Your job contains 1 sequence.
>002012
MASRRLTKTTFAALKSARHNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPNDV
VSAKLSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVV
ETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFGL
LLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRV
TDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPG
VGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKS
NGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPAL
ERRFQQVFCDQPSVENTISILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPDK
AIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLN
SLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISL
QRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEV
LHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNT
ENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQD
VFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKK
QVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEA
VTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIKEEDSVIIDVDDSPSAKDLPP
RNKLCIKKLESSSSIDAMVAND
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002012
(982 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q0E3C8 - symbol:CLPB3 "Chaperone protein ClpB3,... 3570 0. 1
TAIR|locus:2040159 - symbol:CLPB4 "casein lytic proteinas... 3553 0. 1
TAIR|locus:2180922 - symbol:CLPB3 "casein lytic proteinas... 3138 0. 1
UNIPROTKB|Q75GT3 - symbol:CLPB2 "Chaperone protein ClpB2,... 3083 0. 1
TIGR_CMR|GSU_0658 - symbol:GSU_0658 "ClpB protein" specie... 2343 3.8e-243 1
TIGR_CMR|BA_1177 - symbol:BA_1177 "ATP-dependent Clp prot... 2329 1.2e-241 1
GENEDB_PFALCIPARUM|PF08_0063 - symbol:PF08_0063 "ClpB pro... 1259 3.3e-241 3
UNIPROTKB|Q8IB03 - symbol:PF08_0063 "ClpB protein, putati... 1259 3.3e-241 3
UNIPROTKB|Q9KU18 - symbol:clpB "Chaperone protein ClpB" s... 2249 3.5e-233 1
TIGR_CMR|VC_0711 - symbol:VC_0711 "clpB protein" species:... 2249 3.5e-233 1
UNIPROTKB|P63288 - symbol:clpB "Chaperone protein ClpB" s... 2044 1.1e-231 2
TIGR_CMR|CBU_0094 - symbol:CBU_0094 "clpB protein" specie... 2233 1.7e-231 1
TIGR_CMR|CPS_3913 - symbol:CPS_3913 "ATP-dependent chaper... 2226 9.6e-231 1
UNIPROTKB|P63284 - symbol:clpB "ClpB chaperone" species:8... 2204 2.1e-228 1
TIGR_CMR|SO_3577 - symbol:SO_3577 "clpB protein" species:... 2202 3.4e-228 1
TIGR_CMR|SPO_3276 - symbol:SPO_3276 "ATP-dependent Clp pr... 2195 1.9e-227 1
UNIPROTKB|Q889C2 - symbol:clpB "Chaperone protein ClpB" s... 2194 2.4e-227 1
DICTYBASE|DDB_G0291314 - symbol:DDB_G0291314 "putative en... 2172 5.1e-225 1
TIGR_CMR|NSE_0119 - symbol:NSE_0119 "ClpB protein" specie... 2126 3.8e-220 1
TIGR_CMR|ECH_0367 - symbol:ECH_0367 "ATP-dependent Clp pr... 2084 1.1e-215 1
TIGR_CMR|APH_0235 - symbol:APH_0235 "ATP-dependent chaper... 2057 7.8e-213 1
TAIR|locus:2019667 - symbol:HSP101 "heat shock protein 10... 2011 5.8e-208 1
UNIPROTKB|Q6F2Y7 - symbol:CLPB1 "Chaperone protein ClpB1"... 1989 1.3e-205 1
POMBASE|SPBC16D10.08c - symbol:SPBC16D10.08c "heat shock ... 1933 1.1e-199 1
DICTYBASE|DDB_G0289047 - symbol:DDB_G0289047 "putative en... 1925 7.6e-199 1
UNIPROTKB|Q3A9N1 - symbol:CHY_2348 "Negative regulator of... 1008 1.4e-198 2
TIGR_CMR|CHY_2348 - symbol:CHY_2348 "negative regulator o... 1008 1.4e-198 2
UNIPROTKB|G4MSB3 - symbol:MGG_04437 "Heat shock protein 7... 1855 1.1e-194 2
CGD|CAL0002893 - symbol:HSP78 species:5476 "Candida albic... 1870 5.1e-193 1
POMBASE|SPBC4F6.17c - symbol:SPBC4F6.17c "mitochondrial h... 1859 7.5e-192 1
TAIR|locus:2157383 - symbol:CLPC1 "CLPC homologue 1" spec... 936 2.5e-188 2
SGD|S000002666 - symbol:HSP78 "Oligomeric mitochondrial m... 1815 3.4e-187 1
ASPGD|ASPL0000062455 - symbol:AN1163 species:162425 "Emer... 1808 1.9e-186 1
ASPGD|ASPL0000053926 - symbol:hsp104 species:162425 "Emer... 1805 3.9e-186 1
UNIPROTKB|G4N778 - symbol:MGG_06459 "Hsp98-like protein" ... 1804 5.0e-186 1
TIGR_CMR|CJE_0616 - symbol:CJE_0616 "ATP-dependent chaper... 1801 1.0e-185 1
UNIPROTKB|P0A522 - symbol:clpC "Probable ATP-dependent Cl... 903 7.8e-183 2
TIGR_CMR|DET_0057 - symbol:DET_0057 "ATP-dependent Clp pr... 901 2.6e-182 2
CGD|CAL0001410 - symbol:HSP104 species:5476 "Candida albi... 1666 1.4e-174 2
UNIPROTKB|Q5A376 - symbol:HSP104 "Putative uncharacterize... 1666 1.4e-174 2
SGD|S000003949 - symbol:HSP104 "Disaggregase" species:493... 1684 2.6e-173 1
TAIR|locus:2157363 - symbol:ERD1 "EARLY RESPONSIVE TO DEH... 821 1.3e-157 3
UNIPROTKB|Q6H795 - symbol:CLPD1 "Chaperone protein ClpD1,... 827 8.8e-153 3
GENEDB_PFALCIPARUM|PF11_0175 - symbol:PF11_0175 "heat sho... 1436 5.0e-147 1
UNIPROTKB|Q8IIJ8 - symbol:PF11_0175 "Heat shock protein 1... 1436 5.0e-147 1
TAIR|locus:2130070 - symbol:CLPB2 "casein lytic proteinas... 1371 3.9e-140 1
UNIPROTKB|Q74G19 - symbol:tssH "Type VI secretion system ... 1340 2.7e-139 2
TIGR_CMR|GSU_0433 - symbol:GSU_0433 "clpB protein, putati... 1340 2.7e-139 2
TIGR_CMR|SPO_3169 - symbol:SPO_3169 "ATP-dependent Clp pr... 708 4.4e-139 3
TIGR_CMR|CPS_2893 - symbol:CPS_2893 "ATP-dependent Clp pr... 745 4.0e-138 2
UNIPROTKB|Q9KSW2 - symbol:VC_1144 "ATP-dependent Clp prot... 716 3.7e-133 2
TIGR_CMR|VC_1144 - symbol:VC_1144 "ATP-dependent Clp prot... 716 3.7e-133 2
UNIPROTKB|P0ABH9 - symbol:clpA "ClpA" species:83333 "Esch... 707 7.6e-133 2
TIGR_CMR|CBU_1196 - symbol:CBU_1196 "ATP-dependent Clp pr... 681 1.8e-132 2
TIGR_CMR|SO_2626 - symbol:SO_2626 "ATP-dependent Clp prot... 692 8.7e-132 2
UNIPROTKB|Q9KN49 - symbol:VC_A0116 "ClpB protein" species... 1167 1.6e-118 1
TIGR_CMR|VC_A0116 - symbol:VC_A0116 "clpB protein" specie... 1167 1.6e-118 1
TIGR_CMR|CJE_1251 - symbol:CJE_1251 "ATP-dependent Clp pr... 647 8.9e-115 2
GENEDB_PFALCIPARUM|PF14_0063 - symbol:PF14_0063 "ATP-depe... 932 2.5e-114 4
UNIPROTKB|Q8IM28 - symbol:PF14_0063 "ATP-dependent CLP pr... 932 2.5e-114 4
UNIPROTKB|Q81VV9 - symbol:BAS0081 "Negative regulator of ... 1001 6.4e-108 2
TIGR_CMR|BA_0080 - symbol:BA_0080 "negative regulator of ... 1001 6.4e-108 2
TIGR_CMR|DET_1413 - symbol:DET_1413 "chaperone ClpB" spec... 1051 3.1e-106 1
UNIPROTKB|Q724I0 - symbol:LMOf2365_0244 "ClpC ATPase" spe... 946 4.1e-102 2
TAIR|locus:2099433 - symbol:HSP93-III species:3702 "Arabi... 932 1.3e-93 1
TIGR_CMR|ECH_0567 - symbol:ECH_0567 "ATP-dependent Clp pr... 661 2.5e-69 2
TIGR_CMR|APH_0450 - symbol:APH_0450 "ATP-dependent Clp pr... 634 2.8e-64 2
TIGR_CMR|NSE_0313 - symbol:NSE_0313 "ATP-dependent Clp pr... 640 3.0e-62 1
UNIPROTKB|I3LJ13 - symbol:LOC100524385 "Uncharacterized p... 441 1.5e-53 3
UNIPROTKB|B4DXW4 - symbol:CLPB "cDNA FLJ53238, highly sim... 444 2.5e-52 2
UNIPROTKB|F1M955 - symbol:Clpb "Caseinolytic peptidase B ... 441 5.4e-52 2
MGI|MGI:1100517 - symbol:Clpb "ClpB caseinolytic peptidas... 443 1.8e-48 2
UNIPROTKB|E2R362 - symbol:CLPB "Uncharacterized protein" ... 441 2.5e-48 2
UNIPROTKB|Q5E9N5 - symbol:CLPB "Caseinolytic peptidase B ... 441 3.8e-48 3
UNIPROTKB|F6XXW3 - symbol:CLPB "Uncharacterized protein" ... 441 4.4e-48 2
RGD|621328 - symbol:Clpb "ClpB caseinolytic peptidase B h... 442 6.1e-48 2
UNIPROTKB|Q9H078 - symbol:CLPB "Caseinolytic peptidase B ... 442 9.1e-48 3
UNIPROTKB|H0YGM0 - symbol:CLPB "Caseinolytic peptidase B ... 442 1.0e-47 3
UNIPROTKB|H0YFF5 - symbol:CLPB "Caseinolytic peptidase B ... 442 8.3e-42 2
TAIR|locus:2085592 - symbol:AT3G45450 species:3702 "Arabi... 407 2.2e-41 2
UNIPROTKB|F5GX99 - symbol:CLPB "Caseinolytic peptidase B ... 444 7.0e-41 1
UNIPROTKB|Q7Z777 - symbol:CLPB "Caseinolytic peptidase B ... 320 1.4e-27 1
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 304 6.4e-23 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 278 1.9e-20 2
TAIR|locus:2118806 - symbol:AT4G30350 "AT4G30350" species... 156 5.7e-12 3
TAIR|locus:2007412 - symbol:AT1G07200 "AT1G07200" species... 140 1.4e-10 4
TAIR|locus:2172585 - symbol:AT5G57710 species:3702 "Arabi... 149 5.2e-10 3
TAIR|locus:2065074 - symbol:AT2G40130 species:3702 "Arabi... 141 1.6e-09 2
TAIR|locus:2079904 - symbol:AT3G52490 species:3702 "Arabi... 112 1.8e-06 2
TAIR|locus:2045653 - symbol:AT2G29970 species:3702 "Arabi... 107 3.0e-06 4
UNIPROTKB|F1P2B1 - symbol:TOR1A "Uncharacterized protein"... 139 4.9e-06 1
FB|FBgn0025615 - symbol:Torsin "Torsin" species:7227 "Dro... 137 8.0e-06 1
UNIPROTKB|I3LEE0 - symbol:I3LEE0 "Uncharacterized protein... 114 1.5e-05 1
TAIR|locus:2145141 - symbol:AT5G52280 "AT5G52280" species... 132 2.4e-05 2
UNIPROTKB|F1MX93 - symbol:Bt.112041 "Uncharacterized prot... 131 6.1e-05 2
RGD|1310101 - symbol:Tor3a "torsin family 3, member A" sp... 130 6.3e-05 1
UNIPROTKB|Q5M936 - symbol:Tor3a "Torsin-3A" species:10116... 130 6.3e-05 1
UNIPROTKB|F1NNI2 - symbol:LONP1 "Uncharacterized protein"... 133 7.7e-05 1
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 94 8.2e-05 3
MGI|MGI:1353652 - symbol:Tor3a "torsin family 3, member A... 127 0.00013 1
WARNING: Descriptions of 25 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q0E3C8 [details] [associations]
symbol:CLPB3 "Chaperone protein ClpB3, mitochondrial"
species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR017730 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0009507 GO:GO:0009408
GO:GO:0017111 GO:GO:0016485 EMBL:AP008208 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03695 ProtClustDB:CLSN2688403 TIGRFAMs:TIGR03346 EMBL:AK287906
RefSeq:NP_001046096.2 UniGene:Os.5574 GeneID:4328515
GenomeReviews:AP008208_GR KEGG:osa:4328515 Gramene:Q0E3C8
OMA:RAGLHSH Uniprot:Q0E3C8
Length = 983
Score = 3570 (1261.8 bits), Expect = 0., P = 0.
Identities = 699/909 (76%), Positives = 794/909 (87%)
Query: 74 RKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQK 133
R FH + R ST+ SQITP EFTE AWEG+VGAVDAAR++ QQVVE EHLMKALLEQK
Sbjct: 77 RLFHPTQAARYSTSSSSQITPGEFTEMAWEGVVGAVDAARMSKQQVVEAEHLMKALLEQK 136
Query: 134 DGLARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEME 193
DGLARRI +KAG DNT VLQAT++FIS+QPKV G TSGPI+GS+F +L NA++ KKE
Sbjct: 137 DGLARRIFSKAGIDNTSVLQATDEFISRQPKVVGDTSGPIIGSSFVSILDNARKHKKEYA 196
Query: 194 DDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALE 253
D+FVSVEH+L AF D RFG+ LF D+++ E +LK+A+ AVRG QRVTDQNPEGKYQALE
Sbjct: 197 DEFVSVEHILRAFTEDKRFGQQLFRDLKIGENELKEAISAVRGSQRVTDQNPEGKYQALE 256
Query: 254 KYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQR 313
KYG D+TELAR GKLDPVIGRDDE+RRCIQIL RRTKNNPVIIGEPGVGKTAIAEGLAQR
Sbjct: 257 KYGIDMTELARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQR 316
Query: 314 IVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHT 373
IVRGDVPE LQNRKLISLDM +L+AG ++G FE+RLKAVLKE+T SNGQIILFIDE+HT
Sbjct: 317 IVRGDVPEPLQNRKLISLDMGALLAGAKFQGQFEERLKAVLKEITASNGQIILFIDEIHT 376
Query: 374 IIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPS 433
I+GAG GAMDA N+LKPMLGRGELRCIGATTL+EYR YIEKD ALERRFQQV+C +P+
Sbjct: 377 IVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDAALERRFQQVYCGEPA 436
Query: 434 VENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLK 493
VE+TISILRGLRERYELHHGVKI RYIT RFLPDKAIDLVDEAAAKLK
Sbjct: 437 VEDTISILRGLRERYELHHGVKISDGALVSAAVLSDRYITGRFLPDKAIDLVDEAAAKLK 496
Query: 494 MEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQW 553
MEITSKPIELDE+DR +++LEMEKLSLKNDTDKASK+RLSKLE DL SLKQKQK L++ W
Sbjct: 497 MEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKQRLSKLEADLESLKQKQKNLSEHW 556
Query: 554 SREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSE 613
EK LM+RIRSIKEE DRVNLE+EAAER+YDLNRAAELKYGT++SLQ+QLEEAE L E
Sbjct: 557 EYEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAELKYGTLLSLQKQLEEAENKLME 616
Query: 614 FQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVK 673
FQ+SG S+LREEVTD+DIAEIVSKWTGIP+S+LQQSE+EKL++LE+VLHKRVIGQDIAVK
Sbjct: 617 FQQSGKSMLREEVTDVDIAEIVSKWTGIPVSNLQQSEKEKLLLLEDVLHKRVIGQDIAVK 676
Query: 674 SVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYM 733
SVA+AIRRSRAGLSDP RPIAS MFMGPTGVGKTELGK LA+FLFNTENAL+RIDMSEYM
Sbjct: 677 SVANAIRRSRAGLSDPNRPIASLMFMGPTGVGKTELGKTLAEFLFNTENALIRIDMSEYM 736
Query: 734 EKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGR 793
EKH+VSRLVGAPPGY+GY EGGQLTE VRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGR
Sbjct: 737 EKHAVSRLVGAPPGYIGYGEGGQLTEAVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGR 796
Query: 794 ITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPE 853
ITDSQGRTVSFTNCV+IMTSNIGS IL+TL++ DSKEAVYE+MKKQV+++ARQ+FRPE
Sbjct: 797 ITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTSDSKEAVYEIMKKQVIDMARQSFRPE 856
Query: 854 FLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNF 913
FLNRIDEYIVFQPLD+ EI++IVEIQ+NRVK+RL+Q+KI L YT EAV LG LGFDPN+
Sbjct: 857 FLNRIDEYIVFQPLDTTEINRIVEIQLNRVKNRLRQQKIHLQYTPEAVEHLGSLGFDPNY 916
Query: 914 GARPVKRVIQQLVENEIAVAILKGDIKXXXXXXXXXXXXPSAKDLPPRNKLCIKKLESSS 973
GARPVKRVIQQ+VENEIA+++LKGD K AK L P+ KL +++LE+++
Sbjct: 917 GARPVKRVIQQMVENEIALSVLKGDFKEDDTVLVDVSSVAIAKGLAPQKKLVLQRLENAN 976
Query: 974 SIDAMVAND 982
+VAND
Sbjct: 977 L--ELVAND 983
>TAIR|locus:2040159 [details] [associations]
symbol:CLPB4 "casein lytic proteinase B4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009408 "response to heat"
evidence=IEA;ISS;RCA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0042542 "response to
hydrogen peroxide" evidence=RCA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009941 GO:GO:0009408 GO:GO:0017111 GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 ProtClustDB:CLSN2688403 TIGRFAMs:TIGR03346 HSSP:P03815
EMBL:AY070722 EMBL:BT002223 IPI:IPI00528075 PIR:G84644
RefSeq:NP_565586.1 UniGene:At.28343 ProteinModelPortal:Q8VYJ7
SMR:Q8VYJ7 IntAct:Q8VYJ7 PaxDb:Q8VYJ7 PRIDE:Q8VYJ7 ProMEX:Q8VYJ7
EnsemblPlants:AT2G25140.1 GeneID:817052 KEGG:ath:AT2G25140
GeneFarm:2729 TAIR:At2g25140 InParanoid:Q8VYJ7 OMA:SHHILET
PhylomeDB:Q8VYJ7 Genevestigator:Q8VYJ7 Uniprot:Q8VYJ7
Length = 964
Score = 3553 (1255.8 bits), Expect = 0., P = 0.
Identities = 725/980 (73%), Positives = 820/980 (83%)
Query: 1 MASRRLTKTTFAALKSARHNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPNDV 60
MA RRL+K+ +A+K A++ LS R++S+S+ +++ S+ RP N I +
Sbjct: 1 MALRRLSKSVSSAIK-AQYT-LSRPSPLLRSRSLSSSPHYT-SIGRPT--NSFI---GKI 52
Query: 61 VSAKLSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVV 120
++ ++ T + F S+P R TT +Q+ EFTE AWEG++ A DAAR + QQ+V
Sbjct: 53 NNSSITHATTTHGQLFPLSSPRRFCTT-TAQVNQNEFTEMAWEGLINAFDAARESKQQIV 111
Query: 121 ETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFGL 180
E+EHLMKALLEQKDG+AR+I TKAG DN+ VLQAT+ FISKQP V+ A SG +GS+ +
Sbjct: 112 ESEHLMKALLEQKDGMARKIFTKAGIDNSSVLQATDLFISKQPTVSDA-SGQRLGSSLSV 170
Query: 181 LLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRV 240
+L NA+R KK+M D +VSVEH LLA+ SD RFG+ F D++L+ + LKDA+K VRG QRV
Sbjct: 171 ILENAKRHKKDMLDSYVSVEHFLLAYYSDTRFGQEFFRDMKLDIQVLKDAIKDVRGDQRV 230
Query: 241 TDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPG 300
TD+NPE KYQALEKYGNDLTE+AR GKLDPVIGRDDEIRRCIQIL RRTKNNPVIIGEPG
Sbjct: 231 TDRNPESKYQALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPG 290
Query: 301 VGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKS 360
VGKTAIAEGLAQRIVRGDVPE L NRKLISLDM SL+AG +RGDFE+RLKAV+KEV+ S
Sbjct: 291 VGKTAIAEGLAQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVMKEVSAS 350
Query: 361 NGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPAL 420
NGQ ILFIDE+HT++GAG GAMDASN+LKPMLGRGELRCIGATTL EYR YIEKDPAL
Sbjct: 351 NGQTILFIDEIHTVVGAGAMDGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKDPAL 410
Query: 421 ERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDK 480
ERRFQQV C QPSVE+TISILRGLRERYELHHGV I RYITERFLPDK
Sbjct: 411 ERRFQQVLCVQPSVEDTISILRGLRERYELHHGVTISDSALVSAAVLADRYITERFLPDK 470
Query: 481 AIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLN 540
AIDLVDEA AKLKMEITSKP ELD IDRAV+KLEMEKLSLKNDTDKASKERL K+E+DL+
Sbjct: 471 AIDLVDEAGAKLKMEITSKPTELDGIDRAVIKLEMEKLSLKNDTDKASKERLQKIENDLS 530
Query: 541 SLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISL 600
+LKQKQKELN QW +EK LM++IRS KEEIDRVNLE+E+AER+YDLNRAAELKYGT++SL
Sbjct: 531 TLKQKQKELNVQWEKEKSLMTKIRSFKEEIDRVNLEIESAEREYDLNRAAELKYGTLLSL 590
Query: 601 QRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEV 660
QRQLEEAEKNL+ F++ G SLLRE VTDLDIAEIVSKWTGIPLS+LQQSEREKLVMLEEV
Sbjct: 591 QRQLEEAEKNLTNFRQFGQSLLREVVTDLDIAEIVSKWTGIPLSNLQQSEREKLVMLEEV 650
Query: 661 LHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNT 720
LH RVIGQD+AVKSVADAIRRSRAGLSDP RPIASFMFMGPTGVGKTEL KALA +LFNT
Sbjct: 651 LHHRVIGQDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNT 710
Query: 721 ENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQD 780
ENA+VR+DMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAH D
Sbjct: 711 ENAIVRVDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHPD 770
Query: 781 VFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKK 840
VFNILLQLLDDGRITDSQGRTVSF NCVVIMTSNIGSH+ILETL++ +DSKEAVYE+MK+
Sbjct: 771 VFNILLQLLDDGRITDSQGRTVSFKNCVVIMTSNIGSHHILETLRNNEDSKEAVYEIMKR 830
Query: 841 QVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEA 900
QVVELARQ FRPEF+NRIDEYIVFQPLDS EISKIVE+QM RVK+ L+QKKI L YTKEA
Sbjct: 831 QVVELARQNFRPEFMNRIDEYIVFQPLDSNEISKIVELQMRRVKNSLEQKKIKLQYTKEA 890
Query: 901 VTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIKXXXXXXXXXXXXPSAKDLPP 960
V LL LGFDPN+GARPVKRVIQQ+VENEIAV ILKGD A D
Sbjct: 891 VDLLAQLGFDPNYGARPVKRVIQQMVENEIAVGILKGDFAEEDTVLVDVDHL--ASD--- 945
Query: 961 RNKLCIKKLESSSSIDAMVA 980
NKL IKKLES++S + M A
Sbjct: 946 -NKLVIKKLESNASAEEMAA 964
>TAIR|locus:2180922 [details] [associations]
symbol:CLPB3 "casein lytic proteinase B3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0009408 "response to
heat" evidence=IEA;IEP;ISS] [GO:0016485 "protein processing"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0009570 GO:GO:0009658 GO:GO:0009408
GO:GO:0017111 GO:GO:0016485 EMBL:AL391143 eggNOG:COG0542
Gene3D:1.10.1780.10 InterPro:IPR023150 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211 KO:K03695
ProtClustDB:CLSN2688403 TIGRFAMs:TIGR03346 EMBL:BT000447
EMBL:BT002569 IPI:IPI00533158 PIR:T51523 RefSeq:NP_568314.1
UniGene:At.49023 UniGene:At.66737 HSSP:P03815
ProteinModelPortal:Q9LF37 SMR:Q9LF37 IntAct:Q9LF37 PRIDE:Q9LF37
ProMEX:Q9LF37 EnsemblPlants:AT5G15450.1 GeneID:831398
KEGG:ath:AT5G15450 GeneFarm:1950 TAIR:At5g15450 InParanoid:Q9LF37
OMA:LIQDRFG PhylomeDB:Q9LF37 Genevestigator:Q9LF37 Uniprot:Q9LF37
Length = 968
Score = 3138 (1109.7 bits), Expect = 0., P = 0.
Identities = 621/953 (65%), Positives = 754/953 (79%)
Query: 28 GSRAKSISTFTNFSNSLSRPPIENKLILPPNDVVSAKLSFTTVGFARKFHSSTPLR---S 84
G+ + I +F++ S + P P+ S KL + R H +R S
Sbjct: 19 GTETRRIYSFSHLQPSAAFPA-------KPSSFKSLKLKQSARLTRRLDHRPFVVRCEAS 71
Query: 85 STTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKA 144
S+ G ++T EFTE AW+ IV + D A+ N QQ+VETEHLMKALLEQK+GLARRI +K
Sbjct: 72 SSNG--RLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLARRIFSKI 129
Query: 145 GQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLL 204
G DNTKVL+ATE FI +QPKV G +G ++G + L A++ KK+++D +VSVEHL+L
Sbjct: 130 GVDNTKVLEATEKFIQRQPKVYGDAAGSMLGRDLEALFQRARQFKKDLKDSYVSVEHLVL 189
Query: 205 AFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELAR 264
AF D RFG+ LF D +++E+ LK A++++RG Q V DQ+PEGKY+ALEKYG DLT +AR
Sbjct: 190 AFADDKRFGKQLFKDFQISERSLKSAIESIRGKQSVIDQDPEGKYEALEKYGKDLTAMAR 249
Query: 265 SGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQ 324
GKLDPVIGRDDEIRRCIQILSRRTKNNPV+IGEPGVGKTAI+EGLAQRIV+GDVP+ L
Sbjct: 250 EGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALM 309
Query: 325 NRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAM 384
NRKLISLDM +L+AG YRG+FE RLKAVLKEVT S GQIILFIDE+HT++GAG +GAM
Sbjct: 310 NRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAM 369
Query: 385 DASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGL 444
DA N+LKPMLGRGELRCIGATTL+EYR YIEKDPALERRFQQV+ DQP+VE+TISILRGL
Sbjct: 370 DAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGL 429
Query: 445 RERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELD 504
RERYELHHGV+I RYI+ RFLPDKAIDLVDEAAAKLKMEITSKP LD
Sbjct: 430 RERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALD 489
Query: 505 EIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIR 564
E+DR+V+KLEME+LSL NDTDKAS+ERL+++E +L LK+KQ EL +QW E+ +MSR++
Sbjct: 490 ELDRSVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEHERSVMSRLQ 549
Query: 565 SIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLRE 624
SIKEEIDRVNLE++ AER+YDLNRAAELKYG++ SLQRQL EAEK L+E+ SG S+ RE
Sbjct: 550 SIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELNEYLSSGKSMFRE 609
Query: 625 EVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRA 684
EV DIAEIVSKWTGIP+S LQQSER+KL+ LEE LHKRV+GQ+ AV +VA+AI+RSRA
Sbjct: 610 EVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHKRVVGQNPAVTAVAEAIQRSRA 669
Query: 685 GLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGA 744
GLSDP RPIASFMFMGPTGVGKTEL KALA ++FNTE ALVRIDMSEYMEKH+VSRL+GA
Sbjct: 670 GLSDPGRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGA 729
Query: 745 PPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSF 804
PPGYVGYEEGGQLTE VRRRPYSV+LFDEIEKAH DVFN+ LQ+LDDGR+TDSQGRTVSF
Sbjct: 730 PPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRTVSF 789
Query: 805 TNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVF 864
TN V+IMTSN+GS +IL D+ E YE +K++V+ AR FRPEF+NR+DEYIVF
Sbjct: 790 TNTVIIMTSNVGSQFILNNTDD--DANELSYETIKERVMNAARSIFRPEFMNRVDEYIVF 847
Query: 865 QPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQ 924
+PLD ++I++IV +Q+ RV+ R+ +K+ ++ T AV LLG LG+DPN+GARPVKRVIQQ
Sbjct: 848 KPLDREQINRIVRLQLARVQKRIADRKMKINITDAAVDLLGSLGYDPNYGARPVKRVIQQ 907
Query: 925 LVENEIAVAILKGDIKXXXXXXXXXXXXPSAKDLPPRNKLCIKKLESSSSIDA 977
+ENE+A IL+GD K + P+ KL KK+ES ++ DA
Sbjct: 908 NIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLTFKKIESETA-DA 959
>UNIPROTKB|Q75GT3 [details] [associations]
symbol:CLPB2 "Chaperone protein ClpB2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR017730 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0009507 GO:GO:0009570
GO:GO:0009658 EMBL:DP000009 EMBL:AP008209 GO:GO:0009408
GO:GO:0017111 GO:GO:0016485 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 EMBL:AC133398 EMBL:AC137999 EMBL:AK069123
RefSeq:NP_001050410.1 UniGene:Os.7626 ProteinModelPortal:Q75GT3
PRIDE:Q75GT3 EnsemblPlants:LOC_Os03g31300.1 GeneID:4333161
GenomeReviews:AP008209_GR KEGG:osa:4333161 Gramene:Q75GT3
OMA:NIRDINA ProtClustDB:CLSN2688403 TIGRFAMs:TIGR03346
Uniprot:Q75GT3
Length = 978
Score = 3083 (1090.3 bits), Expect = 0., P = 0.
Identities = 598/885 (67%), Positives = 723/885 (81%)
Query: 91 QITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTK 150
+IT EFTE AW+ IV + + A+ + Q+VETEHLMK+LLEQ++GLARRI +KAG DNT+
Sbjct: 83 RITQQEFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNTR 142
Query: 151 VLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD 210
+L ATE FI +QPKV G G ++G + L+ A+ KKE D FVSVEHL+L F D
Sbjct: 143 LLDATEKFIQRQPKVLGEDPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAEDK 202
Query: 211 RFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP 270
RFGR LF D ++ + LK A++++RG Q V DQ+PEGKY+AL+KYG DLT +AR GKLDP
Sbjct: 203 RFGRQLFKDFQITVQSLKTAIESIRGKQNVIDQDPEGKYEALDKYGKDLTAMARQGKLDP 262
Query: 271 VIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLIS 330
VIGRDDEIRRCIQILSRRTKNNPV+IGEPGVGKTAIAEGLAQRIV+GDVP+ L NR+LI+
Sbjct: 263 VIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRLIA 322
Query: 331 LDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNML 390
LDM +L+AG YRG+FE RLKAVLKEVT S+GQ ILFIDE+HT++GAG +GAMDA N+L
Sbjct: 323 LDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGNLL 382
Query: 391 KPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYEL 450
KPMLGRGELRCIGATTL+EYR YIEKDPALERRFQQV+ DQPSVE+TISILRGLRERYEL
Sbjct: 383 KPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERYEL 442
Query: 451 HHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAV 510
HHGV+I RYI+ RFLPDKAIDLVDE+AAKLKMEITSKP LDEIDRAV
Sbjct: 443 HHGVRISDSALVAAALLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDRAV 502
Query: 511 LKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEI 570
+KLEME+LSL NDTDKAS++RLS++E +L+ LK+KQK+L +QW REK +M++I+SIKEEI
Sbjct: 503 IKLEMERLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKEEI 562
Query: 571 DRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLD 630
DRVN+E++ AER+YDLNRAAELKYG++ +LQRQL+ EK L E+Q SG S+LREEVT D
Sbjct: 563 DRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQDD 622
Query: 631 IAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPA 690
IAEIVS+WTGIP+S L+QS+REKL+ LEE LHKRV+GQD AVK+V++AI+RSRAGLSDP
Sbjct: 623 IAEIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVSEAIQRSRAGLSDPN 682
Query: 691 RPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVG 750
RPIASFMFMGPTGVGKTEL KALA F+FNTE A+VRIDMSEYMEKHSVSRL+GAPPGYVG
Sbjct: 683 RPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGYVG 742
Query: 751 YEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVI 810
YEEGGQLTE VRRRPYS++LFDEIEKAH DVFN+ LQ+LDDGR+TDSQGR VSFTN ++I
Sbjct: 743 YEEGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIII 802
Query: 811 MTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSK 870
MTSN+GS +IL + S ++ YE +KK+V++ AR FRPEF+NRIDEYIVF+PL+ +
Sbjct: 803 MTSNVGSQFILN-MDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLERE 861
Query: 871 EISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEI 930
+I+ IV++Q+ RV+ R+ +KI L + AV LG LG+DPN+GARPVKRVIQQ VENE+
Sbjct: 862 QINSIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENEL 921
Query: 931 AVAILKGDIKXXXXXXXXXXXX-PSAKDLPPRNKLCIKKLESSSS 974
A IL+GD K PS LP + KL K+ S+
Sbjct: 922 AKGILRGDFKDEDSILVDTQVTVPSNGQLP-QQKLVFHKMSEESA 965
>TIGR_CMR|GSU_0658 [details] [associations]
symbol:GSU_0658 "ClpB protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0009408 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0017111 GO:GO:0016485 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03695 TIGRFAMs:TIGR03346 HOGENOM:HOG000218209
RefSeq:NP_951715.1 ProteinModelPortal:Q74FF1 SMR:Q74FF1
PRIDE:Q74FF1 GeneID:2685505 KEGG:gsu:GSU0658 PATRIC:22024073
OMA:FEERINA ProtClustDB:CLSK827978
BioCyc:GSUL243231:GH27-668-MONOMER Uniprot:Q74FF1
Length = 865
Score = 2343 (829.8 bits), Expect = 3.8e-243, P = 3.8e-243
Identities = 466/850 (54%), Positives = 619/850 (72%)
Query: 92 ITPTEFTEKAWEGIVGAVD-AARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTK 150
I P + T K E + GA AAR N + E EHL+ +LLEQ+ GL I+ K G
Sbjct: 2 IRPEKMTIKTQEALAGAQQLAARQGNGSI-EPEHLLVSLLEQEGGLIAPIIQKVGGAPAA 60
Query: 151 VLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD 210
+ A + + + P+V+GAT+ + +L AQR M+D+FVS EHLLL F +D
Sbjct: 61 LRSAADVLVKRLPQVSGATAQAYLSPALNRILDAAQREADTMKDEFVSTEHLLLGFFADR 120
Query: 211 RFG--RLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKL 268
+ R L D ++ ++ A+ +RG +RVTDQNPE YQAL KY DLT+LAR GKL
Sbjct: 121 QCAAARALL-DAGVSRDNVLAALMEIRGGERVTDQNPEDTYQALAKYARDLTDLARQGKL 179
Query: 269 DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKL 328
DPVIGRDDEIRR +Q+LSRRTKNNPV+IGEPGVGKTAI EGLAQRIV GDVPETL++++L
Sbjct: 180 DPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPETLKDKRL 239
Query: 329 ISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASN 388
++LDM +L+AG YRG+FE+RLKAV++EV KS G++ILFIDELHT++GAG GAMDASN
Sbjct: 240 VALDMGALIAGAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASN 299
Query: 389 MLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERY 448
MLKP L RGEL CIGATTLNEYR YIEKD ALERRFQQV+ +PSVE+TI+ILRGL+E+Y
Sbjct: 300 MLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKY 359
Query: 449 ELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDR 508
E +HG++I RYIT+RFLPDKAIDL+DEAA++L++EI S P E+DE++R
Sbjct: 360 ENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVER 419
Query: 509 AVLKLEMEKLSLKNDT-DKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIK 567
+++LE+EK +L ++ D S ERL KL +L LK K EL W REKD++ R+ S++
Sbjct: 420 RIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLR 479
Query: 568 EEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVT 627
+ ++ E + AER+ +L R AE++YG + ++++++ + L + +K G +L EEV
Sbjct: 480 QRLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKEG-KMLPEEVD 538
Query: 628 DLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLS 687
+AEIVS+WTGIP+S + + E +KLV +E+ L RV+GQD A+ VA+AIRR+R+GLS
Sbjct: 539 GELVAEIVSRWTGIPVSRMMEGEADKLVHMEDRLITRVVGQDEALVLVANAIRRARSGLS 598
Query: 688 DPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPG 747
DP RPI SF+F+GPTGVGKTE KALA+FLFN + A+VRIDMSEY EKH+V+RL+GAPPG
Sbjct: 599 DPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAPPG 658
Query: 748 YVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNC 807
YVGYEEGGQLTE VRRRPYS+VLFDEIEKAH +VFN+LLQ+LDDGR+TD QGRTV F N
Sbjct: 659 YVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNT 718
Query: 808 VVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPL 867
V+IMTSN+GS +I Q + Y MK V E ++ F+PEFLNRIDE +++ L
Sbjct: 719 VIIMTSNLGSQWI-------QQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHAL 771
Query: 868 DSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVE 927
++I KIV+IQ+ +K RL ++I L + +A L G+DP +GARP+KR IQ+ ++
Sbjct: 772 PLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQ 831
Query: 928 NEIAVAILKG 937
+ +A+A+L+G
Sbjct: 832 DPLALALLEG 841
>TIGR_CMR|BA_1177 [details] [associations]
symbol:BA_1177 "ATP-dependent Clp protease, ATP-binding
subunit ClpB" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0009408 GO:GO:0017111 GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03695 OMA:DTEKAVM
TIGRFAMs:TIGR03346 RefSeq:NP_843655.1 RefSeq:YP_017790.1
RefSeq:YP_027362.1 ProteinModelPortal:Q81TT4 SMR:Q81TT4
IntAct:Q81TT4 PRIDE:Q81TT4 DNASU:1086217
EnsemblBacteria:EBBACT00000009438 EnsemblBacteria:EBBACT00000014904
EnsemblBacteria:EBBACT00000021329 GeneID:1086217 GeneID:2819986
GeneID:2851964 KEGG:ban:BA_1177 KEGG:bar:GBAA_1177 KEGG:bat:BAS1090
HOGENOM:HOG000218209 ProtClustDB:CLSK916118
BioCyc:BANT260799:GJAJ-1166-MONOMER
BioCyc:BANT261594:GJ7F-1219-MONOMER Uniprot:Q81TT4
Length = 866
Score = 2329 (824.9 bits), Expect = 1.2e-241, P = 1.2e-241
Identities = 462/847 (54%), Positives = 622/847 (73%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+ T K E I+ A A ++ Q V+T HL+ LLE++DGLA RI K D + Q
Sbjct: 5 QMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGV 64
Query: 156 EDFISKQPKVTG--ATSGPI-VGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRF 212
E+ I K+P VTG A +G + + LL A + ++++DD++SVEH+LLAF +
Sbjct: 65 ENLIKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFTEEKGD 124
Query: 213 GRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVI 272
LF + + +L ++ VRG+QRVT QNPE Y+ALEKYG DL ++GK+DPVI
Sbjct: 125 ISQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEATYEALEKYGRDLVAEVKAGKIDPVI 184
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLD 332
GRD EIRR I+ILSR+TKNNPV+IGEPGVGKTAI EGLAQRIV+ DVPE L++R + +LD
Sbjct: 185 GRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTIFALD 244
Query: 333 MASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKP 392
M++LVAG +RG+FE+RL+AVL E+ KS G+I+LFIDELHTI+GAG GAMDA NMLKP
Sbjct: 245 MSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKP 304
Query: 393 MLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHH 452
ML RGEL CIGATTL+EYR YIEKDPALERRFQQV ++P+VE+TISILRGL+ER+E++H
Sbjct: 305 MLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYH 364
Query: 453 GVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLK 512
GV I RYI++RFLPDKAIDLVDEA A ++ EI S P ELDE+ R +++
Sbjct: 365 GVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTELDEVTRRIMQ 424
Query: 513 LEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDR 572
LE+E+ +L + D S+ERL L+ +L+ LK+ + +W +EK+ + ++R ++E ++R
Sbjct: 425 LEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHKVRDLREHLER 484
Query: 573 VNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIA 632
+ E+E AE +YDLNRAAEL++G + +++++L+EAE+ + K + LLREEV++ +IA
Sbjct: 485 LRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEE-MGANNKQENRLLREEVSEEEIA 543
Query: 633 EIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARP 692
+IVS+WTGIP++ L + EREKL+ LE++L +RVIGQ+ AV V+DA+ R+RAG+ DP RP
Sbjct: 544 DIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRP 603
Query: 693 IASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYE 752
I SF+F+GPTGVGKTEL K LA LF++E ++RIDMSEYMEKH+VSRL+GAPPGYVGYE
Sbjct: 604 IGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYE 663
Query: 753 EGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMT 812
EGGQLTE VRR+PYSV+L DEIEKAH +VFNILLQ+LDDGRITDSQGRTV F N V+IMT
Sbjct: 664 EGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMT 723
Query: 813 SNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEI 872
SNIGS ++L+ L+ KE E++ Q+ R FRPEFLNR+DE I+F+PL + EI
Sbjct: 724 SNIGSAHLLDGLEEDGSIKEESRELVMGQL----RGHFRPEFLNRVDEIILFKPLTTNEI 779
Query: 873 SKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAV 932
IV+ + ++ RL + I + T+ A + GFDP +GARP+KR +Q+ VE ++A
Sbjct: 780 KGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLAR 839
Query: 933 AILKGDI 939
++ G I
Sbjct: 840 ELIAGTI 846
>GENEDB_PFALCIPARUM|PF08_0063 [details] [associations]
symbol:PF08_0063 "ClpB protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0019538 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
OMA:LIQDRFG GO:GO:0020011 EMBL:AL844507 RefSeq:XP_001349358.1
PDB:2P65 PDBsum:2P65 ProteinModelPortal:Q8IB03 SMR:Q8IB03
PRIDE:Q8IB03 EnsemblProtists:PF08_0063:mRNA GeneID:2655262
KEGG:pfa:PF08_0063 EuPathDB:PlasmoDB:PF3D7_0816600
ProtClustDB:CLSZ2433340 EvolutionaryTrace:Q8IB03 Uniprot:Q8IB03
Length = 1070
Score = 1259 (448.2 bits), Expect = 3.3e-241, Sum P(3) = 3.3e-241
Identities = 244/439 (55%), Positives = 331/439 (75%)
Query: 92 ITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALL-EQKDGLARRILTKAGQDNTK 150
I ++TEKAWE I + VE E L+ ALL + DGLA RIL ++G D
Sbjct: 151 INSDDYTEKAWEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQL 210
Query: 151 VLQATEDFISKQPKV-TGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSD 209
++Q +D++ KQPK+ +G I+G +LS ++R+KKE D+++S+EHLLL+ +S+
Sbjct: 211 LVQEIDDYLKKQPKMPSGFGEQKILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISE 270
Query: 210 D-RFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKL 268
D +F R +N + +K AV+ +RG ++VT + PE YQALEKY DLT LAR+GKL
Sbjct: 271 DSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVTSKTPEMTYQALEKYSRDLTALARAGKL 330
Query: 269 DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKL 328
DPVIGRD+EIRR IQILSRRTKNNP+++G+PGVGKTAI EGLA +IV+GDVP++L+ RKL
Sbjct: 331 DPVIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKL 390
Query: 329 ISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQS-GAMDAS 387
+SLDM+SL+AG YRGDFE+RLK++LKEV + GQ+++FIDE+HT++GAG + GA+DA
Sbjct: 391 VSLDMSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAG 450
Query: 388 NMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRER 447
N+LKPML RGELRCIGATT++EYR +IEKD ALERRFQQ+ +QPSV+ TISILRGL+ER
Sbjct: 451 NILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISILRGLKER 510
Query: 448 YELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEID 507
YE+HHGV+I RYI+ RFLPDKAIDL+DEAA+ LK++++SKPI+L+ I+
Sbjct: 511 YEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPIQLENIE 570
Query: 508 RAVLKLEMEKLSLKNDTDK 526
+ +++LEMEK+S+ D K
Sbjct: 571 KQLIQLEMEKISILGDKQK 589
Score = 1064 (379.6 bits), Expect = 3.3e-241, Sum P(3) = 3.3e-241
Identities = 206/417 (49%), Positives = 303/417 (72%)
Query: 520 LKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEA 579
LK ++ +RL ++ ++ L+++Q+++ D WS EK + IR+IKE ID V +E+E
Sbjct: 636 LKKRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIEK 695
Query: 580 AERDYDLNRAAELKYGTMISLQRQLEEAEKN-LSEFQKSGHSLLREEVTDLDIAEIVSKW 638
AER +DLNRAAEL++ T+ L++QL++AE+N L++ + +L++EVT DI IVS
Sbjct: 696 AERYFDLNRAAELRFETLPDLEKQLKKAEENYLNDIPEKSR-ILKDEVTSEDIVNIVSMS 754
Query: 639 TGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMF 698
TGI L+ L +SE+EK++ LE LHK++IGQD AVK V A++RSR G+++P RPIAS MF
Sbjct: 755 TGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRVGMNNPKRPIASLMF 814
Query: 699 MGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLT 758
+GPTGVGKTEL K LAD LF+T A++ DMSEYMEKHS+S+L+GA PGYVGYE+GG LT
Sbjct: 815 LGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQGGLLT 874
Query: 759 EVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSH 818
+ VR++PYS++LFDEIEKAH DV+N+LL+++D+G+++D++G +F N ++I TSN+GS
Sbjct: 875 DAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSNLGSQ 934
Query: 819 YILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEI 878
IL+ L + + KE + K+QV++ R+TFRPEF NRID++++F L KE+ +I I
Sbjct: 935 SILD-LANDPNKKEKI----KEQVMKSVRETFRPEFYNRIDDHVIFDSLSKKELKEIANI 989
Query: 879 QMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAIL 935
++ +V +RL K + + + +DP+FGARP+KRVIQ +E EIAV IL
Sbjct: 990 EIRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETEIAVRIL 1046
Score = 63 (27.2 bits), Expect = 9.7e-133, Sum P(2) = 9.7e-133
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 504 DEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKE--LNDQWSREKDLMS 561
+ ID V+K+E+EK D ++A++ R L DL +K +E LND + + L
Sbjct: 684 ERID--VVKIEIEKAERYFDLNRAAELRFETLP-DLEKQLKKAEENYLNDIPEKSRILKD 740
Query: 562 RIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ S E+I + + M R LN+ + + +++L+ +L +
Sbjct: 741 EVTS--EDIVNI-VSMSTGIR---LNKLLKSEKEKILNLENELHK 779
Score = 42 (19.8 bits), Expect = 3.3e-241, Sum P(3) = 3.3e-241
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 503 LDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHD-LNSLKQKQKEL 549
+D ID A L+++ S + K+ L +LE + ++ L KQK L
Sbjct: 545 IDLIDEAASNLKIQLSSKPIQLENIEKQ-LIQLEMEKISILGDKQKNL 591
Score = 37 (18.1 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 589 AAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDL 629
A+ LK + S QLE EK L + + S+L ++ +L
Sbjct: 552 ASNLKI-QLSSKPIQLENIEKQLIQLEMEKISILGDKQKNL 591
>UNIPROTKB|Q8IB03 [details] [associations]
symbol:PF08_0063 "ClpB protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
GO:GO:0019538 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
OMA:LIQDRFG GO:GO:0020011 EMBL:AL844507 RefSeq:XP_001349358.1
PDB:2P65 PDBsum:2P65 ProteinModelPortal:Q8IB03 SMR:Q8IB03
PRIDE:Q8IB03 EnsemblProtists:PF08_0063:mRNA GeneID:2655262
KEGG:pfa:PF08_0063 EuPathDB:PlasmoDB:PF3D7_0816600
ProtClustDB:CLSZ2433340 EvolutionaryTrace:Q8IB03 Uniprot:Q8IB03
Length = 1070
Score = 1259 (448.2 bits), Expect = 3.3e-241, Sum P(3) = 3.3e-241
Identities = 244/439 (55%), Positives = 331/439 (75%)
Query: 92 ITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALL-EQKDGLARRILTKAGQDNTK 150
I ++TEKAWE I + VE E L+ ALL + DGLA RIL ++G D
Sbjct: 151 INSDDYTEKAWEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQL 210
Query: 151 VLQATEDFISKQPKV-TGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSD 209
++Q +D++ KQPK+ +G I+G +LS ++R+KKE D+++S+EHLLL+ +S+
Sbjct: 211 LVQEIDDYLKKQPKMPSGFGEQKILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISE 270
Query: 210 D-RFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKL 268
D +F R +N + +K AV+ +RG ++VT + PE YQALEKY DLT LAR+GKL
Sbjct: 271 DSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVTSKTPEMTYQALEKYSRDLTALARAGKL 330
Query: 269 DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKL 328
DPVIGRD+EIRR IQILSRRTKNNP+++G+PGVGKTAI EGLA +IV+GDVP++L+ RKL
Sbjct: 331 DPVIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKL 390
Query: 329 ISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQS-GAMDAS 387
+SLDM+SL+AG YRGDFE+RLK++LKEV + GQ+++FIDE+HT++GAG + GA+DA
Sbjct: 391 VSLDMSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAG 450
Query: 388 NMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRER 447
N+LKPML RGELRCIGATT++EYR +IEKD ALERRFQQ+ +QPSV+ TISILRGL+ER
Sbjct: 451 NILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISILRGLKER 510
Query: 448 YELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEID 507
YE+HHGV+I RYI+ RFLPDKAIDL+DEAA+ LK++++SKPI+L+ I+
Sbjct: 511 YEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPIQLENIE 570
Query: 508 RAVLKLEMEKLSLKNDTDK 526
+ +++LEMEK+S+ D K
Sbjct: 571 KQLIQLEMEKISILGDKQK 589
Score = 1064 (379.6 bits), Expect = 3.3e-241, Sum P(3) = 3.3e-241
Identities = 206/417 (49%), Positives = 303/417 (72%)
Query: 520 LKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEA 579
LK ++ +RL ++ ++ L+++Q+++ D WS EK + IR+IKE ID V +E+E
Sbjct: 636 LKKRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIEK 695
Query: 580 AERDYDLNRAAELKYGTMISLQRQLEEAEKN-LSEFQKSGHSLLREEVTDLDIAEIVSKW 638
AER +DLNRAAEL++ T+ L++QL++AE+N L++ + +L++EVT DI IVS
Sbjct: 696 AERYFDLNRAAELRFETLPDLEKQLKKAEENYLNDIPEKSR-ILKDEVTSEDIVNIVSMS 754
Query: 639 TGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMF 698
TGI L+ L +SE+EK++ LE LHK++IGQD AVK V A++RSR G+++P RPIAS MF
Sbjct: 755 TGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRVGMNNPKRPIASLMF 814
Query: 699 MGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLT 758
+GPTGVGKTEL K LAD LF+T A++ DMSEYMEKHS+S+L+GA PGYVGYE+GG LT
Sbjct: 815 LGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQGGLLT 874
Query: 759 EVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSH 818
+ VR++PYS++LFDEIEKAH DV+N+LL+++D+G+++D++G +F N ++I TSN+GS
Sbjct: 875 DAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSNLGSQ 934
Query: 819 YILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEI 878
IL+ L + + KE + K+QV++ R+TFRPEF NRID++++F L KE+ +I I
Sbjct: 935 SILD-LANDPNKKEKI----KEQVMKSVRETFRPEFYNRIDDHVIFDSLSKKELKEIANI 989
Query: 879 QMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAIL 935
++ +V +RL K + + + +DP+FGARP+KRVIQ +E EIAV IL
Sbjct: 990 EIRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETEIAVRIL 1046
Score = 63 (27.2 bits), Expect = 9.7e-133, Sum P(2) = 9.7e-133
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 504 DEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKE--LNDQWSREKDLMS 561
+ ID V+K+E+EK D ++A++ R L DL +K +E LND + + L
Sbjct: 684 ERID--VVKIEIEKAERYFDLNRAAELRFETLP-DLEKQLKKAEENYLNDIPEKSRILKD 740
Query: 562 RIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ S E+I + + M R LN+ + + +++L+ +L +
Sbjct: 741 EVTS--EDIVNI-VSMSTGIR---LNKLLKSEKEKILNLENELHK 779
Score = 42 (19.8 bits), Expect = 3.3e-241, Sum P(3) = 3.3e-241
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 503 LDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHD-LNSLKQKQKEL 549
+D ID A L+++ S + K+ L +LE + ++ L KQK L
Sbjct: 545 IDLIDEAASNLKIQLSSKPIQLENIEKQ-LIQLEMEKISILGDKQKNL 591
Score = 37 (18.1 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 589 AAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDL 629
A+ LK + S QLE EK L + + S+L ++ +L
Sbjct: 552 ASNLKI-QLSSKPIQLENIEKQLIQLEMEKISILGDKQKNL 591
>UNIPROTKB|Q9KU18 [details] [associations]
symbol:clpB "Chaperone protein ClpB" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR017730
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006508 GO:GO:0009408 GO:GO:0017111 GO:GO:0008233
GO:GO:0016485 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03695
TIGRFAMs:TIGR03346 OMA:LIQDRFG PIR:A82290 RefSeq:NP_230360.1
ProteinModelPortal:Q9KU18 SMR:Q9KU18 PRIDE:Q9KU18 DNASU:2615715
GeneID:2615715 KEGG:vch:VC0711 PATRIC:20080535
ProtClustDB:CLSK874082 Uniprot:Q9KU18
Length = 857
Score = 2249 (796.7 bits), Expect = 3.5e-233, P = 3.5e-233
Identities = 455/842 (54%), Positives = 604/842 (71%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATE 156
FT K I A A + Q +E HLM ALL+Q R +LT D ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKLG 65
Query: 157 DFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR-FGRL 215
+ + + PKV+G + S G L + ++ ++ +D ++S E LLA + D G L
Sbjct: 66 EMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKGPLGHL 125
Query: 216 LFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRD 275
L + L EK + +A++ +RG Q+V D N E QALEK+ DLTE A GKLDPVIGRD
Sbjct: 126 L-KEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRD 184
Query: 276 DEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMAS 335
DEIRR IQ+L RRTKNNPVIIGEPGVGKTAI EGLAQRI+ +VPE L+ R+++SLDM +
Sbjct: 185 DEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGA 244
Query: 336 LVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLG 395
LVAG YRG+FE+RLK+VL E+ K G IILFIDELHT++GAG G+MDA NMLKP L
Sbjct: 245 LVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALA 304
Query: 396 RGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVK 455
RGEL C+GATTL+EYR YIEKDPALERRFQ+V D+P+VE+TI+ILRGL+ERYELHH V+
Sbjct: 305 RGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVE 364
Query: 456 IXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEM 515
I RYI++R LPDKAIDL+DEAA+ ++M+I SKP LD+++R +++L++
Sbjct: 365 ITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKI 424
Query: 516 EKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNL 575
E+ +L N+ D+AS++RL+ L +L ++ EL + W EK +S + IK +++ +
Sbjct: 425 EQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARM 484
Query: 576 EMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIV 635
++E A R DLNR +EL+YG + L++QL+ A + +E Q+ +LLR +VTD +IAE++
Sbjct: 485 DLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQ--AEMQEM--TLLRNKVTDAEIAEVL 540
Query: 636 SKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIAS 695
SK TGIP+S + ++E+EKL+ +E+VLHKRVIGQ AV+ VA+AIRRSRAGLSDP RPI S
Sbjct: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
Query: 696 FMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGG 755
F+F+GPTGVGKTEL K LA+FLF++E+A+VR+DMSE+MEKHSV+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
Query: 756 QLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNI 815
LTE VRR+PYSV+L DE+EKAH DVFNILLQ+LDDGR+TD QGRTV F N VVIMTSN+
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
Query: 816 GSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKI 875
GS I E + Y+ +K+QV+++ + FRPEFLNR+DE +VF PL + I I
Sbjct: 721 GSSRIQENFARLD------YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSI 774
Query: 876 VEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAIL 935
IQ+ R++ RL ++ L EA+ L+ +GFDP +GARP+KR IQQ VEN +A +IL
Sbjct: 775 ASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSIL 834
Query: 936 KG 937
G
Sbjct: 835 AG 836
>TIGR_CMR|VC_0711 [details] [associations]
symbol:VC_0711 "clpB protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0009408 GO:GO:0017111 GO:GO:0008233 GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03695
TIGRFAMs:TIGR03346 OMA:LIQDRFG PIR:A82290 RefSeq:NP_230360.1
ProteinModelPortal:Q9KU18 SMR:Q9KU18 PRIDE:Q9KU18 DNASU:2615715
GeneID:2615715 KEGG:vch:VC0711 PATRIC:20080535
ProtClustDB:CLSK874082 Uniprot:Q9KU18
Length = 857
Score = 2249 (796.7 bits), Expect = 3.5e-233, P = 3.5e-233
Identities = 455/842 (54%), Positives = 604/842 (71%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATE 156
FT K I A A + Q +E HLM ALL+Q R +LT D ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKLG 65
Query: 157 DFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR-FGRL 215
+ + + PKV+G + S G L + ++ ++ +D ++S E LLA + D G L
Sbjct: 66 EMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKGPLGHL 125
Query: 216 LFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRD 275
L + L EK + +A++ +RG Q+V D N E QALEK+ DLTE A GKLDPVIGRD
Sbjct: 126 L-KEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRD 184
Query: 276 DEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMAS 335
DEIRR IQ+L RRTKNNPVIIGEPGVGKTAI EGLAQRI+ +VPE L+ R+++SLDM +
Sbjct: 185 DEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGA 244
Query: 336 LVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLG 395
LVAG YRG+FE+RLK+VL E+ K G IILFIDELHT++GAG G+MDA NMLKP L
Sbjct: 245 LVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALA 304
Query: 396 RGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVK 455
RGEL C+GATTL+EYR YIEKDPALERRFQ+V D+P+VE+TI+ILRGL+ERYELHH V+
Sbjct: 305 RGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVE 364
Query: 456 IXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEM 515
I RYI++R LPDKAIDL+DEAA+ ++M+I SKP LD+++R +++L++
Sbjct: 365 ITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKI 424
Query: 516 EKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNL 575
E+ +L N+ D+AS++RL+ L +L ++ EL + W EK +S + IK +++ +
Sbjct: 425 EQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARM 484
Query: 576 EMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIV 635
++E A R DLNR +EL+YG + L++QL+ A + +E Q+ +LLR +VTD +IAE++
Sbjct: 485 DLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQ--AEMQEM--TLLRNKVTDAEIAEVL 540
Query: 636 SKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIAS 695
SK TGIP+S + ++E+EKL+ +E+VLHKRVIGQ AV+ VA+AIRRSRAGLSDP RPI S
Sbjct: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
Query: 696 FMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGG 755
F+F+GPTGVGKTEL K LA+FLF++E+A+VR+DMSE+MEKHSV+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
Query: 756 QLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNI 815
LTE VRR+PYSV+L DE+EKAH DVFNILLQ+LDDGR+TD QGRTV F N VVIMTSN+
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
Query: 816 GSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKI 875
GS I E + Y+ +K+QV+++ + FRPEFLNR+DE +VF PL + I I
Sbjct: 721 GSSRIQENFARLD------YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSI 774
Query: 876 VEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAIL 935
IQ+ R++ RL ++ L EA+ L+ +GFDP +GARP+KR IQQ VEN +A +IL
Sbjct: 775 ASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSIL 834
Query: 936 KG 937
G
Sbjct: 835 AG 836
>UNIPROTKB|P63288 [details] [associations]
symbol:clpB "Chaperone protein ClpB" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR017730 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842573 GO:GO:0009408 GO:GO:0017111
GO:GO:0016485 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03695
TIGRFAMs:TIGR03346 HOGENOM:HOG000218209 PIR:C70834
RefSeq:NP_214898.1 RefSeq:NP_334805.1 RefSeq:YP_006513710.1
ProteinModelPortal:P63288 SMR:P63288 PhosSite:P12071707
PRIDE:P63288 EnsemblBacteria:EBMYCT00000000870
EnsemblBacteria:EBMYCT00000071391 GeneID:13318251 GeneID:886440
GeneID:923618 KEGG:mtc:MT0397 KEGG:mtu:Rv0384c KEGG:mtv:RVBD_0384c
PATRIC:18122586 TubercuList:Rv0384c OMA:MAFKPEF
ProtClustDB:CLSK790482 Uniprot:P63288
Length = 848
Score = 2044 (724.6 bits), Expect = 1.1e-231, Sum P(2) = 1.1e-231
Identities = 418/802 (52%), Positives = 561/802 (69%)
Query: 98 TEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATED 157
T K + A+ AA + HL+ ALL Q DG+A +L G + V T+
Sbjct: 7 TTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQR 66
Query: 158 FISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLF 217
+ + P+ TGA++ P + ++ AQ++ E++D++VS EH+++ + D L
Sbjct: 67 LLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAKLL 126
Query: 218 NDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDE 277
+ + L++A VRG RVT PE YQAL+KY DLT AR GKLDPVIGRD+E
Sbjct: 127 TGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGRDNE 186
Query: 278 IRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLV 337
IRR +Q+LSRRTKNNPV+IGEPGVGKTAI EGLAQRIV GDVPE+L+++ +++LD+ S+V
Sbjct: 187 IRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMV 246
Query: 338 AGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAG-NQSGAMDASNMLKPMLGR 396
AG+ YRG+FE+RLKAVL ++ S GQII FIDELHTI+GAG GAMDA NM+KPML R
Sbjct: 247 AGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLAR 306
Query: 397 GELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKI 456
GELR +GATTL+EYR +IEKD ALERRFQQV+ +PSVE+TI ILRGL++RYE+HHGV+I
Sbjct: 307 GELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRI 366
Query: 457 XXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEME 516
RYIT RFLPDKAIDLVDEAA++L+MEI S+P+E+DE++R V +LE+E
Sbjct: 367 TDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIE 426
Query: 517 KLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLE 576
+++L + D+AS ERL+KL +L K+K EL +W EK+ + +R +KE+++ + E
Sbjct: 427 EMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEALRGE 486
Query: 577 MEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVS 636
E AERD DL +AAEL+YG + ++++L+ A L + Q +L+EEV DIA++VS
Sbjct: 487 SERAERDGDLAKAAELRYGRIPEVEKKLDAA---LPQAQAREQVMLKEEVGPDDIADVVS 543
Query: 637 KWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASF 696
WTGIP L + E KL+ +E+ L KRVIGQ AV +V+DA+RRSRAG+SDP RP +F
Sbjct: 544 AWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAF 603
Query: 697 MFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQ 756
MF+GPTGVGKTEL KALADFLF+ E A+VRIDMSEY EKH+V+RL+GAPPGYVGYE GGQ
Sbjct: 604 MFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQ 663
Query: 757 LTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIG 816
LTE VRRRPY+VVLFDEIEKAH DVF++LLQ+LD+GR+TD GRTV F N ++I+TSN+G
Sbjct: 664 LTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLG 723
Query: 817 SHYILE-TLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKI 875
S E L +V+ + + E + + L + PE L RI + + Q L + +
Sbjct: 724 SGGSAEQVLAAVRATFKP--EFINRLDDVLIFEGLNPEELVRIVDIQLAQ-LGKRLAQRR 780
Query: 876 VEIQMNRVKDR-LKQKKIDLHY 896
+++Q++ R L Q+ D Y
Sbjct: 781 LQLQVSLPAKRWLAQRGFDPVY 802
Score = 214 (80.4 bits), Expect = 1.1e-231, Sum P(2) = 1.1e-231
Identities = 38/100 (38%), Positives = 70/100 (70%)
Query: 840 KQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKE 899
+QV+ R TF+PEF+NR+D+ ++F+ L+ +E+ +IV+IQ+ ++ RL Q+++ L +
Sbjct: 729 EQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLP 788
Query: 900 AVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
A L GFDP +GARP++R++QQ + +++A +L G +
Sbjct: 789 AKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQV 828
Score = 47 (21.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 87 TGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAG 145
TG S T + + ++ I A A + + V TEH+M L +A+ +LT G
Sbjct: 75 TGAS--TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAK-LLTGHG 130
>TIGR_CMR|CBU_0094 [details] [associations]
symbol:CBU_0094 "clpB protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0009408 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 GO:GO:0016485 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HOGENOM:HOG000218211 KO:K03695 TIGRFAMs:TIGR03346
RefSeq:NP_819146.1 ProteinModelPortal:Q83F55 SMR:Q83F55
PRIDE:Q83F55 GeneID:1207964 KEGG:cbu:CBU_0094 PATRIC:17928865
OMA:KNSLENM ProtClustDB:CLSK913830
BioCyc:CBUR227377:GJ7S-94-MONOMER Uniprot:Q83F55
Length = 859
Score = 2233 (791.1 bits), Expect = 1.7e-231, P = 1.7e-231
Identities = 445/843 (52%), Positives = 607/843 (72%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+FT + A A + Q +E H+MK LLEQ G +L ++ + ++++
Sbjct: 5 KFTTAFQTALADAQSLAVGRDHQFIEPAHVMKVLLEQTQGTVAPLLEQSKVNLSRLIDGV 64
Query: 156 EDFISKQPKVTGATSGPI-VGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGR 214
I P+V G T G + V +L+ + ++ +D ++S E + A L R
Sbjct: 65 NKAIDSYPQVEG-TGGEVHVSRELSKILTLMDKFAQQNKDQYISSEWFIPAALEAKGQLR 123
Query: 215 LLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGR 274
+ + ++K ++ + +R +RVT+Q+ E + QAL KY DLTE A +GKLDPVIGR
Sbjct: 124 DVLIEAGADKKAIEKNIMNLRKGERVTEQSAEDQRQALAKYTIDLTEKAETGKLDPVIGR 183
Query: 275 DDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMA 334
D+EIRR +Q+L RRTKNNPV+IGEPGVGKTAI EGLAQRIV G+VPE L+ ++L++LDM
Sbjct: 184 DEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMG 243
Query: 335 SLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPML 394
+L+AG +RG+FE+RLKAVLK++ K G++ILFIDELHT++GAG GAMDA NMLKP L
Sbjct: 244 ALIAGAKFRGEFEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPAL 303
Query: 395 GRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGV 454
RGEL C+GATTL+EYR YIEKD ALERRFQ+V ++PS E+ I+ILRGL+ERYE+HHGV
Sbjct: 304 ARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGV 363
Query: 455 KIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLE 514
+I RYIT+R LPDKAIDL+DEAA++++ME+ SKP+ELD ++R +++L+
Sbjct: 364 EITDPAIIAAATLSQRYITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLK 423
Query: 515 MEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVN 574
+E+ +LK +TD+ASK+RLS LE ++ +++++ +L + W EK + + IKEE+++
Sbjct: 424 IEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQAR 483
Query: 575 LEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEI 634
+E+EAA R DL R +EL+YG + L ++L+ A + +F H LLR VT+ ++AE+
Sbjct: 484 IELEAAGRAGDLARMSELQYGIIPELDKKLKAASQKEEQFHD--HKLLRSRVTEEEVAEV 541
Query: 635 VSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIA 694
VSKWT IP+S + + EREKL+ +E LHKRVIGQD AV +VA+AIRRSRAGLSDP RP+
Sbjct: 542 VSKWTHIPVSKMLEGEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVG 601
Query: 695 SFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEG 754
SF+F+GPTGVGKTEL KALA FLF+TE+A+VRIDMSE+MEKHSV+RL+GAPPGYVGYEEG
Sbjct: 602 SFLFLGPTGVGKTELCKALAVFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEG 661
Query: 755 GQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSN 814
G LTE +RRRPYSV+L DEIEKAH DVFN+LLQ+LDDGR+TD QGRTV F N V++MTSN
Sbjct: 662 GYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSN 721
Query: 815 IGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISK 874
+GS I E S E Y+ MK V+E+ Q FRPEF+NRIDE +VF L ++I
Sbjct: 722 LGSDLIREF------SGEN-YDKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRN 774
Query: 875 IVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAI 934
I IQ++R+K RLK+K L + +A+ L LG+DP +GARP+KRV+QQ +EN ++ I
Sbjct: 775 IAIIQIDRIKKRLKEKDYQLTISDDALDYLSELGYDPVYGARPLKRVLQQQLENPLSQKI 834
Query: 935 LKG 937
L+G
Sbjct: 835 LEG 837
>TIGR_CMR|CPS_3913 [details] [associations]
symbol:CPS_3913 "ATP-dependent chaperone protein ClpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0042026 "protein refolding"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR017730 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0009408
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111 GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 TIGRFAMs:TIGR03346 RefSeq:YP_270571.1
ProteinModelPortal:Q47X99 SMR:Q47X99 STRING:Q47X99 GeneID:3521723
KEGG:cps:CPS_3913 PATRIC:21470717 OMA:FISSEMF
BioCyc:CPSY167879:GI48-3926-MONOMER Uniprot:Q47X99
Length = 861
Score = 2226 (788.7 bits), Expect = 9.6e-231, P = 9.6e-231
Identities = 446/840 (53%), Positives = 611/840 (72%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATE 156
FT+ E I A A + Q +E HLM ALL Q +L AG D + Q +
Sbjct: 6 FTQSFQESIADAQSLALGKDHQFIEPVHLMMALLNQNGNSIIALLKSAGIDVRSLRQKLD 65
Query: 157 DFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR-FGRL 215
+ +S +V + + + G +L+ + ++M D F+S E LLA + D G++
Sbjct: 66 EALSSLAQVQDSAGDVQLSAASGRILNLCDKHAQKMSDKFISSEMFLLAVIDDKGPLGQI 125
Query: 216 LFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRD 275
L ++ N++ +K A+ VRG + V DQN E QAL KY DLTELA GKLDPVIGRD
Sbjct: 126 LA-ELGANQQRIKSAIDHVRGGENVDDQNAEDVRQALNKYTVDLTELAEHGKLDPVIGRD 184
Query: 276 DEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMAS 335
DEIRR +Q+L RRTKNNPV+IG+PGVGKTAI EGLAQRIV +VPE L+N++++SLDM S
Sbjct: 185 DEIRRTLQVLQRRTKNNPVLIGQPGVGKTAIVEGLAQRIVNNEVPEGLKNKRVLSLDMGS 244
Query: 336 LVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLG 395
LVAG YRG+FE+RLKAVL E++K GQ+ILFIDELHT++GAG GAMDA NMLKP L
Sbjct: 245 LVAGAKYRGEFEERLKAVLNELSKEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALA 304
Query: 396 RGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVK 455
RG+L C+GATTL+EYR YIEKD ALERRFQ+V ++PSVE+TI+ILRGL+ERYELHH V
Sbjct: 305 RGDLHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVN 364
Query: 456 IXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEM 515
I RYI++R LPDKAIDL+DEAA+ +++++ SKP +LD ++R +++L++
Sbjct: 365 ITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRLQMDSKPEDLDRLERRLIQLKL 424
Query: 516 EKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNL 575
E+ +L+ D D+A+ +RL+ + ++ ++K EL++ W+ EK + +IKEE+++ +
Sbjct: 425 EQRALEKDEDEATIKRLAIISQQISEKQKKYDELDEVWTTEKAALYGAHTIKEELEQARI 484
Query: 576 EMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIV 635
E+EAA R DLNR +EL+YG + L++QL+ A + +E Q+ +LL +VT+++IA+++
Sbjct: 485 ELEAARRTGDLNRMSELQYGKLPELEKQLDLASQ--AEMQEM--TLLANKVTEVEIADVL 540
Query: 636 SKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIAS 695
S+ TGIP++ + + ER+KL+ +E+ LH+ VIGQ AV SV++AIRRSRAGLSDP +PI S
Sbjct: 541 SRATGIPVAKMLEQERDKLLHMEDNLHQNVIGQHEAVTSVSNAIRRSRAGLSDPNQPIGS 600
Query: 696 FMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGG 755
F+F+GPTGVGKTEL KALA+FLF++++AL+R+DMSE+MEKHSV+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELTKALAEFLFDSQDALIRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
Query: 756 QLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNI 815
LTE VRR+PYSV+L DEIEKAH DVFNILLQ+LDDGR+TD QGRTV F N V+IMTSNI
Sbjct: 661 YLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNI 720
Query: 816 GSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKI 875
GS I E + E+ Y MK++V+ Q F+PEF+NR+DE +VF PL +++I KI
Sbjct: 721 GSDIIQEL------AGESQYHQMKEEVMNTLGQHFKPEFINRVDESVVFHPLVAEQIKKI 774
Query: 876 VEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAIL 935
+IQ+ + DRL +++++L +EA++L+ GFDP FGARP+KR IQQ VEN +A IL
Sbjct: 775 AKIQIEALADRLIEQELNLTINEEALSLISAAGFDPIFGARPLKRAIQQGVENPLAQKIL 834
>UNIPROTKB|P63284 [details] [associations]
symbol:clpB "ClpB chaperone" species:83333 "Escherichia
coli K-12" [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0019538 "protein metabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0009408 "response to heat"
evidence=IEA] [GO:0006986 "response to unfolded protein"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR017730 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0009408
GO:GO:0017111 GO:GO:0016485 GO:GO:0006986 eggNOG:COG0542
Gene3D:1.10.1780.10 InterPro:IPR023150 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211 KO:K03695
TIGRFAMs:TIGR03346 OMA:LIQDRFG EMBL:M29364 EMBL:X57620 EMBL:V00350
EMBL:U50134 PIR:C65037 RefSeq:NP_417083.1 RefSeq:YP_490816.1
PDB:1JBK PDB:1KHY PDBsum:1JBK PDBsum:1KHY ProteinModelPortal:P63284
SMR:P63284 DIP:DIP-35844N IntAct:P63284 MINT:MINT-1222117
SWISS-2DPAGE:P63284 PaxDb:P63284 PRIDE:P63284
EnsemblBacteria:EBESCT00000003110 EnsemblBacteria:EBESCT00000014730
GeneID:12931624 GeneID:947077 KEGG:ecj:Y75_p2541 KEGG:eco:b2592
PATRIC:32120587 EchoBASE:EB0155 EcoGene:EG10157
ProtClustDB:PRK10865 BioCyc:EcoCyc:EG10157-MONOMER
BioCyc:ECOL316407:JW2573-MONOMER EvolutionaryTrace:P63284
Genevestigator:P63284 Uniprot:P63284
Length = 857
Score = 2204 (780.9 bits), Expect = 2.1e-228, P = 2.1e-228
Identities = 446/845 (52%), Positives = 603/845 (71%)
Query: 98 TEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATED 157
T K + A A ++ Q +E HLM ALL Q+ G +LT AG + ++
Sbjct: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66
Query: 158 FISKQPKVTGATSGPIVGS-NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRL- 215
+++ P+V G T G + S + +L+ ++ ++ D+F+S E +LA L + R G L
Sbjct: 67 ALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR-GTLA 123
Query: 216 -LFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGR 274
+ ++ A++ +RG + V DQ E + QAL+KY DLTE A GKLDPVIGR
Sbjct: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183
Query: 275 DDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMA 334
D+EIRR IQ+L RRTKNNPV+IGEPGVGKTAI EGLAQRI+ G+VPE L+ R++++LDM
Sbjct: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243
Query: 335 SLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPML 394
+LVAG YRG+FE+RLK VL ++ K G +ILFIDELHT++GAG GAMDA NMLKP L
Sbjct: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303
Query: 395 GRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGV 454
RGEL C+GATTL+EYR YIEKD ALERRFQ+VF +PSVE+TI+ILRGL+ERYELHH V
Sbjct: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363
Query: 455 KIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLE 514
+I RYI +R LPDKAIDL+DEAA+ ++M+I SKP ELD +DR +++L+
Sbjct: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423
Query: 515 MEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVN 574
+E+ +L ++D+ASK+RL L +L+ +++ EL ++W EK +S ++IK E+++
Sbjct: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483
Query: 575 LEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEI 634
+ +E A R DL R +EL+YG + L++QLE A ++ + LLR +VTD +IAE+
Sbjct: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAA----TQLEGKTMRLLRNKVTDAEIAEV 539
Query: 635 VSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIA 694
+++WTGIP+S + +SEREKL+ +E+ LH RVIGQ+ AV +V++AIRRSRAGL+DP RPI
Sbjct: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599
Query: 695 SFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEG 754
SF+F+GPTGVGKTEL KALA+F+F+++ A+VRIDMSE+MEKHSVSRLVGAPPGYVGYEEG
Sbjct: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659
Query: 755 GQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSN 814
G LTE VRRRPYSV+L DE+EKAH DVFNILLQ+LDDGR+TD QGRTV F N VVIMTSN
Sbjct: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719
Query: 815 IGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISK 874
+GS I E + Y MK+ V+ + FRPEF+NRIDE +VF PL + I+
Sbjct: 720 LGSDLIQERFGELD------YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773
Query: 875 IVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAI 934
I +IQ+ R+ RL+++ ++H + EA+ LL G+DP +GARP+KR IQQ +EN +A I
Sbjct: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833
Query: 935 LKGDI 939
L G++
Sbjct: 834 LSGEL 838
>TIGR_CMR|SO_3577 [details] [associations]
symbol:SO_3577 "clpB protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0004176 "ATP-dependent peptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR017730
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0009408 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 TIGRFAMs:TIGR03346 OMA:LIQDRFG RefSeq:NP_719122.1
ProteinModelPortal:Q8EBE6 SMR:Q8EBE6 PRIDE:Q8EBE6 GeneID:1171246
KEGG:son:SO_3577 PATRIC:23526850 ProtClustDB:CLSK907239
Uniprot:Q8EBE6
Length = 857
Score = 2202 (780.2 bits), Expect = 3.4e-228, P = 3.4e-228
Identities = 450/845 (53%), Positives = 601/845 (71%)
Query: 98 TEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATED 157
T K I A A + Q +E HLM ALL Q G +LT+AG + +
Sbjct: 7 TNKFQLAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHPLLTQAGIRVSALRSLLSQ 66
Query: 158 FISKQPKVTGATSGPIVGSNFGL--LLSNAQRIKKEMEDDFVSVEHLLLAFLSD-DRFGR 214
+ + P+V G T G + S GL LL+ ++ ++ +D ++S E +LA L D +
Sbjct: 67 ELERLPQVEG-TGGDVQLSQ-GLIRLLNLCDKLAQKRKDKYISSELFVLAALEGCDALAQ 124
Query: 215 LLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGR 274
L E ++ ++ VRG Q+V D N E + QAL+K+ DLTE A GKLDPVIGR
Sbjct: 125 CLKKSGATKEL-MEQTIEQVRGGQKVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGR 183
Query: 275 DDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMA 334
DDEIRR IQ+L RRTKNNPV+IGEPGVGKTAI EGLAQRIV G+VPE ++N++++SLDM
Sbjct: 184 DDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMG 243
Query: 335 SLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPML 394
+L+AG YRG+FE+RLKAVL E+ + GQ+ILFIDELHT++GAG GAMDA NMLKP L
Sbjct: 244 ALIAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPAL 303
Query: 395 GRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGV 454
RG+L C+GATTL+EYR YIEKD ALERRFQ+V D+PSVE+TI+ILRGL+ERYELHH V
Sbjct: 304 ARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHV 363
Query: 455 KIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLE 514
+I RY+++R LPDKAIDL+DEAA+ ++M++ SKP LD ++R ++L+
Sbjct: 364 EITDPAIVAAATMSHRYVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLK 423
Query: 515 MEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVN 574
+E+ +L + D+AS+ RL L+ +L ++ K EL++ W EK ++ + IK ++++
Sbjct: 424 LEEQALAKENDEASRRRLDHLQEELRDVEAKASELSEIWRTEKAALAGTQHIKADLEQAR 483
Query: 575 LEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEI 634
L++E A R DL R +EL+YG + L++QL+ A + +E Q +LLR +VTDL+IAE+
Sbjct: 484 LDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQ--AEMQDM--TLLRNKVTDLEIAEV 539
Query: 635 VSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIA 694
+SK TGIP+S + + EREKL+ +E LH+RVIGQ+ AV +VA+AIRRSRAGL+DP RPI
Sbjct: 540 LSKATGIPVSKMLEGEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIG 599
Query: 695 SFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEG 754
SF+F+GPTGVGKTEL K+LA FLF++E+ALVRIDMSE+MEKH+VSRLVGAPPGYVGYEEG
Sbjct: 600 SFLFLGPTGVGKTELCKSLARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEG 659
Query: 755 GQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSN 814
G LTE VRR+PYSV+L DE+EKAH DVFNILLQ+LDDGR+TD QGRTV F N V+IMTSN
Sbjct: 660 GYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 719
Query: 815 IGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISK 874
+GS I E + Y MK V+ + +FRPEFLNRIDE +VF PLD++ I
Sbjct: 720 LGSDIIQEGFGHLS------YSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKH 773
Query: 875 IVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAI 934
I IQ+ ++ RL +K L T EA++L+ +GFDP +GARP+KR +QQ +EN +A +
Sbjct: 774 IASIQIASLRKRLAEKDYTLEITDEALSLIAEIGFDPVYGARPLKRALQQEMENPLAQKL 833
Query: 935 LKGDI 939
L+GD+
Sbjct: 834 LRGDL 838
>TIGR_CMR|SPO_3276 [details] [associations]
symbol:SPO_3276 "ATP-dependent Clp protease, ATP-binding
subunit ClpB" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR017730
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006508 GO:GO:0009408 GO:GO:0017111 GO:GO:0008233
GO:GO:0016485 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 TIGRFAMs:TIGR03346 RefSeq:YP_168473.1
ProteinModelPortal:Q5LND5 SMR:Q5LND5 GeneID:3195262
KEGG:sil:SPO3276 PATRIC:23379995 OMA:NDIAKEE ProtClustDB:CLSK934115
Uniprot:Q5LND5
Length = 872
Score = 2195 (777.7 bits), Expect = 1.9e-227, P = 1.9e-227
Identities = 438/849 (51%), Positives = 608/849 (71%)
Query: 95 TEFTEKAWEGIVGAVD--AARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVL 152
++FTE+A G V A A R +Q++ EH++KAL++ GLA ++ +AG + +V+
Sbjct: 4 SKFTERA-RGFVQAAQTIALREGHQRLAP-EHILKALMDDDQGLASNLIARAGGASKRVV 61
Query: 153 QATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRF 212
+A + +SK PKV+G + + +L A+++ K+ D FV VE +L+A
Sbjct: 62 EALDVALSKIPKVSGDAAQVYLDGQTVKVLDEAEKVAKKAGDSFVPVERVLMALCMVKSK 121
Query: 213 GRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVI 272
+ + + + L +A+ +R + + E Y AL+KY DLTE A GK+DP+I
Sbjct: 122 AKEALDAGEVTAQKLNEAINDIRKGRTADSASAEEGYDALKKYARDLTEAAAEGKIDPII 181
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLD 332
GRD+EIRR +Q+LSRRTKNNPV+IGEPGVGKTAIAEG+A RIV GDVPE+L+++KL++LD
Sbjct: 182 GRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLRDKKLLALD 241
Query: 333 MASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKP 392
M +L+AG YRG+FE+RLKAVL EVT++ G+IILFIDE+HT++GAG GAMDA+N++KP
Sbjct: 242 MGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKP 301
Query: 393 MLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHH 452
L RGEL CIGATTL+EYR Y+EKD AL RRFQ V ++P+VE+TISILRG++E+YELHH
Sbjct: 302 ALARGELHCIGATTLDEYRKYVEKDAALARRFQPVLVEEPTVEDTISILRGIKEKYELHH 361
Query: 453 GVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLK 512
GV I RYIT+RFLPDKAIDL+DEAA++L+ME+ SKP LD++DR +L+
Sbjct: 362 GVDISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEALDQLDRQILQ 421
Query: 513 LEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDR 572
L++E+ +LK + D AS++RL+ L+ DL L++K E+ QW +D M+ +S+KE+++R
Sbjct: 422 LQIEEEALKKENDAASQDRLATLQKDLAELQEKSAEMTAQWQASRDKMNAAQSVKEQLER 481
Query: 573 VNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLD-I 631
E+E A+R+ +L RA EL YG + L++Q EEAE + +G L EEV + I
Sbjct: 482 ARAELEIAKREGNLARAGELSYGIIPELEKQREEAEAG----EDTG--LKAEEVVRPEQI 535
Query: 632 AEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPAR 691
A +V +WTGIP S + + EREKL+ +E+ LHKRVIGQ AV +VA+A+RR+RAGL+D R
Sbjct: 536 AAVVERWTGIPTSKMLEGEREKLLRMEDELHKRVIGQGTAVTAVANAVRRARAGLNDENR 595
Query: 692 PIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGY 751
P+ SF+F+GPTGVGKTEL KA+A++LF+ +NA+VRIDMSE+MEKH+V+RL+GAPPGYVGY
Sbjct: 596 PLGSFLFLGPTGVGKTELTKAVANYLFDDDNAMVRIDMSEFMEKHAVARLIGAPPGYVGY 655
Query: 752 EEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIM 811
+EGG LTE VRRRPY VVLFDE+EKAH DVFN+LLQ+LDDG +TD QGRTV F ++++
Sbjct: 656 DEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVL 715
Query: 812 TSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKE 871
TSN+GS L L DS +A ++ V++ R FRPEFLNR+DE I+F L +
Sbjct: 716 TSNLGSQ-ALSQLPEGADSAQA-----RRDVMDAVRAHFRPEFLNRLDETIIFDRLKRAD 769
Query: 872 ISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIA 931
+ IV IQ+ R+ RL Q+KI L + A L G+DP +GARP+KRVIQ+ ++N +A
Sbjct: 770 MDGIVTIQLGRLAKRLAQRKIVLELDEPARKWLADAGYDPVYGARPLKRVIQRDLQNPLA 829
Query: 932 VAILKGDIK 940
+L G+IK
Sbjct: 830 EKLLAGEIK 838
>UNIPROTKB|Q889C2 [details] [associations]
symbol:clpB "Chaperone protein ClpB" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0031249 "denatured protein binding" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR017730
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0009408
EMBL:AE016853 GenomeReviews:AE016853_GR GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03695
TIGRFAMs:TIGR03346 HOGENOM:HOG000218209 OMA:MAFKPEF
RefSeq:NP_790675.1 ProteinModelPortal:Q889C2 SMR:Q889C2
PRIDE:Q889C2 GeneID:1182454 KEGG:pst:PSPTO_0829 PATRIC:19992863
ProtClustDB:CLSK868728 BioCyc:PSYR223283:GJIX-841-MONOMER
GO:GO:0031249 Uniprot:Q889C2
Length = 854
Score = 2194 (777.4 bits), Expect = 2.4e-227, P = 2.4e-227
Identities = 437/819 (53%), Positives = 598/819 (73%)
Query: 120 VETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFG 179
+E HLM+ALLEQ+ G + +L + G D + + + + PK+ T + +
Sbjct: 29 IEPAHLMQALLEQQGGSIKPLLLQVGFDINSLRKELSAELDRLPKIQNPTGDVNMSQDLA 88
Query: 180 LLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD-RFGRLLFNDIRLNEKDLKDAVKAVRGHQ 238
LL+ A R+ ++ D F+S E +LLA + ++ + G+LL +++K L++A+ +RG
Sbjct: 89 RLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLLGQ-GVSKKALENAINNLRGEG 147
Query: 239 RVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGE 298
V D N E QAL+KY DLT+ A GKLDPVIGRDDEIRR IQ+L RRTKNNPV+IGE
Sbjct: 148 AVNDPNIEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGE 207
Query: 299 PGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVT 358
PGVGKTAIAEGLAQRI+ G+VP+ L+ ++L+SLDM +L+AG YRG+FE+RLK++L E++
Sbjct: 208 PGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELS 267
Query: 359 KSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDP 418
K GQIILFIDELHT++GAG G+MDA NMLKP L RGEL C+GATTLNEYR YIEKD
Sbjct: 268 KQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDA 327
Query: 419 ALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLP 478
ALERRFQ+V D+PS E+TI+ILRGL+ERYE+HH V I RYIT+R LP
Sbjct: 328 ALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLP 387
Query: 479 DKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHD 538
DKAIDL+DEAA++++MEI SKP LD ++R +++L++E +LK + D+A+ +RL KL+ +
Sbjct: 388 DKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEE 447
Query: 539 LNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMI 598
+ L+++ +L + W+ EK ++ I+++I++ E+EAA R DLNR AEL+YG +
Sbjct: 448 IVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIP 507
Query: 599 SLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLE 658
L+R L+ +++ K + LLR +VT+ +IAE+VSKWTGIP+S + + EREKL+ +E
Sbjct: 508 DLERSLQMVDQH----GKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 659 EVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF 718
+LH RVIGQ+ AV +V++A+RRSRAGLSDP RP SFMF+GPTGVGKTEL KALA+FLF
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLF 623
Query: 719 NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAH 778
+TE A+VRIDMSE+MEKHSV+RL+GAPPGYVGYEEGG LTE VRR+PYSV+L DE+EKAH
Sbjct: 624 DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAH 683
Query: 779 QDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVM 838
DVFNILLQ+L+DGR+TDS GRTV F N V++MTSN+GS I E V D E
Sbjct: 684 SDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL---VGDR-----EAQ 735
Query: 839 KKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTK 898
+ V++ FRPEF+NRIDE ++F+PL +I+ I +IQ+ R++ RL ++++ + +
Sbjct: 736 RAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSP 795
Query: 899 EAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 937
EA+ L +G+DP +GARP+KR IQ+ +EN +A IL G
Sbjct: 796 EALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSG 834
>DICTYBASE|DDB_G0291314 [details] [associations]
symbol:DDB_G0291314 "putative endopeptidase Clp"
species:44689 "Dictyostelium discoideum" [GO:0019538 "protein
metabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0009408 "response to heat"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR017730
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
dictyBase:DDB_G0291314 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000177 GO:GO:0009408 GO:GO:0017111 GO:GO:0016485
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 OMA:ESHMVRI
TIGRFAMs:TIGR03346 RefSeq:XP_635137.1 ProteinModelPortal:Q54EV3
SMR:Q54EV3 STRING:Q54EV3 EnsemblProtists:DDB0231601 GeneID:8628083
KEGG:ddi:DDB_G0291314 InParanoid:Q54EV3 ProtClustDB:CLSZ2728751
Uniprot:Q54EV3
Length = 886
Score = 2172 (769.6 bits), Expect = 5.1e-225, P = 5.1e-225
Identities = 426/847 (50%), Positives = 599/847 (70%)
Query: 94 PTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQ 153
P EFT+K ++ + AR + + HL LL +D LA+ I KAG D K+
Sbjct: 5 PEEFTDKTNTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGGDVPKIDA 64
Query: 154 ATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFG 213
+ ++KQP S F +L +A R +K D ++V+HL+L L DDR
Sbjct: 65 GFKRLLAKQPVQNPVPPEISPNSLFLQVLRSAARHQKNNGDSHLAVDHLILGLL-DDRDI 123
Query: 214 RLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIG 273
+ D ++ + AVK +RG++++T + E Y+AL KYG DL A+ GKLDPVIG
Sbjct: 124 LSVLGDAGATKEQVIQAVKEIRGNKKITSKTAESTYEALSKYGYDLVSQAQEGKLDPVIG 183
Query: 274 RDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDM 333
RD+EIRR I++LSRRTKNNPV+IGEPGVGKTA+ EGLAQRIVRGD+P+ L N ++I+LDM
Sbjct: 184 RDEEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPDNL-NARVIALDM 242
Query: 334 ASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPM 393
+L+AG YRGDFE+RLKAVLKEV SNG IILFIDE+H ++GAG GAMDA+N+LKPM
Sbjct: 243 GALIAGAKYRGDFEERLKAVLKEVKDSNGGIILFIDEIHLVLGAGKTDGAMDAANLLKPM 302
Query: 394 LGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHG 453
L RGELRCIGATTL+EYR Y+EKDPA ERRFQQVF ++P+V +TISILRGL+ERYE HHG
Sbjct: 303 LARGELRCIGATTLDEYRQYVEKDPAFERRFQQVFVNEPTVNDTISILRGLKERYETHHG 362
Query: 454 VKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKL 513
V+I RYIT RFLPDKAIDLVDEA A ++++ S+P +D ++R L+L
Sbjct: 363 VRITDNALVVAAQLSHRYITNRFLPDKAIDLVDEACANTRVQLNSQPEAIDNLERRRLQL 422
Query: 514 EMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRV 573
E+E +L+ + D ASK+RL ++ +LN +K + + L ++ +E+ + +IR ++++++ +
Sbjct: 423 EVESAALEKEEDDASKQRLKAVQEELNQIKDELQPLEAKYQKERSRVDKIRELRKKLEDI 482
Query: 574 NLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAE 633
+++ AER YD + AA+ +Y + L++Q+E +K E +K +++ E VT IA+
Sbjct: 483 KVKLSDAERRYDTSAAADYRYFVIPDLEKQIEVCDKERKENKKD--AMVSEVVTPEQIAD 540
Query: 634 IVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPI 693
+VS+WTGIP+S L Q+E+++L+ L + LH RV+GQD AV +VADA+ RS++GL+ +P+
Sbjct: 541 VVSRWTGIPVSKLSQTEKQRLLSLADHLHNRVVGQDEAVDAVADAVLRSKSGLARENQPL 600
Query: 694 ASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEE 753
SF+F+GPTGVGKTEL KALA LF+ E+ +VRIDMSEYME+HSVSRL+GAPPGYVGY++
Sbjct: 601 GSFLFLGPTGVGKTELAKALALELFDDESHMVRIDMSEYMEQHSVSRLIGAPPGYVGYDQ 660
Query: 754 GGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTS 813
GGQLTE VRRRPYSVVLFDE+EKAHQ V+N+LLQ+LD+GR+TD QGRTV F+N V+IMTS
Sbjct: 661 GGQLTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTS 720
Query: 814 NIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEIS 873
N+GS YIL + + ++ + K +V++ R+ FRPEFLNR+D+ IVF PL + +
Sbjct: 721 NLGSQYILGEQANKEGGNNSLSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKENLH 780
Query: 874 KIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
I+ +Q+ V+ RL+ + + L + +A+ + +DP FG RP+KR I++ + E++
Sbjct: 781 SIITLQLRSVEKRLEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTELSKL 840
Query: 934 ILKGDIK 940
IL G +K
Sbjct: 841 ILGGKLK 847
>TIGR_CMR|NSE_0119 [details] [associations]
symbol:NSE_0119 "ClpB protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR017730
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0009408 GO:GO:0017111
GO:GO:0016485 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 TIGRFAMs:TIGR03346 RefSeq:YP_506019.1
ProteinModelPortal:Q2GES7 SMR:Q2GES7 STRING:Q2GES7 GeneID:3931955
KEGG:nse:NSE_0119 PATRIC:22680343 OMA:RRADSAN
ProtClustDB:CLSK2527660 BioCyc:NSEN222891:GHFU-155-MONOMER
Uniprot:Q2GES7
Length = 854
Score = 2126 (753.4 bits), Expect = 3.8e-220, P = 3.8e-220
Identities = 419/846 (49%), Positives = 590/846 (69%)
Query: 96 EFTEKAWEGIVGA-VDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQA 154
+FT+ + I A +DA + +Q + H+++ALL+ +G+ ++L + G + +L +
Sbjct: 5 KFTDNSASIIQSAQLDAVSMGHQTLTSL-HILRALLKNTNGIVTQLLEQCGANLDVILNS 63
Query: 155 TEDFISKQPKVTGATSGPI-VGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFG 213
E + K P V+G +G I + + + + I +D FV+VE LL + +
Sbjct: 64 VELTLRKLPSVSGQGAGHIHLTPDAAQTIQTSIEIAGRSQDSFVTVERLLQGVAATESEA 123
Query: 214 RLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIG 273
+ + ++ L+ + A RG +R N E + AL +Y DLTE+ARSGKLDPVIG
Sbjct: 124 SKILKEQGVDAAKLQQIIDANRGSRRADSANAENNFNALRRYTKDLTEIARSGKLDPVIG 183
Query: 274 RDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDM 333
RD+EIRR +Q+LSRRTKNNPV+IG+PGVGKTA+ EGLA R+V DVP+ L + L+SLD+
Sbjct: 184 RDEEIRRVMQVLSRRTKNNPVLIGDPGVGKTAVVEGLAMRMVAKDVPQNLASASLLSLDL 243
Query: 334 ASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPM 393
+L+AG+ YRG+FE+RLK+V+ E+ S G +ILFIDELHT++GAG GAMDASN+LKP
Sbjct: 244 GALIAGSKYRGEFEERLKSVINELADSGGSVILFIDELHTLVGAGATEGAMDASNLLKPA 303
Query: 394 LGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHG 453
L RGE+ C+GATTL EY+ +IEKD AL RRFQ +F QP+ E+TISILRG++E+YE+HHG
Sbjct: 304 LARGEIHCVGATTLEEYKKHIEKDAALARRFQPIFVGQPTEEDTISILRGIKEKYEVHHG 363
Query: 454 VKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKL 513
++I RYIT+RFLPDKAIDL+DEAA+K+++E SKP +DE+DR +++L
Sbjct: 364 IRIADSAVVSAAVLSNRYITDRFLPDKAIDLMDEAASKIRIESDSKPEVIDELDRKIIQL 423
Query: 514 EMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRV 573
++E +LK + D S RL K++ DL L++KQ +L W EK + I+ +KEE++
Sbjct: 424 KIEAEALKKEKDANSIGRLEKIKQDLEGLEKKQADLESSWQAEKSKLKEIQKLKEELNEA 483
Query: 574 NLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAE 633
+E A+R+ DL A ++ YGT+ +L+ +L EK + G +LL+ EVT+ DIA
Sbjct: 484 RYSLEIAQRNGDLATAGKILYGTIPALENRLVNEEKQV------GGTLLKREVTEDDIAN 537
Query: 634 IVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPI 693
IV+KWTGIP+ + SE+++L+ +E+ L K VIGQD AV++V+ A++RSRAG+ D RP+
Sbjct: 538 IVAKWTGIPVEKMMGSEQQRLLKIEDELKKHVIGQDEAVEAVSSAVKRSRAGVQDANRPL 597
Query: 694 ASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEE 753
SFMF+G TGVGKTEL KALA FLF+ E AL+RIDMSEYMEKH+V+RL+GAPPGYVGYEE
Sbjct: 598 GSFMFLGSTGVGKTELSKALAKFLFDNETALLRIDMSEYMEKHAVARLIGAPPGYVGYEE 657
Query: 754 GGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTS 813
GG LTE VRRRPY V+LFDE+EKAH DVFNILLQ+LD+GR+TD+QG V F N ++I+TS
Sbjct: 658 GGILTEAVRRRPYQVILFDEVEKAHHDVFNILLQVLDEGRLTDTQGHVVDFKNTILILTS 717
Query: 814 NIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEIS 873
N+GS + E Q + EV K +++E+ RQ FRPEFLNR+DE + F L + I
Sbjct: 718 NLGSDVLSEVTQ--------ITEVEKTKIMEIVRQFFRPEFLNRLDEILFFNRLSKENIE 769
Query: 874 KIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
KI+EIQ++++++R+K K + L +T EA + G+ P +GARP+KRVIQQ V N +A A
Sbjct: 770 KILEIQLHKLQERIKTKNLHLSFTHEAKRWICEQGYHPVYGARPLKRVIQQYVYNPLAQA 829
Query: 934 ILKGDI 939
IL G +
Sbjct: 830 ILSGSL 835
>TIGR_CMR|ECH_0367 [details] [associations]
symbol:ECH_0367 "ATP-dependent Clp protease, ATP-binding
subunit ClpB" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR017730 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006508 GO:GO:0009408 GO:GO:0017111
GO:GO:0008233 GO:GO:0016485 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HOGENOM:HOG000218211 KO:K03695 TIGRFAMs:TIGR03346
RefSeq:YP_507187.1 ProteinModelPortal:Q2GH96 SMR:Q2GH96
STRING:Q2GH96 GeneID:3926998 KEGG:ech:ECH_0367 PATRIC:20576223
OMA:FISAVEQ ProtClustDB:CLSK749495
BioCyc:ECHA205920:GJNR-368-MONOMER Uniprot:Q2GH96
Length = 857
Score = 2084 (738.7 bits), Expect = 1.1e-215, P = 1.1e-215
Identities = 415/847 (48%), Positives = 590/847 (69%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+FT+ + I+ A A + Q + EHL+K +L+ KD L +LT G D K+
Sbjct: 5 QFTDMSKNLIMQAQTTAIASGHQSLIPEHLLKVMLDTKDELIELLLTSCGCDIDKIYSDI 64
Query: 156 EDFISKQPKVTGATSGPI-VGSNFGLLLSNAQRIKKEMEDDFVSVEHLL--LAFLSDDRF 212
+ +SK P V+G+ SG I + +L A + K +D +V+VE LL LA + D
Sbjct: 65 KLSLSKLPVVSGSGSGHIHLSKEMAQVLEEAISLAKRNQDTYVTVERLLQALAVVKDTSV 124
Query: 213 GRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVI 272
++L + L+ + +R + N E K+ AL+KY D+TE A +GKLDPVI
Sbjct: 125 YKILLAH-GVTPVKLESLILNMRNGSKADTINAEHKFNALKKYAKDITESAMAGKLDPVI 183
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLD 332
GRD+EIRR +Q+LSRRTKNNPV+IGEPGVGKTAI EGLAQRIV GDVP L+N K+++LD
Sbjct: 184 GRDEEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIIEGLAQRIVVGDVPVGLRNAKIMALD 243
Query: 333 MASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKP 392
+ LVAGT YRG+FE+RLK V+ E+ SNG +ILFIDELHT++GAG GAMDASN+LKP
Sbjct: 244 LGMLVAGTKYRGEFEERLKYVINEIVASNGAVILFIDELHTLVGAGATDGAMDASNLLKP 303
Query: 393 MLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHH 452
L RGE+ CIGATTL+EYR +IEKD AL RRFQ VF + +V +TISILRGL+E+YE+HH
Sbjct: 304 ALARGEIHCIGATTLDEYRQHIEKDAALARRFQPVFVSESTVNDTISILRGLKEKYEVHH 363
Query: 453 GVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLK 512
G++I RYIT+RFLPDKAIDL+DEAA+++++EI SKP +DE+DR +++
Sbjct: 364 GIRIMDSAIIAASTLSNRYITDRFLPDKAIDLIDEAASRVRIEIDSKPEVIDELDRKIIQ 423
Query: 513 LEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDR 572
L++E L+ + ++SK+RL++L +LN L + ELN +W EK + +++ E++D
Sbjct: 424 LKIEAGVLEKENTESSKQRLAQLSEELNKLSIQATELNSKWQAEKMKILKMQECVEKLDN 483
Query: 573 VNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIA 632
++E A+R +L +A EL YG + L+++L++ EK S ++L+ EVT+ DIA
Sbjct: 484 ARNDLEKAQRSGNLAKAGELMYGIIPELEKELKKCEKPSS-------NMLKREVTESDIA 536
Query: 633 EIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARP 692
IVS+WTGIP+ ++ SE+EKL+ +EE + K VIGQ+ A+K+V+DA+RRSRAG+ D +P
Sbjct: 537 SIVSRWTGIPIENMMSSEKEKLLRMEEEIGKTVIGQESAIKAVSDAVRRSRAGVQDANKP 596
Query: 693 IASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYE 752
+ SF+F+GPTGVGKTEL K LA+FLF ++AL+R DMSE+MEKH+VSRL+GAPPGYVGY+
Sbjct: 597 LGSFLFLGPTGVGKTELVKTLAEFLFCDKSALLRFDMSEFMEKHAVSRLIGAPPGYVGYD 656
Query: 753 EGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMT 812
+GG LTE VRRRPY V+LFDEIEKAH D+FNILLQ+LD+GR+TD+ G+ V F N ++++T
Sbjct: 657 QGGMLTESVRRRPYQVILFDEIEKAHGDIFNILLQVLDEGRLTDNHGKLVDFRNTILVLT 716
Query: 813 SNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEI 872
SN+G ++ + V E +KK + + + FRPEFLNR+DE IVF L + I
Sbjct: 717 SNLGQEILINNKEDVDG------ESVKKSITSVLQHHFRPEFLNRLDEIIVFHRLTKEHI 770
Query: 873 SKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAV 932
KI+++Q + ++ + QK++++ + EA + L G+D +GARP+KR+IQQ ++N +A
Sbjct: 771 EKIIDVQFSLLQKIVAQKELEISLSSEAKSWLMNNGYDSLYGARPLKRLIQQKIQNSLAK 830
Query: 933 AILKGDI 939
IL +
Sbjct: 831 LILANQV 837
>TIGR_CMR|APH_0235 [details] [associations]
symbol:APH_0235 "ATP-dependent chaperone protein ClpB"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0042026 "protein
refolding" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0017111
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 OMA:RRADSAN ProtClustDB:CLSK749495 RefSeq:YP_504852.1
ProteinModelPortal:Q2GL99 SMR:Q2GL99 STRING:Q2GL99 GeneID:3931177
KEGG:aph:APH_0235 PATRIC:20949050
BioCyc:APHA212042:GHPM-267-MONOMER Uniprot:Q2GL99
Length = 859
Score = 2057 (729.2 bits), Expect = 7.8e-213, P = 7.8e-213
Identities = 417/847 (49%), Positives = 592/847 (69%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDN--TKVLQ 153
+FTEKA ++ A A + Q + EHL+K +L++K L +++ + + ++
Sbjct: 5 KFTEKARSFVMQAQVFAISSGHQFLLPEHLLKVMLDEKGSLTENLISMSSCNAGINEIRD 64
Query: 154 ATEDFISKQPKVTGATSGPI-VGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLS-DDR 211
A +SK P V+G++SG + + +L A I K D ++S E LL A + +
Sbjct: 65 ALVQHLSKLPVVSGSSSGQLNLSRELAQVLEEASNIAKRNGDAYISAERLLQALVVVNSN 124
Query: 212 FGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPV 271
R+L N + L ++ +R + + E K+ AL K+ DLTELA GK+DPV
Sbjct: 125 VSRVLIN-AGVTATKLNTLIEKMREGDKADSETAEQKFDALRKFTQDLTELATEGKMDPV 183
Query: 272 IGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISL 331
IGR DE RR IQ+LSRRTKNNP +IGEPGVGK+AI EGL Q IV G+VP LQ K++SL
Sbjct: 184 IGRSDETRRLIQVLSRRTKNNPALIGEPGVGKSAIVEGLVQSIVSGNVPIGLQGAKVLSL 243
Query: 332 DMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLK 391
D+A+LVAGT YRG+FE+RLKAVL ++ S+G+IILFIDELH ++GAG+ +MDASN+LK
Sbjct: 244 DLAALVAGTKYRGEFEERLKAVLSKIILSSGKIILFIDELHMLVGAGSTGDSMDASNILK 303
Query: 392 PMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELH 451
P+L RGELRCIGATTL+EYR +IEKDPAL RRFQ VF +PS+ +TISILRG++E+YELH
Sbjct: 304 PVLARGELRCIGATTLDEYREHIEKDPALARRFQPVFVAEPSINDTISILRGIKEKYELH 363
Query: 452 HGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVL 511
HG++I RYI +RFLPDKAIDL+DEAA++ ++EI SKP +D IDR V+
Sbjct: 364 HGIRITDSAIVAAANLSSRYIPDRFLPDKAIDLIDEAASRARIEIDSKPEIIDSIDRQVM 423
Query: 512 KLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEID 571
+L++E +LKN+ +ASK+RL ++ +L SL + +LN QW EK +S++ + E +D
Sbjct: 424 QLKIESEALKNENTEASKQRLEEISRELQSLSSEAADLNSQWHAEKAKISKMHELTESLD 483
Query: 572 RVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDI 631
+E+E ++R +L+RA EL YG + SL+ +L++ E + +G +LLR+E+ DI
Sbjct: 484 SARIELEQSQRLGNLSRAGELMYGIIPSLEAELKKHE------EIAG-TLLRKEIKANDI 536
Query: 632 AEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPAR 691
A IV +WTGIP+ S+ SE+EKL+ +EE L K VIGQD AV +V++A+RRSRAG+ D R
Sbjct: 537 AAIVERWTGIPVDSVMNSEKEKLLHMEEELKKTVIGQDSAVAAVSNAVRRSRAGVQDAQR 596
Query: 692 PIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGY 751
P+ SF+F+GPTGVGKTEL KAL+ FLF++ +AL+R DMSE+MEKHSV++L+GAPPGYVGY
Sbjct: 597 PMGSFLFLGPTGVGKTELTKALSKFLFDSSSALLRFDMSEFMEKHSVAKLIGAPPGYVGY 656
Query: 752 EEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIM 811
E+GG LTE VRRRPY V+LFDEIEKAH D+FN+LLQ+LD+GR+TDS+G V+F N ++++
Sbjct: 657 EQGGLLTEAVRRRPYQVILFDEIEKAHADIFNLLLQVLDEGRLTDSRGNLVNFKNTILVL 716
Query: 812 TSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKE 871
TSNIG ++ S +DS + V ++K V+E+ R +FRPEFLNR+DE ++F L +
Sbjct: 717 TSNIGQDILIN---STEDSNDPV---VRKTVLEMLRLSFRPEFLNRLDEIMIFNRLTQEH 770
Query: 872 ISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIA 931
I IV++Q++ ++ + K I + + A + L G+D GAR +KR+IQQ ++N++A
Sbjct: 771 IEHIVDVQISNLQKIISDKGITISLHQGAKSWLVKHGYDVACGARLLKRLIQQHIQNQLA 830
Query: 932 VAILKGD 938
+L GD
Sbjct: 831 CLLL-GD 836
>TAIR|locus:2019667 [details] [associations]
symbol:HSP101 "heat shock protein 101" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009408 "response to heat"
evidence=IEP;IGI;RCA;IMP] [GO:0043335 "protein unfolding"
evidence=IMP] [GO:0009644 "response to high light intensity"
evidence=IEP;RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=IEP;RCA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0045727 "positive regulation of translation"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0009570 GO:GO:0009941 GO:GO:0009408
GO:GO:0009644 GO:GO:0042542 GO:GO:0017111 GO:GO:0043335
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 EMBL:U13949
EMBL:AF218796 EMBL:AC020579 EMBL:AY062596 IPI:IPI00519771
PIR:F96771 RefSeq:NP_565083.1 UniGene:At.48370 UniGene:At.69978
ProteinModelPortal:P42730 SMR:P42730 IntAct:P42730 STRING:P42730
PaxDb:P42730 PRIDE:P42730 EnsemblPlants:AT1G74310.1 GeneID:843771
KEGG:ath:AT1G74310 GeneFarm:2733 TAIR:At1g74310
HOGENOM:HOG000218211 InParanoid:P42730 KO:K03695 OMA:DTEKAVM
PhylomeDB:P42730 ProtClustDB:CLSN2689194 Genevestigator:P42730
GermOnline:AT1G74310 Uniprot:P42730
Length = 911
Score = 2011 (713.0 bits), Expect = 5.8e-208, P = 5.8e-208
Identities = 418/855 (48%), Positives = 586/855 (68%)
Query: 92 ITPTEFTEKAWEGIVGAVDAARVNNQQVVETE-HLMKALLEQKDGLARRILTKAGQDNTK 150
+ P +FT K E I A + A VN T HL AL+ G+ + ++ AG +N
Sbjct: 1 MNPEKFTHKTNETIATAHELA-VNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAA 59
Query: 151 VLQATEDFISKQPKVTGATSGPI--VGSNFGLL--LSNAQRIKKEMEDDFVSVEHLLLAF 206
Q+ E I++ K + S P + ++ L+ + AQ +K D ++V+ L++
Sbjct: 60 --QSAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGL 117
Query: 207 LSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQ--RVTDQNPEGKYQALEKYGNDLTELAR 264
L D + R L N++ + +K V+ +RG + +V + + +QAL+ YG DL E A
Sbjct: 118 LEDSQI-RDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQA- 175
Query: 265 SGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQ 324
GKLDPVIGRD+EIRR ++ILSRRTKNNPV+IGEPGVGKTA+ EGLAQRIV+GDVP +L
Sbjct: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLT 234
Query: 325 NRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAM 384
+ +LISLDM +LVAG YRG+FE+RLK+VLKEV + G++ILFIDE+H ++GAG G+M
Sbjct: 235 DVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSM 294
Query: 385 DASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGL 444
DA+N+ KPML RG+LRCIGATTL EYR Y+EKD A ERRFQQV+ +PSV +TISILRGL
Sbjct: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGL 354
Query: 445 RERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELD 504
+E+YE HHGV+I RYIT R LPDKAIDLVDEA A +++++ S+P E+D
Sbjct: 355 KEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
Query: 505 EIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIR 564
++R ++LE+E +L+ + DKASK RL ++ +L+ L+ K + L ++ +EK+ + IR
Sbjct: 415 NLERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIR 474
Query: 565 SIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLRE 624
+K++ + + ++ AER YDL RAA+L+YG + ++ + + E SE + +L E
Sbjct: 475 RLKQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSE----ENVMLTE 530
Query: 625 EVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRA 684
V IAE+VS+WTGIP++ L Q+E+E+L+ L + LHKRV+GQ+ AV +V++AI RSRA
Sbjct: 531 NVGPEHIAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRA 590
Query: 685 GLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGA 744
GL P +P SF+F+GPTGVGKTEL KALA+ LF+ EN LVRIDMSEYME+HSVSRL+GA
Sbjct: 591 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 650
Query: 745 PPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSF 804
PPGYVG+EEGGQLTE VRRRPY V+LFDE+EKAH VFN LLQ+LDDGR+TD QGRTV F
Sbjct: 651 PPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDF 710
Query: 805 TNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVF 864
N V+IMTSN+G+ ++L L + EV + V+ R+ FRPE LNR+DE +VF
Sbjct: 711 RNSVIIMTSNLGAEHLLAGLTG-----KVTMEVARDCVMREVRKHFRPELLNRLDEIVVF 765
Query: 865 QPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQ 924
PL ++ K+ +QM V RL ++ + L T A+ + +DP +GARP++R +++
Sbjct: 766 DPLSHDQLRKVARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEK 825
Query: 925 LVENEIAVAILKGDI 939
V E++ +++ +I
Sbjct: 826 KVVTELSKMVVREEI 840
>UNIPROTKB|Q6F2Y7 [details] [associations]
symbol:CLPB1 "Chaperone protein ClpB1" species:39947 "Oryza
sativa Japonica Group" [GO:0034605 "cellular response to heat"
evidence=IGI] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0034605
EMBL:AP008211 GO:GO:0009644 GO:GO:0042542 GO:GO:0017111
EMBL:CM000142 GO:GO:0043335 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03695 ProtClustDB:CLSN2689194 EMBL:AF332981 EMBL:AJ316025
EMBL:AC130611 EMBL:AC132491 EMBL:AK105433 RefSeq:NP_001056066.1
UniGene:Os.8971 ProteinModelPortal:Q6F2Y7 SMR:Q6F2Y7 PRIDE:Q6F2Y7
EnsemblPlants:LOC_Os05g44340.1 GeneID:4339343
KEGG:dosa:Os05t0519700-01 KEGG:osa:4339343 Gramene:Q6F2Y7
OMA:ESHMVRI Uniprot:Q6F2Y7
Length = 912
Score = 1989 (705.2 bits), Expect = 1.3e-205, P = 1.3e-205
Identities = 410/854 (48%), Positives = 579/854 (67%)
Query: 92 ITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKV 151
+ P FT K E +V A + A + HL+ AL K G+ R+ +++A +
Sbjct: 1 MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGA 60
Query: 152 LQATEDFISKQPKVTGATSGP--IVGSNFGLL--LSNAQRIKKEMEDDFVSVEHLLLAFL 207
+ E +S K + S P V ++ L+ + AQ +K+ D ++V+ LLL L
Sbjct: 61 PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 208 SDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQ--RVTDQNPEGKYQALEKYGNDLTELARS 265
D L + ++ ++ ++ +RG + +V + + +QAL+ YG DL E A
Sbjct: 121 EDSLISDCL-KEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQA-- 177
Query: 266 GKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQN 325
GKLDPVIGRD+EIRR ++ILSRRTKNNPV+IGEPGVGKTA+ EGLAQRIVRGDVP L +
Sbjct: 178 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLD 237
Query: 326 RKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMD 385
+LI+LDM +LVAG YRG+FE+RLKAVLKEV ++ G++ILFIDE+H ++GAG G+MD
Sbjct: 238 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 297
Query: 386 ASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLR 445
A+N+ KPML RG+LRCIGATTL EYR Y+EKD A ERRFQQVF +PSV +TISILRGL+
Sbjct: 298 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLK 357
Query: 446 ERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDE 505
E+YE HHGV+I RYI R LPDKAIDLVDEA A +++++ S+P E+D
Sbjct: 358 EKYEGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 417
Query: 506 IDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRS 565
++R ++LE+E +L+ + DKASK RL +++ +L+ L+ K + L ++ +EK+ + IR
Sbjct: 418 LERKRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRK 477
Query: 566 IKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREE 625
+K+ + + ++ AER DL R A+LKYG + + + + E E + +L E
Sbjct: 478 LKQRREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLESETGE-----NLMLTET 532
Query: 626 VTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAG 685
V IAE+VS+WTGIP++ L Q+++E+LV L + LH+RV+GQ AV +VA+A+ RSRAG
Sbjct: 533 VGPEQIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAG 592
Query: 686 LSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAP 745
L P +P SF+F+GPTGVGKTEL KALA+ LF+ EN LVRIDMSEYME+HSV+RL+GAP
Sbjct: 593 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAP 652
Query: 746 PGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFT 805
PGYVG+EEGGQLTE VRRRPYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QGRTV F
Sbjct: 653 PGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFR 712
Query: 806 NCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQ 865
N V+IMTSN+G+ ++L + K V + V++ R+ FRPE LNR+DE ++F
Sbjct: 713 NTVIIMTSNLGAEHLLAGMVGKNSMK-----VARDLVMQEVRRHFRPELLNRLDEIVIFD 767
Query: 866 PLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQL 925
PL +++ K+ +QM V RL ++ + L T A+ ++ L +DP +GARP++R I++
Sbjct: 768 PLSHEQLRKVARLQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKR 827
Query: 926 VENEIAVAILKGDI 939
V +++ +++ +I
Sbjct: 828 VVTQLSKMLIQEEI 841
>POMBASE|SPBC16D10.08c [details] [associations]
symbol:SPBC16D10.08c "heat shock protein Hsp104
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0033554
"cellular response to stress" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0051085 "chaperone mediated
protein folding requiring cofactor" evidence=ISO] [GO:0051087
"chaperone binding" evidence=ISO] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 PomBase:SPBC16D10.08c GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0033554 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0051087 GO:GO:0031072 GO:GO:0042623 GO:GO:0051085
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
PIR:T39572 RefSeq:NP_596503.1 HSSP:P63284 ProteinModelPortal:O94641
SMR:O94641 STRING:O94641 PRIDE:O94641 EnsemblFungi:SPBC16D10.08c.1
GeneID:2540026 KEGG:spo:SPBC16D10.08c OMA:SKENIRS OrthoDB:EOG4T4H3H
NextBio:20801169 Uniprot:O94641
Length = 905
Score = 1933 (685.5 bits), Expect = 1.1e-199, P = 1.1e-199
Identities = 410/859 (47%), Positives = 566/859 (65%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDG----LARRILTKAGQDNTKVL 152
FT+KA + + A A+ + H+ ALL D L R I+ KAG D K
Sbjct: 6 FTDKAAKTLSDAYSIAQSYGHSQLTPIHIAAALLSDSDSNGTTLLRTIVDKAGGDGQKFE 65
Query: 153 QATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRF 212
++ + + P + LL NA ++K +D +++ +H + F DD
Sbjct: 66 RSVTSRLVRLPAQDPPPEQVTLSPESAKLLRNAHELQKTQKDSYIAQDHFIAVFTKDDTL 125
Query: 213 GRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVI 272
LL + + K + AV VRG++R+ +N E + AL K+ DLTELAR+G+LDPVI
Sbjct: 126 KSLLA-EAGVTPKAFEFAVNNVRGNKRIDSKNAEEGFDALNKFTVDLTELARNGQLDPVI 184
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLD 332
GR+DEIRR I++LSRRTKNNPV+IGEPGVGKT+IAEGLA+RI+ DVP L N KL+SLD
Sbjct: 185 GREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLD 244
Query: 333 MASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQS-GAMDASNMLK 391
+ SLVAG+ +RG+FE+R+K+VLKEV +S IILF+DE+H ++GAG+ G MDA+N+LK
Sbjct: 245 VGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAANLLK 304
Query: 392 PMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELH 451
PML RG+L CIGATTL EY+ YIEKD A ERRFQ + +PS+E+TISILRGL+E+YE+H
Sbjct: 305 PMLARGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEKYEVH 364
Query: 452 HGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVL 511
HGV I RY+T R LPD AIDLVDEAAA +++ S+P LD ++R +
Sbjct: 365 HGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLR 424
Query: 512 KLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEID 571
+L +E +L+ + D+ASKERL + ++++ + + +++ EK S ++ K +D
Sbjct: 425 QLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLD 484
Query: 572 RVNLEMEAAERDYDLNRAAELKYGTMISLQRQLE--EAEKN------LSEFQKSGHSLLR 623
+ + E AER D AA+LKY + LQ+++E E +K ++ Q LL
Sbjct: 485 ELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQPGSEPLLI 544
Query: 624 EEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSR 683
+ V I EIV++WTGIP++ L+ +E+E+L+ +E+VL K+VIGQ+ AV +VA+AIR SR
Sbjct: 545 DVVGPDQINEIVARWTGIPVTRLKTTEKERLLNMEKVLSKQVIGQNEAVTAVANAIRLSR 604
Query: 684 AGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVG 743
AGLSDP +PIASF+F GP+G GKT L KALA F+F+ ENA++RIDMSEYMEKHSVSRL+G
Sbjct: 605 AGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVSRLIG 664
Query: 744 APPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVS 803
APPGYVG+E GGQLTE +RRRPYSV+LFDEIEKA +V +LLQ+LDDGRIT QG+ V
Sbjct: 665 APPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQGQVVD 724
Query: 804 FTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIV 863
N V+IMTSN+G+ Y+ +S D K + ++ V+ R FRPEFLNRI ++
Sbjct: 725 AKNAVIIMTSNLGAEYLTTDNES-DDGK--IDSTTREMVMNSIRGFFRPEFLNRISSIVI 781
Query: 864 FQPLDSKEISKIVEIQMNRVKDRLKQ--KKIDLHYTKEAVTLLGILGFDPNFGARPVKRV 921
F L +I IVE ++ V+ RL+ + I + + EA LLG G+ P +GARP+ RV
Sbjct: 782 FNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNRV 841
Query: 922 IQQLVENEIAVAILKGDIK 940
IQ V N +AV IL G ++
Sbjct: 842 IQNQVLNPMAVLILNGQLR 860
>DICTYBASE|DDB_G0289047 [details] [associations]
symbol:DDB_G0289047 "putative endopeptidase Clp"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS00871 SMART:SM00382 dictyBase:DDB_G0289047 GO:GO:0005524
EMBL:AAFI02000129 GO:GO:0017111 eggNOG:COG0542 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 OMA:RAGLHSH RefSeq:XP_636444.1
ProteinModelPortal:Q54I27 SMR:Q54I27 STRING:Q54I27
EnsemblProtists:DDB0231600 GeneID:8626937 KEGG:ddi:DDB_G0289047
InParanoid:Q54I27 ProtClustDB:CLSZ2429824 Uniprot:Q54I27
Length = 795
Score = 1925 (682.7 bits), Expect = 7.6e-199, P = 7.6e-199
Identities = 376/699 (53%), Positives = 521/699 (74%)
Query: 242 DQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGV 301
D P G +AL+KY DLTE+A+SGKLDPVIGRD+EIRR IQ+LSRRTKNNPV+IGEPGV
Sbjct: 88 DNVPPG--EALKKYTKDLTEIAKSGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGV 145
Query: 302 GKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSN 361
GKTAI EGLAQRI+ GDVP++++N+++++LD+AS+VAG +RGDFE+R+K++LK+V
Sbjct: 146 GKTAIVEGLAQRIINGDVPDSIKNKRVLTLDLASIVAGAKFRGDFEERMKSILKDVAHFK 205
Query: 362 GQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALE 421
G++ILFIDELHT++GAG G MDASNMLKP L RG+L C+GATT EYR YIEKDPAL
Sbjct: 206 GEVILFIDELHTLVGAGAVEGGMDASNMLKPQLARGDLHCVGATTTAEYRKYIEKDPALA 265
Query: 422 RRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKA 481
RRFQ V +PSVE++I+ILRGL+ERYE+HHGV+I RYIT+RFLPDKA
Sbjct: 266 RRFQSVLVQEPSVEDSIAILRGLKERYEVHHGVRITDSALVAAVVNSQRYITDRFLPDKA 325
Query: 482 IDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNS 541
IDL+DEAA++L+++ S P E++ ++R ++ ++E +LK + D+ SKER KLE +L
Sbjct: 326 IDLIDEAASRLRLQQESLPEEIENLNRQIIVSKIELEALKKEKDQVSKERREKLEKELKE 385
Query: 542 LKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQ 601
++ +L + W +EK+ +S ++ E++DR +E++ A+R DL RA EL Y + L+
Sbjct: 386 KDKQYNKLTEVWKKEKEQLSIRKTAVEKLDRAKIELQQAQRKGDLARAGELAYSIIPQLE 445
Query: 602 RQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVL 661
+Q+ + E Q S S++ + VT D+A ++SK TGIP+ S+ E+EKL+ +E+ L
Sbjct: 446 KQIPKE----GEEQSSDISMVSDAVTAKDVALVISKATGIPVHSMLMGEKEKLLKMEDEL 501
Query: 662 HKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTE 721
+VIGQ AV +V++A+R SRAGL +RP+ SF+F+GPTGVGKT+L + LA+F+F++
Sbjct: 502 GSQVIGQPEAVTAVSNAVRISRAGLHSHSRPLGSFLFLGPTGVGKTQLCRTLAEFMFDSP 561
Query: 722 NALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDV 781
NAL+RIDMSEYMEK SVSRL+GAPPGYVGYEEGG LTE VRRRPYS+VLFDE EKAH++V
Sbjct: 562 NALIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGTLTEAVRRRPYSLVLFDEFEKAHKEV 621
Query: 782 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQ 841
N+LLQ+LDDG ITDSQGR + F N +VI+TSN+G+ E L ++ D+ + +++
Sbjct: 622 SNLLLQILDDGHITDSQGRKIDFRNTMVILTSNLGA----EILANLPDNTPSA--TAREE 675
Query: 842 VVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAV 901
V+ + R F PEFLNRID+ I+F L K++ KIVEIQ++ ++ L +K I L+ ++ +
Sbjct: 676 VMGVVRSRFPPEFLNRIDDMILFNRLSRKDMDKIVEIQLDDLRKLLTEKHIALNVKEDGL 735
Query: 902 TLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
L G+DP +GARP+KRVIQ+ + N +A IL+G IK
Sbjct: 736 DWLADQGYDPIYGARPLKRVIQKTLLNPMAKQILEGKIK 774
>UNIPROTKB|Q3A9N1 [details] [associations]
symbol:CHY_2348 "Negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 1008 (359.9 bits), Expect = 1.4e-198, Sum P(2) = 1.4e-198
Identities = 204/382 (53%), Positives = 284/382 (74%)
Query: 563 IRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLL 622
++ ++E+I+ + E EAA + +AA+L+ L+ +LEE +K E ++S H L
Sbjct: 418 LKELEEKINEIRKEKEAAVAAQEFEKAAKLRDQEQ-KLKAELEEKKKEW-EKEQSDHLL- 474
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
VT+ DIA+IVS+WTGIP+ L + E E+L+ LEE+LH+RVIGQD AVK+VA A+RR+
Sbjct: 475 --SVTEDDIAQIVSQWTGIPVKKLAEEESERLLKLEEILHQRVIGQDEAVKAVARAVRRA 532
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL DP RPI SF+F+GPTGVGKTEL +ALA+ LF E+AL+RIDMSEYMEKH+V+RL+
Sbjct: 533 RAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMEKHTVARLI 592
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVGYEEGGQLTE VRR+PYSV+L DEIEKAH +VFNILLQ+L+DGR+TDS+GRTV
Sbjct: 593 GAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTV 652
Query: 803 SFTNCVVIMTSNIGSHYILET----LQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRI 858
F N V+IMTSNIG+H I + ++V D K+ ++ +K + EL R TFRPEFLNRI
Sbjct: 653 DFKNTVIIMTSNIGAHLIKKEARLGFKNVADEKKEE-DIKEKLMAELKR-TFRPEFLNRI 710
Query: 859 DEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPV 918
DE IVF L + + +IV + + V RL+++++ + + + ++ G+D FGARP+
Sbjct: 711 DEIIVFHSLTEEHLKQIVRLMLKEVGKRLEEQEMKVEFDDSLIEVILKEGYDEAFGARPL 770
Query: 919 KRVIQQLVENEIAVAILKGDIK 940
+R IQ++VE++++ +L G+IK
Sbjct: 771 RRAIQKIVEDKLSEELLLGNIK 792
Score = 937 (334.9 bits), Expect = 1.4e-198, Sum P(2) = 1.4e-198
Identities = 205/486 (42%), Positives = 296/486 (60%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+FT++A + I A + AR N V TEHL+ ++ + + +A ++L G D KV +
Sbjct: 4 KFTQRAQKVIRMAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKI 63
Query: 156 EDFIS--KQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR-- 211
+ + + P P L + A R ++V EHLLL + +
Sbjct: 64 LELVGPGEGPMPAEIAFTPRAKRVLELSVDEAARFGH----NYVGTEHLLLGLIREGEGV 119
Query: 212 FGRLLFN---DIRLNEKDLKDA-----VKAVRGHQRVTDQNPEGKYQALEKYGNDLTELA 263
R+L + D+ ++ + G + + L+++G DLT LA
Sbjct: 120 AARVLVSLGADLERVRAEITQVLSGGPIPGTSGQAGGQAKKKAVRTPTLDEHGRDLTALA 179
Query: 264 RSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETL 323
R KLDPV+GR+ EI R IQ+LSRRTKNNPV+IGEPGVGKTAI EGLAQRIV+ VPE L
Sbjct: 180 RENKLDPVVGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVQKKVPEIL 239
Query: 324 QNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGA 383
++++++LD+AS+VAGT YRG+FE+RLK VL+E+ K+ G +I+FIDE+HT+IGAG GA
Sbjct: 240 IDKRVVTLDLASMVAGTKYRGEFEERLKKVLEEI-KNAGNVIVFIDEIHTLIGAGAAEGA 298
Query: 384 MDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRG 443
+DA+N+LKP L RGE++C+GATTL+EYR YIEKDPALERRFQ + D+P+VE T+ IL+G
Sbjct: 299 IDAANILKPSLARGEIQCVGATTLDEYRKYIEKDPALERRFQPIMVDEPTVEETVEILKG 358
Query: 444 LRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIEL 503
LR+RYE HH VKI RYIT+RFLPDKAIDL+DEAA+++++ + P L
Sbjct: 359 LRDRYEAHHRVKITDEAIIAAAKLSDRYITDRFLPDKAIDLIDEAASRVRLNAFTAPPNL 418
Query: 504 DEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRI 563
E++ + ++ EK + E+ +KL LK + +E +W EK+ +
Sbjct: 419 KELEEKINEIRKEKEAA---VAAQEFEKAAKLRDQEQKLKAELEEKKKEW--EKEQSDHL 473
Query: 564 RSIKEE 569
S+ E+
Sbjct: 474 LSVTED 479
>TIGR_CMR|CHY_2348 [details] [associations]
symbol:CHY_2348 "negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 1008 (359.9 bits), Expect = 1.4e-198, Sum P(2) = 1.4e-198
Identities = 204/382 (53%), Positives = 284/382 (74%)
Query: 563 IRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLL 622
++ ++E+I+ + E EAA + +AA+L+ L+ +LEE +K E ++S H L
Sbjct: 418 LKELEEKINEIRKEKEAAVAAQEFEKAAKLRDQEQ-KLKAELEEKKKEW-EKEQSDHLL- 474
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
VT+ DIA+IVS+WTGIP+ L + E E+L+ LEE+LH+RVIGQD AVK+VA A+RR+
Sbjct: 475 --SVTEDDIAQIVSQWTGIPVKKLAEEESERLLKLEEILHQRVIGQDEAVKAVARAVRRA 532
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL DP RPI SF+F+GPTGVGKTEL +ALA+ LF E+AL+RIDMSEYMEKH+V+RL+
Sbjct: 533 RAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMEKHTVARLI 592
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVGYEEGGQLTE VRR+PYSV+L DEIEKAH +VFNILLQ+L+DGR+TDS+GRTV
Sbjct: 593 GAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTV 652
Query: 803 SFTNCVVIMTSNIGSHYILET----LQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRI 858
F N V+IMTSNIG+H I + ++V D K+ ++ +K + EL R TFRPEFLNRI
Sbjct: 653 DFKNTVIIMTSNIGAHLIKKEARLGFKNVADEKKEE-DIKEKLMAELKR-TFRPEFLNRI 710
Query: 859 DEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPV 918
DE IVF L + + +IV + + V RL+++++ + + + ++ G+D FGARP+
Sbjct: 711 DEIIVFHSLTEEHLKQIVRLMLKEVGKRLEEQEMKVEFDDSLIEVILKEGYDEAFGARPL 770
Query: 919 KRVIQQLVENEIAVAILKGDIK 940
+R IQ++VE++++ +L G+IK
Sbjct: 771 RRAIQKIVEDKLSEELLLGNIK 792
Score = 937 (334.9 bits), Expect = 1.4e-198, Sum P(2) = 1.4e-198
Identities = 205/486 (42%), Positives = 296/486 (60%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+FT++A + I A + AR N V TEHL+ ++ + + +A ++L G D KV +
Sbjct: 4 KFTQRAQKVIRMAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKI 63
Query: 156 EDFIS--KQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR-- 211
+ + + P P L + A R ++V EHLLL + +
Sbjct: 64 LELVGPGEGPMPAEIAFTPRAKRVLELSVDEAARFGH----NYVGTEHLLLGLIREGEGV 119
Query: 212 FGRLLFN---DIRLNEKDLKDA-----VKAVRGHQRVTDQNPEGKYQALEKYGNDLTELA 263
R+L + D+ ++ + G + + L+++G DLT LA
Sbjct: 120 AARVLVSLGADLERVRAEITQVLSGGPIPGTSGQAGGQAKKKAVRTPTLDEHGRDLTALA 179
Query: 264 RSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETL 323
R KLDPV+GR+ EI R IQ+LSRRTKNNPV+IGEPGVGKTAI EGLAQRIV+ VPE L
Sbjct: 180 RENKLDPVVGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVQKKVPEIL 239
Query: 324 QNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGA 383
++++++LD+AS+VAGT YRG+FE+RLK VL+E+ K+ G +I+FIDE+HT+IGAG GA
Sbjct: 240 IDKRVVTLDLASMVAGTKYRGEFEERLKKVLEEI-KNAGNVIVFIDEIHTLIGAGAAEGA 298
Query: 384 MDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRG 443
+DA+N+LKP L RGE++C+GATTL+EYR YIEKDPALERRFQ + D+P+VE T+ IL+G
Sbjct: 299 IDAANILKPSLARGEIQCVGATTLDEYRKYIEKDPALERRFQPIMVDEPTVEETVEILKG 358
Query: 444 LRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIEL 503
LR+RYE HH VKI RYIT+RFLPDKAIDL+DEAA+++++ + P L
Sbjct: 359 LRDRYEAHHRVKITDEAIIAAAKLSDRYITDRFLPDKAIDLIDEAASRVRLNAFTAPPNL 418
Query: 504 DEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRI 563
E++ + ++ EK + E+ +KL LK + +E +W EK+ +
Sbjct: 419 KELEEKINEIRKEKEAA---VAAQEFEKAAKLRDQEQKLKAELEEKKKEW--EKEQSDHL 473
Query: 564 RSIKEE 569
S+ E+
Sbjct: 474 LSVTED 479
>UNIPROTKB|G4MSB3 [details] [associations]
symbol:MGG_04437 "Heat shock protein 78" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS00871 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0017111 EMBL:CM001232 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03695 RefSeq:XP_003713532.1
ProteinModelPortal:G4MSB3 SMR:G4MSB3 EnsemblFungi:MGG_04437T0
GeneID:2677834 KEGG:mgr:MGG_04437 Uniprot:G4MSB3
Length = 806
Score = 1855 (658.1 bits), Expect = 1.1e-194, Sum P(2) = 1.1e-194
Identities = 368/709 (51%), Positives = 509/709 (71%)
Query: 236 GHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVI 295
G R+ E + ALE+YG DLT A+ GKLDPVIGRD EI+R IQ+LSRRTKNNPV+
Sbjct: 77 GTHRMNMSGGEEEKPALEQYGIDLTAKAKEGKLDPVIGRDGEIQRTIQVLSRRTKNNPVL 136
Query: 296 IGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLK 355
IG G GKTAI EGLA RIVRGDVPE+++N+++ISLD+ SL+AG +RGDFE+RLK VL
Sbjct: 137 IGNAGTGKTAILEGLALRIVRGDVPESIKNKRVISLDLGSLIAGAKFRGDFEERLKKVLT 196
Query: 356 EVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIE 415
EV ++NGQ+ILFIDELHT++G G G++DASN+LKP L RGEL+C GATTLNEYR IE
Sbjct: 197 EVEQANGQVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYR-LIE 255
Query: 416 KDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITER 475
KD AL RRFQ + ++P+VE+TISILRG++++YE+HHGV+I RYIT+R
Sbjct: 256 KDVALARRFQPILVNEPTVEDTISILRGIKDKYEVHHGVRITDGALVAAAAYSNRYITDR 315
Query: 476 FLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKL 535
FLPDKAIDL+DEAA+ L+++ SKP ++ +D+ ++ +++E SL+ + D AS+ER KL
Sbjct: 316 FLPDKAIDLMDEAASSLRLQQESKPEDIMRLDQKIMTIQIELESLRKEKDVASRERREKL 375
Query: 536 EHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYG 595
E DL L+ + KELND+W +E+ + I+ + E+DR +E+E A+R+ + RA+EL++G
Sbjct: 376 ESDLKKLQDEVKELNDKWDKERSEIDAIKQTQAELDRARIELEVAQREGNFGRASELRFG 435
Query: 596 TMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLV 655
+ SL+ +L + E KS SLL + VT DIA +VS+ TGIP+S L EKLV
Sbjct: 436 VIPSLEAKLPKE----GEEAKSDGSLLHDSVTADDIANVVSRITGIPVSKLTSGHIEKLV 491
Query: 656 MLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALAD 715
+EE L + V GQD A+ +VADA+R RAGLS RP ASF F+GPTGVGKTEL K LA
Sbjct: 492 HMEETLREAVRGQDEALHAVADAVRLQRAGLSGENRPTASFFFLGPTGVGKTELCKKLAG 551
Query: 716 FLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIE 775
FLF+TE+A+VR DMSE+ EKH++SRL+GAP GYVGYE+ GQLTE VRR+PY+V+LFDE E
Sbjct: 552 FLFSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLLFDEFE 611
Query: 776 KAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKE--- 832
KAH+D+ +LLQ+LD+G +TD+QG V F N +++ TSN+G+ ++ +V KE
Sbjct: 612 KAHRDISALLLQVLDEGFLTDAQGHKVDFRNTIIVFTSNLGADILVGANPAVP-YKELAD 670
Query: 833 -AVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKK 891
A+ +K V+++ + + PEFLNRID +IVF+ L + + IV+I++ ++ RL ++
Sbjct: 671 GAISPEVKTAVMDVVQSRYPPEFLNRIDSFIVFKRLSLEALRDIVDIRLKELQGRLTDRR 730
Query: 892 IDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
I L + E L G+DP +GARP+ R+I + N +A I++G++K
Sbjct: 731 ITLEASGEVRDWLAEKGYDPKYGARPLNRLITVEIANSLADRIIRGELK 779
Score = 53 (23.7 bits), Expect = 1.1e-194, Sum P(2) = 1.1e-194
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 12 AALKSARHNKLSLAQSGSRAKS---ISTFTNFSNSLSRPP 48
A L S N ++L SG+R + I+T +++N PP
Sbjct: 36 ARLPSPSKNAITLTHSGARPRQLLPITTVRHYANGRPHPP 75
>CGD|CAL0002893 [details] [associations]
symbol:HSP78 species:5476 "Candida albicans" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0000002 "mitochondrial
genome maintenance" evidence=IEA] [GO:0010892 "positive regulation
of mitochondrial translation in response to stress" evidence=IEA]
[GO:0042026 "protein refolding" evidence=IEA] [GO:0050821 "protein
stabilization" evidence=IEA] [GO:0034605 "cellular response to
heat" evidence=IEA] [GO:0030150 "protein import into mitochondrial
matrix" evidence=IEA] [GO:0043335 "protein unfolding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0006950 GO:GO:0005759 GO:GO:0017111 EMBL:AACQ01000019
EMBL:AACQ01000018 eggNOG:COG0542 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 EMBL:AF399713 RefSeq:XP_721005.1 RefSeq:XP_721126.1
ProteinModelPortal:Q96UX5 SMR:Q96UX5 STRING:Q96UX5 GeneID:3637242
GeneID:3637414 KEGG:cal:CaO19.8501 KEGG:cal:CaO19.882
CGD:CAL0063839 Uniprot:Q96UX5
Length = 812
Score = 1870 (663.3 bits), Expect = 5.1e-193, P = 5.1e-193
Identities = 354/699 (50%), Positives = 507/699 (72%)
Query: 243 QNPEGKYQ-ALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGV 301
Q +G + ALEK+G+DLT+LA+ GKLDPVIGRD EIRR IQILSRRTKNNPV+IG G
Sbjct: 78 QTEQGDNRPALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGNAGT 137
Query: 302 GKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSN 361
GKTA+ EGLAQRI+RG+VP++++++++I+LD+A +++G YRGDFE +LK++LKEV + N
Sbjct: 138 GKTAVMEGLAQRIIRGEVPDSMKDKQIITLDLAGIISGAKYRGDFESKLKSILKEVEEKN 197
Query: 362 GQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALE 421
G++ILFIDE H ++G G G++DASN+LKP L RG+L GATT+ EYR Y+EKD AL
Sbjct: 198 GKVILFIDEFHLLMGLGKAEGSIDASNLLKPALARGKLSMCGATTIEEYRKYVEKDAALA 257
Query: 422 RRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKA 481
RRF V ++P+ E+TISILRGL+ERYE+HHGV+I RYIT+RFLPDKA
Sbjct: 258 RRFSPVTVNEPTGEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFLPDKA 317
Query: 482 IDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNS 541
IDLVDEA++ L+++ S+P + +DR ++ +E+E SL+ + D+ S +R KLE +L
Sbjct: 318 IDLVDEASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKHKLEKELEV 377
Query: 542 LKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQ 601
K + KEL DQW EK + +++ K E+++ E+E A R+ D RA+ ++Y ++ LQ
Sbjct: 378 KKSELKELTDQWESEKRAIDAVKNAKSELEKAKYELEQATREGDYARASRIQYASIPELQ 437
Query: 602 RQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVL 661
+++E KN E +LL + VT DIA ++SK TGIP+++L + E++KL+ + +L
Sbjct: 438 DKIQELSKN--ELAAKSSNLLHDSVTSEDIAGVISKMTGIPVNNLLKGEKDKLLDMNILL 495
Query: 662 HKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTE 721
+ V+GQD A+ +V+DA+R RAGL+ RPIASFMF+GPTG GKTEL K+LA FLFN +
Sbjct: 496 RQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTKSLAQFLFNDK 555
Query: 722 NALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDV 781
NA+VR DMSE+ EKH++SRL+G+PPGYVGYEE G+LTE VRR+PYSVVLFDE EKAH D+
Sbjct: 556 NAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYSVVLFDEFEKAHPDL 615
Query: 782 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQ 841
+LLQ+LD+G +TDS G+ + F N +++MTSNIG +L + +D + +K Q
Sbjct: 616 SKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADKNTYEDGH--INSEVKSQ 673
Query: 842 VVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAV 901
V+E R + PEFLNRID+ +VF L + +I++I++ + DRL K+I L T EA
Sbjct: 674 VLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDRLVDKRIILQLTDEAK 733
Query: 902 TLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
TLL +G+DP +GARP+ RV+++ + + +A+ ++KG ++
Sbjct: 734 TLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQ 772
>POMBASE|SPBC4F6.17c [details] [associations]
symbol:SPBC4F6.17c "mitochondrial heatshock protein
Hsp78 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000002 "mitochondrial genome maintenance" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0010892 "positive regulation of
mitochondrial translation in response to stress" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030150 "protein
import into mitochondrial matrix" evidence=ISO] [GO:0034605
"cellular response to heat" evidence=ISO] [GO:0042026 "protein
refolding" evidence=ISO] [GO:0043335 "protein unfolding"
evidence=ISO] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
PomBase:SPBC4F6.17c GO:GO:0005524 GO:GO:0050821 GO:GO:0034605
GO:GO:0005759 EMBL:CU329671 GO:GO:0051082 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0000002 GO:GO:0043335 GO:GO:0042026
GO:GO:0030150 eggNOG:COG0542 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 HOGENOM:HOG000218211 OMA:RAGLHSH HSSP:P63284
PIR:T40514 RefSeq:NP_596117.1 ProteinModelPortal:O74402 SMR:O74402
STRING:O74402 EnsemblFungi:SPBC4F6.17c.1 GeneID:2540898
KEGG:spo:SPBC4F6.17c OrthoDB:EOG4RR9RF NextBio:20802013
GO:GO:0010892 Uniprot:O74402
Length = 803
Score = 1859 (659.5 bits), Expect = 7.5e-192, P = 7.5e-192
Identities = 352/690 (51%), Positives = 508/690 (73%)
Query: 251 ALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGL 310
ALE+YG DLT LA+ GKLDPVIGR++EI+R IQILSRRTKNNP ++G GVGKTAI EGL
Sbjct: 93 ALEEYGTDLTALAKQGKLDPVIGREEEIQRTIQILSRRTKNNPALVGPAGVGKTAIMEGL 152
Query: 311 AQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDE 370
A RI+RG+VPE+++++++I LD+ +L++G +RGDFE+RLK+VL ++ + G++ILF+DE
Sbjct: 153 ASRIIRGEVPESMKDKRVIVLDLGALISGAKFRGDFEERLKSVLSDLEGAEGKVILFVDE 212
Query: 371 LHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCD 430
+H ++G G G++DASN+LKP L RG+L C GATTL EYR YIEKD AL RRFQ V +
Sbjct: 213 MHLLLGFGKAEGSIDASNLLKPALARGKLHCCGATTLEEYRKYIEKDAALARRFQAVMVN 272
Query: 431 QPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA 490
+PSV +TISILRGL+ERYE+HHGV+I RYIT+RFLPDKAIDLVDEA +
Sbjct: 273 EPSVADTISILRGLKERYEVHHGVRITDDALVTAATYSARYITDRFLPDKAIDLVDEACS 332
Query: 491 KLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELN 550
L+++ SKP EL +DR ++ +++E SL+ +TD S ER KLE L LK++Q +L+
Sbjct: 333 SLRLQQESKPDELRRLDRQIMTIQIELESLRKETDTTSVERREKLESKLTDLKEEQDKLS 392
Query: 551 DQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKN 610
W E+ L+ I+ K E+++ +E+E +R+ + RA+EL+Y + L+R + + EK
Sbjct: 393 AAWEEERKLLDSIKKAKTELEQARIELERTQREGNYARASELQYAIIPELERSVPKEEKT 452
Query: 611 LSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDI 670
L E +K S++ + VT DIA +VS+ TGIP ++L + ER+KL+ +E+ + K++IGQD
Sbjct: 453 LEE-KKP--SMVHDSVTSDDIAVVVSRATGIPTTNLMRGERDKLLNMEQTIGKKIIGQDE 509
Query: 671 AVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMS 730
A+K++ADA+R SRAGL + RP+ASF+F+GPTGVGKT L KALA+FLF+T+ A++R DMS
Sbjct: 510 ALKAIADAVRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMS 569
Query: 731 EYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLD 790
E+ EKH+++RL+G+PPGY+GYEE G+LTE VRR+PY+V+LFDE+EKAH D+ N+LLQ+LD
Sbjct: 570 EFQEKHTIARLIGSPPGYIGYEESGELTEAVRRKPYAVLLFDELEKAHHDITNLLLQVLD 629
Query: 791 DGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTF 850
+G +TDSQGR V F + +++MTSN+GS + V D V + V+++ ++ +
Sbjct: 630 EGFLTDSQGRKVDFRSTLIVMTSNLGSDIL------VADPSTTVTPKSRDAVMDVVQKYY 683
Query: 851 RPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFD 910
PEFLNRID+ IVF L K + IV ++++ V+ RL ++I L T+ A L G+
Sbjct: 684 PPEFLNRIDDQIVFNKLSEKNLEDIVNVRLDEVQQRLNDRRIILTVTEAARKWLAEKGYS 743
Query: 911 PNFGARPVKRVIQQLVENEIAVAILKGDIK 940
P +GARP+ R+IQ+ + N +A+ I++G+IK
Sbjct: 744 PAYGARPLNRLIQKRILNTMAMKIIQGEIK 773
>TAIR|locus:2157383 [details] [associations]
symbol:CLPC1 "CLPC homologue 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0031897 "Tic complex" evidence=TAS] [GO:0045037 "protein import
into chloroplast stroma" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IMP] [GO:0045036 "protein targeting to chloroplast"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0009706
"chloroplast inner membrane" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IDA] InterPro:IPR001270 InterPro:IPR001943
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151
Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GO:GO:0005618 GO:GO:0009570
GO:GO:0009658 GO:GO:0010380 GO:GO:0009535 GO:GO:0019538
EMBL:AB017063 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 HSSP:P03815 EMBL:AF022909 EMBL:AY102125 EMBL:AK227173
IPI:IPI00535976 PIR:T52292 RefSeq:NP_568746.1 UniGene:At.24774
UniGene:At.74761 UniGene:At.74764 UniGene:At.75059
ProteinModelPortal:Q9FI56 SMR:Q9FI56 IntAct:Q9FI56 STRING:Q9FI56
PRIDE:Q9FI56 EnsemblPlants:AT5G50920.1 GeneID:835165
KEGG:ath:AT5G50920 GeneFarm:797 TAIR:At5g50920 InParanoid:Q9FI56
KO:K03696 OMA:FHQLTRD PhylomeDB:Q9FI56 ProtClustDB:CLSN2689981
Genevestigator:Q9FI56 GO:GO:0031897 GO:GO:0045037 Uniprot:Q9FI56
Length = 929
Score = 936 (334.5 bits), Expect = 2.5e-188, Sum P(2) = 2.5e-188
Identities = 190/394 (48%), Positives = 271/394 (68%)
Query: 555 REKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEF 614
R + R +++E+ ++ E A R D +A L+ I L+ ++ + E
Sbjct: 499 RHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLR-DREIELRAEVSAIQAKGKEM 557
Query: 615 QKSGHSLLREE---VTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIA 671
K+ S EE VT+ DI IVS WTGIP+ + E ++L+ +EE LHKR+IGQD A
Sbjct: 558 SKA-ESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEA 616
Query: 672 VKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSE 731
VK+++ AIRR+R GL +P RPIASF+F GPTGVGK+EL KALA + F +E A++R+DMSE
Sbjct: 617 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 676
Query: 732 YMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDD 791
+ME+H+VS+L+G+PPGYVGY EGGQLTE VRRRPY+VVLFDEIEKAH DVFN++LQ+L+D
Sbjct: 677 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 736
Query: 792 GRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSV-----QDSKEAVYEVMKKQVVELA 846
GR+TDS+GRTV F N ++IMTSN+GS I + + + D K++ Y +K V E
Sbjct: 737 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 796
Query: 847 RQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGI 906
+Q FRPEFLNR+DE IVF+ L E+ +I +I + V +RLK+K+I+L T+ +
Sbjct: 797 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVD 856
Query: 907 LGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
G++P++GARP++R I +L+E+ +A +L +IK
Sbjct: 857 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 890
Score = 912 (326.1 bits), Expect = 2.5e-188, Sum P(2) = 2.5e-188
Identities = 222/568 (39%), Positives = 335/568 (58%)
Query: 1 MASRRLTKTTFAALKSARHNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPNDV 60
MA+R L ++T +L + N S SR +S+ + +S ++ + L N+
Sbjct: 3 MATRVLAQSTPPSLACYQRNVPSRGSGRSR-RSVKMMCS-QLQVSGLRMQGFMGLRGNNA 60
Query: 61 VSAKLSFTTVGFARK-FHS------STPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAAR 113
+ T+G +R+ FHS + P ++ + FTEKA + I+ A + AR
Sbjct: 61 LD------TLGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEAR 114
Query: 114 VNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPI 173
V TE ++ L+ + G+A ++L G + E I + A P
Sbjct: 115 RLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV-AVEIPF 173
Query: 174 VGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--FGRLLFNDIRLNEKDLKDAV 231
+L + + + ++ +++ EHLLL L + R+L N + + +++ V
Sbjct: 174 TPRAKRVLELSLEEAR-QLGHNYIGSEHLLLGLLREGEGVAARVLEN-LGADPSNIRTQV 231
Query: 232 KAVRGHQRVTDQNPEG-----KYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILS 286
+ G N G K LE+YG +LT+LA GKLDPV+GR +I R +QIL
Sbjct: 232 IRMVGENNEVTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 291
Query: 287 RRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDF 346
RRTKNNP +IGEPGVGKTAIAEGLAQRI GDVPET++ +K+I+LDM LVAGT YRG+F
Sbjct: 292 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEF 351
Query: 347 EKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATT 406
E+RLK +++E+ +S+ +IILFIDE+HT+IGAG GA+DA+N+LKP L RGEL+CIGATT
Sbjct: 352 EERLKKLMEEIRQSD-EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATT 410
Query: 407 LNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXX 466
L+EYR +IEKDPALERRFQ V +P+V+ TI IL+GLRERYE+HH ++
Sbjct: 411 LDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQ 470
Query: 467 XXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKN--DT 524
+YI++RFLPDKAIDL+DEA +++++ P E E+++ + ++ EK D
Sbjct: 471 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDF 530
Query: 525 DKAS--KERLSKLEHDLNSLKQKQKELN 550
+KA ++R +L ++++++ K KE++
Sbjct: 531 EKAGTLRDREIELRAEVSAIQAKGKEMS 558
>SGD|S000002666 [details] [associations]
symbol:HSP78 "Oligomeric mitochondrial matrix chaperone"
species:4932 "Saccharomyces cerevisiae" [GO:0005759 "mitochondrial
matrix" evidence=IEA;IDA] [GO:0010892 "positive regulation of
mitochondrial translation in response to stress" evidence=IMP]
[GO:0050821 "protein stabilization" evidence=IGI;IMP] [GO:0034605
"cellular response to heat" evidence=IGI;IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0051787 "misfolded protein binding"
evidence=IDA] [GO:0030150 "protein import into mitochondrial
matrix" evidence=IGI] [GO:0042026 "protein refolding"
evidence=IMP;IDA] [GO:0043335 "protein unfolding" evidence=IMP]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
SGD:S000002666 GO:GO:0005524 GO:GO:0050821 GO:GO:0034605
GO:GO:0005759 EMBL:BK006938 GO:GO:0016887 GO:GO:0000002 EMBL:Z70202
GO:GO:0043335 GO:GO:0042026 EMBL:Z68329 GO:GO:0030150 GO:GO:0051787
RefSeq:NP_010544.3 GeneID:851845 KEGG:sce:YDR258C eggNOG:COG0542
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
OMA:RAGLHSH GeneTree:ENSGT00390000012961 OrthoDB:EOG4RR9RF
GO:GO:0010892 EMBL:L16533 PIR:S67315 RefSeq:NP_058146.3
ProteinModelPortal:P33416 SMR:P33416 IntAct:P33416 STRING:P33416
PaxDb:P33416 PeptideAtlas:P33416 PRIDE:P33416 EnsemblFungi:YDR258C
GeneID:851851 KEGG:sce:YDR261W-B CYGD:YDR258c NextBio:969757
Genevestigator:P33416 GermOnline:YDR258C Uniprot:P33416
Length = 811
Score = 1815 (644.0 bits), Expect = 3.4e-187, P = 3.4e-187
Identities = 366/758 (48%), Positives = 524/758 (69%)
Query: 197 VSVEHLLLAFLSDDRFGRLLFNDIR---LNEKDLKD-AVKAVRGH--------QRVTDQN 244
V + + +F + R L +DI+ LNE + A+K+ G Q D N
Sbjct: 31 VQCKRSICSFNARPRVANKLLSDIKTNALNEVAISTCALKSSYGLPNFKRTYVQMRMDPN 90
Query: 245 PEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKT 304
+ + ALE++G +LT+LAR GKLDPVIGRD+EI R IQILSRRTKNNP +IG GVGKT
Sbjct: 91 QQPEKPALEQFGTNLTKLARDGKLDPVIGRDEEIARAIQILSRRTKNNPCLIGRAGVGKT 150
Query: 305 AIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQI 364
A+ +GLAQRIV G+VP++L+++ L++LD+ SL+AG YRG+FE+RLK VL+E+ K+NG++
Sbjct: 151 ALIDGLAQRIVAGEVPDSLKDKDLVALDLGSLIAGAKYRGEFEERLKKVLEEIDKANGKV 210
Query: 365 ILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRF 424
I+FIDE+H ++G G G+MDASN+LKP L RG LRCI ATTL+E++ IEKDPAL RRF
Sbjct: 211 IVFIDEVHMLLGLGKTDGSMDASNILKPKLARG-LRCISATTLDEFK-IIEKDPALSRRF 268
Query: 425 QQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDL 484
Q + ++PSV +TISILRGL+ERYE+HHGV+I RYIT+RFLPDKAIDL
Sbjct: 269 QPILLNEPSVSDTISILRGLKERYEVHHGVRITDTALVSAAVLSNRYITDRFLPDKAIDL 328
Query: 485 VDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQ 544
VDEA A L+++ SKP E+ ++DRA++K+++E SLK +TD S ER LE DL
Sbjct: 329 VDEACAVLRLQHESKPDEIQKLDRAIMKIQIELESLKKETDPVSVERREALEKDLEMKND 388
Query: 545 KQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQL 604
+ L W E+ + I++ K +++ +E+E +R+ D +A+EL+Y + L++++
Sbjct: 389 ELNRLTKIWDAERAEIESIKNAKANLEQARIELEKCQREGDYTKASELRYSRIPDLEKKV 448
Query: 605 EEAEKNLSEFQKSGH--SLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLH 662
LSE K G +LL + VT DI+++V+K TGIP ++ + ++++L+ +E L
Sbjct: 449 A-----LSEKSKDGDKVNLLHDSVTSDDISKVVAKMTGIPTETVMKGDKDRLLYMENSLK 503
Query: 663 KRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTEN 722
+RV+GQD A+ +++DA+R RAGL+ RPIASFMF+GPTG GKTEL KALA+FLF+ E+
Sbjct: 504 ERVVGQDEAIAAISDAVRLQRAGLTSEKRPIASFMFLGPTGTGKTELTKALAEFLFDDES 563
Query: 723 ALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVF 782
++R DMSE+ EKH+VSRL+GAPPGYV E GGQLTE VRR+PY+VVLFDE EKAH DV
Sbjct: 564 NVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLTEAVRRKPYAVVLFDEFEKAHPDVS 623
Query: 783 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQV 842
+LLQ+LD+G++TDS G V F N +++MTSNIG +L + D K + K +V
Sbjct: 624 KLLLQVLDEGKLTDSLGHHVDFRNTIIVMTSNIGQDILLNDTKLGDDGK--IDTATKNKV 681
Query: 843 VELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVT 902
+E ++++ PEF+NRID+ +VF L K + IV+I++ ++DRL +K++ + T EA
Sbjct: 682 IEAMKRSYPPEFINRIDDILVFNRLSKKVLRSIVDIRIAEIQDRLAEKRMKIDLTDEAKD 741
Query: 903 LLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
L G+D +GARP+ R+I + + N +A +LKG I+
Sbjct: 742 WLTDKGYDQLYGARPLNRLIHRQILNSMATFLLKGQIR 779
>ASPGD|ASPL0000062455 [details] [associations]
symbol:AN1163 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS00871 SMART:SM00382 GO:GO:0005524 EMBL:AACD01000016
EMBL:BN001308 GO:GO:0017111 eggNOG:COG0542 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211 OMA:RAGLHSH
OrthoDB:EOG4RR9RF RefSeq:XP_658767.1 ProteinModelPortal:Q5BE67
SMR:Q5BE67 STRING:Q5BE67 EnsemblFungi:CADANIAT00001463
GeneID:2876935 KEGG:ani:AN1163.2 Uniprot:Q5BE67
Length = 800
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 353/698 (50%), Positives = 506/698 (72%)
Query: 246 EGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTA 305
E + ALE+YG DLT A++GKLDPVIGRD EI R IQ+LSRRTKNNPV+IG G GKTA
Sbjct: 79 EPEKAALEQYGVDLTAKAKAGKLDPVIGRDSEIHRTIQVLSRRTKNNPVLIGAAGTGKTA 138
Query: 306 IAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQII 365
+ EGLAQRIV+GDVPE+++ +++I+LD+ SL+AG +RGDFE+RLK+VLKEV ++ G +I
Sbjct: 139 VLEGLAQRIVQGDVPESIKGKRVIALDLGSLIAGAKFRGDFEERLKSVLKEVEEAQGGVI 198
Query: 366 LFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQ 425
LFIDELHT++G G G++DASN+LKP L RGEL+C GATTLNEYR IEKD AL RRFQ
Sbjct: 199 LFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYR-LIEKDVALARRFQ 257
Query: 426 QVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLV 485
+ +PSV TISILRG++++YE+HHGV+I RYIT+RFLPDKAIDLV
Sbjct: 258 PIQVGEPSVAATISILRGIKDKYEVHHGVRITDGALVAAATYSNRYITDRFLPDKAIDLV 317
Query: 486 DEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQK 545
DEAA+ L+++ SKP + E+DR + +++E SL+ +TD +S+ER KLE DL + +++
Sbjct: 318 DEAASALRLQQESKPDIIRELDRDITTIQIELESLRKETDISSRERREKLEEDLKAKREE 377
Query: 546 QKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLE 605
++L + W +EK + ++ KEE++R E+E A+R+ + +A EL+Y + SL+ +L
Sbjct: 378 SRKLTEIWEKEKAEIESLKRTKEELERTRFELEQAQREGNFAKAGELRYSKIPSLEAKLP 437
Query: 606 EAEKNLSEFQKSGHS-LLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKR 664
+ + QK S L+ + VT DI +VS+ TGIP+S L E EKL+ +E+ L +
Sbjct: 438 KE----GDEQKDPQSTLIHDSVTADDIGAVVSRTTGIPVSKLMAGEVEKLIHMEDTLRQS 493
Query: 665 VIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENAL 724
V GQD A+ +VA+A+R RAGLS RP+ASFMF+GPTGVGKTEL K +A+FLF+TE A+
Sbjct: 494 VRGQDEALSAVANAVRMQRAGLSGENRPLASFMFLGPTGVGKTELCKKMAEFLFSTETAV 553
Query: 725 VRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNI 784
VR DMSE+ EKH++SRL+G+P GYVGY++ GQLTE VRR+PY+V+LFDE EKAH+D+ +
Sbjct: 554 VRFDMSEFQEKHTISRLIGSPAGYVGYDDAGQLTEAVRRKPYAVLLFDEFEKAHRDISAL 613
Query: 785 LLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYIL--ETLQSVQDSKEA-VYEVMKKQ 841
LLQ+LD+G +TD+QG V F N ++++TSN+G+ ++ + + S + S + + +KK
Sbjct: 614 LLQVLDEGFLTDAQGHKVDFRNTLIVLTSNLGADLLIGADPIHSSKASTDGEITPELKKA 673
Query: 842 VVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAV 901
V+++ +Q + PEFLNRIDE+IVF+ L + + IV+I++ ++ RL +++ L E
Sbjct: 674 VMDVVQQAYPPEFLNRIDEFIVFKRLSREALRDIVDIRIKELQSRLDDRRMTLQVDDEIK 733
Query: 902 TLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
L G+DP FGARP+ R+I + + N +A I++G++
Sbjct: 734 DWLCEKGYDPKFGARPLNRLISKEIGNRLADKIIRGEV 771
>ASPGD|ASPL0000053926 [details] [associations]
symbol:hsp104 species:162425 "Emericella nidulans"
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0006950 EMBL:BN001308 GO:GO:0017111 EMBL:AACD01000013
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
OrthoDB:EOG4T4H3H RefSeq:XP_658462.1 ProteinModelPortal:Q5BF22
SMR:Q5BF22 STRING:Q5BF22 EnsemblFungi:CADANIAT00001800
GeneID:2876634 KEGG:ani:AN0858.2 OMA:GEASEDM Uniprot:Q5BF22
Length = 927
Score = 1805 (640.5 bits), Expect = 3.9e-186, P = 3.9e-186
Identities = 376/820 (45%), Positives = 545/820 (66%)
Query: 136 LARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDD 195
L R+++ +A D + + + K P + + F +L+ A + K +D
Sbjct: 61 LFRQVVERAHGDVQLLHRGLMKRLVKLPSQDPPPETRSISAPFRKVLTAAADLSKTQKDS 120
Query: 196 FVSVEHLLLAFLSDDRFGRLLFNDIRL-NEKDLKDAVKAVRGHQRVTDQ--NPEGKYQAL 252
+++V+HL+ A D L D + N K + +A++ +RG +RV + + E + + L
Sbjct: 121 YIAVDHLIQAVCQDSTVQAAL-KDANVPNVKLIDNAIQQIRGTRRVDSKTADAESENENL 179
Query: 253 EKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQ 312
+K+ D+T LAR GK+DPVIGR++EIRR I+ILSRRTKNNPV+IGEPGVGKT I EGLA+
Sbjct: 180 KKFTIDMTALAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAR 239
Query: 313 RIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELH 372
RIV D+P +L KL+SLD+ SLVAG+ YRG+FE+RLK VLKE+ +S I+LF+DE+H
Sbjct: 240 RIVNADIPASLSQCKLLSLDVGSLVAGSKYRGEFEERLKGVLKEIEESKETIVLFVDEIH 299
Query: 373 TIIGAG-NQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQ 431
++GAG + G MDA+N+LKPML RG+L CIGATTL EYR YIEKD A ERRFQQV +
Sbjct: 300 LLMGAGASGEGGMDAANLLKPMLARGQLHCIGATTLGEYRKYIEKDAAFERRFQQVLVKE 359
Query: 432 PSVENTISILRGLRERYELHHG-VKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA 490
P+V TISILRGL+E+YE+HHG V+I RY+T R LPD A+DL+DEAAA
Sbjct: 360 PTVSETISILRGLKEKYEVHHGSVRILDAAIVTAATLAARYLTARRLPDSAVDLIDEAAA 419
Query: 491 KLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELN 550
+++ S+P LD ++R +L++E +LK + D+ASK RL E + ++ ++ + +
Sbjct: 420 AVRVARESEPEALDNLERKHRQLQIEIHALKREKDEASKARLQAAEQEAANVIEELRPMR 479
Query: 551 DQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKN 610
++ EK I+ K ++D + + E AER D AA+LKY + Q+ +E EK
Sbjct: 480 QKYESEKQRNKAIQDAKTKLDNLKNKQEEAERSGDTETAADLKYYAIPETQQHIEMLEKQ 539
Query: 611 LSEFQK--------SGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLH 662
+E + +G LL +EV I EIV++WTGIP++ L+ SE++KL+ +E+ L
Sbjct: 540 RAEADEERRNRQGDAGEPLLADEVGPDQINEIVARWTGIPVTRLKTSEKDKLLEMEKHLG 599
Query: 663 KRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTEN 722
K V+GQ AVKS++DAIR R+GLS+P P SF+F GP+G GKT L KALA+FLF+
Sbjct: 600 KIVVGQREAVKSISDAIRLQRSGLSNPNSP-PSFLFCGPSGTGKTLLTKALAEFLFDDPK 658
Query: 723 ALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVF 782
+++R DMSEY E+HS+SR++GAPPGYVG++ GGQLTE +RRRP+S++LFDE+EKA ++V
Sbjct: 659 SMIRFDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTESLRRRPFSILLFDEVEKAAKEVL 718
Query: 783 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQV 842
+LLQL+DDGRITD QGR V NC+V+MTSN+G+ Y+ + +D K + ++ V
Sbjct: 719 TVLLQLMDDGRITDGQGRVVDARNCIVVMTSNLGAEYLARP--TTKDGK--IDPQTRELV 774
Query: 843 VELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQ--KKIDLHYTKEA 900
+ R F PEFLNRI ++F L KEI KIV+++++ V+ RL+Q + + + T+E
Sbjct: 775 MGALRNYFLPEFLNRISSIVIFNRLTKKEIRKIVDLRLDEVQRRLEQNGRNVVIECTEEV 834
Query: 901 VTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
LG G+ P +GARP+ R+I++ V N +AV IL+G I+
Sbjct: 835 KDYLGQSGYSPAYGARPLGRIIEREVLNRLAVLILRGSIQ 874
>UNIPROTKB|G4N778 [details] [associations]
symbol:MGG_06459 "Hsp98-like protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0043581 EMBL:CM001234 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 RefSeq:XP_003717107.1
ProteinModelPortal:G4N778 SMR:G4N778 EnsemblFungi:MGG_06459T0
GeneID:2684614 KEGG:mgr:MGG_06459 Uniprot:G4N778
Length = 926
Score = 1804 (640.1 bits), Expect = 5.0e-186, P = 5.0e-186
Identities = 364/819 (44%), Positives = 553/819 (67%)
Query: 136 LARRILTKAGQDNTKVLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDD 195
L R+++ +A D + +A + + + P + +F L+ A ++K +D
Sbjct: 61 LLRQVVERAQGDPQLLDRALKKTLVRLPSQDPPPENVTMSPSFNNLIRKAMELQKVQKDS 120
Query: 196 FVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQ--NPEGKYQALE 253
F++V+HL+ A D F L K ++DAV+ +RG +RV + + E +++ L
Sbjct: 121 FIAVDHLISALAEDVSFQNCLKEANVPKHKLIQDAVQTIRGTKRVDSKTADTEEEHENLS 180
Query: 254 KYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQR 313
K+ D+T +AR GK+DPVIGR++EIRR ++ILSRRTKNNPV+IGEPGVGKT + EGLAQR
Sbjct: 181 KFTIDMTAMAREGKIDPVIGREEEIRRVVRILSRRTKNNPVLIGEPGVGKTTVVEGLAQR 240
Query: 314 IVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHT 373
IV DVP+ L KL+SLD+ +LVAG+ YRG+FE+R+K VLKE+ ++ I+LF+DE+H
Sbjct: 241 IVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIEEAKEMIVLFVDEIHL 300
Query: 374 IIGAGNQS-GAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQP 432
++GAG+ G MDA+N+LKPML RG+L CIGATTL EYR YIEKD A ERRFQQV +P
Sbjct: 301 LMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEP 360
Query: 433 SVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKL 492
++ TISILRGL+E+YE+HHGV I RY+T R +PD A+DL+DEAAA +
Sbjct: 361 TINETISILRGLKEKYEVHHGVTIADSALVASANLAARYLTTRRMPDSAVDLIDEAAAAV 420
Query: 493 KMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQ 552
++ S+P +D ++R + +L++E +L + D+ASK RL+ + + +++++ + L ++
Sbjct: 421 RVARESQPEIIDSLERKLRQLKIEIHALSREKDEASKGRLALAKQEAQNVEEELRPLREK 480
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKN-- 610
+ E+ I+ K ++D++ ++ME A R D RAA+L+Y + + +++ EK+
Sbjct: 481 YESERKRGKDIQEAKMKLDQLKVKMEDASRMGDHARAADLQYYAIPEQENVIKQLEKDKA 540
Query: 611 -----LSEFQKSGH--SLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHK 663
+S ++ H S++ + V I EIVS+WTGIP++ L+ SE+EKL+ +E+ L K
Sbjct: 541 AADAAISAQAQTDHGGSMITDVVGPDQINEIVSRWTGIPVTRLKTSEKEKLIQMEKALGK 600
Query: 664 RVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENA 723
V+GQ AV+SV++AIR R+GLS+P +P SF+F GP+G GKT L KALA+FLF+ A
Sbjct: 601 LVVGQKEAVQSVSNAIRLQRSGLSNPNQP-PSFLFCGPSGTGKTLLTKALAEFLFDDSKA 659
Query: 724 LVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFN 783
++R+DMSEY E+HS+SR++GAPPGYVG++ GGQLTE +RR+P+S++LFDE+EKA ++V
Sbjct: 660 MIRLDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRKPFSILLFDEVEKAAKEVLT 719
Query: 784 ILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVV 843
+LLQL+DDGRITD QGR + NC+V+MTSN+G+ ++ + +D K + ++ V+
Sbjct: 720 VLLQLMDDGRITDGQGRVIDARNCIVVMTSNLGAEFLARP--AGKDGK--IDPTTRELVM 775
Query: 844 ELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRL--KQKKIDLHYTKEAV 901
R F PEFLNRI ++F L KEI KIV+++++ ++ RL + I + + EA
Sbjct: 776 NALRNYFLPEFLNRISSTVIFNRLTRKEIRKIVDLRISEIQKRLADNNRNIAISVSNEAK 835
Query: 902 TLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
LG G+ P +GARP+ R+I+Q V N++AV IL+G I+
Sbjct: 836 DYLGNAGYSPAYGARPLARLIEQEVLNKLAVLILRGSIQ 874
>TIGR_CMR|CJE_0616 [details] [associations]
symbol:CJE_0616 "ATP-dependent chaperone protein ClpB"
species:195099 "Campylobacter jejuni RM1221" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0042026 "protein refolding"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
KO:K03695 RefSeq:YP_178631.1 ProteinModelPortal:Q5HVQ4 SMR:Q5HVQ4
STRING:Q5HVQ4 GeneID:3232061 KEGG:cjr:CJE0616 PATRIC:20042952
OMA:DFLTDNM ProtClustDB:CLSK872314
BioCyc:CJEJ195099:GJC0-631-MONOMER Uniprot:Q5HVQ4
Length = 857
Score = 1801 (639.0 bits), Expect = 1.0e-185, P = 1.0e-185
Identities = 381/832 (45%), Positives = 551/832 (66%)
Query: 111 AARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGATS 170
A N +VV HL+ AL + +IL K + + ISK +
Sbjct: 23 AIHSKNTEVVPL-HLLWALSVDSTSILNQILNKLNISKEALELEIKSRISKLATSSNVNR 81
Query: 171 GPIVGSNFGL-LLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLL--FNDIRLNEKDL 227
I SN + L NA+ + D ++SV+ L++ +L F D+R +K+L
Sbjct: 82 ENIRFSNELINSLENAKGLMSANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKEL 141
Query: 228 KDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSR 287
+ ++R +++ + + +L K+G DLT A GKLDPVIGR++EI R +QIL R
Sbjct: 142 E----SLRAGRKMDSKTSDETLDSLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIR 197
Query: 288 RTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFE 347
+TKNNP+++GEPGVGKTAI E LAQRI++ DVP++LQN+K+I+LDM++L+AG YRG+FE
Sbjct: 198 KTKNNPILLGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFE 257
Query: 348 KRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTL 407
RLKAV+ EV KS IILFIDE+HTI+GAG G+MDA+N+LKP L RGEL IGATTL
Sbjct: 258 DRLKAVVNEVIKSEN-IILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTL 316
Query: 408 NEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXX 467
EYR Y EKD AL+RRFQ V +PSV +++LRG++E+ E+HH V I
Sbjct: 317 KEYRKYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKL 376
Query: 468 XXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKA 527
RYIT+RFLPDKAIDL+DEAAA+LKM+I S+P L ++ + + LE+E +LK + D+
Sbjct: 377 SKRYITDRFLPDKAIDLIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEK 436
Query: 528 SKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLN 587
+++RL ++ +L +LK+KQ LN Q+ EK + I + K+EID + E A+ +
Sbjct: 437 NQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQ 496
Query: 588 RAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQ 647
+AAEL+YG + SL++++E E + ++G LL+ +V + +A I+SKWTGI + +
Sbjct: 497 KAAELEYGKIPSLEKEVEILEDKWKKMSENG-VLLKNQVDEDLVAGILSKWTGISVQKML 555
Query: 648 QSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKT 707
SE++K + +E+ L + VIGQD A+ ++A AI+R++AGL+ +PI SF+F+GPTGVGKT
Sbjct: 556 TSEKQKFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKT 615
Query: 708 ELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYS 767
+ KALA FLF+ E A++R DMSE+MEKHSVSRL+GAPPGY+G+EEGG+LTE VRR+PYS
Sbjct: 616 QSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYS 675
Query: 768 VVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSV 827
V+LFDE+EKAH+DVFN+LL +LDD R TDS+G TV F N ++I+TSNI S I+ S
Sbjct: 676 VLLFDEVEKAHKDVFNVLLGILDDSRATDSKGVTVDFKNTIIILTSNIASSAIMNL--SG 733
Query: 828 QDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRL 887
++ ++AV +K F+PEFLNR+D+ I F PL E +IV++ ++ L
Sbjct: 734 KEQEDAVKNELKN--------FFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSL 785
Query: 888 KQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
+ K I ++ A L+ GFDP+FGARP++R I L+E++++ IL ++
Sbjct: 786 ENKGIKASLSENAALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADEL 837
>UNIPROTKB|P0A522 [details] [associations]
symbol:clpC "Probable ATP-dependent Clp protease
ATP-binding subunit" species:1773 "Mycobacterium tuberculosis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006457 "protein folding" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0044183 "protein binding involved in protein
folding" evidence=IMP] InterPro:IPR001270 InterPro:IPR001943
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151
Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS50151 SMART:SM00382 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0016887 GO:GO:0044183 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:FHQLTRD PIR:E70954
RefSeq:NP_338246.1 RefSeq:YP_006517086.1 RefSeq:YP_177995.1
ProteinModelPortal:P0A522 SMR:P0A522 IntAct:P0A522 PRIDE:P0A522
EnsemblBacteria:EBMYCT00000002289 EnsemblBacteria:EBMYCT00000069514
GeneID:13317205 GeneID:885104 GeneID:922793 KEGG:mtc:MT3703
KEGG:mtu:Rv3596c KEGG:mtv:RVBD_3596c PATRIC:18129893
TubercuList:Rv3596c ProtClustDB:CLSK2391256 Uniprot:P0A522
Length = 848
Score = 903 (322.9 bits), Expect = 7.8e-183, Sum P(2) = 7.8e-183
Identities = 206/483 (42%), Positives = 298/483 (61%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATE 156
FT++A +V A + AR+ N + TEH++ L+ + +G+A + L G V E
Sbjct: 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVE 64
Query: 157 DFISKQPKVTGATSGPIVGS-NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--FG 213
+ I + + A SG I + +L + R ++ +++ EH+LL + +
Sbjct: 65 EIIGQGQQ---APSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAA 121
Query: 214 RLLFN---DI-RLNEKDL--------KDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTE 261
++L ++ R+ ++ + K+A +A G + +P L+++G +LT
Sbjct: 122 QVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSL-VLDQFGRNLTA 180
Query: 262 LARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPE 321
A GKLDPVIGR+ EI R +Q+LSRRTKNNPV+IGEPGVGKTA+ EGLAQ IV G+VPE
Sbjct: 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240
Query: 322 TLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQS 381
TL++++L +LD+ SLVAG+ YRGDFE+RLK VLKE+ + G IILFIDELHT++GAG
Sbjct: 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIN-TRGDIILFIDELHTLVGAGAAE 299
Query: 382 GAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISIL 441
GA+DA+++LKP L RGEL+ IGATTL+EYR YIEKD ALERRFQ V +P+VE+TI IL
Sbjct: 300 GAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEIL 359
Query: 442 RGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPI 501
+GLR+RYE HH V I RYI +RFLPDKAIDL+DEA A++++ + P
Sbjct: 360 KGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP 419
Query: 502 ELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQW-SREKDLM 560
+L E D + + EK S D E+ + L +L ++ E QW S + D++
Sbjct: 420 DLREFDEKIAEARREKESA---IDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVV 476
Query: 561 SRI 563
+ +
Sbjct: 477 AEV 479
Score = 893 (319.4 bits), Expect = 7.8e-183, Sum P(2) = 7.8e-183
Identities = 190/375 (50%), Positives = 258/375 (68%)
Query: 563 IRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLL 622
+R E+I E E+A D +AA L+ +L Q E EK +SG +
Sbjct: 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREK-TLVAQRAEREKQW----RSGDLDV 475
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
EV D IAE++ WTGIP+ L ++E +L+ +EE LHKR+IGQ+ AVK+V+ AIRR+
Sbjct: 476 VAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRT 535
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL DP RP SF+F GP+GVGKTEL KALA+FLF ++AL++IDM E+ ++ + SRL
Sbjct: 536 RAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLF 595
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVGYEEGGQLTE VRR+P+SVVLFDEIEKAHQ+++N LLQ+L+DGR+TD QGRTV
Sbjct: 596 GAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTV 655
Query: 803 SFTNCVVIMTSNIGSHYILET--LQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDE 860
F N V+I TSN+G+ I + L + E YE MK++V + ++ FRPEFLNRID+
Sbjct: 656 DFKNTVLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDD 715
Query: 861 YIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKR 920
IVF L +EI ++V++ ++RV +LK K + L T A LL GFDP GARP++R
Sbjct: 716 IIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRR 775
Query: 921 VIQQLVENEIAVAIL 935
IQ+ +E++++ IL
Sbjct: 776 TIQREIEDQLSEKIL 790
>TIGR_CMR|DET_0057 [details] [associations]
symbol:DET_0057 "ATP-dependent Clp protease, ATP-binding
subunit ClpC" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 GO:GO:0008233
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 RefSeq:YP_180810.1 ProteinModelPortal:Q3ZAD9 SMR:Q3ZAD9
STRING:Q3ZAD9 GeneID:3229040 KEGG:det:DET0057 PATRIC:21607213
OMA:NYINTEH ProtClustDB:CLSK836766
BioCyc:DETH243164:GJNF-57-MONOMER Uniprot:Q3ZAD9
Length = 824
Score = 901 (322.2 bits), Expect = 2.6e-182, Sum P(2) = 2.6e-182
Identities = 201/485 (41%), Positives = 303/485 (62%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+F+E+A + A + A+ N + TEH++ L+ +++G+A R+L + KV A
Sbjct: 7 KFSERARRVLTYAQEEAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLAKVRSAV 66
Query: 156 EDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRL 215
E + + ATS + S ++ + + +++ EHLLL L +
Sbjct: 67 EFILGRGEHP--ATSETGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGEGAAA 124
Query: 216 -LFNDIRLNEKDLKDAVKAV--RG-HQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPV 271
+ + + ++ V + +G ++ + + L++ G DLT AR+GKLDPV
Sbjct: 125 GVLESFGVTVEKVRTEVGRILNQGLNKPKAGRATPSRTPQLDQLGFDLTAAARTGKLDPV 184
Query: 272 IGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISL 331
IGR EI R +QILSRRTKNNP +IGEPGVGKT+I EGLAQRIV GDVPETL+ + +ISL
Sbjct: 185 IGRAKEIERVVQILSRRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKHIISL 244
Query: 332 DMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLK 391
D+ASLVAGT YRG+FE+RLK V++E+ K+ G IILFIDE HT++GAG GA+DA+N+LK
Sbjct: 245 DVASLVAGTKYRGEFEERLKKVIEEI-KTAGNIILFIDEFHTMVGAGAAEGAVDAANILK 303
Query: 392 PMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELH 451
P L RGE++ IGATTL+++R Y+E+D A ERRFQ V ++P++E+T+SILRG++ERYE H
Sbjct: 304 PSLARGEVQVIGATTLDDFRKYVERDAAFERRFQPVLVEEPAIEDTLSILRGIKERYEEH 363
Query: 452 HGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAV- 510
H + I RYI +RFLPDKAIDLVDEAA++++++ +KP+ L E+ +A+
Sbjct: 364 HKLIISEEAIVAAANMAARYIPDRFLPDKAIDLVDEAASRVRIKKRTKPVSLKEM-KAIE 422
Query: 511 --LKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKE 568
+ + E D AS+ R E +L + +K + + D+W E+ + + +E
Sbjct: 423 DSYRRDKEAALATQQYDYASELR----ERELQ-IAEKIRRMEDEWQNEQAMDKPVVG-EE 476
Query: 569 EIDRV 573
+I +V
Sbjct: 477 DIAQV 481
Score = 890 (318.4 bits), Expect = 2.6e-182, Sum P(2) = 2.6e-182
Identities = 186/391 (47%), Positives = 272/391 (69%)
Query: 561 SRIRSIKEEIDRVNL-EMEAAERDYDLNRAAEL---KYGTMISL-QRQLEEAEK--NLSE 613
SR+R IK+ V+L EM+A E Y ++ A L +Y L +R+L+ AEK + +
Sbjct: 402 SRVR-IKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIRRMED 460
Query: 614 FQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVK 673
++ ++ + V + DIA++VS WTG+PL L E E+L+ +EE LH+R+IGQ+ A+
Sbjct: 461 EWQNEQAMDKPVVGEEDIAQVVSMWTGVPLVQLTGDETERLLHMEEALHERIIGQEEAIV 520
Query: 674 SVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYM 733
+++ A+RR+RAGL DP PI +F+F+GPTGVGKTEL +ALA F+F +E+ALVR+DMSE+M
Sbjct: 521 TISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARALAQFMFGSEDALVRLDMSEFM 580
Query: 734 EKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGR 793
EK +VSRLVGAPPGYVGY+EGGQLTE VRR+ Y ++L DEIEKAH DVFNILLQ+ DDG
Sbjct: 581 EKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGH 640
Query: 794 ITDSQGRTVSFTNCVVIMTSNIGSHYILE---TL---QSVQDSK--EAVYEVMKKQVVEL 845
+TD++GR V F N ++IMTSNIG+ I + T+ +SK + +E MK +++
Sbjct: 641 LTDTKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGE 700
Query: 846 ARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLG 905
+++FRPEFLNRID +VF L+ ++I IV++ + V ++ +K I L T A LLG
Sbjct: 701 LKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDLMLKSVIKQMSEKGIGLEVTDSAKDLLG 760
Query: 906 ILGFDPNFGARPVKRVIQQLVENEIAVAILK 936
G+D +GARP++R IQ ++E+ ++ +L+
Sbjct: 761 KKGYDEVYGARPLRRTIQTMLEDRLSEDLLR 791
Score = 69 (29.3 bits), Expect = 2.1e-94, Sum P(2) = 2.1e-94
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 95 TEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQA 154
T T +A + I +D AR + TEHL+ LL + +G A +L G KV
Sbjct: 81 TGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVRTE 140
Query: 155 TEDFISK---QPKVTGAT 169
+++ +PK AT
Sbjct: 141 VGRILNQGLNKPKAGRAT 158
>CGD|CAL0001410 [details] [associations]
symbol:HSP104 species:5476 "Candida albicans" [GO:0051085
"chaperone mediated protein folding requiring cofactor"
evidence=IGI] [GO:0042623 "ATPase activity, coupled"
evidence=IGI;ISS] [GO:0070370 "cellular heat acclimation"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0034605 "cellular response to heat" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0072380 "TRC
complex" evidence=IEA] [GO:0070389 "chaperone cofactor-dependent
protein refolding" evidence=IEA] [GO:0070414 "trehalose metabolism
in response to heat stress" evidence=IEA] [GO:0034975 "protein
folding in endoplasmic reticulum" evidence=IEA] [GO:0001319
"inheritance of oxidatively modified proteins involved in
replicative cell aging" evidence=IEA] [GO:0043335 "protein
unfolding" evidence=IEA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0051087 "chaperone binding" evidence=IEA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0009986 GO:GO:0009405
EMBL:AACQ01000073 GO:GO:0044011 GO:GO:0042623 GO:GO:0051085
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
GO:GO:0070370 RefSeq:XP_716146.1 ProteinModelPortal:Q5A376
SMR:Q5A376 STRING:Q5A376 GeneID:3642228 KEGG:cal:CaO19.13747
CGD:CAL0061863 Uniprot:Q5A376
Length = 899
Score = 1666 (591.5 bits), Expect = 1.4e-174, Sum P(2) = 1.4e-174
Identities = 348/769 (45%), Positives = 506/769 (65%)
Query: 179 GLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQ 238
G +L+ A +IK++ +D +V+ +H+LLA L D + +F + ++ +K +RG Q
Sbjct: 91 GQVLTKANKIKQQQKDSYVAQDHILLALLEDQSI-KDIFKEAGMSVDTIKTQAIELRGSQ 149
Query: 239 RVTDQNPEGK--YQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVII 296
R+ + + Y+ L KY D TE AR GK+DPVIGR++EIRR I++L+RR+K+N V+I
Sbjct: 150 RIDSRQADSSSSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLI 209
Query: 297 GEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKE 356
G+ GVGKT+I EG+AQRIV GDVP L +L +LD+ +L AG Y+G+FE+RLK VL E
Sbjct: 210 GDAGVGKTSIVEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNE 269
Query: 357 VTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEK 416
+ KS IILFIDE+H ++G G DA+N+LKPML RG L CIGATT EYR +I K
Sbjct: 270 IEKSKEFIILFIDEIHMLMGDGKS----DAANLLKPMLARGALHCIGATTFAEYRKFISK 325
Query: 417 DPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERF 476
D A ERRFQ++ +V+ T++ILRG++ +YE+HHGV+I RY+T R
Sbjct: 326 DGAFERRFQKIDVPAATVQETVAILRGIQPKYEIHHGVRILDSALVTAAQLASRYLTYRA 385
Query: 477 LPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAV--LKLEMEKLSLKNDTDKASKERLSK 534
LPD A+DLVDE+AA + + SKP ELD ++R + + +E+ L D D ASKERL+
Sbjct: 386 LPDSAVDLVDESAAAVAVARDSKPEELDTLERQLHLVDVEINALERDKDADSASKERLNL 445
Query: 535 LEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKY 594
+ L++K LN+++ +E+ ++ + K ++D + ++ + AER YD AA+L+Y
Sbjct: 446 AKKKKAELEEKIGPLNERYRQERASHEQLTAAKRKLDELEIKAQDAERRYDTATAADLRY 505
Query: 595 GTMISLQRQLEEAEKNLSEFQKSG-HSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREK 653
+ +Q+Q+EE E ++E + S SLL+ V I E ++ TGIP++ L Q+E K
Sbjct: 506 FAIPDIQKQIEELEVKVAEEEASNLDSLLKNAVGPEQICETAARLTGIPVTKLSQAENNK 565
Query: 654 LVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKAL 713
L+ +E L K V+GQ AVK+V++AIR R+GL++P +P SF+F+G +G GKTEL K L
Sbjct: 566 LINMEAELSKEVVGQSEAVKAVSNAIRLRRSGLANPNQP-PSFLFLGLSGSGKTELAKKL 624
Query: 714 ADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDE 773
A FLF E A++RID SE +K S S+L+GA PGYVGYEEGG LTE + RRPYSVVL DE
Sbjct: 625 AGFLFADEKAIIRIDCSELGDKWSASKLLGAAPGYVGYEEGGILTEPLIRRPYSVVLLDE 684
Query: 774 IEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEA 833
+EKA +V +LLQ+LDDGR+T SQG+ V+ +N + IMTSN+G++YI + + SK
Sbjct: 685 VEKAAPEVLTVLLQILDDGRVTSSQGKLVNCSNAIFIMTSNLGANYI----NAAKGSK-- 738
Query: 834 VYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQ--KK 891
+ K+ V++ R FRPEF+NRI +VF L K ISKIV+I+++ +++R K
Sbjct: 739 IDANTKEHVMDAVRAHFRPEFINRISSIVVFNRLSRKAISKIVKIRLSEIENRFTANGKA 798
Query: 892 IDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
I L +A+ L G+ P+ GARP+ R+IQ + N +AV +LKG I+
Sbjct: 799 IQLKLDDDAMEYLCKNGWSPDLGARPLNRLIQNEILNRLAVMLLKGQIQ 847
Score = 52 (23.4 bits), Expect = 1.4e-174, Sum P(2) = 1.4e-174
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 181 LLSNAQRIKKEMEDDFVSVEHLLLAFL-SDDRFG--RLLFNDIRLNEKDLKDAVKAVRGH 237
+++NA + K+ + + H L AF+ SDD G + L ++ + D + V H
Sbjct: 11 IINNATELAKQQANSQLLPLHFLAAFIPSDDTEGSTQYLKTLVKRARYEWGDFERIVNRH 70
Query: 238 Q-RVTDQNP 245
++ QNP
Sbjct: 71 LVKIPSQNP 79
>UNIPROTKB|Q5A376 [details] [associations]
symbol:HSP104 "Putative uncharacterized protein HSP104"
species:237561 "Candida albicans SC5314" [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0009986 "cell surface" evidence=IDA] [GO:0034605
"cellular response to heat" evidence=IMP] [GO:0042623 "ATPase
activity, coupled" evidence=IGI;ISS] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:0051085
"chaperone mediated protein folding requiring cofactor"
evidence=IGI] [GO:0070370 "cellular heat acclimation" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0009986 GO:GO:0009405 EMBL:AACQ01000073 GO:GO:0044011
GO:GO:0042623 GO:GO:0051085 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HOGENOM:HOG000218211 GO:GO:0070370 RefSeq:XP_716146.1
ProteinModelPortal:Q5A376 SMR:Q5A376 STRING:Q5A376 GeneID:3642228
KEGG:cal:CaO19.13747 CGD:CAL0061863 Uniprot:Q5A376
Length = 899
Score = 1666 (591.5 bits), Expect = 1.4e-174, Sum P(2) = 1.4e-174
Identities = 348/769 (45%), Positives = 506/769 (65%)
Query: 179 GLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQ 238
G +L+ A +IK++ +D +V+ +H+LLA L D + +F + ++ +K +RG Q
Sbjct: 91 GQVLTKANKIKQQQKDSYVAQDHILLALLEDQSI-KDIFKEAGMSVDTIKTQAIELRGSQ 149
Query: 239 RVTDQNPEGK--YQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVII 296
R+ + + Y+ L KY D TE AR GK+DPVIGR++EIRR I++L+RR+K+N V+I
Sbjct: 150 RIDSRQADSSSSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLI 209
Query: 297 GEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKE 356
G+ GVGKT+I EG+AQRIV GDVP L +L +LD+ +L AG Y+G+FE+RLK VL E
Sbjct: 210 GDAGVGKTSIVEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNE 269
Query: 357 VTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEK 416
+ KS IILFIDE+H ++G G DA+N+LKPML RG L CIGATT EYR +I K
Sbjct: 270 IEKSKEFIILFIDEIHMLMGDGKS----DAANLLKPMLARGALHCIGATTFAEYRKFISK 325
Query: 417 DPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERF 476
D A ERRFQ++ +V+ T++ILRG++ +YE+HHGV+I RY+T R
Sbjct: 326 DGAFERRFQKIDVPAATVQETVAILRGIQPKYEIHHGVRILDSALVTAAQLASRYLTYRA 385
Query: 477 LPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAV--LKLEMEKLSLKNDTDKASKERLSK 534
LPD A+DLVDE+AA + + SKP ELD ++R + + +E+ L D D ASKERL+
Sbjct: 386 LPDSAVDLVDESAAAVAVARDSKPEELDTLERQLHLVDVEINALERDKDADSASKERLNL 445
Query: 535 LEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKY 594
+ L++K LN+++ +E+ ++ + K ++D + ++ + AER YD AA+L+Y
Sbjct: 446 AKKKKAELEEKIGPLNERYRQERASHEQLTAAKRKLDELEIKAQDAERRYDTATAADLRY 505
Query: 595 GTMISLQRQLEEAEKNLSEFQKSG-HSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREK 653
+ +Q+Q+EE E ++E + S SLL+ V I E ++ TGIP++ L Q+E K
Sbjct: 506 FAIPDIQKQIEELEVKVAEEEASNLDSLLKNAVGPEQICETAARLTGIPVTKLSQAENNK 565
Query: 654 LVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKAL 713
L+ +E L K V+GQ AVK+V++AIR R+GL++P +P SF+F+G +G GKTEL K L
Sbjct: 566 LINMEAELSKEVVGQSEAVKAVSNAIRLRRSGLANPNQP-PSFLFLGLSGSGKTELAKKL 624
Query: 714 ADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDE 773
A FLF E A++RID SE +K S S+L+GA PGYVGYEEGG LTE + RRPYSVVL DE
Sbjct: 625 AGFLFADEKAIIRIDCSELGDKWSASKLLGAAPGYVGYEEGGILTEPLIRRPYSVVLLDE 684
Query: 774 IEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEA 833
+EKA +V +LLQ+LDDGR+T SQG+ V+ +N + IMTSN+G++YI + + SK
Sbjct: 685 VEKAAPEVLTVLLQILDDGRVTSSQGKLVNCSNAIFIMTSNLGANYI----NAAKGSK-- 738
Query: 834 VYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQ--KK 891
+ K+ V++ R FRPEF+NRI +VF L K ISKIV+I+++ +++R K
Sbjct: 739 IDANTKEHVMDAVRAHFRPEFINRISSIVVFNRLSRKAISKIVKIRLSEIENRFTANGKA 798
Query: 892 IDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
I L +A+ L G+ P+ GARP+ R+IQ + N +AV +LKG I+
Sbjct: 799 IQLKLDDDAMEYLCKNGWSPDLGARPLNRLIQNEILNRLAVMLLKGQIQ 847
Score = 52 (23.4 bits), Expect = 1.4e-174, Sum P(2) = 1.4e-174
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 181 LLSNAQRIKKEMEDDFVSVEHLLLAFL-SDDRFG--RLLFNDIRLNEKDLKDAVKAVRGH 237
+++NA + K+ + + H L AF+ SDD G + L ++ + D + V H
Sbjct: 11 IINNATELAKQQANSQLLPLHFLAAFIPSDDTEGSTQYLKTLVKRARYEWGDFERIVNRH 70
Query: 238 Q-RVTDQNP 245
++ QNP
Sbjct: 71 LVKIPSQNP 79
>SGD|S000003949 [details] [associations]
symbol:HSP104 "Disaggregase" species:4932 "Saccharomyces
cerevisiae" [GO:0006950 "response to stress" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0070389 "chaperone
cofactor-dependent protein refolding" evidence=IDA] [GO:0070370
"cellular heat acclimation" evidence=IMP] [GO:0070414 "trehalose
metabolism in response to heat stress" evidence=IMP] [GO:0051082
"unfolded protein binding" evidence=IDA] [GO:0042623 "ATPase
activity, coupled" evidence=IDA;IMP] [GO:0043531 "ADP binding"
evidence=IMP] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051087 "chaperone binding" evidence=IDA] [GO:0034975 "protein
folding in endoplasmic reticulum" evidence=IMP] [GO:0001319
"inheritance of oxidatively modified proteins involved in
replicative cell aging" evidence=IGI;IMP] [GO:0072380 "TRC complex"
evidence=IDA] [GO:0043335 "protein unfolding" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 SGD:S000003949
GO:GO:0005524 GO:GO:0005634 GO:GO:0051082 GO:GO:0043531
EMBL:BK006945 GO:GO:0051087 GO:GO:0043335 GO:GO:0070389
GO:GO:0042623 EMBL:X97560 GO:GO:0034975 eggNOG:COG0542
Gene3D:1.10.1780.10 InterPro:IPR023150 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
GeneTree:ENSGT00390000012961 GO:GO:0070370 GO:GO:0072380
OrthoDB:EOG4T4H3H EMBL:M67479 EMBL:Z73131 EMBL:Z73130 EMBL:AY693002
PIR:S61476 RefSeq:NP_013074.1 ProteinModelPortal:P31539 SMR:P31539
DIP:DIP-2252N IntAct:P31539 MINT:MINT-530773 STRING:P31539
SWISS-2DPAGE:P31539 PaxDb:P31539 PeptideAtlas:P31539
EnsemblFungi:YLL026W GeneID:850633 KEGG:sce:YLL026W CYGD:YLL026w
OMA:DISCAGV SABIO-RK:P31539 NextBio:966553 ArrayExpress:P31539
Genevestigator:P31539 GermOnline:YLL026W GO:GO:0001319
GO:GO:0070414 Uniprot:P31539
Length = 908
Score = 1684 (597.9 bits), Expect = 2.6e-173, P = 2.6e-173
Identities = 362/902 (40%), Positives = 560/902 (62%)
Query: 95 TEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQ-KDGLA---RRILTKAGQDNTK 150
T+FTE+A + A A + ++ H++ A +E +DG + ++ K D
Sbjct: 5 TQFTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDL 64
Query: 151 VLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD 210
+ + + P+ A + G +L +A +I+K+ +D F++ +H+L A +D
Sbjct: 65 FKKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDS 124
Query: 211 RFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGK--YQALEKYGNDLTELARSGKL 268
++ F + +++ + +K +RG+ R+ + + + L KY D+TE AR GKL
Sbjct: 125 SIQQI-FKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQGKL 183
Query: 269 DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKL 328
DPVIGR++EIR I++L+RR K+NP +IGEPG+GKTAI EG+AQRI+ DVP LQ KL
Sbjct: 184 DPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKL 243
Query: 329 ISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASN 388
SLD+A+L AG Y+GDFE+R K VLKE+ +S I+LFIDE+H ++G G DA+N
Sbjct: 244 FSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKD----DAAN 299
Query: 389 MLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERY 448
+LKP L RG+L+ IGATT NEYR+ +EKD A ERRFQ++ +PSV T++ILRGL+ +Y
Sbjct: 300 ILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKY 359
Query: 449 ELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDR 508
E+HHGV+I RY+ R LPD A+DLVD + A + + SKP ELD +R
Sbjct: 360 EIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSKER 419
Query: 509 AV--LKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSI 566
+ +++E++ L D D +K+RL SL+++ + L +++ EK +
Sbjct: 420 QLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQA 479
Query: 567 KEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQK-SGHSLLREE 625
K+++D + + AER YD AA+L+Y + +++Q+E+ E ++E ++ +G + + +
Sbjct: 480 KKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQN 539
Query: 626 VTDLD-IAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRA 684
V D D I+E ++ TGIP+ L +SE EKL+ +E L V+GQ A+K+V++A+R SR+
Sbjct: 540 VVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRS 599
Query: 685 GLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGA 744
GL++P +P ASF+F+G +G GKTEL K +A FLFN E+ ++R+D SE EK++VS+L+G
Sbjct: 600 GLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGT 658
Query: 745 PPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSF 804
GYVGY+EGG LT ++ +PYSV+LFDE+EKAH DV ++LQ+LDDGRIT QG+T+
Sbjct: 659 TAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDC 718
Query: 805 TNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVF 864
+NC+VIMTSN+G+ +I S Q SK + E K V+ RQ FRPEFLNRI ++F
Sbjct: 719 SNCIVIMTSNLGAEFI----NSQQGSK--IQESTKNLVMGAVRQHFRPEFLNRISSIVIF 772
Query: 865 QPLDSKEISKIVEIQMNRVKDRLKQ--KKIDLHYTKEAVTLLGILGFDPNFGARPVKRVI 922
L K I KIV+I++ +++R +Q K L+ T+EA L G+ + GARP+ R+I
Sbjct: 773 NKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLI 832
Query: 923 QQLVENEIAVAILKGDIKXXXXXXXXXXXXPSA-KDLPPRNKLCIKKLES-SSSIDAMVA 980
Q + N++A+ ILK +IK S +++P + C++ L + ++I A
Sbjct: 833 QNEILNKLALRILKNEIKDKETVNVVLKKGKSRDENVPEEAEECLEVLPNHEATIGADTL 892
Query: 981 ND 982
D
Sbjct: 893 GD 894
>TAIR|locus:2157363 [details] [associations]
symbol:ERD1 "EARLY RESPONSIVE TO DEHYDRATION 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase
activity" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0009570 "chloroplast stroma" evidence=IDA;TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0034214
"protein hexamerization" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0009646 "response to
absence of light" evidence=RCA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0042803 GO:GO:0006950 GO:GO:0009941
GO:GO:0016887 GO:GO:0019538 EMBL:AB017063 EMBL:AB023044
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
GO:GO:0034214 ProtClustDB:CLSN2689983 EMBL:D17582 EMBL:AY035112
EMBL:AY133868 IPI:IPI00535711 PIR:JN0901 RefSeq:NP_568750.1
UniGene:At.25346 UniGene:At.69453 ProteinModelPortal:P42762
SMR:P42762 IntAct:P42762 STRING:P42762 PaxDb:P42762 PRIDE:P42762
EnsemblPlants:AT5G51070.1 GeneID:835180 KEGG:ath:AT5G51070
GeneFarm:2731 TAIR:At5g51070 InParanoid:P42762 OMA:MMQDMQN
PhylomeDB:P42762 Genevestigator:P42762 GermOnline:AT5G51070
Uniprot:P42762
Length = 945
Score = 821 (294.1 bits), Expect = 1.3e-157, Sum P(3) = 1.3e-157
Identities = 160/317 (50%), Positives = 223/317 (70%)
Query: 630 DIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDP 689
DIA + S W+GIP+ + ER L+ LE+ L RV+GQD AV +++ A++RSR GL DP
Sbjct: 594 DIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDP 653
Query: 690 ARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYV 749
RPIA+ +F GPTGVGKTEL KALA F +E +++R+DMSEYME+H+VS+L+G+PPGYV
Sbjct: 654 DRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYV 713
Query: 750 GYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVV 809
G+EEGG LTE +RRRP++VVLFDEIEKAH D+FNILLQL +DG +TDSQGR VSF N ++
Sbjct: 714 GFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALI 773
Query: 810 IMTSNIGSHYILETLQS-----VQDSKEAV-YEVMKKQVVELARQTFRPEFLNRIDEYIV 863
IMTSN+GS I + + D +EA Y MK VVE + FRPE LNRIDE ++
Sbjct: 774 IMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVI 833
Query: 864 FQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQ 923
F+ L+ ++ +I+ + + +K RL + L ++ L+ G+DP +GARP++R +
Sbjct: 834 FRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVT 893
Query: 924 QLVENEIAVAILKGDIK 940
++VE+ ++ A L G K
Sbjct: 894 EIVEDPLSEAFLAGSFK 910
Score = 667 (239.9 bits), Expect = 1.3e-157, Sum P(3) = 1.3e-157
Identities = 136/271 (50%), Positives = 181/271 (66%)
Query: 239 RVTDQNPEGKY--QALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVII 296
R+ P GK LE++ DLT A G +DPVIGR+ E++R IQIL RRTKNNP+++
Sbjct: 256 RIAGSGPGGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILL 315
Query: 297 GEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKE 356
GE GVGKTAIAEGLA I P L ++++SLD+ L+AG RG+ E R+ A++ E
Sbjct: 316 GEAGVGKTAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISE 375
Query: 357 VTKSNGQIILFIDELHTIIGAG-----NQSGAMDASNMLKPMLGRGELRCIGATTLNEYR 411
V KS G++ILFIDE+HT+IG+G N+ +D +N+LKP LGRGEL+CI +TTL+E+R
Sbjct: 376 VKKS-GKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFR 434
Query: 412 NYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRY 471
+ EKD AL RRFQ V ++PS E+ + IL GLRE+YE HH K RY
Sbjct: 435 SQFEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRY 494
Query: 472 ITERFLPDKAIDLVDEAAAKLKMEITSKPIE 502
I +RFLPDKAIDL+DEA ++ ++E K E
Sbjct: 495 IADRFLPDKAIDLIDEAGSRARIEAFRKKKE 525
Score = 85 (35.0 bits), Expect = 1.3e-157, Sum P(3) = 1.3e-157
Identities = 54/222 (24%), Positives = 95/222 (42%)
Query: 9 TTFAALKSARHNKLSLAQSGSRAKSI--STFTNFSNSLSRPPIENKLILPPNDVVSAKLS 66
+T + L H LS + S S SI S+ ++F++S + N+ I + S
Sbjct: 5 STSSPLTLHSHRLLSASSSSSHVTSIAASSLSSFASSYLGISLSNRTI--------HRFS 56
Query: 67 FTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLM 126
T R+F R T +S + FTE+A I+ + A+ + +V T+HL+
Sbjct: 57 TTPTNL-RRFPQRK--RKKFTPISAVFE-RFTERAIRAIIFSQKEAKSLGKDMVYTQHLL 112
Query: 127 KALL-EQKD--GLARRILT--KAGQDNTKVL-QATEDFISKQPKVTGATSGPIVGSNFGL 180
L+ E +D G +T KA + + +A D SKQ + + + F +
Sbjct: 113 LGLIAEDRDPQGFLGSGITIDKAREAVWSIWDEANSD--SKQEEASSTSYSKSTDMPFSI 170
Query: 181 ----LLSNAQRIKKEMEDDFVSVEHLLLA-FLSDD-RFGRLL 216
+ A + M+ +++ EH+ + F DD GR+L
Sbjct: 171 STKRVFEAAVEYSRTMDCQYIAPEHIAVGLFTVDDGSAGRVL 212
Score = 71 (30.1 bits), Expect = 3.7e-156, Sum P(3) = 3.7e-156
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 84 SSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTK 143
+S+T S+ T F+ AV+ +R + Q + EH+ L DG A R+L +
Sbjct: 155 ASSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIAVGLFTVDDGSAGRVLKR 214
Query: 144 AGQDNTKVLQA 154
G N +L A
Sbjct: 215 LGA-NMNLLTA 224
Score = 43 (20.2 bits), Expect = 6.1e-92, Sum P(3) = 6.1e-92
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 206 FLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKY 249
F D R F + +NE +DAVK + G + + + KY
Sbjct: 437 FEKDKALARR-FQPVLINEPSEEDAVKILLGLREKYEAHHNCKY 479
>UNIPROTKB|Q6H795 [details] [associations]
symbol:CLPD1 "Chaperone protein ClpD1, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0034605 "cellular
response to heat" evidence=IGI] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0034605 GO:GO:0009941
GO:GO:0017111 EMBL:AP008208 GO:GO:0019538 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 GenomeReviews:AP008208_GR KO:K03696
EMBL:AP004777 RefSeq:NP_001046997.1 UniGene:Os.11935
ProteinModelPortal:Q6H795 PRIDE:Q6H795
EnsemblPlants:LOC_Os02g32520.1 GeneID:4329520 KEGG:osa:4329520
Gramene:Q6H795 OMA:DQFCLDL ProtClustDB:CLSN2689983 Uniprot:Q6H795
Length = 938
Score = 827 (296.2 bits), Expect = 8.8e-153, Sum P(3) = 8.8e-153
Identities = 180/398 (45%), Positives = 262/398 (65%)
Query: 551 DQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKN 610
+ ++R+K+ S I + + D E+ AA+ +++ + ++KY Q A K
Sbjct: 512 ESFNRKKEGQSSI--LLKSPDEYWQEIRAAQNMHEVVSSNQMKYSPR---QENGSAAIKA 566
Query: 611 LSEFQKSGHSLLREE----VTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVI 666
SE S L+ E V +IA + S W+GIP+ L +R+ LV L+ L KRVI
Sbjct: 567 PSEDMNELTSELQVEEPIVVGTEEIARVASLWSGIPVQQLTADDRKLLVGLDGELRKRVI 626
Query: 667 GQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVR 726
GQD AV +++ A++RSR GL+DP RPIA+ +F GPTGVGKTEL KALA F +E+A++R
Sbjct: 627 GQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLR 686
Query: 727 IDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILL 786
+DMSEYME+H+VS+L+G+PPGY+GY E G LTE VRR+P++VVL DEIEKAH D+FNILL
Sbjct: 687 LDMSEYMERHTVSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILL 746
Query: 787 QLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSV----QDSKEAVYEVMKKQV 842
Q+ +DG ++DSQGR VSF N +++MTSNIGS I + +S+ +D++ + Y MK V
Sbjct: 747 QIFEDGHLSDSQGRRVSFKNTLIVMTSNIGSTSISKGRRSMGFMTEDTESSSYVAMKSLV 806
Query: 843 VELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVT 902
+E + FRPE LNRIDE +VF+PL+ ++ I++I + VK RL I L +
Sbjct: 807 MEELKAFFRPELLNRIDEMVVFRPLEKTQMLAILDIILQEVKGRLLALGIGLEVSDAMKD 866
Query: 903 LLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
L+ G+D ++GARP++R + L+E+ I+ AIL G+ K
Sbjct: 867 LICEEGYDKSYGARPLRRAVTHLIEDVISEAILFGEYK 904
Score = 639 (230.0 bits), Expect = 8.8e-153, Sum P(3) = 8.8e-153
Identities = 128/256 (50%), Positives = 178/256 (69%)
Query: 244 NPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGK 303
N + + AL+++ DLT A G +DP+IGR++EI R +QI+ RRTKNNP+++GE GVGK
Sbjct: 258 NSKKEKGALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIICRRTKNNPILLGEAGVGK 317
Query: 304 TAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQ 363
TAIAEGLA RI GDVP L ++++SLD+ L+AG RG+ E R+ ++++EV ++ G
Sbjct: 318 TAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAKERGELESRVTSLIREVREA-GD 376
Query: 364 IILFIDELHTIIGAGNQS---GA-MDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPA 419
+ILFIDE+H +IG+G GA +D N+LKP L RGEL+CI ATTL+E+R + EKD A
Sbjct: 377 VILFIDEVHNLIGSGTVGKGKGAGLDIGNLLKPPLARGELQCIAATTLDEHRMHFEKDKA 436
Query: 420 LERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPD 479
L RRFQ V ++PS ++ + IL GLRE+YE +H K RYI +R LPD
Sbjct: 437 LARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAAVYLSARYIPDRQLPD 496
Query: 480 KAIDLVDEAAAKLKME 495
KAIDL+DEA ++ +ME
Sbjct: 497 KAIDLIDEAGSRARME 512
Score = 61 (26.5 bits), Expect = 8.8e-153, Sum P(3) = 8.8e-153
Identities = 32/122 (26%), Positives = 52/122 (42%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALL-EQKDG---LARRILTKAGQDNTKVL 152
FTE+A + +V + A+ + V HL+ L+ E + L+ I + ++ + +
Sbjct: 77 FTERAVKAVVLSQREAKGLGEGAVAPRHLLLGLIAEDRSAGGFLSSGINIERAREECRGI 136
Query: 153 QATEDFISKQPKVTGA---TSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLA-FLS 208
A D P +G+ P GS + A + M F+S EHL LA F
Sbjct: 137 GA-RDLTPGAPSPSGSGLEMDIPFSGS-CKRVFEVAVEFSRNMGCSFISPEHLALALFTL 194
Query: 209 DD 210
DD
Sbjct: 195 DD 196
Score = 50 (22.7 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 185 AQRIKKEMEDDFVSVEHLLLAFLSDDRF-GRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQ 243
+QR K + + V+ HLLL +++DR G L + I + ++ + + G + +T
Sbjct: 88 SQREAKGLGEGAVAPRHLLLGLIAEDRSAGGFLSSGINIERA--REECRGI-GARDLTPG 144
Query: 244 NPEGKYQALE 253
P LE
Sbjct: 145 APSPSGSGLE 154
Score = 43 (20.2 bits), Expect = 7.0e-151, Sum P(3) = 7.0e-151
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 108 AVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKV 151
AV+ +R + EHL AL D +L G D +++
Sbjct: 170 AVEFSRNMGCSFISPEHLALALFTLDDPTTNSLLRSLGADPSQL 213
>GENEDB_PFALCIPARUM|PF11_0175 [details] [associations]
symbol:PF11_0175 "heat shock protein 101,
putative" species:5833 "Plasmodium falciparum" [GO:0006986
"response to unfolded protein" evidence=ISS] [GO:0009408 "response
to heat" evidence=ISS] [GO:0020011 "apicoplast" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0009408 GO:GO:0017111 GO:GO:0006986 GO:GO:0019538
EMBL:AE014186 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
HSSP:P03815 GO:GO:0020011 RefSeq:XP_001347846.1
ProteinModelPortal:Q8IIJ8 IntAct:Q8IIJ8 MINT:MINT-1584293
PRIDE:Q8IIJ8 EnsemblProtists:PF11_0175:mRNA GeneID:810722
KEGG:pfa:PF11_0175 EuPathDB:PlasmoDB:PF3D7_1116800 OMA:DDKHLYL
ProtClustDB:CLSZ2432325 Uniprot:Q8IIJ8
Length = 906
Score = 1436 (510.6 bits), Expect = 5.0e-147, P = 5.0e-147
Identities = 305/831 (36%), Positives = 504/831 (60%)
Query: 124 HLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGA---TSGPIVGS-NFG 179
H++ AL + G L K N L+ D +Q + GA IV S
Sbjct: 64 HILSALAKSDYGST---LFKENNVNAANLKEYIDIALEQTRA-GAPLDNKSKIVNSAEVK 119
Query: 180 LLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQR 239
L+ A+ + + V VEHLL LS+D +FN++ L ++ +K +K R ++
Sbjct: 120 ETLALAEAAANKYKSPKVDVEHLLSG-LSNDELVNEIFNEVYLTDEAIKAILK--RKFEK 176
Query: 240 VTDQNPEGKYQAL--EKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIG 297
T ++ +GK L E++G+++ E R+GKL + GRD+EIR I+ L R KN+PV++G
Sbjct: 177 -TKKDKDGKTGTLYIEQFGSNMNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVG 235
Query: 298 EPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEV 357
PG GKT I EGL RI +GDVP+ LQ +ISL+ +GT YRG+FE R+K ++KE+
Sbjct: 236 NPGTGKTTIVEGLVYRIEKGDVPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKEL 295
Query: 358 TKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKD 417
+IILF+DE+H ++GAG G DA+N+LKP+L +GE++ IGATT+ EYR +IE
Sbjct: 296 KNKKNKIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESC 355
Query: 418 PALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFL 477
A ERRF+++ + PSV+ T+ ILR L+ +YE +G+ I R+I +R+L
Sbjct: 356 SAFERRFEKILVEPPSVDMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYL 415
Query: 478 PDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEH 537
PDKAIDL+++A + L+++++ KP +D +R + +L E +L+ D DK SK++ +KL
Sbjct: 416 PDKAIDLLNKACSFLQVQLSGKPRIIDVTERDIERLSYEISTLEKDVDKVSKKKYNKLIK 475
Query: 538 DLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAA---ELKY 594
+ K++ K+ +++ + + R K+EI++ +++ ++Y + EL+
Sbjct: 476 EFEEKKEQLKKYYEEYVITGERLKR----KKEIEKKLNDLKELTQNYVYSNKEPPIELQN 531
Query: 595 GTMISLQRQLEEAEKNLSEFQKSGHSLLR-EEVTDLDIAEIVSKWTGIPLSSLQQSEREK 653
+ Q+ LE ++ ++ + H+ + + V ++ I + +G+PL SL +
Sbjct: 532 SLKEAQQKYLELYKETVAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESSKG 591
Query: 654 LVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKAL 713
+ L L K +IG + +KS++DA+ ++ G+ DP +PI +F+F+GPTGVGKTEL K L
Sbjct: 592 ALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTL 651
Query: 714 ADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDE 773
A LFN+++ L+R++MSE+ E HSVS++ G+PPGYVG+ + GQLTE VR +P+SVVLFDE
Sbjct: 652 AIELFNSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDE 711
Query: 774 IEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSK-- 831
+EKAH DVF +LLQ+L DG I D+ R + F+N ++IMTSN+G+ + L D+
Sbjct: 712 LEKAHADVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDADNSGT 771
Query: 832 ---EAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLK 888
+ V E ++ +++ ++ F+PEF+NRID+ VF+PL+ K + KIV ++ +++ RL+
Sbjct: 772 PEYKRVMEDVRLSLIKKCKKVFKPEFVNRIDKIGVFEPLNKKNLHKIVALRFKKLEKRLE 831
Query: 889 QKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
+K I + +++A+ + +DP GARP I+ ++ + A+ LK ++
Sbjct: 832 EKNIQVSVSEKAIDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKEL 882
>UNIPROTKB|Q8IIJ8 [details] [associations]
symbol:PF11_0175 "Heat shock protein 101, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006986 "response to
unfolded protein" evidence=ISS] [GO:0009408 "response to heat"
evidence=ISS] [GO:0020011 "apicoplast" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0009408 GO:GO:0017111 GO:GO:0006986 GO:GO:0019538
EMBL:AE014186 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218211
HSSP:P03815 GO:GO:0020011 RefSeq:XP_001347846.1
ProteinModelPortal:Q8IIJ8 IntAct:Q8IIJ8 MINT:MINT-1584293
PRIDE:Q8IIJ8 EnsemblProtists:PF11_0175:mRNA GeneID:810722
KEGG:pfa:PF11_0175 EuPathDB:PlasmoDB:PF3D7_1116800 OMA:DDKHLYL
ProtClustDB:CLSZ2432325 Uniprot:Q8IIJ8
Length = 906
Score = 1436 (510.6 bits), Expect = 5.0e-147, P = 5.0e-147
Identities = 305/831 (36%), Positives = 504/831 (60%)
Query: 124 HLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGA---TSGPIVGS-NFG 179
H++ AL + G L K N L+ D +Q + GA IV S
Sbjct: 64 HILSALAKSDYGST---LFKENNVNAANLKEYIDIALEQTRA-GAPLDNKSKIVNSAEVK 119
Query: 180 LLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQR 239
L+ A+ + + V VEHLL LS+D +FN++ L ++ +K +K R ++
Sbjct: 120 ETLALAEAAANKYKSPKVDVEHLLSG-LSNDELVNEIFNEVYLTDEAIKAILK--RKFEK 176
Query: 240 VTDQNPEGKYQAL--EKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIG 297
T ++ +GK L E++G+++ E R+GKL + GRD+EIR I+ L R KN+PV++G
Sbjct: 177 -TKKDKDGKTGTLYIEQFGSNMNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVG 235
Query: 298 EPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEV 357
PG GKT I EGL RI +GDVP+ LQ +ISL+ +GT YRG+FE R+K ++KE+
Sbjct: 236 NPGTGKTTIVEGLVYRIEKGDVPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKEL 295
Query: 358 TKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKD 417
+IILF+DE+H ++GAG G DA+N+LKP+L +GE++ IGATT+ EYR +IE
Sbjct: 296 KNKKNKIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESC 355
Query: 418 PALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFL 477
A ERRF+++ + PSV+ T+ ILR L+ +YE +G+ I R+I +R+L
Sbjct: 356 SAFERRFEKILVEPPSVDMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYL 415
Query: 478 PDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEH 537
PDKAIDL+++A + L+++++ KP +D +R + +L E +L+ D DK SK++ +KL
Sbjct: 416 PDKAIDLLNKACSFLQVQLSGKPRIIDVTERDIERLSYEISTLEKDVDKVSKKKYNKLIK 475
Query: 538 DLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAA---ELKY 594
+ K++ K+ +++ + + R K+EI++ +++ ++Y + EL+
Sbjct: 476 EFEEKKEQLKKYYEEYVITGERLKR----KKEIEKKLNDLKELTQNYVYSNKEPPIELQN 531
Query: 595 GTMISLQRQLEEAEKNLSEFQKSGHSLLR-EEVTDLDIAEIVSKWTGIPLSSLQQSEREK 653
+ Q+ LE ++ ++ + H+ + + V ++ I + +G+PL SL +
Sbjct: 532 SLKEAQQKYLELYKETVAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESSKG 591
Query: 654 LVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKAL 713
+ L L K +IG + +KS++DA+ ++ G+ DP +PI +F+F+GPTGVGKTEL K L
Sbjct: 592 ALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTL 651
Query: 714 ADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDE 773
A LFN+++ L+R++MSE+ E HSVS++ G+PPGYVG+ + GQLTE VR +P+SVVLFDE
Sbjct: 652 AIELFNSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDE 711
Query: 774 IEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSK-- 831
+EKAH DVF +LLQ+L DG I D+ R + F+N ++IMTSN+G+ + L D+
Sbjct: 712 LEKAHADVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDADNSGT 771
Query: 832 ---EAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLK 888
+ V E ++ +++ ++ F+PEF+NRID+ VF+PL+ K + KIV ++ +++ RL+
Sbjct: 772 PEYKRVMEDVRLSLIKKCKKVFKPEFVNRIDKIGVFEPLNKKNLHKIVALRFKKLEKRLE 831
Query: 889 QKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
+K I + +++A+ + +DP GARP I+ ++ + A+ LK ++
Sbjct: 832 EKNIQVSVSEKAIDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKEL 882
>TAIR|locus:2130070 [details] [associations]
symbol:CLPB2 "casein lytic proteinase B2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0017111 EMBL:Z97336
EMBL:AL161539 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218211 IPI:IPI00516634 PIR:G85160
RefSeq:NP_567437.1 UniGene:At.54318 ProteinModelPortal:F4JVJ1
SMR:F4JVJ1 EnsemblPlants:AT4G14670.1 GeneID:827117
KEGG:ath:AT4G14670 GeneFarm:1890 TAIR:At4g14670 InParanoid:O23323
OMA:NNSAHAS ArrayExpress:F4JVJ1 Uniprot:F4JVJ1
Length = 623
Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
Identities = 290/588 (49%), Positives = 407/588 (69%)
Query: 165 VTGATSGPIVGSNFGLLLSNA--QRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRL 222
+T A G I + +++ + + K+ + D V V L+++ L D + +L +
Sbjct: 50 ITSAGDGDISAQSVVNVINQSLYKLTKRNLGDTKVGVAVLVISLLEDSQISDVLKEAGVV 109
Query: 223 NEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCI 282
EK +K V+ +RG E +AL+ YG DL E A GKLDPVIGR EIRR I
Sbjct: 110 PEK-VKSEVEKLRG---------EVILRALKTYGTDLVEQA--GKLDPVIGRHREIRRVI 157
Query: 283 QILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCY 342
++LSRRTKNNPV+IGEPGVGKTA+ EGLAQRI++GDVP L KLISL+ ++VAGT
Sbjct: 158 EVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPINLTGVKLISLEFGAMVAGTTL 217
Query: 343 RGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCI 402
RG FE+RLK+VLK V ++ G+++LFIDE+H +GA SG+ DA+ +LKPML RG+LR I
Sbjct: 218 RGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKASGSTDAAKLLKPMLARGQLRFI 277
Query: 403 GATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXX 462
GATTL EYR ++EKD A ERRFQQVF +PSV +TISILRGL+E+YE HHGV+I
Sbjct: 278 GATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALV 337
Query: 463 XXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSL-K 521
RYIT R LPDKAIDLVDE+ A +K ++ +P E+D ++R V++LE+E +L K
Sbjct: 338 LSAQLSERYITGRRLPDKAIDLVDESCAHVKAQLDIQPEEIDSLERKVMQLEIEIHALEK 397
Query: 522 NDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAE 581
DKAS+ RLS++ +L+ L+ K + L ++ +EK +++ R +K+ D + + ++ AE
Sbjct: 398 EKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQNRDDLMIALQEAE 457
Query: 582 RDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGI 641
R +D+ +AA LKYG + ++ + + EK+ + + +L E V +IAE+VS+WTGI
Sbjct: 458 RQHDVPKAAVLKYGAIQEVESAIAKLEKSAKD-----NVMLTETVGPENIAEVVSRWTGI 512
Query: 642 PLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGP 701
P++ L Q+E+++L+ L + LH+RV+GQD AVK+VA AI RSR GL P +P SF+F+GP
Sbjct: 513 PVTRLDQNEKKRLISLADKLHERVVGQDEAVKAVAAAILRSRVGLGRPQQPSGSFLFLGP 572
Query: 702 TGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYV 749
TGVGKTEL KALA+ LF++EN LVR+DMSEY +K SV++L+GAPPGYV
Sbjct: 573 TGVGKTELAKALAEQLFDSENLLVRLDMSEYNDKFSVNKLIGAPPGYV 620
>UNIPROTKB|Q74G19 [details] [associations]
symbol:tssH "Type VI secretion system ATPase TssH, putative
chaperone" species:243231 "Geobacter sulfurreducens PCA"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 SMART:SM00382 GO:GO:0005524
GO:GO:0006508 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111
GO:GO:0008233 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218209
RefSeq:NP_951492.1 ProteinModelPortal:Q74G19 SMR:Q74G19
GeneID:2686345 KEGG:gsu:GSU0433 PATRIC:22023612 KO:K11907
OMA:TACARVK ProtClustDB:CLSK743091
BioCyc:GSUL243231:GH27-402-MONOMER InterPro:IPR017729
TIGRFAMs:TIGR03345 Uniprot:Q74G19
Length = 875
Score = 1340 (476.8 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 299/698 (42%), Positives = 425/698 (60%)
Query: 251 ALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGL 310
AL ++ D T A G +DPV GRD EI R I IL+RR KNNP+++GE GVGKTA+ EGL
Sbjct: 178 ALSRFCTDFTARAAEGGMDPVFGRDREIGRMIDILARRRKNNPIVVGEAGVGKTAVVEGL 237
Query: 311 AQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDE 370
A RIV G+VPE L+ +L+ LD+ L AG +G+FE RLK+V++EV ++ +ILFIDE
Sbjct: 238 ALRIVEGEVPEALREVRLLGLDLGLLQAGAGVKGEFESRLKSVIEEVKGASRPVILFIDE 297
Query: 371 LHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCD 430
HT+IGAGNQ+G DA+N+LKP L RGELR I ATT +EY+ Y EKD AL RRFQ V D
Sbjct: 298 AHTLIGAGNQAGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLD 357
Query: 431 QPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA 490
+PSVE + ILRGL++ YE HGV I RY++ R LPDKA+DL+D AAA
Sbjct: 358 EPSVETAVLILRGLKDTYEAAHGVTIRDDAVRAAAELSSRYLSGRQLPDKAVDLLDTAAA 417
Query: 491 KLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKE---RLSKLEHDLNSLKQKQK 547
++K+ +T KP ++E +R + LE E+ +L+ D + E RL+ L+ +L L+++
Sbjct: 418 RVKLLLTGKPGRVEEAERRIQALEREEAALRRDRLQGRPEDEGRLAVLKEELALLREELA 477
Query: 548 ELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEA 607
+ +W RE++L + V L EAAE R A G + L + E A
Sbjct: 478 AVTARWHRERELAGAV---------VALRNEAAE-----GRDAG---GDAVGL-KMAEPA 519
Query: 608 EKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIG 667
K L+E Q L+R EV +A++V+ WTGIPL L++ ++ LEE L +R+ G
Sbjct: 520 AK-LAEVQ-GDEPLVRIEVDPEVVAQVVADWTGIPLGRLRKDRTAGVLALEEGLRRRIRG 577
Query: 668 QDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRI 727
Q+ A+ +VA+ +R S AGL DP +P+ F+ +GP+GVGKTE A+AD LF E L I
Sbjct: 578 QEPALAAVAEVLRSSAAGLKDPRQPLGVFLLVGPSGVGKTETAVAVADLLFGGERFLTVI 637
Query: 728 DMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQ 787
+MSE+ E+H+ SRL+G+PPGYVGY EGG LTE VRR PYS VL DE+EKAH DV N+ Q
Sbjct: 638 NMSEFQERHTTSRLIGSPPGYVGYGEGGVLTEAVRRSPYSAVLLDEVEKAHPDVLNLFYQ 697
Query: 788 LLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELAR 847
+ D G + D +GR + F N V+ +TSN+ + ++ + ++ + E+ LAR
Sbjct: 698 VFDKGMLADGEGRVIDFANTVIFLTSNLAADVVVS--RCAEEPQPTTEELAAAIRPHLAR 755
Query: 848 QTFRPEFLNRID--EYIVFQPLDSKEISKIVEIQMNRVKDRLKQK-KIDLHYTKEAVTLL 904
F+P L R+ Y+ P DS E +IV +++ RV +RL++ + +L +T L
Sbjct: 756 H-FKPALLARMTVVPYLTLAP-DSLE--EIVGLKLGRVAERLRENSRTELAWTPAVAARL 811
Query: 905 GILGFDPNFGARPVKRVIQ----QLVENEIAVAILKGD 938
+ GAR + +++ L+ EI I G+
Sbjct: 812 AARCSEVESGARAIDHILRGTLLPLLSREILARIGGGE 849
Score = 44 (20.5 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 235 RGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLD 269
RGH VT ++ + L++ G DL + R+ +D
Sbjct: 31 RGHYEVTVEHFLARL--LDEAGGDLVAVLRNSNID 63
>TIGR_CMR|GSU_0433 [details] [associations]
symbol:GSU_0433 "clpB protein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0008233
Gene3D:1.10.1780.10 InterPro:IPR023150 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 HOGENOM:HOG000218209 RefSeq:NP_951492.1
ProteinModelPortal:Q74G19 SMR:Q74G19 GeneID:2686345
KEGG:gsu:GSU0433 PATRIC:22023612 KO:K11907 OMA:TACARVK
ProtClustDB:CLSK743091 BioCyc:GSUL243231:GH27-402-MONOMER
InterPro:IPR017729 TIGRFAMs:TIGR03345 Uniprot:Q74G19
Length = 875
Score = 1340 (476.8 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 299/698 (42%), Positives = 425/698 (60%)
Query: 251 ALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGL 310
AL ++ D T A G +DPV GRD EI R I IL+RR KNNP+++GE GVGKTA+ EGL
Sbjct: 178 ALSRFCTDFTARAAEGGMDPVFGRDREIGRMIDILARRRKNNPIVVGEAGVGKTAVVEGL 237
Query: 311 AQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDE 370
A RIV G+VPE L+ +L+ LD+ L AG +G+FE RLK+V++EV ++ +ILFIDE
Sbjct: 238 ALRIVEGEVPEALREVRLLGLDLGLLQAGAGVKGEFESRLKSVIEEVKGASRPVILFIDE 297
Query: 371 LHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCD 430
HT+IGAGNQ+G DA+N+LKP L RGELR I ATT +EY+ Y EKD AL RRFQ V D
Sbjct: 298 AHTLIGAGNQAGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLD 357
Query: 431 QPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA 490
+PSVE + ILRGL++ YE HGV I RY++ R LPDKA+DL+D AAA
Sbjct: 358 EPSVETAVLILRGLKDTYEAAHGVTIRDDAVRAAAELSSRYLSGRQLPDKAVDLLDTAAA 417
Query: 491 KLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKE---RLSKLEHDLNSLKQKQK 547
++K+ +T KP ++E +R + LE E+ +L+ D + E RL+ L+ +L L+++
Sbjct: 418 RVKLLLTGKPGRVEEAERRIQALEREEAALRRDRLQGRPEDEGRLAVLKEELALLREELA 477
Query: 548 ELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEA 607
+ +W RE++L + V L EAAE R A G + L + E A
Sbjct: 478 AVTARWHRERELAGAV---------VALRNEAAE-----GRDAG---GDAVGL-KMAEPA 519
Query: 608 EKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIG 667
K L+E Q L+R EV +A++V+ WTGIPL L++ ++ LEE L +R+ G
Sbjct: 520 AK-LAEVQ-GDEPLVRIEVDPEVVAQVVADWTGIPLGRLRKDRTAGVLALEEGLRRRIRG 577
Query: 668 QDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRI 727
Q+ A+ +VA+ +R S AGL DP +P+ F+ +GP+GVGKTE A+AD LF E L I
Sbjct: 578 QEPALAAVAEVLRSSAAGLKDPRQPLGVFLLVGPSGVGKTETAVAVADLLFGGERFLTVI 637
Query: 728 DMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQ 787
+MSE+ E+H+ SRL+G+PPGYVGY EGG LTE VRR PYS VL DE+EKAH DV N+ Q
Sbjct: 638 NMSEFQERHTTSRLIGSPPGYVGYGEGGVLTEAVRRSPYSAVLLDEVEKAHPDVLNLFYQ 697
Query: 788 LLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELAR 847
+ D G + D +GR + F N V+ +TSN+ + ++ + ++ + E+ LAR
Sbjct: 698 VFDKGMLADGEGRVIDFANTVIFLTSNLAADVVVS--RCAEEPQPTTEELAAAIRPHLAR 755
Query: 848 QTFRPEFLNRID--EYIVFQPLDSKEISKIVEIQMNRVKDRLKQK-KIDLHYTKEAVTLL 904
F+P L R+ Y+ P DS E +IV +++ RV +RL++ + +L +T L
Sbjct: 756 H-FKPALLARMTVVPYLTLAP-DSLE--EIVGLKLGRVAERLRENSRTELAWTPAVAARL 811
Query: 905 GILGFDPNFGARPVKRVIQ----QLVENEIAVAILKGD 938
+ GAR + +++ L+ EI I G+
Sbjct: 812 AARCSEVESGARAIDHILRGTLLPLLSREILARIGGGE 849
Score = 44 (20.5 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 235 RGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLD 269
RGH VT ++ + L++ G DL + R+ +D
Sbjct: 31 RGHYEVTVEHFLARL--LDEAGGDLVAVLRNSNID 63
>TIGR_CMR|SPO_3169 [details] [associations]
symbol:SPO_3169 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR013461
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
KO:K03694 GO:GO:0004176 InterPro:IPR019489 PANTHER:PTHR11638:SF14
Pfam:PF10431 SMART:SM01086 TIGRFAMs:TIGR02639 RefSeq:YP_168372.1
ProteinModelPortal:Q5LNN4 SMR:Q5LNN4 GeneID:3195159
KEGG:sil:SPO3169 PATRIC:23379785 OMA:YMEKHAL ProtClustDB:CLSK934078
Uniprot:Q5LNN4
Length = 775
Score = 708 (254.3 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 149/298 (50%), Positives = 202/298 (67%)
Query: 246 EGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTA 305
E K AL KY +L +R+G +DP+IGRD E+ RCIQ+L RR KNNP+++G+PGVGKTA
Sbjct: 175 EQKESALSKYCVNLNAKSRAGDIDPLIGRDHEVERCIQVLCRRRKNNPLLVGDPGVGKTA 234
Query: 306 IAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQII 365
IAEGLA++IV G++PE L + SLDM +L+AGT YRGDFE+RLKAV+ E+ + + +
Sbjct: 235 IAEGLARKIVAGEIPEVLSKTTIYSLDMGALLAGTRYRGDFEERLKAVVNEL-EDHPDAV 293
Query: 366 LFIDELHTIIGAGNQSG-AMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRF 424
LFIDE+HT+IGAG SG AMDASN+LKP L G+LR +G+TT E+R + EKD AL RRF
Sbjct: 294 LFIDEIHTVIGAGATSGGAMDASNLLKPALQGGKLRTMGSTTYKEFRQHFEKDRALSRRF 353
Query: 425 QQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDL 484
Q++ ++P+VE+++ IL+GL+ +E HH V+ RYI +R LPDKAID+
Sbjct: 354 QKIDVNEPTVEDSVKILKGLKPYFEEHHEVRYTADAIKSAVELSARYINDRKLPDKAIDV 413
Query: 485 VDEAAAKLKMEITSK---PIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDL 539
+DEA A + SK I + EI+ V K+ ++ KN T K E L LE L
Sbjct: 414 IDEAGAAQHLVAESKRRKTIGVKEIEAVVAKIA--RIPPKNVT-KDDAEVLKDLEASL 468
Score = 630 (226.8 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 136/318 (42%), Positives = 205/318 (64%)
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
R+ + +I +V+K IP ++ + + E L LE L + V GQD A+++++ AI+ +
Sbjct: 430 RKTIGVKEIEAVVAKIARIPPKNVTKDDAEVLKDLEASLKRVVFGQDKAIEALSSAIKLA 489
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL +P +PI +++F GPTGVGKTE+ K LA+ L E L+R DMSEYMEKH+VSRL+
Sbjct: 490 RAGLREPEKPIGNYLFAGPTGVGKTEVAKQLAETL-GVE--LLRFDMSEYMEKHAVSRLI 546
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVG+++GG LT+ V + P+ V+L DE+EKAH DV+NILLQ++D G++TD GRTV
Sbjct: 547 GAPPGYVGFDQGGLLTDGVDQHPHCVLLLDEMEKAHPDVYNILLQVMDHGQLTDHNGRTV 606
Query: 803 SFTNCVVIMTSNIGS-HYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEY 861
+F N V+IMTSN G+ + +D +E + + R TF PEF NR+D
Sbjct: 607 NFRNVVLIMTSNAGAAEQAKSAIGFGRDRREG------EDTAAIER-TFTPEFRNRLDAV 659
Query: 862 IVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRV 921
I F PL + I ++VE + +++ +L + + + T +A L G+D GARP+ RV
Sbjct: 660 ISFAPLPKEVILQVVEKFVLQLEAQLMDRHVHIELTPQAAEWLADKGYDDKMGARPLGRV 719
Query: 922 IQQLVENEIAVAILKGDI 939
IQ+ ++ +A +L G +
Sbjct: 720 IQEHIKKPLAEELLFGKL 737
Score = 59 (25.8 bits), Expect = 4.4e-139, Sum P(3) = 4.4e-139
Identities = 40/178 (22%), Positives = 71/178 (39%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQD-----NTKV 151
F+ + I A+ AA + EHL+ ALL++ D + R++ D +T V
Sbjct: 4 FSSTLEQAIHAALAAANERRHEFATLEHLLLALLDEPDAV--RVMQACSVDLKELRDTLV 61
Query: 152 LQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR 211
ED + + G+ + P F ++ A + V+ ++L+A ++
Sbjct: 62 EFVDEDLSNLVTDIDGSEAVPTAA--FQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERE 119
Query: 212 FGRLLFNDIRLNEKDLK--DAVKAVRGHQRVTDQN-PEGKYQALEKYGNDLTELARSG 266
F L E+D+ DAV + H D E + ++G + T A SG
Sbjct: 120 SNAAYF----LQEQDMTRYDAVNFI-AHGVAKDPAFGENRPVTGAEHGEEETSSAPSG 172
Score = 56 (24.8 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 167 GATSGPIV-GSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEK 225
GATSG + SN LL A + K + + F D R F I +NE
Sbjct: 306 GATSGGAMDASN---LLKPALQGGKLRTMGSTTYKEFRQHFEKDRALSRR-FQKIDVNEP 361
Query: 226 DLKDAVKAVRGHQRVTDQNPEGKYQA 251
++D+VK ++G + +++ E +Y A
Sbjct: 362 TVEDSVKILKGLKPYFEEHHEVRYTA 387
Score = 55 (24.4 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 172 PIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAV 231
P S + A E +F ++EHLLLA L + R++ ++ K+L+D +
Sbjct: 2 PSFSSTLEQAIHAALAAANERRHEFATLEHLLLALLDEPDAVRVM-QACSVDLKELRDTL 60
>TIGR_CMR|CPS_2893 [details] [associations]
symbol:CPS_2893 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 KO:K03694 GO:GO:0004176
InterPro:IPR019489 PANTHER:PTHR11638:SF14 Pfam:PF10431
SMART:SM01086 TIGRFAMs:TIGR02639 RefSeq:YP_269594.1
ProteinModelPortal:Q480C5 SMR:Q480C5 STRING:Q480C5 GeneID:3520296
KEGG:cps:CPS_2893 PATRIC:21468811 OMA:DAKHVIL
ProtClustDB:CLSK938188 BioCyc:CPSY167879:GI48-2943-MONOMER
Uniprot:Q480C5
Length = 752
Score = 745 (267.3 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 177/461 (38%), Positives = 273/461 (59%)
Query: 112 ARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQ-PKVTGAT- 169
A+ + + + EHL+ ALL+ + L G D TK+ ++ DFIS+ P + +
Sbjct: 17 AKESRHEFMTVEHLLLALLDNPSAI--EALGACGADLTKLRKSLLDFISETTPTIPVSEH 74
Query: 170 ---SGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRF-GRLLFNDIRLNEK 225
+ P +G F +L A + + VS ++L+A S+ + ++
Sbjct: 75 ERETQPTLG--FQRVLQRAVFHVQSSGKNEVSGSNVLVAIFSEQESQAAYILKKSDISRL 132
Query: 226 DLKDAVKAVRGHQRVTDQN-P---EGKYQA------LEKYGNDLTELARSGKLDPVIGRD 275
D+ + + G ++ D++ P +G+ Q+ ++ + +L E A G +DP+IGRD
Sbjct: 133 DIVNYIS--HGIAKIDDEHSPHTLDGEQQSEEEPRTIDNFSVNLNEEAIKGNIDPLIGRD 190
Query: 276 DEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMAS 335
DE+ R +Q+LSRR KNNP+ +GE GVGKTAIAEGLA IV +VPE L + + SLDM +
Sbjct: 191 DELERTLQVLSRRRKNNPLFVGEAGVGKTAIAEGLANLIVNKEVPEFLADATIYSLDMGA 250
Query: 336 LVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAM-DASNMLKPML 394
L+AGT YRGDFEKR K++LKE+ +++ +LFIDE+HTIIGAG SG M DASN+LKP+L
Sbjct: 251 LLAGTKYRGDFEKRFKSLLKEL-EADKNAVLFIDEIHTIIGAGAASGGMMDASNLLKPLL 309
Query: 395 GRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGV 454
G++RC+G+TT EY++ EKD AL RRFQ++ +PSV +T IL+GL+E+YE HHG+
Sbjct: 310 SAGKIRCLGSTTYQEYQSVFEKDRALARRFQKIDIAEPSVADTTKILQGLKEKYESHHGI 369
Query: 455 KIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIE-LDEIDRAVLKL 513
+ +YI ERFLPDKAID++DEA AK ++ +K + ++ D +
Sbjct: 370 RYTNKALHAAAQLSAKYINERFLPDKAIDVIDEAGAKQQLVAPNKRKKVINNTDIESIVA 429
Query: 514 EMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWS 554
+M ++ K+ K+ L L+ +L + Q + D+ S
Sbjct: 430 KMARIPEKS-VSLTEKDGLKNLDRNLKLVVFGQDQAVDELS 469
Score = 628 (226.1 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 135/317 (42%), Positives = 201/317 (63%)
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
++ + + DI IV+K IP S+ +E++ L L+ L V GQD AV ++ IR S
Sbjct: 416 KKVINNTDIESIVAKMARIPEKSVSLTEKDGLKNLDRNLKLVVFGQDQAVDELSSVIRLS 475
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL +P+ SF+F GPTGVGKTE+ + LA L E L+R DMSEYMEKH+VSRL+
Sbjct: 476 RAGLGSEEKPVGSFLFAGPTGVGKTEITQQLAKIL-GIE--LLRFDMSEYMEKHAVSRLI 532
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVGYE+GG LT+ V + P++VVL DEIEKAH+DV+NILLQ++D G +TD+ GR
Sbjct: 533 GAPPGYVGYEQGGLLTDGVIKHPHAVVLLDEIEKAHEDVYNILLQVMDHGTLTDNNGRKA 592
Query: 803 SFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYI 862
F N ++++T+N G + ET++ K+ + + + + F PEF NR+D +
Sbjct: 593 DFRNIILVLTTNAG---VQETVRQSIGFKQQDHSL---DALSEINKVFSPEFRNRLDNIV 646
Query: 863 VFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVI 922
F LD+ I ++V+ + ++ +L K + L TK+A L G+D GARP+ R+I
Sbjct: 647 WFNHLDNIVIHQVVDKFIVELQAQLDDKGVSLELTKQAKQWLAENGYDKAMGARPMARLI 706
Query: 923 QQLVENEIAVAILKGDI 939
Q+ ++ +A +L G++
Sbjct: 707 QEHLKKTLANELLFGEL 723
Score = 60 (26.2 bits), Expect = 7.6e-65, Sum P(2) = 7.6e-65
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 182 LSNAQRIKKEMEDDFVSVEHLLLAFLSD 209
L+ A R KE +F++VEHLLLA L +
Sbjct: 10 LNLAFRQAKESRHEFMTVEHLLLALLDN 37
>UNIPROTKB|Q9KSW2 [details] [associations]
symbol:VC_1144 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233
"peptidase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR013461 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508 GO:GO:0008233
Gene3D:1.10.1780.10 InterPro:IPR023150 KO:K03694 OMA:DRETQPT
ProtClustDB:PRK11034 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086
TIGRFAMs:TIGR02639 HSSP:P15716 PIR:E82236 RefSeq:NP_230789.1
ProteinModelPortal:Q9KSW2 SMR:Q9KSW2 DNASU:2614577 GeneID:2614577
KEGG:vch:VC1144 PATRIC:20081380 Uniprot:Q9KSW2
Length = 756
Score = 716 (257.1 bits), Expect = 3.7e-133, Sum P(2) = 3.7e-133
Identities = 176/459 (38%), Positives = 254/459 (55%)
Query: 107 GAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTK-----VLQATEDFISK 161
GA AR + + EHL+ ALLE + +A D + + T I K
Sbjct: 12 GAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQTTPLIPK 71
Query: 162 QPKVTGATSGPIVGSNFGLLLSNAQ-RIKKEMEDDFVSVEHLLLAFLSDDRFGRLLF--N 218
+ T T P + +F +L A ++ + L+ F + L N
Sbjct: 72 NDE-TRETQ-PTL--SFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLLKKN 127
Query: 219 DI-RLNEKD-LKDAVKAVRGHQRVTDQNPEGKY---------QALEKYGNDLTELARSGK 267
DI RL+ + + + H + + G + LE + +L +LA+ G+
Sbjct: 128 DISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLNQLAKQGQ 187
Query: 268 LDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRK 327
+DP+IGRD E+ R IQ+L RR KNNP+++GE GVGKTAIAEGLA RIV G+VPE +Q
Sbjct: 188 IDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQRSV 247
Query: 328 LISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGA-MDA 386
+ SLD+ SL+AGT YRGDFEKR K++LK++ K ILFIDE+HTIIGAG SG +DA
Sbjct: 248 IYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEK-DAILFIDEIHTIIGAGAASGGQVDA 306
Query: 387 SNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRE 446
+N++KP+L G+LRCIG+TT EY N EK+ AL RRFQ++ +PS+++T IL GL+
Sbjct: 307 ANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKT 366
Query: 447 RYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITS---KPIEL 503
+YE HH V+ +YI ER LPDKAID++DEA A+ ++ S K + +
Sbjct: 367 KYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASRRKKTVGV 426
Query: 504 DEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSL 542
EI+ V K M ++ K+ + K+ L L+ + L
Sbjct: 427 AEIESMVAK--MARIPEKS-VSSSDKDILKNLDQKMKML 462
Score = 610 (219.8 bits), Expect = 3.7e-133, Sum P(2) = 3.7e-133
Identities = 128/310 (41%), Positives = 197/310 (63%)
Query: 630 DIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDP 689
+I +V+K IP S+ S+++ L L++ + V GQD A+ + +AI+ +RAGL
Sbjct: 428 EIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLTRAGLGAE 487
Query: 690 ARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYV 749
+P+ SF+F GPTGVGKTE+ L+ L E L+R DMSEY E+HSVSRL+GAPPGYV
Sbjct: 488 HKPVGSFLFAGPTGVGKTEVTLQLSKLL-GIE--LLRFDMSEYGERHSVSRLIGAPPGYV 544
Query: 750 GYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVV 809
GY++GG LT+ V + P+SVVL DEIEKAH D+FN+LLQ++D+G +TD+ GR F N ++
Sbjct: 545 GYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVIL 604
Query: 810 IMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDS 869
+MT+N G + ET V+ S + + + ++ F PEF NR+D I F LD
Sbjct: 605 VMTTNAG---VAET---VKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDE 658
Query: 870 KEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENE 929
+ I ++V+ + ++ +L + + L +++A L + G+D GARP+ RVIQ+ ++
Sbjct: 659 RVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKP 718
Query: 930 IAVAILKGDI 939
+A +L G +
Sbjct: 719 LANELLFGSL 728
Score = 57 (25.1 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 182 LSNAQRIKKEMEDDFVSVEHLLLAFLSDD 210
L+ A ++ +F++VEHLLLA L +D
Sbjct: 10 LNGAFARARDKRHEFMTVEHLLLALLEND 38
Score = 41 (19.5 bits), Expect = 9.1e-61, Sum P(2) = 9.1e-61
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 54 ILPPNDVV---SAKLSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEK 100
++P ND LSF V FH + RS TG + + F+E+
Sbjct: 68 LIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAI-FSEQ 116
>TIGR_CMR|VC_1144 [details] [associations]
symbol:VC_1144 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006508 GO:GO:0008233 Gene3D:1.10.1780.10 InterPro:IPR023150
KO:K03694 OMA:DRETQPT ProtClustDB:PRK11034 GO:GO:0004176
InterPro:IPR019489 PANTHER:PTHR11638:SF14 Pfam:PF10431
SMART:SM01086 TIGRFAMs:TIGR02639 HSSP:P15716 PIR:E82236
RefSeq:NP_230789.1 ProteinModelPortal:Q9KSW2 SMR:Q9KSW2
DNASU:2614577 GeneID:2614577 KEGG:vch:VC1144 PATRIC:20081380
Uniprot:Q9KSW2
Length = 756
Score = 716 (257.1 bits), Expect = 3.7e-133, Sum P(2) = 3.7e-133
Identities = 176/459 (38%), Positives = 254/459 (55%)
Query: 107 GAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTK-----VLQATEDFISK 161
GA AR + + EHL+ ALLE + +A D + + T I K
Sbjct: 12 GAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQTTPLIPK 71
Query: 162 QPKVTGATSGPIVGSNFGLLLSNAQ-RIKKEMEDDFVSVEHLLLAFLSDDRFGRLLF--N 218
+ T T P + +F +L A ++ + L+ F + L N
Sbjct: 72 NDE-TRETQ-PTL--SFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLLKKN 127
Query: 219 DI-RLNEKD-LKDAVKAVRGHQRVTDQNPEGKY---------QALEKYGNDLTELARSGK 267
DI RL+ + + + H + + G + LE + +L +LA+ G+
Sbjct: 128 DISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLNQLAKQGQ 187
Query: 268 LDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRK 327
+DP+IGRD E+ R IQ+L RR KNNP+++GE GVGKTAIAEGLA RIV G+VPE +Q
Sbjct: 188 IDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQRSV 247
Query: 328 LISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGA-MDA 386
+ SLD+ SL+AGT YRGDFEKR K++LK++ K ILFIDE+HTIIGAG SG +DA
Sbjct: 248 IYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEK-DAILFIDEIHTIIGAGAASGGQVDA 306
Query: 387 SNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRE 446
+N++KP+L G+LRCIG+TT EY N EK+ AL RRFQ++ +PS+++T IL GL+
Sbjct: 307 ANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKT 366
Query: 447 RYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITS---KPIEL 503
+YE HH V+ +YI ER LPDKAID++DEA A+ ++ S K + +
Sbjct: 367 KYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASRRKKTVGV 426
Query: 504 DEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSL 542
EI+ V K M ++ K+ + K+ L L+ + L
Sbjct: 427 AEIESMVAK--MARIPEKS-VSSSDKDILKNLDQKMKML 462
Score = 610 (219.8 bits), Expect = 3.7e-133, Sum P(2) = 3.7e-133
Identities = 128/310 (41%), Positives = 197/310 (63%)
Query: 630 DIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDP 689
+I +V+K IP S+ S+++ L L++ + V GQD A+ + +AI+ +RAGL
Sbjct: 428 EIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLTRAGLGAE 487
Query: 690 ARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYV 749
+P+ SF+F GPTGVGKTE+ L+ L E L+R DMSEY E+HSVSRL+GAPPGYV
Sbjct: 488 HKPVGSFLFAGPTGVGKTEVTLQLSKLL-GIE--LLRFDMSEYGERHSVSRLIGAPPGYV 544
Query: 750 GYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVV 809
GY++GG LT+ V + P+SVVL DEIEKAH D+FN+LLQ++D+G +TD+ GR F N ++
Sbjct: 545 GYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVIL 604
Query: 810 IMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDS 869
+MT+N G + ET V+ S + + + ++ F PEF NR+D I F LD
Sbjct: 605 VMTTNAG---VAET---VKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDE 658
Query: 870 KEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENE 929
+ I ++V+ + ++ +L + + L +++A L + G+D GARP+ RVIQ+ ++
Sbjct: 659 RVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKP 718
Query: 930 IAVAILKGDI 939
+A +L G +
Sbjct: 719 LANELLFGSL 728
Score = 57 (25.1 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 182 LSNAQRIKKEMEDDFVSVEHLLLAFLSDD 210
L+ A ++ +F++VEHLLLA L +D
Sbjct: 10 LNGAFARARDKRHEFMTVEHLLLALLEND 38
Score = 41 (19.5 bits), Expect = 9.1e-61, Sum P(2) = 9.1e-61
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 54 ILPPNDVV---SAKLSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEK 100
++P ND LSF V FH + RS TG + + F+E+
Sbjct: 68 LIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAI-FSEQ 116
>UNIPROTKB|P0ABH9 [details] [associations]
symbol:clpA "ClpA" species:83333 "Escherichia coli K-12"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IDA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR013461
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006508 eggNOG:COG0542
Gene3D:1.10.1780.10 InterPro:IPR023150 EMBL:M31045 EMBL:M23220
PIR:B64827 RefSeq:NP_415403.1 RefSeq:YP_489155.1 PDB:1K6K PDB:1KSF
PDB:1LZW PDB:1MBU PDB:1MBV PDB:1MBX PDB:1MG9 PDB:1R6B PDB:1R6C
PDB:1R6O PDB:1R6Q PDBsum:1K6K PDBsum:1KSF PDBsum:1LZW PDBsum:1MBU
PDBsum:1MBV PDBsum:1MBX PDBsum:1MG9 PDBsum:1R6B PDBsum:1R6C
PDBsum:1R6O PDBsum:1R6Q ProteinModelPortal:P0ABH9 SMR:P0ABH9
DIP:DIP-35409N IntAct:P0ABH9 PaxDb:P0ABH9 PRIDE:P0ABH9
EnsemblBacteria:EBESCT00000004427 EnsemblBacteria:EBESCT00000004428
EnsemblBacteria:EBESCT00000004429 EnsemblBacteria:EBESCT00000016540
GeneID:12932326 GeneID:945764 KEGG:ecj:Y75_p0855 KEGG:eco:b0882
PATRIC:32116973 EchoBASE:EB0154 EcoGene:EG10156
HOGENOM:HOG000218210 KO:K03694 OMA:DRETQPT ProtClustDB:PRK11034
BioCyc:EcoCyc:EG10156-MONOMER BioCyc:ECOL316407:JW0866-MONOMER
BioCyc:MetaCyc:EG10156-MONOMER EvolutionaryTrace:P0ABH9
Genevestigator:P0ABH9 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086
TIGRFAMs:TIGR02639 Uniprot:P0ABH9
Length = 758
Score = 707 (253.9 bits), Expect = 7.6e-133, Sum P(2) = 7.6e-133
Identities = 169/448 (37%), Positives = 251/448 (56%)
Query: 112 ARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGAT-- 169
AR + + + EHL+ ALL AR L D + Q E FI + V A+
Sbjct: 17 AREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEE 74
Query: 170 ---SGPIVGSNFGLLLSNAQ-RIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEK 225
+ P + +F +L A ++ ++ L+ F + L ++
Sbjct: 75 ERDTQPTL--SFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL 132
Query: 226 DLKDAVK-AVRGHQRVTDQNP---------EGKYQALEKYGNDLTELARSGKLDPVIGRD 275
D+ + + R + +P G + +E + +L +LAR G +DP+IGR+
Sbjct: 133 DVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGRE 192
Query: 276 DEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMAS 335
E+ R IQ+L RR KNNP+++GE GVGKTAIAEGLA RIV+GDVPE + + + SLD+ S
Sbjct: 193 KELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252
Query: 336 LVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGA-MDASNMLKPML 394
L+AGT YRGDFEKR KA+LK++ + I LFIDE+HTIIGAG SG +DA+N++KP+L
Sbjct: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIGAGAASGGQVDAANLIKPLL 311
Query: 395 GRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGV 454
G++R IG+TT E+ N EKD AL RRFQ++ +PS+E T+ I+ GL+ +YE HH V
Sbjct: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV 371
Query: 455 KIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSK---PIELDEIDRAVL 511
+ +YI +R LPDKAID++DEA A+ ++ SK + + +I+ V
Sbjct: 372 RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA 431
Query: 512 KLEM--EKLSLKNDTD--KASKERLSKL 535
++ EK ++D D K +RL L
Sbjct: 432 RIARIPEKSVSQSDRDTLKNLGDRLKML 459
Score = 616 (221.9 bits), Expect = 7.6e-133, Sum P(2) = 7.6e-133
Identities = 134/317 (42%), Positives = 202/317 (63%)
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
++ V DI +V++ IP S+ QS+R+ L L + L V GQD A++++ +AI+ +
Sbjct: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL +P+ SF+F GPTGVGKTE+ L+ L E L+R DMSEYME+H+VSRL+
Sbjct: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLI 534
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVG+++GG LT+ V + P++V+L DEIEKAH DVFNILLQ++D+G +TD+ GR
Sbjct: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594
Query: 803 SFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYI 862
F N V++MT+N G + ET + S +++ +E ++ F PEF NR+D I
Sbjct: 595 DFRNVVLVMTTNAG---VRETERK---SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648
Query: 863 VFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVI 922
F L + I ++V+ + ++ +L QK + L ++EA L G+D GARP+ RVI
Sbjct: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708
Query: 923 QQLVENEIAVAILKGDI 939
Q ++ +A +L G +
Sbjct: 709 QDNLKKPLANELLFGSL 725
Score = 57 (25.1 bits), Expect = 7.8e-66, Sum P(3) = 7.8e-66
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 180 LLLSNAQRIKKEMEDDFVSVEHLLLAFLSD 209
L L+ A +E +F++VEHLLLA LS+
Sbjct: 8 LSLNMAFARAREHRHEFMTVEHLLLALLSN 37
Score = 43 (20.2 bits), Expect = 7.8e-66, Sum P(3) = 7.8e-66
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 521 KNDTDKASKERLSKLEHDLNSL 542
+ D +K K L +LE D NS+
Sbjct: 260 RGDFEKRFKALLKQLEQDTNSI 281
>TIGR_CMR|CBU_1196 [details] [associations]
symbol:CBU_1196 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:227377 "Coxiella burnetii RSA 493"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 OMA:DRETQPT GO:GO:0004176
InterPro:IPR019489 PANTHER:PTHR11638:SF14 Pfam:PF10431
SMART:SM01086 TIGRFAMs:TIGR02639 RefSeq:NP_820191.1 HSSP:P15716
ProteinModelPortal:Q83CD0 SMR:Q83CD0 GeneID:1209100
KEGG:cbu:CBU_1196 PATRIC:17931135 ProtClustDB:CLSK914606
BioCyc:CBUR227377:GJ7S-1184-MONOMER Uniprot:Q83CD0
Length = 753
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 143/292 (48%), Positives = 199/292 (68%)
Query: 252 LEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLA 311
+E Y +L ARSG++DP+IGR +E+ RCIQ L RRTKNNP+++G+ GVGKTAI EGLA
Sbjct: 173 IELYATNLNAKARSGRVDPLIGRQEELLRCIQTLCRRTKNNPLLVGDAGVGKTAIVEGLA 232
Query: 312 QRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDEL 371
Q IV+ VP+ L + + +LD+ L+AGT YRGDFEKR K+VLK +++ G +I FIDE+
Sbjct: 233 QLIVQNRVPKPLAHATIYALDLGILLAGTKYRGDFEKRFKSVLKALSREPGAVI-FIDEI 291
Query: 372 HTIIGAGNQSGA-MDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCD 430
H +IGAG+ +G MDASN++KP+L GELRC+GATT E+RN+ KD AL RRFQ++
Sbjct: 292 HNLIGAGSATGGTMDASNLIKPLLTTGELRCMGATTYEEFRNFFSKDHALLRRFQRIDVK 351
Query: 431 QPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA 490
+PSV +T+ IL+GLR RYE +H ++ RYI++R LPDKAID++DEA A
Sbjct: 352 EPSVTDTVKILQGLRSRYENYHQIRYTPDALKRAVELSARYISDRQLPDKAIDVIDEAGA 411
Query: 491 --KLKMEITSKP-IELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDL 539
+L+ + K I + EI+ V K M ++ + T ++ KE L L L
Sbjct: 412 FEQLQSDEERKTLITVKEIESIVAK--MARIPIHTIT-QSDKELLIDLPKQL 460
Score = 676 (243.0 bits), Expect = 1.8e-132, Sum P(2) = 1.8e-132
Identities = 165/411 (40%), Positives = 241/411 (58%)
Query: 100 KAWEGIVG-AVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDF 158
KA E + A AR + + EHL+ ALL+ + A R+L+ G + ++ F
Sbjct: 4 KALEKTLNRAFSQAREKRHEFITVEHLLLALLDNPE--AGRVLSACGANLERLRAGLGIF 61
Query: 159 ISKQ-PKVTGATSGPIVGS-NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLL 216
I + P + I + +F +L A + V+ ++L A S+ +
Sbjct: 62 IDETTPHIPLNVERDIQPTLSFQRVLQRAIYDVQCNGTPEVTGTNILTAIFSEPESQAVY 121
Query: 217 F-NDIRLNEKDL----KDAVKAVRGHQR-VTD--QNPE--GKYQA------LEKYGNDLT 260
F + ++ D+ + R R ++D Q PE G + +E Y +L
Sbjct: 122 FLSQENISRIDIINYTTQGITKPRQEARFLSDSQQLPEASGMQETTVDENLIELYATNLN 181
Query: 261 ELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVP 320
ARSG++DP+IGR +E+ RCIQ L RRTKNNP+++G+ GVGKTAI EGLAQ IV+ VP
Sbjct: 182 AKARSGRVDPLIGRQEELLRCIQTLCRRTKNNPLLVGDAGVGKTAIVEGLAQLIVQNRVP 241
Query: 321 ETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQ 380
+ L + + +LD+ L+AGT YRGDFEKR K+VLK +++ G +I FIDE+H +IGAG+
Sbjct: 242 KPLAHATIYALDLGILLAGTKYRGDFEKRFKSVLKALSREPGAVI-FIDEIHNLIGAGSA 300
Query: 381 SGA-MDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTIS 439
+G MDASN++KP+L GELRC+GATT E+RN+ KD AL RRFQ++ +PSV +T+
Sbjct: 301 TGGTMDASNLIKPLLTTGELRCMGATTYEEFRNFFSKDHALLRRFQRIDVKEPSVTDTVK 360
Query: 440 ILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA 490
IL+GLR RYE +H ++ RYI++R LPDKAID++DEA A
Sbjct: 361 ILQGLRSRYENYHQIRYTPDALKRAVELSARYISDRQLPDKAIDVIDEAGA 411
Score = 645 (232.1 bits), Expect = 1.8e-132, Sum P(2) = 1.8e-132
Identities = 147/359 (40%), Positives = 229/359 (63%)
Query: 586 LNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREE-----VTDLDIAEIVSKWTG 640
L RA EL IS RQL + ++ + + L +E +T +I IV+K
Sbjct: 382 LKRAVELS-ARYIS-DRQLPDKAIDVIDEAGAFEQLQSDEERKTLITVKEIESIVAKMAR 439
Query: 641 IPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMG 700
IP+ ++ QS++E L+ L + L + V GQ AV+S+ +AI+ SRAGL++ +P+ SF+ G
Sbjct: 440 IPIHTITQSDKELLIDLPKQLKRVVFGQSQAVESLCNAIKLSRAGLNNADKPVGSFLLAG 499
Query: 701 PTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEV 760
PTGVGKTE+ + LA L E L+R DMSEYME+H+VSRL+GAPPGYVG+++GG LTE+
Sbjct: 500 PTGVGKTEVTRQLAQAL-GIE--LIRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEI 556
Query: 761 VRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYI 820
+R++P++V+L DEIEKAH D+FNILLQ++D G +TD+ GR F + +++MT+N G+
Sbjct: 557 IRKQPHAVLLLDEIEKAHPDIFNILLQVMDYGYLTDNTGRKADFRHVIIVMTTNAGA--- 613
Query: 821 LETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQM 880
E L+ + + + M+++ + + F PEF NR+D I F+ LD+ I KIV+
Sbjct: 614 -EQLE--RGAIGFAVQDMEQENLGAIKHYFSPEFRNRLDAVIQFKYLDTTTILKIVDKFT 670
Query: 881 NRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
++D+LK+K I L + +A L G++ GARP+ R+IQ+ ++ IA +L ++
Sbjct: 671 RELRDQLKEKGIRLTISSDAKQWLAERGYNEKMGARPMARLIQEKLKVPIANQLLFSEL 729
>TIGR_CMR|SO_2626 [details] [associations]
symbol:SO_2626 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086
TIGRFAMs:TIGR02639 OMA:DAKHVIL HSSP:P15716 RefSeq:NP_718211.1
ProteinModelPortal:Q8EDW5 SMR:Q8EDW5 GeneID:1170328
KEGG:son:SO_2626 PATRIC:23524879 ProtClustDB:CLSK906805
Uniprot:Q8EDW5
Length = 755
Score = 692 (248.7 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 177/453 (39%), Positives = 251/453 (55%)
Query: 108 AVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTG 167
A AR + + EHL+ AL++ A+ L G + K+ FI + +
Sbjct: 13 AFQQAREARHEYMTVEHLLLALIDNP--AAQEALIACGANLDKLRDEVASFIQQTTPIIA 70
Query: 168 -----ATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLF---ND 219
+ P +G F +L A + + V+ ++L+A S+ + +D
Sbjct: 71 DMDDDKETQPTLG--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAVYLLRRSD 128
Query: 220 I-RLNEKDL------KDAVKAVRGHQRVTDQNPEGKYQA--LEKYGNDLTELARSGKLDP 270
I RL+ + K+ Q +++ E + L ++ +L +LA+ G +DP
Sbjct: 129 ISRLDVVNFISHGFSKNEDSDAHQDQERSEEQAEASEERSMLSQFATNLNQLAKQGVIDP 188
Query: 271 VIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLIS 330
+IGRD EI R IQ L RR KNNP+++GE GVGKTAIAEGLA RIV VPE + + S
Sbjct: 189 LIGRDQEIERAIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNHQVPEVMAQATVYS 248
Query: 331 LDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGA-MDASNM 389
LD+ SL+AGT YRGDFEKR K +LKE++ ++ ILFIDE+HTIIGAG SG MDASN+
Sbjct: 249 LDLGSLLAGTKYRGDFEKRFKNLLKELS-ADKHAILFIDEIHTIIGAGAASGGVMDASNL 307
Query: 390 LKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYE 449
LKP+L G LRC+G+TT EY++ EKD AL RRFQ+V ++PSV T IL GL+ +YE
Sbjct: 308 LKPLLSSGNLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETTKILMGLKSKYE 367
Query: 450 LHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSK---PIELDEI 506
+HGV+ ++I +R LPDKAID++DEA A++ M SK I EI
Sbjct: 368 EYHGVRYTQAAINSAAVLSAKHINDRHLPDKAIDVIDEAGARMAMLPQSKRKKTIGQAEI 427
Query: 507 DRAVLKLEMEKLSLKNDTDKASKERLSKLEHDL 539
+ V K+ + TDK + L LE +L
Sbjct: 428 ETIVAKIARIPEKSVSATDK---DLLRNLERNL 457
Score = 621 (223.7 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 135/319 (42%), Positives = 206/319 (64%)
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
++ + +I IV+K IP S+ ++++ L LE L V GQD A+++++ AIR S
Sbjct: 419 KKTIGQAEIETIVAKIARIPEKSVSATDKDLLRNLERNLKMVVFGQDKAIETLSSAIRLS 478
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
R+GL +P+ SF+F GPTGVGKTE+ LA+ L LVR DMSEYME H+VSRL+
Sbjct: 479 RSGLGTDKKPVGSFLFAGPTGVGKTEVTNQLANCL---GMKLVRFDMSEYMESHTVSRLI 535
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVGY++GG LT+ V + P+ VVL DEIEKAH DV+N+LLQ++D G +TD+ GR
Sbjct: 536 GAPPGYVGYDQGGLLTDAVIKNPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKA 595
Query: 803 SFTNCVVIMTSNIGSHYILETLQ-SVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEY 861
F + ++MT+N G + ET++ S+ +++ + + + E+ R F PEF NR+D
Sbjct: 596 DFRHVTLVMTTNAG---VQETIRKSIGFTQQ---DHTQDALSEINR-VFSPEFRNRLDSI 648
Query: 862 IVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRV 921
I F LD I+K+V+ + ++ +L K + L + EA TLL G+D + GARP+ RV
Sbjct: 649 IWFNHLDMTIIAKVVDKFLVELQAQLDAKHVVLEVSDEARTLLAQKGYDKSMGARPMARV 708
Query: 922 IQQLVENEIAVAILKGDIK 940
+ +L++ +A +L G+++
Sbjct: 709 VTELIKRPLADELLFGELE 727
Score = 49 (22.3 bits), Expect = 7.1e-63, Sum P(2) = 7.1e-63
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 173 IVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSD 209
++ + + L+ A + +E ++++VEHLLLA + +
Sbjct: 1 MLNKDLEVTLNLAFQQAREARHEYMTVEHLLLALIDN 37
>UNIPROTKB|Q9KN49 [details] [associations]
symbol:VC_A0116 "ClpB protein" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0006508 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0017111
GO:GO:0008233 Gene3D:1.10.1780.10 InterPro:IPR023150
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:Q9RA63 KO:K11907
InterPro:IPR017729 TIGRFAMs:TIGR03345 TCDB:9.A.34.1.1 PIR:G82499
RefSeq:NP_232517.1 ProteinModelPortal:Q9KN49 DNASU:2612221
GeneID:2612221 KEGG:vch:VCA0116 PATRIC:20084811 OMA:MQEVLYP
ProtClustDB:CLSK2392952 Uniprot:Q9KN49
Length = 869
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 275/736 (37%), Positives = 409/736 (55%)
Query: 120 VETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKV-TGATSGPIVGSNF 178
V E+ + LL+ R +L +AG + +V QA S++ + T P++
Sbjct: 36 VTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTYSREQVLDTYPAFSPLLVELL 95
Query: 179 --GLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRL----NEKDLKDAVK 232
LLS+ + + E+ + L A DR+ L F I L N ++LK
Sbjct: 96 QEAWLLSSTELEQAELRSGAI----FLAALTRADRY--LSFKLISLFEGINRENLKKHFA 149
Query: 233 AVRGHQRVT-----DQNPEGKYQA-----LEKYGNDLTELARSGKLDPVIGRDDEIRRCI 282
+ T D+N QA L ++ ++TE AR+G+LDPV+ R++E+ +
Sbjct: 150 MILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARNGELDPVLSRENELNLMV 209
Query: 283 QILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCY 342
IL RR KNNP+++GE GVGK+A+ EGLA R+V G VP LQN +L SLD+ L AG
Sbjct: 210 DILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASV 269
Query: 343 RGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCI 402
+G+FEKRLK V+ + +S IILFIDE HT+IG+GNQ G DA+N+LKP L RGEL +
Sbjct: 270 KGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTV 329
Query: 403 GATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXX 462
ATT EY+ Y EKDPAL RRFQ V D+P+++ + ILRGL YE H V I
Sbjct: 330 AATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALK 389
Query: 463 XXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAV--LKLEMEKLSL 520
RYI+ R LPDKAID++D A A++ + +T+ P L ++ +LE++ L
Sbjct: 390 AAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLER 449
Query: 521 KNDT-DKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEA 579
+ ERL L + + + ++ L W ++K L+ I +++ E+ ++ +A
Sbjct: 450 AQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSLVESIIALRAELMELS---QA 506
Query: 580 AERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWT 639
E+D D ++ ++ L+E + L + L+ +V IAE+++ WT
Sbjct: 507 QEQDPD----------HLLVVRTALQEQYQALDAIDHA-ERLMHPQVDADQIAEVIADWT 555
Query: 640 GIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFM 699
G+P+ + E K+ L +L + + GQ+ A++ + + +RA L P RP +F+ +
Sbjct: 556 GVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLV 615
Query: 700 GPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTE 759
GP+GVGKTE LA+ L+ + L I+MSEY EKH+VSRL+G+PPGYVGY EGG LTE
Sbjct: 616 GPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTE 675
Query: 760 VVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHY 819
+R+ PYSVVL DE+EKAH +V NI Q D G I D +GR + N V +TSN+G
Sbjct: 676 AIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQT 735
Query: 820 ILETLQSVQDSKEAVY 835
I++ EA+Y
Sbjct: 736 IVDYADEPAKLDEALY 751
>TIGR_CMR|VC_A0116 [details] [associations]
symbol:VC_A0116 "clpB protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0017111 GO:GO:0008233
Gene3D:1.10.1780.10 InterPro:IPR023150 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 HSSP:Q9RA63 KO:K11907 InterPro:IPR017729
TIGRFAMs:TIGR03345 TCDB:9.A.34.1.1 PIR:G82499 RefSeq:NP_232517.1
ProteinModelPortal:Q9KN49 DNASU:2612221 GeneID:2612221
KEGG:vch:VCA0116 PATRIC:20084811 OMA:MQEVLYP
ProtClustDB:CLSK2392952 Uniprot:Q9KN49
Length = 869
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 275/736 (37%), Positives = 409/736 (55%)
Query: 120 VETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKV-TGATSGPIVGSNF 178
V E+ + LL+ R +L +AG + +V QA S++ + T P++
Sbjct: 36 VTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTYSREQVLDTYPAFSPLLVELL 95
Query: 179 --GLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRL----NEKDLKDAVK 232
LLS+ + + E+ + L A DR+ L F I L N ++LK
Sbjct: 96 QEAWLLSSTELEQAELRSGAI----FLAALTRADRY--LSFKLISLFEGINRENLKKHFA 149
Query: 233 AVRGHQRVT-----DQNPEGKYQA-----LEKYGNDLTELARSGKLDPVIGRDDEIRRCI 282
+ T D+N QA L ++ ++TE AR+G+LDPV+ R++E+ +
Sbjct: 150 MILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARNGELDPVLSRENELNLMV 209
Query: 283 QILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCY 342
IL RR KNNP+++GE GVGK+A+ EGLA R+V G VP LQN +L SLD+ L AG
Sbjct: 210 DILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASV 269
Query: 343 RGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPMLGRGELRCI 402
+G+FEKRLK V+ + +S IILFIDE HT+IG+GNQ G DA+N+LKP L RGEL +
Sbjct: 270 KGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTV 329
Query: 403 GATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXX 462
ATT EY+ Y EKDPAL RRFQ V D+P+++ + ILRGL YE H V I
Sbjct: 330 AATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALK 389
Query: 463 XXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAV--LKLEMEKLSL 520
RYI+ R LPDKAID++D A A++ + +T+ P L ++ +LE++ L
Sbjct: 390 AAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLER 449
Query: 521 KNDT-DKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEA 579
+ ERL L + + + ++ L W ++K L+ I +++ E+ ++ +A
Sbjct: 450 AQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSLVESIIALRAELMELS---QA 506
Query: 580 AERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWT 639
E+D D ++ ++ L+E + L + L+ +V IAE+++ WT
Sbjct: 507 QEQDPD----------HLLVVRTALQEQYQALDAIDHA-ERLMHPQVDADQIAEVIADWT 555
Query: 640 GIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFM 699
G+P+ + E K+ L +L + + GQ+ A++ + + +RA L P RP +F+ +
Sbjct: 556 GVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLV 615
Query: 700 GPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTE 759
GP+GVGKTE LA+ L+ + L I+MSEY EKH+VSRL+G+PPGYVGY EGG LTE
Sbjct: 616 GPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTE 675
Query: 760 VVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHY 819
+R+ PYSVVL DE+EKAH +V NI Q D G I D +GR + N V +TSN+G
Sbjct: 676 AIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQT 735
Query: 820 ILETLQSVQDSKEAVY 835
I++ EA+Y
Sbjct: 736 IVDYADEPAKLDEALY 751
>TIGR_CMR|CJE_1251 [details] [associations]
symbol:CJE_1251 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00871 SMART:SM00382 GO:GO:0005524
GO:GO:0006508 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086
TIGRFAMs:TIGR02639 RefSeq:YP_179239.1 ProteinModelPortal:Q5HTZ6
SMR:Q5HTZ6 STRING:Q5HTZ6 GeneID:3231758 KEGG:cjr:CJE1251
PATRIC:20044298 OMA:EYITVDH ProtClustDB:CLSK879089
BioCyc:CJEJ195099:GJC0-1277-MONOMER Uniprot:Q5HTZ6
Length = 709
Score = 647 (232.8 bits), Expect = 8.9e-115, Sum P(2) = 8.9e-115
Identities = 149/356 (41%), Positives = 217/356 (60%)
Query: 184 NAQRIKKEMEDDF-VSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVK----AVRGHQ 238
N Q IK+E+E V ++ +LL+ S ++ + D EK ++D+ ++ H
Sbjct: 68 NNQVIKQEIEPTISVVLDEILLS--SKNKNNEIKIIDFL--EKLIQDSRSYSSYLLKKHN 123
Query: 239 ----RVTD-QNPEGKYQALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNP 293
++ + QN E Q L + +DLT LA++GK+DP+IGR E+ R +QILSRR KNNP
Sbjct: 124 INLNKIQELQNHEN-IQNLNNHTSDLTLLAQNGKIDPLIGRKFELERMMQILSRRKKNNP 182
Query: 294 VIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAV 353
+++GE GVGKTAI EGLA I VP+ LQN K+ SLDMAS++AGT YRGDFEKR+K +
Sbjct: 183 ILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDMASILAGTKYRGDFEKRIKEI 242
Query: 354 LKEVTKSNGQIILFIDELHTIIGAGNQSGA-MDASNMLKPMLGRGELRCIGATTLNEYRN 412
L E+ K I LFIDE+HTI+GAG+ + D SN+LKP L G L+CIGATT EY+N
Sbjct: 243 LNELEKIPNAI-LFIDEIHTIVGAGSTGESHTDFSNLLKPALSNGTLKCIGATTFMEYKN 301
Query: 413 YIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYI 472
+K+ L RRF ++ D+PS E ++ IL+GL+ +YE H +K+ ++
Sbjct: 302 TFDKNKPLSRRFAKINVDEPSQEESLQILKGLKNKYEEFHHIKLNDEILQYAVIWGKKFF 361
Query: 473 TERFLPDKAIDLVDEAAAKLKMEITSKP-IELDEIDRAVLKLEMEKLSLKNDTDKA 527
++FLPD AIDL+DE A + +K L +++ + K+ + D +KA
Sbjct: 362 NDKFLPDCAIDLIDELGASFALNPKAKKNANLKDLENVLAKMTHHHKIFEFDQNKA 417
Score = 512 (185.3 bits), Expect = 8.9e-115, Sum P(2) = 8.9e-115
Identities = 114/313 (36%), Positives = 184/313 (58%)
Query: 630 DIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDP 689
D+ +++K T + + + L+ L+ L ++ GQD + S+ ++++S AG +
Sbjct: 395 DLENVLAKMTHHH-KIFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNS 453
Query: 690 ARPIASFMFMGPTGVGKTELGKALADFL-FNTENALVRIDMSEYMEKHSVSRLVGAPPGY 748
P F+F G +GVGKTEL KALA+FL N E R DMSEY EKH++S+L+G+P GY
Sbjct: 454 NTPRGVFLFTGSSGVGKTELCKALAEFLGLNLE----RFDMSEYAEKHTISKLIGSPAGY 509
Query: 749 VGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCV 808
+G+EEGG L+ +R+ P+S+VLFDEIEKAH D+ N LQ+ D+ +TD+ G V F N +
Sbjct: 510 IGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTI 569
Query: 809 VIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELA-RQTFRPEFLNRIDEYIVFQPL 867
+IMTSN+G +++S E + ++ A + F PEF+NRID+ + F L
Sbjct: 570 IIMTSNLG----------LKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDL 619
Query: 868 DSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVE 927
+ + KI+E +++ + L K+ + +A L ++ FG R +KR+I + +
Sbjct: 620 NDAILVKIIEKELDEISKNLNNIKLSVD--DKAKIYLAKKAYNKEFGVRLLKRIISEEIG 677
Query: 928 NEIAVAILKGDIK 940
+I+ IL G +K
Sbjct: 678 EKISDEILFGKLK 690
Score = 59 (25.8 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 177 NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFL---SD--DRFGRLLFNDIRLNEKDLKDAV 231
N L NA+ + +FV+ EH+L A L +D D F D+ L E +LK+ +
Sbjct: 6 NLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKDIFEEFSDGDLELLETELKNYI 65
Score = 40 (19.1 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 821 LETLQSVQDSKEAVYEVMK---KQV-VELARQTFRPEFLNRIDEYIVFQPLDSKEISKI 875
L ++ D K +Y K K+ V L ++ E +I + I+F L I+KI
Sbjct: 639 LNNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILFGKLKKGGIAKI 697
Score = 40 (19.1 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 31/139 (22%), Positives = 57/139 (41%)
Query: 487 EAAAKLKMEITSKPIEL---DEIDRAVLKLEMEKLSLKNDTDKASKERLS-KLEHDLNSL 542
E L I P L DEI++A L L + ++ + L ++ + +
Sbjct: 513 EEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTIIIM 572
Query: 543 KQKQ--KELNDQWSREKDLMSRIRSIKEEI--DRVNLEMEAAERDYDLNRAAELKYGTMI 598
KE N+ K+ R+IK+ + +N ++ DLN A +K
Sbjct: 573 TSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFIN-RIDKILHFNDLNDAILVKI---- 627
Query: 599 SLQRQLEEAEKNLSEFQKS 617
++++L+E KNL+ + S
Sbjct: 628 -IEKELDEISKNLNNIKLS 645
>GENEDB_PFALCIPARUM|PF14_0063 [details] [associations]
symbol:PF14_0063 "ATP-dependent Clp protease,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
PRINTS:PR00300 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
EMBL:AE014187 GO:GO:0017111 GO:GO:0008233 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03695 HSSP:P03815 RefSeq:XP_001348236.1
ProteinModelPortal:Q8IM28 EnsemblProtists:PF14_0063:mRNA
GeneID:811645 KEGG:pfa:PF14_0063 EuPathDB:PlasmoDB:PF3D7_1406600
HOGENOM:HOG000281371 ProtClustDB:CLSZ2515435 Uniprot:Q8IM28
Length = 1341
Score = 932 (333.1 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 212/586 (36%), Positives = 343/586 (58%)
Query: 258 DLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRG 317
D+ A+ D GR EI+R I+IL R+ K+NP++IGE GVGKTAI E L+ I++
Sbjct: 512 DMVHEAQEKGDDHFFGRKKEIKRIIEILGRKKKSNPLLIGESGVGKTAIIEYLSYLILKD 571
Query: 318 DVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGA 377
+VP L+N ++ L++ ++VAGT YRG+FE+++K +L + K I LFIDE+H I+GA
Sbjct: 572 NVPYHLKNCRIFQLNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNI-LFIDEIHVIVGA 630
Query: 378 GNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENT 437
G+ G++DASN+LKP L L+CIG TT EY +IE D AL RRF V + + + T
Sbjct: 631 GSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKET 690
Query: 438 ISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA--KLKME 495
+L+ ++ YE +H + Y+ PDKAID++DEA K+K E
Sbjct: 691 YKLLKKIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVYQKIKYE 750
Query: 496 -ITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKER------LSKLE---HDLN----- 540
+ + + + + + + ++ + N+ + + +S + H+ N
Sbjct: 751 KFMKQKLRAERLRKIRIHMNTQENNNNNNNNNNNISNNNNDYIISDEDQHIHNNNYGYNN 810
Query: 541 -SLKQKQKEL-NDQ-WSREKDLMSRIR-SIKEEIDRVNLEMEAAERDYDLNRAAELKYGT 596
+ +QKE ND+ ++ D + +R + K+EID E + + +
Sbjct: 811 YDVINQQKEFSNDEDINKLNDDDTNLRKTYKQEIDNKIKNDENGNNNIKTDTNGNILINN 870
Query: 597 MISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVM 656
+ SLQ + +NL E + H ++ +D+ I IVSK + I + E EK++
Sbjct: 871 VESLQNDTYDETRNLIE---NVH--MKYVTSDV-IENIVSKKSSITYIKKNKKEEEKILK 924
Query: 657 LEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF 716
L+E L+K +IGQ+ + ++ + ++ + DP +PI + + G +GVGKT + ++ +
Sbjct: 925 LKEKLNKIIIGQEKVIDILSKYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKY 984
Query: 717 LFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK 776
LFN +N +V I+MSEY++KHSVS+L G+ PGYVGY+EGG+LTE V+++P+S++LFDEIEK
Sbjct: 985 LFNEDNLIV-INMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEK 1043
Query: 777 AHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILE 822
AH +V ++LLQ+LD+G +TDS+G VSF N + MT+N+GS I +
Sbjct: 1044 AHSEVLHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTNVGSDIITD 1089
Score = 153 (58.9 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 34/105 (32%), Positives = 63/105 (60%)
Query: 835 YEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKK-ID 893
Y+ +K + E ++ F PEFLNRIDE I+F+ ++I I++ ++ +K R+K++K I+
Sbjct: 1203 YDELKPDIEEELKKKFLPEFLNRIDEKIIFRQFLKRDIINILQNMIDDLKKRIKKRKNIN 1262
Query: 894 LHYTKEAVTLLGILG---FDPNFGARPVKRVIQQLVENEIAVAIL 935
L K + + +D NFGAR ++R + + +E+ IA ++
Sbjct: 1263 LIIDKNVINYICSDENNIYDMNFGARSIRRALYKYIEDPIAAFLI 1307
Score = 63 (27.2 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
E+ EK + ++ A + A+ +N+ + +HL+ A++ L + IL T L
Sbjct: 64 EYDEKCIKALIMAREVAKNDNENEILLKHLLIAIIRIDSNLVQNILKNFNISLTNFLDKF 123
Query: 156 EDFISKQPK-VTGATSG 171
I+K K T + +G
Sbjct: 124 HVAINKISKSYTNSNNG 140
Score = 48 (22.0 bits), Expect = 9.2e-08, Sum P(3) = 9.2e-08
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 599 SLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSE 650
++ Q A+ NL+E +K SL EE+ D+ I+++ + + +Q+E
Sbjct: 143 NIYEQSGSAQNNLNEQEKKNISLTNEEI---DMKNILNEEDENQVENRKQNE 191
Score = 43 (20.2 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 14/79 (17%), Positives = 41/79 (51%)
Query: 503 LDEIDRAVLKLEMEKLSLKN---DTDKASKERLSKLEH-DLNSLKQKQKELNDQWSREKD 558
L+E ++ + L E++ +KN + D+ E + E+ ++N + +N+ + +
Sbjct: 155 LNEQEKKNISLTNEEIDMKNILNEEDENQVENRKQNENGNVNGNGNVNENVNENINENEK 214
Query: 559 LMSRI--RSIKEEIDRVNL 575
L++ + +K+ +++N+
Sbjct: 215 LLNDFINKHLKDMEEKINI 233
Score = 40 (19.1 bits), Expect = 6.4e-112, Sum P(4) = 6.4e-112
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 19 HNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPND 59
HN + QSGS +++ + SL+ I+ K IL D
Sbjct: 141 HNNI-YEQSGSAQNNLNEQEKKNISLTNEEIDMKNILNEED 180
Score = 40 (19.1 bits), Expect = 1.7e-102, Sum P(4) = 1.7e-102
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 769 VLFDEIEKAHQDVFNILLQLLDD 791
++F + K +D+ NIL ++DD
Sbjct: 1230 IIFRQFLK--RDIINILQNMIDD 1250
Score = 38 (18.4 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 177 NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLS----DDRFGRLLF-NDIRLNEKDLK 228
N L+L NA K FV++ +LL+ ++ + L + ++ +N DLK
Sbjct: 341 NCKLVLHNAVLEAKRKRKIFVNIIDILLSIINIAQEKKHYDFLKYIEELNININDLK 397
Score = 38 (18.4 bits), Expect = 3.8e-109, Sum P(3) = 3.8e-109
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 185 AQRIKKEMEDDFVSVEHLLLAFLSDD 210
A+ + K ++ + ++HLL+A + D
Sbjct: 76 AREVAKNDNENEILLKHLLIAIIRID 101
>UNIPROTKB|Q8IM28 [details] [associations]
symbol:PF14_0063 "ATP-dependent CLP protease, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
PRINTS:PR00300 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
EMBL:AE014187 GO:GO:0017111 GO:GO:0008233 Gene3D:1.10.1780.10
InterPro:IPR023150 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03695 HSSP:P03815 RefSeq:XP_001348236.1
ProteinModelPortal:Q8IM28 EnsemblProtists:PF14_0063:mRNA
GeneID:811645 KEGG:pfa:PF14_0063 EuPathDB:PlasmoDB:PF3D7_1406600
HOGENOM:HOG000281371 ProtClustDB:CLSZ2515435 Uniprot:Q8IM28
Length = 1341
Score = 932 (333.1 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 212/586 (36%), Positives = 343/586 (58%)
Query: 258 DLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRG 317
D+ A+ D GR EI+R I+IL R+ K+NP++IGE GVGKTAI E L+ I++
Sbjct: 512 DMVHEAQEKGDDHFFGRKKEIKRIIEILGRKKKSNPLLIGESGVGKTAIIEYLSYLILKD 571
Query: 318 DVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGA 377
+VP L+N ++ L++ ++VAGT YRG+FE+++K +L + K I LFIDE+H I+GA
Sbjct: 572 NVPYHLKNCRIFQLNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNI-LFIDEIHVIVGA 630
Query: 378 GNQSGAMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENT 437
G+ G++DASN+LKP L L+CIG TT EY +IE D AL RRF V + + + T
Sbjct: 631 GSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKET 690
Query: 438 ISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAA--KLKME 495
+L+ ++ YE +H + Y+ PDKAID++DEA K+K E
Sbjct: 691 YKLLKKIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVYQKIKYE 750
Query: 496 -ITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKER------LSKLE---HDLN----- 540
+ + + + + + + ++ + N+ + + +S + H+ N
Sbjct: 751 KFMKQKLRAERLRKIRIHMNTQENNNNNNNNNNNISNNNNDYIISDEDQHIHNNNYGYNN 810
Query: 541 -SLKQKQKEL-NDQ-WSREKDLMSRIR-SIKEEIDRVNLEMEAAERDYDLNRAAELKYGT 596
+ +QKE ND+ ++ D + +R + K+EID E + + +
Sbjct: 811 YDVINQQKEFSNDEDINKLNDDDTNLRKTYKQEIDNKIKNDENGNNNIKTDTNGNILINN 870
Query: 597 MISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVM 656
+ SLQ + +NL E + H ++ +D+ I IVSK + I + E EK++
Sbjct: 871 VESLQNDTYDETRNLIE---NVH--MKYVTSDV-IENIVSKKSSITYIKKNKKEEEKILK 924
Query: 657 LEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF 716
L+E L+K +IGQ+ + ++ + ++ + DP +PI + + G +GVGKT + ++ +
Sbjct: 925 LKEKLNKIIIGQEKVIDILSKYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKY 984
Query: 717 LFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK 776
LFN +N +V I+MSEY++KHSVS+L G+ PGYVGY+EGG+LTE V+++P+S++LFDEIEK
Sbjct: 985 LFNEDNLIV-INMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEK 1043
Query: 777 AHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILE 822
AH +V ++LLQ+LD+G +TDS+G VSF N + MT+N+GS I +
Sbjct: 1044 AHSEVLHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTNVGSDIITD 1089
Score = 153 (58.9 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 34/105 (32%), Positives = 63/105 (60%)
Query: 835 YEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKK-ID 893
Y+ +K + E ++ F PEFLNRIDE I+F+ ++I I++ ++ +K R+K++K I+
Sbjct: 1203 YDELKPDIEEELKKKFLPEFLNRIDEKIIFRQFLKRDIINILQNMIDDLKKRIKKRKNIN 1262
Query: 894 LHYTKEAVTLLGILG---FDPNFGARPVKRVIQQLVENEIAVAIL 935
L K + + +D NFGAR ++R + + +E+ IA ++
Sbjct: 1263 LIIDKNVINYICSDENNIYDMNFGARSIRRALYKYIEDPIAAFLI 1307
Score = 63 (27.2 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
E+ EK + ++ A + A+ +N+ + +HL+ A++ L + IL T L
Sbjct: 64 EYDEKCIKALIMAREVAKNDNENEILLKHLLIAIIRIDSNLVQNILKNFNISLTNFLDKF 123
Query: 156 EDFISKQPK-VTGATSG 171
I+K K T + +G
Sbjct: 124 HVAINKISKSYTNSNNG 140
Score = 48 (22.0 bits), Expect = 9.2e-08, Sum P(3) = 9.2e-08
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 599 SLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSE 650
++ Q A+ NL+E +K SL EE+ D+ I+++ + + +Q+E
Sbjct: 143 NIYEQSGSAQNNLNEQEKKNISLTNEEI---DMKNILNEEDENQVENRKQNE 191
Score = 43 (20.2 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 14/79 (17%), Positives = 41/79 (51%)
Query: 503 LDEIDRAVLKLEMEKLSLKN---DTDKASKERLSKLEH-DLNSLKQKQKELNDQWSREKD 558
L+E ++ + L E++ +KN + D+ E + E+ ++N + +N+ + +
Sbjct: 155 LNEQEKKNISLTNEEIDMKNILNEEDENQVENRKQNENGNVNGNGNVNENVNENINENEK 214
Query: 559 LMSRI--RSIKEEIDRVNL 575
L++ + +K+ +++N+
Sbjct: 215 LLNDFINKHLKDMEEKINI 233
Score = 40 (19.1 bits), Expect = 6.4e-112, Sum P(4) = 6.4e-112
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 19 HNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPND 59
HN + QSGS +++ + SL+ I+ K IL D
Sbjct: 141 HNNI-YEQSGSAQNNLNEQEKKNISLTNEEIDMKNILNEED 180
Score = 40 (19.1 bits), Expect = 1.7e-102, Sum P(4) = 1.7e-102
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 769 VLFDEIEKAHQDVFNILLQLLDD 791
++F + K +D+ NIL ++DD
Sbjct: 1230 IIFRQFLK--RDIINILQNMIDD 1250
Score = 38 (18.4 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 177 NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLS----DDRFGRLLF-NDIRLNEKDLK 228
N L+L NA K FV++ +LL+ ++ + L + ++ +N DLK
Sbjct: 341 NCKLVLHNAVLEAKRKRKIFVNIIDILLSIINIAQEKKHYDFLKYIEELNININDLK 397
Score = 38 (18.4 bits), Expect = 3.8e-109, Sum P(3) = 3.8e-109
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 185 AQRIKKEMEDDFVSVEHLLLAFLSDD 210
A+ + K ++ + ++HLL+A + D
Sbjct: 76 AREVAKNDNENEILLKHLLIAIIRID 101
>UNIPROTKB|Q81VV9 [details] [associations]
symbol:BAS0081 "Negative regulator of genetic competence
ClpC/MecB" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 1001 (357.4 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 220/465 (47%), Positives = 314/465 (67%)
Query: 494 MEITSKPIELDE--IDRA--VLK-----LEME-KLSLKNDTDKASKERLSKLEHDLNSLK 543
+E +PI +DE +D + +LK E ++S+ +D A+ + + D L
Sbjct: 331 LERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITD-RFLP 389
Query: 544 QKQKELNDQWSREKDLMS-----RIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMI 598
K +L D+ + + L S ++ ++ +++ + E +AA + + +AA L+
Sbjct: 390 DKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQ- 448
Query: 599 SLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLE 658
L+ +LE+ ++ E Q +S EVT DIA +VS WT IP+S L Q+E +KL+ LE
Sbjct: 449 RLREKLEDTKRQWKEQQGKENS----EVTVEDIANVVSTWTRIPVSKLAQTETDKLLNLE 504
Query: 659 EVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF 718
+LH RVIGQD AV +VA A+RR+RAGL DP RPI SF+F+GPTGVGKTEL +ALA+ +F
Sbjct: 505 SILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMF 564
Query: 719 NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAH 778
E+A++RIDMSEYMEKHS SRLVG+PPGYVGYEEGGQLTE VRR+PYSVVL DE+EKAH
Sbjct: 565 GDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAH 624
Query: 779 QDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ---SVQDSKEAVY 835
DVFNILLQ+L+DGR+TDS+GRTV F N +VIMTSN+G+ + +VQD Y
Sbjct: 625 PDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRD-Y 683
Query: 836 EVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLH 895
MK +V++ ++ FRPEFLNRIDE IVF L+ K I +IV + +N++ +RLK+++I+LH
Sbjct: 684 SDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELH 743
Query: 896 YTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
T+ A++ + GFD +GARP++R IQ+ VE+ ++ +LKG I+
Sbjct: 744 LTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIE 788
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 203/473 (42%), Positives = 294/473 (62%)
Query: 97 FTEKAWEGI-VGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
FTE+A + + + +A R+ + + TEH++ L+ + +G+A + L G KV +
Sbjct: 6 FTERAQKVLALSQEEAIRIGHNNI-GTEHILLGLVREGEGIAAKALIALGLSPEKVQKEV 64
Query: 156 EDFISKQPKVTGATS-GPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--F 212
E I + + + P L + A+++ +V EH+LL + +
Sbjct: 65 EALIGRGTEASQTVHYTPRAKKVIELSMDEARKLGHS----YVGTEHILLGLIREGEGVA 120
Query: 213 GRLLFN-DIRLNEK-----DLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSG 266
R+L N + LN+ L + +A GHQ + N L+ DLT +AR
Sbjct: 121 ARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTN--ANTPTLDSLARDLTVVAREN 178
Query: 267 KLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNR 326
+LDPVIGR EI+R I++LSRRTKNNPV+IGEPGVGKTAIAEGLAQ+IV +VPETL+++
Sbjct: 179 RLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDK 238
Query: 327 KLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDA 386
++++LDM ++VAGT YRG+FE RLK V+ E+ ++ G IILFIDELHT+IGAG GA+DA
Sbjct: 239 RVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA-GNIILFIDELHTLIGAGGAEGAIDA 297
Query: 387 SNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRE 446
SN+LKP L RGEL+CIGATTL+EYR YIEKD ALERRFQ + D+PS++ + IL+GLR+
Sbjct: 298 SNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRD 357
Query: 447 RYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEI 506
RYE HH V I RYIT+RFLPDKAIDL+DEAA+K+++ + P L E
Sbjct: 358 RYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKE- 416
Query: 507 DRAVLKLEMEKLSLKNDTDKASKE--RLSKLEHDLNSLKQKQKELNDQWSREK 557
L++++E++ + D S+E + + L L++K ++ QW ++
Sbjct: 417 ----LEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQ 465
Score = 86 (35.3 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 88 GVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQD 147
G +T +A + I ++D AR V TEH++ L+ + +G+A R+L G
Sbjct: 71 GTEASQTVHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVS 130
Query: 148 NTKVLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQ 186
K Q + +G G +N L S A+
Sbjct: 131 LNKARQQVLQLLGSNEASSGHQGGSSTNANTPTLDSLAR 169
>TIGR_CMR|BA_0080 [details] [associations]
symbol:BA_0080 "negative regulator of genetic competence
ClpC/MecB" species:198094 "Bacillus anthracis str. Ames"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009294 "DNA
mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 1001 (357.4 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 220/465 (47%), Positives = 314/465 (67%)
Query: 494 MEITSKPIELDE--IDRA--VLK-----LEME-KLSLKNDTDKASKERLSKLEHDLNSLK 543
+E +PI +DE +D + +LK E ++S+ +D A+ + + D L
Sbjct: 331 LERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITD-RFLP 389
Query: 544 QKQKELNDQWSREKDLMS-----RIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMI 598
K +L D+ + + L S ++ ++ +++ + E +AA + + +AA L+
Sbjct: 390 DKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQ- 448
Query: 599 SLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLE 658
L+ +LE+ ++ E Q +S EVT DIA +VS WT IP+S L Q+E +KL+ LE
Sbjct: 449 RLREKLEDTKRQWKEQQGKENS----EVTVEDIANVVSTWTRIPVSKLAQTETDKLLNLE 504
Query: 659 EVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF 718
+LH RVIGQD AV +VA A+RR+RAGL DP RPI SF+F+GPTGVGKTEL +ALA+ +F
Sbjct: 505 SILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMF 564
Query: 719 NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAH 778
E+A++RIDMSEYMEKHS SRLVG+PPGYVGYEEGGQLTE VRR+PYSVVL DE+EKAH
Sbjct: 565 GDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAH 624
Query: 779 QDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ---SVQDSKEAVY 835
DVFNILLQ+L+DGR+TDS+GRTV F N +VIMTSN+G+ + +VQD Y
Sbjct: 625 PDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRD-Y 683
Query: 836 EVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLH 895
MK +V++ ++ FRPEFLNRIDE IVF L+ K I +IV + +N++ +RLK+++I+LH
Sbjct: 684 SDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELH 743
Query: 896 YTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 940
T+ A++ + GFD +GARP++R IQ+ VE+ ++ +LKG I+
Sbjct: 744 LTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIE 788
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 203/473 (42%), Positives = 294/473 (62%)
Query: 97 FTEKAWEGI-VGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
FTE+A + + + +A R+ + + TEH++ L+ + +G+A + L G KV +
Sbjct: 6 FTERAQKVLALSQEEAIRIGHNNI-GTEHILLGLVREGEGIAAKALIALGLSPEKVQKEV 64
Query: 156 EDFISKQPKVTGATS-GPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--F 212
E I + + + P L + A+++ +V EH+LL + +
Sbjct: 65 EALIGRGTEASQTVHYTPRAKKVIELSMDEARKLGHS----YVGTEHILLGLIREGEGVA 120
Query: 213 GRLLFN-DIRLNEK-----DLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSG 266
R+L N + LN+ L + +A GHQ + N L+ DLT +AR
Sbjct: 121 ARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTN--ANTPTLDSLARDLTVVAREN 178
Query: 267 KLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNR 326
+LDPVIGR EI+R I++LSRRTKNNPV+IGEPGVGKTAIAEGLAQ+IV +VPETL+++
Sbjct: 179 RLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDK 238
Query: 327 KLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDA 386
++++LDM ++VAGT YRG+FE RLK V+ E+ ++ G IILFIDELHT+IGAG GA+DA
Sbjct: 239 RVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA-GNIILFIDELHTLIGAGGAEGAIDA 297
Query: 387 SNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRE 446
SN+LKP L RGEL+CIGATTL+EYR YIEKD ALERRFQ + D+PS++ + IL+GLR+
Sbjct: 298 SNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRD 357
Query: 447 RYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEI 506
RYE HH V I RYIT+RFLPDKAIDL+DEAA+K+++ + P L E
Sbjct: 358 RYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKE- 416
Query: 507 DRAVLKLEMEKLSLKNDTDKASKE--RLSKLEHDLNSLKQKQKELNDQWSREK 557
L++++E++ + D S+E + + L L++K ++ QW ++
Sbjct: 417 ----LEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQ 465
Score = 86 (35.3 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 88 GVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQD 147
G +T +A + I ++D AR V TEH++ L+ + +G+A R+L G
Sbjct: 71 GTEASQTVHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVS 130
Query: 148 NTKVLQATEDFISKQPKVTGATSGPIVGSNFGLLLSNAQ 186
K Q + +G G +N L S A+
Sbjct: 131 LNKARQQVLQLLGSNEASSGHQGGSSTNANTPTLDSLAR 169
>TIGR_CMR|DET_1413 [details] [associations]
symbol:DET_1413 "chaperone ClpB" species:243164
"Dehalococcoides ethenogenes 195" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0017111
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 RefSeq:YP_182121.1 ProteinModelPortal:Q3Z6M8 SMR:Q3Z6M8
STRING:Q3Z6M8 GeneID:3229274 KEGG:det:DET1413 PATRIC:21609853
OMA:EFSENAT ProtClustDB:CLSK935562
BioCyc:DETH243164:GJNF-1414-MONOMER Uniprot:Q3Z6M8
Length = 812
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 226/497 (45%), Positives = 326/497 (65%)
Query: 96 EFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
+FTE+A E + + + + EH++ AL+ Q+ GL IL + + ++ +
Sbjct: 5 KFTEQAQEALSASQMLVQEYQHSQWDVEHVLLALIRQEKGLVGEILKELKVSSEEITKQL 64
Query: 156 EDFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--FG 213
D + + PK G LL A + + D+F+ EHLL+A D +
Sbjct: 65 VDSLKRSPKAVGGNIQIYPTPRIINLLQTANNEAERLRDEFIGTEHLLVAIAGDTQGESA 124
Query: 214 RLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDPVIG 273
R+L ++++ + A++ +RG RVTD E KY+AL KY DLTELA+ GK+DPVIG
Sbjct: 125 RIL-KQFGIDQEKVYSALQKIRGGHRVTDARAESKYRALAKYSRDLTELAKQGKIDPVIG 183
Query: 274 RDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDM 333
RD EIRR +QILSRRTKNNPVI+GE GVGKTAIAEG+AQ+I DVPE+L++RK+++LDM
Sbjct: 184 RDQEIRRVMQILSRRTKNNPVIVGEAGVGKTAIAEGVAQKIADNDVPESLRDRKVMALDM 243
Query: 334 ASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPM 393
+LVAG+ +RG+FE+RLKAV+ EV +S G+IILFIDE+HT++GAG GA+DASNMLKP
Sbjct: 244 GALVAGSKFRGEFEERLKAVMDEVRQSAGEIILFIDEIHTVVGAGAAEGAIDASNMLKPA 303
Query: 394 LGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHG 453
L RGEL+ IGATTL++YR YIEKD ALERRFQ VF D+P+VE TI IL+G+R +YE HH
Sbjct: 304 LARGELQTIGATTLDDYRKYIEKDTALERRFQPVFVDEPTVEQTIEILKGIRPKYEAHHK 363
Query: 454 VKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLK- 512
+KI RYITER LPDKAIDL+DEAA+KL+++ S P E+ +++ + +
Sbjct: 364 LKITDAALEAAARLSSRYITERQLPDKAIDLIDEAASKLRLDSESAPPEVKKLEDELRQA 423
Query: 513 -LEMEKLSLKNDTDKASKERLSK--LEHDLNSLKQ---KQKELNDQWSREK--DLMSRIR 564
+E E S + +KA++ + K LE N+ ++ KQ+++ ++ + E+ L+S +
Sbjct: 424 GIEEEAASQLQEYEKAAELKAEKMRLEEKFNTAREDWLKQEKIAEEVTAEQITTLVSSMT 483
Query: 565 SIKEEIDRVNLEMEAAE 581
I + ++ LE EA++
Sbjct: 484 GIP--VSQM-LEGEASK 497
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 206/429 (48%), Positives = 284/429 (66%)
Query: 524 TDKA--SKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSR-----IRSIKEEIDRVNLE 576
TD A + RLS L K +L D+ + + L S ++ +++E+ + +E
Sbjct: 367 TDAALEAAARLSSRYITERQLPDKAIDLIDEAASKLRLDSESAPPEVKKLEDELRQAGIE 426
Query: 577 MEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVS 636
EAA + + +AAELK M L+ + A ++ + +K + EEVT I +VS
Sbjct: 427 EEAASQLQEYEKAAELKAEKM-RLEEKFNTAREDWLKQEK-----IAEEVTAEQITTLVS 480
Query: 637 KWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASF 696
TGIP+S + + E KL+ +E+ +H+R++ Q+ AVK+VA+AIRRSRAGL DP RPI SF
Sbjct: 481 SMTGIPVSQMLEGEASKLLNMEDRIHERMVDQEEAVKAVAEAIRRSRAGLKDPRRPIGSF 540
Query: 697 MFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQ 756
+F+GPTGVGKTEL ++LA FLF+ E A+VR+DMSEY EKH+VSRLVGAPPGYVGY+EGGQ
Sbjct: 541 LFLGPTGVGKTELARSLAWFLFDDETAMVRLDMSEYQEKHTVSRLVGAPPGYVGYDEGGQ 600
Query: 757 LTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIG 816
LTE+VRRRPY V+L DEIEKAH DV+N LLQLLDDGR+TD QGRTV F N V+IMTSN G
Sbjct: 601 LTELVRRRPYRVILLDEIEKAHPDVYNTLLQLLDDGRLTDGQGRTVDFKNTVIIMTSNAG 660
Query: 817 SHYI-----LETLQSVQDSKEAV--YEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDS 869
I L DSK YE MK +V+ ++TFRPEF+NR+DE IVF L
Sbjct: 661 IETIKRESALGFAVRTDDSKTRHDGYERMKDKVMAEVKKTFRPEFINRVDEIIVFHELAE 720
Query: 870 KEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENE 929
++I +IV+ + V RL+++K+ L T A L +G+DP FGARP++R I++ +E+
Sbjct: 721 EQIRQIVDFIIKDVSKRLEERKLKLELTDAAKGWLAKVGYDPAFGARPLRRAIERYIESP 780
Query: 930 IAVAILKGD 938
+A +L+ +
Sbjct: 781 LADKLLRNE 789
>UNIPROTKB|Q724I0 [details] [associations]
symbol:LMOf2365_0244 "ClpC ATPase" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0006950 "response to stress"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IMP]
InterPro:IPR001270 InterPro:IPR001943 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
PROSITE:PS50151 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0016887 EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0019538
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 OMA:QTIHYTP RefSeq:YP_012854.1 ProteinModelPortal:Q724I0
SMR:Q724I0 STRING:Q724I0 GeneID:2799882 KEGG:lmf:LMOf2365_0244
PATRIC:20321701 ProtClustDB:CLSK2753149 Uniprot:Q724I0
Length = 820
Score = 946 (338.1 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 191/381 (50%), Positives = 274/381 (71%)
Query: 563 IRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLL 622
++ ++ + + E +AA + + +AA L+ L++ LEE + N E Q HS +
Sbjct: 412 VKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQ-KLKKSLEETKANWQEKQGLDHSEV 470
Query: 623 REEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRS 682
EE+ +AE+V+ WTGIP++ L ++E KL+ +E++LH+RVIGQD AVK+V+ A+RR+
Sbjct: 471 TEEI----VAEVVASWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRA 526
Query: 683 RAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLV 742
RAGL DP RPI SF+F+GPTGVGKTEL +ALA+ +F E++++RIDMSEYMEK S +RLV
Sbjct: 527 RAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLV 586
Query: 743 GAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTV 802
GAPPGYVGYEEGGQLTE VR++PYSVVL DEIEKAH DVFN+LLQ+LDDGR+TDS+GR V
Sbjct: 587 GAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVV 646
Query: 803 SFTNCVVIMTSNIGSHYILETLQ---SVQDSKEAVYEVMKKQVVELARQTFRPEFLNRID 859
F N V+IMTSNIG+ + + +V D + ++ M+ +V++ +Q FRPEF+NRID
Sbjct: 647 DFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKD-HKAMEHRVLQDLKQAFRPEFINRID 705
Query: 860 EYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVK 919
E IVF L KE+ +IV + ++ RL ++ I + T+ A + + G+DP +GARP+K
Sbjct: 706 ETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLK 765
Query: 920 RVIQQLVENEIAVAILKGDIK 940
R IQ+ VE+ ++ +L+G+IK
Sbjct: 766 RAIQKEVEDMLSEELLRGNIK 786
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 214/518 (41%), Positives = 313/518 (60%)
Query: 97 FTEKAWEGI-VGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQAT 155
FT++A + + + +A R+N+ + TEH++ L+ + +G+A + L + G + KV Q
Sbjct: 6 FTQRAQKVLALSQEEAMRLNHSNL-GTEHILLGLVREGEGIAAKALYELGISSEKVQQEV 64
Query: 156 EDFISKQPK-VTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--F 212
E I K VT P L + A+++ +V EH+LL + +
Sbjct: 65 EGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHT----YVGTEHILLGLIREGEGVA 120
Query: 213 GRLLFN-DIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQA---LEKYGNDLTELARSGKL 268
R+L N I LN+ + V + G T + QA L+ DLT +AR L
Sbjct: 121 ARVLSNLGISLNKA--RQQVLQLLGGGDATGAGRQTNTQATPTLDSLARDLTVIAREDNL 178
Query: 269 DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKL 328
DPVIGR EI+R I++LSRRTKNNPV+IGEPGVGKTAIAEGLAQ+IVR +VPETL+ +++
Sbjct: 179 DPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRV 238
Query: 329 ISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASN 388
++LDM ++VAGT YRG+FE RLK V+ E+ ++ G +ILFIDELHT+IGAG GA+DASN
Sbjct: 239 MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA-GNVILFIDELHTLIGAGGAEGAIDASN 297
Query: 389 MLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERY 448
+LKP L RGEL+CIGATTL+EYR YIEKD ALERRFQ + D+P+VE +I IL GLR+RY
Sbjct: 298 ILKPPLARGELQCIGATTLDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRY 357
Query: 449 ELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDR 508
E HH V I RYI++RFLPDKAID++DE+ +K++++ + P + E++
Sbjct: 358 EAHHRVAITDEALEAAVRLSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMEN 417
Query: 509 AVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKE 568
+ L+ EK + + E+ + L LK+ +E W +EK + + E
Sbjct: 418 NLSDLKKEKDAAVQGQEF---EKAASLRDKEQKLKKSLEETKANW-QEKQGLDH-SEVTE 472
Query: 569 EIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
EI E+ A+ + + AE + ++++++ L E
Sbjct: 473 EIVA---EVVASWTGIPVAKLAETETNKLLNMEKLLHE 507
Score = 86 (35.3 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 88 GVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQD 147
G +T ++T +A + I ++D AR V TEH++ L+ + +G+A R+L+ G
Sbjct: 71 GEKAVTTIQYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGIS 130
Query: 148 NTKVLQ 153
K Q
Sbjct: 131 LNKARQ 136
>TAIR|locus:2099433 [details] [associations]
symbol:HSP93-III species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=ISS] [GO:0045037 "protein
import into chloroplast stroma" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0034214 "protein hexamerization"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
InterPro:IPR001270 InterPro:IPR001943 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
PROSITE:PS50151 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
GO:GO:0009570 EMBL:CP002686 GO:GO:0042803 GO:GO:0016020
GO:GO:0009941 GO:GO:0016887 GO:GO:0009658 GO:GO:0019538
EMBL:AL132963 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HSSP:P03815 KO:K03696 ProtClustDB:CLSN2689981 GO:GO:0045037
EMBL:AB022324 EMBL:AY056787 IPI:IPI00535199 PIR:T49283 PIR:T52456
RefSeq:NP_566912.2 UniGene:At.23421 ProteinModelPortal:Q9SXJ7
SMR:Q9SXJ7 IntAct:Q9SXJ7 STRING:Q9SXJ7 PRIDE:Q9SXJ7
EnsemblPlants:AT3G48870.1 GeneID:824048 KEGG:ath:AT3G48870
GeneFarm:2764 TAIR:At3g48870 InParanoid:Q9SXJ7 OMA:QTIHYTP
PhylomeDB:Q9SXJ7 Genevestigator:Q9SXJ7 GO:GO:0034214 Uniprot:Q9SXJ7
Length = 952
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 208/481 (43%), Positives = 307/481 (63%)
Query: 472 ITERFLPDKAID-LVDEAAAKL-----KMEITSKPIELDEIDRAVLKLEMEKLSLKNDTD 525
+ RF P K + V+EA L + EI K DE A +L + +S + D
Sbjct: 445 LERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPD 504
Query: 526 KASKERLSKLEHDLNSLKQKQKELNDQWSR-EKDLMSRIRSIKEEIDRVNLEMEAAERDY 584
KA + ++ + ++ + +L ++ EK L + E + + EM + RD
Sbjct: 505 KA----IDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFEMAGSHRDR 560
Query: 585 DLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLS 644
++ AE+ ++S +++ +AE +E ++ G + VT+ DI IV+ WTGIP+
Sbjct: 561 EIELKAEI--ANVLSRGKEVAKAE---NEAEEGGPT-----VTESDIQHIVATWTGIPVE 610
Query: 645 SLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGV 704
+ E +L+ +E+ LH RVIGQD AVK+++ AIRR+R GL +P RPIASF+F GPTGV
Sbjct: 611 KVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 670
Query: 705 GKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRR 764
GK+EL KALA + F +E A++R+DMSE+ME+H+VS+L+G+PPGYVGY EGGQLTE VRRR
Sbjct: 671 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 730
Query: 765 PYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETL 824
PY++VLFDEIEKAH DVFN++LQ+L+DGR+TDS+GRTV F N ++IMTSN+GS I +
Sbjct: 731 PYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 790
Query: 825 QSV-----QDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQ 879
+ + D K++ Y +K V E +Q FRPEFLNR+DE IVF+ L E+ +I +I
Sbjct: 791 RRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 850
Query: 880 MNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
+ V RL+ K+I+L T+ + GFDP++GARP++R I +L+E+ +A +L DI
Sbjct: 851 LKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSRDI 910
Query: 940 K 940
K
Sbjct: 911 K 911
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 195/465 (41%), Positives = 291/465 (62%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATE 156
FTEKA + I+ + + AR V TE ++ L+ + G+A ++L G + E
Sbjct: 118 FTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVE 177
Query: 157 DFISKQPKVTGATSGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR--FGR 214
I + A P +L + + + ++ +++ EHLLL L + R
Sbjct: 178 KIIGRGSGFV-AVEIPFTPRAKRVLELSLEEAR-QLGHNYIGSEHLLLGLLREGEGVAAR 235
Query: 215 LLFNDIRLNEKDLK-DAVKAVRGHQRVT-----DQNPEGKYQALEKYGNDLTELARSGKL 268
+L N + + +++ ++ V + VT + K LE+YG +LT+LA GKL
Sbjct: 236 VLEN-LGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKL 294
Query: 269 DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKL 328
DPV+GR +I R +QIL+RRTKNNP +IGEPGVGKTAIAEGLAQRI GDVPET++ + +
Sbjct: 295 DPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTV 354
Query: 329 ISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASN 388
I+LDM LVAGT YRG+FE+RLK +++E+ +S+ +IILFIDE+HT+IGAG GA+DA+N
Sbjct: 355 ITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSD-EIILFIDEVHTLIGAGAAEGAIDAAN 413
Query: 389 MLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERY 448
+LKP L RGEL+CIGATT++EYR +IEKDPALERRFQ V +P+VE I IL+GLRERY
Sbjct: 414 ILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERY 473
Query: 449 ELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELDEIDR 508
E+HH ++ +YI++RFLPDKAIDL+DEA +++++ P E E+++
Sbjct: 474 EIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK 533
Query: 509 AVLKLEMEKLSL--KNDTDKAS--KERLSKLEHDLNSLKQKQKEL 549
+ ++ EK D + A ++R +L+ ++ ++ + KE+
Sbjct: 534 QLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEV 578
>TIGR_CMR|ECH_0567 [details] [associations]
symbol:ECH_0567 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006508 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086
TIGRFAMs:TIGR02639 RefSeq:YP_507379.1 ProteinModelPortal:Q2GGQ4
STRING:Q2GGQ4 GeneID:3927917 KEGG:ech:ECH_0567 PATRIC:20576600
OMA:LANHMGM ProtClustDB:CLSK749445
BioCyc:ECHA205920:GJNR-569-MONOMER Uniprot:Q2GGQ4
Length = 765
Score = 661 (237.7 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 139/292 (47%), Positives = 192/292 (65%)
Query: 250 QALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEG 309
+ L+ Y +L E A+ GK+D VIGR E+ R +++L RR KNNP+ +G+PGVGKTAI EG
Sbjct: 181 ETLDSYCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAIVEG 240
Query: 310 LAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEV-TKSNGQIILFI 368
LA +I+ GDVP+ L+ + SLDM +L+AGT YRGDFE+R+K+V+K + K N ILFI
Sbjct: 241 LALKIIEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKENA--ILFI 298
Query: 369 DELHTIIGAGNQSG-AMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQV 427
DE+HTI+GAG+ SG ++DASN+LKP L RG LRCIGATT EY N EKD AL RR+Q++
Sbjct: 299 DEIHTIVGAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQKI 358
Query: 428 FCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDE 487
++ SV T+ IL G++ YE HH V+ RYI+ + LPDKA+D++DE
Sbjct: 359 NVEESSVGETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVIDE 418
Query: 488 AAAKLKMEIT-SKPIELDEIDRAVLKLEMEKLS--LKNDTDKAS--KERLSK 534
A K+ T +K I +I+ + ++ S L ND D+ +E L K
Sbjct: 419 AGVYCKLHNTGNKVITGSDIEHIISRITEIPCSNLLFNDLDRVKNLEENLKK 470
Score = 614 (221.2 bits), Expect = 9.3e-64, Sum P(2) = 9.3e-64
Identities = 139/409 (33%), Positives = 240/409 (58%)
Query: 547 KELNDQWSREKDLMSRIRSIKEEIDRVN--LE-MEAAERDYDLNRAAE-----LKYGTMI 598
KE N+ + +++ L R + I E V L ++ + Y+ + +KY +
Sbjct: 339 KEYNNNFEKDRALARRYQKINVEESSVGETLRILDGIKSYYESHHQVRYTNQAIKYAAEL 398
Query: 599 SLQRQLEEA---EKNLSEFQKSG-----HSLLREEVTDLDIAEIVSKWTGIPLSSLQQSE 650
S R + +K + ++G H+ + +T DI I+S+ T IP S+L ++
Sbjct: 399 S-DRYISGKMLPDKAVDVIDEAGVYCKLHNTGNKVITGSDIEHIISRITEIPCSNLLFND 457
Query: 651 REKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELG 710
+++ LEE L K + GQD A+ + D+I+ ++AGL + +P+AS++F GPTGVGKTEL
Sbjct: 458 LDRVKNLEENLKKDIFGQDFAISHLVDSIKIAKAGLRNYNKPLASYLFSGPTGVGKTELA 517
Query: 711 KALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVL 770
+ LA+ + L+R DMSEYME H++S+++G+PPGYVGY++GG LT+ + R YSV+L
Sbjct: 518 RQLANHM---GMKLIRFDMSEYMESHAISKIIGSPPGYVGYDQGGLLTDSISRHQYSVLL 574
Query: 771 FDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDS 830
DEIEKAH D++NILLQ++D G +TD+ G+ V+F N V+I+T+N G+ + ++ +
Sbjct: 575 LDEIEKAHSDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTTNAGAFELSKSSIGFIRN 634
Query: 831 KEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQK 890
K + +K + + F PEF NR+D I F LD + + +IV+ + ++K++L +K
Sbjct: 635 KSFTHGDNEKAIERI----FSPEFRNRLDAIISFSSLDQEVMLRIVKKFIYQLKEQLAKK 690
Query: 891 KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
+ + + + L G++ +G R ++ +I + V+ +A IL G +
Sbjct: 691 NVHIDVADDVLMYLAQSGYNDAYGVRNIENIISKKVKKYLAEEILFGKL 739
Score = 65 (27.9 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 173 IVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLK 228
++ N L A I + ++ ++EHLLLA L+DD R +F R++ LK
Sbjct: 7 VLSKNLEASLHKALSIAFDFHHEYATLEHLLLA-LTDDIDARRVFYAFRVSIDKLK 61
>TIGR_CMR|APH_0450 [details] [associations]
symbol:APH_0450 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0042623 "ATPase
activity, coupled" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF07724
PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871 SMART:SM00382
GO:GO:0005524 GO:GO:0006508 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086 OMA:DYGCITD
ProtClustDB:CLSK749445 RefSeq:YP_505053.1 ProteinModelPortal:Q2GKP8
SMR:Q2GKP8 STRING:Q2GKP8 GeneID:3930415 KEGG:aph:APH_0450
PATRIC:20949522 BioCyc:APHA212042:GHPM-477-MONOMER Uniprot:Q2GKP8
Length = 773
Score = 634 (228.2 bits), Expect = 2.8e-64, Sum P(2) = 2.8e-64
Identities = 140/302 (46%), Positives = 195/302 (64%)
Query: 251 ALEKYGNDLTELARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGL 310
+LE Y +L +LAR GK+D VIGR E R I++L RR KNNP+ +G+ GVGKTAI EGL
Sbjct: 182 SLEAYCVNLNDLAREGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEGL 241
Query: 311 AQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEV-TKSNGQIILFID 369
RIV G++ L+ ++ SLDM SL+AGT YRGDFE+R+KAV++ + K N +LFID
Sbjct: 242 VLRIVEGNIVSQLRCVEVYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKKNA--VLFID 299
Query: 370 ELHTIIGAGNQSGA-MDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVF 428
E+HTIIGAG+ SG+ +DASN+LKP L RG +RCIGATT EY + EKD AL RR+Q++
Sbjct: 300 EIHTIIGAGSTSGSPLDASNLLKPALARGTIRCIGATTHKEYNSNFEKDRALARRYQKIN 359
Query: 429 CDQPSVENTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEA 488
++ +VE T+ IL G++ YE++H V+ RYI+ER LPDKA+D++DEA
Sbjct: 360 VEESTVEETVQILSGIKSYYEVYHDVRYTNQAIRYAAELSDRYISERMLPDKAVDVLDEA 419
Query: 489 A--AKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQ 546
+KL+ +S+ + +I + K+ S +D K R LE +L + Q
Sbjct: 420 GVYSKLRSPESSRIVTGKDIGAIISKITEVPCSDLLASDDIRKVR--DLEDNLKKVIFGQ 477
Query: 547 KE 548
E
Sbjct: 478 DE 479
Score = 625 (225.1 bits), Expect = 3.1e-63, Sum P(2) = 3.1e-63
Identities = 172/515 (33%), Positives = 282/515 (54%)
Query: 436 NTISILRGLRERYELHHGVKIXXXXXXXXXXXXXRYITERFLPDK--AIDLVDEAAAKLK 493
N +S LR + E Y L G + + + R + +K A+ +DE +
Sbjct: 249 NIVSQLRCV-EVYSLDMGSLLAGTRYRGDFEERIKAVI-RAIENKKNAVLFIDEIHTIIG 306
Query: 494 MEITS-KPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKELNDQ 552
TS P++ + LK + + +++ KE S E D +L ++ +++N +
Sbjct: 307 AGSTSGSPLDASNL----LKPALARGTIRCIGATTHKEYNSNFEKD-RALARRYQKINVE 361
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLS 612
S ++ + + IK + + + + + AAEL IS +R L + K +
Sbjct: 362 ESTVEETVQILSGIKSYYEVYH---DVRYTNQAIRYAAELS-DRYIS-ERMLPD--KAVD 414
Query: 613 EFQKSG-HSLLREE-----VTDLDIAEIVSKWTGIPLSSLQQSEREKLVM-LEEVLHKRV 665
++G +S LR VT DI I+SK T +P S L S+ + V LE+ L K +
Sbjct: 415 VLDEAGVYSKLRSPESSRIVTGKDIGAIISKITEVPCSDLLASDDIRKVRDLEDNLKKVI 474
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
GQD A+ V DAIR ++AG+ +P+A ++F GPTGVGKTEL + A + L+
Sbjct: 475 FGQDEAITHVVDAIRIAKAGMRSSQKPLACYLFAGPTGVGKTELVRQFAKCM---GMKLI 531
Query: 726 RIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNIL 785
R DMSEY+E H+VSR++G+PPGYVGYE+GG LT+ + R YSV+L DEIEKAH ++NIL
Sbjct: 532 RFDMSEYVESHTVSRMIGSPPGYVGYEQGGLLTDAISRNQYSVLLLDEIEKAHSSLYNIL 591
Query: 786 LQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILET-LQSVQDSKEAVYEVMKKQVVE 844
LQ++D G ITD+ G+ VSF N V+I+T+N G+ + + +DS + K V+E
Sbjct: 592 LQIMDYGYITDTYGKKVSFRNVVIILTTNAGAMELSRNPIGFNRDSNVRIDNARK--VIE 649
Query: 845 LARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLL 904
+ F PEF NR+D + F LDS I+++VE +N ++++L K + + +E+++ L
Sbjct: 650 ---KIFGPEFCNRLDAIVPFAYLDSCVIAQVVEKFINELREQLAHKDVSIDIDQESLSYL 706
Query: 905 GILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 939
LG ++G R ++ ++ Q ++ ++A +L G +
Sbjct: 707 AKLGQREDYGVRKIQGIVAQKLKKQLAFEMLFGKL 741
Score = 48 (22.0 bits), Expect = 2.8e-64, Sum P(2) = 2.8e-64
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 173 IVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLF 217
++ N L A I + + ++EHLLLA D R+L+
Sbjct: 1 MLSKNLEASLHRAISIAFDFRHECATLEHLLLALTDDVDVRRVLY 45
>TIGR_CMR|NSE_0313 [details] [associations]
symbol:NSE_0313 "ATP-dependent Clp protease, ATP-binding
subunit ClpA" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR013461 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 SMART:SM00382
GO:GO:0005524 GO:GO:0006508 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 KO:K03694 GO:GO:0004176 InterPro:IPR019489
PANTHER:PTHR11638:SF14 Pfam:PF10431 SMART:SM01086
RefSeq:YP_506203.1 ProteinModelPortal:Q2GE93 SMR:Q2GE93
STRING:Q2GE93 GeneID:3932210 KEGG:nse:NSE_0313 PATRIC:22680717
OMA:DYGCITD ProtClustDB:CLSK2527934
BioCyc:NSEN222891:GHFU-339-MONOMER Uniprot:Q2GE93
Length = 740
Score = 640 (230.4 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 172/464 (37%), Positives = 252/464 (54%)
Query: 108 AVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTG 167
A+ AR + V EHL+ AL + ++ RI + + K+ + F+S K
Sbjct: 13 ALVLARSFSHSYVTLEHLLLALTDDEE--VSRIAFNSSMNFAKLRDSLIHFLSTA-KFFA 69
Query: 168 ATSGPIVGSN-----FGLL-LSNAQRIKKEM-EDDFVSVEHLLLA-FLSDDR--FGRLLF 217
S V + GL + +I + E ++ H+L+ F D F L
Sbjct: 70 RLSNECVDISKIKPTLGLRRVIQRSKIHANIAEFGQITGLHVLIELFCEQDSYAFSFLTE 129
Query: 218 NDIRLNEKDLKDAVKAVRGHQRV------TDQNPEGKYQALEKYGNDLTELARSGKLDPV 271
++I L E + +K+ +G TD + L++Y D+ ELA G++D +
Sbjct: 130 SNITLTEL-MSHVMKSRKGSPTGGTSTANTDALRSAELDNLKEYCTDMNELAIQGRIDKL 188
Query: 272 IGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISL 331
I R EI R I+IL RRTKNNP+ +GEPGVGKTAI EGL IV G+VP+ L+N ++ +L
Sbjct: 189 IDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLVHAIVSGNVPQKLRNTRVYAL 248
Query: 332 DMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQS-GAMDASNML 390
+ SL+AGT YRGDFE+R++ V+ E++ S I LFIDE+HTI+GAG+ S G++DA N+L
Sbjct: 249 KIGSLLAGTRYRGDFEERIRTVMNEISSSKNTI-LFIDEIHTIVGAGSTSNGSIDAGNLL 307
Query: 391 KPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYEL 450
KP L +G LRCIGATT EY + EKD AL+RRFQ++ ++PS+ +T++I+ G + YE
Sbjct: 308 KPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNIIDGTKSYYED 367
Query: 451 HHGVKIXXXXXXXXXXXXXRYITERFLPDKAIDLVDEAAAKLKMEITSKPIELD-EIDRA 509
H V RYI R PDKAIDL+D+ A E+ D +ID
Sbjct: 368 FHRVHYTKASLNEIVNLAHRYIPNRAFPDKAIDLMDDLGASYNAELFDIKKRRDRKID-- 425
Query: 510 VLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQK-ELNDQ 552
+K E L+ + + A +E L SL++ K E+ DQ
Sbjct: 426 -IKYVRETLAKRFNIPLAQLNYT--VEEVLTSLERNLKAEIFDQ 466
Score = 516 (186.7 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 146/416 (35%), Positives = 212/416 (50%)
Query: 523 DTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
+ D A R ++E + S+ ++ S +D R+ K ++ + + A R
Sbjct: 332 EKDAALDRRFQRIEIEEPSISDTLNIIDGTKSYYEDF-HRVHYTKASLNEI---VNLAHR 387
Query: 583 DYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLD-IAEIVSKWTGI 641
Y NRA K I L L A N F R+ D+ + E ++K I
Sbjct: 388 -YIPNRAFPDK---AIDLMDDLG-ASYNAELFDIKKR---RDRKIDIKYVRETLAKRFNI 439
Query: 642 PLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGP 701
PL+ L + E L LE L + QD ++ V ++R GL +P+AS++F G
Sbjct: 440 PLAQLNYTVEEVLTSLERNLKAEIFDQDNIIEQVIYSLRPGLLGLKGE-KPLASYLFGGS 498
Query: 702 TGVGKTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVV 761
TGVGKTEL K +A N VRIDMSEYME H+VSRL+GAPPGYVG+++G + E++
Sbjct: 499 TGVGKTELAKQIAK---NLCMRFVRIDMSEYMEGHAVSRLIGAPPGYVGHDKGSFIAEIL 555
Query: 762 RRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYIL 821
++ S++LFDEIEKAH D NILLQ+LD G ITDS G+ F NC++ T+N+GS +I
Sbjct: 556 FKQGSSLILFDEIEKAHADFQNILLQILDYGCITDSTGKKSRFKNCIMACTTNVGSTFIE 615
Query: 822 E-TLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQM 880
+L QD K+ K Q F E L+R D IVF LD + KI+
Sbjct: 616 NNSLGFTQDGKKTD---KKAQFASF----FNKELLDRFDLAIVFNTLDKNSVEKIINKSA 668
Query: 881 NRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILK 936
++ L++K I L T E V LL AR ++R I+ + ++ +L+
Sbjct: 669 TEIRALLEEKGIKLKLTDEVVKLLVARHSSGKISARTIERTIRNDIMQAVSDRMLR 724
Score = 80 (33.2 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 182 LSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAV 231
L NA + + +V++EHLLLA D+ R+ FN +N L+D++
Sbjct: 10 LQNALVLARSFSHSYVTLEHLLLALTDDEEVSRIAFNS-SMNFAKLRDSL 58
>UNIPROTKB|I3LJ13 [details] [associations]
symbol:LOC100524385 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR013093
Pfam:PF07724 PRINTS:PR00300 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
GeneTree:ENSGT00390000012961 EMBL:FP090889
Ensembl:ENSSSCT00000031156 OMA:PEDSAYS Uniprot:I3LJ13
Length = 410
Score = 441 (160.3 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 84/199 (42%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 32 REAEERRRFPLEQRLKEHIIGQESAIAAVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 90
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P
Sbjct: 91 TELAKQTARYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCP 150
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 151 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 208
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 209 ALQLRQEAL-EMSRNRIAE 226
Score = 134 (52.2 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 37/118 (31%), Positives = 65/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 224 IAENLGDVQSGDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 283
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 284 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 340
Score = 45 (20.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 29/103 (28%), Positives = 45/103 (43%)
Query: 246 EGKYQALEKYGNDLTELARSGKLDP-----VIGRDDEIRRCIQILSRRTKN------NPV 294
E KYQ EK E R L+ +IG++ I + RR +N +P+
Sbjct: 22 EAKYQ--EKQRKREAEERRRFPLEQRLKEHIIGQESAIA-AVGAAIRRKENGWYDEEHPL 78
Query: 295 I---IGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMA 334
+ +G G+GKT +A+ A R + D + I LDM+
Sbjct: 79 VFLFLGSSGIGKTELAKQTA-RYMHKDA-----KKGFIRLDMS 115
Score = 37 (18.1 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 8 YAREGEVMKLLRTSEAKYQEKQRKREAEER 37
>UNIPROTKB|B4DXW4 [details] [associations]
symbol:CLPB "cDNA FLJ53238, highly similar to Caseinolytic
peptidase B protein" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS50088 SMART:SM00248 SMART:SM00382 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 HOGENOM:HOG000006543 HOVERGEN:HBG025978 EMBL:AP000593
EMBL:AP002892 EMBL:AP003785 UniGene:Hs.523877 HGNC:HGNC:30664
EMBL:AK302158 IPI:IPI01012708 SMR:B4DXW4 STRING:B4DXW4
Ensembl:ENST00000543042 UCSC:uc010rqz.2 Uniprot:B4DXW4
Length = 506
Score = 444 (161.4 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 109/302 (36%), Positives = 177/302 (58%)
Query: 558 DLMSRIRSIKEE-IDRVNLEMEAAERDYD--LNRAAELKYGTMISLQRQLEEAEKNLSEF 614
D S ++ KE+ I + + + E D++ LN A K T + L + + + E
Sbjct: 27 DFSSVYKTAKEQGIHSLEV-LITREDDFNNRLNNRASFKGCTALHYA-VLADDYRTVKEL 84
Query: 615 QKSG-HSLLREEV--TDLDIAEI--VSKWTGIPLSSLQQSEREKLVM------LEEVLHK 663
G + L R E+ T LD A V K + Q+ +R++ LE+ L +
Sbjct: 85 LDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKE 144
Query: 664 RVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF-NTEN 722
+IGQ+ A+ +V AIRR G D P+ F+F+G +G+GKTEL K A ++ + +
Sbjct: 145 HIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKK 203
Query: 723 ALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVF 782
+R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P +VVLFDE++KAH DV
Sbjct: 204 GFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVL 263
Query: 783 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQV 842
I+LQL D+GR+TD +G+T+ + + IMTSN+ S I + ++Q +EA+ E+ + ++
Sbjct: 264 TIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--HALQLRQEAL-EMSRNRI 320
Query: 843 VE 844
E
Sbjct: 321 AE 322
Score = 135 (52.6 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 320 IAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 379
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 380 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 436
Score = 44 (20.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 218 NDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP-----VI 272
N ++ NE A G + E KYQ EK E R L+ +I
Sbjct: 90 NPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQ--EKQRKREAEERRRFPLEQRLKEHII 147
Query: 273 GRDDEIRRCIQILSRRTKN------NPVI---IGEPGVGKTAIAEGLAQ 312
G++ I + RR +N +P++ +G G+GKT +A+ A+
Sbjct: 148 GQESAIAT-VGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 195
Score = 37 (18.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 104 YAREGEVMKLLRTSEAKYQEKQRKREAEER 133
>UNIPROTKB|F1M955 [details] [associations]
symbol:Clpb "Caseinolytic peptidase B protein homolog"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0034605
"cellular response to heat" evidence=IEA] InterPro:IPR002110
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR013093
Pfam:PF00023 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 RGD:621328 GO:GO:0005739 GO:GO:0005524
GO:GO:0034605 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 GeneTree:ENSGT00390000012961
IPI:IPI00203340 PRIDE:F1M955 Ensembl:ENSRNOT00000026665
ArrayExpress:F1M955 Uniprot:F1M955
Length = 543
Score = 441 (160.3 bits), Expect = 5.4e-52, Sum P(2) = 5.4e-52
Identities = 83/199 (41%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 165 REAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 223
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGY+G+EEGGQLT+ +++ P
Sbjct: 224 TELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCP 283
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 284 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 341
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 342 ALQLRQEAL-EMSRNRIAE 359
Score = 135 (52.6 bits), Expect = 5.4e-52, Sum P(2) = 5.4e-52
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 357 IAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 416
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 417 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 473
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 294 VIIGEPGVGKTAIAEGLAQ 312
+ +G G+GKT +A+ A+
Sbjct: 214 LFLGSSGIGKTELAKQTAK 232
>MGI|MGI:1100517 [details] [associations]
symbol:Clpb "ClpB caseinolytic peptidase B" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=ISO]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF00023 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS50088 SMART:SM00248 SMART:SM00382 MGI:MGI:1100517
GO:GO:0005739 GO:GO:0005524 GO:GO:0034605 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03695 CTD:81570 GeneTree:ENSGT00390000012961
HOGENOM:HOG000006543 HOVERGEN:HBG025978 OrthoDB:EOG4KKZ2V
EMBL:U09874 EMBL:BC048175 IPI:IPI00467840 PIR:I49045
RefSeq:NP_033217.1 UniGene:Mm.3990 ProteinModelPortal:Q60649
SMR:Q60649 STRING:Q60649 REPRODUCTION-2DPAGE:Q60649 PaxDb:Q60649
PRIDE:Q60649 Ensembl:ENSMUST00000001884 GeneID:20480 KEGG:mmu:20480
NextBio:298609 Bgee:Q60649 CleanEx:MM_CLPB Genevestigator:Q60649
GermOnline:ENSMUSG00000001829 Uniprot:Q60649
Length = 677
Score = 443 (161.0 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 90/249 (36%), Positives = 160/249 (64%)
Query: 599 SLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIV--SKWTGIPLSSLQQSEREKLVM 656
S+ ++L + N + + GH+ L + + ++ +++ S+ + +++E +
Sbjct: 250 SIVKELLDRGANPLQRNEMGHTPL-DYAREGEVMKLLKTSETKYMEKQRKREAEERRRFP 308
Query: 657 LEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF 716
LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GKTEL K A +
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKY 367
Query: 717 LF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIE 775
+ + + +R+DMSE+ E+H V++ +G+PPGY+G+EEGGQLT+ +++ P +VVLFDE++
Sbjct: 368 MHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVD 427
Query: 776 KAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVY 835
KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I + ++Q +EA+
Sbjct: 428 KAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--HALQLRQEAL- 484
Query: 836 EVMKKQVVE 844
E+ + ++ E
Sbjct: 485 EMSRNRIAE 493
Score = 135 (52.6 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 491 IAENLGDVQMSDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 550
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 551 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 607
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 294 VIIGEPGVGKTAIAEGLAQ 312
+ +G G+GKT +A+ A+
Sbjct: 348 LFLGSSGIGKTELAKQTAK 366
>UNIPROTKB|E2R362 [details] [associations]
symbol:CLPB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
ProteinModelPortal:E2R362 Ensembl:ENSCAFT00000009224 Uniprot:E2R362
Length = 677
Score = 441 (160.3 bits), Expect = 2.5e-48, Sum P(2) = 2.5e-48
Identities = 107/291 (36%), Positives = 170/291 (58%)
Query: 558 DLMSRIRSIKEE-IDRVNLEMEAAERDYD--LNRAAELKYGTMISLQRQLEEAEKNLSEF 614
D S ++ KE+ I + + + E D++ LN A K T + L + + + E
Sbjct: 198 DFSSVYKTAKEQGIHSLEV-LVTREDDFNNRLNNRASFKGCTALHYA-VLADDYRTVKEL 255
Query: 615 QKSG-HSLLREEV--TDLDIAEI--VSKWTGIPLSSLQQSEREKLVM------LEEVLHK 663
G + L R E+ T LD A V K + Q+ +R++ LE+ L +
Sbjct: 256 LDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKE 315
Query: 664 RVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF-NTEN 722
+IGQ+ A+ +V AIRR G D P+ F+F+G +G+GKTEL K A ++ + +
Sbjct: 316 HIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKK 374
Query: 723 ALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVF 782
+R+DMSE+ E+H V++ +G+PPGY+G+EEGGQLT+ +++ P +VVLFDE++KAH DV
Sbjct: 375 GFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVL 434
Query: 783 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILE-TLQSVQDSKE 832
I+LQL D+GR+TD +G+T+ + + IMTSN+ S I + LQ Q++ E
Sbjct: 435 TIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALE 485
Score = 136 (52.9 bits), Expect = 2.5e-48, Sum P(2) = 2.5e-48
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 817 SHY-ILETLQSVQ-DSKEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEI 872
SH I E L VQ + K + + K+ V+ + + FR EFL RI+E + F P E+
Sbjct: 487 SHNRIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSEL 546
Query: 873 SKIVEIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIA 931
++V ++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A
Sbjct: 547 IQLVNKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLA 605
Query: 932 VA 933
A
Sbjct: 606 AA 607
Score = 53 (23.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 59/227 (25%), Positives = 90/227 (39%)
Query: 110 DAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFIS--KQPKVTG 167
+ A VN + + LM A + + D + R IL AG D +DF S K K G
Sbjct: 156 EGADVNARHRLGWTALMVAAISRNDSVVR-ILLAAGADPN----LGDDFSSVYKTAKEQG 210
Query: 168 ATSGPIVGS---NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD-RFGRLLF----ND 219
S ++ + +F L+N K L A L+DD R + L N
Sbjct: 211 IHSLEVLVTREDDFNNRLNNRASFK--------GCTALHYAVLADDYRTVKELLDGGANP 262
Query: 220 IRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP-----VIGR 274
++ NE A G + E KYQ EK E R L+ +IG+
Sbjct: 263 LQRNEMGHTPLDYAREGEVMKLLRTSEAKYQ--EKQRKREAEERRRFPLEQRLKEHIIGQ 320
Query: 275 DDEIRRCIQILSRRTKN------NPVI---IGEPGVGKTAIAEGLAQ 312
+ I + RR +N +P++ +G G+GKT +A+ A+
Sbjct: 321 ESAIAT-VGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 366
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 275 YAREGEVMKLLRTSEAKYQEKQRKREAEER 304
>UNIPROTKB|Q5E9N5 [details] [associations]
symbol:CLPB "Caseinolytic peptidase B protein homolog"
species:9913 "Bos taurus" [GO:0034605 "cellular response to heat"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS50088 SMART:SM00248 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0034605 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0017111
eggNOG:COG0542 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03695 EMBL:BT020885 EMBL:BC103469 IPI:IPI00698612
RefSeq:NP_001015625.1 UniGene:Bt.49163 HSSP:P43773
ProteinModelPortal:Q5E9N5 STRING:Q5E9N5 PRIDE:Q5E9N5
Ensembl:ENSBTAT00000001687 GeneID:520639 KEGG:bta:520639 CTD:81570
GeneTree:ENSGT00390000012961 HOGENOM:HOG000006543
HOVERGEN:HBG025978 InParanoid:Q5E9N5 OMA:TRKLDIR OrthoDB:EOG4KKZ2V
NextBio:20873146 Uniprot:Q5E9N5
Length = 677
Score = 441 (160.3 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 83/199 (41%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 299 REAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 357
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGY+G+EEGGQLT+ +++ P
Sbjct: 358 TELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCP 417
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 418 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 475
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 476 ALQLRQEAL-EMSRNRIAE 493
Score = 136 (52.9 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 491 IAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 550
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 551 NKELNFWAKRAKQRHNITLLWDREVADVL-VEGYNVHYGARSIKHEVERRVVNQLAAA 607
Score = 45 (20.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 57/227 (25%), Positives = 90/227 (39%)
Query: 110 DAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFIS--KQPKVTG 167
+ A VN + + LM A + + D + + +L AG D +DF S K K G
Sbjct: 156 EGADVNARHRLGWTALMVAAINRNDSVVQ-VLLAAGADPN----LGDDFSSVYKTAKDQG 210
Query: 168 ATSGPIVGS---NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD-RFGRLLF----ND 219
S ++ + +F L+N K L A L+DD R + L N
Sbjct: 211 IHSLEVLVTREDDFNNRLNNRASFK--------GCTALHYAVLADDYRTVKELLDGGANP 262
Query: 220 IRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP-----VIGR 274
++ NE A G + E KYQ EK E R L+ +IG+
Sbjct: 263 LQRNEMGHTPLDYAREGEVMKLLRTSETKYQ--EKQRKREAEERRRFPLEQRLKEHIIGQ 320
Query: 275 DDEIRRCIQILSRRTKN------NPVI---IGEPGVGKTAIAEGLAQ 312
+ I + RR +N +P++ +G G+GKT +A+ A+
Sbjct: 321 ESAIAT-VGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 366
Score = 37 (18.1 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 275 YAREGEVMKLLRTSETKYQEKQRKREAEER 304
>UNIPROTKB|F6XXW3 [details] [associations]
symbol:CLPB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
GeneTree:ENSGT00390000012961 OMA:TRKLDIR EMBL:AAEX03012825
EMBL:AAEX03012823 Ensembl:ENSCAFT00000009224 EMBL:AAEX03012824
Uniprot:F6XXW3
Length = 704
Score = 441 (160.3 bits), Expect = 4.4e-48, Sum P(2) = 4.4e-48
Identities = 107/291 (36%), Positives = 170/291 (58%)
Query: 558 DLMSRIRSIKEE-IDRVNLEMEAAERDYD--LNRAAELKYGTMISLQRQLEEAEKNLSEF 614
D S ++ KE+ I + + + E D++ LN A K T + L + + + E
Sbjct: 204 DFSSVYKTAKEQGIHSLEV-LVTREDDFNNRLNNRASFKGCTALHYA-VLADDYRTVKEL 261
Query: 615 QKSG-HSLLREEV--TDLDIAEI--VSKWTGIPLSSLQQSEREKLVM------LEEVLHK 663
G + L R E+ T LD A V K + Q+ +R++ LE+ L +
Sbjct: 262 LDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKE 321
Query: 664 RVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF-NTEN 722
+IGQ+ A+ +V AIRR G D P+ F+F+G +G+GKTEL K A ++ + +
Sbjct: 322 HIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKK 380
Query: 723 ALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVF 782
+R+DMSE+ E+H V++ +G+PPGY+G+EEGGQLT+ +++ P +VVLFDE++KAH DV
Sbjct: 381 GFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVL 440
Query: 783 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILE-TLQSVQDSKE 832
I+LQL D+GR+TD +G+T+ + + IMTSN+ S I + LQ Q++ E
Sbjct: 441 TIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALE 491
Score = 136 (52.9 bits), Expect = 4.4e-48, Sum P(2) = 4.4e-48
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 817 SHY-ILETLQSVQ-DSKEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEI 872
SH I E L VQ + K + + K+ V+ + + FR EFL RI+E + F P E+
Sbjct: 493 SHNRIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSEL 552
Query: 873 SKIVEIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIA 931
++V ++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A
Sbjct: 553 IQLVNKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLA 611
Query: 932 VA 933
A
Sbjct: 612 AA 613
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 59/227 (25%), Positives = 90/227 (39%)
Query: 110 DAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFIS--KQPKVTG 167
+ A VN + + LM A + + D + R IL AG D +DF S K K G
Sbjct: 162 EGADVNARHRLGWTALMVAAISRNDSVVR-ILLAAGADPN----LGDDFSSVYKTAKEQG 216
Query: 168 ATSGPIVGS---NFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDD-RFGRLLF----ND 219
S ++ + +F L+N K L A L+DD R + L N
Sbjct: 217 IHSLEVLVTREDDFNNRLNNRASFK--------GCTALHYAVLADDYRTVKELLDGGANP 268
Query: 220 IRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP-----VIGR 274
++ NE A G + E KYQ EK E R L+ +IG+
Sbjct: 269 LQRNEMGHTPLDYAREGEVMKLLRTSEAKYQ--EKQRKREAEERRRFPLEQRLKEHIIGQ 326
Query: 275 DDEIRRCIQILSRRTKN------NPVI---IGEPGVGKTAIAEGLAQ 312
+ I + RR +N +P++ +G G+GKT +A+ A+
Sbjct: 327 ESAIAT-VGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 372
Score = 37 (18.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 281 YAREGEVMKLLRTSEAKYQEKQRKREAEER 310
>RGD|621328 [details] [associations]
symbol:Clpb "ClpB caseinolytic peptidase B homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0034605 "cellular response to heat" evidence=ISO]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF00023 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS50088 SMART:SM00248 SMART:SM00382 RGD:621328
GO:GO:0005739 GO:GO:0005524 GO:GO:0034605 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03695 CTD:81570 HOGENOM:HOG000006543
HOVERGEN:HBG025978 OrthoDB:EOG4KKZ2V EMBL:AB027570 IPI:IPI00203340
RefSeq:NP_075236.1 UniGene:Rn.21256 ProteinModelPortal:Q9WTT2
STRING:Q9WTT2 PRIDE:Q9WTT2 GeneID:65041 KEGG:rno:65041
InParanoid:Q9WTT2 NextBio:613860 ArrayExpress:Q9WTT2
Genevestigator:Q9WTT2 GermOnline:ENSRNOG00000019693 Uniprot:Q9WTT2
Length = 677
Score = 442 (160.7 bits), Expect = 6.1e-48, Sum P(2) = 6.1e-48
Identities = 83/199 (41%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 299 REAEERRRFPLEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 357
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGY+G+EEGGQLT+ +++ P
Sbjct: 358 TELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCP 417
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 418 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 475
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 476 ALQLRQEAL-EMSRNRIAE 493
Score = 131 (51.2 bits), Expect = 6.1e-48, Sum P(2) = 6.1e-48
Identities = 37/118 (31%), Positives = 65/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ ++ + + FR EFL RI+E + F P E+ ++V
Sbjct: 491 IAENLGDVQISDKITISKNFKENMIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 550
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ +GAR +K +++ V N++A A
Sbjct: 551 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVQYGARSIKHEVERRVVNQLAAA 607
Score = 41 (19.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 294 VIIGEPGVGKTAIAEGLAQ 312
+ +G G+GKT +A+ A+
Sbjct: 348 LFLGSSGIGKTELAKQTAK 366
>UNIPROTKB|Q9H078 [details] [associations]
symbol:CLPB "Caseinolytic peptidase B protein homolog"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0034605 "cellular
response to heat" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
GO:GO:0034605 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03695 CTD:81570
HOGENOM:HOG000006543 HOVERGEN:HBG025978 OrthoDB:EOG4KKZ2V
EMBL:AL136909 EMBL:AL834484 EMBL:AK023214 EMBL:AK302006
EMBL:AK302069 EMBL:AP000593 EMBL:AP002892 EMBL:AP003785
EMBL:BC006404 IPI:IPI00006615 IPI:IPI00216192 IPI:IPI00910365
IPI:IPI01014146 RefSeq:NP_001245321.1 RefSeq:NP_001245322.1
RefSeq:NP_001245323.1 RefSeq:NP_110440.1 UniGene:Hs.523877
ProteinModelPortal:Q9H078 SMR:Q9H078 IntAct:Q9H078
MINT:MINT-1196059 STRING:Q9H078 PhosphoSite:Q9H078 DMDM:25009267
PaxDb:Q9H078 PRIDE:Q9H078 DNASU:81570 Ensembl:ENST00000294053
Ensembl:ENST00000538039 GeneID:81570 KEGG:hsa:81570 UCSC:uc001osj.3
UCSC:uc001osk.3 GeneCards:GC11M072008 HGNC:HGNC:30664 HPA:HPA039006
neXtProt:NX_Q9H078 PharmGKB:PA142672092 InParanoid:Q9H078
PhylomeDB:Q9H078 GenomeRNAi:81570 NextBio:71868 ArrayExpress:Q9H078
Bgee:Q9H078 CleanEx:HS_CLPB Genevestigator:Q9H078
GermOnline:ENSG00000162129 Uniprot:Q9H078
Length = 707
Score = 442 (160.7 bits), Expect = 9.1e-48, Sum P(3) = 9.1e-48
Identities = 84/199 (42%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 329 REAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 387
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P
Sbjct: 388 TELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCP 447
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 448 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 505
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 506 ALQLRQEAL-EMSRNRIAE 523
Score = 135 (52.6 bits), Expect = 9.1e-48, Sum P(3) = 9.1e-48
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 521 IAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 580
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 581 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 637
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 218 NDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP-----VI 272
N ++ NE A G + E KYQ EK E R L+ +I
Sbjct: 291 NPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQ--EKQRKREAEERRRFPLEQRLKEHII 348
Query: 273 GRDDEIRRCIQILSRRTKN------NPVI---IGEPGVGKTAIAEGLAQ 312
G++ I + RR +N +P++ +G G+GKT +A+ A+
Sbjct: 349 GQESAIAT-VGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 396
Score = 37 (18.1 bits), Expect = 9.1e-48, Sum P(3) = 9.1e-48
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 305 YAREGEVMKLLRTSEAKYQEKQRKREAEER 334
>UNIPROTKB|H0YGM0 [details] [associations]
symbol:CLPB "Caseinolytic peptidase B protein homolog"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
OMA:TRKLDIR EMBL:AP000593 EMBL:AP002892 EMBL:AP003785
HGNC:HGNC:30664 Ensembl:ENST00000535990 Bgee:H0YGM0 Uniprot:H0YGM0
Length = 712
Score = 442 (160.7 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 84/199 (42%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 334 REAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 392
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P
Sbjct: 393 TELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCP 452
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 453 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 510
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 511 ALQLRQEAL-EMSRNRIAE 528
Score = 135 (52.6 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 526 IAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 585
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 586 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 642
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 218 NDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDLTELARSGKLDP-----VI 272
N ++ NE A G + E KYQ EK E R L+ +I
Sbjct: 296 NPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQ--EKQRKREAEERRRFPLEQRLKEHII 353
Query: 273 GRDDEIRRCIQILSRRTKN------NPVI---IGEPGVGKTAIAEGLAQ 312
G++ I + RR +N +P++ +G G+GKT +A+ A+
Sbjct: 354 GQESAIAT-VGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 401
Score = 37 (18.1 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 310 YAREGEVMKLLRTSEAKYQEKQRKREAEER 339
>UNIPROTKB|H0YFF5 [details] [associations]
symbol:CLPB "Caseinolytic peptidase B protein homolog"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0017111
EMBL:AP000593 EMBL:AP002892 EMBL:AP003785 HGNC:HGNC:30664
Ensembl:ENST00000544382 Uniprot:H0YFF5
Length = 327
Score = 442 (160.7 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 84/199 (42%), Positives = 137/199 (68%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
+++E + LE+ L + +IGQ+ A+ +V AIRR G D P+ F+F+G +G+GK
Sbjct: 107 REAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGK 165
Query: 707 TELGKALADFLF-NTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRP 765
TEL K A ++ + + +R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P
Sbjct: 166 TELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCP 225
Query: 766 YSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQ 825
+VVLFDE++KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I +
Sbjct: 226 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--H 283
Query: 826 SVQDSKEAVYEVMKKQVVE 844
++Q +EA+ E+ + ++ E
Sbjct: 284 ALQLRQEAL-EMSRNRIAE 301
Score = 37 (18.1 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 553 WSREKDLMSRIRSIKEEIDRVNLEMEAAER 582
++RE ++M +R+ + + + EA ER
Sbjct: 83 YAREGEVMKLLRTSEAKYQEKQRKREAEER 112
>TAIR|locus:2085592 [details] [associations]
symbol:AT3G45450 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR003959
InterPro:IPR004176 Pfam:PF00004 Pfam:PF02861 GO:GO:0005524
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009941
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218211 HSSP:P03815 KO:K03696 EMBL:AL138657
IPI:IPI00545666 PIR:T47485 RefSeq:NP_190131.1 UniGene:At.53754
ProteinModelPortal:Q9M1G2 SMR:Q9M1G2 PaxDb:Q9M1G2 PRIDE:Q9M1G2
EnsemblPlants:AT3G45450.1 GeneID:823685 KEGG:ath:AT3G45450
TAIR:At3g45450 InParanoid:Q9M1G2 OMA:EAIQITT PhylomeDB:Q9M1G2
ProtClustDB:CLSN2915415 Genevestigator:Q9M1G2 Uniprot:Q9M1G2
Length = 341
Score = 407 (148.3 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 93/189 (49%), Positives = 122/189 (64%)
Query: 264 RSGKLDPVIGRDDEIRRCIQILSRRT-KNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPET 322
R GKLDPV+GR +I+R +QIL+RRT +NN +IG+PGVGK AIAEG+AQRI GDVPET
Sbjct: 149 RRGKLDPVVGRQPQIKRVVQILARRTCRNNACLIGKPGVGKRAIAEGIAQRIASGDVPET 208
Query: 323 LQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFIDELHTIIGAGNQSG 382
++ + VAG C + R + ++EV + IILFIDE+H +IGAG G
Sbjct: 209 IKGKMN--------VAGNCGWNEIRWRSRGKIEEVYGQSDDIILFIDEMHLLIGAGAVEG 260
Query: 383 AMDASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILR 442
A+DA+N+LKP L R EL +YR +IE DPALERRFQ V +P+VE I I
Sbjct: 261 AIDAANILKPALERCEL---------QYRKHIENDPALERRFQPVKVPEPTVEEAIQITT 311
Query: 443 GLRERYELH 451
L + E++
Sbjct: 312 VLAKGKEVN 320
Score = 69 (29.3 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 97 FTEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAG 145
FTEKA + I A + AR TEH++ +L+ + G+A ++L G
Sbjct: 5 FTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMG 53
Score = 48 (22.0 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 181 LLSNAQRIKKEMEDDFVSVEHLLLAFLSDDR-FGRLLFNDIRLNEKDLKDAVKAVRG 236
+++ AQ + + +F EH+LL+ + + + + +N KD + V+ + G
Sbjct: 12 VITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 68
>UNIPROTKB|F5GX99 [details] [associations]
symbol:CLPB "Caseinolytic peptidase B protein homolog"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS50088
SMART:SM00248 SMART:SM00382 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0017111 EMBL:AP000593 EMBL:AP002892 EMBL:AP003785
HGNC:HGNC:30664 IPI:IPI01013741 ProteinModelPortal:F5GX99
SMR:F5GX99 Ensembl:ENST00000535477 ArrayExpress:F5GX99 Bgee:F5GX99
Uniprot:F5GX99
Length = 501
Score = 444 (161.4 bits), Expect = 7.0e-41, P = 7.0e-41
Identities = 109/302 (36%), Positives = 177/302 (58%)
Query: 558 DLMSRIRSIKEE-IDRVNLEMEAAERDYD--LNRAAELKYGTMISLQRQLEEAEKNLSEF 614
D S ++ KE+ I + + + E D++ LN A K T + L + + + E
Sbjct: 198 DFSSVYKTAKEQGIHSLEV-LITREDDFNNRLNNRASFKGCTALHYA-VLADDYRTVKEL 255
Query: 615 QKSG-HSLLREEV--TDLDIAEI--VSKWTGIPLSSLQQSEREKLVM------LEEVLHK 663
G + L R E+ T LD A V K + Q+ +R++ LE+ L +
Sbjct: 256 LDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKE 315
Query: 664 RVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLF-NTEN 722
+IGQ+ A+ +V AIRR G D P+ F+F+G +G+GKTEL K A ++ + +
Sbjct: 316 HIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKK 374
Query: 723 ALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVF 782
+R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P +VVLFDE++KAH DV
Sbjct: 375 GFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVL 434
Query: 783 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQV 842
I+LQL D+GR+TD +G+T+ + + IMTSN+ S I + ++Q +EA+ E+ + ++
Sbjct: 435 TIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--HALQLRQEAL-EMSRNRI 491
Query: 843 VE 844
E
Sbjct: 492 AE 493
>UNIPROTKB|Q7Z777 [details] [associations]
symbol:CLPB "Caseinolytic peptidase B protein homolog"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001270 InterPro:IPR013093 Pfam:PF07724 PRINTS:PR00300
GO:GO:0005524 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
EMBL:AP000593 EMBL:AP002892 EMBL:AP003785 UniGene:Hs.523877
HGNC:HGNC:30664 EMBL:BC006257 IPI:IPI01011473 HSSP:Q9RA63
SMR:Q7Z777 STRING:Q7Z777 Ensembl:ENST00000538021 UCSC:uc001osi.3
Uniprot:Q7Z777
Length = 315
Score = 320 (117.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 58/129 (44%), Positives = 94/129 (72%)
Query: 716 FLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIE 775
+L + +R+DMSE+ E+H V++ +G+PPGYVG+EEGGQLT+ +++ P +VVLFDE++
Sbjct: 6 YLLVSTQGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVD 65
Query: 776 KAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVY 835
KAH DV I+LQL D+GR+TD +G+T+ + + IMTSN+ S I + ++Q +EA+
Sbjct: 66 KAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ--HALQLRQEAL- 122
Query: 836 EVMKKQVVE 844
E+ + ++ E
Sbjct: 123 EMSRNRIAE 131
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 820 ILETLQSVQDS-KEAVYEVMKKQVVE-LARQTFR-PEFLNRIDEYIVFQPLDSKEISKIV 876
I E L VQ S K + + K+ V+ + + FR EFL RI+E + F P E+ ++V
Sbjct: 129 IAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLV 188
Query: 877 EIQMNRVKDRLKQK-KIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVA 933
++N R KQ+ I L + +E +L + G++ ++GAR +K +++ V N++A A
Sbjct: 189 NKELNFWAKRAKQRHNITLLWDREVADVL-VDGYNVHYGARSIKHEVERRVVNQLAAA 245
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 304 (112.1 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 109/374 (29%), Positives = 171/374 (45%)
Query: 572 RVNLEMEAAERDYDLNRAAELK-YGTMISLQRQL--EEAEKNLSEFQKSGHSLLREEVTD 628
R NL+ +A R + +N Y S +L E K+ +F S + E D
Sbjct: 273 RKNLKHKAVTRSFSVNNDTTKNWYQITKSFASKLVLNENLKSCCDF-----SFIDNEFND 327
Query: 629 LDIAEIVSKWTGIPLSSL----QQSER-EKLVMLEEVL----HKRVIGQDIAVKSVADAI 679
E + K ++ L Q S R K + +E+ L +K+VIGQ A++S+
Sbjct: 328 SLFIEALLKCKHHIIAELAVLNQCSNRISKAIKVEQQLKLDLNKQVIGQREAIESLTKGY 387
Query: 680 RRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTEN---ALVRIDMSEYMEKH 736
S LS+ R I F F GP+GVGKT L D L E A +M +Y +K
Sbjct: 388 LTSNIALSEGPRLI--FTFAGPSGVGKTYLSSIFCDLLNQYEQSGYAFTTFNMEQYADKQ 445
Query: 737 SVSRLVGAPPGYVGYEEG--GQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRI 794
+L G+ G + Y E G LT VR +P V+LFDEIEKAH +V LL +LD G
Sbjct: 446 DGMKLFGS--G-LQYNEANLGVLTSAVRAQPRQVLLFDEIEKAHSNVTQSLLSILDKGIA 502
Query: 795 TDSQGRT-VSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPE 853
D + +SF C+VI T+N+G + Q Q + +++V++ + E
Sbjct: 503 QDQTSQEFISFDQCIVIFTTNLGQEVLANNHQKHQLN---IFDVLRHAENPATKTKLSVE 559
Query: 854 FLNRIDE-Y-IVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDP 911
+NR+ + Y + F PL + E ++N++ D Q+ +D + + + L + P
Sbjct: 560 LINRLAKGYSVAFSPLQINHFVYLAEKELNKINDY--QEMLDFKWPENFASFL-LQSLAP 616
Query: 912 NFGARPVKRVIQQL 925
AR + + +L
Sbjct: 617 EITARKLTSCLAKL 630
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 278 (102.9 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 96/338 (28%), Positives = 164/338 (48%)
Query: 566 IKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEA------EK--NLSEFQKS 617
+K+ + L+ ++A + AE KY T + ++ ++ EK NL F K+
Sbjct: 283 LKDSVGTRTLQ-DSANNTKSWYQLAE-KYTTKLDIKTDIKNCLSIAFNEKKLNLLTFVKA 340
Query: 618 GHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVAD 677
L E + L + + T I +QQ+ L E L+ ++ GQ A++ +A+
Sbjct: 341 LLDLKSESIESLSRSNKLVNHT-IKSMFVQQN-------LTEYLNSKITGQQQAIEHLAN 392
Query: 678 AIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTEN---ALVRIDMSEYME 734
S +S P + F GP+GVGKT L +D+L E+ A+ +M ++
Sbjct: 393 GYLTSC--ISKVNGPRLIYTFAGPSGVGKTFLANVFSDYLNECEHSGYAISTFNMEQFNN 450
Query: 735 KHSVSRLVGAPPGYVGYEEG-GQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGR 793
+ + +RL G+ Y+ + G G LT V+ +P ++LFDEIEKAH +V LL LLD G
Sbjct: 451 EKNSARLFGSGSEYI--DSGVGVLTGTVKAQPRHILLFDEIEKAHSNVIQSLLTLLDSGV 508
Query: 794 ITDSQGRT--VSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFR 851
D Q T V FT C+VI T+N+G + + Q+ Q + +++V++ +
Sbjct: 509 AID-QTLTLPVDFTQCIVIFTTNLGQDVLAKNAQNHQVN---IFDVLRNAENPATKTKLS 564
Query: 852 PEFLNRIDE-Y-IVFQPLDSKEISKIVEIQMNRVKDRL 887
EF+NR+ + Y I F L + + + E +N + +
Sbjct: 565 IEFINRLSKGYSIPFSTLKTNHLISLAEKALNNKSENI 602
Score = 57 (25.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 503 LDEIDRAVLKLEMEKLSLKNDTDK--ASKE-RLSKLEHDLNSLKQ-KQKELNDQWSR--- 555
LDE+ VL ++K L D ++ A+++ L + EH++++ + +N+Q +
Sbjct: 135 LDELFSVVLSKNIDKNRLVKDLEQFIANRDAELKESEHNIDAPSPVTENTINEQQTAFIL 194
Query: 556 EKDLMSRIRSIK 567
EKD +S R +K
Sbjct: 195 EKDYISLDRKLK 206
Score = 37 (18.1 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 184 NAQRIKKEMEDDFVSVEHLLLAFLSDDRF 212
N Q+ +E D++S++ L F ++ F
Sbjct: 186 NEQQTAFILEKDYISLDRKLKNFFNEMTF 214
>TAIR|locus:2118806 [details] [associations]
symbol:AT4G30350 "AT4G30350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0007623 "circadian rhythm"
evidence=IEP] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
GO:GO:0007623 EMBL:AL161576 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000242659 ProtClustDB:CLSN2685616
IPI:IPI00520257 PIR:H85354 RefSeq:NP_194764.1 UniGene:At.23371
ProteinModelPortal:Q9M0C5 SMR:Q9M0C5 PaxDb:Q9M0C5 PRIDE:Q9M0C5
EnsemblPlants:AT4G30350.1 GeneID:829158 KEGG:ath:AT4G30350
TAIR:At4g30350 InParanoid:Q9M0C5 OMA:CANESTI PhylomeDB:Q9M0C5
ArrayExpress:Q9M0C5 Genevestigator:Q9M0C5 Uniprot:Q9M0C5
Length = 924
Score = 156 (60.0 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 661 LHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNT 720
L K V Q A SVA AI + G + ++ MF GP GK+++ AL+D + +
Sbjct: 577 LAKSVWWQHDAASSVAAAITECKHG-NGKSKGDIWLMFTGPDRAGKSKMASALSDLVSGS 635
Query: 721 ENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHQD 780
+ + + S M+ R G + + E VRR P++V++ ++I++A
Sbjct: 636 QPITISLGSSSRMDDGLNIR------GKTALD---RFAEAVRRNPFAVIVLEDIDEADIL 686
Query: 781 VFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSN--IGS 817
+ N + ++ GRI DS GR VS N ++I+T+N +GS
Sbjct: 687 LRNNVKIAIERGRICDSYGREVSLGNVIIILTANSSLGS 725
Score = 102 (41.0 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 271 VIGRDDEIRRCIQILSRRTKNNPVIIG--EPGVGKTAIAEGLAQRIVRGDVPE-TLQNRK 327
+I R DE +R I+I+ R K NPV++G EP + + + + ++I G+ + L+N +
Sbjct: 233 MIQRTDEAKRVIEIMIRTRKRNPVLVGDSEPHI----LVKEILEKIENGEFSDGALRNFQ 288
Query: 328 LISLDMASLVAGTCYR-GDFEKRLKAVLKEVTKSNGQIILFIDELHTIIG--AGNQSGAM 384
+I L+ LV+ R G+ L E G ++L + +L ++ A N +
Sbjct: 289 VIRLEK-ELVSQLATRLGEISG-----LVETRIGGGGVVLDLGDLKWLVEHPAANGGAVV 342
Query: 385 DASNMLKPMLGRGELRCIGATTLNEYRNYIEKDPALE 421
+ +L+ GR L IG T Y P++E
Sbjct: 343 EMRKLLERYKGR--LCFIGTATCETYLRCQVYYPSME 377
Score = 42 (19.8 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 858 IDEYIVFQPLDSKEI-SKIVEIQMNRVKDRL 887
+D+ I+F+P+D I SK E R + L
Sbjct: 814 VDDAILFRPVDFDSIKSKTAESLKKRFSNGL 844
>TAIR|locus:2007412 [details] [associations]
symbol:AT1G07200 "AT1G07200" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016787
EMBL:AC067971 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000085182 ProtClustDB:CLSN2688559 IPI:IPI00542322
PIR:B86207 RefSeq:NP_001077474.1 UniGene:At.27670
ProteinModelPortal:Q9LML2 PRIDE:Q9LML2 EnsemblPlants:AT1G07200.2
GeneID:837231 KEGG:ath:AT1G07200 TAIR:At1g07200 PhylomeDB:Q9LML2
Genevestigator:Q9LML2 Uniprot:Q9LML2
Length = 979
Score = 140 (54.3 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 644 SSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFM-FMGPT 702
SSL+ + ++ L E+L ++V Q AV +++ I + + + ++ +GP
Sbjct: 608 SSLEHTYQKDFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQASGIWLALLGPD 667
Query: 703 GVGKTELGKALADFLFNTENALVRIDM-SEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVV 761
VGK ++ L++ F + + +D +E+ R G V Y G +L+
Sbjct: 668 KVGKKKVAMTLSEVFFGGKVNYICVDFGAEHCSLDDKFR--GKT--VVDYVTG-ELS--- 719
Query: 762 RRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNI 815
R+P+SVVL + +EKA L + + G+I D GR +S N +V++TS I
Sbjct: 720 -RKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVVVTSGI 772
Score = 80 (33.2 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 36/158 (22%), Positives = 68/158 (43%)
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGE-PGVGKTAIAEGLAQRIVRGDVPETLQNRKLISL 331
G D+ RR ++L R+ K NP++IG + + + G + + LIS+
Sbjct: 218 GFDENSRRIGEVLGRKDKKNPLLIGNCANEALKTFTDSINSGKL-GFLQMDISGLSLISI 276
Query: 332 DMA-SLVAGTCYRGDFEKRLKAV-LKEVTKSNGQ---IILFIDELHTIIGAGNQSGAMDA 386
+ S + + + E R+K L + +G I+L + EL + N + +
Sbjct: 277 EKEISEILADGSKNEEEIRMKVDDLGRTVEQSGSKSGIVLNLGELKVLTSEANAALEILV 336
Query: 387 SNMLKPMLGRG-ELRCIGATTLNE-YRNYIEKDPALER 422
S + + +L IG + NE Y I++ P +E+
Sbjct: 337 SKLSDLLKHESKQLSFIGCVSSNETYTKLIDRFPTIEK 374
Score = 68 (29.0 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 17/86 (19%), Positives = 41/86 (47%)
Query: 847 RQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVT-LLG 905
R + EF+ ++D + F+P+D E++K ++ ++ +R + L KE + +L
Sbjct: 853 RDAWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILA 912
Query: 906 ILGFDPNFGARPVKRVIQQLVENEIA 931
+ G + ++ Q ++ +A
Sbjct: 913 ASWSSLSSGEEEGRTIVDQWMQTVLA 938
Score = 49 (22.3 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 519 SLKNDTDKASKERLSKLEHDLN--SLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLE 576
+LK TD + +L L+ D++ SL +KE+++ + IR +++ R +E
Sbjct: 248 ALKTFTDSINSGKLGFLQMDISGLSLISIEKEISEILADGSKNEEEIRMKVDDLGRT-VE 306
Query: 577 MEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQK 616
++ LN ELK T LE LS+ K
Sbjct: 307 QSGSKSGIVLN-LGELKVLTS-EANAALEILVSKLSDLLK 344
Score = 43 (20.2 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 98 TEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRI 140
TE+A + AV AR + + H + ALL + R +
Sbjct: 13 TEEAARALDDAVVVARRRSHAQTTSLHAVSALLAMPSSILREV 55
>TAIR|locus:2172585 [details] [associations]
symbol:AT5G57710 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR013093 Pfam:PF07724 GO:GO:0005524 EMBL:CP002688
GO:GO:0006950 GO:GO:0080167 EMBL:AB018118 Gene3D:1.10.1780.10
InterPro:IPR023150 UniGene:At.40639 IPI:IPI00519880
RefSeq:NP_200579.1 UniGene:At.43089 ProteinModelPortal:Q9FHH2
SMR:Q9FHH2 PRIDE:Q9FHH2 EnsemblPlants:AT5G57710.1 GeneID:835878
KEGG:ath:AT5G57710 TAIR:At5g57710 HOGENOM:HOG000242659
InParanoid:Q9FHH2 OMA:TDCISAK PhylomeDB:Q9FHH2
ProtClustDB:CLSN2685616 ArrayExpress:Q9FHH2 Genevestigator:Q9FHH2
Uniprot:Q9FHH2
Length = 990
Score = 149 (57.5 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 42/157 (26%), Positives = 80/157 (50%)
Query: 663 KRVIGQDIAVKSVADAIRRSRAGLSDPARPIAS-----FMFMGPTGVGKTELGKALADFL 717
++V Q+ A +VA + + + G + R + S +F GP VGK ++ AL+ +
Sbjct: 618 EKVWWQNDAAAAVAATVSQCKLG-NGKRRGVLSKGDVWLLFSGPDRVGKRKMVSALSSLV 676
Query: 718 FNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKA 777
+ T ++++ + + S + G ++ E V+R P+SV+L ++I++A
Sbjct: 677 YGTNPIMIQLGSRQDAGDGNSS--------FRGKTALDKIAETVKRSPFSVILLEDIDEA 728
Query: 778 HQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSN 814
V + Q +D GRI DS GR +S N + +MT++
Sbjct: 729 DMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMTAS 765
Score = 93 (37.8 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 28/106 (26%), Positives = 56/106 (52%)
Query: 272 IGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPE-TLQNRKLIS 330
+ ++D++ R + IL R K NPV++G+ G+ I E + ++I G+V ++N K++S
Sbjct: 213 VSKNDDVERVMDILGRAKKKNPVLVGDSEPGRV-IRE-ILKKIEVGEVGNLAVKNSKVVS 270
Query: 331 LDMASLVAGTCYRGDFEKRLKAVLKEVTK-SNGQIILFIDELHTII 375
L+ S + + + L+ LK G +IL + +L ++
Sbjct: 271 LEEISSDKALRIK-ELDGLLQTRLKNSDPIGGGGVILDLGDLKWLV 315
Score = 40 (19.1 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 23/116 (19%), Positives = 53/116 (45%)
Query: 790 DDGRITDSQ---GRTVSFTNCVVIMTSNIGSHYILE-TLQSVQDSKEAVYEVMKKQVVEL 845
D+ R+T + G +SF T + GSH + T + QD ++ + Q V
Sbjct: 811 DEERLTKPKKEHGSGLSFDLNQAADTDD-GSHNTSDLTTDNDQD-EQGFSGKLSLQCVPF 868
Query: 846 ARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAV 901
A F + ++R+D+ + F+ +D + + + ++ + + + + + +EA+
Sbjct: 869 A---FH-DMVSRVDDAVAFRAVDFAAVRRRITETLSERFETIIGESLSVEVEEEAL 920
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 262 LARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAI 306
L R+ K +PV+ D E R I+ + ++ + +GE VG A+
Sbjct: 226 LGRAKKKNPVLVGDSEPGRVIREILKKIE-----VGE--VGNLAV 263
>TAIR|locus:2065074 [details] [associations]
symbol:AT2G40130 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR013093 Pfam:PF07724
GO:GO:0005524 EMBL:CP002685 GO:GO:0006950 Gene3D:1.10.1780.10
InterPro:IPR023150 IPI:IPI00530079 RefSeq:NP_973646.1
UniGene:At.11136 ProteinModelPortal:F4IGZ2 PRIDE:F4IGZ2
EnsemblPlants:AT2G40130.2 GeneID:818604 KEGG:ath:AT2G40130
OMA:RNSAYSP Uniprot:F4IGZ2
Length = 910
Score = 141 (54.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 52/211 (24%), Positives = 94/211 (44%)
Query: 652 EKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGK 711
E ++ L V GQD A + ++ A+ S+ S R + +GP VGK +
Sbjct: 535 ESFKIIYRRLTDMVSGQDEAARVISCAL--SQPPKSVTRRDVW-LNLVGPDTVGKRRMSL 591
Query: 712 ALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLF 771
LA+ ++ +E+ + +D+ + + P G + EV+ R P+ VV
Sbjct: 592 VLAEIVYQSEHRFMAVDLGA--AEQGMGGC-DDPMRLRGKTMVDHIFEVMCRNPFCVVFL 648
Query: 772 DEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNI-GS----HYILETLQS 826
+ IEKA + + L + ++ G+ DS GR V N + +MTS+ GS Y E L
Sbjct: 649 ENIEKADEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVMTSSSQGSATTTSYSEEKLLR 708
Query: 827 VQDSKEAVYEVMKKQVVELARQTFRPEFLNR 857
V+ ++ + + + R + P +N+
Sbjct: 709 VK-GRQVEIRIETVSSLPMVRSVYGPTSVNK 738
Score = 89 (36.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 52/238 (21%), Positives = 96/238 (40%)
Query: 197 VSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLK-DAVKAVRGHQRVTDQNPEGKYQALEKY 255
V + L+L+ L D R+ F + +LK ++ V R + Q P
Sbjct: 140 VELRQLILSILDDPVVSRV-FGEAGFRSSELKLSIIRPVPHLLRYSSQQP---LFLCNLT 195
Query: 256 GNDLTELARSGKLDPVIGRDDEI--RRCIQILSRRTKNNPVIIGEPGVGK-TAIAEGLAQ 312
GN R G P + + ++ RR + ++ NP+++G G T+ L +
Sbjct: 196 GNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFTKDKGRNPLLVGVSAYGVLTSYLNSLEK 255
Query: 313 RIVRGDV-PETLQNRKLISL--DMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQ-IILFI 368
G + P L +++ +++ ++ + + R + K + +G ++L
Sbjct: 256 NQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLAEQGSGPGLLLHY 315
Query: 369 DELHTII-GAGNQSGAMDASNMLKPMLGRGELRC--IGATTLNE-YRNYIEKDPALER 422
+L G GN A N + +L R R IGATT NE Y + + P +E+
Sbjct: 316 GDLRVFTNGEGNVPAANYIVNRISELLRRHGRRVWLIGATTSNEVYEKMMRRFPNVEK 373
>TAIR|locus:2079904 [details] [associations]
symbol:AT3G52490 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0019538 "protein
metabolic process" evidence=IEA] InterPro:IPR004176 Pfam:PF02861
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 EMBL:AL050300 EMBL:BT011695
IPI:IPI00538859 PIR:T08450 RefSeq:NP_190817.1 UniGene:At.43056
ProteinModelPortal:Q9SVD0 SMR:Q9SVD0 PRIDE:Q9SVD0
EnsemblPlants:AT3G52490.1 GeneID:824414 KEGG:ath:AT3G52490
TAIR:At3g52490 HOGENOM:HOG000240791 InParanoid:Q9SVD0 OMA:ICSQSAP
PhylomeDB:Q9SVD0 ProtClustDB:CLSN2684774 Genevestigator:Q9SVD0
Uniprot:Q9SVD0
Length = 815
Score = 112 (44.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/180 (23%), Positives = 90/180 (50%)
Query: 264 RSGKL-DPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPET 322
+ GKL PV R++++ I L + + N VI+GE + + + +++ + DVPE
Sbjct: 183 KEGKLLTPV--RNEDVMNVINNLVDKKRRNFVIVGECLATIDGVVKTVMEKVDKKDVPEV 240
Query: 323 LQNRKLISLDMASLVAGTCYRGDFEKRLKAVLKEVTKSNGQ-IILFIDELHTIIGAGNQS 381
L++ K I+L +S G R D E++L+ + V G+ +IL + +L+ + + +
Sbjct: 241 LKDVKFITLSFSSF--GQPSRADVERKLEELETLVKSCVGKGVILNLGDLNWFVESRTRG 298
Query: 382 GAMDASN----MLKPMLGR-GELRCIGATTLNEYRNYIEKDPALERRFQQVFCDQPSVEN 436
++ +N +++ M+ G+L C + ++ + A + + + QPS+E+
Sbjct: 299 SSLYNNNDSYCVVEHMIMEIGKLAC--GLVMGDHGRFWLMGLATSQTYVRCKSGQPSLES 356
Score = 88 (36.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 43/183 (23%), Positives = 80/183 (43%)
Query: 644 SSLQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLS------DPARPIASFM 697
S ++ E L L L +V Q V +A + + R+G S + + ++M
Sbjct: 564 SRFKEMNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKEDTWM 623
Query: 698 FMGPTGV-GKTELGKALADFLFNTENALVRIDMSEYMEKHSVS-------RLVGAPPGYV 749
F V K ++ + LA +F ++++ V I +S + S S RL +
Sbjct: 624 FFQGLDVDAKEKIARELAKLVFGSQDSFVSICLSSFSSTRSDSAEDLRNKRLRDEQS--L 681
Query: 750 GYEEGGQLTEVVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVV 809
Y E + +E V P V+L ++IE+A + ++ GR+ +S G S + +V
Sbjct: 682 SYIE--RFSEAVSLDPNRVILVEDIEQADYLSQVGFKRAVERGRVCNSSGEEASLKDAIV 739
Query: 810 IMT 812
I++
Sbjct: 740 ILS 742
>TAIR|locus:2045653 [details] [associations]
symbol:AT2G29970 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004680 GO:GO:0016787
Gene3D:1.10.1780.10 InterPro:IPR023150 IPI:IPI00543517 PIR:T02488
RefSeq:NP_565689.1 UniGene:At.22058 ProteinModelPortal:O80875
SMR:O80875 PaxDb:O80875 PRIDE:O80875 EnsemblPlants:AT2G29970.1
GeneID:817547 KEGG:ath:AT2G29970 TAIR:At2g29970 eggNOG:NOG291591
HOGENOM:HOG000085182 InParanoid:O80875 OMA:SENTEAW PhylomeDB:O80875
ProtClustDB:CLSN2688559 Genevestigator:O80875 Uniprot:O80875
Length = 1002
Score = 107 (42.7 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 54/189 (28%), Positives = 92/189 (48%)
Query: 657 LEEVLHKRVIGQDIAVKSVADAI---R-RSRAGLSDPARPIASFM-FMGPTGVGKTELGK 711
L E+L ++V Q+ AV ++++ + R SR + A ++ +GP GK ++
Sbjct: 631 LRELLSRKVGFQNEAVNAISEIVCGYRDESRRRNNHVATTSNVWLALLGPDKAGKKKVAL 690
Query: 712 ALADFLFNTENALVRIDMSEYMEKHSVS-RLVGAPPGYVGYEEGGQLTEVVRRRPYSVVL 770
ALA+ ++ + +D + + S+ R G V Y G EV RR SVV
Sbjct: 691 ALAEVFCGGQDNFICVD---FKSQDSLDDRFRGKT--VVDYIAG----EVARRAD-SVVF 740
Query: 771 FDEIEKAH-QDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMT---SNIGSH-YILETLQ 825
+ +EKA D L + + G++ DS GR +S N +V+ T S+ S ++LE +
Sbjct: 741 IENVEKAEFPDQIR-LSEAMRTGKLRDSHGREISMKNVIVVATISGSDKASDCHVLE--E 797
Query: 826 SVQDSKEAV 834
V+ S+E V
Sbjct: 798 PVKYSEERV 806
Score = 92 (37.4 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 52/235 (22%), Positives = 108/235 (45%)
Query: 197 VSVEHLLLAFLSDDRFGRLLFNDIRLNEKDLKDAVKAVRGHQRVTDQNPEGKYQALEK-- 254
V +++ +L+ L D R+ F + D+K V H VT Q ++ + +
Sbjct: 144 VELKYFILSILDDPIVSRV-FGEAGFRSTDIKLDVL----HPPVTSQF-SSRFTSRSRIP 197
Query: 255 --YGNDLTELARSGKLD---PVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEG 309
+ +L E + SG++ P D+ RR ++L+R+ K NP+++G GV
Sbjct: 198 PLFLCNLPE-SDSGRVRFGFPFGDLDENCRRIGEVLARKDKKNPLLVGVCGVEALKTFTD 256
Query: 310 LAQRIVRGDVPETLQNRKLISLDMAS-LVAGTCYRGDFEKRLKAVLKEVTKSNGQIILFI 368
R G +P + ++S+ ++ LV G+ F+ L + + + G++ +
Sbjct: 257 SINRGKFGFLPLEISGLSVVSIKISEVLVDGSRIDIKFDD-LGRLKSGMVLNLGELKVLA 315
Query: 369 DELHTIIGAGNQSGAMDASNMLKPMLGRGELRCIGATTLNE-YRNYIEKDPALER 422
++ ++ + + +++LK L R +L IG+ + NE Y IE+ P +++
Sbjct: 316 SDVFSVDVI--EKFVLKLADLLK--LHREKLWFIGSVSSNETYLKLIERFPTIDK 366
Score = 46 (21.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 516 EKLS--LKNDTDKASKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRI 563
EKL L+N + K L K++ D N L + L +W D+ RI
Sbjct: 447 EKLPSWLRNVEHEHEKGNLGKVKDDPNVLASRIPALQKKWD---DICQRI 493
Score = 44 (20.5 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 12/52 (23%), Positives = 19/52 (36%)
Query: 98 TEKAWEGIVGAVDAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNT 149
TE+ + AV AR + + H + LL + R + NT
Sbjct: 13 TEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRAAHNT 64
>UNIPROTKB|F1P2B1 [details] [associations]
symbol:TOR1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0051085
"chaperone mediated protein folding requiring cofactor"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005788 "endoplasmic reticulum lumen" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0071763 "nuclear
membrane organization" evidence=IEA] InterPro:IPR001270
InterPro:IPR010448 InterPro:IPR017378 Pfam:PF06309
PIRSF:PIRSF038079 PRINTS:PR00300 GO:GO:0005524 GO:GO:0005635
GO:GO:0051260 GO:GO:0005788 GO:GO:0051085 GO:GO:0071763 OMA:GAGPGMK
PANTHER:PTHR10760 GeneTree:ENSGT00390000001920 EMBL:AADN02026599
IPI:IPI00603341 Ensembl:ENSGALT00000006623 Uniprot:F1P2B1
Length = 344
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 646 LQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVG 705
LQ+ E+ L+E L +R+ GQ + K V A+R + + +P+A + G TG G
Sbjct: 62 LQRHEQRVAAALQESLDRRLFGQHLVSKVVVRAVRGFLSN-AQAKKPLALSLH-GWTGTG 119
Query: 706 KTELGKALADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRR- 764
K + K +A+ ++ + L S Y+ H + P + QL +R
Sbjct: 120 KNFVSKIIAESIY--KRGL----KSNYV--HQFVATLHFPHAHSINLYKDQLQSWIRGNV 171
Query: 765 ---PYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYIL 821
P S+ +FDE++K H + + + LD + D VS+ + I SN G+ I
Sbjct: 172 SICPRSIFIFDEMDKMHAGLIDAIKPFLDYYELLDG----VSYRQAIFIFLSNAGAEKIT 227
Query: 822 ET-LQSVQDSKEA-------VYEVMKKQVVELARQTFRPEFL---NRIDEYIVFQPLDSK 870
E L ++ KE + + V F L N ID ++ F PL+ K
Sbjct: 228 EVALDFWRNGKEREDIQLTDMQNALSVSVFNNRNSGFWHSTLIDRNLIDYFVPFLPLEYK 287
Query: 871 EISKIVEIQM 880
+ V +++
Sbjct: 288 HVKMCVRVEI 297
>FB|FBgn0025615 [details] [associations]
symbol:Torsin "Torsin" species:7227 "Drosophila melanogaster"
[GO:0006457 "protein folding" evidence=ISS;NAS] [GO:0005524 "ATP
binding" evidence=ISS;NAS] [GO:0051082 "unfolded protein binding"
evidence=ISS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=ISS;NAS] [GO:0051085 "chaperone mediated protein folding
requiring cofactor" evidence=IEA] [GO:0048085 "adult
chitin-containing cuticle pigmentation" evidence=IMP] [GO:0042053
"regulation of dopamine metabolic process" evidence=IMP]
[GO:0043104 "positive regulation of GTP cyclohydrolase I activity"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR010448 InterPro:IPR017378 Pfam:PF06309
PIRSF:PIRSF038079 GO:GO:0005524 EMBL:AE014298 GO:GO:0040011
GO:GO:0005788 GO:GO:0042053 GO:GO:0051085 GO:GO:0048085
EMBL:AL031766 eggNOG:NOG283963 OMA:GAGPGMK PANTHER:PTHR10760
GeneTree:ENSGT00390000001920 EMBL:AM999060 EMBL:AM999061
EMBL:AM999062 EMBL:AM999063 EMBL:AM999064 EMBL:AM999065
EMBL:AM999066 EMBL:AM999067 EMBL:AM999068 EMBL:AM999069
EMBL:FM246173 EMBL:FM246174 EMBL:FM246175 EMBL:FM246176
EMBL:FM246177 EMBL:FM246178 EMBL:FM246179 EMBL:FM246180
EMBL:FM246181 EMBL:FM246182 EMBL:FM246183 EMBL:FM246184
EMBL:AF236156 EMBL:AY069592 EMBL:BT003553 RefSeq:NP_572178.1
UniGene:Dm.19668 ProteinModelPortal:O77277 SMR:O77277 STRING:O77277
PaxDb:O77277 EnsemblMetazoa:FBtr0070690 GeneID:31399
KEGG:dme:Dmel_CG3024 UCSC:CG3024-RA CTD:31399 FlyBase:FBgn0025615
InParanoid:O77277 OrthoDB:EOG4T4BBC PhylomeDB:O77277
GenomeRNAi:31399 NextBio:773452 Bgee:O77277 GermOnline:CG3024
GO:GO:0043104 Uniprot:O77277
Length = 340
Score = 137 (53.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 55/247 (22%), Positives = 112/247 (45%)
Query: 657 LEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF 716
LE L + +IGQ I + + A++ A + +P+ F G G GK + + +AD
Sbjct: 66 LERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLV-ISFHGQPGTGKNFVAEQIADA 124
Query: 717 LF---NTENALVR-IDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFD 772
++ + N + + + +++ ++ VS Y + + + +R P S+ +FD
Sbjct: 125 MYLKGSRSNYVTKYLGQADFPKESEVSN-------Y-RVKINNAVRDTLRSCPRSLFIFD 176
Query: 773 EIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSV----- 827
E++K VF+ L L+D D T + + +++ GSH I L SV
Sbjct: 177 EVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAI---FIFLSNTAGSH-IASHLGSVMKNGR 232
Query: 828 --QDSKEAVYE-VMKKQVVELARQTFRPEFLNR--IDEYIVFQPLDSKEISKIVEIQMNR 882
+D++ + +E +++K + + + ID +I F P++ + K +E ++ R
Sbjct: 233 LREDTRLSDFEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAELLR 292
Query: 883 VKDRLKQ 889
+ KQ
Sbjct: 293 WRRDPKQ 299
>UNIPROTKB|I3LEE0 [details] [associations]
symbol:I3LEE0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR013093
Pfam:PF07724 GO:GO:0005524 GeneTree:ENSGT00390000012961
Ensembl:ENSSSCT00000029361 Uniprot:I3LEE0
Length = 58
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 696 FMFMGPTGVGKTELGKALADFLF-NTENALVRIDMSEYMEKHSVS 739
F+F+G +G+GKTEL K A ++ + + +R+DMSE+ E+H VS
Sbjct: 10 FLFLGSSGIGKTELAKQTARYMHKDAKKGFIRLDMSEFQERHEVS 54
>TAIR|locus:2145141 [details] [associations]
symbol:AT5G52280 "AT5G52280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
EMBL:AB019226 InterPro:IPR019448 Pfam:PF10358 EMBL:AB025603
HOGENOM:HOG000084896 ProtClustDB:CLSN2715265 EMBL:BT014679
EMBL:AK176344 IPI:IPI00525209 RefSeq:NP_200041.1 UniGene:At.43034
ProteinModelPortal:Q9FHD1 PaxDb:Q9FHD1 PRIDE:Q9FHD1
EnsemblPlants:AT5G52280.1 GeneID:835304 KEGG:ath:AT5G52280
TAIR:At5g52280 eggNOG:euNOG07091 InParanoid:Q9FHD1 OMA:CADLEDE
PhylomeDB:Q9FHD1 ArrayExpress:Q9FHD1 Genevestigator:Q9FHD1
Uniprot:Q9FHD1
Length = 853
Score = 132 (51.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 52/174 (29%), Positives = 87/174 (50%)
Query: 493 KMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKE-RLSKLEHDLNSLKQKQKELND 551
+++ SK + + +R E EKL L+N D+A E RL + D +++ + E+ D
Sbjct: 300 RIQELSKEVSCLKGERDGAMEECEKLRLQNSRDEADAESRLRCISEDSSNMIE---EIRD 356
Query: 552 QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNL 611
+ S EKDL S ++ + N + A RD LN E K + SL LEEA+K L
Sbjct: 357 ELSCEKDLTSNLKLQLQRTQESNSNLILAVRD--LNEMLEQKNNEISSLNSLLEEAKK-L 413
Query: 612 SEFQ--KSGHS---LLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEV 660
E + SG++ L++++ DLD W L S ++ E+ ++L+E+
Sbjct: 414 EEHKGMDSGNNEIDTLKQQIEDLD-------WE---LDSYKKKNEEQEILLDEL 457
Score = 57 (25.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/83 (25%), Positives = 45/83 (54%)
Query: 822 ETLQSVQDSKEAVYEVMKKQVVE-LARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQM 880
E + + D YE +K++ + ++ + + E N DEY LDSK+I ++ Q+
Sbjct: 448 EEQEILLDELTQEYESLKEENYKNVSSKLEQQECSNAEDEY-----LDSKDIIDELKSQI 502
Query: 881 NRVKDRLKQKKIDLHYTKEAVTL 903
++ +LKQ+ ++ Y++ +T+
Sbjct: 503 EILEGKLKQQSLE--YSECLITV 523
>UNIPROTKB|F1MX93 [details] [associations]
symbol:Bt.112041 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002710
InterPro:IPR007087 Pfam:PF00063 Pfam:PF00612 PRINTS:PR00193
PROSITE:PS00028 PROSITE:PS50096 PROSITE:PS51126 SMART:SM00015
SMART:SM00242 GO:GO:0005524 GO:GO:0008270 InterPro:IPR018444
Pfam:PF01843 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00700000104100 OMA:NHGLVEK EMBL:DAAA02028993
EMBL:DAAA02028994 IPI:IPI00999519 ProteinModelPortal:F1MX93
Ensembl:ENSBTAT00000004905 Uniprot:F1MX93
Length = 1770
Score = 131 (51.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 99/471 (21%), Positives = 204/471 (43%)
Query: 485 VDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKL--EHDLNSL 542
V+E AKL+ + I+ ++I LKL+ + LK D +K+ + E L
Sbjct: 982 VEEKLAKLQKHNSELEIQKEQIQ---LKLQEKTEELKEKMDNLTKQLFDDVRKEEQQRVL 1038
Query: 543 KQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAA--ELKYGTMISL 600
+K EL Q D +IRS+KEEI + E + + R +LK G + L
Sbjct: 1039 LEKSFELKTQ-----DYEKQIRSLKEEIKALKDEKMQLQHQLEEERVTSDDLK-GEVAWL 1092
Query: 601 QRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLE-E 659
+Q K +SEF+K L +++ D+ + V + + R+ L + E
Sbjct: 1093 SKQA----KTISEFEKEIELLQTQKI---DVEKHVQSQKREMREKMSEITRQLLESYDIE 1145
Query: 660 VLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF--- 716
+ R+ +D+ + + + GL R + + F + E+ +AL +F
Sbjct: 1146 DVRNRLSLEDLEHLNEDGELWFAYEGLKKATRVLENH-FQSQKDCYEKEI-EAL-NFKVV 1202
Query: 717 -LFNTENALVRI-----DMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVR-RRPYSVV 769
L N L ++ D++E + +H V+RL +++ Q++E+ + +R +
Sbjct: 1203 HLSQEINHLQKLFREENDINESI-RHEVTRLTSENMMIPDFKQ--QISELEKQKRDLEIR 1259
Query: 770 LFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQD 829
L ++ E + + Q + +Q +T+ N I T +++ +Q +Q+
Sbjct: 1260 LNEQTETMKGKLEELSNQSNHNQEEEGTQSKTIEAQN--EIHTKE--KEKLMDKIQEIQE 1315
Query: 830 SKEAVYEVMKKQVVELARQTFRPEFLN-RIDEYIVFQPLDSKEISKIVEIQMNRVKDRLK 888
+ E + + + + + +F+ E +++ + + LD KE ++++ ++VK K
Sbjct: 1316 ASEHLRK--QSETENEVKSSFQQEASRLTMEKRDLEEELDMKE--RVIKKLQDQVKTLTK 1371
Query: 889 --QKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 937
+K D+H + LG+L + A+ ++ +I L + V ++ G
Sbjct: 1372 TIEKANDVHLSSGPKEYLGMLEYKREDEAKLIQNLILDLKPRGVVVNMIPG 1422
Score = 61 (26.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 249 YQALEKYGNDLTEL---ARSGKLDPVIGRDDEIRRCIQILSRRTKNNPVII-GEPGVGKT 304
Y+ L YG+ + G +DP I E + ++R KN +I+ GE G GKT
Sbjct: 140 YKQLPIYGDPIIHAYSGQNMGDMDPHIFAVAE--EAYKQMARNNKNQSIIVSGESGAGKT 197
Query: 305 AIA 307
A
Sbjct: 198 VSA 200
>RGD|1310101 [details] [associations]
symbol:Tor3a "torsin family 3, member A" species:10116 "Rattus
norvegicus" [GO:0003855 "3-dehydroquinate dehydratase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005788
"endoplasmic reticulum lumen" evidence=IEA;ISO] [GO:0051085
"chaperone mediated protein folding requiring cofactor"
evidence=IEA] InterPro:IPR001270 InterPro:IPR001874
InterPro:IPR010448 Pfam:PF06309 PRINTS:PR00300 ProDom:PD004527
RGD:1310101 GO:GO:0005524 GO:GO:0003855 GO:GO:0005788 GO:GO:0051085
HOGENOM:HOG000115770 HOVERGEN:HBG054188 PANTHER:PTHR10760
GeneTree:ENSGT00390000001920 CTD:64222 eggNOG:NOG294957 OMA:VDLYKEQ
OrthoDB:EOG480HWZ EMBL:BC087678 IPI:IPI00207800
RefSeq:NP_001009683.1 UniGene:Rn.2164 ProteinModelPortal:Q5M936
PRIDE:Q5M936 Ensembl:ENSRNOT00000005726 GeneID:304884
KEGG:rno:304884 UCSC:RGD:1310101 InParanoid:Q5M936 NextBio:653768
ArrayExpress:Q5M936 Genevestigator:Q5M936
GermOnline:ENSRNOG00000004307 Uniprot:Q5M936
Length = 395
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 68/259 (26%), Positives = 114/259 (44%)
Query: 657 LEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF 716
LE L R+ GQ +A K V +A++ + + +A F G +G GK + + L D
Sbjct: 124 LESDLRVRLHGQHLASKLVLEAVK-GYLEMPQVGKALA-LSFHGWSGTGKNFVARMLVDN 181
Query: 717 LFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVG-YEEG--GQLTEVVRRRPYSVVLFDE 773
L+ R M K +S P YV Y+E Q+ E RR S +FDE
Sbjct: 182 LY-------RDGMRSDCVKMFISTFHFPHPKYVDLYKEDLQRQMQETQRRCQQSTFVFDE 234
Query: 774 IEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQD---S 830
EK H + +L L+ R ++ G + ++ SN+G I E + + S
Sbjct: 235 AEKLHPGLLELLEPYLEP-RSPETHG--AELPRAIFLLLSNLGGSVINEVVLGLLKAGWS 291
Query: 831 KEAV----YEV-MKKQVVELARQTFRPEFLNR---IDEYIVFQPLDSKEISKIVEIQMNR 882
+E + E+ ++ ++++ A +F L + ID +I F PL+ + + V
Sbjct: 292 REEITLQHLEMPLQAEIIKSADSSFGSSRLLKKHLIDLFIPFLPLEYRHVRLCV------ 345
Query: 883 VKDRLKQKKIDLHYTKEAV 901
+D + DL YT+EA+
Sbjct: 346 -RDAFLGQ--DLPYTEEAL 361
>UNIPROTKB|Q5M936 [details] [associations]
symbol:Tor3a "Torsin-3A" species:10116 "Rattus norvegicus"
[GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA]
[GO:0005788 "endoplasmic reticulum lumen" evidence=IEA] [GO:0051085
"chaperone mediated protein folding requiring cofactor"
evidence=IEA] InterPro:IPR001270 InterPro:IPR001874
InterPro:IPR010448 Pfam:PF06309 PRINTS:PR00300 ProDom:PD004527
RGD:1310101 GO:GO:0005524 GO:GO:0003855 GO:GO:0005788 GO:GO:0051085
HOGENOM:HOG000115770 HOVERGEN:HBG054188 PANTHER:PTHR10760
GeneTree:ENSGT00390000001920 CTD:64222 eggNOG:NOG294957 OMA:VDLYKEQ
OrthoDB:EOG480HWZ EMBL:BC087678 IPI:IPI00207800
RefSeq:NP_001009683.1 UniGene:Rn.2164 ProteinModelPortal:Q5M936
PRIDE:Q5M936 Ensembl:ENSRNOT00000005726 GeneID:304884
KEGG:rno:304884 UCSC:RGD:1310101 InParanoid:Q5M936 NextBio:653768
ArrayExpress:Q5M936 Genevestigator:Q5M936
GermOnline:ENSRNOG00000004307 Uniprot:Q5M936
Length = 395
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 68/259 (26%), Positives = 114/259 (44%)
Query: 657 LEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADF 716
LE L R+ GQ +A K V +A++ + + +A F G +G GK + + L D
Sbjct: 124 LESDLRVRLHGQHLASKLVLEAVK-GYLEMPQVGKALA-LSFHGWSGTGKNFVARMLVDN 181
Query: 717 LFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVG-YEEG--GQLTEVVRRRPYSVVLFDE 773
L+ R M K +S P YV Y+E Q+ E RR S +FDE
Sbjct: 182 LY-------RDGMRSDCVKMFISTFHFPHPKYVDLYKEDLQRQMQETQRRCQQSTFVFDE 234
Query: 774 IEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQD---S 830
EK H + +L L+ R ++ G + ++ SN+G I E + + S
Sbjct: 235 AEKLHPGLLELLEPYLEP-RSPETHG--AELPRAIFLLLSNLGGSVINEVVLGLLKAGWS 291
Query: 831 KEAV----YEV-MKKQVVELARQTFRPEFLNR---IDEYIVFQPLDSKEISKIVEIQMNR 882
+E + E+ ++ ++++ A +F L + ID +I F PL+ + + V
Sbjct: 292 REEITLQHLEMPLQAEIIKSADSSFGSSRLLKKHLIDLFIPFLPLEYRHVRLCV------ 345
Query: 883 VKDRLKQKKIDLHYTKEAV 901
+D + DL YT+EA+
Sbjct: 346 -RDAFLGQ--DLPYTEEAL 361
>UNIPROTKB|F1NNI2 [details] [associations]
symbol:LONP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008269
InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190 Pfam:PF05362
PIRSF:PIRSF001174 SMART:SM00382 SMART:SM00464 GO:GO:0005524
GO:GO:0043565 GO:GO:0051260 GO:GO:0001666 GO:GO:0003727
GO:GO:0043531 GO:GO:0004252 GO:GO:0042645 GO:GO:0003697
GO:GO:0007005 InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0051880
GO:GO:0004176 PANTHER:PTHR10046 GO:GO:0070361 GO:GO:0070407
TIGRFAMs:TIGR00763 GeneTree:ENSGT00530000063553 GO:GO:0070362
OMA:TGSPEYA EMBL:AADN02063511 EMBL:AADN02063512 IPI:IPI00596955
Ensembl:ENSGALT00000000671 Uniprot:F1NNI2
Length = 740
Score = 133 (51.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 78/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T K + LS K E++L+ L+Q+ +E+
Sbjct: 220 VVDNPIYLSDMGAALTGAESHELQDILEETSIPKRLYKALSLLKKEYELSKLQQRLGREV 279
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 280 EEKIKQTHRKYLLQEQLKIIKKELGLEKEDKDAIEEKFR-ERLKEL-----VVPKHVMDV 333
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ L++ SLL ++ ++ W T IP + E L + VL +
Sbjct: 334 IDEELNKL-----SLLDNHSSEFNVTRNYLDWLTSIPWGKCSEENLE-LSRAQAVLEEDH 387
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G D K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 388 YGMDDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 443
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 444 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 497
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 498 DPSSALLELLD 508
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 94 (38.1 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 661 LHKRVIGQDIAVKSVADAIRRS--RAGLSDPARPIA---SFMFMGPTGVGKTELGKALAD 715
L + VIGQ A ++++ A+R R L +P + + +GPTGVGKTEL + LA
Sbjct: 277 LDEYVIGQSDAKRAISIALRNRWRRKRLDASMKPDVYPKNILMIGPTGVGKTELARRLAK 336
Query: 716 FLFNTENA-LVRIDMSEYME 734
+ NA V+++ ++Y E
Sbjct: 337 II----NAPFVKVEATKYTE 352
Score = 80 (33.2 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 23/85 (27%), Positives = 47/85 (55%)
Query: 853 EFLNRIDEYIVFQPLDSKEISKIV-EIQMNRVKDR---LKQKKIDLHYTKEAVTLLGILG 908
E R+ + +PL+ K+ KI+ E + N+++ + LK + I L +T +A+ + +
Sbjct: 572 ELQGRLPIRVELKPLEQKDFYKILTEPKNNQIQQQKALLKTEDIQLEFTDDALLEVAKIA 631
Query: 909 FDPN-----FGARPVKRVIQQLVEN 928
F+ N GAR + +I+++VE+
Sbjct: 632 FEANAQVQNLGARRLHGIIERIVED 656
Score = 53 (23.7 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 31/163 (19%), Positives = 67/163 (41%)
Query: 502 ELDEIDRAVLKLEMEKLSLKNDTDKAS-KERLSKLEHDLNSLKQKQKELNDQWSREKDLM 560
+++ D LKL+ ++ D +K + + S+ ++++ +K K + S+ K
Sbjct: 48 DIENDDSNPLKLDHIYKKIEKDLEKETVATKASEGTNEIDITTEKPKRGRPKGSKNKQKP 107
Query: 561 SRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEEAEKNLSEFQKSGHS 620
S+ + ++ +E E A K T L+ + E E ++ +
Sbjct: 108 SQSKETTSPLESKPIETETATT----------KTTTTPPLESKPIETETATTKTTTTS-P 156
Query: 621 LLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHK 663
LL + D +++ G+ + +Q + L +LEE L K
Sbjct: 157 LLSKVTNKFDFSDLSDIKNGLVIIPMQSKGKYNLSILEENLEK 199
>MGI|MGI:1353652 [details] [associations]
symbol:Tor3a "torsin family 3, member A" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005788
"endoplasmic reticulum lumen" evidence=ISO;IDA] [GO:0051085
"chaperone mediated protein folding requiring cofactor"
evidence=IEA] InterPro:IPR001270 InterPro:IPR001874
InterPro:IPR010448 Pfam:PF06309 PRINTS:PR00300 ProDom:PD004527
MGI:MGI:1353652 GO:GO:0005524 GO:GO:0003855 GO:GO:0005788
GO:GO:0051085 HOVERGEN:HBG054188 PANTHER:PTHR10760
GeneTree:ENSGT00390000001920 CTD:64222 eggNOG:NOG294957 OMA:VDLYKEQ
OrthoDB:EOG480HWZ EMBL:AJ299404 EMBL:AK007814 EMBL:AK009693
EMBL:AK017908 EMBL:AK151048 EMBL:AK152243 EMBL:AK152358
EMBL:AK152484 EMBL:AK153391 EMBL:AK170296 EMBL:AK172355
EMBL:BC071216 IPI:IPI00460669 RefSeq:NP_075630.2 UniGene:Mm.206737
ProteinModelPortal:Q9ER38 SMR:Q9ER38 STRING:Q9ER38
PhosphoSite:Q9ER38 PaxDb:Q9ER38 PRIDE:Q9ER38
Ensembl:ENSMUST00000079625 Ensembl:ENSMUST00000122242 GeneID:30935
KEGG:mmu:30935 UCSC:uc007dcn.2 InParanoid:Q9ER38 NextBio:307358
Bgee:Q9ER38 CleanEx:MM_TOR3A Genevestigator:Q9ER38
GermOnline:ENSMUSG00000060519 Uniprot:Q9ER38
Length = 385
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 65/229 (28%), Positives = 101/229 (44%)
Query: 654 LVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKAL 713
L LE L R+ GQ +A K V A++ + + +A F G +G GK L + L
Sbjct: 111 LTGLESDLRVRLHGQHLASKLVLRAVK-GYLEMPQVGKALA-LSFHGWSGTGKNFLARIL 168
Query: 714 ADFLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVG-YEEG--GQLTEVVRRRPYSVVL 770
D L+ R M K +S P YV Y+E Q+ E R S +
Sbjct: 169 MDNLY-------RDGMRSDCVKMFISTFHFPHPKYVDTYKEELQRQMQETQWRCHQSTFV 221
Query: 771 FDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQD- 829
FDE EK H + +L L+ R +++G V + + SN+G I E + S+
Sbjct: 222 FDEAEKLHPGLLELLEPYLEP-RSPEARG--VEAPRAIFLFLSNLGGSVINEVVLSLLKA 278
Query: 830 --SKEAV----YEV-MKKQVVELARQTFRPEFLNR---IDEYIVFQPLD 868
S+E + EV ++ +++E A +F L + ID +I F PL+
Sbjct: 279 GWSREEITTQHLEVPLQAEIMEAADSSFGSSGLLKKHLIDHFIPFLPLE 327
>ZFIN|ZDB-GENE-030131-4006 [details] [associations]
symbol:lonp1 "lon peptidase 1, mitochondrial"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PROSITE:PS01046 SMART:SM00382 SMART:SM00464
ZFIN:ZDB-GENE-030131-4006 GO:GO:0005524 GO:GO:0006508 GO:GO:0004252
InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0004176
PANTHER:PTHR10046 TIGRFAMs:TIGR00763 KO:K08675 CTD:9361
GeneTree:ENSGT00530000063553 EMBL:CU498832 EMBL:CU633983
IPI:IPI00486090 RefSeq:XP_691712.4 UniGene:Dr.121787
UniGene:Dr.79254 Ensembl:ENSDART00000106143 GeneID:563257
KEGG:dre:563257 NextBio:20884808 Uniprot:E7F2J3
Length = 966
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 105/433 (24%), Positives = 191/433 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E++L+ L+Q+ +E+
Sbjct: 338 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEYELSKLQQRLGREV 397
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ LE E D D A E K+ + R + +
Sbjct: 398 EEKIKQTHRKYLLQEQLKIIKKEL---GLEKE----DKD---AIEEKFRERLR-DRTVPQ 446
Query: 607 AEKNL--SEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHK 663
++ E K G LL ++ ++ W T +P + E +L +EVL +
Sbjct: 447 HIMDVINEELNKLG--LLDNHSSEFNVTRNYLDWLTSMPWGT-NSEENLELRRAKEVLEE 503
Query: 664 RVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENA 723
G D K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 504 DHYGMDDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYF 559
Query: 724 LVRID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AH 778
+ M++ E R VGA PG + L + P +VL DE++K +
Sbjct: 560 RFSVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LVLIDEVDKIGRGY 613
Query: 779 Q-DVFNILLQLLD---DGRITDSQ-GRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEA 833
Q D + LL+LLD + D V + + I T+NI + I E L+ +
Sbjct: 614 QGDPSSALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANI-TDTIPEPLRDRMEMINV 672
Query: 834 VYEVMKKQVVELARQTFRPEF--LNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKK 891
V ++++ +A + P+ L +DE V ++ + ++ ++ R QK+
Sbjct: 673 SGYVAQEKLA-IAEKYLVPQLRTLCGLDEQKV--KINPEALNLLIRQYCRESGVRNLQKQ 729
Query: 892 IDLHYTKEAVTLL 904
++ + K A ++
Sbjct: 730 VEKVFRKVAFRIV 742
>TIGR_CMR|APH_0968 [details] [associations]
symbol:APH_0968 "ATP-dependent protease La" species:212042
"Anaplasma phagocytophilum HZ" [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PIRSF:PIRSF001174 PROSITE:PS01046 SMART:SM00382
SMART:SM00464 GO:GO:0005524 GO:GO:0005737 GO:GO:0006950
GO:GO:0006508 GO:GO:0004252 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0004176
PANTHER:PTHR10046 eggNOG:COG0466 TIGRFAMs:TIGR00763 KO:K01338
MEROPS:S16.001 OMA:MSKVGVK HOGENOM:HOG000261410
ProtClustDB:CLSK749501 RefSeq:YP_505535.1 ProteinModelPortal:Q2GJB6
SMR:Q2GJB6 STRING:Q2GJB6 GeneID:3929954 KEGG:aph:APH_0968
PATRIC:20950652 BioCyc:APHA212042:GHPM-980-MONOMER Uniprot:Q2GJB6
Length = 802
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 60/254 (23%), Positives = 114/254 (44%)
Query: 546 QKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDY-DLNRAAELKYGTMISLQRQL 604
QK+++D+ + + ++ + E++ + E+E ++ D + A+E + I+
Sbjct: 211 QKKIDDRVRSQVEATHKVYYLNEQLKAIQRELEESDGSCCDSDSASEFE--KRINATPLS 268
Query: 605 EEA-EKNLSEFQKSGHSLLREEVTDLDIAEIVSKWT-GIPLSSLQQSEREKLVMLEEVLH 662
EEA E+ LS+ ++ L + +I +W +P + + + + ++L+
Sbjct: 269 EEARERALSDLKRYRKMNLMSP--EANIISGYMQWLLDLPWGKFKSGKID-MTSSAKILN 325
Query: 663 KRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFM-FMGPTGVGKTELGKALADFLFNTE 721
G D V + + A L +P S + F+GP GVGKT L K++A+ T
Sbjct: 326 NNHFGMD----KVKERVLEFLAVLKRVKKPKGSVLCFVGPPGVGKTSLAKSIAEA---TG 378
Query: 722 NALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYS-VVLFDEIEKAHQD 780
VR+ + H S + G YVG G + ++ R + + + L DEI+K D
Sbjct: 379 REFVRVSLGGV---HDESEIRGHRRTYVGAMPGKIIKQMKRAKTCNPLFLLDEIDKVGSD 435
Query: 781 VFN----ILLQLLD 790
LL++LD
Sbjct: 436 YRGDPVAALLEVLD 449
>UNIPROTKB|F1SCR1 [details] [associations]
symbol:ROCK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051298 "centrosome duplication" evidence=IEA]
[GO:0045616 "regulation of keratinocyte differentiation"
evidence=IEA] [GO:0031616 "spindle pole centrosome" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0010825 "positive regulation of centrosome duplication"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0017048 "Rho GTPase binding"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
Pfam:PF00169 InterPro:IPR000719 InterPro:IPR000961
InterPro:IPR001849 InterPro:IPR002219 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR011072
InterPro:IPR015008 InterPro:IPR017441 InterPro:IPR017892
InterPro:IPR020684 Pfam:PF00069 Pfam:PF00433 Pfam:PF02185
Pfam:PF08912 PIRSF:PIRSF037568 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50003 PROSITE:PS50011 PROSITE:PS50081 PROSITE:PS51285
SMART:SM00109 SMART:SM00133 SMART:SM00220 SMART:SM00233
GO:GO:0005524 GO:GO:0051298 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0035556 GO:GO:0046872 GO:GO:0030036
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0000910 GO:GO:0001843
GO:GO:0016525 GO:GO:0045616 GO:GO:0031616
GeneTree:ENSGT00700000104041 GO:GO:0010825 PANTHER:PTHR22988:SF3
OMA:PRTSMKV EMBL:CU915597 Ensembl:ENSSSCT00000009440
ArrayExpress:F1SCR1 Uniprot:F1SCR1
Length = 1348
Score = 109 (43.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 61/310 (19%), Positives = 133/310 (42%)
Query: 405 TTLNEYRNYIEKDPALERRFQQVFCDQPSVENTISILRGLRERYELHHGVKIXXXXXXXX 464
T L + +N +E D + + Q +Q E+ + R L ++ +++ ++
Sbjct: 633 TDLEKEKNNMEIDMTYQLKVIQQSLEQEEAEHKATKAR-LADKNKIYESIEEAKSEAMKA 691
Query: 465 XXXXXRYITERFLPDKAIDLVDEAAAK---LKMEITSKPIELDEI--DRAVLKLEMEKLS 519
+ + ER L K +L+ EA + L ++ +++E+ + VL ++ L+
Sbjct: 692 IEMEKKLLEERTLKQKVENLLLEAEKRCSILDCDLKQSQQKINELLKQKDVLNEDVRNLT 751
Query: 520 LK--NDTDKA--SKERLSKLEHDLNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNL 575
LK +T K ++ L +N+LK +K+L + + ++ + E+ +
Sbjct: 752 LKIEQETQKRCLTQNDLKMQTQQVNTLKMSEKQLKQENNHLMEMKMSLEKQNAELRKERQ 811
Query: 576 EMEAAERDYDLNRAAELKYGTMISLQ-RQL-EEAE---KNLSEFQKSGHSLLREEVT--- 627
+ + ++ AE + T+ Q R+L EE E K E Q+ L R +
Sbjct: 812 DADGQMKELQDQLEAEQYFSTLYKTQVRELKEECEEKTKLCKELQQKKQELFRYRDSLAA 871
Query: 628 --DLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIG---QDIAVK--SVADAIR 680
++ + + S+ ++ Q S+ EK +++E+ K ++ Q++ K ++A
Sbjct: 872 QLEITLTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELTEKDTTIASLEE 931
Query: 681 RSRAGLSDPA 690
+R SD A
Sbjct: 932 TNRTLTSDVA 941
Score = 74 (31.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/154 (24%), Positives = 70/154 (45%)
Query: 110 DAARVNNQQVVETEHLMKALLEQKDGLARRILTKAGQDNTKVLQATEDFISKQPKVTGAT 169
D + N + TE + + L Q D L + D L+ T+ SKQ + +
Sbjct: 498 DLKKRNQNSQISTEKVNQ-LQRQLD--ETNALLRTESDTAARLRKTQAESSKQIQQLESN 554
Query: 170 SGPIVGSNFGLLLSNAQRIKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDI--RLN--EK 225
+ + N LL A K ++E DF++++ +L + D G + ND+ R++ E+
Sbjct: 555 NRDLQDKN--CLLETA---KLKLEKDFINLQSVLESERRDRTHGSEIINDLQGRISGLEE 609
Query: 226 DLKDAVKAVRGHQRVTDQNPEGKYQALEKYGNDL 259
DLK+ K + + + + ++ LEK N++
Sbjct: 610 DLKNG-KILLTKVEMEKRQLQERFTDLEKEKNNM 642
>UNIPROTKB|F1SIT4 [details] [associations]
symbol:UACA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043293 "apoptosome" evidence=IEA] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0042307 "positive regulation of protein import
into nucleus" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0008631 "intrinsic
apoptotic signaling pathway in response to oxidative stress"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005739 GO:GO:0005635 GO:GO:0048471
GO:GO:0009411 GO:GO:0008630 GO:GO:0050728 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0043065 GO:GO:0043280 GeneTree:ENSGT00530000063369
GO:GO:0043293 GO:GO:0042347 GO:GO:0008631 GO:GO:0042307 OMA:NRKEDML
EMBL:CU302364 EMBL:CU313322 Ensembl:ENSSSCT00000005485
Uniprot:F1SIT4
Length = 1391
Score = 118 (46.6 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 45/203 (22%), Positives = 106/203 (52%)
Query: 472 ITERFLPDKAIDLVDEAAA----KLKMEITSKPIELDEIDRAVLKLEME----KLSLKND 523
++ +++P K + + A + K E+ + + I++ +K++ E K SL+N
Sbjct: 829 MSNQYVPVKTHEEIKTALSSTLDKANRELVDVKKKCENINQEFVKMKDENETLKRSLENT 888
Query: 524 TDKASKERLSKLEHD--LNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAE 581
++ E +S EH+ ++++++ K++ D ++++ + +EEI ++ E+EA +
Sbjct: 889 QNQVKAEYISLREHEEKMSAVRKSMKKVQDS---SAEVLANYKKGQEEIVTLHAEIEAQK 945
Query: 582 RDYD-LNRAAELKYGTMISLQ---RQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSK 637
R+ D + +LKY +IS + R+ + EK L E Q S + + VT+ ++ + +
Sbjct: 946 RELDTIQECIKLKYAPIISFEECERKFKATEKELKE-QLSEQTQ-KCNVTEEEVKKCKQE 1003
Query: 638 WTGIP--LSSLQQSEREKLVMLE 658
+ + +LQ+ ++K V++E
Sbjct: 1004 NDKLKKEIFTLQKDLKDKNVLVE 1026
Score = 63 (27.2 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 45/208 (21%), Positives = 85/208 (40%)
Query: 773 EIEKAHQDVFNILLQLLDDGRITD-SQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSK 831
E +K +++F + L D + + S +F+ + + +L+ V+ K
Sbjct: 1003 ENDKLKKEIFTLQKDLKDKNVLVENSHEMERAFSRKTEELNRQLKD--LLQKYTEVKGEK 1060
Query: 832 EAVYEVMKKQVVE-LARQTFRPEFLNRIDEYIVFQPLDSKE-ISKIVEIQMNRVKDRLKQ 889
E + E KQ E LA QT L + +++ PL+ E + K + + +K+ LK
Sbjct: 1061 EKLAEENAKQSSEILAAQTL----LQK--QHM---PLEQVEALKKSLNSTIETLKEELKT 1111
Query: 890 KKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIKXXXXXXXXX 949
K+ ++ VT L + + + P+ +Q E V I+K ++
Sbjct: 1112 KQRCYEKEQQTVTQLRQMLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNK 1171
Query: 950 XXXPSAKDLPPRN-KLCIKKLESSSSID 976
S +N K +KKLE+ +D
Sbjct: 1172 TEEVSRLQSEIQNTKQTLKKLETREVVD 1199
Score = 47 (21.6 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 219 DIRLNEKDLKDAVKAVRGHQRVTDQNPEG-KYQALEKY--GNDLTELARSGKLDPVIG-- 273
D+ + +DLK+ ++ ++ QR+ G + Q E+ +DL + KL ++
Sbjct: 272 DLEIENEDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLK--SEKEKLKSLLATK 329
Query: 274 --RDDEIRRCIQILSRRTK 290
+ +E R I+ L R K
Sbjct: 330 EKQQEESLRTIEALKNRFK 348
Score = 45 (20.9 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 30/98 (30%), Positives = 43/98 (43%)
Query: 61 VSAKLSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAAR--VNN-- 116
+SAKL+ + A KF S L SS E E +E + + + + + N
Sbjct: 593 LSAKLALSIS--AEKFESMKSLLSSEVNEKARKLAEM-EGEYERSLSEIRSLKRELENSK 649
Query: 117 ----QQVVETEH-LMKALLEQKDG-LARRI--LTKAGQ 146
Q V EH +K+ LEQK G L ++I LT Q
Sbjct: 650 AKLAQHVKPEEHEQLKSRLEQKSGELGKKITELTSKNQ 687
>WB|WBGene00004296 [details] [associations]
symbol:rad-50 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR004584
InterPro:IPR007517 Pfam:PF04423 GO:GO:0005524 GO:GO:0009792
GO:GO:0006915 GO:GO:0008270 GO:GO:0006281 GO:GO:0090305
GO:GO:0045132 GO:GO:0004518 GO:GO:0030870 KO:K10866
InterPro:IPR013134 PANTHER:PTHR18867 TIGRFAMs:TIGR00606
PROSITE:PS51131 EMBL:Z78200 UniGene:Cel.17973 GeneID:179678
KEGG:cel:CELE_T04H1.4 UCSC:T04H1.4b.1 CTD:179678
GeneTree:ENSGT00390000018781 HOGENOM:HOG000280712 NextBio:906420
OMA:NELGTHR RefSeq:NP_001122999.1 ProteinModelPortal:A5JYU5
SMR:A5JYU5 STRING:A5JYU5 EnsemblMetazoa:T04H1.4b.1
EnsemblMetazoa:T04H1.4b.2 WormBase:T04H1.4b InParanoid:A5JYU5
ArrayExpress:A5JYU5 Uniprot:A5JYU5
Length = 1312
Score = 128 (50.1 bits), Expect = 0.00054, P = 0.00054
Identities = 54/198 (27%), Positives = 103/198 (52%)
Query: 485 VDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQ 544
++E + KL+ S P E +E+++ V KLE E++ + +A++ L ++ +L +++
Sbjct: 693 INEFSKKLENMTLSFPTEQEELEKLVSKLEKEEIIIVKAEGQANE--LQRIVKELKEVRE 750
Query: 545 KQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQL 604
K ++L+ + + EK +S+ +++++ VN +++ AE DL + G + L Q
Sbjct: 751 KNRKLSTEMAEEKSNLSKN---EKQLETVNAKLKLAE---DL----QTDVGVIQQLYEQT 800
Query: 605 EEAEKN----LSEFQKS---GHSLLREEVTDLD--IAEIVSKWTGIPLSSLQQSEREKLV 655
EE EK +SE S ++ LR++V D D +IV + G L + ER KL
Sbjct: 801 EENEKRYEQLVSESDSSDGLSYTELRKKVEDKDEEYRKIVQE--GEELQKCSE-ERNKLQ 857
Query: 656 M-LEEV-LHKRVIGQDIA 671
L E+ H+ +G+ A
Sbjct: 858 SKLNELGTHRVSLGEAAA 875
>UNIPROTKB|F6UTT0 [details] [associations]
symbol:RAD50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030870 "Mre11 complex" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR004584
InterPro:IPR007517 Pfam:PF04423 GO:GO:0005524 GO:GO:0008270
GO:GO:0006281 GO:GO:0090305 GO:GO:0004518 GO:GO:0030870 KO:K10866
OMA:NDIEEQE InterPro:IPR013134 PANTHER:PTHR18867 TIGRFAMs:TIGR00606
PROSITE:PS51131 GeneTree:ENSGT00390000018781 CTD:10111
EMBL:AAEX03007772 Ensembl:ENSCAFT00000001353 RefSeq:XP_531901.2
GeneID:474674 KEGG:cfa:474674 Uniprot:F6UTT0
Length = 1312
Score = 124 (48.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 47/183 (25%), Positives = 89/183 (48%)
Query: 493 KMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKEL-ND 551
K++I++ +++ ++L E SL + K +KE+LS LE L +Q+++EL N
Sbjct: 874 KLQISTNLQRRQQMEEQTVELSTEVQSLSREI-KDAKEQLSPLETILEKFQQEKEELINK 932
Query: 552 QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDY------DLNRAAELKYGTMISLQRQLE 605
+ K ++ IKE++ ++ M+ E +Y D + E + +I+ QL
Sbjct: 933 KNKSNKIAQDKMNDIKEKVKNIHGYMKDIE-NYIQDGKDDYKKQKENELNQVIA---QLS 988
Query: 606 EAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRV 665
E EK+ K ++R+ D+D +I +W L+ +++E K V E H +
Sbjct: 989 ECEKHKENINKE-MGIMRQ---DIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKE 1044
Query: 666 IGQ 668
+GQ
Sbjct: 1045 MGQ 1047
Score = 56 (24.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVP 320
G +D+ ++ I S T +++G G GKT I E L + I GD P
Sbjct: 16 GIEDKDKQIITFFSPLT----ILVGPNGAGKTTIIECL-KYICTGDFP 58
>UNIPROTKB|Q92878 [details] [associations]
symbol:RAD50 "DNA repair protein RAD50" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP;TAS]
[GO:0030870 "Mre11 complex" evidence=IDA] [GO:0000019 "regulation
of mitotic recombination" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IDA;TAS] [GO:0006310 "DNA recombination" evidence=IDA]
[GO:0007004 "telomere maintenance via telomerase" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006974 "response
to DNA damage stimulus" evidence=IDA] [GO:0007131 "reciprocal
meiotic recombination" evidence=TAS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=IDA] [GO:0031954 "positive regulation of
protein autophosphorylation" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0033674 "positive regulation of kinase
activity" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IMP] Reactome:REACT_216 InterPro:IPR004584
InterPro:IPR007517 Pfam:PF04423 GO:GO:0005524
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
EMBL:CH471062 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0030674 Reactome:REACT_111183 GO:GO:0090305 GO:GO:0000724
GO:GO:0000784 GO:GO:0004518 Pathway_Interaction_DB:bard1pathway
GO:GO:0007131 GO:GO:0007004 Orphanet:145 GO:GO:0045120
GO:GO:0032508 GO:GO:0031954 eggNOG:COG0419 GO:GO:0030870
GO:GO:0033674 GO:GO:0000019 KO:K10866 OMA:NDIEEQE
InterPro:IPR013134 PANTHER:PTHR18867 TIGRFAMs:TIGR00606
PROSITE:PS51131 CTD:10111 EMBL:U63139 EMBL:AF057299 EMBL:AF057300
EMBL:Z75311 EMBL:AC116366 EMBL:AC004042 EMBL:BC062603 EMBL:BC073850
EMBL:BC136436 IPI:IPI00107531 IPI:IPI00305282 IPI:IPI00549205
RefSeq:NP_005723.2 UniGene:Hs.633509 ProteinModelPortal:Q92878
SMR:Q92878 DIP:DIP-33606N IntAct:Q92878 MINT:MINT-100363
STRING:Q92878 PhosphoSite:Q92878 DMDM:60392986 PaxDb:Q92878
PRIDE:Q92878 Ensembl:ENST00000265335 Ensembl:ENST00000378823
GeneID:10111 KEGG:hsa:10111 UCSC:uc003kxh.3 GeneCards:GC05P131920
HGNC:HGNC:9816 HPA:CAB022103 HPA:CAB024979 MIM:604040 MIM:613078
neXtProt:NX_Q92878 Orphanet:240760 PharmGKB:PA34175
HOGENOM:HOG000090195 HOVERGEN:HBG058033 InParanoid:Q92878
OrthoDB:EOG45HRWK ChiTaRS:RAD50 GenomeRNAi:10111 NextBio:38249
ArrayExpress:Q92878 Bgee:Q92878 CleanEx:HS_RAD50
Genevestigator:Q92878 GermOnline:ENSG00000113522 Uniprot:Q92878
Length = 1312
Score = 124 (48.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 493 KMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKEL-ND 551
K++I++ +++ ++L E SL + K +KE++S LE L +Q+++EL N
Sbjct: 874 KLQISTNLQRRQQLEEQTVELSTEVQSLYREI-KDAKEQVSPLETTLEKFQQEKEELINK 932
Query: 552 QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQR---QLEEAE 608
+ + K ++ IKE++ ++ M+ E +Y + + K L + QL E E
Sbjct: 933 KNTSNKIAQDKLNDIKEKVKNIHGYMKDIE-NYIQDGKDDYKKQKETELNKVIAQLSECE 991
Query: 609 KNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRVIGQ 668
K+ + + L+R+ D+D +I +W L+ +++E K V E H + +GQ
Sbjct: 992 KHKEKINEDMR-LMRQ---DIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQ 1047
Score = 56 (24.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVP 320
G +D+ ++ I S T +++G G GKT I E L + I GD P
Sbjct: 16 GIEDKDKQIITFFSPLT----ILVGPNGAGKTTIIECL-KYICTGDFP 58
>WB|WBGene00006754 [details] [associations]
symbol:unc-15 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040011 "locomotion" evidence=IGI;IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0030241 "skeletal muscle myosin thick filament assembly"
evidence=IGI;IMP] [GO:0051493 "regulation of cytoskeleton
organization" evidence=IGI;IMP] [GO:0032982 "myosin filament"
evidence=IDA] [GO:0008092 "cytoskeletal protein binding"
evidence=IPI] InterPro:IPR002928 Pfam:PF01576 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0030016 GO:GO:0040035 eggNOG:NOG12793
GO:GO:0040015 GO:GO:0051493 GO:GO:0003774 GO:GO:0030241 EMBL:Z79694
EMBL:Z72506 GO:GO:0032982 EMBL:X08068 PIR:S04027 PIR:T19296
RefSeq:NP_492085.1 ProteinModelPortal:P10567 SMR:P10567
DIP:DIP-24443N IntAct:P10567 MINT:MINT-116776 STRING:P10567
PaxDb:P10567 PRIDE:P10567 GeneID:172491 KEGG:cel:CELE_F07A5.7
UCSC:F07A5.7.1 CTD:172491 WormBase:F07A5.7a HOGENOM:HOG000267003
InParanoid:P10567 NextBio:875741 ArrayExpress:P10567 Uniprot:P10567
Length = 882
Score = 126 (49.4 bits), Expect = 0.00055, P = 0.00055
Identities = 57/228 (25%), Positives = 105/228 (46%)
Query: 477 LPDKAIDLVDEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKA--SKERLS- 533
L ++A + ++ +LK+ I +EL+ R + + E +K+ +KA KE L+
Sbjct: 384 LLERAREQLERQVGELKVRIDEITVELEAAQRELRAVNAELQKMKHLYEKAVEQKEALAR 443
Query: 534 ---KLEHDLNSLKQKQKELNDQWSREKDLMS-RIRSIKEEIDRVNLEMEAAERDYDLNRA 589
KL +L+ K+ + N + E DL + R+ E+ E +A RD + NRA
Sbjct: 444 ENKKLHDELHEAKEALADANRKL-HELDLENARLAGEIRELQTALKEADAQRRDAE-NRA 501
Query: 590 ----AELKYGTMISLQRQLEEAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSS 645
AEL+ I ++R+L+E E+ + +K+ + + L AE K L
Sbjct: 502 QRALAELQ-ALRIEMERRLQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKK 560
Query: 646 LQQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPI 693
Q+E +L M + L++ I +K ++ ++ +A L D R +
Sbjct: 561 KYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQASLEDTQRQL 608
>UNIPROTKB|E2QT24 [details] [associations]
symbol:RAD50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045120 "pronucleus" evidence=IEA]
[GO:0033674 "positive regulation of kinase activity" evidence=IEA]
[GO:0031954 "positive regulation of protein autophosphorylation"
evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA] [GO:0030674
"protein binding, bridging" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0007004 "telomere
maintenance via telomerase" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA]
[GO:0000019 "regulation of mitotic recombination" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004584 InterPro:IPR007517 Pfam:PF04423 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0006310 GO:GO:0004003
GO:GO:0006302 GO:GO:0090305 GO:GO:0008408 GO:GO:0000784
GO:GO:0007004 GO:GO:0045120 GO:GO:0000014 GO:GO:0031954
GO:GO:0030870 GO:GO:0033674 GO:GO:0000019 InterPro:IPR013134
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 PROSITE:PS51131
Ensembl:ENSCAFT00000001353 Uniprot:E2QT24
Length = 1314
Score = 124 (48.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 47/183 (25%), Positives = 89/183 (48%)
Query: 493 KMEITSKPIELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLNSLKQKQKEL-ND 551
K++I++ +++ ++L E SL + K +KE+LS LE L +Q+++EL N
Sbjct: 876 KLQISTNLQRRQQMEEQTVELSTEVQSLSREI-KDAKEQLSPLETILEKFQQEKEELINK 934
Query: 552 QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDY------DLNRAAELKYGTMISLQRQLE 605
+ K ++ IKE++ ++ M+ E +Y D + E + +I+ QL
Sbjct: 935 KNKSNKIAQDKMNDIKEKVKNIHGYMKDIE-NYIQDGKDDYKKQKENELNQVIA---QLS 990
Query: 606 EAEKNLSEFQKSGHSLLREEVTDLDIAEIVSKWTGIPLSSLQQSEREKLVMLEEVLHKRV 665
E EK+ K ++R+ D+D +I +W L+ +++E K V E H +
Sbjct: 991 ECEKHKENINKE-MGIMRQ---DIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKE 1046
Query: 666 IGQ 668
+GQ
Sbjct: 1047 MGQ 1049
Score = 56 (24.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 273 GRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVP 320
G +D+ ++ I S T +++G G GKT I E L + I GD P
Sbjct: 16 GIEDKDKQIITFFSPLT----ILVGPNGAGKTTIIECL-KYICTGDFP 58
>UNIPROTKB|F6XV93 [details] [associations]
symbol:LONP1 "Lon protease homolog" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR003111
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004815
InterPro:IPR008268 InterPro:IPR008269 InterPro:IPR027065
Pfam:PF00004 Pfam:PF02190 Pfam:PF05362 PIRSF:PIRSF001174
PROSITE:PS01046 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004252 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0004176 PANTHER:PTHR10046
TIGRFAMs:TIGR00763 GeneTree:ENSGT00530000063553 OMA:TGSPEYA
Ensembl:ENSCAFT00000029820 EMBL:AAEX03012511 EMBL:AAEX03012512
Uniprot:F6XV93
Length = 763
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 128 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 187
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 188 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 241
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 242 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 295
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 296 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 351
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 352 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 405
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 406 DPSSALLELLD 416
>UNIPROTKB|F5GZ27 [details] [associations]
symbol:LONP1 "Lon protease homolog" species:9606 "Homo
sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0007568 "aging" evidence=IEA]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0010044 "response to aluminum ion" evidence=IEA] [GO:0043623
"cellular protein complex assembly" evidence=IEA] [GO:0070361
"mitochondrial light strand promoter anti-sense binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PIRSF:PIRSF001174 PROSITE:PS01046 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0006508 GO:GO:0004252
GO:GO:0003697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0004176 EMBL:AC011499
PANTHER:PTHR10046 GO:GO:0070361 TIGRFAMs:TIGR00763 HGNC:HGNC:9479
ChiTaRS:LONP1 IPI:IPI00642982 ProteinModelPortal:F5GZ27 SMR:F5GZ27
PRIDE:F5GZ27 Ensembl:ENST00000540670 ArrayExpress:F5GZ27
Bgee:F5GZ27 Uniprot:F5GZ27
Length = 763
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 128 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 187
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 188 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 241
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 242 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 295
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 296 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 351
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 352 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 405
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 406 DPSSALLELLD 416
>UNIPROTKB|Q59HJ6 [details] [associations]
symbol:LONP1 "Lon protease homolog, mitochondrial"
species:9913 "Bos taurus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005759 "mitochondrial matrix" evidence=IDA]
[GO:0019941 "modification-dependent protein catabolic process"
evidence=IDA] [GO:0070407 "oxidation-dependent protein catabolic
process" evidence=ISS] [GO:0070361 "mitochondrial light strand
promoter anti-sense binding" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=ISS] [GO:0034599 "cellular response to oxidative
stress" evidence=ISS] [GO:0007005 "mitochondrion organization"
evidence=ISS] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0004252 "serine-type endopeptidase activity"
evidence=ISS] [GO:0004176 "ATP-dependent peptidase activity"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0070362 "mitochondrial heavy strand promoter anti-sense
binding" evidence=IEA] [GO:0070182 "DNA polymerase binding"
evidence=IEA] [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR003111
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004815
InterPro:IPR008268 InterPro:IPR008269 InterPro:IPR027065
Pfam:PF00004 Pfam:PF02190 Pfam:PF05362 PROSITE:PS01046
SMART:SM00382 SMART:SM00464 GO:GO:0005524 GO:GO:0034599
GO:GO:0043565 GO:GO:0051260 GO:GO:0001666 GO:GO:0003727
GO:GO:0043531 GO:GO:0004252 GO:GO:0042645 GO:GO:0003697
GO:GO:0006515 GO:GO:0007005 InterPro:IPR015947 SUPFAM:SSF88697
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0051880 GO:GO:0004176 PANTHER:PTHR10046
MEROPS:S16.002 eggNOG:COG0466 GO:GO:0070361 GO:GO:0070407
HAMAP:MF_03120 TIGRFAMs:TIGR00763 HOGENOM:HOG000261409 KO:K08675
EMBL:AB208555 EMBL:BC133505 IPI:IPI00685576 RefSeq:NP_001015569.2
UniGene:Bt.43820 HSSP:P0A9M0 ProteinModelPortal:Q59HJ6
STRING:Q59HJ6 PRIDE:Q59HJ6 Ensembl:ENSBTAT00000002350 GeneID:510796
KEGG:bta:510796 CTD:9361 GeneTree:ENSGT00530000063553
HOVERGEN:HBG000798 InParanoid:Q59HJ6 OrthoDB:EOG4PK273
NextBio:20869619 GO:GO:0070362 Uniprot:Q59HJ6
Length = 961
Score = 126 (49.4 bits), Expect = 0.00061, P = 0.00061
Identities = 80/311 (25%), Positives = 138/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 325 VVDNPIYLSDMGAALTGAESHELQEVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 384
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 385 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 438
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP E L + VL +
Sbjct: 439 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGK-HSDENLDLARAQAVLEEDH 492
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 493 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 548
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P +VL DE++K +Q
Sbjct: 549 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LVLIDEVDKIGRGYQG 602
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 603 DPSSALLELLD 613
>UNIPROTKB|K7EJE8 [details] [associations]
symbol:LONP1 "Lon protease homolog" species:9606 "Homo
sapiens" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PIRSF:PIRSF001174 PROSITE:PS01046 SMART:SM00382
SMART:SM00464 InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC011499
PANTHER:PTHR10046 TIGRFAMs:TIGR00763 HGNC:HGNC:9479
Ensembl:ENST00000590729 Uniprot:K7EJE8
Length = 829
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 194 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 253
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 254 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 307
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 308 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 361
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 362 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 417
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 418 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 471
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 472 DPSSALLELLD 482
>UNIPROTKB|K7EKE6 [details] [associations]
symbol:LONP1 "Lon protease homolog" species:9606 "Homo
sapiens" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PIRSF:PIRSF001174 PROSITE:PS01046 SMART:SM00382
SMART:SM00464 InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC011499
PANTHER:PTHR10046 TIGRFAMs:TIGR00763 HGNC:HGNC:9479
Ensembl:ENST00000585374 Uniprot:K7EKE6
Length = 845
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 210 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 269
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 270 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 323
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 324 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 377
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 378 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 433
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 434 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 487
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 488 DPSSALLELLD 498
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 95 (38.5 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 41/145 (28%), Positives = 64/145 (44%)
Query: 292 NPVIIGEPGVGKTAIAEGLAQRIVRGDVPETLQNRKLISLDMASLVAGTCYRGDFEKRLK 351
N V +G PG GKT +A+ Q +V D+ L N ++I + A + G E+ K
Sbjct: 1599 NRVFLGSPGTGKTTVAKLYGQILV--DLGY-LSNGEVIVKNPADFIGSVI--GGSEQNTK 1653
Query: 352 AVLKEVTKSNGQIILFIDELHTIIGAGNQSGAMDASNMLKPML---------G-RGELRC 401
+L G++++ IDE + + G G + A SN K + G G+ RC
Sbjct: 1654 GILASTL---GKVLV-IDEAYGLYGGGTRDPASSNSNQFKTAVIDTIVAEVQGVPGDDRC 1709
Query: 402 IGATTLNEY-RNYIEK-DPALERRF 424
+ E R + +P L RRF
Sbjct: 1710 VLLLGYEEQMREMFQNVNPGLSRRF 1734
Score = 76 (31.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 27/127 (21%), Positives = 60/127 (47%)
Query: 660 VLHKRVIGQDIAVKSVAD---AIRRSRAGLSDPARPIA-SFMFMGPTGVGKTELGKALAD 715
+L + ++G + + + + +++ R DP + +F+F GP G GKT + +
Sbjct: 1840 MLFQDIVGCESIISKLEEYRQSVKNMRELDMDPKEHVPFNFLFRGPPGSGKTSTARKMGK 1899
Query: 716 FLFNTENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIE 775
++ + + +E +E S + L+G Y+G+ G + E++ + V+L DE
Sbjct: 1900 VYYD----MGLLSSAEVIES-SATDLIGQ---YIGHT-GPKTQELLEKSLGKVLLIDEAY 1950
Query: 776 KAHQDVF 782
+ + F
Sbjct: 1951 RLAEGQF 1957
Score = 63 (27.2 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 41/149 (27%), Positives = 63/149 (42%)
Query: 105 IVGAVDAARVNNQQVVETEHLMKALLEQK-DGLARRILTKAGQDNTKVLQATEDFISKQP 163
I+G A N V+ T LLE+ + L +LT G +TK L D +P
Sbjct: 722 IIGCTTTAAAINASVLNTTSPGVVLLEEAGEILESHVLTALGS-HTKQLIMIGDHQQLRP 780
Query: 164 KVTGATSGPIVGSNFGLLLSNAQR-IKKEMEDDFVSVEHLLLAFLSDDRFGRLLFNDIRL 222
K+ GS + L S +R ++ ++ +H + +S RL + D+
Sbjct: 781 KINNYALSVEKGSGYDLNRSLFERLVESGYPHSTLAKQHRMAPEISA-LVRRLTYPDLLD 839
Query: 223 NEKDLKDAVKAVRGHQ-RVT--DQN-PEG 247
+K K + A RG Q RV D + PEG
Sbjct: 840 GDKT-KTRL-APRGLQNRVVFIDHSQPEG 866
>UNIPROTKB|Q8N8K8 [details] [associations]
symbol:LONP1 "Lon protease homolog" species:9606 "Homo
sapiens" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PIRSF:PIRSF001174 PROSITE:PS01046 SMART:SM00382
SMART:SM00464 GO:GO:0005524 GO:GO:0006508 GO:GO:0004252
InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0004176
EMBL:AC011499 PANTHER:PTHR10046 TIGRFAMs:TIGR00763
HOVERGEN:HBG000798 UniGene:Hs.350265 HGNC:HGNC:9479 HSSP:P08177
EMBL:AK096626 IPI:IPI00334291 ProteinModelPortal:Q8N8K8
IntAct:Q8N8K8 MINT:MINT-1148328 STRING:Q8N8K8 PRIDE:Q8N8K8
Ensembl:ENST00000593119 UCSC:uc002mcy.3 ArrayExpress:Q8N8K8
Bgee:Q8N8K8 Uniprot:Q8N8K8
Length = 895
Score = 125 (49.1 bits), Expect = 0.00072, P = 0.00072
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 260 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 319
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 320 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 373
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 374 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 427
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 428 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 483
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 484 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 537
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 538 DPSSALLELLD 548
>UNIPROTKB|F1NI68 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00818295 Ensembl:ENSGALT00000020019
ArrayExpress:F1NI68 Uniprot:F1NI68
Length = 2142
Score = 129 (50.5 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 53/198 (26%), Positives = 100/198 (50%)
Query: 486 DEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTD-KASKERLSKLEHDLNSLKQ 544
D +LK K +E E+ R + + EK++ + D+ K ++E++ LE+++ SLK
Sbjct: 1469 DSLKEELKRYHEQKDMEQKEVARQLQ--QAEKVAFEKDSRLKEAEEKVLNLENEIGSLKA 1526
Query: 545 KQKELNDQWSREKD--LMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMI-SLQ 601
+ + ++ + K L S+ +KE +R+N E + DL + AE K G++ L
Sbjct: 1527 ECEAKEREFDQMKSAILKSKEEELKELEERLNAENSC--KLADLKKKAEQKIGSIKRELV 1584
Query: 602 RQLEEAEKNLSEFQKSGHSLLREEVTDLD--IAEIVSKWTGIPLSSLQQSEREKLVMLEE 659
RQ+EE E+ L + +++ L ++V + + I + K + S+ + ERE L +E
Sbjct: 1585 RQMEEKEQQLKQDRENQVRHLEQKVQEREAKIESLEEKMKSVRDST--ELEREMLQKIES 1642
Query: 660 VLHKRVIGQDI--AVKSV 675
K + Q+ +KSV
Sbjct: 1643 T--KAAVEQEKNEVIKSV 1658
Score = 60 (26.2 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 23/91 (25%), Positives = 51/91 (56%)
Query: 822 ETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIV-----FQPLDSKE---IS 873
E LQ ++ +K AV E K +V++ +QT E +N++ + ++ Q +S++ I
Sbjct: 1635 EMLQKIESTKAAV-EQEKNEVIKSVQQTHE-EKINKLQKDLIEKNKLLQKYESEQREGID 1692
Query: 874 KIVEIQMNRVKDRLKQKKI--DLHYTKEAVT 902
++E+Q ++ ++ LK+ + H +++VT
Sbjct: 1693 SLLELQ-SKQEELLKKLECAEKRHREEQSVT 1722
Score = 43 (20.2 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 28/130 (21%), Positives = 49/130 (37%)
Query: 5 RLTKTTFAALKSARHNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPNDVVSAK 64
RL K A + LS R + I+ S+S+ E L D +AK
Sbjct: 1309 RLESMVSLTEKEAAISLLSTQHQEERLQLINQVQELSSSVELLRQEKASALEQVDHCTAK 1368
Query: 65 LSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEH 124
LS +F + +++ T+ T+K E +D + Q +
Sbjct: 1369 LSEWKTKAQTRFTQNHEAIKDLQSKLEVSNTQATKKGEE-----LDKLKEELAQQGKDLD 1423
Query: 125 LMKALLEQKD 134
+K++LE+K+
Sbjct: 1424 SLKSVLEEKE 1433
>UNIPROTKB|F1NMQ0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005794 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00579194 Ensembl:ENSGALT00000037470
OMA:AQEVESE ArrayExpress:F1NMQ0 Uniprot:F1NMQ0
Length = 2150
Score = 129 (50.5 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 53/198 (26%), Positives = 100/198 (50%)
Query: 486 DEAAAKLKMEITSKPIELDEIDRAVLKLEMEKLSLKNDTD-KASKERLSKLEHDLNSLKQ 544
D +LK K +E E+ R + + EK++ + D+ K ++E++ LE+++ SLK
Sbjct: 1474 DSLKEELKRYHEQKDMEQKEVARQLQ--QAEKVAFEKDSRLKEAEEKVLNLENEIGSLKA 1531
Query: 545 KQKELNDQWSREKD--LMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMI-SLQ 601
+ + ++ + K L S+ +KE +R+N E + DL + AE K G++ L
Sbjct: 1532 ECEAKEREFDQMKSAILKSKEEELKELEERLNAENSC--KLADLKKKAEQKIGSIKRELV 1589
Query: 602 RQLEEAEKNLSEFQKSGHSLLREEVTDLD--IAEIVSKWTGIPLSSLQQSEREKLVMLEE 659
RQ+EE E+ L + +++ L ++V + + I + K + S+ + ERE L +E
Sbjct: 1590 RQMEEKEQQLKQDRENQVRHLEQKVQEREAKIESLEEKMKSVRDST--ELEREMLQKIES 1647
Query: 660 VLHKRVIGQDI--AVKSV 675
K + Q+ +KSV
Sbjct: 1648 T--KAAVEQEKNEVIKSV 1663
Score = 60 (26.2 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 23/91 (25%), Positives = 51/91 (56%)
Query: 822 ETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIV-----FQPLDSKE---IS 873
E LQ ++ +K AV E K +V++ +QT E +N++ + ++ Q +S++ I
Sbjct: 1640 EMLQKIESTKAAV-EQEKNEVIKSVQQTHE-EKINKLQKDLIEKNKLLQKYESEQREGID 1697
Query: 874 KIVEIQMNRVKDRLKQKKI--DLHYTKEAVT 902
++E+Q ++ ++ LK+ + H +++VT
Sbjct: 1698 SLLELQ-SKQEELLKKLECAEKRHREEQSVT 1727
Score = 43 (20.2 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 28/130 (21%), Positives = 49/130 (37%)
Query: 5 RLTKTTFAALKSARHNKLSLAQSGSRAKSISTFTNFSNSLSRPPIENKLILPPNDVVSAK 64
RL K A + LS R + I+ S+S+ E L D +AK
Sbjct: 1314 RLESMVSLTEKEAAISLLSTQHQEERLQLINQVQELSSSVELLRQEKASALEQVDHCTAK 1373
Query: 65 LSFTTVGFARKFHSSTPLRSSTTGVSQITPTEFTEKAWEGIVGAVDAARVNNQQVVETEH 124
LS +F + +++ T+ T+K E +D + Q +
Sbjct: 1374 LSEWKTKAQTRFTQNHEAIKDLQSKLEVSNTQATKKGEE-----LDKLKEELAQQGKDLD 1428
Query: 125 LMKALLEQKD 134
+K++LE+K+
Sbjct: 1429 SLKSVLEEKE 1438
>RGD|621598 [details] [associations]
symbol:Lonp1 "lon peptidase 1, mitochondrial" species:10116
"Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO;IBA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;IBA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=ISO;IDA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IBA] [GO:0005524 "ATP binding" evidence=ISO;IBA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005759 "mitochondrial matrix"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006508 "proteolysis" evidence=ISO;IDA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IBA] [GO:0007005 "mitochondrion organization"
evidence=ISO;IEP] [GO:0007568 "aging" evidence=IEP] [GO:0009725
"response to hormone stimulus" evidence=IEP] [GO:0010044 "response
to aluminum ion" evidence=IEP] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO;IBA] [GO:0042645 "mitochondrial nucleoid"
evidence=ISO;IBA] [GO:0043531 "ADP binding" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0043623 "cellular protein complex assembly" evidence=IMP]
[GO:0051260 "protein homooligomerization" evidence=ISO;IBA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
evidence=IEA;ISO] [GO:0070182 "DNA polymerase binding"
evidence=IEA;ISO] [GO:0070361 "mitochondrial light strand promoter
anti-sense binding" evidence=ISO;IBA] [GO:0070362 "mitochondrial
heavy strand promoter anti-sense binding" evidence=IEA;ISO]
[GO:0070407 "oxidation-dependent protein catabolic process"
evidence=ISO;IBA] [GO:0070363 "mitochondrial light strand promoter
sense binding" evidence=ISO] [GO:0070364 "mitochondrial heavy
strand promoter sense binding" evidence=ISO] InterPro:IPR003111
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004815
InterPro:IPR008268 InterPro:IPR008269 InterPro:IPR027065
Pfam:PF00004 Pfam:PF02190 Pfam:PF05362 PIRSF:PIRSF001174
PROSITE:PS01046 SMART:SM00382 SMART:SM00464 RGD:621598
GO:GO:0005524 GO:GO:0007568 GO:GO:0010044 GO:GO:0034599
GO:GO:0051260 GO:GO:0001666 GO:GO:0003727 GO:GO:0004252
GO:GO:0042645 GO:GO:0003697 GO:GO:0009725 GO:GO:0006515
GO:GO:0007005 InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0043623
GO:GO:0004176 PANTHER:PTHR10046 MEROPS:S16.002 GO:GO:0070361
GO:GO:0070407 HAMAP:MF_03120 TIGRFAMs:TIGR00763 KO:K08675
HSSP:P0A9M0 CTD:9361 HOVERGEN:HBG000798 EMBL:AB064323
IPI:IPI00205076 RefSeq:NP_596895.1 UniGene:Rn.146805
ProteinModelPortal:Q924S5 IntAct:Q924S5 PhosphoSite:Q924S5
PRIDE:Q924S5 GeneID:170916 KEGG:rno:170916 InParanoid:Q924S5
NextBio:621395 Genevestigator:Q924S5 Uniprot:Q924S5
Length = 950
Score = 125 (49.1 bits), Expect = 0.00077, P = 0.00077
Identities = 78/310 (25%), Positives = 136/310 (43%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 314 VVDNPIYLSDMGAALTGAESHELQDVLEETNILKRLYKALSLLKKEFELSKLQQRLGREV 373
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 374 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 427
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS+ +LL ++ ++ W T IP Q E L + VL +
Sbjct: 428 VDEELSKL-----ALLDNHSSEFNVTRNYLDWLTSIPWGR-QSDENLDLARAQSVLEEDH 481
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K V + I S+ S + + F GP GVGKT + +++A L
Sbjct: 482 YGMEDVKKRVLEFIAVSQLRGSTQGKILC---FHGPPGVGKTSIARSIARALGREYFRFS 538
Query: 726 RIDMSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ-D 780
M++ E R VGA PG + L + P +VL DE++K +Q D
Sbjct: 539 VGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LVLIDEVDKIGRGYQGD 592
Query: 781 VFNILLQLLD 790
+ LL+LLD
Sbjct: 593 PSSALLELLD 602
>UNIPROTKB|P36776 [details] [associations]
symbol:LONP1 "Lon protease homolog, mitochondrial"
species:9606 "Homo sapiens" [GO:0007568 "aging" evidence=IEA]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0010044 "response to aluminum ion" evidence=IEA] [GO:0043623
"cellular protein complex assembly" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0004252
"serine-type endopeptidase activity" evidence=IBA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=IBA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0032042 "mitochondrial DNA metabolic process"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0034599 "cellular response to
oxidative stress" evidence=IC;IDA] [GO:0070182 "DNA polymerase
binding" evidence=IPI] [GO:0005759 "mitochondrial matrix"
evidence=IMP] [GO:0070407 "oxidation-dependent protein catabolic
process" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=NAS]
[GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070361 "mitochondrial light strand promoter
anti-sense binding" evidence=IDA] [GO:0070362 "mitochondrial heavy
strand promoter anti-sense binding" evidence=IDA] [GO:0070363
"mitochondrial light strand promoter sense binding" evidence=IDA]
[GO:0070364 "mitochondrial heavy strand promoter sense binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR003111
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004815
InterPro:IPR008268 InterPro:IPR008269 InterPro:IPR027065
Pfam:PF00004 Pfam:PF02190 Pfam:PF05362 PIRSF:PIRSF001174
PROSITE:PS01046 SMART:SM00382 SMART:SM00464 GO:GO:0005524
GO:GO:0034599 GO:GO:0043565 GO:GO:0051260 GO:GO:0001666
GO:GO:0003727 GO:GO:0043531 GO:GO:0004252 GO:GO:0042645
EMBL:CH471139 GO:GO:0003697 GO:GO:0006515 InterPro:IPR015947
SUPFAM:SSF88697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0051880 GO:GO:0004176
GO:GO:0032042 PANTHER:PTHR10046 MEROPS:S16.002 eggNOG:COG0466
GO:GO:0070361 GO:GO:0070407 HAMAP:MF_03120 TIGRFAMs:TIGR00763
HOGENOM:HOG000261409 KO:K08675 CTD:9361 HOVERGEN:HBG000798
OrthoDB:EOG4PK273 GO:GO:0070362 OMA:TGSPEYA EMBL:U02389
EMBL:HQ204946 EMBL:HQ204947 EMBL:HQ204948 EMBL:HQ204949
EMBL:HQ204950 EMBL:HQ204951 EMBL:HQ204952 EMBL:HQ204953
EMBL:HQ204954 EMBL:HQ204955 EMBL:HQ204956 EMBL:HQ204957
EMBL:HQ204958 EMBL:HQ204959 EMBL:HQ204960 EMBL:HQ204961
EMBL:HQ204962 EMBL:HQ204963 EMBL:HQ204964 EMBL:HQ204965
EMBL:HQ204966 EMBL:HQ204968 EMBL:HQ204969 EMBL:HQ204970
EMBL:HQ204971 EMBL:HQ204972 EMBL:HQ204973 EMBL:HQ204974
EMBL:HQ204975 EMBL:HQ204976 EMBL:HQ204977 EMBL:HQ204978
EMBL:HQ204979 EMBL:HQ204980 EMBL:HQ204981 EMBL:HQ204982
EMBL:HQ204983 EMBL:HQ204984 EMBL:HQ204985 EMBL:AF059309
EMBL:AF059296 EMBL:AF059297 EMBL:AF059298 EMBL:AF059299
EMBL:AF059300 EMBL:AF059301 EMBL:AF059302 EMBL:AF059303
EMBL:AF059304 EMBL:AF059305 EMBL:AF059306 EMBL:AF059307
EMBL:AF059308 EMBL:BC000235 EMBL:X74215 EMBL:X76040 IPI:IPI00005158
PIR:S42366 PIR:S57342 RefSeq:NP_004784.2 UniGene:Hs.350265 PDB:2X36
PDBsum:2X36 ProteinModelPortal:P36776 SMR:P36776 IntAct:P36776
STRING:P36776 PhosphoSite:P36776 DMDM:12644239 PaxDb:P36776
PRIDE:P36776 DNASU:9361 Ensembl:ENST00000360614 GeneID:9361
KEGG:hsa:9361 UCSC:uc002mcx.3 GeneCards:GC19M005691 HGNC:HGNC:9479
HPA:HPA002192 MIM:605490 neXtProt:NX_P36776 PharmGKB:PA162394145
InParanoid:P36776 PhylomeDB:P36776 BRENDA:3.4.21.53 ChiTaRS:LONP1
EvolutionaryTrace:P36776 GenomeRNAi:9361 NextBio:35055
ArrayExpress:P36776 Bgee:P36776 CleanEx:HS_LONP1
Genevestigator:P36776 GermOnline:ENSG00000196365 Uniprot:P36776
Length = 959
Score = 125 (49.1 bits), Expect = 0.00078, P = 0.00078
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 324 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 383
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 384 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 437
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 438 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 491
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 492 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 547
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 548 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 601
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 602 DPSSALLELLD 612
>UNIPROTKB|E2QZD9 [details] [associations]
symbol:LONP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070407 "oxidation-dependent protein
catabolic process" evidence=IEA] [GO:0070362 "mitochondrial heavy
strand promoter anti-sense binding" evidence=IEA] [GO:0070361
"mitochondrial light strand promoter anti-sense binding"
evidence=IEA] [GO:0070182 "DNA polymerase binding" evidence=IEA]
[GO:0051880 "G-quadruplex DNA binding" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PROSITE:PS01046 SMART:SM00382 SMART:SM00464
GO:GO:0005524 GO:GO:0043565 GO:GO:0051260 GO:GO:0001666
GO:GO:0003727 GO:GO:0043531 GO:GO:0004252 GO:GO:0042645
GO:GO:0003697 GO:GO:0007005 InterPro:IPR015947 SUPFAM:SSF88697
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0051880 GO:GO:0004176 PANTHER:PTHR10046
GO:GO:0070361 GO:GO:0070407 TIGRFAMs:TIGR00763 KO:K08675 CTD:9361
GO:GO:0070362 RefSeq:XP_854391.1 Ensembl:ENSCAFT00000029820
GeneID:611425 KEGG:cfa:611425 NextBio:20896961 Uniprot:E2QZD9
Length = 960
Score = 125 (49.1 bits), Expect = 0.00078, P = 0.00078
Identities = 79/311 (25%), Positives = 139/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 325 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 384
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 385 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 438
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP +E L + VL +
Sbjct: 439 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYS-NENLDLARAQAVLEEDH 492
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 493 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 548
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P ++L DE++K +Q
Sbjct: 549 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LILIDEVDKIGRGYQG 602
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 603 DPSSALLELLD 613
>UNIPROTKB|F1SBU7 [details] [associations]
symbol:LOC100622930 "Lon protease homolog" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] InterPro:IPR003111 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004815 InterPro:IPR008268
InterPro:IPR008269 InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190
Pfam:PF05362 PROSITE:PS01046 SMART:SM00382 SMART:SM00464
GO:GO:0005524 GO:GO:0006508 GO:GO:0004252 InterPro:IPR015947
SUPFAM:SSF88697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0004176 PANTHER:PTHR10046
TIGRFAMs:TIGR00763 GeneTree:ENSGT00530000063553 OMA:TGSPEYA
EMBL:FP089464 Ensembl:ENSSSCT00000014773 Uniprot:F1SBU7
Length = 960
Score = 125 (49.1 bits), Expect = 0.00078, P = 0.00078
Identities = 80/311 (25%), Positives = 138/311 (44%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 324 VVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREV 383
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 384 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLKEL-----VVPKHVMDV 437
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS K G LL ++ ++ W T IP E L + VL +
Sbjct: 438 VDEELS---KLG--LLDNHSSEFNVTRNYLDWLTSIPWGKYSD-ENLDLARAQAVLEEDH 491
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K + + I S+ S + + F GP GVGKT + +++A L N E
Sbjct: 492 YGMEDVKKRILEFIAVSQLRGSTQGKILC---FYGPPGVGKTSIARSIARAL-NREYFRF 547
Query: 726 RID-MSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ- 779
+ M++ E R VGA PG + L + P +VL DE++K +Q
Sbjct: 548 SVGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LVLIDEVDKIGRGYQG 601
Query: 780 DVFNILLQLLD 790
D + LL+LLD
Sbjct: 602 DPSSALLELLD 612
>UNIPROTKB|Q8HYY4 [details] [associations]
symbol:UACA "Uveal autoantigen with coiled-coil domains and
ankyrin repeats protein" species:9913 "Bos taurus" [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 GO:GO:0005856 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:AY152693 IPI:IPI00717016 RefSeq:NP_776634.1 UniGene:Bt.26227
ProteinModelPortal:Q8HYY4 PRIDE:Q8HYY4 GeneID:281559
KEGG:bta:281559 CTD:55075 HOGENOM:HOG000147885 HOVERGEN:HBG066395
OrthoDB:EOG42RD6F NextBio:20805510 Uniprot:Q8HYY4
Length = 1401
Score = 116 (45.9 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 36/156 (23%), Positives = 83/156 (53%)
Query: 472 ITERFLPDKAIDLVDEAAA----KLKMEITSKPIELDEIDRAVLKLEME----KLSLKND 523
++ +++P K + + A + K E+ + ++I++ +K++ E K +L+N
Sbjct: 840 MSHQYVPVKTHEEIKTALSSTLDKTNRELVDVKKKCEDINQEFVKIKDENEILKRNLENT 899
Query: 524 TDKASKERLSKLEHD--LNSLKQKQKELNDQWSREKDLMSRIRSIKEEIDRVNLEMEAAE 581
++ E +S EH+ ++ L++ K++ D +++++ + +EEI ++ E+ A +
Sbjct: 900 QNQVKAEYISLREHEEKMSGLRKSMKKVQDN---SAEILAKYKKSQEEIVTLHEEIAAQK 956
Query: 582 RDYD-LNRAAELKYGTMISLQ---RQLEEAEKNLSE 613
R+ D + +LKY +ISL+ R+ + EK L E
Sbjct: 957 RELDTIQECIKLKYAPIISLEECERKFKATEKELKE 992
Score = 62 (26.9 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 35/159 (22%), Positives = 66/159 (41%)
Query: 820 ILETLQSVQDSKEAVYEVMKKQVVE-LARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEI 878
+L+ + KE + E KQ E LA QT L + +++ + ++S + K +
Sbjct: 1060 LLQKYTEAKKEKEKLVEENAKQTSEILAAQTL----LQK--QHVPLEQVES--LKKSLSG 1111
Query: 879 QMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGD 938
+ +K+ LK K+ ++ VT L + + + P+ +Q E V I+K
Sbjct: 1112 TIETLKEELKTKQRCYEKEQQTVTQLRQMLENQKNSSVPLAEHLQVKEAFEKEVGIIKAS 1171
Query: 939 IKXXXXXXXXXXXXPSAKDLPPRN-KLCIKKLESSSSID 976
++ S +N K +KKLE+ +D
Sbjct: 1172 LREKEEESQNKTEEVSKLQSEIQNTKQALKKLETREVVD 1210
Score = 48 (22.0 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 117 QQVVETEH-LMKALLEQKDG-LARRI--LTKAGQDNTKVLQ 153
Q V EH +K+ LEQK G L +RI LT Q K ++
Sbjct: 665 QHVKPEEHEQLKSRLEQKSGELGKRITELTSKNQTLQKEIE 705
>DICTYBASE|DDB_G0268156 [details] [associations]
symbol:DDB_G0268156 species:44689 "Dictyostelium
discoideum" [GO:0051085 "chaperone mediated protein folding
requiring cofactor" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR010448 dictyBase:DDB_G0268156
GO:GO:0005524 EMBL:AAFI02000003 GO:GO:0051085 PANTHER:PTHR10760
RefSeq:XP_647591.1 ProteinModelPortal:Q55FE2
EnsemblProtists:DDB0189814 GeneID:8616403 KEGG:ddi:DDB_G0268156
eggNOG:NOG129883 InParanoid:Q55FE2 OMA:ADISSNY Uniprot:Q55FE2
Length = 486
Score = 112 (44.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 42/178 (23%), Positives = 85/178 (47%)
Query: 765 PYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETL 824
PYSV++FDEI+K + +++ LD IT S + + T I TS +G++ +
Sbjct: 224 PYSVIVFDEIQKIDPYIISVIEPFLDGATITISDEKKTTTTK---INTS-LGTYILTSDF 279
Query: 825 QSV-QDSKEAVYEVMKKQVVELARQTFRP-EFLNRIDEYIVFQPLDSKEISK---IVEIQ 879
+++ E +K++ + + + +F + E + F PL SK SK I EI+
Sbjct: 280 DKEGMTYNQSILE-LKRKATAMFKSIYGDSKFSKLVTESLPFLPL-SKSNSKLQIIKEIE 337
Query: 880 MNRVKDR-LKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILK 936
+ ++ L I+L + + PN R +++++ L+ N+++ I++
Sbjct: 338 NSFCRENHLSILSIELKSQVSEIIFQKMNTLYPNENFRAIEKILNYLIFNKVSNFIIQ 395
Score = 56 (24.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 647 QQSEREKLVMLEEVLHKRVIGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGK 706
++ + E L ++ V QD A+K + I R P + +F G G+GK
Sbjct: 89 KKDKNELLKSFKQYFEGFVSFQDDAIKEIESIIYRKYL---HPDTKVVMHLF-GDHGIGK 144
Query: 707 TELGKALADFLFNTENAL 724
T K ++ LF + L
Sbjct: 145 TLSSKLVSRVLFENGSGL 162
>MGI|MGI:1921392 [details] [associations]
symbol:Lonp1 "lon peptidase 1, mitochondrial" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IBA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;IBA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=ISO;IDA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IBA] [GO:0005524 "ATP binding" evidence=ISO;IBA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005759
"mitochondrial matrix" evidence=ISO] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006508 "proteolysis" evidence=ISO;IDA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IBA] [GO:0007005 "mitochondrion
organization" evidence=ISO;IBA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0034599
"cellular response to oxidative stress" evidence=ISO;IBA]
[GO:0042645 "mitochondrial nucleoid" evidence=ISO;IBA] [GO:0043531
"ADP binding" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0043623 "cellular protein complex
assembly" evidence=ISO] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IBA] [GO:0051260 "protein
homooligomerization" evidence=ISO;IBA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=ISO]
[GO:0051880 "G-quadruplex DNA binding" evidence=ISO] [GO:0070182
"DNA polymerase binding" evidence=ISO] [GO:0070361 "mitochondrial
light strand promoter anti-sense binding" evidence=ISO;IDA]
[GO:0070362 "mitochondrial heavy strand promoter anti-sense
binding" evidence=ISO;IDA] [GO:0070363 "mitochondrial light strand
promoter sense binding" evidence=IDA] [GO:0070364 "mitochondrial
heavy strand promoter sense binding" evidence=IDA] [GO:0070407
"oxidation-dependent protein catabolic process" evidence=ISO;IBA]
InterPro:IPR003111 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004815 InterPro:IPR008268 InterPro:IPR008269
InterPro:IPR027065 Pfam:PF00004 Pfam:PF02190 Pfam:PF05362
PIRSF:PIRSF001174 PROSITE:PS01046 SMART:SM00382 SMART:SM00464
MGI:MGI:1921392 GO:GO:0005524 GO:GO:0034599 GO:GO:0043565
GO:GO:0051260 GO:GO:0001666 GO:GO:0003727 GO:GO:0043531
GO:GO:0004252 GO:GO:0042645 GO:GO:0003697 GO:GO:0006515
GO:GO:0007005 InterPro:IPR015947 SUPFAM:SSF88697 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0051131
GO:GO:0051880 GO:GO:0004176 PANTHER:PTHR10046 MEROPS:S16.002
eggNOG:COG0466 GO:GO:0070361 GO:GO:0070407 HAMAP:MF_03120
TIGRFAMs:TIGR00763 HOGENOM:HOG000261409 KO:K08675 HSSP:P0A9M0
CTD:9361 GeneTree:ENSGT00530000063553 HOVERGEN:HBG000798
OMA:TGSPEYA ChiTaRS:LONP1 EMBL:AY190302 EMBL:AK004820 EMBL:AK157474
EMBL:AK159302 EMBL:AK160071 EMBL:AK161983 IPI:IPI00761408
RefSeq:NP_083058.2 UniGene:Mm.329136 ProteinModelPortal:Q8CGK3
SMR:Q8CGK3 IntAct:Q8CGK3 STRING:Q8CGK3 REPRODUCTION-2DPAGE:Q8CGK3
REPRODUCTION-2DPAGE:Q9DBP9 PaxDb:Q8CGK3 PRIDE:Q8CGK3 DNASU:74142
Ensembl:ENSMUST00000047226 GeneID:74142 KEGG:mmu:74142
UCSC:uc008dcp.1 NextBio:339886 Bgee:Q8CGK3 CleanEx:MM_LONP1
Genevestigator:Q8CGK3 GermOnline:ENSMUSG00000041168 Uniprot:Q8CGK3
Length = 949
Score = 124 (48.7 bits), Expect = 0.00099, P = 0.00098
Identities = 78/310 (25%), Positives = 136/310 (43%)
Query: 496 ITSKPIELDEIDRAVLKLEMEKLS-LKNDTD--KASKERLS--KLEHDLNSLKQKQ-KEL 549
+ PI L ++ A+ E +L + +T+ K + LS K E +L+ L+Q+ +E+
Sbjct: 313 VVDNPIYLSDMGAALTGAESHELQDVLEETNILKRLYKALSLLKKEFELSKLQQRLGREV 372
Query: 550 ND---QWSREKDLMSRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTMISLQRQLEE 606
+ Q R+ L +++ IK+E+ + +A E + R EL + + ++
Sbjct: 373 EEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFR-ERLREL-----VVPKHVMDV 426
Query: 607 AEKNLSEFQKSGHSLLREEVTDLDIAEIVSKW-TGIPLSSLQQSEREKLVMLEEVLHKRV 665
++ LS+ +LL ++ ++ W T IP Q E L + VL +
Sbjct: 427 VDEELSKL-----ALLDNHSSEFNVTRNYLDWLTSIPWGR-QSDENLDLARAQAVLEEDH 480
Query: 666 IGQDIAVKSVADAIRRSRAGLSDPARPIASFMFMGPTGVGKTELGKALADFLFNTENALV 725
G + K V + I S+ S + + F GP GVGKT + +++A L
Sbjct: 481 YGMEDVKKRVLEFIAVSQLRGSTQGKILC---FHGPPGVGKTSIARSIARALGREYFRFS 537
Query: 726 RIDMSEYMEKHSVSRL-VGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEK---AHQ-D 780
M++ E R VGA PG + L + P +VL DE++K +Q D
Sbjct: 538 VGGMTDVAEIKGHRRTYVGAMPGKIIQ----CLKKTKTENP--LVLIDEVDKIGRGYQGD 591
Query: 781 VFNILLQLLD 790
+ LL+LLD
Sbjct: 592 PSSALLELLD 601
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 982 957 0.00095 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 125
No. of states in DFA: 612 (65 KB)
Total size of DFA: 365 KB (2181 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 107.90u 0.21s 108.11t Elapsed: 00:00:07
Total cpu time: 107.96u 0.21s 108.17t Elapsed: 00:00:07
Start: Fri May 10 04:30:47 2013 End: Fri May 10 04:30:54 2013
WARNINGS ISSUED: 1