Query         002011
Match_columns 982
No_of_seqs    395 out of 2176
Neff          6.7 
Searched_HMMs 29240
Date          Mon Mar 25 08:35:51 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002011.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002011hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2gso_A Phosphodiesterase-nucle 100.0 6.4E-31 2.2E-35  301.4  13.4  268   67-387     5-388 (393)
  2 4gtw_A Ectonucleotide pyrophos 100.0 1.6E-28 5.6E-33  305.9  15.0  203   69-287   110-327 (823)
  3 3ed4_A Arylsulfatase; structur  99.9 5.5E-27 1.9E-31  277.1  22.9  277   67-386    26-396 (502)
  4 4fdi_A N-acetylgalactosamine-6  99.9 1.6E-26 5.6E-31  273.5  25.3  356   66-463     2-454 (502)
  5 1auk_A Arylsulfatase A; cerebr  99.9 4.1E-26 1.4E-30  269.3  26.2  276   69-386     3-347 (489)
  6 3b5q_A Putative sulfatase YIDJ  99.9 1.4E-26 4.7E-31  272.9  19.7  344   68-462    16-445 (482)
  7 1p49_A Steryl-sulfatase; stero  99.9 1.1E-25 3.7E-30  270.1  24.4  351   68-464     5-522 (562)
  8 2qzu_A Putative sulfatase YIDJ  99.9   9E-26 3.1E-30  266.3  23.1  276   67-385    26-390 (491)
  9 1hdh_A Arylsulfatase; hydrolas  99.9 1.2E-25 4.3E-30  267.9  22.0  275   68-386     4-447 (536)
 10 1fsu_A N-acetylgalactosamine-4  99.9 4.8E-25 1.7E-29  260.2  24.7  270   68-385     3-341 (492)
 11 2vqr_A Putative sulfatase; pho  99.9 1.2E-25 4.3E-30  268.3  19.8  349   68-460    32-521 (543)
 12 3lxq_A Uncharacterized protein  99.9 2.9E-25 9.8E-30  259.1  21.6  272   66-385    83-373 (450)
 13 3q3q_A Alkaline phosphatase; h  99.9 8.3E-26 2.8E-30  268.0   8.9  212   67-289    38-351 (565)
 14 3nkq_A Ectonucleotide pyrophos  99.9   9E-25 3.1E-29  271.0  13.2  199   67-289   126-329 (831)
 15 2w8d_A Processed glycerol phos  99.9 2.7E-22 9.1E-27  233.4  23.0  269   66-383    29-339 (436)
 16 2w5q_A Processed glycerol phos  99.9 2.6E-22 8.8E-27  232.7  18.0  268   66-382    27-337 (424)
 17 2w5v_A Alkaline phosphatase; p  99.8 1.5E-21 5.1E-26  222.7   9.9  251   66-369    32-374 (375)
 18 1ei6_A Phosphonoacetate hydrol  99.8 1.3E-20 4.3E-25  217.1   4.5  203   65-293    12-250 (406)
 19 3szy_A Phosphonoacetate hydrol  99.8 1.1E-19 3.7E-24  210.3   3.1  201   65-290    20-260 (427)
 20 3m7v_A Phosphopentomutase; str  99.8 2.4E-19 8.1E-24  203.7   5.2  117  224-384   288-405 (413)
 21 3ot9_A Phosphopentomutase; alk  99.5 1.9E-14 6.3E-19  162.7  12.0  120  222-384   277-398 (399)
 22 2i09_A Phosphopentomutase; str  99.5 5.1E-14 1.8E-18  158.9  11.8  117  223-383   284-402 (403)
 23 3igz_B Cofactor-independent ph  99.5 4.9E-14 1.7E-18  164.0  11.8  123  222-379   411-549 (561)
 24 1o98_A 2,3-bisphosphoglycerate  99.4 4.7E-13 1.6E-17  156.2  11.5  116  223-380   390-509 (511)
 25 2zkt_A 2,3-bisphosphoglycerate  98.9   1E-09 3.4E-14  126.2   7.8  113  224-369   293-407 (412)
 26 3a52_A Cold-active alkaline ph  98.7 7.6E-08 2.6E-12  109.9  13.5   60  222-286   213-272 (400)
 27 3kd8_A 2,3-bisphosphoglycerate  98.2 1.6E-06 5.6E-11   98.6   8.7   78  224-314   290-368 (399)
 28 1k7h_A Alkaline phosphatase; h  98.0 5.8E-06   2E-10   95.9   7.1   58  223-286   302-359 (476)
 29 1zed_A Alkaline phosphatase; p  97.9 1.3E-05 4.5E-10   93.1   8.0   56  225-286   305-360 (484)
 30 3tg0_A Apase, alkaline phospha  97.8 3.3E-05 1.1E-09   88.6   9.5   59  224-287   315-373 (449)
 31 2x98_A Alkaline phosphatase; h  96.3  0.0077 2.6E-07   69.3   8.8   56  225-285   250-305 (431)
 32 2w0y_A APH, alkaline phosphata  96.0  0.0038 1.3E-07   72.1   4.3   58  224-286   292-349 (473)
 33 3e2d_A Alkaline phosphatase; c  93.8   0.039 1.3E-06   64.2   4.6   58  223-285   260-317 (502)
 34 2d1g_A Acid phosphatase; ACPA,  92.1     3.8 0.00013   47.8  18.1  104  225-369   336-450 (498)
 35 1ei6_A Phosphonoacetate hydrol  86.5    0.23   8E-06   56.3   2.1   21  289-312   364-384 (406)
 36 3szy_A Phosphonoacetate hydrol  77.4    0.83 2.8E-05   52.4   2.1   43  290-367   378-422 (427)
 37 2zkt_A 2,3-bisphosphoglycerate  52.6      14 0.00046   42.1   5.5   58   69-127     5-68  (412)
 38 3kd8_A 2,3-bisphosphoglycerate  46.7      14 0.00047   41.9   4.3   58   69-127     5-68  (399)

No 1  
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=99.97  E-value=6.4e-31  Score=301.38  Aligned_cols=268  Identities=24%  Similarity=0.321  Sum_probs=192.4

Q ss_pred             CCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCCCCCC
Q 002011           67 PAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWKANPV  146 (982)
Q Consensus        67 pa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~~npv  146 (982)
                      ..+|||+|++||+|+|.+..      ..||||++|+++|..+.++++..||+|.|+|+||+||.||..||+..|...++.
T Consensus         5 ~~pnvv~I~~D~l~~~~l~~------~~tP~ld~La~~G~~f~~~~~~~ps~~~psrasl~TG~~p~~hGi~~n~~~~~~   78 (393)
T 2gso_A            5 TPHALLLISIDGLRADMLDR------GITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPT   78 (393)
T ss_dssp             CCCEEEEEEETTCCGGGGGS------SCCHHHHHHHHHSEEESCEECCSSCCHHHHHHHHHHCCCHHHHSCCSSSEEETT
T ss_pred             CCCeEEEEEECCCCcccccc------cCCchHHHHHhCCeeccCceeCCCCCcHHHHHHHHhCCCHHHcCCCCCccCCCC
Confidence            35699999999999999863      359999999999888888999999999999999999999999999876432221


Q ss_pred             ChhhHHhhcCC------cccccCCcchhccccCCC--CCccc-------c-CCCCCcccccccccCChhHHHHHHHHHhh
Q 002011          147 EFDSVFNQSRH------TISFGSPDIVPIFCGALP--HSTWN-------S-YPHDFEDFATDASFLDEWSFDQFQSLLNR  210 (982)
Q Consensus       147 ~~Dsvfn~s~~------~~~~Gs~~i~~lf~~~~~--~~~~~-------~-Y~~~~edf~~d~~~lD~~v~~~~~~~l~~  210 (982)
                       .+. |...++      +|+.|.+.+......|..  ...|.       . .+..+.++.  ....+...++++.+++++
T Consensus        79 -~~~-~~~~~y~t~~~gk~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~~  154 (393)
T 2gso_A           79 -LGG-FWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQ--KGVRLDTRVDAVRGWLAT  154 (393)
T ss_dssp             -TEE-ECTTCHHHHTCGGGCCSCCHHHHHHHTTCEEEESSCTTTTSCBTTBCCSBCCCCC--TTCCHHHHHHHHHHHHHC
T ss_pred             -CCc-eecCCccccccCccccCCcceechhhCCccceEEeCCCcccccCCcCCccccCcC--CCCCHHHHHHHHHHHHhc
Confidence             111 222211      233232222111111100  00010       0 111111111  111233455666667652


Q ss_pred             cCCChhHHHhhccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCC--
Q 002011          211 SNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSD--  288 (982)
Q Consensus       211 ~~~~~~L~~~~~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~--  288 (982)
                      .         .+++|+++++|+.++|+.+|.+||.+++|.++++++|+.||++++.+++.+..+||+||||||||+..  
T Consensus       155 ~---------~~~~P~fl~~~~~~~d~~~h~~g~~~~~y~~~i~~~D~~ig~ll~~L~~~g~~~nT~vi~tSDHG~~~~~  225 (393)
T 2gso_A          155 D---------GAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVA  225 (393)
T ss_dssp             C---------GGGCEEEEEEEECHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHHHHHHTCGGGEEEEEECSCCCEEEC
T ss_pred             c---------CCCCCeEEEEecCCCCccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEcCCCCCCCC
Confidence            1         13568999999999999999999999999999999999999999999999999999999999999831  


Q ss_pred             --------------------------------------------------------------------------------
Q 002011          289 --------------------------------------------------------------------------------  288 (982)
Q Consensus       289 --------------------------------------------------------------------------------  288 (982)
                                                                                                      
T Consensus       226 ~~~~i~l~~~l~~~~~~~~~~g~~~~i~~~~~~~~~~~~~l~~~~~~~~v~~~~~l~~~~~~~~~~r~gdl~v~~~~g~~  305 (393)
T 2gso_A          226 PGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWD  305 (393)
T ss_dssp             TTCEEEGGGTSCTTTEEESCCBSEEEEEECTTCHHHHHHHHSEECSSEEEEEGGGSCGGGCCSCSTTSCSEEEEECTTCE
T ss_pred             CCcEEeHHHccCHHHeEEEcCCCeEEEEeCCcchHHHHHHHhcCCCCeEEEEcccCchhhcCCCCCCCCCEEEEeeCCEE
Confidence                                                                                            


Q ss_pred             ---------------CCCCCC-CCCCCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccc
Q 002011          289 ---------------KGSHGD-GHPTNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVD  352 (982)
Q Consensus       289 ---------------~G~HG~-~s~~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~  352 (982)
                                     .|.||. ...+++++||+++|||++++..                                 ...
T Consensus       306 ~~~~~~~~~~~~~~~~g~HG~d~~~~~~~vp~i~~gp~i~~g~~---------------------------------~~~  352 (393)
T 2gso_A          306 ALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKT---------------------------------LPG  352 (393)
T ss_dssp             EECHHHHHHSCTTSCEEECCSCTTSGGGCBCEEEESTTBCSSEE---------------------------------ECC
T ss_pred             EEeccccccccCCCCCcCCCCCCCChhhhccceeECCCccCCCc---------------------------------CCC
Confidence                           156776 5567899999999999753311                                 236


Q ss_pred             cccccHHHHHHHhhCCCCCCCCCCCC--cHHhhCCCh
Q 002011          353 VNQADIAPLMSTLLGLPCPVNSVGNL--PLEYINMNE  387 (982)
Q Consensus       353 v~qiDIaPTis~LlGlpiP~ns~G~l--~~~~l~~~~  387 (982)
                      ++.+||+|||++++|+++|.+ .|++  +.++|.+..
T Consensus       353 ~~~~Di~PTi~~llgi~~p~~-dG~~~~l~~~l~~~~  388 (393)
T 2gso_A          353 FDNVDVYALMSRLLGIPAAPN-DGNPATLLPALRMPP  388 (393)
T ss_dssp             EEGGGHHHHHHHHHTCCCCSC-SSCTTTTGGGBCC--
T ss_pred             cchhhHHHHHHHHhCCCCCCC-CCChHHHHHHhcCCC
Confidence            789999999999999999987 9999  999997543


No 2  
>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*
Probab=99.95  E-value=1.6e-28  Score=305.85  Aligned_cols=203  Identities=22%  Similarity=0.259  Sum_probs=139.3

Q ss_pred             CeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCCCCCCCh
Q 002011           69 KRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWKANPVEF  148 (982)
Q Consensus        69 ~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~~npv~~  148 (982)
                      .+||||++||+|+|++...    ...||||++|+++|..+.++++..||.|.|+|+||+||.||..|||..|...+|.. 
T Consensus       110 P~vIlI~iDglR~Dyl~~~----~~~TPnLdrLA~~Gv~f~n~~~~~PSvc~PsraSLlTG~yP~~hGI~~N~~~dp~~-  184 (823)
T 4gtw_A          110 PPTLLFSLDGFRAEYLHTW----GGLLPVISKLKNCGTYTKNMRPMYPTKTFPNHYSIVTGLYPESHGIIDNKMYDPKM-  184 (823)
T ss_dssp             CCEEEEEETTCCHHHHHHS----GGGCHHHHHHHHTSEEESCEECCSSCCHHHHHHHHHHCCCHHHHSCCCSSEEETTT-
T ss_pred             CCEEEEEcCCCCHHHhCcC----cccChHHHHHHHCCcccCCeEECCCCChHHHHHHHHHcCCHHHcCcccceeecCCc-
Confidence            4799999999999998641    23599999999999999999999999999999999999999999998764332211 


Q ss_pred             hhHHh---hcC--CcccccCCcchhccccCCC--CCcccc--------CCCCCcccccccccCChhHHHHHHHHHhhcCC
Q 002011          149 DSVFN---QSR--HTISFGSPDIVPIFCGALP--HSTWNS--------YPHDFEDFATDASFLDEWSFDQFQSLLNRSNE  213 (982)
Q Consensus       149 Dsvfn---~s~--~~~~~Gs~~i~~lf~~~~~--~~~~~~--------Y~~~~edf~~d~~~lD~~v~~~~~~~l~~~~~  213 (982)
                      ...+.   ..+  ..|.-|.+.+......|..  ...|..        .+..+..+.  .....+...+++.++++..  
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ta~~~wpgs~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~l~~~--  260 (823)
T 4gtw_A          185 NASFSLKSKEKFNPLWYKGQPIWVTANHQEVKSGTYFWPGSDVEIDGILPDIYKVYN--GSVPFEERILAVLEWLQLP--  260 (823)
T ss_dssp             TEEECSSSGGGGCTTTCCSCCHHHHHHHTTCCEECSSCTTSSSCBTTBCCSBCCCCC--TTSCHHHHHHHHHHHTTSC--
T ss_pred             CccccccccccCCCccccCCchhhhHHhCCCeeEEEecCCCcccccCcCCccccccC--CCCCHHHHHHHHHHHHHhc--
Confidence            11110   000  0111121111111111100  001100        111111111  1111122345555565422  


Q ss_pred             ChhHHHhhccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCC
Q 002011          214 DPKLRKLLLQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMS  287 (982)
Q Consensus       214 ~~~L~~~~~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~  287 (982)
                             .+++|+++++|+.++|+.||.+||++++|.++++++|+.||++++.+++.+..+||++||||||||.
T Consensus       261 -------~~~~P~fl~~y~~~pD~~gH~~Gp~s~e~~~~i~~vD~~IG~ll~~L~~~gl~dnT~VI~tSDHGm~  327 (823)
T 4gtw_A          261 -------SHERPHFYTLYLEEPDSSGHSHGPVSSEVIKALQKVDRLVGMLMDGLKDLGLDKCLNLILISDHGME  327 (823)
T ss_dssp             -------TTTCCSEEEEEECTTHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHTTCTTSCEEEEECSCCCE
T ss_pred             -------ccCCCeEEEECCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEcCCCCC
Confidence                   2456899999999999999999999999999999999999999999999999999999999999984


No 3  
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=99.95  E-value=5.5e-27  Score=277.06  Aligned_cols=277  Identities=12%  Similarity=0.163  Sum_probs=190.4

Q ss_pred             CCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCC-----
Q 002011           67 PAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGW-----  141 (982)
Q Consensus        67 pa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~-----  141 (982)
                      ..+|||+|++|++|+|.+. +.+++...||||++|+++|..|.++++..|. |.|+++||+||.||..||+..+.     
T Consensus        26 ~~PNIv~I~~Ddl~~~~l~-~~g~~~~~TPnld~La~~G~~f~~~y~~~~~-c~PSrasllTG~~p~~~G~~~~~~~~~~  103 (502)
T 3ed4_A           26 KQPNLVIIMADDLGYGDLA-TYGHQIVKTPNIDRLAQEGVKFTDYYAPAPL-SSPSRAGLLTGRMPFRTGIRSWIPSGKD  103 (502)
T ss_dssp             -CCEEEEEEESSCCTTSSG-GGTCSSCCCHHHHHHHHTSEEESSEECSSSS-HHHHHHHHHHTSCGGGGTCSSCCCTTSS
T ss_pred             CCCCEEEEEeCCCCCCccc-cCCCCCCCCccHHHHHhCCcEecCcccCCCc-cHHHHHHHHHcCChhhcCCccccCCCCc
Confidence            4569999999999999985 4444556799999999999999999998886 78999999999999999986421     


Q ss_pred             ---CCCCCChhhHHhhcCC------cccc---cCCcchhccccCCCCCccccCCCC-------------------C-ccc
Q 002011          142 ---KANPVEFDSVFNQSRH------TISF---GSPDIVPIFCGALPHSTWNSYPHD-------------------F-EDF  189 (982)
Q Consensus       142 ---~~npv~~Dsvfn~s~~------~~~~---Gs~~i~~lf~~~~~~~~~~~Y~~~-------------------~-edf  189 (982)
                         ..+...+..++++.++      +|+.   |.+...+. ....+-+.+......                   + .++
T Consensus       104 ~~l~~~~~tl~~~Lk~~GY~T~~~Gkwh~~~~~~~~~~~~-p~~~GFd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (502)
T 3ed4_A          104 VALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQ-AQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGW  182 (502)
T ss_dssp             CCSCTTCCCHHHHHHTTTCEEEEEEECCSSSCTTCTTSCC-TTTTTCSEEEEECSSSCCCHHHHTCCSSSCBCCCCCCSC
T ss_pred             CCCCcchhHHHHHHHHcCCeEEEEChhcCCCCCCCCCCCC-cccCCCCeeeccccccccccccccccccccccccCcccc
Confidence               1123457778888776      2333   22110000 000000000000000                   0 001


Q ss_pred             c-------cccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCCCCC------------------
Q 002011          190 A-------TDASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAHRP------------------  244 (982)
Q Consensus       190 ~-------~d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~~gp------------------  244 (982)
                      .       ......|+.+++++.+++++.+         +++|.++++++.+.+..-+...+                  
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~---------~~~PfFl~~~~~~pH~P~~~p~~~~~~y~~~~~~~~~~~p~  253 (502)
T 3ed4_A          183 LRNGQPTPRADKMSGEYVSSEVVNWLDNKK---------DSKPFFLYVAFTEVHSPLASPKKYLDMYSQYMSAYQKQHPD  253 (502)
T ss_dssp             EETTEECCCCSSCHHHHHHHHHHHHHHTCC---------SSCCEEEEEECCTTSSSCCCCHHHHHTTGGGBCHHHHHSTT
T ss_pred             ccCCcccCCCCcccHHHHHHHHHHHHHhCC---------CCCCEEEEeCCCCCcCCCCCCHHHHHHhhhhhhhhcccCcc
Confidence            0       0011245667788888886431         34689999999888775443210                  


Q ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCC-----------CCCCCCC-----CC
Q 002011          245 ------------FSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMS-----------DKGSHGD-----GH  296 (982)
Q Consensus       245 ------------~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~-----------~~G~HG~-----~s  296 (982)
                                  ....|.++++++|++||++++.|++.+..|||+||||||||..           ..|+||.     ++
T Consensus       254 ~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g~~dnTlVIftSDHG~~~~~~~~~~~~~~~g~~~~~~g~k~~  333 (502)
T 3ed4_A          254 LFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDN  333 (502)
T ss_dssp             BCGGGCTTSCCCBSHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCCSCCCSGGGTTCCCCCTTCSCCTTC
T ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCeEEEEeCCCCCCccccccccccccccCCCcccCCCCC
Confidence                        1247999999999999999999999999999999999999942           2244442     12


Q ss_pred             --CCCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCC--
Q 002011          297 --PTNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPV--  372 (982)
Q Consensus       297 --~~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~--  372 (982)
                        ++.+++|+|+++||..++...                               ....++++||+||+++++|+++|.  
T Consensus       334 ~~e~~~rVPlii~~Pg~i~~g~~-------------------------------~~~~v~~~Di~PTll~laGi~~p~~~  382 (502)
T 3ed4_A          334 LWEGGIRVPAIIKYGKHLPQGMV-------------------------------SDTPVYGLDWMPTLAKMMNFKLPTDR  382 (502)
T ss_dssp             CSHHHHBCCEEEEETTSSCTTEE-------------------------------ECSCEEGGGHHHHHHHHHTCCCCSSS
T ss_pred             ccCcceEeeEEEEeCCcCCCCCE-------------------------------ECCeeEEehHHHHHHHHhCCCCCCCC
Confidence              245799999999984333211                               235789999999999999999986  


Q ss_pred             CCCCCCcHHhhCCC
Q 002011          373 NSVGNLPLEYINMN  386 (982)
Q Consensus       373 ns~G~l~~~~l~~~  386 (982)
                      ...|+++.+++.+.
T Consensus       383 ~~dG~sl~~~l~~~  396 (502)
T 3ed4_A          383 TFDGESLVPVLEQK  396 (502)
T ss_dssp             CCCCCCCHHHHTTC
T ss_pred             CCCCcCHHHHhcCC
Confidence            47899999999764


No 4  
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=99.95  E-value=1.6e-26  Score=273.53  Aligned_cols=356  Identities=14%  Similarity=0.167  Sum_probs=221.6

Q ss_pred             CCCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCC---
Q 002011           66 APAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWK---  142 (982)
Q Consensus        66 ppa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~---  142 (982)
                      |...|||+|++|++|++.+. +.+++...||||++|+++|..|.++++..|. |.|+++||+||+||..+|+..+..   
T Consensus         2 p~rPNIl~I~~Ddl~~~~lg-~yG~~~~~TPnlD~LA~~Gv~Ftn~y~~~p~-C~PSRasllTG~yp~~~G~~~~~~~~~   79 (502)
T 4fdi_A            2 PQPPNILLLLMDDMGWGDLG-VYGEPSRETPNLDRMAAEGLLFPNFYSANPL-XSPSRAALLTGRLPIRNGFYTTNAHAR   79 (502)
T ss_dssp             -CCCEEEEEEESSCCTTSSG-GGTCTTCCCHHHHHHHHTSEECSSEECSSSS-HHHHHHHHHHTSCHHHHTCSCCSSTTC
T ss_pred             CCCCeEEEEEecCCCCCccc-cCcCCCCCCHHHHHHHHhCcEecCcccCCCC-CcHHHHHHHHCcCccccCccccccccc
Confidence            34459999999999999885 5556666799999999999999999999987 889999999999999999865321   


Q ss_pred             -------------CCCCChhhHHhhcCC------cccccCCc-chhc---ccc----CCC-CCcccc--CCC--------
Q 002011          143 -------------ANPVEFDSVFNQSRH------TISFGSPD-IVPI---FCG----ALP-HSTWNS--YPH--------  184 (982)
Q Consensus       143 -------------~npv~~Dsvfn~s~~------~~~~Gs~~-i~~l---f~~----~~~-~~~~~~--Y~~--------  184 (982)
                                   .+...+..++++.++      +|+.|... ..|.   |..    ... .+.+..  .+.        
T Consensus        80 ~~~~~~~~~~~lp~~~~tl~~~Lk~~GY~T~~~GKwh~g~~~~~~p~~~Gfd~~~g~~~~~~~~~~~~~~~~~~~~~~~~  159 (502)
T 4fdi_A           80 NAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGKWHLGHRPQFHPLKHGFDEWFGSPNCHFGPYDNKARPNIPVYRDWE  159 (502)
T ss_dssp             CCCCCTTBSCCSCTTSCCHHHHHGGGTCEEEEEECCCSCCSGGGCGGGTTCSEEEECSSCCCCCCCSSSSCCCEEEETTE
T ss_pred             cccCccccccCCCcccchHHHHHHhcceeeEEecccccCCCCCCCcccCCCcccccCCCCCCCccccccccCcccccccc
Confidence                         122357788888877      24444321 1111   100    000 000000  000        


Q ss_pred             ----CCccc----ccccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCC-----CCCCcHHHHH
Q 002011          185 ----DFEDF----ATDASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHA-----HRPFSSIYLN  251 (982)
Q Consensus       185 ----~~edf----~~d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~-----~gp~S~~y~~  251 (982)
                          ..+..    ..+....+....+++.+++++.         .+++|.++++.+......-..     .......|.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~---------~~~~Pffl~~~~~~~h~P~~~~~~~~~~~~~~~Y~~  230 (502)
T 4fdi_A          160 MVGRYYEEFPINLKTGEANLTQIYLQEALDFIKRQ---------ARHHPFFLYWAVDATHAPVYASKPFLGTSQRGRYGD  230 (502)
T ss_dssp             EEEEBTTTBCCCTTTCBCCHHHHHHHHHHHHHHHH---------TTTSCEEEEEECCTTSSSCCBCGGGTTCCTTHHHHH
T ss_pred             ccccccccCCcccccccccchHHHHHHHHHHHHhh---------cCCCCceEEeeccCccCCccCCchhhhhhhhhhhHH
Confidence                00000    0001112233445555555421         134577777766544332211     1224578999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCC------CCCCCCC-----CC--CCCceeeEEEeCCCcCCCCCCC
Q 002011          252 NVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMS------DKGSHGD-----GH--PTNTDTPLVVWGAGVQHPKPIS  318 (982)
Q Consensus       252 ~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~------~~G~HG~-----~s--~~et~tPli~~g~Gv~~p~~~~  318 (982)
                      +++++|++||+|+++||+.+..|||+||||||||..      ..|+||.     ++  ++.+++|+|+++||..+++.. 
T Consensus       231 ~v~~~D~~vG~il~~L~~~gl~dnTiViftSDhG~~~~~~~~~~g~~g~~~~~K~~~~E~g~rVPlii~~Pg~~~~g~~-  309 (502)
T 4fdi_A          231 AVREIDDSIGKILELLQDLHVADNTFVFFTSDNGAALISAPEQGGSNGPFLCGKQTTFEGGMREPALAWWPGHVTAGQV-  309 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCTTSTTTSCCCCTTSSCCTTSSSHHHHBCCEEEECTTTSCTTEE-
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcCceEEEecCCCccccccccccCccCCCCCCCcccccCcccCcccccCCCccCCCce-
Confidence            999999999999999999999999999999999963      2245541     22  244899999999986554321 


Q ss_pred             CCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCC--CCCCCcHHhhCCChhHHHHHHHH
Q 002011          319 ETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVN--SVGNLPLEYINMNEAENAEALLA  396 (982)
Q Consensus       319 ~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~n--s~G~l~~~~l~~~~~~~a~a~~~  396 (982)
                                                    ....++++||+||+++|+|+++|.+  .+|+++.+.|.+.+.......+.
T Consensus       310 ------------------------------~~~~vs~~Di~PTll~laG~~~p~~~~~dG~sl~p~L~~~~~~~r~~~~~  359 (502)
T 4fdi_A          310 ------------------------------SHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQGRLMDRPIFYY  359 (502)
T ss_dssp             ------------------------------CCCCEETTHHHHHHHHHHTCCCCSSSCCCCCCCHHHHHHCCCCCCCEEEE
T ss_pred             ------------------------------eecccccccHHHHHHHHhCCCCCCCCCcCCeehHHHhcCCCCCCCceEEE
Confidence                                          2357899999999999999999974  68999999874321100000000


Q ss_pred             H---HHHH---------------HHHHHHhhccc--cC----Cccc---cccCCChhhhHHHHHHHHHhhc-cccHHHHH
Q 002011          397 N---TKQI---------------LNQFLRKSHIK--QT----NSFY---FKPFKPLVHYSSILDRIEGLIS-LRDYEMAM  448 (982)
Q Consensus       397 N---a~Qi---------------l~~y~~k~~~~--~~----~~l~---~~p~~~l~~~~~~~~~i~~l~~-~~~y~~ai  448 (982)
                      +   ...+               .+.+.......  ..    ....   ..+-+.|.++++++.|.++|.. ..+|.+.+
T Consensus       360 ~~~~~~avr~g~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eLyDL~~DP~E~~NLa~~~pe~~~~l  439 (502)
T 4fdi_A          360 RGDTLMAATLGQHKAHFWTWTNSWENFRQGIDFCPGQNVSGVTTHNLEDHTKLPLIFHLGRDPGERFPLSFASAEYQEAL  439 (502)
T ss_dssp             ETTEEEEEEETTEEEESEECSCCHHHHHTTCCSSTTBCCTTTSCSSCEECSSSCEEEETTTCTTCCSCCCTTSHHHHHHH
T ss_pred             ecCceeEEEcCCceEEeeeccCcccccccccccccccccccccccccccCCCCCccccCCcCcchhccccCCchhHHHHH
Confidence            0   0000               00011000000  00    0000   0111236889999999999865 46899999


Q ss_pred             HHHHHHHHHHHhhcc
Q 002011          449 KLSENLRSLALQGLH  463 (982)
Q Consensus       449 ~~s~~l~~~~l~gl~  463 (982)
                      ++.++.++.-.+.+.
T Consensus       440 ~~l~~~l~~~~~~~~  454 (502)
T 4fdi_A          440 SRITSVVQQHQEALV  454 (502)
T ss_dssp             HHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhhCC
Confidence            988888888888873


No 5  
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=99.94  E-value=4.1e-26  Score=269.25  Aligned_cols=276  Identities=15%  Similarity=0.139  Sum_probs=190.2

Q ss_pred             CeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccc-cCCCC----
Q 002011           69 KRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVT-KGWKA----  143 (982)
Q Consensus        69 ~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~-~g~~~----  143 (982)
                      .|||+|++|++|++.+. +.+++...||||++|+++|..|.++++..|. |.|+++||+||.||..||+. .|+..    
T Consensus         3 PNIv~I~~Ddl~~~~l~-~~G~~~~~TPnld~La~~G~~F~~~y~~~~~-c~PSRasllTG~~p~~~g~~~~~~~~~~~~   80 (489)
T 1auk_A            3 PNIVLIFADDLGYGDLG-CYGHPSSTTPNLDQLAAGGLRFTDFYVPVSL-XTPSRAALLTGRLPVRMGMYPGVLVPSSRG   80 (489)
T ss_dssp             CEEEEEEESSCCTTTSG-GGTCSSCCCHHHHHHHHTSEEESSEECSSSS-HHHHHHHHHHSSCGGGGTCCSSCCCTTBSC
T ss_pred             CeEEEEEeCCCCCcccC-cCCCCCCCCcHHHHHHhcCcEeeccccCCCC-CChHHHHHHHCCCccccCCcCCCcCCCccC
Confidence            59999999999999874 4444455799999999999999999998885 99999999999999999997 55321    


Q ss_pred             ----CCCChhhHHhhcCC------cccccC---Ccchh---cccc--C--CCCCccc-----cCCCC-------------
Q 002011          144 ----NPVEFDSVFNQSRH------TISFGS---PDIVP---IFCG--A--LPHSTWN-----SYPHD-------------  185 (982)
Q Consensus       144 ----npv~~Dsvfn~s~~------~~~~Gs---~~i~~---lf~~--~--~~~~~~~-----~Y~~~-------------  185 (982)
                          +...+..++++.++      +|+.|.   +...|   -|..  +  ...+.|.     .++..             
T Consensus        81 ~l~~~~~tl~~~Lk~~GY~T~~~GKwh~g~~~~~~~~p~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (489)
T 1auk_A           81 GLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPEGAFLPPHQGFHRFLGIPYSHDQGPCQNLTCFPPATPCDGGCDQGLVP  160 (489)
T ss_dssp             BSCTTSCCHHHHHHTTTCEEEEEECCCSBCCGGGTTSGGGGTCSEEEECSSCTTSSBCTTSEEETTTEECTTCBSCSSCC
T ss_pred             CCCCccchHHHHHHHCCCeEEEEecccCCCCCCCCCCCCcCCCCccccCCcccccccccccccCCccccccccccccccC
Confidence                23457778888776      244443   11111   1110  0  0000000     00100             


Q ss_pred             ---Cccc--c---cccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCC---CC--CCcHHHHHH
Q 002011          186 ---FEDF--A---TDASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHA---HR--PFSSIYLNN  252 (982)
Q Consensus       186 ---~edf--~---~d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~---~g--p~S~~y~~~  252 (982)
                         +++.  .   .+....|..+++++.+++++.        ..+++|.++++++.+.+..-+.   +.  .....|.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~--------~~~~kPfFl~~~~~~pH~P~~~p~~~~~~~~~~~Y~~~  232 (489)
T 1auk_A          161 IPLLANLSVEAQPPWLPGLEARYMAFAHDLMADA--------QRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDS  232 (489)
T ss_dssp             CCEEETTEEEEBSCCGGGHHHHHHHHHHHHHHHH--------HHTTCCEEEEEECCTTSSSCCCCTTTTTTSSSHHHHHH
T ss_pred             CccccCCccccCCCccccchHHHHHHHHHHHHhc--------ccCCCCEEEEeCCCCCCCCCCCChhhccccchhHHHHH
Confidence               0000  0   001123445567777777531        1134688999998877654332   21  124689999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCC-----CCCCCC-----CCCC--CceeeEEEeCCCcCCCCCCCCC
Q 002011          253 VKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSD-----KGSHGD-----GHPT--NTDTPLVVWGAGVQHPKPISET  320 (982)
Q Consensus       253 i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~-----~G~HG~-----~s~~--et~tPli~~g~Gv~~p~~~~~~  320 (982)
                      ++++|++||++++.|++.+..|||+||||||||...     .|+||.     ++..  .+++|+|+++||..+++ .   
T Consensus       233 v~~~D~~vG~ll~~L~~~gl~dnTiViftSDhG~~~~~~~~~g~~g~~~~~K~~~~e~g~rVPlii~~Pg~i~~g-~---  308 (489)
T 1auk_A          233 LMELDAAVGTLMTAIGDLGLLEETLVIFTADNGPETMRMSRGGCSGLLRCGKGTTYEGGVREPALAFWPGHIAPG-V---  308 (489)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCGGGGGGSCCCTTSCCCTTSSSHHHHBCCCEEECTTTSCSE-E---
T ss_pred             HHHHHHHHHHHHHHHHHcCCcCCeEEEEeCCCCccccccCCCCcccccCCCccCccCCceeEEEEEecCCCCCCC-c---
Confidence            999999999999999999999999999999999752     467763     2332  38999999999854332 1   


Q ss_pred             CCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCC-CCCCCcHHhhCCC
Q 002011          321 NHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVN-SVGNLPLEYINMN  386 (982)
Q Consensus       321 ~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~n-s~G~l~~~~l~~~  386 (982)
                                                  ....++++||+||+++++|++.|.. .+|+++.++|.+.
T Consensus       309 ----------------------------~~~~vs~~Di~PTll~laG~~~p~~~~dG~sl~~~l~g~  347 (489)
T 1auk_A          309 ----------------------------THELASSLDLLPTLAALAGAPLPNVTLDGFDLSPLLLGT  347 (489)
T ss_dssp             ----------------------------ECSCEEGGGHHHHHHHHHTCCCCSSCCSCCCCHHHHHTS
T ss_pred             ----------------------------cCCceeeehHHHHHHHHhCCCCCCCCCCCcCHHHHhcCC
Confidence                                        1357899999999999999999953 5899999998653


No 6  
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94  E-value=1.4e-26  Score=272.86  Aligned_cols=344  Identities=14%  Similarity=0.162  Sum_probs=223.7

Q ss_pred             CCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCC-----
Q 002011           68 AKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWK-----  142 (982)
Q Consensus        68 a~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~-----  142 (982)
                      ..|||+|++|++|++.+. +.+++...||||++|+++|..|.++++..|. |.|+++||+||.||..||+..|..     
T Consensus        16 ~PNIv~I~~Ddl~~~~l~-~~G~~~~~TPnld~La~~G~~F~~~y~~~~~-c~PSrasllTG~~p~~~g~~~~~~~~~~~   93 (482)
T 3b5q_A           16 KPNFLIIQCDHLTQRVVG-AYGQTQGCTLPIDEVASRGVIFSNAYVGCPL-SQPSRAALWSGMMPHQTNVRSNSSEPVNT   93 (482)
T ss_dssp             CCEEEEEEETTCCTTTSG-GGSSCCSSCHHHHHHHHTSEEBSCBBCSCSS-HHHHHHHHHHTCCHHHHTCCSSCCTTTSC
T ss_pred             CCCEEEEEeCCCCccccc-cCCCCCCCCchHHHHHhcCeEEeceEcCCCC-cHHHHHHHHhCCCcccCCCcccCCccccc
Confidence            459999999999999874 4444555799999999999999999988886 999999999999999999876532     


Q ss_pred             ---CCCCChhhHHhhcCC-cccccCCcchhccccCCCCCccccCC---CCC-cc-cc-cccccCChhHHHHHHHHHhhcC
Q 002011          143 ---ANPVEFDSVFNQSRH-TISFGSPDIVPIFCGALPHSTWNSYP---HDF-ED-FA-TDASFLDEWSFDQFQSLLNRSN  212 (982)
Q Consensus       143 ---~npv~~Dsvfn~s~~-~~~~Gs~~i~~lf~~~~~~~~~~~Y~---~~~-ed-f~-~d~~~lD~~v~~~~~~~l~~~~  212 (982)
                         .+...+..++++.++ +..+|.-..   ++.   ...++.+.   ..+ .. .. ......|..+++++.+++++. 
T Consensus        94 ~l~~~~~tl~~~Lk~~GY~T~~~Gkwh~---~g~---~~GFd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~-  166 (482)
T 3b5q_A           94 RLPENVPTLGSLFSESGYEAVHFGKTHD---MGS---LRGFKHKEPVAKPFTDPEFPVNNDSFLDVGTCEDAVAYLSNP-  166 (482)
T ss_dssp             CCCTTSCCHHHHHHHTTCEEEEEECCCC---TTT---TTTSEEECCCCCCCCCSSSCCCHHHHHHHHHHHHHHHHHTSC-
T ss_pred             cCCCCcchHHHHHHHcCCeEEEEeeccC---CCC---CCCCcccCCCCCCCcCCcCCcCCcccccHHHHHHHHHHHHhC-
Confidence               123457778888776 222221110   000   01111110   000 00 00 001123455667777777531 


Q ss_pred             CChhHHHhhccCCeEEEEeccCCCCCC-----------------------------CCCCCC------------------
Q 002011          213 EDPKLRKLLLQDKLVIFLHLLGCDSNG-----------------------------HAHRPF------------------  245 (982)
Q Consensus       213 ~~~~L~~~~~~d~~v~flhllglD~~G-----------------------------H~~gp~------------------  245 (982)
                               +++|.++++++.+.+..-                             +.+.+.                  
T Consensus       167 ---------~~~Pffl~~~~~~pH~P~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~y~~~~~~~~~~~~~~~~~~p~~  237 (482)
T 3b5q_A          167 ---------PKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRMTQAAH  237 (482)
T ss_dssp             ---------SCSSEEEEEEECTTTTHHHHHHHTCSSCCCCCCSSCCCCCCTTCSCSCGGGSCHHHHTHHHHCHHHHHHTT
T ss_pred             ---------CCCCeEEEECCCCCcCcccccccccccccccccccccccCCCchhHHhhccccccCcccccccccccCCcc
Confidence                     345888889987765421                             112221                  


Q ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCC---CC-C--CCCceeeEEEeCCC
Q 002011          246 ---------SSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHG---DG-H--PTNTDTPLVVWGAG  310 (982)
Q Consensus       246 ---------S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG---~~-s--~~et~tPli~~g~G  310 (982)
                               ...|.++++++|++||++++.|++.+..|||+||||||||.. .|+||   ++ +  ++.+++|+|+++||
T Consensus       238 ~~~~~~~~~~~~Y~~~i~~~D~~vG~ll~~L~~~g~~dnTiVIftSDHG~~-~g~~g~~gk~~~~~e~~~rVPlii~~Pg  316 (482)
T 3b5q_A          238 WNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDG-MASHRMVTKHISFYDEMTNVPFIFAGPG  316 (482)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTGGGEEEEEEESCCCC-TTGGGCCSCSSCCCHHHHBCCEEEESTT
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCeEEEEECCCCcc-cccccccccCCccccccceeeEEEECCC
Confidence                     146899999999999999999999999999999999999984 46665   22 2  24579999999998


Q ss_pred             cCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCcccccccc--ccHHHHHHHhhCCCCCCCCCCCCcHHhhCCChh
Q 002011          311 VQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQ--ADIAPLMSTLLGLPCPVNSVGNLPLEYINMNEA  388 (982)
Q Consensus       311 v~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~q--iDIaPTis~LlGlpiP~ns~G~l~~~~l~~~~~  388 (982)
                      +.++...                               ....+++  +||+||+++++|+++|....|+++.+++.+...
T Consensus       317 ~~~~g~~-------------------------------~~~~vs~~~~Di~PTll~laG~~~p~~~dG~sl~~~l~g~~~  365 (482)
T 3b5q_A          317 IKQQKKP-------------------------------VDHLLTQPTLDLLPTLCDLAGIAVPAEKAGISLAPTLRGEKQ  365 (482)
T ss_dssp             CCCCSSC-------------------------------BCSSCBCHHHHHHHHHHHHHTCCCCTTCCCCCCHHHHTTCCC
T ss_pred             CCCCCcE-------------------------------eccccccccccHHHHHHHHhCCCCCCCCCCccHHHHhcCCCC
Confidence            7643211                               1357899  999999999999999999999999999976432


Q ss_pred             HH-HHHHHHHHHHHHHHHH---HhhccccCCccc-cccC--CChhhhHHHHHHHHHhhccccHHHHHHHHHHHHHHHHhh
Q 002011          389 EN-AEALLANTKQILNQFL---RKSHIKQTNSFY-FKPF--KPLVHYSSILDRIEGLISLRDYEMAMKLSENLRSLALQG  461 (982)
Q Consensus       389 ~~-a~a~~~Na~Qil~~y~---~k~~~~~~~~l~-~~p~--~~l~~~~~~~~~i~~l~~~~~y~~ai~~s~~l~~~~l~g  461 (982)
                      .. .+.++..... -.++.   ...-...+..+. +.+-  ..|.++++++.|.+++.++..|++.+++.++.+..-++.
T Consensus       366 ~~~r~~~~~~~~~-~~~~~~~~~~air~~~~K~i~~~~~~~~eLydl~~DP~E~~nla~~~~~~~~~~~l~~~l~~~~~~  444 (482)
T 3b5q_A          366 KKSHPYVVSEWHS-EYEYVTTPGRMVRGPRYKYTHYLEGNGEELYDMKKDPGERKNLAKDPKYSKILAEHRALLDDYITR  444 (482)
T ss_dssp             CSCCSSEEEEEEE-SSSSSEEEEEEEECSSEEEEEETTTTEEEEEETTTCTTCCCCCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEecC-ccccccCCceEEEcCCEEEEEECCCCcCeeccCCCCcchhhccccCccHHHHHHHHHHHHHHHHHH
Confidence            10 0111100000 00000   000001111111 1111  236888899999999999999988888877777665554


Q ss_pred             c
Q 002011          462 L  462 (982)
Q Consensus       462 l  462 (982)
                      .
T Consensus       445 ~  445 (482)
T 3b5q_A          445 S  445 (482)
T ss_dssp             H
T ss_pred             h
Confidence            4


No 7  
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2
Probab=99.94  E-value=1.1e-25  Score=270.08  Aligned_cols=351  Identities=15%  Similarity=0.146  Sum_probs=219.3

Q ss_pred             CCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCC------
Q 002011           68 AKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGW------  141 (982)
Q Consensus        68 a~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~------  141 (982)
                      ..|||+|++|++|++.+. +.+++...||||++|+++|..|.++++..|. |.|+++||+||.||..||+..+.      
T Consensus         5 kPNIl~I~~Ddl~~~~lg-~yG~~~~~TPnlD~LA~~G~~F~n~y~~~p~-C~PSRasllTG~yp~~~G~~~~~~~~~~~   82 (562)
T 1p49_A            5 RPNIILVMADDLGIGDPG-CYGNKTIRTPNIDRLASGGVKLTQHLAASPL-XTPSRAAFMTGRYPVRSGMASWSRTGVFL   82 (562)
T ss_dssp             CCEEEEEEESSCCTTSSG-GGTCSSSCCHHHHTTTTTSEEESSEECSCCC--CHHHHHHHHSSCGGGGTCSCSSSCCSCC
T ss_pred             CCcEEEEEeCCCCCchhh-hcCCCCCCCChHHHHHhCCcEEecccccCCc-CCcccceeecCCCccccCCcccccccccc
Confidence            359999999999999874 4445556799999999999999999998886 99999999999999999986542      


Q ss_pred             --------CCCCCChhhHHhhcCC------cccccCCc-------chhccccCCCCCccccCCC------------CCcc
Q 002011          142 --------KANPVEFDSVFNQSRH------TISFGSPD-------IVPIFCGALPHSTWNSYPH------------DFED  188 (982)
Q Consensus       142 --------~~npv~~Dsvfn~s~~------~~~~Gs~~-------i~~lf~~~~~~~~~~~Y~~------------~~ed  188 (982)
                              ..+...+..+++++++      +|+.|...       ..|. ..|  -+.+..++.            .+.+
T Consensus        83 ~~~~~~~l~~~~~tl~~~Lk~aGY~T~~~GKwHlg~~~~~~~~~~~~p~-~~G--Fd~~~g~~~~~~~~~~~~~~~~~~~  159 (562)
T 1p49_A           83 FTASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPL-HHG--FNYFYGISLTNLRDCKPGEGSVFTT  159 (562)
T ss_dssp             CTTCCCCSCTTCCCHHHHHHHTTCEEEEEEECCSCCCSSSTTTCTTSGG-GTT--CSEEEEESSCCCGGGSTTCCTTSHH
T ss_pred             ccccccCCCcccchHHHHHHHcCCceeeecccccCCcccccCcccCCCC-cCC--CceeeccccccccccccCcCCccCc
Confidence                    1123457788888877      24444211       0010 000  011000000            0000


Q ss_pred             ---------------------------------------------------------------c---------ccccccC
Q 002011          189 ---------------------------------------------------------------F---------ATDASFL  196 (982)
Q Consensus       189 ---------------------------------------------------------------f---------~~d~~~l  196 (982)
                                                                                     .         ..+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  239 (562)
T 1p49_A          160 GFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQPMSYDNL  239 (562)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEETTEEEEESCCCTTH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCccccCccccccc
Confidence                                                                           0         0000011


Q ss_pred             ChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002011          197 DEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHA---H--RPFSSIYLNNVKVVDHIAKRMYFLLEDYF  271 (982)
Q Consensus       197 D~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~---~--gp~S~~y~~~i~~vD~~Ig~il~~l~~~~  271 (982)
                      |..+++++.+++++          .+++|.++++++...+..-+.   +  ......|.++++++|++||++++.|++.+
T Consensus       240 ~~~~~~~a~~~i~~----------~~~~Pffl~~~~~~~H~P~~~~~~~~~~~~~~~y~~~v~~~D~~vG~il~~L~~~g  309 (562)
T 1p49_A          240 TQRLTVEAAQFIQR----------NTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDELR  309 (562)
T ss_dssp             HHHHHHHHHHHHHT----------TTTSCEEEEEECCTTSSSCCCCTTTSSCCSSSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHh----------cCCCCeEEEecCCCCcCCCCCChhHhCcchHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            22334444444432          124588888888776554221   1  11235789999999999999999999999


Q ss_pred             CCCCEEEEEEcCCCCCCC----------CCCC-----CCC--CCCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCC
Q 002011          272 KDNRTAYIFTADHGMSDK----------GSHG-----DGH--PTNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHA  334 (982)
Q Consensus       272 ~~~~TliI~TSDHGm~~~----------G~HG-----~~s--~~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g  334 (982)
                      ..|||+||||||||....          |+||     +++  ++.+++|+|+++||..++...                 
T Consensus       310 ~~dnTiviftsDhG~~~~~~~~~~~~~g~~~~~~~g~K~~~~e~~~rvP~ii~~P~~~~~g~~-----------------  372 (562)
T 1p49_A          310 LANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQK-----------------  372 (562)
T ss_dssp             CGGGEEEEEEESSCCCTTCBCSSSCBCSCCCTTCCCCTTSSSHHHHCCCEEEECTTTSCTTCE-----------------
T ss_pred             CccCeEEEEECCCCcccccccccccccCccCCCccCCccCccCCceEEeEEEecCCcCCCCce-----------------
Confidence            999999999999997431          1121     111  235799999999985433211                 


Q ss_pred             CCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCC--CCCCCCcHHhhCCChhH-HHHHHH---HHH-HHHHH----
Q 002011          335 HDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPV--NSVGNLPLEYINMNEAE-NAEALL---ANT-KQILN----  403 (982)
Q Consensus       335 ~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~--ns~G~l~~~~l~~~~~~-~a~a~~---~Na-~Qil~----  403 (982)
                                    ....++++||+||+++++|++.|.  ...|+++.++|.+.... ..+.++   .+. ..+..    
T Consensus       373 --------------~~~~~~~~Di~PTll~l~G~~~p~~~~~dG~sl~~~L~g~~~~~~~~~~~~~~~~~~~~~r~~~~~  438 (562)
T 1p49_A          373 --------------IDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQRSDHEFLFHYCNAYLNAVRWHPQN  438 (562)
T ss_dssp             --------------ECSCEEGGGHHHHHHHHHTCCCCSSSCCCCCCCHHHHTTSCSSCSCSEEEEEETTEEEEEEECCTT
T ss_pred             --------------ECCceeeeHHHHHHHHHhCCCCCCCCCcCCeEHHHHhcCCCCCCCCceEEEecCCcceeeEeccCC
Confidence                          235689999999999999999998  47999999999764311 000100   000 00000    


Q ss_pred             ---HHHHhhccc-----c-------------CCccccccCCChhhhHHHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHh
Q 002011          404 ---QFLRKSHIK-----Q-------------TNSFYFKPFKPLVHYSSILDRIEGLISL--RDYEMAMKLSENLRSLALQ  460 (982)
Q Consensus       404 ---~y~~k~~~~-----~-------------~~~l~~~p~~~l~~~~~~~~~i~~l~~~--~~y~~ai~~s~~l~~~~l~  460 (982)
                         .|+......     .             .....+..-+.|.++++++.|.+++.++  ++|.+.+++.++.+..-.+
T Consensus       439 ~~~~wK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eLYDL~~DP~E~~NLa~~~~p~~~e~~~~L~~~l~~~~~  518 (562)
T 1p49_A          439 STSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRERNPLTPASEPRFYEILKVMQEAADRHTQ  518 (562)
T ss_dssp             CCCCEEEESCCCCCSCC----CTTTSSCCSSSTTCCCCSSCEEEETTTCTTCCSCCCSTTTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCcceeEEecccccCccccccccccccccccccccccCCCceeeeCCCChhhhcccccccchhHHHHHHHHHHHHHHHHH
Confidence               010000000     0             0000000112468899999999999887  8899999888888877666


Q ss_pred             hccc
Q 002011          461 GLHY  464 (982)
Q Consensus       461 gl~y  464 (982)
                      .+.-
T Consensus       519 ~~~~  522 (562)
T 1p49_A          519 TLPE  522 (562)
T ss_dssp             SCCC
T ss_pred             hccC
Confidence            6543


No 8  
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=99.94  E-value=9e-26  Score=266.35  Aligned_cols=276  Identities=16%  Similarity=0.200  Sum_probs=190.8

Q ss_pred             CCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCC-----
Q 002011           67 PAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGW-----  141 (982)
Q Consensus        67 pa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~-----  141 (982)
                      ..+|||+|++|++|+|.+. +.+++...||||++|+++|..|.++++..|. |.|+++||+||.||..+|+..+.     
T Consensus        26 ~~PNIv~I~~Ddl~~~~l~-~~G~~~~~TPnld~La~~G~~f~~~y~~~~~-c~PSrasllTG~~p~~~g~~~~~~~~~~  103 (491)
T 2qzu_A           26 PTPNLVFIMADQYRGDAIG-CIGKEPVKTPHLDKLASEGINFTNAISSYPV-SSPARGMLMTGMYPIGSKVTGNCNSETA  103 (491)
T ss_dssp             SSCEEEEEEETTCCTTCCG-GGCSSCCCCHHHHHHHHTSEEETTCBCSSCS-HHHHHHHHHHCSCHHHHCCCSCCSTTTG
T ss_pred             CCCCEEEEEeCCCCccchh-hccCCCCCCcHHHHHHhcCcEEeceecCCCc-ccHHHHHHHhCCCcccCCccccccccCc
Confidence            3569999999999999874 4444455799999999999999999988886 99999999999999999986542     


Q ss_pred             ------CCCCCChhhHHhhcCC------cccccCCc--------------chhccc--cCCCCCccccCCCC---Ccc-c
Q 002011          142 ------KANPVEFDSVFNQSRH------TISFGSPD--------------IVPIFC--GALPHSTWNSYPHD---FED-F  189 (982)
Q Consensus       142 ------~~npv~~Dsvfn~s~~------~~~~Gs~~--------------i~~lf~--~~~~~~~~~~Y~~~---~ed-f  189 (982)
                            ..+...+..++++.++      +|+.|..+              +.....  ...+-+.|..+...   ... +
T Consensus       104 ~~~~~l~~~~~tl~~~Lk~~GY~T~~~Gkwh~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~Gfd~~~~~~~~~~~~~~~~  183 (491)
T 2qzu_A          104 PYGVELSQNARCWSDVLKDQGYNMGYIGKWHLDAPYKPYVDTYNNRGKVAWNEWCPPERRHGFDHWIAYGTYDYHLKPMY  183 (491)
T ss_dssp             GGTCSCCTTCCCHHHHHHHTTCEEEEEEECCCSCCCSSCCSSGGGSSSCCCCCCCCGGGSTTCCEEEEESCCCCTTSCEE
T ss_pred             ccCCCCCcccchHHHHHHHCCCeEEEEccccCCCccccccccccccccccccccCCccccCCCceeeccCCCcccCCCcc
Confidence                  1223457778888876      23433211              000000  00001111110000   000 0


Q ss_pred             c-c---------ccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCC-C-------CCCCC------
Q 002011          190 A-T---------DASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNG-H-------AHRPF------  245 (982)
Q Consensus       190 ~-~---------d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~G-H-------~~gp~------  245 (982)
                      . .         .....|..+++++.+++++..        .+++|.++++++.+.+..- +       .|.+.      
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~--------~~~~PfFl~~~~~~pH~P~~~~p~~~~~~y~~~~~~~~~  255 (491)
T 2qzu_A          184 WNTTAPRDSFYYVNQWGPEYEASKAIEYINGQK--------DQKQPFALVVSMNPPHTGYELVPDRYKEIYKDLDVEALC  255 (491)
T ss_dssp             BCTTCCTTCCEECSSCHHHHHHHHHHHHHHTTT--------TCSSCEEEEEEECTTSSCTTCSCHHHHHTTTTCCHHHHT
T ss_pred             ccCCCcccccccccCcccHHHHHHHHHHHHhcc--------cCCCCeEEEeCCCCCCCccccCCHHHHhhhccCCccccc
Confidence            0 0         001234556777888876411        1345888999887766543 1       12211      


Q ss_pred             --------------------cHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCCC---CC--CCCc
Q 002011          246 --------------------SSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHGD---GH--PTNT  300 (982)
Q Consensus       246 --------------------S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG~---~s--~~et  300 (982)
                                          .+.|.++++++|++||++++.|++.+..|||+||||||||.. .|+||.   ++  ++.+
T Consensus       256 ~~~p~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~L~~~g~~dnTiIiftSDHG~~-~g~~g~~~K~~~~e~~~  334 (491)
T 2qzu_A          256 KGRPDIPAKGTEMGDYFRNNIRNYYACITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGIC-MGAHENAGKDIFYEESM  334 (491)
T ss_dssp             TTCTTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTEEEEEECSCCCC-TTGGGCSSCCSSSHHHH
T ss_pred             ccCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCeEEEEECcCCcc-cccccCCCCCCcccccc
Confidence                                246999999999999999999999999999999999999984 466653   22  2357


Q ss_pred             eeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCcccccccc-ccHHHHHHHhhCCC--CCCCCCCC
Q 002011          301 DTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQ-ADIAPLMSTLLGLP--CPVNSVGN  377 (982)
Q Consensus       301 ~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~q-iDIaPTis~LlGlp--iP~ns~G~  377 (982)
                      ++|+++++||..+++.                                ....+++ +||+||+++++|++  +|....|+
T Consensus       335 rVPlii~~Pg~~~g~~--------------------------------~~~~vs~~~Di~PTll~laG~~~~~p~~~dG~  382 (491)
T 2qzu_A          335 RIPMILSWPDQIKPRK--------------------------------SDPLMIAFADLYPTLLSMMGFSKEIPETVQTF  382 (491)
T ss_dssp             BCCEEEECTTTCCCEE--------------------------------EECCCCBGGGHHHHHHHHTTCGGGSCTTCCSC
T ss_pred             ccCeEEECCCCCCCce--------------------------------echhhhhchhHHHHHHHHcCCCCCCCCCCCCc
Confidence            9999999998652211                                2357899 99999999999999  99999999


Q ss_pred             CcHHhhCC
Q 002011          378 LPLEYINM  385 (982)
Q Consensus       378 l~~~~l~~  385 (982)
                      ++.+.+.+
T Consensus       383 sl~~~l~~  390 (491)
T 2qzu_A          383 DLSNEVLT  390 (491)
T ss_dssp             CCHHHHHH
T ss_pred             cHHHHHCC
Confidence            99999854


No 9  
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=99.93  E-value=1.2e-25  Score=267.86  Aligned_cols=275  Identities=15%  Similarity=0.146  Sum_probs=185.0

Q ss_pred             CCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCC------
Q 002011           68 AKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGW------  141 (982)
Q Consensus        68 a~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~------  141 (982)
                      ..|||+|++|++|++.+. +.++. ..||||++|+++|..|.++++ .|. |.|+++||+||.||..+|+..+.      
T Consensus         4 ~PNIl~I~~Ddl~~~~l~-~~G~~-~~TPnlD~LA~~G~~F~~~y~-~~~-c~PSRasllTG~~p~~~g~~~~~~~~~~~   79 (536)
T 1hdh_A            4 RPNFLVIVADDLGFSDIG-AFGGE-IATPNLDALAIAGLRLTDFHT-AST-XSPTRSMLLTGTDHHIAGIGTMAEALTPE   79 (536)
T ss_dssp             CCEEEEEEESSCCTTCSG-GGTCC-SCCHHHHHHHHHSEEESSEEC-CSS-HHHHHHHHTTSSCHHHHTCSSCGGGCCTT
T ss_pred             CCeEEEEEECCCCcchhh-ccCCC-CCCchHHHHHhcCceecceec-ccc-cCcchhhhhcccccccccccccccccccc
Confidence            469999999999999874 44443 569999999999999999887 565 89999999999999999986431      


Q ss_pred             -----------CCCCCChhhHHhhcCC------cccccCCc-chh---cccc-----CCCCCccccCCCC----------
Q 002011          142 -----------KANPVEFDSVFNQSRH------TISFGSPD-IVP---IFCG-----ALPHSTWNSYPHD----------  185 (982)
Q Consensus       142 -----------~~npv~~Dsvfn~s~~------~~~~Gs~~-i~~---lf~~-----~~~~~~~~~Y~~~----------  185 (982)
                                 ..+...+..+++++++      +|+.|... ..|   -|..     ....+.+...+..          
T Consensus        80 ~~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~GKwh~g~~~~~~p~~~GFd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (536)
T 1hdh_A           80 LEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKG  159 (536)
T ss_dssp             TTTCTTCSSSCCSSSCCHHHHHHTTTCEEEEEEECCSCSSGGGSTTTTTCSEEEEECSSCCCTTCCCCCCSTTSCHHHHT
T ss_pred             ccCCCcccccCCcccccHHHHHHHCCCeEEEeccccCCCCCCCCCcCCCCCeeecccCCCcccCCCCccccccccccccC
Confidence                       0122456778888776      24443211 111   1100     0000111000000          


Q ss_pred             -Ccccccc---------cccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCC-------CC-----
Q 002011          186 -FEDFATD---------ASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHA-------HR-----  243 (982)
Q Consensus       186 -~edf~~d---------~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~-------~g-----  243 (982)
                       ...+..+         ....|..+++++.+++++.+         +++|.++++++...+..-+.       |.     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~i~~~~---------~~kPFFl~~~~~~pH~P~~~p~~~~~~y~~~~~~  230 (536)
T 1hdh_A          160 TPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERD---------QSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDA  230 (536)
T ss_dssp             CCCCEEETTEECSCCCTTCCHHHHHHHHHHHHHHTSC---------TTSCEEEEEECCTTSSSCCCCHHHHGGGTTTTTT
T ss_pred             CCcccccCCEecccCCCCcccHHHHHHHHHHHHHhcC---------CCCCeEEEecCCCCcCCCcCCHHHHHHhcccccc
Confidence             0000000         01235567788888886421         34588888888776543111       00     


Q ss_pred             -------------------C-----------------C-----------cHHHHHHHHHHHHHHHHHHHHHHhccCCCCE
Q 002011          244 -------------------P-----------------F-----------SSIYLNNVKVVDHIAKRMYFLLEDYFKDNRT  276 (982)
Q Consensus       244 -------------------p-----------------~-----------S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~T  276 (982)
                                         |                 .           .+.|.++++++|++||++++.|++.+..|||
T Consensus       231 ~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~L~~~g~~dnT  310 (536)
T 1hdh_A          231 GPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNT  310 (536)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCTTCCCCCCCCSSCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGE
T ss_pred             chhhhhhHHHhhhhhcCccCcccccCccccccccccccCHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCe
Confidence                               0                 0           1358999999999999999999999999999


Q ss_pred             EEEEEcCCCCCCC-----CCCCC------------------------------------------CCC--CCceeeEEEe
Q 002011          277 AYIFTADHGMSDK-----GSHGD------------------------------------------GHP--TNTDTPLVVW  307 (982)
Q Consensus       277 liI~TSDHGm~~~-----G~HG~------------------------------------------~s~--~et~tPli~~  307 (982)
                      +||||||||....     |.||.                                          ++.  +.++||||++
T Consensus       311 iIiftSDhG~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~w~~~~~~p~~~~K~~~~E~g~rVPlii~  390 (536)
T 1hdh_A          311 FVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVR  390 (536)
T ss_dssp             EEEEEESSSCCCCCGGGCGGGCSSHHHHHHHHCCCSGGGTTSTTCCCCCHHHHHHHHHTTSSSCTTSSSHHHHBCCEEEE
T ss_pred             EEEEECcCCCcccccccccccccccccccccccccccccccccccccccccccccccCCccccccCcccCCCceeeEEEE
Confidence            9999999997521     33331                                          111  3579999999


Q ss_pred             CCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCCC---------CCCC
Q 002011          308 GAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVNS---------VGNL  378 (982)
Q Consensus       308 g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~ns---------~G~l  378 (982)
                      +||..++...                               ....++++||+||+++++|+++|...         .|++
T Consensus       391 ~Pg~~~~g~~-------------------------------~~~~vs~~Di~PTll~laG~~~p~~~~~g~~~~~~dG~S  439 (536)
T 1hdh_A          391 YPRLSRQGAI-------------------------------SHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRS  439 (536)
T ss_dssp             CTTSSCCSSE-------------------------------ECCCEEGGGHHHHHHHHHTCCCCCSEETTEECCCCSSCC
T ss_pred             cCCcCCCCCe-------------------------------ECCceeehHHHHHHHHHhCCCCCccccccCccCCCCCcc
Confidence            9986543211                               23578999999999999999999875         9999


Q ss_pred             cHHhhCCC
Q 002011          379 PLEYINMN  386 (982)
Q Consensus       379 ~~~~l~~~  386 (982)
                      +.++|.+.
T Consensus       440 l~p~l~~~  447 (536)
T 1hdh_A          440 WLGWLSGE  447 (536)
T ss_dssp             SHHHHTTS
T ss_pred             hHHHhcCC
Confidence            99999764


No 10 
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=99.93  E-value=4.8e-25  Score=260.21  Aligned_cols=270  Identities=15%  Similarity=0.141  Sum_probs=182.2

Q ss_pred             CCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCC-----
Q 002011           68 AKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWK-----  142 (982)
Q Consensus        68 a~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~-----  142 (982)
                      ..|||+|++|++|++.+. +.+ +...||||++|+++|..|.++++ .| .|.|+++||+||.||..+|+..+..     
T Consensus         3 ~PNIv~I~~Ddl~~~~l~-~~g-~~~~TPnld~La~~G~~F~~~y~-~~-~c~PsRasllTG~~p~~~g~~~~~~~~~~~   78 (492)
T 1fsu_A            3 PPHLVFLLADDLGWNDVG-FHG-SRIRTPHLDALAAGGVLLDNYYT-QP-LXTPSRSQLLTGRYQIRTGLQHQIIWPCQP   78 (492)
T ss_dssp             CCEEEEEEESSCCTTSSG-GGT-CSSCCHHHHHHHHTSEEETTEEC-CC-C-CHHHHHHHHCSCHHHHTCCSSCCCTTCC
T ss_pred             CCcEEEEEeCCCCCcccC-CCC-CCCCCCcHHHHHhcCcEecccee-CC-CCCHHHHHHHHcCChhhhCCCCcccCCCCc
Confidence            359999999999998875 333 34569999999999999999997 45 4889999999999999999764311     


Q ss_pred             ----CCCCChhhHHhhcCC------cccccCCc--chhccccCCCCCcccc--------CCCC----C---------ccc
Q 002011          143 ----ANPVEFDSVFNQSRH------TISFGSPD--IVPIFCGALPHSTWNS--------YPHD----F---------EDF  189 (982)
Q Consensus       143 ----~npv~~Dsvfn~s~~------~~~~Gs~~--i~~lf~~~~~~~~~~~--------Y~~~----~---------edf  189 (982)
                          .+...+..+++++++      +|+.|...  ..|. ..|  -+.+..        |...    +         .++
T Consensus        79 ~~l~~~~~tl~~~Lk~~GY~T~~~gkwh~g~~~~~~~p~-~~G--fd~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (492)
T 1fsu_A           79 SCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRKECLPT-RRG--FDTYFGYLLGSEDYYSHERCTLIDALNVTRCALDF  155 (492)
T ss_dssp             CCSCTTCCCHHHHHHHTTCEEEEEECCCSCCSSGGGSGG-GTT--CSEEEECSSSCCCTTTCEEEEEEGGGTEEEEEECC
T ss_pred             CCCCcccchHHHHHHHCCCcEEEecccccCCCCCCCCCc-cCC--CCccccccCCCccccCCcccccccccccccccccc
Confidence                122457778888876      23333211  1110 000  011100        1100    0         000


Q ss_pred             cc--------ccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCC-------CCC----CcHHHH
Q 002011          190 AT--------DASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHA-------HRP----FSSIYL  250 (982)
Q Consensus       190 ~~--------d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~-------~gp----~S~~y~  250 (982)
                      ..        .....|...++++.+++++..         +++|.++++++.+.+..-+.       ++.    ....|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~---------~~~Pffl~~~~~~pH~P~~~p~~~~~~~~~~~~~~~~~Y~  226 (492)
T 1fsu_A          156 RDGEEVATGYKNMYSTNIFTKRAIALITNHP---------PEKPLFLYLALQSVHEPLQVPEEYLKPYDFIQDKNRHHYA  226 (492)
T ss_dssp             EETTEECCSCTTCCHHHHHHHHHHHHHHTCC---------TTSCEEEEEECCTTSSSCCCCGGGTGGGTTCCSHHHHHHH
T ss_pred             ccCCccccCCCCCcchHHHHHHHHHHHHhcC---------CCCCEEEEeCCCCCcCCCcCCHHHHHhhcCcccchHHHHH
Confidence            00        001123445677777776321         24588899998776653321       111    135799


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCC--------CCC--CCCceeeEEEeCCCcCCCCCCCCC
Q 002011          251 NNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHG--------DGH--PTNTDTPLVVWGAGVQHPKPISET  320 (982)
Q Consensus       251 ~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG--------~~s--~~et~tPli~~g~Gv~~p~~~~~~  320 (982)
                      ++++++|++||++++.|++.+..|||+||||||||... |.||        +++  ++.+++|+++++||+.+++..   
T Consensus       227 ~~v~~~D~~vG~ll~~L~~~g~~dnTiviftSDhG~~~-~~~~~~~~l~g~K~~~~e~~~rVPlii~~P~~~~~g~~---  302 (492)
T 1fsu_A          227 GMVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDNGGQT-LAGGNNWPLRGRKWSLWEGGVRGVGFVASPLLKQKGVK---  302 (492)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCG-GGTCCCTTSSCCTTSSSHHHHBCCEEEECTTCSSCSEE---
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCccCEEEEEECCCCCCc-cCCCCCCCcCCCCCCccCCCeeeEEEEECCCcCCCCce---
Confidence            99999999999999999999999999999999999742 2222        122  234799999999986543211   


Q ss_pred             CCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCC--CCCCCCCcHHhhCC
Q 002011          321 NHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCP--VNSVGNLPLEYINM  385 (982)
Q Consensus       321 ~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP--~ns~G~l~~~~l~~  385 (982)
                                                  ....++++||+||+++++|++.|  ...+|+++.++|.+
T Consensus       303 ----------------------------~~~~vs~~Di~PTll~laG~~~p~~~~~dG~sl~~~l~~  341 (492)
T 1fsu_A          303 ----------------------------NRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWKTISE  341 (492)
T ss_dssp             ----------------------------ECSCEEGGGHHHHHHHHTTCCCTTSCCCCCCCCHHHHHH
T ss_pred             ----------------------------ecCceeeeHHHHHHHHHhCCCCCCCCCcCCccHHHHHcC
Confidence                                        23578999999999999999999  67899999998853


No 11 
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=99.93  E-value=1.2e-25  Score=268.34  Aligned_cols=349  Identities=14%  Similarity=0.105  Sum_probs=222.2

Q ss_pred             CCeEEEEEECCCCcccccCCCCC-----CCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCC
Q 002011           68 AKRLVLFVADGLRADKFYEPDSE-----GNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWK  142 (982)
Q Consensus        68 a~rVVlIviDGLRaD~l~~~~~~-----~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~  142 (982)
                      .+|||+|++|++|+|.+. +.++     +...||||++|+++|..|.++++..|. |.|+++||+||.||..||+..|..
T Consensus        32 ~PNIl~I~~Ddl~~~~l~-~~G~~~~~~~~~~TPnlD~LA~~G~~F~~~y~~~~~-c~PSRasllTG~~p~~~g~~~~~~  109 (543)
T 2vqr_A           32 KKNVLLIVVDQWRADFVP-HVLRADGKIDFLKTPNLDRLCREGVTFRNHVTTCVP-XGPARASLLTGLYLMNHRAVQNTV  109 (543)
T ss_dssp             CCEEEEEEESSCCTTSCH-HHHHHTTCCCCSCCHHHHHHHHHSEEEEEEECSSCS-HHHHHHHHHHCCCHHHHCCCSTTS
T ss_pred             CCCEEEEEeCCCCccchh-hccCcccccccCcCchHHHHHhcCeeecceEecCCC-CCccccceecccCccccCCccCCC
Confidence            469999999999999874 2223     345699999999999999999998886 999999999999999999876432


Q ss_pred             ---CCCCChhhHHhhcCC------cccccCCc-chh----cccc-CCCCCcccc---C--------------C-----CC
Q 002011          143 ---ANPVEFDSVFNQSRH------TISFGSPD-IVP----IFCG-ALPHSTWNS---Y--------------P-----HD  185 (982)
Q Consensus       143 ---~npv~~Dsvfn~s~~------~~~~Gs~~-i~~----lf~~-~~~~~~~~~---Y--------------~-----~~  185 (982)
                         .+...+..++++.++      +|+.|... -.+    .... ......++.   +              +     ..
T Consensus       110 ~l~~~~~tl~~~Lk~aGY~T~~~GKwh~~~~~~~~~~~~~~~~~~~~~~~GFd~~~~~~~~~~~y~~~~~~~g~~~~~~~  189 (543)
T 2vqr_A          110 PLDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTSPNDPRFRVLGDLMDGFHPVGAFEPNMEGYFGWVAQNGFDLPEHR  189 (543)
T ss_dssp             BCCTTSCCHHHHHHTTTCCEEEEECCCBBCCTTSSCTTCGGGSSSCBCCTTCEEEEECCGGGHHHHHHHHHTTCCCCSSG
T ss_pred             cCCcccCcHHHHHHHCCCEEEEEccccccCcccccccccccccccccCCCCccccccccccccchHHHHHhcCccccccc
Confidence               234567788888876      23433211 000    0000 000001110   0              0     00


Q ss_pred             Cccc-----------------ccccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCC-------C
Q 002011          186 FEDF-----------------ATDASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGH-------A  241 (982)
Q Consensus       186 ~edf-----------------~~d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH-------~  241 (982)
                      +.++                 ..+....|.++++++.+++++.          +++|.++++++.+.+..-+       .
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~l~~~----------~~kPFFl~~~~~~pH~P~~~p~~~~~~  259 (543)
T 2vqr_A          190 PDIWLPEGEDAVAGATDRPSRIPKEFSDSTFFTERALTYLKGR----------DGKPFFLHLGYYRPHPPFVASAPYHAM  259 (543)
T ss_dssp             GGGGSBSSTTCCSSSCSSCBSSCGGGSHHHHHHHHHHHHHHHH----------TTSCCEEEEECCTTSSSCCCCTTGGGS
T ss_pred             hhhhcccccccccccccCcccccccccchHHHHHHHHHHHHhC----------CCCCeEEEeCCCCCcCCCCCChHHHhh
Confidence            0000                 0001123456677777777532          2468899999877654321       1


Q ss_pred             CCC----------------------------------------------------CcHHHHHHHHHHHHHHHHHHHHHHh
Q 002011          242 HRP----------------------------------------------------FSSIYLNNVKVVDHIAKRMYFLLED  269 (982)
Q Consensus       242 ~gp----------------------------------------------------~S~~y~~~i~~vD~~Ig~il~~l~~  269 (982)
                      |.+                                                    ....|.++++++|++||++++.|++
T Consensus       260 y~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~  339 (543)
T 2vqr_A          260 YRPEDMPAPIRAANPDIEAAQHPLMKFYVDSIRRGSFFQGAEGSGATLDEAELRQMRATYCGLITEVDDCLGRVFSYLDE  339 (543)
T ss_dssp             SCGGGSCCCCCCSSHHHHHTTCHHHHHHHHHCBGGGTSTTCCSBGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcccCCCCccccccccccccChhhhhhhhccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            110                                                    0135889999999999999999999


Q ss_pred             ccCCCCEEEEEEcCCCCCCCCCCCCC---C--CCCceeeEEEeCCCcCC-CCCCCCCCCCCCCcccccCCCCCCCCCCCC
Q 002011          270 YFKDNRTAYIFTADHGMSDKGSHGDG---H--PTNTDTPLVVWGAGVQH-PKPISETNHSDCGFLFIDEHAHDMPTPSEW  343 (982)
Q Consensus       270 ~~~~~~TliI~TSDHGm~~~G~HG~~---s--~~et~tPli~~g~Gv~~-p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w  343 (982)
                      .+..|||+||||||||.. .|.||-+   +  ++.+++|||+++||..+ +..                           
T Consensus       340 ~gl~dnTiIiftSDHG~~-~g~~~~~~K~~~~e~~~rVPlii~~P~~~~~~g~---------------------------  391 (543)
T 2vqr_A          340 TGQWDDTLIIFTSDHGEQ-LGDHHLLGKIGYNDPSFRIPLVIKDAGENARAGA---------------------------  391 (543)
T ss_dssp             TTCGGGEEEEEEESCCCC-TTGGGCCSSCSSCHHHHBCCEEEECSSSCTTTTC---------------------------
T ss_pred             cCCcCCeEEEEECcCCcc-ccccccccCcCcccccceeeEEEEeCCccccCCc---------------------------
Confidence            999999999999999974 4566522   2  24479999999998653 211                           


Q ss_pred             CCCCccccccccccHHHHHHHhhCCCCCCCCCCCCcHHhhCCChhH-HHHHHHHHH-------HHHHHHHHHh-----hc
Q 002011          344 GLNGIERVDVNQADIAPLMSTLLGLPCPVNSVGNLPLEYINMNEAE-NAEALLANT-------KQILNQFLRK-----SH  410 (982)
Q Consensus       344 ~l~~~~~~~v~qiDIaPTis~LlGlpiP~ns~G~l~~~~l~~~~~~-~a~a~~~Na-------~Qil~~y~~k-----~~  410 (982)
                          .....++++||+||+++++|+++|....|+++.++|.+.... ..+.++.+.       .+..+++...     ..
T Consensus       392 ----~~~~~vs~~Di~PTll~laG~~~p~~~dG~sl~p~l~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  467 (543)
T 2vqr_A          392 ----IESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGRPQDWRTELHYEYDFRDVYYSEPQSFLGLGMNDCSLC  467 (543)
T ss_dssp             ----EEEEEEEGGGHHHHHHHHTTCCCCTTCSCCCCHHHHTTCSCTTCCSSEEEEEECCCBTTBCCHHHHTCCGGGCEEE
T ss_pred             ----cccCccchhhHHHHHHHHhCCCCCCCCCCEeHHHHhcCCCCCCCcceEEEEeeccccccccchhhcccccccccee
Confidence                124578999999999999999999889999999999764321 001111000       0000011000     00


Q ss_pred             cccCCccccc----cCCChhhhHHHHHHHHHhhccccHHHHHHHHHHHHHHHHh
Q 002011          411 IKQTNSFYFK----PFKPLVHYSSILDRIEGLISLRDYEMAMKLSENLRSLALQ  460 (982)
Q Consensus       411 ~~~~~~l~~~----p~~~l~~~~~~~~~i~~l~~~~~y~~ai~~s~~l~~~~l~  460 (982)
                      .-....++|.    .-+.|.++++++.|.+++.++.+|.+.+++.++.+..-.+
T Consensus       468 air~~~~K~i~~~~~~~eLydl~~DP~E~~NLa~~p~~~~~~~~l~~~l~~~~~  521 (543)
T 2vqr_A          468 VIQDERYKYVHFAALPPLFFDLRHDPNEFTNLADDPAYAALVRDYAQKALSWRL  521 (543)
T ss_dssp             EEECSSEEEEEESSSCCEEEETTTCTTCCCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCEEEEEeCCCchhccCCCCCcchhhccccChhHHHHHHHHHHHHHHHHH
Confidence            0001112221    1224688999999999999888898877776666554443


No 12 
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=99.93  E-value=2.9e-25  Score=259.15  Aligned_cols=272  Identities=17%  Similarity=0.147  Sum_probs=191.9

Q ss_pred             CCCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCCCC-
Q 002011           66 APAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWKAN-  144 (982)
Q Consensus        66 ppa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~~n-  144 (982)
                      ...+|||+|++|++|+|.+.. .++ ...||+|++++++|..|.+.++. ++.|.|++.|++||.+|..++...+.... 
T Consensus        83 ~~~pNIvlI~~Dsl~~~~l~~-~g~-~~~tP~ld~La~~g~~F~~~ys~-~~~t~ps~~sllTG~~p~~~~~~~~~~~~~  159 (450)
T 3lxq_A           83 GKRKNLVILLQESLGAQFVGS-LGG-LPLTPNLDELMQEGWQFTQMYAT-GTRSVRGIEAVTTGFPPSPSRAVVKLSKSQ  159 (450)
T ss_dssp             SSCCEEEEEEETTCCGGGCGG-GTS-CSCCHHHHHHHHTSEEESSEECS-CSSHHHHHHHHHTCCCCCSSCCTTSCSGGG
T ss_pred             CCCCcEEEEEeCCCCcchhhh-cCC-CCCCccHHHHHhcCcccccccCC-CCCChHHHHHHHhCCCCCCCCceeecCCCC
Confidence            445799999999999999853 233 34699999999998888888875 45699999999999999999865433221 


Q ss_pred             --CCChhhHHhhcCCc-ccc--cCCcch---hccccCCCCCcccc---CCCCCcccccccccCChhHHHHHHHHHhhcCC
Q 002011          145 --PVEFDSVFNQSRHT-ISF--GSPDIV---PIFCGALPHSTWNS---YPHDFEDFATDASFLDEWSFDQFQSLLNRSNE  213 (982)
Q Consensus       145 --pv~~Dsvfn~s~~~-~~~--Gs~~i~---~lf~~~~~~~~~~~---Y~~~~edf~~d~~~lD~~v~~~~~~~l~~~~~  213 (982)
                        ...+.+++++.++. ..+  |...+.   ..+... +-+.+..   |..  .++.......|+.+++++.+++++.. 
T Consensus       160 ~~~~tl~~~Lk~~GY~T~~~~gg~~~~~~~~~~~~~~-Gfd~~~~~~~~~~--~~~~~~~g~~d~~~~~~~~~~l~~~~-  235 (450)
T 3lxq_A          160 TGFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGN-GFDQIVEEKNYTN--PGFVGSWGVSDEDLYNKADEEFERLS-  235 (450)
T ss_dssp             SSBCCHHHHHHHTTCEEEEEESSCTTGGGHHHHHHHT-TCCEEECGGGCSS--CSCEETTEECHHHHHHHHHHHHHHHT-
T ss_pred             cccccHHHHHHhcCCCeEEEeCCCcCcCchhhhhhhC-CCCEEecccccCC--CcccCCCCCCHHHHHHHHHHHHHHhc-
Confidence              23566777777662 222  222111   111100 0111110   111  01111222356778888888876311 


Q ss_pred             ChhHHHhhccCCeEEEEeccCCCC-------CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCC
Q 002011          214 DPKLRKLLLQDKLVIFLHLLGCDS-------NGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGM  286 (982)
Q Consensus       214 ~~~L~~~~~~d~~v~flhllglD~-------~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm  286 (982)
                             .+++|.++++|+.+.+.       ..|.++.....|.++++++|+.||++++.+++.+..+||+||+|||||+
T Consensus       236 -------~~~~Pffl~l~~~~~H~P~~~p~~~~~~~~~~~~~y~~~v~~~D~~ig~~l~~L~~~g~~~nTlvI~tsDHG~  308 (450)
T 3lxq_A          236 -------KGDKPFFSLVFTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDA  308 (450)
T ss_dssp             -------TSSSCEEEEEECCSSSTTCCCCSSSSCCSSSSSSCHHHHHHHHHHHHHHHHHHHTTSSSGGGEEEEEEESCCS
T ss_pred             -------cCCCCEEEEecCCCCcCCCccCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCeEEEEECCCCc
Confidence                   13458888998876543       2344445557899999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhh
Q 002011          287 SDKGSHGDGHPTNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLL  366 (982)
Q Consensus       287 ~~~G~HG~~s~~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~Ll  366 (982)
                      . .|.|+....+.+++|+++||||++ ++.                                ....++|+||+||+++++
T Consensus       309 ~-~~~~~~~~~~~~~vP~ii~~p~~~-~~~--------------------------------~~~~~s~~Di~PTll~l~  354 (450)
T 3lxq_A          309 R-VFGANLVPVKHFHIPALIIGKDIQ-PRK--------------------------------DDRIANNIDMPPTLLSLI  354 (450)
T ss_dssp             C-CCSCCSCCGGGGEECEEEECTTCC-CEE--------------------------------ECCCEEGGGHHHHHHHHT
T ss_pred             c-cCCCCCCccccceEeEEEECCCCC-Cce--------------------------------eCCccchhhHHHHHHHHh
Confidence            5 445665556679999999999864 321                                135789999999999999


Q ss_pred             CCCCCCCCCCCCcHHhhCC
Q 002011          367 GLPCPVNSVGNLPLEYINM  385 (982)
Q Consensus       367 GlpiP~ns~G~l~~~~l~~  385 (982)
                      |++.|....|+++.+.+.+
T Consensus       355 G~~~~~~~~G~sL~~~l~~  373 (450)
T 3lxq_A          355 GVDAKTPMIGRDLTKPLAR  373 (450)
T ss_dssp             TCCEEECCCSCCTTSCCCG
T ss_pred             CCCCCCCccCeeCCCCCCC
Confidence            9999999999998887754


No 13 
>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}
Probab=99.92  E-value=8.3e-26  Score=268.00  Aligned_cols=212  Identities=18%  Similarity=0.210  Sum_probs=139.4

Q ss_pred             CCCeEEE-EEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeC-CCCCCchhhHHHhhCCCCCCcccccC-CCC
Q 002011           67 PAKRLVL-FVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHAR-PPTESRPGHVAIIAGFYEDPSAVTKG-WKA  143 (982)
Q Consensus        67 pa~rVVl-IviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~-~PT~T~P~~~SL~TG~yP~~hgV~~g-~~~  143 (982)
                      +..|+|+ |++|++|+|.+.. .++ .. +|+|++|+++|..|.++++. .|+.|.|+|+||+||.||..||+..| |..
T Consensus        38 ~~PniVv~I~~D~l~~d~l~~-~g~-~~-tP~ldrLa~~G~~f~~a~~~~~~~~c~Psrasl~TG~~P~~hGi~~n~~~d  114 (565)
T 3q3q_A           38 TPPKLIVAISVDQFSADLFSE-YRQ-YY-TGGLKRLTSEGAVFPRGYQSHAATETCPGHSTILTGSRPSRTGIIANNWFD  114 (565)
T ss_dssp             SCCSEEEEEEETTCCHHHHHH-HGG-GC-CSHHHHHHHHSEEEEEEECCSSCCSHHHHHHHHTTSCCHHHHCCCSSEEEC
T ss_pred             CCCCEEEEEEECCCCHHHHHH-hcC-CC-ChHHHHHHHcCcEEeCeecCCCCCCchHHHHHHHHCcCHHHcCcccccccc
Confidence            3457777 9999999999842 222 34 99999999999999999886 58899999999999999999999865 221


Q ss_pred             ----------------------------CC--CChhhHHhhcCC------cccccCCcchhccccCCC---------CCc
Q 002011          144 ----------------------------NP--VEFDSVFNQSRH------TISFGSPDIVPIFCGALP---------HST  178 (982)
Q Consensus       144 ----------------------------np--v~~Dsvfn~s~~------~~~~Gs~~i~~lf~~~~~---------~~~  178 (982)
                                                  .|  ....++-++.+.      .+..+..|-..+...|..         ...
T Consensus       115 ~~~~~~~~~v~~~~D~~~~~~g~~~~~~sp~~l~~~Ti~d~Lka~~~~skv~~va~kdr~ail~aGh~a~~a~W~d~~~g  194 (565)
T 3q3q_A          115 LDAKREDKNLYCAEDESQPGSSSDKYEASPLHLKVPTLGGRMKAANPATRVVSVAGKDRAAIMMGGATADQVWWLGGPQG  194 (565)
T ss_dssp             TTCSSSCCEEETTBCTTSTTCBTTBCCBCSTTCCSCCHHHHHHHHCTTCCEEEEESSHHHHHHHHCTTCSEEEEECSTTC
T ss_pred             cchhhcCceEEeeccccccccCCcccCCChhhhcCCcHHHHHHhcCCCcEEEEEecCcccccccCCcccCeeeEecCCCC
Confidence                                        11  112333333320      000000010000000000         000


Q ss_pred             ccc-CCCC------------------C------cc--------------------cc---------cccccCChhHHHHH
Q 002011          179 WNS-YPHD------------------F------ED--------------------FA---------TDASFLDEWSFDQF  204 (982)
Q Consensus       179 ~~~-Y~~~------------------~------ed--------------------f~---------~d~~~lD~~v~~~~  204 (982)
                      |-+ |.+.                  |      +.                    |.         ......|+++.+.+
T Consensus       195 fstyy~~~~p~w~~~~n~~~~~~~~~w~~~~~~~~y~~~~~~~~~~g~~~~~~~~f~~~~~~~~~~~~sp~~D~~v~~~A  274 (565)
T 3q3q_A          195 YVSYKGVAPTPLVTQVNQAFAQRLAQPNPGFELPAQCVSKDFPVQAGNRTVGTGRFARDAGDYKGFRISPEQDAMTLAFA  274 (565)
T ss_dssp             EECSTTCCCCHHHHHHHHHHHHHHTSCBCCCCCCGGGGGGCCCEEETTEEESCCCCCBCTTCHHHHHSSHHHHHHHHHHH
T ss_pred             ccccccccCcHHHHHHhhccccccccccccccccccccccccccccccccccCcccccccccccccccChHHHHHHHHHH
Confidence            111 1100                  0      00                    00         01112466666666


Q ss_pred             HHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCC
Q 002011          205 QSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADH  284 (982)
Q Consensus       205 ~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDH  284 (982)
                      .+.+++.+      .-.+++|+++++|+.++|+.||.+||+|+++.++++++|+.|+++++.+++.+  ++|++|+||||
T Consensus       275 ~~~l~~~~------l~~~~~pdll~vy~~~~D~~gH~~Gp~S~e~~~~l~~lD~~lg~Ll~~l~~~~--~~t~vivtSDH  346 (565)
T 3q3q_A          275 AAAIENMQ------LGKQAQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLDKDG--IDYVVVLTADH  346 (565)
T ss_dssp             HHHHHHTT------TTSSSSCEEEEEEECHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEECSC
T ss_pred             HHHHHhcc------cCCCCCCCEEEEEcCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEEEcCC
Confidence            66665321      01235799999999999999999999999999999999999999999999876  69999999999


Q ss_pred             CCCCC
Q 002011          285 GMSDK  289 (982)
Q Consensus       285 Gm~~~  289 (982)
                      ||.+.
T Consensus       347 G~~~~  351 (565)
T 3q3q_A          347 GGHDL  351 (565)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99753


No 14 
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*
Probab=99.91  E-value=9e-25  Score=271.01  Aligned_cols=199  Identities=18%  Similarity=0.219  Sum_probs=139.6

Q ss_pred             CCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCCCCCC
Q 002011           67 PAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWKANPV  146 (982)
Q Consensus        67 pa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~~npv  146 (982)
                      ..+|||+|++||+|+|.+...    ...||||++|+++|..+..+++..|+.|.|+|+||+||.||..|||..|...++.
T Consensus       126 ~~pnVllI~iDglr~d~l~~~----~~~tPnLd~La~~Gv~~~~~~~~~Ps~T~PsraSLlTG~yP~~HGI~~n~~~d~~  201 (831)
T 3nkq_A          126 VRPPLIIFSVDGFRASYMKKG----SKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPV  201 (831)
T ss_dssp             CSCCEEEEEEETCCGGGGGGG----GGTCHHHHHHHHHSEECSCEECCSSCSHHHHHHHHHHSCCHHHHSCCSSSEEETT
T ss_pred             CCCcEEEEEECCCChHhhhhh----ccCChHHHHHHHCCccccccEecCCCCcHHHHHHHhcCcCccccccccCcccccc
Confidence            467999999999999998642    2249999999999888888999999999999999999999999999876543331


Q ss_pred             ChhhHHhhcCC----cccccCCcc-hhccccCCCCCccccCCCCCcccccccccCChhHHHHHHHHHhhcCCChhHHHhh
Q 002011          147 EFDSVFNQSRH----TISFGSPDI-VPIFCGALPHSTWNSYPHDFEDFATDASFLDEWSFDQFQSLLNRSNEDPKLRKLL  221 (982)
Q Consensus       147 ~~Dsvfn~s~~----~~~~Gs~~i-~~lf~~~~~~~~~~~Y~~~~edf~~d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~  221 (982)
                       .+..+.....    ...|+.+.+ ...-..|.   +...+  .+   . .....++ ..+++.++++..         .
T Consensus       202 -~~~~~~~~~~~~~~~~~~~g~piw~~~~~~G~---~ta~~--~w---p-g~~~~~~-~v~~~~~~l~~~---------~  261 (831)
T 3nkq_A          202 -FDATFHLRGREKFNHRWWGGQPLWITATKQGV---RAGTF--FW---S-VSIPHER-RILTILQWLSLP---------D  261 (831)
T ss_dssp             -TTEEECSSSSGGGSGGGCCSCCHHHHHHHTTC---CBCCS--CC---C-TTSCHHH-HHHHHHHHHTSC---------T
T ss_pred             -ccccccccccccCCcccccCCcHHHHHHHcCC---ceEEE--eC---C-CCCCHHH-HHHHHHHHHhcc---------c
Confidence             1111211100    001121111 11111110   00000  00   0 0111122 234445555321         1


Q ss_pred             ccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCC
Q 002011          222 LQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDK  289 (982)
Q Consensus       222 ~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~  289 (982)
                      +++|+++++|+.++|+.||.+||.+++|.++++++|+.||++++.|++.++.+||+|||||||||++.
T Consensus       262 ~~~P~f~~ly~~~~D~~gH~~Gp~s~ey~~al~~vD~~IG~Ll~~Lk~~GL~dnT~VI~TSDHGm~~v  329 (831)
T 3nkq_A          262 NERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDV  329 (831)
T ss_dssp             TTCCSEEEEEEEEEHHHHHHHCTTCGGGHHHHHHHHHHHHHHHHHHHHTTCTTTCEEEEEESCCCEEC
T ss_pred             ccCCceEEEecCCcchhccccCCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEEcCCCCCCC
Confidence            35689999999999999999999999999999999999999999999999999999999999999643


No 15 
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=99.89  E-value=2.7e-22  Score=233.38  Aligned_cols=269  Identities=14%  Similarity=0.148  Sum_probs=178.4

Q ss_pred             CCCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHc--CcccceeeeCCCCCCchhhHHH--hhCCCCCCcccccC-
Q 002011           66 APAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQN--QGCWGVSHARPPTESRPGHVAI--IAGFYEDPSAVTKG-  140 (982)
Q Consensus        66 ppa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~--gg~~~~s~t~~PT~T~P~~~SL--~TG~yP~~hgV~~g-  140 (982)
                      +..+|||+|++|++|++.+. +.+++...||||++|+++  |..|.++++..|. |.|+.+++  +||.||..+|+..+ 
T Consensus        29 ~~~pNII~I~~Dsl~~~~l~-~~g~~~~~TP~ld~La~~~~g~~F~n~ys~~~~-~~~sra~~~llTG~~p~~~g~~~~~  106 (436)
T 2w8d_A           29 AEGKNVIYVSLESLQSFIID-YKIDGKEVTPFLNKLAHDNETFYFDNFFHQTGQ-GKTSDAEFMMENSLYPLAQGSVFVN  106 (436)
T ss_dssp             TTTCEEEEEEETTCCGGGTT-CEETTEESSHHHHHHHHSSSCEEESSEECCCCT-THHHHHHHHHHHSCCCCSSSCHHHH
T ss_pred             CCCCcEEEEEECCCChhhcc-CcCCCCcCCchHHHHHhcCCeEEECceeccCCC-CCcchhHHHHHhCCCCCCCCcceee
Confidence            34579999999999999874 333344569999999999  8889999998887 66666654  49999999997532 


Q ss_pred             C-CCCCCChhhHHhhcCCc-cccc--CCcchh---ccccCCCCCcccc---CCCCCcccccccccCChhHHHHHHHHHhh
Q 002011          141 W-KANPVEFDSVFNQSRHT-ISFG--SPDIVP---IFCGALPHSTWNS---YPHDFEDFATDASFLDEWSFDQFQSLLNR  210 (982)
Q Consensus       141 ~-~~npv~~Dsvfn~s~~~-~~~G--s~~i~~---lf~~~~~~~~~~~---Y~~~~edf~~d~~~lD~~v~~~~~~~l~~  210 (982)
                      . ..+...+..++++.++. ..++  .+...+   .+.. .+-+.+..   |+.. ++........|..+++++.+++++
T Consensus       107 ~~~~~~~tl~~~Lk~~GY~T~~~h~~~~~~~~~~~~~~~-~Gfd~~~~~~~~~~~-~~~~~~~g~~d~~~~~~a~~~l~~  184 (436)
T 2w8d_A          107 KAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKA-EGIDKFFDSAYYDMN-EENTKNYGMKDKPFFKESMPLLES  184 (436)
T ss_dssp             CTTSCCCCHHHHGGGGTCEEEEEESSCTTGGGHHHHHHH-TTCCEEECGGGSCCC-GGGBCSSSBCHHHHHHHHHHHHHT
T ss_pred             cCCCchhHHHHHHHHCCCcEEEEeCCCcCcCChhhhhhc-CCCceeecHhhCCCC-cccccCCCCChHHHHHHHHHHHhh
Confidence            1 12234577888887762 2221  111100   0000 00111111   1100 000011123466777888887752


Q ss_pred             cCCChhHHHhhccCCeEEEEeccCCCCCCCCCC------------CCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEE
Q 002011          211 SNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAHR------------PFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAY  278 (982)
Q Consensus       211 ~~~~~~L~~~~~~d~~v~flhllglD~~GH~~g------------p~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~Tli  278 (982)
                                 .++|.++++++.+.+..-+...            .....|.+.++++|++||++++.+++.+..+||+|
T Consensus       185 -----------~~kPffl~l~~~~~H~P~~~p~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~Lk~~gl~dnTiI  253 (436)
T 2w8d_A          185 -----------LPQPFYTKFITLSNHFPFGMDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSII  253 (436)
T ss_dssp             -----------SCSSEEEEEECCSSCTTCCCCTTSCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTEEE
T ss_pred             -----------cCCCeEEEEcCCCCcCCCCCCcccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCeEE
Confidence                       2458888888876554322111            11246999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCC--------CC--CCCC--C--ceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCC
Q 002011          279 IFTADHGMSDKGSH--------GD--GHPT--N--TDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWG  344 (982)
Q Consensus       279 I~TSDHGm~~~G~H--------G~--~s~~--e--t~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~  344 (982)
                      |||||||.. .|.|        |.  ++..  .  +++||++|+|| .++..                            
T Consensus       254 v~tsDHG~~-~~~~~~~~~~~~g~k~~~~~e~~~~~rVPlii~~Pg-~~g~~----------------------------  303 (436)
T 2w8d_A          254 VMYGDHYGI-SENHNKAMAKVLGKDEITDYDNAQLQRVPLFIHAAG-VKGEK----------------------------  303 (436)
T ss_dssp             EEEECSCSS-CGGGHHHHHHHTTCSCCCHHHHHHTTBCCEEEEETT-SCCCE----------------------------
T ss_pred             EEECCCCcc-cccchhhHHHhhCCCCCCcccccccceEeEEEEeCC-CCCce----------------------------
Confidence            999999963 2333        32  2332  2  69999999998 43321                            


Q ss_pred             CCCccccccccccHHHHHHHhhCCCCCCC-CCCCCcHHhh
Q 002011          345 LNGIERVDVNQADIAPLMSTLLGLPCPVN-SVGNLPLEYI  383 (982)
Q Consensus       345 l~~~~~~~v~qiDIaPTis~LlGlpiP~n-s~G~l~~~~l  383 (982)
                          ....++++||+||+++++|++.|.. ..|+++.+..
T Consensus       304 ----~~~~~s~~Di~PTll~l~Gi~~p~~~~~G~sLl~~~  339 (436)
T 2w8d_A          304 ----VHKYAGDVDVAPTILHLLGVDTKDYLMSGSDILSKE  339 (436)
T ss_dssp             ----ECCCEEGGGHHHHHHHHTTCCCTTSCCCCCCTTSTT
T ss_pred             ----eccchhHHhHHHHHHHHcCCCCCcccccCcccCCCC
Confidence                2357899999999999999999964 5799876654


No 16 
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=99.88  E-value=2.6e-22  Score=232.67  Aligned_cols=268  Identities=12%  Similarity=0.111  Sum_probs=176.3

Q ss_pred             CCCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHc--Cc-ccceeeeCCCCCCchhh--HHHhhCCCCCCcccccC
Q 002011           66 APAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQN--QG-CWGVSHARPPTESRPGH--VAIIAGFYEDPSAVTKG  140 (982)
Q Consensus        66 ppa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~--gg-~~~~s~t~~PT~T~P~~--~SL~TG~yP~~hgV~~g  140 (982)
                      +..+|||+|++|++|++.+. +.+++...||||++|+++  |. .|.++++..|. |.|+.  .+++||.+|..+|+..+
T Consensus        27 ~~~pNIi~I~~Dsl~~~~~~-~~~~~~~~TP~ld~La~~~~g~~~F~n~y~~~~~-~~~sra~~~llTG~~~~~~g~~~~  104 (424)
T 2w5q_A           27 AKKKNIIKIHLESFQTFLIN-KKVNGKEVTPFLNKLSSGKEQFTYFPNFFHQTGQ-GKTSDSEFTMDNSLYGLPQGSAFS  104 (424)
T ss_dssp             TTTCCEEEEEETTCCGGGTT-CEETTEESSHHHHHHHTTCSSCEEETTEECCCCT-TTHHHHHHHHHHSCCCCSSSCHHH
T ss_pred             CCCCeEEEEEECCCchhhcc-CccCCCcCCCcHHHHHhCCCceeccCcccccCCC-CCcchhHHHHHhcCCCCCCCceee
Confidence            44579999999999999874 222233469999999999  88 88999998886 45555  45899999999997532


Q ss_pred             -C-CCCCCChhhHHhhc-CCc-cccc--CCcchh---ccccCCCCCcccc---CCCCCcccccccccCChhHHHHHHHHH
Q 002011          141 -W-KANPVEFDSVFNQS-RHT-ISFG--SPDIVP---IFCGALPHSTWNS---YPHDFEDFATDASFLDEWSFDQFQSLL  208 (982)
Q Consensus       141 -~-~~npv~~Dsvfn~s-~~~-~~~G--s~~i~~---lf~~~~~~~~~~~---Y~~~~edf~~d~~~lD~~v~~~~~~~l  208 (982)
                       . ..+...+..++++. ++. ..++  ......   .+.. .+-+.+..   |+.. +.........|..+++++.+++
T Consensus       105 ~~~~~~~~tl~~~Lk~~~GY~T~~~h~~~~~~~~~~~~~~~-~Gfd~~~~~~~~~~~-~~~~~~~g~~d~~~~~~a~~~l  182 (424)
T 2w5q_A          105 LKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKH-FGIDKFYDATYYDMS-DKNVVNLGLKDKIFFKDSANYQ  182 (424)
T ss_dssp             HSTTSCCCCHHHHHHHHHCCEEEEEESSCTTGGGHHHHHHH-HTCCEEECGGGSCCC-GGGEETTEECHHHHHHHHHHHH
T ss_pred             ecCCchhhHHHHHHhhCCCCcEEEEECCCccccChhhhhhc-CCCceEechhhcCCC-ccccCCCCCChHHHHHHHHHHH
Confidence             1 22334678888888 762 2221  111100   0000 00111110   1100 0000111134667788888887


Q ss_pred             hhcCCChhHHHhhccCCeEEEEeccCCCCCCCCC------------CCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCE
Q 002011          209 NRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAH------------RPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRT  276 (982)
Q Consensus       209 ~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~~------------gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~T  276 (982)
                      ++           .++|.++++++.+.+..-+..            +.....|.+.++++|++||++++.+++.+..|||
T Consensus       183 ~~-----------~~~Pffl~~~~~~~H~P~~~p~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~Lk~~g~~dnT  251 (424)
T 2w5q_A          183 AK-----------MKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNS  251 (424)
T ss_dssp             HT-----------SCSSEEEEEECCSSCTTCCCCGGGCCSCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTS
T ss_pred             Hh-----------cCCCeEEEeeCCCCcCCCCCChhhccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCe
Confidence            53           245788888886654322110            1123469999999999999999999999999999


Q ss_pred             EEEEEcCCCCCCCCCC--------C-CCCCC--C--ceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCC
Q 002011          277 AYIFTADHGMSDKGSH--------G-DGHPT--N--TDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEW  343 (982)
Q Consensus       277 liI~TSDHGm~~~G~H--------G-~~s~~--e--t~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w  343 (982)
                      +||||||||... +.|        | +.+..  .  +++|+++|+|| .+++.                           
T Consensus       252 iIVf~sDHG~~~-~~~~~~~~~~~g~k~~~~e~~~~~rVPlii~~Pg-~~g~~---------------------------  302 (424)
T 2w5q_A          252 VIMIYGDHYGIS-ENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPG-KSGGI---------------------------  302 (424)
T ss_dssp             EEEEEECSCSSC-GGGHHHHHHHHTSCCCHHHHHHTTBCCEEEECTT-CCCEE---------------------------
T ss_pred             EEEEECCCCccc-ccchhhhhhhhCCCCCccccccccceeEEEEeCC-CCCce---------------------------
Confidence            999999999632 333        2 23322  2  79999999998 33321                           


Q ss_pred             CCCCccccccccccHHHHHHHhhCCCCCCC-CCCCCcHHh
Q 002011          344 GLNGIERVDVNQADIAPLMSTLLGLPCPVN-SVGNLPLEY  382 (982)
Q Consensus       344 ~l~~~~~~~v~qiDIaPTis~LlGlpiP~n-s~G~l~~~~  382 (982)
                           ....++++||+||+++++|++.|.. ..|+++.+.
T Consensus       303 -----~~~~~s~~Di~PTll~l~Gi~~~~~~~~G~sLl~~  337 (424)
T 2w5q_A          303 -----NNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSK  337 (424)
T ss_dssp             -----CCCCEEGGGHHHHHHHHHTCCCTTSCCSCCCTTST
T ss_pred             -----ecccchHHHHHHHHHHHcCCCCCcccccCccccCC
Confidence                 1357899999999999999999965 469987664


No 17 
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=99.84  E-value=1.5e-21  Score=222.75  Aligned_cols=251  Identities=15%  Similarity=0.116  Sum_probs=158.3

Q ss_pred             CCCCeEEEEEECCCCccccc-CCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCC-C
Q 002011           66 APAKRLVLFVADGLRADKFY-EPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWK-A  143 (982)
Q Consensus        66 ppa~rVVlIviDGLRaD~l~-~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~-~  143 (982)
                      +..+|||+|++|++|++.+. .+.++.  .||||++|+++|.+|.++++.+.|.|.|+++||+||.||..+|+..+-. .
T Consensus        32 ~~~PNIi~I~~Dd~g~~~l~~~~~g~~--~TPniD~LA~~G~~ft~~y~~~v~~C~PsRasllTG~~~~~~~~~~~~~~~  109 (375)
T 2w5v_A           32 KTPKNVILLISDGAGLSQISSTFYFKS--GTPNYTQFKNIGLIKTSSSREDVTDSASGATAFSCGIKTYNAAIGVADDST  109 (375)
T ss_dssp             CCCSEEEEEEETTCCHHHHHHHHHHSS--SCCGGGGCCEEEEEECCCSSCSSCCHHHHHHHHHHSSCCCTTCBSBCTTSC
T ss_pred             CCCCeEEEEEeCCCCHHHHHHHHhccC--CCCCHHHHHHhhheeccccCCCCcccHHHHHHHHhCCCCCCCeeeeCCCCC
Confidence            45679999999999998772 121222  5999999999999999999854455999999999999999999753321 2


Q ss_pred             CCCChhhHHhhcCC------cccccCCcchhcc---c------------cCCCCCccc---------------------c
Q 002011          144 NPVEFDSVFNQSRH------TISFGSPDIVPIF---C------------GALPHSTWN---------------------S  181 (982)
Q Consensus       144 npv~~Dsvfn~s~~------~~~~Gs~~i~~lf---~------------~~~~~~~~~---------------------~  181 (982)
                      +...+..++++.++      +|+.+..+-...+   .            .....+.+.                     .
T Consensus       110 ~~~tl~e~lk~~GY~T~~vGKwhl~~~~p~~~~~~~p~r~~~~~i~~~~~~~gfd~~~g~~~~~~~~~~~~~~~~~~~~~  189 (375)
T 2w5v_A          110 AVKSIVEIAALNNIKTGVVATSSITDATPASFYAHALNRGLEEEIAMDMTESDLDFFAGGGLNYFTKRKDKKDVLAILKG  189 (375)
T ss_dssp             BCCCHHHHHHHTTCEEEEEEEEETTSHHHHTTTCCBSCTTCHHHHHHHHTTSCCCEEEEECTHHHHSCTTCCCHHHHHHH
T ss_pred             ccCCHHHHHHHCCCeEEEEeCCCCCCCChhhhhhcCCCcccHHHHHHHhhccCCCEEEeCCccccccccCcccHHHHHHh
Confidence            23467788888876      3555421100000   0            000000000                     0


Q ss_pred             ----C-CCCCccc------------cccc--ccCC-------hhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCC
Q 002011          182 ----Y-PHDFEDF------------ATDA--SFLD-------EWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGC  235 (982)
Q Consensus       182 ----Y-~~~~edf------------~~d~--~~lD-------~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllgl  235 (982)
                          + ....+++            ..+.  ...+       ...++++.+++++           ++++.++++....+
T Consensus       190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~i~~-----------~~kpFfl~~~~~~~  258 (375)
T 2w5v_A          190 NQFTINTTALTDFSSIASNRKMGFLLADEAMPTMEKGRGNFLSAATDLAIQFLSK-----------DNSAFFIMSEGSQI  258 (375)
T ss_dssp             TTEEEECSCCCCGGGTTTCSEEEEECSSSSCCCTTTTCTTHHHHHHHHHHHHHTG-----------GGCCEEEEEEETTH
T ss_pred             CCCeeeecCHHHHhhccCCCceeEeccccCCcccccccccHHHHHHHHHHHHhhh-----------CCCceEEEeecCcC
Confidence                0 0000000            0000  0000       0123333344321           23466666665567


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCC--CCCCCCCCC-------------C-----C
Q 002011          236 DSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADH--GMSDKGSHG-------------D-----G  295 (982)
Q Consensus       236 D~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDH--Gm~~~G~HG-------------~-----~  295 (982)
                      |..+|..  ....|.+.++++|++||++++.+++.+   ||+|||||||  |....|.|+             .     .
T Consensus       259 d~~~h~~--~~~~~~~~v~~~D~~vG~il~~L~~~g---nTlviftsDhG~Gg~~~g~~~~~~~~~~~~~~~~K~~~~~~  333 (375)
T 2w5v_A          259 DWGGHAN--NASYLISEINDFDDAIGTALAFAKKDG---NTLVIVTSDHETGGFTLAAKKNKREDGSEYSDYTEIGPTFS  333 (375)
T ss_dssp             HHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHS---SEEEEEECSCEETTCBCBEEEEECSSSCEEEEEEEECCBCS
T ss_pred             ChhhcCc--cHHHHHHHHHHHHHHHHHHHHHHhhCC---CEEEEEECcCCCCCcccCCCCcccccCcccccCCccccCcC
Confidence            8877743  345569999999999999999999876   9999999999  322234442             1     2


Q ss_pred             --CCCCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCC
Q 002011          296 --HPTNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLP  369 (982)
Q Consensus       296 --s~~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlp  369 (982)
                        ..+.+++|++++|||..   .                                ....++++||+|||++++|++
T Consensus       334 ~~~e~g~rVP~iv~~Pg~~---~--------------------------------~~~~v~~~Di~pTll~~agi~  374 (375)
T 2w5v_A          334 TGGHSATLIPVFAYGPGSE---E--------------------------------FIGIYENNEIFHKILKVTKWN  374 (375)
T ss_dssp             CSSEECCCEEEEEESTTGG---G--------------------------------GCEEEETTHHHHHHHHHHCCC
T ss_pred             CCCCCCcEeEEEEECCCcc---c--------------------------------cCCceehhHHHHHHHHHhCCC
Confidence              23568999999999731   0                                124678999999999999986


No 18 
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=99.80  E-value=1.3e-20  Score=217.11  Aligned_cols=203  Identities=16%  Similarity=0.167  Sum_probs=133.5

Q ss_pred             CCCCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCCCC
Q 002011           65 DAPAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWKAN  144 (982)
Q Consensus        65 ~ppa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~~n  144 (982)
                      .+|.+|||+|++||+|+|.+....  ....+|||++|+++|..+ ..++..||+|.|+|+||+||.+|..||+..|...+
T Consensus        12 ~~~~~~vv~i~~Dgl~~~~l~~~~--~~~~tP~l~~L~~~G~~~-~~~~~~Pt~t~p~~~sl~TG~~P~~hGi~~n~~~~   88 (406)
T 1ei6_A           12 RLSSAPTIVICVDGCEQEYINQAI--QAGQAPFLAELTGFGTVL-TGDCVVPSFTNPNNLSIVTGAPPSVHGICGNFFFD   88 (406)
T ss_dssp             ECCSSCEEEEECTTCCHHHHHHHH--HTTSCHHHHHGGGTSEEE-EEECCSSCCHHHHHHHHHHTSCHHHHCCCSSEEEE
T ss_pred             cCCCCCEEEEEeCCCCHHHHHHHH--hccCCcHHHHHHhCCCcc-cccccCCCcccccceeeeecCCcccCCccccceec
Confidence            456789999999999999985311  123599999999997766 68889999999999999999999999998763211


Q ss_pred             C-------------CChhhHHhhc---CC-cccccCCcchh-ccccCCCCCccc-c-CCCCCc----cc-----------
Q 002011          145 P-------------VEFDSVFNQS---RH-TISFGSPDIVP-IFCGALPHSTWN-S-YPHDFE----DF-----------  189 (982)
Q Consensus       145 p-------------v~~Dsvfn~s---~~-~~~~Gs~~i~~-lf~~~~~~~~~~-~-Y~~~~e----df-----------  189 (982)
                      +             ...++++++.   ++ +...+.++... ..+.+. +..+. . ++....    ..           
T Consensus        89 ~~~~~~~~~~~~~~~~~~ti~~~l~~~G~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (406)
T 1ei6_A           89 QETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQL-KGICFSAEKADQVNLEEHGVENILARVGMPV  167 (406)
T ss_dssp             TTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTC-CSEEEESTTCSSCCHHHHSCCCHHHHHTCCC
T ss_pred             cccCeEEEecCcccccCCCHHHHHHHcCCeEEEEccccccCcCccccC-CcccccCCccccccccccchhHHHHHhCCCC
Confidence            1             1234454443   22 22222222111 111110 00000 0 000000    00           


Q ss_pred             -ccccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 002011          190 -ATDASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLE  268 (982)
Q Consensus       190 -~~d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~  268 (982)
                       .......|+++.+.+.++++            +++|++  +|+.++|+.||.+||.|++|.++++++|+.|+++++.  
T Consensus       168 ~~~~~~~~~~~~~~~a~~~i~------------~~~p~f--ly~~~~D~~gH~~g~~s~~~~~~l~~lD~~lg~ll~~--  231 (406)
T 1ei6_A          168 PSVYSADLSEFVFAAGLSLLT------------NERPDF--MYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQ--  231 (406)
T ss_dssp             CCSSSTHHHHHHHHHHHHHHH------------TTCCSE--EEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHT--
T ss_pred             ccccchhHHHHHHHHHHHHHh------------cCCCeE--EEeCCcchhhccCCCCcHHHHHHHHHHHHHHHHHHhC--
Confidence             00011234455555555543            345776  6778999999999999999999999999999999986  


Q ss_pred             hccCCCCEEEEEEcCCCCCCCCCCC
Q 002011          269 DYFKDNRTAYIFTADHGMSDKGSHG  293 (982)
Q Consensus       269 ~~~~~~~TliI~TSDHGm~~~G~HG  293 (982)
                            +|++|+||||||.+.+.|+
T Consensus       232 ------~t~vivtSDHG~~~~~~~~  250 (406)
T 1ei6_A          232 ------GAIVAITADHGMNAKTDAI  250 (406)
T ss_dssp             ------TCEEEEECSCCCEECBCTT
T ss_pred             ------CCEEEEEeCCCCccCCCcc
Confidence                  8999999999998776554


No 19 
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=99.76  E-value=1.1e-19  Score=210.34  Aligned_cols=201  Identities=16%  Similarity=0.196  Sum_probs=130.3

Q ss_pred             CCCCCeEEEEEECCCCcccccCCCCCCCCCChHHHHHHHcCcccceeeeCCCCCCchhhHHHhhCCCCCCcccccCCCCC
Q 002011           65 DAPAKRLVLFVADGLRADKFYEPDSEGNYRAPFLRSVIQNQGCWGVSHARPPTESRPGHVAIIAGFYEDPSAVTKGWKAN  144 (982)
Q Consensus        65 ~ppa~rVVlIviDGLRaD~l~~~~~~~~~~~P~L~~L~~~gg~~~~s~t~~PT~T~P~~~SL~TG~yP~~hgV~~g~~~n  144 (982)
                      ..|++|||+|++||+|+|.+... . ....||||++++++|..+ ..++..|++|.|+|+||+||.||..|||..|...+
T Consensus        20 ~~p~~~vvvI~iDgl~~~~l~~~-~-~~~~tP~L~~La~~G~~~-~~~~~~Ps~T~ps~asl~TG~~P~~HGI~~n~~~d   96 (427)
T 3szy_A           20 PWPRVPAIAVCLDGCEPAYLDAA-I-DAGLMPALKRIKERGAVR-LAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYE   96 (427)
T ss_dssp             ECCSSCEEEEECTTCCHHHHHHH-H-HTTCCHHHHHHHHHSEEE-EEECCSSBCHHHHHHHHHHTSCHHHHCCCSSEEEE
T ss_pred             cCCCCCEEEEEECCCCHHHHHhh-h-hccCChHHHHHHHcCCcc-eeeecCCCCcHhhHHHHHhCCCcccCCcccceeec
Confidence            44689999999999999998531 1 123599999999997776 78889999999999999999999999998763211


Q ss_pred             C-------------CChhhHHhhc---CC-cccccCCcch-hccccCCC--CCccccCCCCC-----------cc----c
Q 002011          145 P-------------VEFDSVFNQS---RH-TISFGSPDIV-PIFCGALP--HSTWNSYPHDF-----------ED----F  189 (982)
Q Consensus       145 p-------------v~~Dsvfn~s---~~-~~~~Gs~~i~-~lf~~~~~--~~~~~~Y~~~~-----------ed----f  189 (982)
                      |             ...+++++..   ++ +...+.++.. ...+.+..  ......|....           ++    +
T Consensus        97 ~~~~~~~~~~~~~~~~~~ti~~~l~~~G~~ta~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~  176 (427)
T 3szy_A           97 PSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWL  176 (427)
T ss_dssp             TTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCCSSSCEEEEESTTGGGCCHHHHSSSCHHHHH
T ss_pred             cccCcceeccccccCCCCcHHHHHHHcCCEEEEEecCccchhccCccccccCCCCceecccccccccchhhhHHHHHHHh
Confidence            1             1233444433   22 1111111100 00110000  00000011000           00    0


Q ss_pred             cc-----ccccCChhHHHHHHHHHhhcCCChhHHHhhccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 002011          190 AT-----DASFLDEWSFDQFQSLLNRSNEDPKLRKLLLQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMY  264 (982)
Q Consensus       190 ~~-----d~~~lD~~v~~~~~~~l~~~~~~~~L~~~~~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il  264 (982)
                      ..     .....|+|+++.+.+.++            +.+|++++  +.++|+.||.+||+|+++.++++++|+.|++++
T Consensus       177 g~~~~~~~~~~~d~~~~~~a~~~~~------------~~~p~l~y--~~~~D~~gH~~G~~s~~~~~~~~~~D~~l~~l~  242 (427)
T 3szy_A          177 GRPVPEVYSAALSEFVFAAGVKLLR------------EFRPDIMY--LTTTDYVQHKYAPGVPEANSFYEMFDRYLAELD  242 (427)
T ss_dssp             TCCCCCSSSSHHHHHHHHHHHHHHH------------HTCCSEEE--EECCCHHHHHCCTTSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccccchhHHHHHHHHHHHH------------hcCCCEEE--EcccchhhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence            00     011245566555555443            45688755  568999999999999999999999999999998


Q ss_pred             HHHHhccCCCCEEEEEEcCCCCCCCC
Q 002011          265 FLLEDYFKDNRTAYIFTADHGMSDKG  290 (982)
Q Consensus       265 ~~l~~~~~~~~TliI~TSDHGm~~~G  290 (982)
                      +.        +|.+|+||||||.+.+
T Consensus       243 ~~--------~~~vivtsDHGm~~~~  260 (427)
T 3szy_A          243 GL--------GAAIVVTADHGMKPKH  260 (427)
T ss_dssp             HT--------TCEEEEECSCCCEECB
T ss_pred             hC--------CCEEEEEcCCCccccC
Confidence            74        6899999999997653


No 20 
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=99.75  E-value=2.4e-19  Score=203.71  Aligned_cols=117  Identities=21%  Similarity=0.266  Sum_probs=88.7

Q ss_pred             CCeEEEEeccCCCC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCCCCCCCCcee
Q 002011          224 DKLVIFLHLLGCDS-NGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHGDGHPTNTDT  302 (982)
Q Consensus       224 d~~v~flhllglD~-~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG~~s~~et~t  302 (982)
                      ++++...+....|. .||.  ...+.|.++|+++|++||++++.|+     |||+||||||||. +.|.||..+.. .+|
T Consensus       288 ~~~~~~~~~~~~d~~~~~~--~~~~~y~~~i~~~D~~vg~~l~~L~-----entliiftsDnG~-~~~~~~~~~~~-~~v  358 (413)
T 3m7v_A          288 TKGFSFTNLVDFDALYGHR--RNAHGYRDCLHEFDERLPEIIAAMK-----VDDLLLITADHGN-DPTYAGTDHTR-EYV  358 (413)
T ss_dssp             CSEEEEEEECHHHHHTTTT--TCHHHHHHHHHHHHHHHHHHHHTCC-----TTEEEEEECSSBC-CTTSSSSSCBC-BCE
T ss_pred             ccccceecccccchhhhcc--hhHHHHHHHHHHHHhHHHHHHHhcC-----CCCEEEEEccCCC-CCCCCCCCCCC-eeE
Confidence            45555666555543 4554  3568899999999999999999884     7999999999996 34555554433 489


Q ss_pred             eEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCCCCCCCcHHh
Q 002011          303 PLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVNSVGNLPLEY  382 (982)
Q Consensus       303 Pli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~ns~G~l~~~~  382 (982)
                      |+|+++||++.. .                                ....++++||+||+++++|++.|.  .|+++++.
T Consensus       359 p~~~~~p~~~~~-~--------------------------------~~~~~~~~d~~pt~~~~~g~~~p~--~g~s~~~~  403 (413)
T 3m7v_A          359 PLLAYSPSFTGN-G--------------------------------VLPVGHYADISATIADNFGVDTAM--IGESFLDK  403 (413)
T ss_dssp             EEEEECTTCSCC-E--------------------------------ECCCEETTHHHHHHHHHHTCCCCS--SCCCCHHH
T ss_pred             EEEEEECCCCCC-C--------------------------------cCCCcEEehHHHHHHHHcCCCcCC--CChhHHHH
Confidence            999999986421 1                                124568899999999999999996  69998885


Q ss_pred             hC
Q 002011          383 IN  384 (982)
Q Consensus       383 l~  384 (982)
                      |-
T Consensus       404 l~  405 (413)
T 3m7v_A          404 LI  405 (413)
T ss_dssp             HC
T ss_pred             Hh
Confidence            53


No 21 
>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A
Probab=99.53  E-value=1.9e-14  Score=162.73  Aligned_cols=120  Identities=21%  Similarity=0.300  Sum_probs=95.1

Q ss_pred             ccCCeEEEEeccCCCC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCCCCCCCCc
Q 002011          222 LQDKLVIFLHLLGCDS-NGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHGDGHPTNT  300 (982)
Q Consensus       222 ~~d~~v~flhllglD~-~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG~~s~~et  300 (982)
                      +.+++++|+|+.++|. .||..+  .++|.++++++|++|+++++.+++     +.++|+|||||+.. + +++......
T Consensus       277 ~~~~dfv~vn~~~~D~~~GH~~~--~~~Y~~aIe~vD~~IGrIL~~L~e-----~~lVIiTSDHG~dp-~-~~~t~ht~~  347 (399)
T 3ot9_A          277 MDFTGLSFLNLVDFDALFGHRRD--PQGYGEALQEYDARLPEVFAKLKE-----DDLLLITADHGNDP-I-HPGTDHTRE  347 (399)
T ss_dssp             SCCSEEEEEEECHHHHHTTTTTC--HHHHHHHHHHHHTTHHHHHHHCCT-----TEEEEEECSSBCCS-S-SSSSSCBCB
T ss_pred             hCCCCEEEEEecCCcccccccCC--HHHHHHHHHHHHHHHHHHHHHhhc-----CCeEEEEcCCCCCC-C-CCCcCCCCC
Confidence            4468999999999999 999864  589999999999999999999964     34999999999842 2 222222234


Q ss_pred             eeeEEEeCCCcCCCC-CCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCCCCCCCc
Q 002011          301 DTPLVVWGAGVQHPK-PISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVNSVGNLP  379 (982)
Q Consensus       301 ~tPli~~g~Gv~~p~-~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~ns~G~l~  379 (982)
                      ++|++++|||++.+. ..                                ...++++||+||+++++|++.|.  .|+++
T Consensus       348 ~VPlIi~~Pgi~~g~~~~--------------------------------~~~~sl~DIaPTil~llGi~~P~--~G~SL  393 (399)
T 3ot9_A          348 YVPLLAYSPSMKEGGQEL--------------------------------PLRQTFADIGATVAENFGVKMPE--YGTSF  393 (399)
T ss_dssp             CEEEEEECTTCTTCCCBC--------------------------------CCBSSTHHHHHHHHHHHTCCCCS--SCCCC
T ss_pred             eEeEEEEECCCCCCceeE--------------------------------CCCCEEecHHHHHHHHhCcCCCC--CCccH
Confidence            899999999864321 11                                23468999999999999999998  99999


Q ss_pred             HHhhC
Q 002011          380 LEYIN  384 (982)
Q Consensus       380 ~~~l~  384 (982)
                      .+.|.
T Consensus       394 l~~L~  398 (399)
T 3ot9_A          394 LNELK  398 (399)
T ss_dssp             GGGC-
T ss_pred             HHHhc
Confidence            88763


No 22 
>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A
Probab=99.50  E-value=5.1e-14  Score=158.91  Aligned_cols=117  Identities=20%  Similarity=0.280  Sum_probs=93.4

Q ss_pred             cCC-eEEEEeccCCCC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCCCCCCCCc
Q 002011          223 QDK-LVIFLHLLGCDS-NGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHGDGHPTNT  300 (982)
Q Consensus       223 ~d~-~v~flhllglD~-~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG~~s~~et  300 (982)
                      .+. +++|+|+.+.|. .||..  +.++|.++++.+|++|+++++.++     ++|++|+|||||... +.++..|.. .
T Consensus       284 ~~~~dfi~vn~~~~Dm~~GH~~--d~~~y~~aIe~vD~~LG~Il~aL~-----~~tllIITADHGndp-~~~~t~HT~-~  354 (403)
T 2i09_A          284 AFTKGFSFTNLVDFDALYGHRR--NAHGYRDCLHEFDERLPEIIAAMK-----VDDLLLITADHGNDP-TYAGTDHTR-E  354 (403)
T ss_dssp             SCCSEEEEEEECHHHHHTTTTT--CHHHHHHHHHHHHHHHHHHHHTCC-----TTEEEEEECSSBCCT-TSSSSSCBC-B
T ss_pred             CCCCCEEEEEeccCCcccCcCC--CHHHHHHHHHHHHHHHHHHHHhhC-----CCCEEEEecCCCCCC-CCCCcCCCC-C
Confidence            345 899999999996 99986  458999999999999999999985     589999999999843 333333322 4


Q ss_pred             eeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCCCCCCCcH
Q 002011          301 DTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVNSVGNLPL  380 (982)
Q Consensus       301 ~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~ns~G~l~~  380 (982)
                      ++|++++|||++++...                                .... ++||+||+++++|++.|.  .|+++.
T Consensus       355 ~VPlIi~gpg~~~g~~l--------------------------------~~~~-l~DIaPTIldllGl~~P~--~G~Sll  399 (403)
T 2i09_A          355 YVPLLAYSPSFTGNGVL--------------------------------PVGH-YADISATIADNFGVDTAM--IGESFL  399 (403)
T ss_dssp             CEEEEEECTTCSCCEEC--------------------------------CCEE-TTHHHHHHHHHTTCCCCS--SCCCCH
T ss_pred             ceeEEEEECCCCCCcCc--------------------------------CCCE-EeeHHHHHHHHcCcCCCC--CCCcHH
Confidence            89999999986533211                                1124 899999999999999998  899988


Q ss_pred             Hhh
Q 002011          381 EYI  383 (982)
Q Consensus       381 ~~l  383 (982)
                      +.|
T Consensus       400 ~~L  402 (403)
T 2i09_A          400 DKL  402 (403)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            765


No 23 
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=99.49  E-value=4.9e-14  Score=164.03  Aligned_cols=123  Identities=23%  Similarity=0.296  Sum_probs=95.0

Q ss_pred             ccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCC-C---CCCCC--
Q 002011          222 LQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDK-G---SHGDG--  295 (982)
Q Consensus       222 ~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~-G---~HG~~--  295 (982)
                      +++++++++|+.++|.+||.  .+.++|.++++.+|++||++++.+++.    +|++|||||||..+. +   .||..  
T Consensus       411 ~~~~DfI~vn~an~DmvGHt--Gd~~a~~kAIE~vD~~LGrIl~aL~e~----GtiIIITADHGn~e~m~d~~~~G~plr  484 (561)
T 3igz_B          411 SGMYNVVRINFPNGDMVGHT--GDLKATITGVEAVDESLAKLKDAVDSV----NGVYIVTADHGNSDDMAQRDKKGKPMK  484 (561)
T ss_dssp             HSCCSEEEEEECHHHHHHTT--TCHHHHHHHHHHHHHHHHHHHHHHHHT----TCEEEEECSSBSTTCCBCBCTTCCBCB
T ss_pred             hCCCCEEEEecCChhhhhcC--CCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEEEcCCCCchhcccccccCCccc
Confidence            45689999999999999996  367899999999999999999999874    499999999997532 2   24321  


Q ss_pred             --------CC--CCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHh
Q 002011          296 --------HP--TNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTL  365 (982)
Q Consensus       296 --------s~--~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~L  365 (982)
                              ..  ...++|++++|||+.++....                 +            ....++.+|||||++++
T Consensus       485 g~KG~~~e~t~HT~~~VPlII~gPg~~~g~~l~-----------------~------------~l~~~sL~DIAPTILdL  535 (561)
T 3igz_B          485 DGNGNVLPLTSHTLSPVPVFIGGAGLDPRVAMR-----------------T------------DLPAAGLANVTATFINL  535 (561)
T ss_dssp             CTTSCBCBCCSCBCCCEEEEEECTTSCTTEEEC-----------------S------------SCTTCBTHHHHHHHHHH
T ss_pred             cccccccccccccCceecEEEEcCCCCCCceec-----------------c------------ccCceeehHHHHHHHHH
Confidence                    11  235799999999864321100                 0            00235789999999999


Q ss_pred             hCCCCCCCCCCCCc
Q 002011          366 LGLPCPVNSVGNLP  379 (982)
Q Consensus       366 lGlpiP~ns~G~l~  379 (982)
                      +|++.|.+..|+++
T Consensus       536 ~Gl~~P~em~G~~~  549 (561)
T 3igz_B          536 LGFEAPEDYEPSLI  549 (561)
T ss_dssp             HTBCCCTTSCCCSE
T ss_pred             hCCCCCcCcCCccc
Confidence            99999999999865


No 24 
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=99.40  E-value=4.7e-13  Score=156.21  Aligned_cols=116  Identities=28%  Similarity=0.340  Sum_probs=94.5

Q ss_pred             cCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCC--CCCCCCCC--C
Q 002011          223 QDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDK--GSHGDGHP--T  298 (982)
Q Consensus       223 ~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~--G~HG~~s~--~  298 (982)
                      ++++++++|+..+|..||..  ..++|.++++++|++|+++++.+++.    +|++|+|||||+.+.  +.||..+.  .
T Consensus       390 ~kpdfi~lnf~~pD~~GH~~--~~~~y~~aIe~vD~~lGrll~~Lk~~----gTlIIiTSDHG~~e~m~d~~Gk~~t~ht  463 (511)
T 1o98_A          390 DKYDAIILNYANPDMVGHSG--KLEPTIKAVEAVDECLGKVVDAILAK----GGIAIITADHGNADEVLTPDGKPQTAHT  463 (511)
T ss_dssp             TCCSEEEEEECHHHHHHTTT--CHHHHHHHHHHHHHHHHHHHHHHHHT----TCEEEEECSSBSTTCCBCTTSCBCCSCB
T ss_pred             cCCcEEEEeCCCCccccccc--CHHHHHHHHHHHHHHHHHHHHHHHHC----CCEEEEECCCCccccccCCCCCcccCCC
Confidence            45899999999999999975  57899999999999999999999875    499999999998431  23443332  3


Q ss_pred             CceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCCCCCCCCCCC
Q 002011          299 NTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLPCPVNSVGNL  378 (982)
Q Consensus       299 et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlpiP~ns~G~l  378 (982)
                      ..++|++++|||++ .                                   +...+++||+||+++++|++.|....|++
T Consensus       464 ~~~VPlIi~~pgi~-~-----------------------------------~~~~sl~DIaPTIL~llGi~~P~~mdG~S  507 (511)
T 1o98_A          464 TNPVPVIVTKKGIK-L-----------------------------------RDGGILGDLAPTMLDLLGLPQPKEMTGKS  507 (511)
T ss_dssp             CCCEEEEECCTTCC-B-----------------------------------CSSEEGGGHHHHHHHHHTCCCCTTCCCCC
T ss_pred             CeEEEEEEEECCcc-c-----------------------------------CCCeEeHHHHHHHHHHhCcCCCCCCCCcc
Confidence            46899999998842 1                                   11367999999999999999999999987


Q ss_pred             cH
Q 002011          379 PL  380 (982)
Q Consensus       379 ~~  380 (982)
                      +.
T Consensus       508 Ll  509 (511)
T 1o98_A          508 LI  509 (511)
T ss_dssp             SB
T ss_pred             cc
Confidence            64


No 25 
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=98.92  E-value=1e-09  Score=126.23  Aligned_cols=113  Identities=19%  Similarity=0.242  Sum_probs=85.1

Q ss_pred             CCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCCCCCCCCceee
Q 002011          224 DKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHGDGHPTNTDTP  303 (982)
Q Consensus       224 d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG~~s~~et~tP  303 (982)
                      +++++++|+.++|..||..  +.++|.++++.+|+.++++++.+++.    +|++|+|||||+.  ..|++.  ....+|
T Consensus       293 ~~d~v~v~~~~~D~~GH~~--d~~~~~~aie~~D~~lg~ll~al~~~----~~~liitaDHG~p--~~~~~H--t~~~VP  362 (412)
T 2zkt_A          293 DYDFVFLHFKPTDAAGHDN--KPKLKAELIERADRMIGYILDHVDLE----EVVIAITGDHSTP--CEVMNH--SGDPVP  362 (412)
T ss_dssp             HCSEEEEEECHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHTTSCTT----TEEEEEECSSBCC--TTTTSC--BCCCEE
T ss_pred             CCCEEEEcCccCChHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEEECCCCCC--CCCCcC--CCCcee
Confidence            4799999999999999996  67899999999999999999999653    5999999999973  334332  234899


Q ss_pred             EEEeCCCcCCCCCCCCCCCCCCCcccc--cCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCC
Q 002011          304 LVVWGAGVQHPKPISETNHSDCGFLFI--DEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLP  369 (982)
Q Consensus       304 li~~g~Gv~~p~~~~~~~~~~~~~f~~--~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlp  369 (982)
                      ++++|+|+++...         ..|+.  ...+              ....+++.||+||+++++|++
T Consensus       363 ~ii~g~~~~~~~~---------~~f~E~~~~~g--------------~l~~i~~~Di~pTil~llg~~  407 (412)
T 2zkt_A          363 LLIAGGGVRTDDT---------KRFGEREAMKG--------------GLGRIRGHDIVPIMMDLMNRS  407 (412)
T ss_dssp             EEEESTTCCCCSC---------CSCSHHHHTTC--------------TTEEEEGGGHHHHHHHHTTCC
T ss_pred             EEEEeCCcCCCcc---------cccccccccCc--------------ccccccHHHHHHHHHHHhCCC
Confidence            9999998653211         00100  0000              112578899999999999997


No 26 
>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}
Probab=98.70  E-value=7.6e-08  Score=109.90  Aligned_cols=60  Identities=15%  Similarity=0.168  Sum_probs=52.0

Q ss_pred             ccCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCC
Q 002011          222 LQDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGM  286 (982)
Q Consensus       222 ~~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm  286 (982)
                      +++..++++-...+|+.||...+  ..+...+.++|+.|+..++.+++   ++||++|+|||||.
T Consensus       213 n~~GFFLmVEgg~ID~a~H~nd~--~~al~e~~~fD~AV~~al~~~~~---~~dTLIIVTADH~~  272 (400)
T 3a52_A          213 NEKGFVLLVEGSLIDWAGHNNDI--ATAMAEMQGFANAIEVVEQYIRQ---HPDTLLVVTADHNT  272 (400)
T ss_dssp             CTTCEEEEEEETHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHH---CCSEEEEEECSCEE
T ss_pred             CCCCeEEEecCccCchhhhhCcH--HHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeccCCC
Confidence            34567888888889999998654  68999999999999999999987   36899999999985


No 27 
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=98.23  E-value=1.6e-06  Score=98.61  Aligned_cols=78  Identities=15%  Similarity=0.297  Sum_probs=53.1

Q ss_pred             CCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCC-CCCCCCCCCCCCcee
Q 002011          224 DKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMS-DKGSHGDGHPTNTDT  302 (982)
Q Consensus       224 d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~-~~G~HG~~s~~et~t  302 (982)
                      +.+++|+|+.+.|.+||..  +-++|.++|+.+|+.++++++ ++     +++++++|||||-. ..+.|..    | .+
T Consensus       290 ~~d~v~~n~~~~D~~GH~g--d~~~~~~aie~~D~~l~~i~~-l~-----~~~~liITaDHg~p~~~~~HT~----~-pV  356 (399)
T 3kd8_A          290 SHDFVLVNIKATDVAGHDG--NYPLKRDVIEDIDRAMEPLKS-IG-----DHAVICVTGDHSTPCSFKDHSG----D-PV  356 (399)
T ss_dssp             TCSEEEEEEECC------C--CHHHHHHHHHHHHHTTGGGGS-CT-----TTEEEEEEEC-----------C----C-CE
T ss_pred             hCCEEEEEecCcchhhhcc--CHHHHHHHHHHHHHHHHHHHc-cC-----CCCEEEEECCCCCCCCCCCCCC----C-Cc
Confidence            4789999999999999985  568999999999999999998 74     57899999999962 2333322    1 39


Q ss_pred             eEEEeCCCcCCC
Q 002011          303 PLVVWGAGVQHP  314 (982)
Q Consensus       303 Pli~~g~Gv~~p  314 (982)
                      |++++|+++++.
T Consensus       357 P~ii~g~~~~~d  368 (399)
T 3kd8_A          357 PIVFYTDGVMND  368 (399)
T ss_dssp             EEEEEETTCCCC
T ss_pred             cEEEEcCCCCCC
Confidence            999999998643


No 28 
>1k7h_A Alkaline phosphatase; hydrolase, transferase, phosphomonoester, extended beta SHEE triad, metal triad; HET: NAG; 1.92A {Pandalus borealis} SCOP: c.76.1.1 PDB: 1shq_A* 1shn_A*
Probab=97.99  E-value=5.8e-06  Score=95.91  Aligned_cols=58  Identities=17%  Similarity=0.181  Sum_probs=50.5

Q ss_pred             cCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCC
Q 002011          223 QDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGM  286 (982)
Q Consensus       223 ~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm  286 (982)
                      .+..++|+-...+|+.||..  +-..|.+.+..+|+.|+.+++.++    +++|++|+|||||.
T Consensus       302 ~~GFfl~vE~~~iD~~gH~~--d~~~~~~e~~~fD~av~~~~~~~~----~~dtLlivTADHg~  359 (476)
T 1k7h_A          302 ENGFFLLVEGGRIDHMHHAN--QIRQSLAETLDMEEAVSMALSMTD----PEETIILVTADHGH  359 (476)
T ss_dssp             TTCEEEEEEECHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHSC----TTTEEEEEEESSEE
T ss_pred             CCceEEEecccccchhhccc--cHHHHHHHHHHHHHHHHHHHHhcC----CcCcEEEEecccCC
Confidence            44568889999999999985  457899999999999999999884    46999999999986


No 29 
>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*
Probab=97.91  E-value=1.3e-05  Score=93.13  Aligned_cols=56  Identities=21%  Similarity=0.199  Sum_probs=45.5

Q ss_pred             CeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCC
Q 002011          225 KLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGM  286 (982)
Q Consensus       225 ~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm  286 (982)
                      ..++++-...+|+.||..  +-..+.+.+.++|+.|+++++.++    +++|++|+|||||.
T Consensus       305 Gffl~veg~~iD~~gH~~--d~~~~~~~~~~fD~al~~~~~~~~----~~dtLliVTADH~~  360 (484)
T 1zed_A          305 GFFLFVEGGRIDHGHHES--RAYRALTETIMFDDAIERAGQLTS----EEDTLSLVTADHSH  360 (484)
T ss_dssp             CEEEEEEETTHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHSC----TTTEEEEEEESCEE
T ss_pred             cEEEEecccCcchhhhcC--CHHHHHHHHHHHHHHHHHHHHhcC----CCCcEEEEecccCc
Confidence            334555555899999986  457899999999999999998653    46999999999985


No 30 
>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...
Probab=97.84  E-value=3.3e-05  Score=88.62  Aligned_cols=59  Identities=19%  Similarity=0.221  Sum_probs=50.1

Q ss_pred             CCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCC
Q 002011          224 DKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMS  287 (982)
Q Consensus       224 d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~  287 (982)
                      +..+++++...+|+.||...  -..+...+.++|+.|+.+++.+++   ++||++|+|||||..
T Consensus       315 ~GfFl~VEg~~iD~a~H~nd--~~~~~~e~~~fD~av~~a~~~~~~---~~dTLiiVTADH~~~  373 (449)
T 3tg0_A          315 KGFFLQVEGASIDKQDHAAN--PCGQIGETVDLDEAVQRALEFAKK---EGNTLVIVTADHAHA  373 (449)
T ss_dssp             SCEEEEEEETHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHH---HSSEEEEEECSSBCS
T ss_pred             CcEEEEEeccccchhhccCC--HHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCCCc
Confidence            34578888888999999854  468999999999999999999975   368999999999953


No 31 
>2x98_A Alkaline phosphatase; hydrolase; 1.70A {Halobacterium salinarum}
Probab=96.28  E-value=0.0077  Score=69.26  Aligned_cols=56  Identities=20%  Similarity=0.226  Sum_probs=41.0

Q ss_pred             CeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCC
Q 002011          225 KLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHG  285 (982)
Q Consensus       225 ~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHG  285 (982)
                      ..++++==..+|+.+|...+  ....+ ....|+.+++.++..++.  .++|++|+||||+
T Consensus       250 GFFLmVEgg~ID~a~H~n~~--~~~~e-~~~~d~av~~a~~~~~~~--~~dTLIIVTADH~  305 (431)
T 2x98_A          250 GFFLLVESGRVDHAGHANYP--AQVAE-QYEATQVAGQLVEYAETT--AEPTFLVSTGDHE  305 (431)
T ss_dssp             CEEEEEEECSHHHHHHHTCT--THHHH-HHHHHHHHHHHHHHHHHC--SSCEEEEEEEEEE
T ss_pred             ceEEEEeccccchhhccChH--HHHHH-HHHHHHHHHHHHHHHhcC--CCCeEEEEeCcCC
Confidence            45566655679999997644  23333 346789999999888764  4679999999995


No 32 
>2w0y_A APH, alkaline phosphatase; hydrolase, halophilic; 1.7A {Halobacterium salinarum R1} PDB: 2x98_A
Probab=95.99  E-value=0.0038  Score=72.06  Aligned_cols=58  Identities=17%  Similarity=0.202  Sum_probs=49.7

Q ss_pred             CCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCC
Q 002011          224 DKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGM  286 (982)
Q Consensus       224 d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm  286 (982)
                      +..++++....+|+.||...+  ..+...+.++|+. +.+++.+++.  .++|++|+|||||.
T Consensus       292 ~GfFLmVEg~~iD~agH~nd~--~~~~~e~~~fD~a-~~a~~~~~~~--~~dTLiIVTADH~~  349 (473)
T 2w0y_A          292 KGFFLLVESGRVDHAGHANYP--AQVAEQYEATQVA-GQLVEYAETT--AEPTFLVSTGDHEC  349 (473)
T ss_dssp             CCEEEEEEECSHHHHHHHTCT--THHHHHHHHHHHH-HHHHHHHHHC--SSCEEEEEEEEEEE
T ss_pred             CCeEEEeeccccChhhccCCH--HHHHHHHHHHHHH-HHHHHHHhcC--CCCcEEEEeCcCCC
Confidence            345799999999999998654  6889999999999 9999998764  36799999999984


No 33 
>3e2d_A Alkaline phosphatase; cold-adaptation, metalloenzyme, dimer, psychrophilic bacteria, crystallography, hydrolase; 1.40A {Vibrio SP}
Probab=93.83  E-value=0.039  Score=64.22  Aligned_cols=58  Identities=24%  Similarity=0.334  Sum_probs=46.8

Q ss_pred             cCCeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCC
Q 002011          223 QDKLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHG  285 (982)
Q Consensus       223 ~d~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHG  285 (982)
                      ++..++++==..+|+.+|...  ...........|+.|+..++..++   ++||++|+||||+
T Consensus       260 ~~GFFLmVEgg~ID~a~H~nd--a~~al~E~~~fD~AV~~A~~~~~~---~~dTLIIVTADH~  317 (502)
T 3e2d_A          260 EDGFFLMVEGGQIDWAGHSND--AGTMLHELLKFDEAIQTVYEWAKD---REDTIVIVTADHE  317 (502)
T ss_dssp             TTCEEEEEEECSHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHTT---CSSEEEEEEEEEE
T ss_pred             CCceEEEEechhhhhhhccCC--HHHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCCC
Confidence            345666666667999999864  466778888999999999998865   4689999999996


No 34 
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp}
Probab=92.15  E-value=3.8  Score=47.76  Aligned_cols=104  Identities=15%  Similarity=0.080  Sum_probs=68.3

Q ss_pred             CeEEEEeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEcCCCCCCCCCCCCC---------
Q 002011          225 KLVIFLHLLGCDSNGHAHRPFSSIYLNNVKVVDHIAKRMYFLLEDYFKDNRTAYIFTADHGMSDKGSHGDG---------  295 (982)
Q Consensus       225 ~~v~flhllglD~~GH~~gp~S~~y~~~i~~vD~~Ig~il~~l~~~~~~~~TliI~TSDHGm~~~G~HG~~---------  295 (982)
                      |.+.|+-... +..+|... .+      +..=|..++++++.|.+...+++|++|+|=|-... ..+|-..         
T Consensus       336 P~vs~i~p~~-~~d~Hp~~-~~------~~~g~~~v~~v~~al~~sp~W~~T~iiit~DE~~G-~~DHV~pP~~p~~G~~  406 (498)
T 2d1g_A          336 PAVSYLKAPG-YQDGHGGY-SN------PLDEQEWLVNTINRIQQSKDWDSTAIIIIYDDSDG-DYDHVYSPKSQFSDIK  406 (498)
T ss_dssp             CSEEEEECCG-GGSCCTTT-CC------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEESCCTT-CCCCCCCCCCTTTTST
T ss_pred             CceEEEEcCC-CCCCCCCC-CC------hHHHHHHHHHHHHHHhcCccccCcEEEEEEECCCC-CccCcCCCCcCCCCcc
Confidence            6777775432 34456421 11      23458999999999998877899999999986432 2345221         


Q ss_pred             C--CCCceeeEEEeCCCcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhCCC
Q 002011          296 H--PTNTDTPLVVWGAGVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLGLP  369 (982)
Q Consensus       296 s--~~et~tPli~~g~Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlGlp  369 (982)
                      .  -...|+|+++-+|=++++..                                .....++.-|.-||-...|++
T Consensus       407 ~~~GlG~RVP~~viSP~~k~G~V--------------------------------~~~~~dH~Silrtie~~~gl~  450 (498)
T 2d1g_A          407 GRQGYGPRLPMLVISPYAKANYV--------------------------------DHSLLNQASVLKFIEYNWGIG  450 (498)
T ss_dssp             TCCCCCCBCCEEEESTTBCTTEE--------------------------------ECCCEETHHHHHHHHHHHTCC
T ss_pred             CccCCCCcceEEEecCCCCCCce--------------------------------eCCccchhHHHHHHHHHhCCC
Confidence            1  12578999998875543321                                123456788888999889988


No 35 
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=86.52  E-value=0.23  Score=56.27  Aligned_cols=21  Identities=24%  Similarity=0.343  Sum_probs=17.7

Q ss_pred             CCCCCCCCCCCceeeEEEeCCCcC
Q 002011          289 KGSHGDGHPTNTDTPLVVWGAGVQ  312 (982)
Q Consensus       289 ~G~HG~~s~~et~tPli~~g~Gv~  312 (982)
                      .|.||+.  .|+++||+++|| ++
T Consensus       364 ~g~HG~~--~~~~~p~i~~Gp-i~  384 (406)
T 1ei6_A          364 LRSHGGV--SEQKVPLIFNRK-LV  384 (406)
T ss_dssp             CEECCSG--GGCEEEEEESSC-BC
T ss_pred             CcCCCCc--ccccceEEEEEe-cc
Confidence            4789976  579999999999 85


No 36 
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=77.45  E-value=0.83  Score=52.45  Aligned_cols=43  Identities=16%  Similarity=0.162  Sum_probs=31.5

Q ss_pred             CCCCCCCCCCceeeEEEeCC--CcCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCccccccccccHHHHHHHhhC
Q 002011          290 GSHGDGHPTNTDTPLVVWGA--GVQHPKPISETNHSDCGFLFIDEHAHDMPTPSEWGLNGIERVDVNQADIAPLMSTLLG  367 (982)
Q Consensus       290 G~HG~~s~~et~tPli~~g~--Gv~~p~~~~~~~~~~~~~f~~~~~g~~~~~~~~w~l~~~~~~~v~qiDIaPTis~LlG  367 (982)
                      |+||..+  |.++||+++||  ++++...                                 .+..+.+|+|||-+.+.|
T Consensus       378 g~HG~~~--em~vp~i~~gp~~~~~~~~~---------------------------------~~~~~~~d~~~~~~~~~~  422 (427)
T 3szy_A          378 RSHGGLT--EQEVPFIVNRVLPELPNAPR---------------------------------LRNFDAFFYAVTAAAEAG  422 (427)
T ss_dssp             EECBSGG--GCEEEEEESSCCTTCCCTTT---------------------------------SBGGGHHHHHHHHHC---
T ss_pred             cCCCCcc--cccceEEEECCcccccccCc---------------------------------cCCcchhhhhhhhhhhcc
Confidence            7899766  88999999999  7664432                                 245688999999888754


No 37 
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=52.65  E-value=14  Score=42.12  Aligned_cols=58  Identities=21%  Similarity=0.339  Sum_probs=36.9

Q ss_pred             CeEEEEEECCCCcccccCCCCC---CCCCChHHHHHHHcCcccceeeeCCCCC---CchhhHHHh
Q 002011           69 KRLVLFVADGLRADKFYEPDSE---GNYRAPFLRSVIQNQGCWGVSHARPPTE---SRPGHVAII  127 (982)
Q Consensus        69 ~rVVlIviDGLRaD~l~~~~~~---~~~~~P~L~~L~~~gg~~~~s~t~~PT~---T~P~~~SL~  127 (982)
                      +|.|+++.||+.-.-..+..+.   ...++|||++|+++ |..|..++..|-.   |-++|.+++
T Consensus         5 ~k~i~~i~DG~~d~p~~~l~~~TpL~~A~tP~ld~la~~-g~~G~~~~v~~g~~pgSd~a~~~~~   68 (412)
T 2zkt_A            5 RKGLLIILDGLGDRPIKELNGLTPLEYANTPNMDKLAEI-GILGQQDPIKPGQPAGSDTAHLSIF   68 (412)
T ss_dssp             CEEEEEEETTBBCCCBGGGTTBCHHHHSCCHHHHHHHHH-SEEEEEESSSTTCCCCHHHHHHHHT
T ss_pred             ceEEEEEecCCCCCcccccCCCChhhhcCCchHHHHHhc-CcccceeccCCCCCCchHHHHHHHc
Confidence            3899999999975443221111   11369999999999 5567666654433   445555554


No 38 
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=46.67  E-value=14  Score=41.87  Aligned_cols=58  Identities=24%  Similarity=0.362  Sum_probs=36.4

Q ss_pred             CeEEEEEECCCCcccccCCCCC---CCCCChHHHHHHHcCcccceeeeCCC---CCCchhhHHHh
Q 002011           69 KRLVLFVADGLRADKFYEPDSE---GNYRAPFLRSVIQNQGCWGVSHARPP---TESRPGHVAII  127 (982)
Q Consensus        69 ~rVVlIviDGLRaD~l~~~~~~---~~~~~P~L~~L~~~gg~~~~s~t~~P---T~T~P~~~SL~  127 (982)
                      .|.|+++.||+.-.-+.+..+.   ...+|||+++++++ |..|..++..|   .-|-++|.||+
T Consensus         5 mK~i~ii~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~-g~~Gl~~~v~~G~~pgSd~a~lsl~   68 (399)
T 3kd8_A            5 KSIILIVLDGLGDRPGSDLQNRTPLQAAFRPNLNWLASH-GINGIMHPISPGIRCGSDTSHMSLL   68 (399)
T ss_dssp             CEEEEEEEESCCCCCBGGGTSBCHHHHSCCHHHHHHHHT-SEEEEEECCCC------CTTHHHHT
T ss_pred             ceEEEEEecCCCCCcchhcCCCCchhhcCCccHHHHHhc-CccCceecCCCCCCCchHHHHHHHc
Confidence            5899999999983333211111   11359999999999 55566666443   34667777775


Done!