q Consensus 95 ~~L~~L~l~~n~l~~~~p~~l~~l-----~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~---- 165 (982)
+.|++|+|++|.++......+..+ .+|++|+|++|.+.+.....+...+++|++|+|++|+++......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777776665444444443 56666666666665443334444555666666666666544334432
Q ss_pred -ccccccEEeecCccccccc----CCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCC
Q 002010 166 -SLKSLRHLSFGGNYFTGKI----PQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGAL 240 (982)
Q Consensus 166 -~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l 240 (982)
..++|++|+|++|.|+... +..+..+++|++|+|++|.+++.....+. ..+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~---------------------~~L~~~ 210 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA---------------------AQLDRN 210 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH---------------------HHGGGC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH---------------------HHHhcC
Confidence 2355666666666665422 22334455666666666655433222211 112334
Q ss_pred CCCCEEecccCcCcccC----chhhcCCCccceeecccccCCCCCCccc
Q 002010 241 TQLQVLDMASCNISGEI----PTSLSRLKLLHSLFLQMNKLTGHIPPQL 285 (982)
Q Consensus 241 ~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~~~~l 285 (982)
++|++|+|++|.|++.. +..+...++|++|+|++|.|+......+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 45666666666665432 2233445566666666666654433333
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=2e-13 Score=152.29 Aligned_cols=187 Identities=17% Similarity=0.135 Sum_probs=86.8
Q ss_pred CCccEEeccCccccCCCchhcccc-----ccccEEeecCcccccccCCCcc-ccCcceEeeccCcccccchhhHHhhhhh
Q 002010 144 TELQVLDAYNNNFTGPLPVEIASL-----KSLRHLSFGGNYFTGKIPQSYS-EIQSLEYIGLNGIGLNGTVPAFLSRLKN 217 (982)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~n~i~~~~~~~l~~l~~ 217 (982)
+.|++|+|++|.++......+... ++|++|+|++|.++......+. .+++|++|+|++|.++......+...-
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L- 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL- 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH-
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH-
Confidence 344555555555543333333222 4555555555555443333322 244555555555555543333332210
Q ss_pred HHHHhhcccccccccCCCCCCCCCCCCEEecccCcCccc----CchhhcCCCccceeecccccCCCCC----CccccCCC
Q 002010 218 LREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGE----IPTSLSRLKLLHSLFLQMNKLTGHI----PPQLSGLI 289 (982)
Q Consensus 218 L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~----~~~l~~l~ 289 (982)
+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+... +..+...+
T Consensus 151 -~------------------~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 151 -L------------------HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp -H------------------STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred -H------------------hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 0 1124566666666666532 2233355566666666666655322 33344555
Q ss_pred CCCEEEeeCCcccCcC----chhhhcccchhhhhhccCCCCCCCCCcCCCC---C--CccEEE--ccCCCcc
Q 002010 290 SLKSLDLSLNYLTGEI----PESFAALKNLTLLQLFKNNLRGPIPSFLGDF---P--NLEVLQ--VWGNNFT 350 (982)
Q Consensus 290 ~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l---~--~L~~L~--L~~N~l~ 350 (982)
+|++|+|++|.|+... +..+...++|++|+|++|.|++.....+..+ . .|+.+. +..|.+.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 6666666666665422 2233344666666666666654332222211 1 266666 6666665
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=3.9e-12 Score=141.44 Aligned_cols=103 Identities=18% Similarity=0.178 Sum_probs=68.4
Q ss_pred EEEeecc-ccCCCCchhccCCCCcceeeecc-ccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCC
Q 002010 460 QLKVANN-NITGKIPAAIGNLPSLNILSLQN-NRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSR 537 (982)
Q Consensus 460 ~L~L~~N-~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 537 (982)
.++++++ +++ .+|. +..+++|+.|+|++ |+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 676 3555 77777777777775 777765556666777777777777777766666667777777777777
Q ss_pred CcccCCCCcccccccccceEEccccccc
Q 002010 538 NSLYGKIPPGISKLIDLSILNLSRNGIT 565 (982)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 565 (982)
|+|++..+..|..+. |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777654444455444 667777766665
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.1e-11 Score=137.81 Aligned_cols=132 Identities=16% Similarity=0.085 Sum_probs=93.5
Q ss_pred ceeeeccc-cccCCCccccccccccceeeeec-cccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcc
Q 002010 483 NILSLQNN-RLEGEIPVESFNLKMITSINISD-NNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLS 560 (982)
Q Consensus 483 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 560 (982)
..++.+++ +|+ .+|. +..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34677777 787 4777 88888888888885 88887777788888888888888888888778888888888888888
Q ss_pred cccccccCccccccccccceecccCCccccCCCCC--ccccccccccccCCcCcccCCC
Q 002010 561 RNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSG--GQFLAFNETSFIGNPNLCLLRN 617 (982)
Q Consensus 561 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~--~~~~~~~~~~~~~n~~~c~~~~ 617 (982)
+|+|++..+..|..+. |+.|+|++|+|.....-. .+|.......+..+...|..++
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 8888866666666665 888888888887653311 1122222223344556665543
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.21 E-value=4.4e-10 Score=127.03 Aligned_cols=310 Identities=14% Similarity=0.124 Sum_probs=185.9
Q ss_pred chhhcCCC-ccceeecccccCCCCCCccccCCCCCCEEEeeCCc---ccCcCchhhhcccchhhhhhccCCCCCCCCCcC
Q 002010 258 PTSLSRLK-LLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNY---LTGEIPESFAALKNLTLLQLFKNNLRGPIPSFL 333 (982)
Q Consensus 258 ~~~l~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~---l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 333 (982)
..+|.+.+ .|+++.+..+ ++.+...+|.++++|+.+.++.|. ++.....+|..+.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34455543 3666666533 444455566666666666666553 44444566666677776666544 443555667
Q ss_pred CCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccccCCccccCCCCCCE
Q 002010 334 GDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTK 413 (982)
Q Consensus 334 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~~~~~~l~~l~~L~~ 413 (982)
..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++......| ...+|+.+.+..+- ......++..+.+++.
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF-~~~~l~~i~ip~~~-~~i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAF-TGTALTQIHIPAKV-TRIGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTT-TTCCCSEEEECTTC-CEECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEeccccc-cccceeEEEECCcc-cccccchhhhccccce
Confidence 77777777777543 33344556667777777777654 332333333 33567777775543 3345566777888887
Q ss_pred EEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeeccccCCCCchhccCCCCcceeeecccccc
Q 002010 414 IRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLE 493 (982)
Q Consensus 414 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 493 (982)
.....+... .+...+..-...... ..........+..+.+. +.++.....+|.++.+|+.+.+.++..+
T Consensus 210 ~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~ 278 (394)
T 4gt6_A 210 ITSDSESYP-AIDNVLYEKSANGDY---------ALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS 278 (394)
T ss_dssp EEECCSSSC-BSSSCEEEECTTSCE---------EEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE
T ss_pred ecccccccc-cccceeecccccccc---------cccccccccccceEEcC-CcceEcccceeeecccccEEecccccce
Confidence 776665543 121111110000000 00000011223333332 2334345567888888888888766543
Q ss_pred CCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccccCccccc
Q 002010 494 GEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMR 573 (982)
Q Consensus 494 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 573 (982)
.....|.+++.|+.+.+. +.++......|.++.+|+.++|..+ ++.+-..+|.++.+|+.+.|..+ ++.+-..+|.
T Consensus 279 -I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 279 -IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp -ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred -ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 445567778888888886 4566556677888888998888765 55455677888888998888654 6656667888
Q ss_pred cccccceecccCCcc
Q 002010 574 NMMSLTTLDLSYNNL 588 (982)
Q Consensus 574 ~l~~L~~L~Ls~N~l 588 (982)
++++|+.+++.+|..
T Consensus 355 ~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 355 NCTALNNIEYSGSRS 369 (394)
T ss_dssp TCTTCCEEEESSCHH
T ss_pred CCCCCCEEEECCcee
Confidence 888998888887754
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.18 E-value=3.6e-10 Score=127.74 Aligned_cols=309 Identities=11% Similarity=0.081 Sum_probs=149.9
Q ss_pred CCEEecccCcCcccCchhhcCCCccceeeccccc---CCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhh
Q 002010 243 LQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNK---LTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQ 319 (982)
Q Consensus 243 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~---l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 319 (982)
|+.+.+..+ ++.....+|.++++|+.+.+..|. ++.....+|.++.+|+.+.+..+ ++.....+|..+.+|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 555555432 443444455555555555555442 33333344555555555544433 2323344455555555555
Q ss_pred hccCCCCCCCCCcCCCCCCccEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccc
Q 002010 320 LFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIG 399 (982)
Q Consensus 320 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~ 399 (982)
+..+ +.......|..+.+|+.+.+..+ ++.....+|. ..+|+.+.+..+-.. .....|..+.++.......+....
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 5432 22233445555555555555443 2222223332 244555555443222 333444455555554444333221
Q ss_pred cCCcccc-------------CCCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccccCCccEEEeecc
Q 002010 400 PIPEELG-------------QCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANN 466 (982)
Q Consensus 400 ~~~~~l~-------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N 466 (982)
.....+. ....+..+.+..+ ++..-...|.+. ..|+.+.+..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~~i~~~aF~~c-----------------------~~L~~i~lp~~ 275 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VARIETHAFDSC-----------------------AYLASVKMPDS 275 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EEEECTTTTTTC-----------------------SSCCEEECCTT
T ss_pred ccceeecccccccccccccccccccceEEcCCc-ceEcccceeeec-----------------------ccccEEecccc
Confidence 1111111 1112222222111 110111122222 34555555443
Q ss_pred ccCCCCchhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCc
Q 002010 467 NITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPP 546 (982)
Q Consensus 467 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 546 (982)
..+ .....|.++++|+.+.+. +.++......|.++.+|+.++|.++ ++.+-...|.++++|+.+.+..+ ++..-..
T Consensus 276 ~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~ 351 (394)
T 4gt6_A 276 VVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPES 351 (394)
T ss_dssp CCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGG
T ss_pred cce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHh
Confidence 332 455667777777777775 3454344455667778888888754 55455677888888888888655 5545567
Q ss_pred ccccccccceEEcccccccccCccccccccccceecccCCcc
Q 002010 547 GISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNL 588 (982)
Q Consensus 547 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 588 (982)
+|.++.+|+.+++.+|.... .++....+|+.+.+..|.+
T Consensus 352 aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 352 AFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp GGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred HhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 78888888888888876542 4567777888887766644
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.18 E-value=8.1e-11 Score=125.08 Aligned_cols=145 Identities=14% Similarity=0.089 Sum_probs=112.9
Q ss_pred HHHhhcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCcccceEeEEEcCCccEEE
Q 002010 689 DVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 689 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 767 (982)
...+.|+.....+.|+.+.||++.. .+..+++|+...... .....+.+|+.+++.+. +..+.++++++...+..|+|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 3456687777888899999999976 468999998854321 22346889999999884 67788899999888889999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 002010 768 YEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC------------------------------------ 811 (982)
Q Consensus 768 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 811 (982)
|||++|.++.+.+. +......++.+++++++.||+..
T Consensus 89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999988642 11223467889999999999810
Q ss_pred --------------------CCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 812 --------------------SPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 812 --------------------~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1338999999999999876666799999775
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.01 E-value=4.7e-10 Score=119.00 Aligned_cols=136 Identities=17% Similarity=0.104 Sum_probs=100.1
Q ss_pred hcccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCc--ccceEeEEEcCCccEEEEec
Q 002010 693 SLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRN--IVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 693 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~ 770 (982)
.+......+.|..+.||++...+|..+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 34443333466679999998777888999987432 2345788999998885434 55688888877788999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC--------------------------------------- 811 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 811 (982)
++|.++. .. ..+ ...++.++++.++.||+..
T Consensus 97 i~G~~l~--~~-----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 97 VPGQDLL--SS-----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CSSEETT--TS-----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cCCcccC--cC-----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 9998884 22 111 2356778888888888642
Q ss_pred ----------------CCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 812 ----------------SPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 812 ----------------~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999875
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=3.5e-10 Score=124.85 Aligned_cols=163 Identities=13% Similarity=0.155 Sum_probs=92.5
Q ss_pred hhhhcCCCccEEeccCccccCCCchhccccccccEEeecCcccccccCCCcc--ccCcceEeeccC--cccccc-hhhHH
Q 002010 138 QIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYS--EIQSLEYIGLNG--IGLNGT-VPAFL 212 (982)
Q Consensus 138 ~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--n~i~~~-~~~~l 212 (982)
.++..+++|+.|+|++|.-. .++. + .+++|++|+|..|.++......++ .+++|++|+|+. |...+. ....+
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 44556666777777665211 2232 3 266777777777766554444443 567777777642 111111 00011
Q ss_pred hhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcccCchhhc---CCCccceeecccccCCCCCC----ccc
Q 002010 213 SRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLS---RLKLLHSLFLQMNKLTGHIP----PQL 285 (982)
Q Consensus 213 ~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~---~l~~L~~L~L~~N~l~~~~~----~~l 285 (982)
. .+ + ....+++|++|+|++|.+++..+..+. .+++|++|+|+.|.+++..+ ..+
T Consensus 243 ~------~~-----------l--~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L 303 (362)
T 2ra8_A 243 R------PL-----------F--SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHV 303 (362)
T ss_dssp G------GG-----------S--CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTH
T ss_pred H------HH-----------H--hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhc
Confidence 0 00 0 013467888888888888754444443 46788888888888876432 233
Q ss_pred cCCCCCCEEEeeCCcccCcCchhhhc-ccchhhhhhccCC
Q 002010 286 SGLISLKSLDLSLNYLTGEIPESFAA-LKNLTLLQLFKNN 324 (982)
Q Consensus 286 ~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~L~~N~ 324 (982)
..+++|+.|+|++|.|+...-..+.. + ...++++.++
T Consensus 304 ~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 304 DKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred ccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 45688888888888877544333433 2 2446777666
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=1.8e-09 Score=120.36 Aligned_cols=142 Identities=13% Similarity=0.174 Sum_probs=105.4
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEec--cCCCCCchhhHHHHHHHHhcCC--CCcccceEeEEEcC---CccEEEEe
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLV--GRGTGGNDHGFLAEIQTLGRIR--HRNIVRLLGYVSNR---DTNLLLYE 769 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e 769 (982)
.+.++.|.++.||++... +..+++|+.. ..........+.+|+.+++.+. +..+.++++++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456899999999999874 4688888764 2222223456888999999986 45678888888766 34799999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC-------------------------------------- 811 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 811 (982)
|++|.++.+.. ...++..++..++.+++++++.||+..
T Consensus 122 ~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99998775421 234678888899999999999999731
Q ss_pred -----------------CCcEEecCCCCCcEEEcCCCC--EEEeccccchh
Q 002010 812 -----------------SPLIIHRDVKSNNILLDSDFE--AHVADFGLAKF 843 (982)
Q Consensus 812 -----------------~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~ 843 (982)
...++|||+++.||+++.++. +.++||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999987753 68999998864
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=3.1e-10 Score=125.30 Aligned_cols=162 Identities=17% Similarity=0.140 Sum_probs=108.4
Q ss_pred CCchhccccccccEEeecCcccccccCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCC
Q 002010 159 PLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFG 238 (982)
Q Consensus 159 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~ 238 (982)
.++..+..+++|++|+|++|.-. .++. +. +++|++|++..|.+.......+. ..
T Consensus 163 ~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~-----------------------~~ 216 (362)
T 2ra8_A 163 DLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDIL-----------------------GS 216 (362)
T ss_dssp BCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHH-----------------------HS
T ss_pred CHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHH-----------------------Hc
Confidence 45667788999999999988311 2333 43 88999999998887643333322 11
Q ss_pred CCCCCCEEeccc--CcCccc-----Cchhh--cCCCccceeecccccCCCCCCcccc---CCCCCCEEEeeCCcccCcC-
Q 002010 239 ALTQLQVLDMAS--CNISGE-----IPTSL--SRLKLLHSLFLQMNKLTGHIPPQLS---GLISLKSLDLSLNYLTGEI- 305 (982)
Q Consensus 239 ~l~~L~~L~L~~--n~l~~~-----~~~~l--~~l~~L~~L~L~~N~l~~~~~~~l~---~l~~L~~L~Ls~N~l~~~~- 305 (982)
.+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+++..
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 456777777753 221111 11122 3578999999999998854433333 4789999999999998643
Q ss_pred ---chhhhcccchhhhhhccCCCCCCCCCcCCC-CCCccEEEccCCC
Q 002010 306 ---PESFAALKNLTLLQLFKNNLRGPIPSFLGD-FPNLEVLQVWGNN 348 (982)
Q Consensus 306 ---~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 348 (982)
+..+..+++|+.|+|++|.|+...-..+.. + ...+++++++
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 344466789999999999988543333332 2 3568888887
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.91 E-value=3.8e-08 Score=110.45 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=51.8
Q ss_pred hhccCCCCcceeeeccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccc
Q 002010 474 AAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLID 553 (982)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 553 (982)
..|.++..|+.+.+..+ ++..-...+.++..|+.+.+..+ ++......|.++++|+.+.+.++.++..-..+|.++.+
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCC
Confidence 34444444554444433 32222333444445555555332 33233344555555555555555555444455555555
Q ss_pred cceEEcccccccccCccccccccccceeccc
Q 002010 554 LSILNLSRNGITGSIPNEMRNMMSLTTLDLS 584 (982)
Q Consensus 554 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 584 (982)
|+.+.|..+ ++.+-..+|.++.+|+.+.+.
T Consensus 312 L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 312 LSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred CCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 555555433 443344455556666555543
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.90 E-value=4e-11 Score=125.32 Aligned_cols=147 Identities=17% Similarity=0.170 Sum_probs=98.4
Q ss_pred CCccceeeeCCCC-CEEEEEecc---CCccccCCc-CccccccccEEEeccCCCCCCCC-hhhhhhcccce--eeccCCc
Q 002010 59 HCSFSGVTCDQDS-RVVSLNVSF---MPLFGSIPP-EIGLLTKLVNLTISNVNLTGRLP-SEMALLTSLKV--FNISGNV 130 (982)
Q Consensus 59 ~C~w~gv~C~~~~-~v~~l~l~~---~~l~g~~~~-~i~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~--L~Ls~n~ 130 (982)
-|+|.|+.|+..+ +|+.+-..+ ..+.|.+++ .+..++. .|..++|..++.+. +.+...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 3899999998654 554443333 234455553 2344443 23334444444433 23666677776 7788885
Q ss_pred cccc--cchhhhhcCCCccEEeccCccccC--CCchhccccccccEEeecCcccccccCCCccccC--cceEeeccCccc
Q 002010 131 FQGN--FAGQIVRGMTELQVLDAYNNNFTG--PLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQ--SLEYIGLNGIGL 204 (982)
Q Consensus 131 l~~~--~~~~~~~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~n~i 204 (982)
.... ....+..++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 4311 112233579999999999999997 5667888999999999999999976 3344454 999999999999
Q ss_pred ccchh
Q 002010 205 NGTVP 209 (982)
Q Consensus 205 ~~~~~ 209 (982)
.+..|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 87654
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.82 E-value=8.1e-08 Score=107.77 Aligned_cols=303 Identities=12% Similarity=0.057 Sum_probs=188.3
Q ss_pred hhcCCCccceeecccccCCCCCCccccCCCCCCEEEeeCCcccCcCchhhhcccchhhhhhccCCCCCCCCCcCCCCCCc
Q 002010 260 SLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNL 339 (982)
Q Consensus 260 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 339 (982)
++....+|+++.+.. .++.+...+|.++.+|+.++|..+ ++.....+|.+. +|+.+.+..+ +.......|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 466677899888874 466566778999999999999765 665667778776 5666666533 55344455655 478
Q ss_pred cEEEccCCCcccccCccccCCCcccEEEeccccccccCCccccCccccceeecccccccc------------cCCccccC
Q 002010 340 EVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIG------------PIPEELGQ 407 (982)
Q Consensus 340 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l~~N~~~~------------~~~~~l~~ 407 (982)
+.+.+..+- +......|.. .+|+.+.+..+ ++......|..+.+++...+..+.... .....+..
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 888887653 3233334443 35666655543 333445566666777766665433211 11223344
Q ss_pred CCCCCEEEccCCccCCCCCccccCCCccccccCCCccccccCCcccc-cCCccEEEeeccccCCCCchhccCCCCcceee
Q 002010 408 CKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMS-GASLNQLKVANNNITGKIPAAIGNLPSLNILS 486 (982)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~ 486 (982)
+..+..+.+..+.-. .....+.....|+.+.+..+ +.......+. ...|+.+.+..+ ++.....+|.++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 555555555443322 33445555666666666554 2222233333 356777777665 5556666777888888888
Q ss_pred eccccccCCCccccccccccceeeeeccccCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEcccccccc
Q 002010 487 LQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITG 566 (982)
Q Consensus 487 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 566 (982)
+..+ ++......|.++.+|+.+++.++.++.+-...|.++.+|+.++|..+ ++.+-..+|.++.+|+.+.+..+ ++.
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCE
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCE
Confidence 7654 44334455677788888888887777666677888888888888654 55455667888888888877654 554
Q ss_pred cCcccccccc
Q 002010 567 SIPNEMRNMM 576 (982)
Q Consensus 567 ~~p~~l~~l~ 576 (982)
+-..+|.++.
T Consensus 347 I~~~aF~~c~ 356 (379)
T 4h09_A 347 IESGAFEGSS 356 (379)
T ss_dssp ECTTTTTTSS
T ss_pred EchhHhhCCC
Confidence 4455666553
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.75 E-value=3.1e-09 Score=115.41 Aligned_cols=186 Identities=21% Similarity=0.213 Sum_probs=119.9
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCc--ccceEeEEEcCC---ccEEEEec
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRN--IVRLLGYVSNRD---TNLLLYEY 770 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~ 770 (982)
.+.++.|....||++. ..+++|..... .....+.+|+.+++.+. +.. +.+++....... ..|+|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3468999999999874 46889975321 23456889999998873 322 334444433332 34889999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 002010 771 MPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC--------------------------------------- 811 (982)
Q Consensus 771 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 811 (982)
++|.++.+... ..++.+++..++.++++.++.||+..
T Consensus 98 i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 98 IKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 99988865332 24677778888888888888888611
Q ss_pred ----------------CCcEEecCCCCCcEEEcC--CCCEEEeccccchhccccCCccccc-cc---cc---------cc
Q 002010 812 ----------------SPLIIHRDVKSNNILLDS--DFEAHVADFGLAKFLQDAGASECMS-SV---AG---------SY 860 (982)
Q Consensus 812 ----------------~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~-~~---~g---------t~ 860 (982)
...++|+|++|.||++++ ...+.++||+.+..-... ..-... .. .+ ..
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHc
Confidence 134899999999999998 456889999988643211 000000 00 00 00
Q ss_pred cccc-ccccccCCCCcchhhHHHHHHHHHHHhCCCCC
Q 002010 861 GYIA-PEYAYTLKVDEKSDVYSFGVVLLELIAGKKPV 896 (982)
Q Consensus 861 ~y~a-PE~~~~~~~~~~~DvwslG~il~elltg~~p~ 896 (982)
.... |+.... .....+.|+++.++|.+.+|+.+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 221111 122368999999999999998876
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.54 E-value=1.3e-08 Score=106.27 Aligned_cols=105 Identities=21% Similarity=0.300 Sum_probs=60.4
Q ss_pred ccCCCCcce--eeecccccc---CCCccccccccccceeeeeccccCC--CCCcccccccCCCeeeCCCCcccCCCCccc
Q 002010 476 IGNLPSLNI--LSLQNNRLE---GEIPVESFNLKMITSINISDNNISG--EIPYSISQCHSLTSVDLSRNSLYGKIPPGI 548 (982)
Q Consensus 476 ~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 548 (982)
+...+.|+. ++++.|+.. +.++....++++|++|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 333444444 556666432 1111122346667777777777765 3345566677777777777777654 334
Q ss_pred cccc--ccceEEcccccccccCcc-------ccccccccceec
Q 002010 549 SKLI--DLSILNLSRNGITGSIPN-------EMRNMMSLTTLD 582 (982)
Q Consensus 549 ~~l~--~L~~L~Ls~N~l~~~~p~-------~l~~l~~L~~L~ 582 (982)
..+. +|++|+|++|.+++.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 677777777777665542 355666776665
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=1.4e-08 Score=100.98 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=92.4
Q ss_pred CCcCccccccccEEEeccC-CCCCC----CChhhhhhcccceeeccCCcccccc---chhhhhcCCCccEEeccCccccC
Q 002010 87 IPPEIGLLTKLVNLTISNV-NLTGR----LPSEMALLTSLKVFNISGNVFQGNF---AGQIVRGMTELQVLDAYNNNFTG 158 (982)
Q Consensus 87 ~~~~i~~l~~L~~L~l~~n-~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~~---~~~~~~~l~~L~~L~Ls~n~l~~ 158 (982)
+...+...+.|++|+|++| +++.. +...+...++|++|+|++|.+.... ..+.+...+.|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344666788999999999 88754 3344556689999999999987532 23445567899999999999986
Q ss_pred C----CchhccccccccEEee--cCcccccccC----CCccccCcceEeeccCcccccc
Q 002010 159 P----LPVEIASLKSLRHLSF--GGNYFTGKIP----QSYSEIQSLEYIGLNGIGLNGT 207 (982)
Q Consensus 159 ~----~p~~l~~l~~L~~L~L--~~N~l~~~~p----~~~~~l~~L~~L~L~~n~i~~~ 207 (982)
. +...+...++|++|+| ++|.|+.... ..+...++|++|+|++|.++..
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~~ 166 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGPR 166 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCChH
Confidence 4 4566777889999999 8899987644 3445568999999999988743
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=4.6e-08 Score=97.30 Aligned_cols=124 Identities=13% Similarity=0.128 Sum_probs=93.7
Q ss_pred CChhhhhhcccceeeccCC-cccccc---chhhhhcCCCccEEeccCccccCC----CchhccccccccEEeecCccccc
Q 002010 111 LPSEMALLTSLKVFNISGN-VFQGNF---AGQIVRGMTELQVLDAYNNNFTGP----LPVEIASLKSLRHLSFGGNYFTG 182 (982)
Q Consensus 111 ~p~~l~~l~~L~~L~Ls~n-~l~~~~---~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 182 (982)
+...+...++|++|+|++| .+.... ....+...++|++|+|++|+|+.. +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3455677899999999999 886432 234456678999999999999854 34445566899999999999987
Q ss_pred c----cCCCccccCcceEeec--cCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEecccCcCcc
Q 002010 183 K----IPQSYSEIQSLEYIGL--NGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISG 255 (982)
Q Consensus 183 ~----~p~~~~~l~~L~~L~L--~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 255 (982)
. +...+...++|++|+| ++|.++......+... +...++|++|+|++|.+..
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~---------------------L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANM---------------------LEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHH---------------------HHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHH---------------------HHhCCCcCEEeccCCCCCh
Confidence 5 3566777889999999 8899986655544432 2234679999999998863
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=8.5e-07 Score=96.72 Aligned_cols=135 Identities=15% Similarity=0.154 Sum_probs=98.4
Q ss_pred cccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCC----CcccceEeEEEcCCccEEEEe
Q 002010 694 LKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRH----RNIVRLLGYVSNRDTNLLLYE 769 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e 769 (982)
+...+.++.|....||++ +..+++|+... ......+.+|..+++.+.+ ..+.+++++ +..++|||
T Consensus 39 i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~---~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC----NEQYVVKVPKR---DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CSCEEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred eEEEEeCCCCCCceEEEE----CCEEEEEeCCc---HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 445567899999999998 66789987622 1223457899998888865 223444444 56789999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-------------------------------------
Q 002010 770 YMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCS------------------------------------- 812 (982)
Q Consensus 770 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~------------------------------------- 812 (982)
|++|.++.+... ..++.+++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864332 235666777788888888888875321
Q ss_pred -----------------------CcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 813 -----------------------PLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 813 -----------------------~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
..++|+|++|.||+++.+..+.++||+.+..
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999876679999998864
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.30 E-value=2.7e-06 Score=90.76 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=59.6
Q ss_pred cccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCC---cccceEeEEEcCCccEEEEeccC
Q 002010 696 DENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHR---NIVRLLGYVSNRDTNLLLYEYMP 772 (982)
Q Consensus 696 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~ 772 (982)
..+.++.|.++.||++...+|+.+++|+.... .......+.+|++.++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~-~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCC-CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 34579999999999998888999999986332 233346789999999999764 577777753 4799999999
Q ss_pred CCCH
Q 002010 773 NGSL 776 (982)
Q Consensus 773 ~~sL 776 (982)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8864
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.19 E-value=4.1e-06 Score=88.89 Aligned_cols=133 Identities=18% Similarity=0.190 Sum_probs=94.7
Q ss_pred cccccce-EEEEEEeC-CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCcccceEeEEEcCCccEEEEeccCCCCH
Q 002010 700 IGKGGAG-IVYRGSMP-DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSNRDTNLLLYEYMPNGSL 776 (982)
Q Consensus 700 lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL 776 (982)
+..|..+ .||+.... ++..+++|+... .....+.+|...++.+. +--+-++++++.+++..++|||+++|.++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 4455554 69988654 467899997632 23456788999988874 32366788888888899999999999888
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------------
Q 002010 777 GEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC--------------------------------------------- 811 (982)
Q Consensus 777 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------------- 811 (982)
.+..... ......+..+++..++.||...
T Consensus 108 ~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 108 FQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred cccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 7765321 1223345566666666666421
Q ss_pred ----------CCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 812 ----------SPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 812 ----------~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
...++|+|+++.||++++++.+-|+||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237899999999999987777899999875
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.14 E-value=7.9e-06 Score=88.29 Aligned_cols=136 Identities=21% Similarity=0.171 Sum_probs=94.2
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCC---cccceEeEEE-cCCccEEEEeccC
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHR---NIVRLLGYVS-NRDTNLLLYEYMP 772 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~ 772 (982)
.+.++.|....||+. +..+++|+.. .......+.+|+.+++.+.+. .+.+++.+.. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 346788888999988 5678898742 122345688999999998642 3556666664 3455789999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 002010 773 NGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDC----------------------------------------- 811 (982)
Q Consensus 773 ~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 811 (982)
|.++.+... ..++..+...++.++++.++.||+..
T Consensus 97 G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 97 GQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp SEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred CeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 988876322 12345555556666666666655421
Q ss_pred ----------------CCcEEecCCCCCcEEEcC---CCC-EEEeccccchh
Q 002010 812 ----------------SPLIIHRDVKSNNILLDS---DFE-AHVADFGLAKF 843 (982)
Q Consensus 812 ----------------~~~ivHrDlkp~Nill~~---~~~-~kl~DfG~a~~ 843 (982)
...++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 224799999999999987 455 48999998764
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.11 E-value=6.6e-06 Score=91.20 Aligned_cols=82 Identities=7% Similarity=-0.032 Sum_probs=55.9
Q ss_pred cccc-ccccceEEEEEEeC-------CCcEEEEEEeccCC--CCCchhhHHHHHHHHhcCC-C--CcccceEeEEEcC--
Q 002010 697 ENII-GKGGAGIVYRGSMP-------DGIDVAIKRLVGRG--TGGNDHGFLAEIQTLGRIR-H--RNIVRLLGYVSNR-- 761 (982)
Q Consensus 697 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 761 (982)
.+.| +.|....+|+.... ++..+++|...... .......+.+|+.+++.+. + -.+.+++.+..+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3467 88889999998654 26788998763321 0112346778999988884 2 3466778776554
Q ss_pred -CccEEEEeccCCCCHHH
Q 002010 762 -DTNLLLYEYMPNGSLGE 778 (982)
Q Consensus 762 -~~~~lv~e~~~~~sL~~ 778 (982)
...++||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999876653
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.07 E-value=7.8e-06 Score=90.45 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=55.1
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCc--ccceEeEEEcC-CccEEEEeccCC
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRN--IVRLLGYVSNR-DTNLLLYEYMPN 773 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~~~ 773 (982)
.+.++.|....+|+.+. ++..+++|.... ...+.+|+.+++.+.... +.+++++.... ...++||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~------~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSC------ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESC------CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCc------hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 45688999999999976 688999997632 125888999988885433 45677766654 567999999988
Q ss_pred CCHH
Q 002010 774 GSLG 777 (982)
Q Consensus 774 ~sL~ 777 (982)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 6553
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88 E-value=5.5e-05 Score=85.04 Aligned_cols=76 Identities=17% Similarity=0.103 Sum_probs=49.8
Q ss_pred ccccccccceEEEEEEeC-CCcEEEEEEeccCCC------CCchhhHHHHHHHHhcCCC--Cccc-ceEeEEEcCCccEE
Q 002010 697 ENIIGKGGAGIVYRGSMP-DGIDVAIKRLVGRGT------GGNDHGFLAEIQTLGRIRH--RNIV-RLLGYVSNRDTNLL 766 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv-~~~~~~~~~~~~~l 766 (982)
.+.+|.|..+.||++... +++.|++|....... ......+..|+++++.+.. |..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 346899999999999653 468899998643221 1233456789888887732 4444 45543 3456789
Q ss_pred EEeccCCC
Q 002010 767 LYEYMPNG 774 (982)
Q Consensus 767 v~e~~~~~ 774 (982)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.84 E-value=9.1e-06 Score=78.47 Aligned_cols=84 Identities=13% Similarity=0.091 Sum_probs=45.1
Q ss_pred cccEEEeccCCCCCCCChhhhhhcccceeeccCCccccccchhhhhcCCCccEEeccCccccCCCchhcccc----cccc
Q 002010 96 KLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASL----KSLR 171 (982)
Q Consensus 96 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l----~~L~ 171 (982)
+|++||++++.++...-..+..+++|++|+|++|. ++++..-..++.+ ++|+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~------------------------~ItD~gL~~L~~~~~~~~~L~ 117 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCH------------------------YIEDGCLERLSQLENLQKSML 117 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCT------------------------TCCHHHHHHHHTCHHHHHHCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCC------------------------ccCHHHHHHHHhcccccCCCC
Confidence 57777777777765554555555566666665553 1332222333332 2455
Q ss_pred EEeecCcc-cccccCCCccccCcceEeeccCcc
Q 002010 172 HLSFGGNY-FTGKIPQSYSEIQSLEYIGLNGIG 203 (982)
Q Consensus 172 ~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~n~ 203 (982)
+|+|++|. ||+..-..+.++++|++|++++|.
T Consensus 118 ~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 118 EMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp EEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred EEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 55555552 555444455555555555555553
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=4.7e-06 Score=80.45 Aligned_cols=87 Identities=18% Similarity=0.219 Sum_probs=44.9
Q ss_pred cccEEeecCcccccccCCCccccCcceEeeccCcc-cccchhhHHhhhhhHHHHhhcccccccccCCCCCCCCCCCCEEe
Q 002010 169 SLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIG-LNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLD 247 (982)
Q Consensus 169 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~l~~L~~L~ 247 (982)
+|++|||+++.|+...-..+..+++|++|+|++|. +++..-..++.+++. .++|++|+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~---------------------~~~L~~L~ 120 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENL---------------------QKSMLEME 120 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHH---------------------HHHCCEEE
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccc---------------------cCCCCEEE
Confidence 46666666666655555555566666666666653 443333333322100 12455566
Q ss_pred cccCc-CcccCchhhcCCCccceeeccccc
Q 002010 248 MASCN-ISGEIPTSLSRLKLLHSLFLQMNK 276 (982)
Q Consensus 248 L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~ 276 (982)
|++|. |++..-..+.++++|++|+|+++.
T Consensus 121 Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 121 IISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp EESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred cCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 66553 554444445556666666666553
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.67 E-value=0.00013 Score=80.18 Aligned_cols=139 Identities=17% Similarity=0.254 Sum_probs=78.5
Q ss_pred cccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-----CCcccceE-e--EEEcCCccEEEEe
Q 002010 698 NIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-----HRNIVRLL-G--YVSNRDTNLLLYE 769 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~-~--~~~~~~~~~lv~e 769 (982)
+.++.|..+.||++...+| .+++|+... .......|+.+++.+. .|.++... | +....+..+++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR-----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS-----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC-----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3566677899999987554 589998743 1233445556555552 34443311 1 1234566789999
Q ss_pred ccCCCCHH--------------HHhhc--CC---C-------CCCCHHHH------------------------------
Q 002010 770 YMPNGSLG--------------EMLHG--AK---G-------GHLKWETR------------------------------ 793 (982)
Q Consensus 770 ~~~~~sL~--------------~~l~~--~~---~-------~~l~~~~~------------------------------ 793 (982)
|++|.++. ..+|. .. . ....|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 11121 00 0 01122211
Q ss_pred -HHHHHHHHHHHHHHhh--------c--CCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 794 -YRIALEAAKGLCYLHH--------D--CSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 794 -~~i~~~i~~~l~~LH~--------~--~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
..+..++..++++|++ . ....++|+|+++.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1112234445666653 1 13459999999999999888899999999774
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.65 E-value=0.00025 Score=76.13 Aligned_cols=137 Identities=19% Similarity=0.193 Sum_probs=91.3
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC---CCcccceEeEEEcCCccEEEEeccCC
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR---HRNIVRLLGYVSNRDTNLLLYEYMPN 773 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~ 773 (982)
.+.++.|....+|+... ++..+++|+.... ....+..|+..++.+. ...+.+++++....+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45689999999999986 5778999976432 3556888999988883 36688888888888889999999998
Q ss_pred CCHH--------H---HhhcCCC-C-------------------CCCHHHHH---HHH----------------HHHHHH
Q 002010 774 GSLG--------E---MLHGAKG-G-------------------HLKWETRY---RIA----------------LEAAKG 803 (982)
Q Consensus 774 ~sL~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~----------------~~i~~~ 803 (982)
..+. + .+|.... . .-+|.... ++. ..++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7542 1 2232211 0 12454321 111 111111
Q ss_pred -HHHHhh-cCCCcEEecCCCCCcEEEcCCCCEEEeccc
Q 002010 804 -LCYLHH-DCSPLIIHRDVKSNNILLDSDFEAHVADFG 839 (982)
Q Consensus 804 -l~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 839 (982)
...|.. ...+.++|+|+.+.|++++.++ +.++|++
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 1235599999999999999887 8899984
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00022 Score=76.06 Aligned_cols=77 Identities=21% Similarity=0.264 Sum_probs=55.1
Q ss_pred cccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCC---CcccceEeEEEcCCccEEEEec
Q 002010 694 LKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRH---RNIVRLLGYVSNRDTNLLLYEY 770 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~ 770 (982)
....+.+|.|..+.||+.+..+|+.|++|+.... .......+.+|+..|+.+.. --+.+++++ +..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCC-CcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 3445678999999999999999999999976433 33334567889999888742 224445543 245889999
Q ss_pred cCCCC
Q 002010 771 MPNGS 775 (982)
Q Consensus 771 ~~~~s 775 (982)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.49 E-value=0.00061 Score=77.04 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=47.0
Q ss_pred CcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcccccccc--cccccccccccccC---CCCcchhhHHHHHHHH
Q 002010 813 PLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVA--GSYGYIAPEYAYTL---KVDEKSDVYSFGVVLL 887 (982)
Q Consensus 813 ~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ 887 (982)
..++|+|++|.||+++.++ ++++||+.+..-... . . ..... -...|++|+..... ......++......+|
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~-D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-F-D-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-H-H-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-H-H-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 4499999999999998776 999999988643211 0 0 00001 12346666654321 1123455667788888
Q ss_pred HHHhC
Q 002010 888 ELIAG 892 (982)
Q Consensus 888 elltg 892 (982)
+.+++
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.44 E-value=7.9e-05 Score=73.33 Aligned_cols=43 Identities=12% Similarity=0.136 Sum_probs=20.9
Q ss_pred hccccccccEEeecCcccccccCCCcc----ccCcceEeeccCcccc
Q 002010 163 EIASLKSLRHLSFGGNYFTGKIPQSYS----EIQSLEYIGLNGIGLN 205 (982)
Q Consensus 163 ~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~L~~n~i~ 205 (982)
.+..-+.|++|+|++|+|+......++ .-+.|++|+|++|.|+
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 334445566666666666544433332 2344444444444444
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.07 E-value=0.00012 Score=72.10 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=74.3
Q ss_pred cccccccEEeecCc-ccccc----cCCCccccCcceEeeccCcccccchhhHHhhhhhHHHHhhcccccccccCCCCCCC
Q 002010 165 ASLKSLRHLSFGGN-YFTGK----IPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGA 239 (982)
Q Consensus 165 ~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~~n~~~~~~p~~~~~ 239 (982)
.+-+.|++|+|++| +|... +.+.+..-+.|+.|+|++|.|+...-.++... +..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~a---------------------L~~ 96 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIEL---------------------IET 96 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHH---------------------HHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHH---------------------Hhc
Confidence 34455666666664 55533 23345556788999999998886655555442 222
Q ss_pred CCCCCEEecccCcCcccCc----hhhcCCCccceeeccccc---CCCC----CCccccCCCCCCEEEeeCCccc
Q 002010 240 LTQLQVLDMASCNISGEIP----TSLSRLKLLHSLFLQMNK---LTGH----IPPQLSGLISLKSLDLSLNYLT 302 (982)
Q Consensus 240 l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~L~~N~---l~~~----~~~~l~~l~~L~~L~Ls~N~l~ 302 (982)
-+.|+.|+|++|.|+.... ..+..-+.|++|+|++|. +... +...+..-++|+.|+++.|.+.
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 3678899999999885433 345566778888887653 3321 2334445577888888877654
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.06 E-value=0.0017 Score=70.82 Aligned_cols=140 Identities=16% Similarity=0.159 Sum_probs=72.1
Q ss_pred cccccccceE-EEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCC--CcccceEeEEEcCCccEEEEeccCCC
Q 002010 698 NIIGKGGAGI-VYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRH--RNIVRLLGYVSNRDTNLLLYEYMPNG 774 (982)
Q Consensus 698 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~ 774 (982)
+.++.|+... +|+....++..+++|...... ...+..|+.+++.+.. -.+.+++.+. .+..+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEE--HARGLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEE--TTTTEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeec--CCCCEEEEeeCCCc
Confidence 3566665554 678766447778887653221 1234466777666632 2345566543 23347899999776
Q ss_pred CHHHHhhcC---------------------CC---CCCCHHHHH-------HH-------------HHHHHHHHHHHh--
Q 002010 775 SLGEMLHGA---------------------KG---GHLKWETRY-------RI-------------ALEAAKGLCYLH-- 808 (982)
Q Consensus 775 sL~~~l~~~---------------------~~---~~l~~~~~~-------~i-------------~~~i~~~l~~LH-- 808 (982)
++.+++... .. ..++..... .+ ...+...++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 665443211 00 112221110 00 001111222221
Q ss_pred -hcCCCcEEecCCCCCcEEEcCC----CCEEEeccccchh
Q 002010 809 -HDCSPLIIHRDVKSNNILLDSD----FEAHVADFGLAKF 843 (982)
Q Consensus 809 -~~~~~~ivHrDlkp~Nill~~~----~~~kl~DfG~a~~ 843 (982)
......++|||+++.||+++.+ +.+.++||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1113449999999999999875 6899999998864
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.04 E-value=0.0023 Score=68.63 Aligned_cols=71 Identities=13% Similarity=0.103 Sum_probs=45.3
Q ss_pred ccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcc-cceEeEEEcCCccEEEEecc-CCC
Q 002010 697 ENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNI-VRLLGYVSNRDTNLLLYEYM-PNG 774 (982)
Q Consensus 697 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~~ 774 (982)
.+.++.|....+|++ ..+++|+.... . .......+|+.+++.+....+ .+++++ +.+..++++||+ +|.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~-~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKG-T-EEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCC-c-cceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 567889999999998 56888876432 1 112234578888877743333 345543 444568899999 665
Q ss_pred CH
Q 002010 775 SL 776 (982)
Q Consensus 775 sL 776 (982)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.91 E-value=0.0011 Score=60.97 Aligned_cols=55 Identities=27% Similarity=0.372 Sum_probs=30.2
Q ss_pred eeeCCCCccc-CCCCcccccccccceEEcccccccccCccccccccccceecccCCcc
Q 002010 532 SVDLSRNSLY-GKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNL 588 (982)
Q Consensus 532 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 588 (982)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|++
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 23443322 2466666666666655555566666666666665544
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.61 E-value=0.011 Score=64.05 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=47.9
Q ss_pred ccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCC--cccceEeE-----EEcCCccEEEEecc
Q 002010 699 IIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHR--NIVRLLGY-----VSNRDTNLLLYEYM 771 (982)
Q Consensus 699 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~-----~~~~~~~~lv~e~~ 771 (982)
.++ |....||++...+|+.+++|...... .....+..|..+++.+... .+.+++.. ....+..+++|||+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 466 78889999987778789999874321 2345667788887776321 13344432 12244557899999
Q ss_pred CCCC
Q 002010 772 PNGS 775 (982)
Q Consensus 772 ~~~s 775 (982)
+|.+
T Consensus 110 ~G~~ 113 (328)
T 1zyl_A 110 GGRQ 113 (328)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 8754
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.61 E-value=0.0044 Score=69.91 Aligned_cols=72 Identities=19% Similarity=0.318 Sum_probs=48.7
Q ss_pred cccccccceEEEEEEeCC--------CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcc-cceEeEEEcCCccEEEE
Q 002010 698 NIIGKGGAGIVYRGSMPD--------GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNI-VRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 768 (982)
+.|+.|....||++..++ +..|++|+.... .....+.+|..+++.+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 467888899999998653 578999876221 122456689999888853333 566665432 4899
Q ss_pred eccCCCCH
Q 002010 769 EYMPNGSL 776 (982)
Q Consensus 769 e~~~~~sL 776 (982)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 438
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.58 E-value=0.012 Score=63.67 Aligned_cols=141 Identities=15% Similarity=0.134 Sum_probs=76.9
Q ss_pred cccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-----CCcccceE-e--EEEcCCccEEEEe
Q 002010 698 NIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-----HRNIVRLL-G--YVSNRDTNLLLYE 769 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~-~--~~~~~~~~~lv~e 769 (982)
+.|+.|....+|+....+| .+++|..... .....+..|+.+++.+. .|.++... | +....+..+++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~---~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR---VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC---CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 4577888899999987555 6889987442 12334556777776663 23333211 1 1122355689999
Q ss_pred ccCCCCHHH--------------HhhcC----CCCC---C---CHHHHHH------------HHHHHHHHHHHHhhc---
Q 002010 770 YMPNGSLGE--------------MLHGA----KGGH---L---KWETRYR------------IALEAAKGLCYLHHD--- 810 (982)
Q Consensus 770 ~~~~~sL~~--------------~l~~~----~~~~---l---~~~~~~~------------i~~~i~~~l~~LH~~--- 810 (982)
|++|..+.. .+|.. .... . .|..... +...+...++++++.
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 998865321 11210 0000 1 1221100 001133444455421
Q ss_pred -CCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 811 -CSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 811 -~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
....++|+|+++.||+++++..+.++||+.+.
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12348999999999999887666899998775
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.55 E-value=0.0065 Score=66.89 Aligned_cols=140 Identities=19% Similarity=0.270 Sum_probs=83.1
Q ss_pred cccccccceEEEEEEeC--------CCcEEEEEEeccCCCCCchhhHHHHHHHHhcCC-CCcccceEeEEEcCCccEEEE
Q 002010 698 NIIGKGGAGIVYRGSMP--------DGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIR-HRNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 768 (982)
+.+..|-...+|++..+ +++.|++|+. .. .......+.+|..+++.+. +.-..++++.+.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 35777888899999764 2478999875 22 1234556678999998884 3223556665543 3899
Q ss_pred eccCCCCHHH-----------------HhhcCC---CCCCC--HHHHHHHHHHHHHH-------------------HHHH
Q 002010 769 EYMPNGSLGE-----------------MLHGAK---GGHLK--WETRYRIALEAAKG-------------------LCYL 807 (982)
Q Consensus 769 e~~~~~sL~~-----------------~l~~~~---~~~l~--~~~~~~i~~~i~~~-------------------l~~L 807 (982)
||++|.++.. .+|... ..... +.++.++..++... +..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9998865431 112111 11222 45566666554321 2222
Q ss_pred ----hhcC-CCcEEecCCCCCcEEEcCC----CCEEEeccccchh
Q 002010 808 ----HHDC-SPLIIHRDVKSNNILLDSD----FEAHVADFGLAKF 843 (982)
Q Consensus 808 ----H~~~-~~~ivHrDlkp~Nill~~~----~~~kl~DfG~a~~ 843 (982)
.... ...++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2211 2348899999999999876 7899999998863
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0035 Score=57.49 Aligned_cols=56 Identities=18% Similarity=0.226 Sum_probs=37.6
Q ss_pred eeeeeccccC-CCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccccccc
Q 002010 508 SINISDNNIS-GEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGIT 565 (982)
Q Consensus 508 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 565 (982)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 23444332 35778888888887655666777888888888888764
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.49 E-value=0.011 Score=64.27 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=27.2
Q ss_pred CcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 813 PLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 813 ~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
..++|+|+.+.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3489999999999999888899999987754
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.34 E-value=0.018 Score=65.26 Aligned_cols=73 Identities=18% Similarity=0.129 Sum_probs=46.8
Q ss_pred cccccccceEEEEEEeCC-CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcc-cceEeEEEcCCccEEEEeccCCCC
Q 002010 698 NIIGKGGAGIVYRGSMPD-GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNI-VRLLGYVSNRDTNLLLYEYMPNGS 775 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~~s 775 (982)
+.|+.|-...+|++...+ +..+++|+.... .. ......+|..+++.+...++ .++++.+. ...||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~-~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~----~G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPK-TD-EIINREREKKISCILYNKNIAKKIYVFFT----NGRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC--CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET----TEEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCC-hh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC----CeEEEEeeCCcc
Confidence 468889899999998755 478888876322 21 12223588888888864444 46666652 246999998754
Q ss_pred H
Q 002010 776 L 776 (982)
Q Consensus 776 L 776 (982)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.33 E-value=0.0078 Score=66.52 Aligned_cols=73 Identities=11% Similarity=0.107 Sum_probs=43.5
Q ss_pred cccccccceEEEEEEeCC---------CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCc-ccceEeEEEcCCccEEE
Q 002010 698 NIIGKGGAGIVYRGSMPD---------GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRN-IVRLLGYVSNRDTNLLL 767 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv 767 (982)
+.++.|....+|++...+ +..+++|+.... . ........|..+++.+.... +.++++.. ..++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~-~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKH-V-DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTT-G-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCC-c-cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 357888889999997644 268888875322 1 11123467888888774333 34666543 24789
Q ss_pred EeccCCCCH
Q 002010 768 YEYMPNGSL 776 (982)
Q Consensus 768 ~e~~~~~sL 776 (982)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.05 E-value=0.044 Score=54.02 Aligned_cols=103 Identities=18% Similarity=0.167 Sum_probs=67.8
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccchhccccCCcccc
Q 002010 774 GSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECM 853 (982)
Q Consensus 774 ~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 853 (982)
.+|.+++.. .+.+++++++|.++.|.+.++...-....+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 388998874 468999999999999999998776221111 1333457889999999988764 1111
Q ss_pred cccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 002010 854 SSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKP 895 (982)
Q Consensus 854 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 895 (982)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888753 3456888999999999999974444
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.23 E-value=0.051 Score=60.01 Aligned_cols=141 Identities=20% Similarity=0.285 Sum_probs=81.5
Q ss_pred cccccccceEEEEEEeCC--------CcEEEEEEeccCCCCC-----------c-------hhhHHHHHHHHhcCC-CCc
Q 002010 698 NIIGKGGAGIVYRGSMPD--------GIDVAIKRLVGRGTGG-----------N-------DHGFLAEIQTLGRIR-HRN 750 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~n 750 (982)
+.+..|-...+|++..++ ...|++++.-. ..+. . ......|..+++.+. +.-
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~-~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGA-ILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC------------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCC-CcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 356668888999997754 36788887522 2211 0 112235888888874 333
Q ss_pred ccceEeEEEcCCccEEEEeccCCCCHHH--H---------------hhcCC---CCCCC--HHHHHHHHHHHHH------
Q 002010 751 IVRLLGYVSNRDTNLLLYEYMPNGSLGE--M---------------LHGAK---GGHLK--WETRYRIALEAAK------ 802 (982)
Q Consensus 751 iv~~~~~~~~~~~~~lv~e~~~~~sL~~--~---------------l~~~~---~~~l~--~~~~~~i~~~i~~------ 802 (982)
..++++++.. .+|+||++|.+|.. + +|... ..... +..+.++..++..
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 4566766532 38999998754421 1 11111 11222 3344444443321
Q ss_pred ----------------HH----HHHhhcC-CCcEEecCCCCCcEEEcCC------CCEEEeccccchh
Q 002010 803 ----------------GL----CYLHHDC-SPLIIHRDVKSNNILLDSD------FEAHVADFGLAKF 843 (982)
Q Consensus 803 ----------------~l----~~LH~~~-~~~ivHrDlkp~Nill~~~------~~~kl~DfG~a~~ 843 (982)
.+ +++...+ ...++|+|+.+.||+++++ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 11 2232222 2347899999999999887 7899999988753
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.75 E-value=0.099 Score=58.28 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=82.8
Q ss_pred cccccccceEEEEEEeCC--------CcEEEEEEeccCCCCCchhhHHHHHHHHhcCCC-CcccceEeEEEcCCccEEEE
Q 002010 698 NIIGKGGAGIVYRGSMPD--------GIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRH-RNIVRLLGYVSNRDTNLLLY 768 (982)
Q Consensus 698 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 768 (982)
+.+..|-...+|+....+ +..|++|+.. ... .......+|..+++.+.. .-..++++.+ ..+.||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g-~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYG-KHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECC-CCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECC-CCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEE
Confidence 357778889999997753 5789998753 222 222345688888888743 2234555533 247899
Q ss_pred eccCCCCHHH--------------H---hhc--C---------CCCCCCHHHHHHHHHHHH-------------------
Q 002010 769 EYMPNGSLGE--------------M---LHG--A---------KGGHLKWETRYRIALEAA------------------- 801 (982)
Q Consensus 769 e~~~~~sL~~--------------~---l~~--~---------~~~~l~~~~~~~i~~~i~------------------- 801 (982)
||++|.++.. . +|. . ...+..+.++.++..++-
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865321 0 110 0 111112444444443321
Q ss_pred HHHHHHh--------------------h-cCCCcEEecCCCCCcEEEcCCCCEEEeccccchh
Q 002010 802 KGLCYLH--------------------H-DCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKF 843 (982)
Q Consensus 802 ~~l~~LH--------------------~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 843 (982)
..+.+|. . .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 1222222 1 11234889999999999 7888999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.75 E-value=0.67 Score=51.38 Aligned_cols=29 Identities=28% Similarity=0.510 Sum_probs=24.8
Q ss_pred EEecCCCCCcEEE------cCCCCEEEeccccchh
Q 002010 815 IIHRDVKSNNILL------DSDFEAHVADFGLAKF 843 (982)
Q Consensus 815 ivHrDlkp~Nill------~~~~~~kl~DfG~a~~ 843 (982)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567899999998864
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.88 E-value=0.63 Score=32.53 Aligned_cols=29 Identities=17% Similarity=0.379 Sum_probs=12.2
Q ss_pred eeehhhHHHHHHHHHHHHHhhhhhhhhhc
Q 002010 642 KIVITVIALLTFMLLVILTIYQLRKRRLQ 670 (982)
Q Consensus 642 ~ii~~~~~~~~~~~l~~l~~~~~r~~~~~ 670 (982)
.++.++++++.++++.+..+++.|+|+++
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 34444444433333333334444444433
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.84 E-value=2.1 Score=30.03 Aligned_cols=28 Identities=18% Similarity=0.381 Sum_probs=11.9
Q ss_pred eeehhhHH-HHHHHHHHHHHhhhhhhhhh
Q 002010 642 KIVITVIA-LLTFMLLVILTIYQLRKRRL 669 (982)
Q Consensus 642 ~ii~~~~~-~~~~~~l~~l~~~~~r~~~~ 669 (982)
.|..++++ ++++++++...+++.|+|++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34444444 33333333334444444443
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.97 E-value=8.6 Score=37.76 Aligned_cols=116 Identities=11% Similarity=0.118 Sum_probs=79.0
Q ss_pred CCCcccceEeEEEcCCccEEEEeccCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCcE
Q 002010 747 RHRNIVRLLGYVSNRDTNLLLYEYMPNG-SLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNI 825 (982)
Q Consensus 747 ~h~niv~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~Ni 825 (982)
.||+.+.. .+..+++.+.+.++.-+.+ +... + ...+...+++++.+|+....+++.. +|=-++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 68888876 4556666666666654422 3333 3 2578899999999999998766643 5778999999
Q ss_pred EEcCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 002010 826 LLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGE 898 (982)
Q Consensus 826 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 898 (982)
+++.++.+++.=.|+-..+ +|. ..+...=.-.+=+++..+++++..|..
T Consensus 111 ~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999866653322 221 112223344567888899999888754
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=76.29 E-value=2.5 Score=29.64 Aligned_cols=30 Identities=17% Similarity=0.339 Sum_probs=12.7
Q ss_pred ceeehhhHH-HHHHHHHHHHHhhhhhhhhhc
Q 002010 641 SKIVITVIA-LLTFMLLVILTIYQLRKRRLQ 670 (982)
Q Consensus 641 ~~ii~~~~~-~~~~~~l~~l~~~~~r~~~~~ 670 (982)
..|...+++ ++++++++...+++.|+|+++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 334444444 333333333444444544443
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.44 E-value=0.63 Score=52.58 Aligned_cols=61 Identities=7% Similarity=-0.019 Sum_probs=17.6
Q ss_pred cccccccccceEEEEEEeCC-CcEEEE------EEeccCC-CCCchhhHHHHHHHHhcCCCCcccceEeEEE
Q 002010 696 DENIIGKGGAGIVYRGSMPD-GIDVAI------KRLVGRG-TGGNDHGFLAEIQTLGRIRHRNIVRLLGYVS 759 (982)
Q Consensus 696 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 759 (982)
..+.+| ||.||+|.+.. ..+||+ |..+... +.+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999997743 367888 6654322 2233456888999999999999999998754
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=67.68 E-value=15 Score=36.14 Aligned_cols=115 Identities=12% Similarity=0.096 Sum_probs=76.9
Q ss_pred CCCcccceEeEEEcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCcEEecCCCCCcE
Q 002010 747 RHRNIVRLLGYVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLC-YLHHDCSPLIIHRDVKSNNI 825 (982)
Q Consensus 747 ~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivHrDlkp~Ni 825 (982)
.||++ -...-.+++...+.++.-+++.=...++ ..+..++++++.+|+.... ++++ -+|=-++|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57887 3444566677777777664443233343 5788999999999999888 6654 35777999999
Q ss_pred EEcCCCCEEEeccccchhccccCCcccccccccccccccccccccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 002010 826 LLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVG 897 (982)
Q Consensus 826 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~ 897 (982)
+++.++.+++.=.|+-.. ++|.- .++.-=.-.+=+++..++.++..|.
T Consensus 116 ~f~~~~~p~i~hRGi~~~-------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKES-------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTT-------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCccc-------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999986665332 23321 1112223356677888888877764
No 454
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=39.10 E-value=1.5e+02 Score=34.72 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=52.3
Q ss_pred cceEeEEEcCCccEEEEeccCCCCHHHHhhcCC-----------C--CCC--CHHHHHHHHHHHHH--HHHHHhhcCCCc
Q 002010 752 VRLLGYVSNRDTNLLLYEYMPNGSLGEMLHGAK-----------G--GHL--KWETRYRIALEAAK--GLCYLHHDCSPL 814 (982)
Q Consensus 752 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----------~--~~l--~~~~~~~i~~~i~~--~l~~LH~~~~~~ 814 (982)
++.|.+........+| |+++..++.+++.... . ..+ ....+..++.++|- .+.|+=.
T Consensus 476 i~~Y~Vipls~~~GLI-E~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG----- 549 (696)
T 2x6h_A 476 LTPYKVLATSSKHGFL-QYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG----- 549 (696)
T ss_dssp CCCCCEEESSTTCEEE-ECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred EeccEEEeccCCCCee-eeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 4455666655555554 8877767776664321 0 111 12345556555542 3555543
Q ss_pred EEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 815 IIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 815 ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
-+|=+++||+++.+|++.=+|||.+.
T Consensus 550 --lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 --VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp --CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred --CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 46889999999999999999999874
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=33.82 E-value=1.6e+02 Score=33.78 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=53.3
Q ss_pred cceEeEEEcCCccEEEEeccCCCCHHHHhhcC----------CCC-----CCCHHHHHHHHHHHHH--HHHHHhhcCCCc
Q 002010 752 VRLLGYVSNRDTNLLLYEYMPNGSLGEMLHGA----------KGG-----HLKWETRYRIALEAAK--GLCYLHHDCSPL 814 (982)
Q Consensus 752 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----------~~~-----~l~~~~~~~i~~~i~~--~l~~LH~~~~~~ 814 (982)
++.|.+........+ .|++++.++.+.+... ... ...++.+..++.++|- .+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 455666666555554 5888776666555321 101 1224555666666543 4556543
Q ss_pred EEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 815 IIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 815 ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
-+|=+++||+++.+|++.=+|||.+.
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 35888999999999999999999874
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=33.75 E-value=45 Score=34.99 Aligned_cols=140 Identities=14% Similarity=0.068 Sum_probs=70.0
Q ss_pred cccccccccccceEEEEEEeCCCcEEEEEEeccCCCCCchhhHHHHHHHHhcCCCCcccceEeE----------------
Q 002010 694 LKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGY---------------- 757 (982)
Q Consensus 694 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~---------------- 757 (982)
++..+....|. +.||.+.. ++..|+||.. +....+.+..++...-.+..|+..-+.-.
T Consensus 71 v~~I~~s~~Gs-tgvff~~t-d~~~~VVK~s----~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~ 144 (342)
T 1cja_A 71 FKGIERSEKGT-EGLFFVET-ESGVFIVKRS----TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDK 144 (342)
T ss_dssp EEEEEECCSTT-SCEEEEEE-SSCEEEEECC----TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCS
T ss_pred eeEEEeccCCC-CCeEEEEe-CCCEEEEeCc----HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhh
Confidence 33444445555 45555544 6778999943 12223333444444444555542211100
Q ss_pred ------EEcCCccEEEEeccCCCCHHHHhhcCCCCCCCHHHHHHHHHHH--HHHHHHHhhcCC-CcEE-ecCCCCCcEEE
Q 002010 758 ------VSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEA--AKGLCYLHHDCS-PLII-HRDVKSNNILL 827 (982)
Q Consensus 758 ------~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~~-~~iv-HrDlkp~Nill 827 (982)
.......+++|||++|..|.+.-+..-...+.. +...++ +-++..+..+.. .+.+ +.--.+.||++
T Consensus 145 ~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 145 SFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp SSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred hhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 001224569999998876655322100011222 223333 234455554432 1211 12257889999
Q ss_pred cCCCC-EEEeccccchh
Q 002010 828 DSDFE-AHVADFGLAKF 843 (982)
Q Consensus 828 ~~~~~-~kl~DfG~a~~ 843 (982)
++++. +.++|-+.+..
T Consensus 221 ~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 221 SERGATVVPIDSKIIPL 237 (342)
T ss_dssp ESBTTCEEECSCCCCCC
T ss_pred eCCCCeEEEEcCCcccc
Confidence 87654 88999998854
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=30.73 E-value=34 Score=23.12 Aligned_cols=10 Identities=20% Similarity=0.504 Sum_probs=4.1
Q ss_pred HHHHHhhhhh
Q 002010 656 LVILTIYQLR 665 (982)
Q Consensus 656 l~~l~~~~~r 665 (982)
++.+.+|.+|
T Consensus 27 i~~l~~~~~r 36 (38)
T 2k1k_A 27 LLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHee
Confidence 3344444443
No 458
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=25.30 E-value=2.5e+02 Score=34.65 Aligned_cols=59 Identities=17% Similarity=0.151 Sum_probs=37.9
Q ss_pred HHHHhhcCCCCCCCHHH-HHHHHHHHHH--HHHHHhhcCCCcEEecCCCCCcEEEcCCCCEEEeccccch
Q 002010 776 LGEMLHGAKGGHLKWET-RYRIALEAAK--GLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAK 842 (982)
Q Consensus 776 L~~~l~~~~~~~l~~~~-~~~i~~~i~~--~l~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 842 (982)
|.+|+.... ....+.. +..+++++|- .+.|+=. -+|=+++||+++.+|++.=+|||.+.
T Consensus 900 L~~~f~~~~-~~~~~~~ar~nF~~S~A~ysvv~YiLg-------igDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 900 LHQWLKDKN-KGEIYDAAIDLFTRSCAGYCVATFILG-------IGDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHTTS-CTTSHHHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHhcC-ChHHHHHHHHHHHHHhhhhhheEEEEe-------ecCCCCcceEEeCCCCEEEEeehhhh
Confidence 444444322 2334444 3455555543 4555543 35888999999999999999999874
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.78 E-value=1.3e+02 Score=25.31 Aligned_cols=45 Identities=13% Similarity=0.005 Sum_probs=23.3
Q ss_pred cCCCCCcccccccCCCeeeCCCCcccCCCCcccccccccceEEccc
Q 002010 516 ISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSR 561 (982)
Q Consensus 516 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 561 (982)
++.+-...|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33334455666666666666544 2323444555555555555543
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=23.98 E-value=80 Score=26.54 Aligned_cols=36 Identities=19% Similarity=0.184 Sum_probs=13.7
Q ss_pred hhcCCCccceeecccccCCCCCCccccCCCCCCEEEe
Q 002010 260 SLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDL 296 (982)
Q Consensus 260 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 296 (982)
.|.++++|+++.+-.+ ++.+...+|.++.+|+.+.+
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 3444444444444332 22233333444444444433
Done!