Citrus Sinensis ID: 002010

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980--
MRATASFNPHLYISLFLLLFSLSCAYSDMDVLLKLKSSMIGPKGSGLKNWEPSSSPSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLRNGTCQSLINSAKHSGDGYGSSFGASKIVITVIALLTFMLLVILTIYQLRKRRLQKSKAWKLTAFQRLDFKAEDVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLITL
ccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccccEEEEEEcccccCECccccccccccccEEEcccccccccccHHHcccccccEEEcccccccccccHHHHHccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccHHHHccccccccccccccccccccccccccccccccccccccccEEcccccccccccccEEEccccccECcccHHHcccccccEEcccccCEEEcccHHHHccccccEEEcccccccccccHHccccccccEEEcccccccccccHHHcccccccEEEECcccccccccHHHHccccccEEEccccEEEEcccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEcccccccccccccccccccccEEEcccccccccccHHHHcccccccEEcccccccccccHHHHccccccEEEcccccccccccHHHHccccccccccccccccccccHHHHccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHccccccEEEcccccEEEEEEcccccEEEEEEEccccccccccHHHHHHHHHccccccccccEEEEEEcccccEEEEcccccccHHccccccccccccHHHHHHHHHHHHHHHcccccccccccEEcccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccHHHHcccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccc
****ASFNPHLYISLFLLLFSLSCAYSDMDVLLKLKSSMIG*KGSGLKNWEPSSSPSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLRNGTCQ************YGSSFGASKIVITVIALLTFMLLVILTIYQLRKRRLQKSKAWKLTAFQRLDFKAEDVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTS*****SDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLI*L
xxxxxxHHHHHHxxxHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MRATASFNPHLYISLFLLLFSLSCAYSDMDVLLKLKSSMIGPKGSGLKNWEPSSSPSAHCSFSGVTCDQDSRVVSLNVSFMPLFGSIPPEIGLLTKLVNLTISNVNLTGRLPSEMALLTSLKVFNISGNVFQGNFAGQIVRGMTELQVLDAYNNNFTGPLPVEIASLKSLRHLSFGGNYFTGKIPQSYSEIQSLEYIGLNGIGLNGTVPAFLSRLKNLREMYIGYFNTYTGGIPPGFGALTQLQVLDMASCNISGEIPTSLSRLKLLHSLFLQMNKLTGHIPPQLSGLISLKSLDLSLNYLTGEIPESFAALKNLTLLQLFKNNLRGPIPSFLGDFPNLEVLQVWGNNFTFELPENLGRNGKLLILDVTSNHLTGTIPRDLCKGGKLKSLILMQNFFIGPIPEELGQCKSLTKIRFSKNYLNGTIPAGLFNLPLLNMMELDDNLLSGELPEKMSGASLNQLKVANNNITGKIPAAIGNLPSLNILSLQNNRLEGEIPVESFNLKMITSINISDNNISGEIPYSISQCHSLTSVDLSRNSLYGKIPPGISKLIDLSILNLSRNGITGSIPNEMRNMMSLTTLDLSYNNLIGNIPSGGQFLAFNETSFIGNPNLCLLRNGTCQSLINSAKHSGDGYGSSFGASKIVITVIALLTFMLLVILTIYQLRKRRLQKSKAWKLTAFQRLDFKAEDVLESLKDENIIGKGGAGIVYRGSMPDGIDVAIKRLVGRGTGGNDHGFLAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPNGSLGEMLHGAKGGHLKWETRYRIALEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRKTTSEVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLITL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Receptor protein kinase CLAVATA1 Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation.probableQ9SYQ8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable
2.7.11.1Transferred entry: 2.7.11.19.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4EZG, chain A
Confidence level:very confident
Coverage over the Query: 405-433,457-586
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Template: 3G06, chain A
Confidence level:very confident
Coverage over the Query: 216-426,451-552
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Template: 3G06, chain A
Confidence level:very confident
Coverage over the Query: 242-379,407-576
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Template: 4FMZ, chain A
Confidence level:very confident
Coverage over the Query: 236-422,447-586
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Template: 4FCG, chain A
Confidence level:very confident
Coverage over the Query: 23-187,237-349
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Template: 1H6T, chain A
Confidence level:very confident
Coverage over the Query: 119-207,235-350
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Template: 2V9T, chain B
Confidence level:very confident
Coverage over the Query: 459-616
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Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 689-974
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Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 23-623
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Template: 3VN9, chain A
Confidence level:probable
Coverage over the Query: 681-920,931-967
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Template: 3FXI, chain A
Confidence level:probable
Coverage over the Query: 71-594
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