Query 002015
Match_columns 981
No_of_seqs 426 out of 3079
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 14:35:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002015.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002015hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09800 putative hypoxanthine 100.0 1E-173 3E-178 1601.8 83.7 836 12-954 1-955 (956)
2 TIGR03313 Se_sel_red_Mo probab 100.0 7E-171 2E-175 1579.8 81.4 830 16-954 1-951 (951)
3 PLN00192 aldehyde oxidase 100.0 1E-168 3E-173 1607.0 90.6 759 146-964 580-1341(1344)
4 TIGR02969 mam_aldehyde_ox alde 100.0 2E-167 5E-172 1594.5 86.1 731 145-960 576-1315(1330)
5 TIGR03311 Se_dep_Molyb_1 selen 100.0 9E-165 2E-169 1517.2 74.5 774 14-949 1-847 (848)
6 PLN02906 xanthine dehydrogenas 100.0 3E-163 6E-168 1558.8 85.7 729 145-955 565-1312(1319)
7 TIGR02965 xanthine_xdhB xanthi 100.0 6E-158 1E-162 1449.5 75.6 731 146-954 2-756 (758)
8 TIGR02416 CO_dehy_Mo_lg carbon 100.0 6E-154 1E-158 1416.0 75.5 706 153-950 1-769 (770)
9 KOG0430 Xanthine dehydrogenase 100.0 3E-153 7E-158 1354.9 72.7 721 146-959 529-1254(1257)
10 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 9E-153 2E-157 1399.6 73.5 708 150-952 2-746 (746)
11 PRK09970 xanthine dehydrogenas 100.0 2E-152 4E-157 1403.1 74.9 727 145-954 3-755 (759)
12 TIGR03196 pucD xanthine dehydr 100.0 1E-149 2E-154 1374.8 72.6 730 144-949 2-768 (768)
13 COG4631 XdhB Xanthine dehydrog 100.0 8E-136 2E-140 1118.2 53.5 729 146-953 20-772 (781)
14 COG1529 CoxL Aerobic-type carb 100.0 4E-124 9E-129 1143.1 67.2 720 144-953 5-730 (731)
15 PF02738 Ald_Xan_dh_C2: Molybd 100.0 3E-109 6E-114 992.7 47.7 520 294-875 17-547 (547)
16 PF01315 Ald_Xan_dh_C: Aldehyd 100.0 7.4E-29 1.6E-33 235.1 7.1 107 159-269 1-110 (111)
17 TIGR03193 4hydroxCoAred 4-hydr 99.9 5.6E-25 1.2E-29 214.8 9.2 87 14-101 2-148 (148)
18 COG2080 CoxS Aerobic-type carb 99.9 1.4E-24 2.9E-29 211.5 6.9 91 12-103 2-153 (156)
19 PRK09908 xanthine dehydrogenas 99.9 7.4E-24 1.6E-28 209.0 9.7 89 10-100 5-155 (159)
20 TIGR03198 pucE xanthine dehydr 99.9 1.1E-23 2.4E-28 207.5 9.3 89 13-102 3-150 (151)
21 PRK11433 aldehyde oxidoreducta 99.9 1.2E-22 2.5E-27 209.9 9.5 91 12-103 50-215 (217)
22 TIGR02963 xanthine_xdhA xanthi 99.8 4.3E-20 9.4E-25 215.9 7.6 88 14-101 1-158 (467)
23 COG4630 XdhA Xanthine dehydrog 99.8 9.9E-20 2.1E-24 196.0 7.3 92 11-102 6-167 (493)
24 COG1529 CoxL Aerobic-type carb 99.5 3.2E-15 7E-20 184.5 1.9 468 147-687 188-713 (731)
25 PF01799 Fer2_2: [2Fe-2S] bind 99.2 7.2E-12 1.6E-16 109.5 0.8 36 63-98 28-74 (75)
26 PRK12386 fumarate reductase ir 92.2 0.12 2.7E-06 56.3 3.7 40 21-62 20-73 (251)
27 PF13510 Fer2_4: 2Fe-2S iron-s 91.7 0.31 6.7E-06 43.8 5.1 53 12-68 2-75 (82)
28 PRK09970 xanthine dehydrogenas 87.3 5.5 0.00012 50.7 13.2 60 325-384 457-528 (759)
29 COG2104 ThiS Sulfur transfer p 83.1 2 4.4E-05 37.3 4.5 44 12-61 1-45 (68)
30 PRK06083 sulfur carrier protei 82.2 2.6 5.6E-05 38.2 5.1 49 6-60 11-60 (84)
31 PF00111 Fer2: 2Fe-2S iron-sul 81.5 1.2 2.6E-05 39.1 2.7 34 16-51 1-35 (78)
32 TIGR02416 CO_dehy_Mo_lg carbon 81.2 3.1 6.6E-05 53.0 7.1 70 329-400 476-556 (770)
33 TIGR02965 xanthine_xdhB xanthi 78.6 3.1 6.7E-05 52.9 6.0 59 326-384 445-514 (758)
34 PRK08364 sulfur carrier protei 77.5 4.2 9E-05 35.4 4.7 45 13-61 4-51 (70)
35 PRK07440 hypothetical protein; 77.4 4.5 9.8E-05 35.2 4.9 42 13-60 4-46 (70)
36 TIGR03313 Se_sel_red_Mo probab 77.4 4.3 9.4E-05 52.7 6.8 59 326-384 658-727 (951)
37 cd00207 fer2 2Fe-2S iron-sulfu 77.1 2 4.2E-05 38.1 2.6 35 14-51 1-35 (84)
38 PRK09800 putative hypoxanthine 77.1 5.9 0.00013 51.5 7.9 59 326-384 662-731 (956)
39 TIGR03194 4hydrxCoA_A 4-hydrox 75.9 4.7 0.0001 51.2 6.5 73 326-400 442-525 (746)
40 PRK05863 sulfur carrier protei 74.7 5.2 0.00011 34.2 4.5 41 14-60 1-42 (65)
41 PRK08053 sulfur carrier protei 70.7 7 0.00015 33.5 4.4 41 14-60 1-42 (66)
42 PRK05950 sdhB succinate dehydr 69.9 4.2 9.2E-05 44.0 3.6 41 21-62 18-72 (232)
43 PRK06944 sulfur carrier protei 69.3 6.7 0.00015 33.2 4.0 40 14-60 1-41 (65)
44 TIGR01683 thiS thiamine biosyn 68.5 6.8 0.00015 33.3 3.8 39 16-60 1-40 (64)
45 PF02738 Ald_Xan_dh_C2: Molybd 68.0 16 0.00035 44.7 8.4 73 594-685 49-122 (547)
46 cd00565 ThiS ThiaminS ubiquiti 67.9 7.2 0.00016 33.2 3.9 41 15-61 1-42 (65)
47 TIGR03311 Se_dep_Molyb_1 selen 67.8 8.8 0.00019 49.4 6.3 71 328-401 594-675 (848)
48 TIGR02969 mam_aldehyde_ox alde 66.6 8.8 0.00019 51.8 6.2 89 13-101 2-161 (1330)
49 PLN02906 xanthine dehydrogenas 65.6 13 0.00028 50.2 7.5 59 326-384 1010-1079(1319)
50 TIGR03196 pucD xanthine dehydr 64.5 12 0.00026 47.8 6.5 71 595-684 184-254 (768)
51 PRK05659 sulfur carrier protei 63.9 8.1 0.00018 32.9 3.4 41 14-60 1-42 (66)
52 PRK06437 hypothetical protein; 62.5 11 0.00024 32.5 4.0 42 15-60 4-47 (67)
53 PRK07696 sulfur carrier protei 62.4 12 0.00027 32.2 4.3 42 14-61 1-44 (67)
54 PRK08493 NADH dehydrogenase su 61.6 15 0.00032 47.1 6.5 52 14-69 2-69 (819)
55 PRK12814 putative NADPH-depend 60.6 17 0.00036 45.6 6.8 53 13-69 3-73 (652)
56 PF02594 DUF167: Uncharacteris 58.4 29 0.00062 31.0 6.0 53 597-657 17-69 (77)
57 PRK06488 sulfur carrier protei 56.4 16 0.00035 31.0 4.0 40 14-60 1-41 (65)
58 PRK12576 succinate dehydrogena 55.3 12 0.00026 41.7 3.8 41 21-62 25-78 (279)
59 PRK12385 fumarate reductase ir 55.3 9.4 0.0002 41.7 2.9 41 21-62 25-78 (244)
60 TIGR00384 dhsB succinate dehyd 53.4 9.8 0.00021 40.8 2.7 41 21-62 15-68 (220)
61 PTZ00305 NADH:ubiquinone oxido 48.3 42 0.0009 37.5 6.5 55 12-69 67-139 (297)
62 PLN00192 aldehyde oxidase 47.0 29 0.00062 47.1 6.0 100 10-109 2-184 (1344)
63 PRK07569 bidirectional hydroge 43.2 52 0.0011 35.6 6.3 53 13-69 3-73 (234)
64 PRK09129 NADH dehydrogenase su 41.4 47 0.001 42.5 6.6 52 14-69 2-71 (776)
65 PF02594 DUF167: Uncharacteris 34.2 90 0.0019 27.8 5.2 43 330-372 17-64 (77)
66 CHL00134 petF ferredoxin; Vali 33.1 67 0.0014 29.9 4.5 36 13-51 5-42 (99)
67 PRK00647 hypothetical protein; 32.4 90 0.0019 29.1 5.0 44 605-656 26-69 (96)
68 PRK11840 bifunctional sulfur c 32.2 54 0.0012 37.2 4.3 42 14-61 1-43 (326)
69 PRK10713 2Fe-2S ferredoxin Yfa 32.0 96 0.0021 27.9 5.2 35 13-51 3-37 (84)
70 TIGR02008 fdx_plant ferredoxin 31.7 84 0.0018 29.0 4.9 36 13-51 4-40 (97)
71 TIGR01973 NuoG NADH-quinone ox 30.5 54 0.0012 40.7 4.4 50 16-69 1-69 (603)
72 PRK09130 NADH dehydrogenase su 27.7 86 0.0019 39.6 5.5 52 14-69 2-72 (687)
73 PRK05090 hypothetical protein; 27.5 1.2E+02 0.0027 28.2 5.1 45 604-656 30-74 (95)
74 PRK08640 sdhB succinate dehydr 27.2 87 0.0019 34.3 4.8 41 21-62 23-83 (249)
75 PF14453 ThiS-like: ThiS-like 25.2 1.1E+02 0.0024 25.7 3.9 39 14-61 1-41 (57)
76 PRK01530 hypothetical protein; 25.0 1.4E+02 0.0029 28.4 4.9 44 605-656 38-81 (105)
77 PRK01530 hypothetical protein; 25.0 1.2E+02 0.0027 28.7 4.7 38 335-372 35-77 (105)
78 PRK11872 antC anthranilate dio 23.7 84 0.0018 35.9 4.1 35 14-51 3-40 (340)
79 PF13085 Fer2_3: 2Fe-2S iron-s 23.6 64 0.0014 30.8 2.6 41 21-62 19-72 (110)
80 PRK01964 4-oxalocrotonate taut 22.0 75 0.0016 26.7 2.5 31 352-382 23-56 (64)
81 PF08529 NusA_N: NusA N-termin 21.9 1.2E+02 0.0026 29.4 4.1 23 799-821 42-64 (122)
82 PF06971 Put_DNA-bind_N: Putat 21.7 71 0.0015 26.1 2.1 17 508-524 32-48 (50)
83 COG3383 Uncharacterized anaero 21.2 1.7E+02 0.0036 36.9 5.9 55 11-69 3-73 (978)
84 PLN03136 Ferredoxin; Provision 20.7 1.2E+02 0.0026 30.5 4.0 36 13-51 56-91 (148)
No 1
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=1.4e-173 Score=1601.81 Aligned_cols=836 Identities=21% Similarity=0.282 Sum_probs=688.2
Q ss_pred eEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcC-c---------EeeecccccCC-------------------
Q 002015 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLG-C---------VLVDAEKTHRP------------------- 62 (981)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~g-C---------vl~dg~~~~~~------------------- 62 (981)
|+|+|+|||+.+++ +++|+++|+++||+ |||||+|.| | |||||+++++|
T Consensus 1 ~~i~~~vNg~~~~~-~~~~~~~l~~~LR~-~~~~~~k~g~c~~g~CGaCtv~~dg~~v~sC~~~~~~~~g~~i~Tvegl~ 78 (956)
T PRK09800 1 MIIHFTLNGAPQEL-TVNPGENVQKLLFN-MGMHSVRNSDDGFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLG 78 (956)
T ss_pred CeEEEEECCEEEEE-ecCCCCCHHHHHHH-CCCCccccCCCCcccCCCCEEEECCeEEeHHHHHHHHcCCCEEEecCCcC
Confidence 45899999999999 79999999999999 999999998 6 99999998753
Q ss_pred ---------------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHhhcccccccc
Q 002015 63 ---------------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 110 (981)
Q Consensus 63 ---------------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~~~~~~~~~~ 110 (981)
.|||||+ +|+++||+++|+|||||||||++|++||+.+++....+. .
T Consensus 79 ~~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~~~~p~~~~i~~~l~gnlCRCtgy~~i~~av~~~~~~~~~~~-~ 157 (956)
T PRK09800 79 KWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQ-A 157 (956)
T ss_pred CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCCCHHHHHHHHhhchhccCCcHHHHHHHHHHHHhhcccc-c
Confidence 2688883 799999999999999999999999999998876543210 0
Q ss_pred ccccCCCCchhhhhhhcccccccccccccccccCccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEE
Q 002015 111 DRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIR 190 (981)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~ 190 (981)
.|- .+. ++++- -...|++++|.|+..|+||+++|++|+. +|||||++++|||++||||+
T Consensus 158 --~~~------------~~~----~~~~~--~~~VGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahArI~ 216 (956)
T PRK09800 158 --TID------------IAP----TFRDD--LEVIGKHYPKTDAAKMVQAKPCYVEDRV-TADACVIKMLRSPHAHALIT 216 (956)
T ss_pred --ccc------------ccc----ccccc--cccCCCCCCCcChHhhCcccccccccCC-CCCCEEEEEeecCCCcEEEe
Confidence 000 000 00000 1136999999999999999999999996 78999999999999999999
Q ss_pred eEecCCCC-CCCEEEEEEccCCCcC-----CCCcccCCCCCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEE
Q 002015 191 SVEIKSKS-LPGVSAFLSYKDIPEA-----GQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDY 264 (981)
Q Consensus 191 sID~s~A~-~pGVv~V~T~~D~p~~-----g~~~~~~~~~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey 264 (981)
+||+|+|+ ||||++|+|++|+|.. +..++ ....+.++|++++|||+|||||+|||+|+++|++|+++|+|||
T Consensus 217 sID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~~~~~--~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Vey 294 (956)
T PRK09800 217 HLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAP--EPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEY 294 (956)
T ss_pred eeEHHHHHhCCCeEEEEcHHHCCcccccccCcCCC--CCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEE
Confidence 99999999 9999999999999831 11111 0112344567999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCHHHHhcCCCC--ccc------------------------------------CCcc---cccccCChhhh
Q 002015 265 DVGNLEPPILSVEEAVGRSSF--FEV------------------------------------PSFL---YPKSVGDISKG 303 (981)
Q Consensus 265 ~~e~l~p~v~d~~~Al~~~a~--~~~------------------------------------~~~~---~~~~~Gdve~a 303 (981)
|+| |+++|+++|++++++ |+. ++|+ .....||++++
T Consensus 295 --e~L-p~v~d~~~Al~~~a~~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~a 371 (956)
T PRK09800 295 --EVL-KPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKG 371 (956)
T ss_pred --EeC-CccCCHHHHhcCCCceecccccccccccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHH
Confidence 899 999999999998875 321 2343 13468999999
Q ss_pred cccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCCC
Q 002015 304 MNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKA 383 (981)
Q Consensus 304 f~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K~ 383 (981)
|++|+++ ||++|++++++|++|||++|+|+||+ ++|+||+|||+||.+|+.||++||||++||||+.+++|||||+|.
T Consensus 372 f~~a~~v-ve~~y~~~~~~H~~mEp~~aiA~~d~-~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~ 449 (956)
T PRK09800 372 FADADVI-IERTYNSTQAQQCPTETHICFTRMDG-DRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQ 449 (956)
T ss_pred HhhCCEE-EEEEEEeCCcccccCCCceEEEEEeC-CeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCcc
Confidence 9999996 99999999999999999999999985 589999999999999999999999999999999999999999998
Q ss_pred cccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCCchh-Hhh
Q 002015 384 IKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNIP-AYM 462 (981)
Q Consensus 384 ~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~-~~~ 462 (981)
.. ..+..+|++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+. ...
T Consensus 450 ~~--~~e~~aA~aA~~~grPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~ 527 (956)
T PRK09800 450 DI--LLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGP 527 (956)
T ss_pred cc--cHHHHHHHHHHHhCCCEEEEeeHHHHhhCcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHH
Confidence 52 345668999999999999999999999999999999999999999999999999999999999987665333 333
Q ss_pred hccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccc------
Q 002015 463 IGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFY------ 536 (981)
Q Consensus 463 ~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~------ 536 (981)
....++|+|||++++.+.|+||++|+|+|||||.||+.||+|++||++|++|||||+|||+||++++++....+
T Consensus 528 ~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g 607 (956)
T PRK09800 528 ALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEG 607 (956)
T ss_pred hhcCcCcccceEEEEEEEEECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccc
Confidence 44568999999999999999999999999999999999999999999999999999999999999887642100
Q ss_pred cCCCCCc-c-cCCHHHHHHHHHHhcCChhhHHHHHHhhhcCCcc-eeecccccEEeecC-CCCceEEEEEeeCCcEEEEe
Q 002015 537 ESSAGEL-E-EYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWR-KKGISRVPIVYDVP-LMSTPGKVSILSDGSVVVEV 612 (981)
Q Consensus 537 ~~~~g~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-grGig~a~~~~~~~-~~~~~a~v~l~~DG~v~v~~ 612 (981)
..+.+.+ + +..+.+||++++++++|+++++ ..++|+ |+|+++++...+.+ ...+.+.|+|++||+|+|++
T Consensus 608 ~~~~~~~~~~s~~~~~~L~~~~e~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~~~~~~a~v~l~~dGsv~v~~ 681 (956)
T PRK09800 608 KAPTSVPSAASCALEEILRQGREMIQWSSPKP------QNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHS 681 (956)
T ss_pred cccccCccccCCCHHHHHHHHHHhcCcchhhh------hcCCCeeEEEEEEEEEcccCCCCCCceEEEEECCCceEEEEE
Confidence 0011222 2 3489999999999999986432 124443 55555433222322 23578999999999999999
Q ss_pred cccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 002015 613 GGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLR 692 (981)
Q Consensus 613 g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~a 692 (981)
|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+.++
T Consensus 682 g~~e~GqG~~T~~~QiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~a 753 (956)
T PRK09800 682 GGADIGTGLDTVVTKLAAEVLHC--------PPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHG 753 (956)
T ss_pred CCCCCCccHHHHHHHHHHHHHCC--------CceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhh
Q 002015 693 ERLQAQMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSL 772 (981)
Q Consensus 693 a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 (981)
+++++... ..+.+...+.+..... ..+|...+.. ... ..+...+
T Consensus 754 a~~l~~~~-------------~~~~~~~~g~~~~~~~---~~~~~~~~~~-------------------~~~-~~~~~~l 797 (956)
T PRK09800 754 AQMLGEPV-------------ADVQLATPGVVRGKKG---EVSFGDIAHK-------------------GET-GTGFGSL 797 (956)
T ss_pred HHHhCCCH-------------HHEEEecCCEEeCCCC---cccHHHHHHH-------------------Hhc-CCCCCCe
Confidence 98875311 1122221111111000 0111100000 000 0000000
Q ss_pred hhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhccccee
Q 002015 773 NLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPT 852 (981)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~y 852 (981)
.....+. .....|+|+||++|||||++||+|||+||++++|||++|||.+++||||||++||||+||+|++.|
T Consensus 798 ~~~~~~~-------~~~~~~~~~a~~aeVeVD~~TG~vkvl~~~~~~D~G~vINP~~v~gQieGgi~qGiG~AL~Ee~~~ 870 (956)
T PRK09800 798 VGTGSYI-------TPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIY 870 (956)
T ss_pred EEEEEec-------CCCCCcceEEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 0000000 011258899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCC
Q 002015 853 NSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQ 932 (981)
Q Consensus 853 d~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g 932 (981)
|++|++++.||++|++|++.|+|++|+++++|++ +|.+|||+||+||+++++ +++||+|||+||+|
T Consensus 871 d~~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~~-~~~~p~GaKgvGE~~~~~---~a~AIanAI~~A~G---------- 936 (956)
T PRK09800 871 DAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSD-DKVGPFGAKSISEIGVNG---AAPAIATAIHDACG---------- 936 (956)
T ss_pred CCCCcCCCCCcccCCCCChhhCCCceEEEEEcCC-CCCCCCCCcccCCCcccc---hHHHHHHHHHHHhC----------
Confidence 9889999999999999999999944999999976 688999999999999988 77899999999996
Q ss_pred CCcccccCCCCCHHHHHHhcCC
Q 002015 933 SDLTFDLEVPATVQVVKELCGP 954 (981)
Q Consensus 933 ~~~~~~~~lP~Tpe~v~~al~~ 954 (981)
++++++|+|||+||++|++
T Consensus 937 ---~r~~~lP~tpe~vl~al~~ 955 (956)
T PRK09800 937 ---IWLREWHFTPEKILTALEK 955 (956)
T ss_pred ---cCcccCCCCHHHHHHHHhh
Confidence 5779999999999999864
No 2
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=7e-171 Score=1579.80 Aligned_cols=830 Identities=22% Similarity=0.302 Sum_probs=683.1
Q ss_pred EEECCEEEEeccCCCCCchHHHHhcCCCCcCCCc-Cc---------EeeecccccCC-----------------------
Q 002015 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL-GC---------VLVDAEKTHRP----------------------- 62 (981)
Q Consensus 16 ~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~-gC---------vl~dg~~~~~~----------------------- 62 (981)
|+|||+.+++ +++|+++|+++||+. +|||+|. || |||||+++++|
T Consensus 1 ~~~Ng~~~~~-~~~~~~~l~~~LR~~-~l~~~k~~~c~~g~CGaCtv~~dg~~v~sC~~~~~~~~g~~i~Tiegl~~~~~ 78 (951)
T TIGR03313 1 FTLNGAPQTL-ECKLGENVQTLLFNM-GMHSVRNSDDGFGFAGSDAILFNGVLKNASLLIAAQLEGAEVRTAESLGQWNQ 78 (951)
T ss_pred CEECCEEEEE-ecCCCCCHHHHHHHC-CCCCCcCCCCCcccCCCCEEEECCeEeeHHHHHHHHcCCCEEEecCcCCCCCC
Confidence 6899999999 799999999999996 9999999 68 99999998753
Q ss_pred -----------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHhhcccccccccccc
Q 002015 63 -----------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLGDRLC 114 (981)
Q Consensus 63 -----------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~~~~~~~~~~~~~~ 114 (981)
.|||||+ +|+++||+++|+|||||||||++|++||+.+++....+. .
T Consensus 79 ~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~~~~p~~~~i~~~l~gnlcrctgy~~i~~av~~~~~~~~~~~-~---- 153 (951)
T TIGR03313 79 LSLVQQAMVDVGVVQSGYNDPAAALILTDLLDRNTQPNRAEIDDALSGLFSRDAGYQQFYQVIELAVKRLKDPE-H---- 153 (951)
T ss_pred CCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCCCHHHHHHHHhcceeccCCcHHHHHHHHHHHHhccccc-c----
Confidence 2688883 799999999999999999999999999998865432200 0
Q ss_pred CCCCchhhhhhhcccccccccccccccccCccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEec
Q 002015 115 GYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI 194 (981)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~ 194 (981)
+.+. + ..+-+. -..+|++++|.|+..|+||+++|++|+. +|||||++++|||++||||+|||+
T Consensus 154 --------~~~~--~--~~~~~~----~~~iGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~v~rSP~ahArI~sID~ 216 (951)
T TIGR03313 154 --------KQSI--A--PEFRDD----LTIIGKNCPKIDAAKMVQAKPCYVEDRV-PADACVIKMLRSPHPHAWITHLDV 216 (951)
T ss_pred --------cccc--c--Cccccc----cccCCCCCcCcChHhhCccCccccccCC-CCCCEEEEEEecCCCcEEEEeeEH
Confidence 0000 0 000000 1136999999999999999999999996 789999999999999999999999
Q ss_pred CCCC-CCCEEEEEEccCCCcC-----CCCcccCCCCCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCC
Q 002015 195 KSKS-LPGVSAFLSYKDIPEA-----GQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGN 268 (981)
Q Consensus 195 s~A~-~pGVv~V~T~~D~p~~-----g~~~~~~~~~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~ 268 (981)
|+|+ ||||++|+|.+|+|.. +..++. ...++++|++++|||+|||||+|||+|+|+|++|+++|+||| |+
T Consensus 217 s~A~a~pGV~~Vvt~~D~p~~~~~~~~~~~~~--~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Vey--e~ 292 (951)
T TIGR03313 217 SKAEALPGVVHVITHLNCPDIYYTPGGQSAPE--PSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEY--DV 292 (951)
T ss_pred HHHHhCCCeEEEEeHHHCCccccCCCCccCCC--CCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEE--Ee
Confidence 9999 9999999999999831 111110 112344578999999999999999999999999999999999 88
Q ss_pred CCCCCCCHHHHhcCCCC--ccc------------------------------------CCccc---ccccCChhhhcccC
Q 002015 269 LEPPILSVEEAVGRSSF--FEV------------------------------------PSFLY---PKSVGDISKGMNEA 307 (981)
Q Consensus 269 l~p~v~d~~~Al~~~a~--~~~------------------------------------~~~~~---~~~~Gdve~af~~A 307 (981)
| |+++|+++|++++++ |+. ++|+. ....||++++|++|
T Consensus 293 L-p~v~d~~~Al~~~ap~ih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~A 371 (951)
T TIGR03313 293 L-TPVMSIDEAMAAEAPIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFAEA 371 (951)
T ss_pred C-CccCCHHHHhcCCCCeeccccccccccccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHHhcC
Confidence 9 999999999998885 321 12331 24779999999999
Q ss_pred CeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCCCcccc
Q 002015 308 DHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAM 387 (981)
Q Consensus 308 ~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~ 387 (981)
+++ ||++|++++++|++|||++|+|+||+ ++|+||+|||+|+.+|..||++||||++||||+.+++|||||+|...
T Consensus 372 ~~v-ve~~y~~~~~~H~~mEp~~aiA~~d~-~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~-- 447 (951)
T TIGR03313 372 DVI-IERTYESTQAQQCPTETHICFTYMDG-ERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDI-- 447 (951)
T ss_pred CEE-EEEEEEECCEeeecCCCceEEEEEcC-CeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCcccc--
Confidence 996 99999999999999999999999984 58999999999999999999999999999999999999999999752
Q ss_pred hHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCCchhH-hhhccC
Q 002015 388 PVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNIPA-YMIGAL 466 (981)
Q Consensus 388 ~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~-~~~~~~ 466 (981)
..+..||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+.. ......
T Consensus 448 ~~e~~aA~aA~~~GrPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~ 527 (951)
T TIGR03313 448 LLEEVCAWATWVTGRPVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSL 527 (951)
T ss_pred cHHHHHHHHHHHhCCCEEEEeeHHHHhhccCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcC
Confidence 3445689999999999999999999999999999999999999999999999999999999999876553332 223345
Q ss_pred CCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccc------cCCC
Q 002015 467 KKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFY------ESSA 540 (981)
Q Consensus 467 g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~------~~~~ 540 (981)
++|+|||++++.+.|+||++|+|+|||||.||+.|++|++||++|++|||||+|||+||++++++..... ..+.
T Consensus 528 ~~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~ 607 (951)
T TIGR03313 528 PLYPCDNVDFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPT 607 (951)
T ss_pred cCccCCeEEEEEEEEECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999887642100 0011
Q ss_pred CCc-c-cCCHHHHHHHHHHhcCChhhHHHHHHhhhcCCcc-eeecccccEEeecCC---CCceEEEEEeeCCcEEEEecc
Q 002015 541 GEL-E-EYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWR-KKGISRVPIVYDVPL---MSTPGKVSILSDGSVVVEVGG 614 (981)
Q Consensus 541 g~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-grGig~a~~~~~~~~---~~~~a~v~l~~DG~v~v~~g~ 614 (981)
+.. + +.++.+||++++++++|+++++ ..++|+ |+|+++ ..+..+. ..+.+.|+|++||+|+|++|+
T Consensus 608 ~~~~~~s~~~~~~l~~~~~~~~w~~~~~------~~g~~~~G~Gia~--~~~~~g~~~~~~~~a~v~l~~dG~v~v~~g~ 679 (951)
T TIGR03313 608 SVPKAASCALEEILRQGRELIEWDSPKQ------AKGDWKIGRGVAI--IMQKSGIPDIDQANCMIKLESDGTFIVHSGG 679 (951)
T ss_pred cccccCCCcHHHHHHHHHHhcCccchhh------hccCceeeeEEEE--EEecccCCCCCCccEEEEEcCCceEEEEECC
Confidence 111 2 2389999999999999987542 124443 455544 4443332 257899999999999999999
Q ss_pred cccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 002015 615 IELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRER 694 (981)
Q Consensus 615 ~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~ 694 (981)
+|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+.+|++
T Consensus 680 ~e~GqG~~T~~~QiaAe~LGv--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~ 751 (951)
T TIGR03313 680 ADIGTGLDTVVSKLTAEVLHC--------PMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAE 751 (951)
T ss_pred CCCCccHHHHHHHHHHHHHCC--------CHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999999999999999999999999999999999988
Q ss_pred HhhccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhhh
Q 002015 695 LQAQMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNL 774 (981)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (981)
+++... ..+.+...+.+..... ..+|...+... .. ..+...+..
T Consensus 752 ~l~~~~-------------~~~~~~~~g~~~~~~~---~~~~~~~~~~~-------------------~~-~~~~~~~~~ 795 (951)
T TIGR03313 752 MLGEPV-------------ADVDLAAPGLVRGKTG---EVSYFDIAHKA-------------------ET-GTGFGQLVG 795 (951)
T ss_pred HhCCCH-------------HHEEEecCCEEeCCCC---cccHHHHHHHH-------------------hc-cCCCCCeEE
Confidence 875311 1122221111111000 00111000000 00 000000000
Q ss_pred hhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeCC
Q 002015 775 IYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNS 854 (981)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~ 854 (981)
...+ ......|+|+||++|||||++||+|||+||++++|||++|||++++||||||++||||+||+|++.||+
T Consensus 796 ~~~~-------~~~~~~~~~~a~~aeVeVD~~TG~vkv~r~~~~~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~ 868 (951)
T TIGR03313 796 TGSY-------ITSEFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDD 868 (951)
T ss_pred EEEe-------cCCCCCccceeEEEEEEEECCCCcEEEEEEEEEEECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECC
Confidence 0000 001136889999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCC
Q 002015 855 DGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQSD 934 (981)
Q Consensus 855 ~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~ 934 (981)
+|+++|.||+||++|++.|+|++|+++++|++ ++.+|||+||+||+++++ +++||+|||+||+|
T Consensus 869 ~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~~-~~~~p~GaKGiGE~~~~~---~apAIanAI~dA~G------------ 932 (951)
T TIGR03313 869 NGIPLTRDLKSYGAPKIGDIPRDFRAVLVPSD-DKVGPYGAKSISEIGVNG---AAPAIATAIHDACG------------ 932 (951)
T ss_pred CCcCCCCChhhCCCCChHhCCCceEEEEEcCC-CCCCCCCCcccCCCcccc---hHHHHHHHHHHHhC------------
Confidence 99999999999999999999933999999976 688999999999999988 77899999999996
Q ss_pred cccccCCCCCHHHHHHhcCC
Q 002015 935 LTFDLEVPATVQVVKELCGP 954 (981)
Q Consensus 935 ~~~~~~lP~Tpe~v~~al~~ 954 (981)
+++++||+|||+||++|++
T Consensus 933 -~r~~~lP~tPe~vl~al~~ 951 (951)
T TIGR03313 933 -VWLRDWHFTPEKILKGLNK 951 (951)
T ss_pred -cccccCCCCHHHHHHHhhC
Confidence 6789999999999999853
No 3
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=1.3e-168 Score=1607.04 Aligned_cols=759 Identities=76% Similarity=1.206 Sum_probs=668.1
Q ss_pred cccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCC
Q 002015 146 AEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKF 224 (981)
Q Consensus 146 g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~ 224 (981)
|++++|.|+.+|+||+++|++|+..+|||||+++||||++||||++||+|+|+ +|||++|+|++|+|..+.+++.....
T Consensus 580 G~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~~~~~ 659 (1344)
T PLN00192 580 GEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGSKTIF 659 (1344)
T ss_pred CCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCCCCCC
Confidence 77788999999999999999999745899999999999999999999999999 99999999999998322233322123
Q ss_pred CCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCC--CCCCCCCHHHHhcCCCCcccCCcccccccCChhh
Q 002015 225 GPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGN--LEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISK 302 (981)
Q Consensus 225 ~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~--l~p~v~d~~~Al~~~a~~~~~~~~~~~~~Gdve~ 302 (981)
.++|+|++++|||+|||||+|||+|+++|++|+++|+||| |+ |.|+++|+++|++++++++.+........||+++
T Consensus 660 ~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeY--e~~~l~p~v~~i~~Al~~~s~~~~~~~~~~~~~GD~~~ 737 (1344)
T PLN00192 660 GPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEY--DTENLEPPILTVEDAVKRSSLFEVPPFLYPKPVGDISK 737 (1344)
T ss_pred CCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEE--ecCCCCCcccCHHHHhcCCCCcccChhhcccccCCHHH
Confidence 5889999999999999999999999999999999999999 64 3388999999999887653222122346799999
Q ss_pred hcccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCC
Q 002015 303 GMNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 382 (981)
Q Consensus 303 af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K 382 (981)
+|++|+++++|++|++++|+|+||||++|+|+|++||+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|
T Consensus 738 af~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lgip~~~VrV~~~~vGGgFGgK 817 (1344)
T PLN00192 738 GMAEADHKILSAEIKLGSQYYFYMETQTALALPDEDNCIVVYSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGK 817 (1344)
T ss_pred HhccCCeEEEEEEEEECCEeeeeccCceEEEEEcCCCCEEEEECCCCHHHHHHHHHHHhCCChHHEEEEecccccCCCcc
Confidence 99999997459999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCCchhHhh
Q 002015 383 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNIPAYM 462 (981)
Q Consensus 383 ~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~ 462 (981)
....++++++||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+...+
T Consensus 818 ~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~~~~~~ 897 (1344)
T PLN00192 818 AVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILINAGISPDISPIMPRNI 897 (1344)
T ss_pred ccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccCCCcchHHHHHH
Confidence 86566778899999999999999999999999999999999999999999999999999999999999987665545555
Q ss_pred hccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCCCC
Q 002015 463 IGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGE 542 (981)
Q Consensus 463 ~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~g~ 542 (981)
.+..++|+|||++++++.|+||++|+|||||||.||++|++|++||++|++|||||+|||+||+++++....||..+.|.
T Consensus 898 ~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~ 977 (1344)
T PLN00192 898 IGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSVRKINLHTYESLKLFYGDSAGE 977 (1344)
T ss_pred hhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHhcCCCccccccCCCCcccc
Confidence 56679999999999999999999999999999999999999999999999999999999999999876544456555554
Q ss_pred cccCCHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCCCceEEEEEeeCCcEEEEecccccCCchh
Q 002015 543 LEEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMSTPGKVSILSDGSVVVEVGGIELGQGLW 622 (981)
Q Consensus 543 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~d~GQG~~ 622 (981)
..+..+++||+++++.++|++|++++++||+.++|++||+|+++..++++..++.+.|+|++||+|+|.+|++|||||++
T Consensus 978 ~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig~~~~~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~ 1057 (1344)
T PLN00192 978 PSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRVPIVHEVMLRPTPGKVSILSDGSIAVEVGGIEIGQGLW 1057 (1344)
T ss_pred cCCCcHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEEEEEEEEeccccCCceEEEEeCCceEEEEECCCCCCCCHH
Confidence 43449999999999999999988888888888899999999999999887778899999999999999999999999999
Q ss_pred hHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 002015 623 TKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQAQMGSV 702 (981)
Q Consensus 623 T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~~~~~~~~ 702 (981)
|+++||||++|||+.++...+|+|+|+|..+||+.+|++++|+|||+|+++|+||++||++|++||++++++++..++.+
T Consensus 1058 T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~~ 1137 (1344)
T PLN00192 1058 TKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGSV 1137 (1344)
T ss_pred HHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 99999999999953333334499999999999999999999999999999999999999999999999998886655679
Q ss_pred CHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhhhhhcccccc
Q 002015 703 KWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNLIYHLDRQI 782 (981)
Q Consensus 703 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (981)
+|.+++..++...+.|.+.++|.+...+.
T Consensus 1138 ~~~~~~~~a~~~~~~L~a~~~~~~~~~~~--------------------------------------------------- 1166 (1344)
T PLN00192 1138 TWDMLISQAYMQSVNLSASSYYTPDPSSM--------------------------------------------------- 1166 (1344)
T ss_pred CHHHHHHHhcCCCCCeEEEEEECCCCCCc---------------------------------------------------
Confidence 99999977665556788777774321000
Q ss_pred ccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeCCCCccccCC
Q 002015 783 ILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEG 862 (981)
Q Consensus 783 ~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~G~~l~~~ 862 (981)
..|+|++|++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+||+.||++|+++|+|
T Consensus 1167 -------~y~~~ga~~~eVEVD~~TG~v~vlr~~~~~D~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd~~G~llt~~ 1239 (1344)
T PLN00192 1167 -------EYLNYGAAVSEVEVDLLTGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTDG 1239 (1344)
T ss_pred -------cccceeEEEEEEEEecCCCcEEEEEEEEEEecCcccCHHHHHHHHHHHHHHHHhHHhceeEEECCCCCCCCCC
Confidence 1256788888899999999999999999999999999999999999999999999999999999899999999
Q ss_pred CCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCcccccCCC
Q 002015 863 TWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQSDLTFDLEVP 942 (981)
Q Consensus 863 ~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~lP 942 (981)
|+||+||++.|+|.+|++.++|++.++.+|||+||+||+++++++++++||+|||++|+.++.++....+....+..+.|
T Consensus 1240 ~~dY~iPt~~DiP~~~~v~~~e~~~~~~~p~gaKgvGE~~~~~~~~v~~Ai~~Ai~~Ar~~~~~~g~~~~~~~~~~l~~p 1319 (1344)
T PLN00192 1240 TWTYKIPTVDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREARKQLLSWGGIDGSDSTFQLPVP 1319 (1344)
T ss_pred hhhcCCCcccccCCceEEEEEeCCCCCCCCCccccCccCcccccHHHHHHHHHHHHHHHhhhcccCCcccCCCceecCCC
Confidence 99999999999995599999998756889999999999999999899999999999999752100000013345778999
Q ss_pred CCHHHHHHhcCCCcHHHHHHhh
Q 002015 943 ATVQVVKELCGPDSVEKYLQWR 964 (981)
Q Consensus 943 ~Tpe~v~~al~~~~~~~~~~~~ 964 (981)
+|||+|+.+|+.+..+.++.++
T Consensus 1320 at~e~i~~~~~~~~~~~~~~~~ 1341 (1344)
T PLN00192 1320 ATMPVVKELCGLDVVERYLEWK 1341 (1344)
T ss_pred CChHHHHHhcCChHHHHhhhhh
Confidence 9999999999986555555544
No 4
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=2.2e-167 Score=1594.48 Aligned_cols=731 Identities=34% Similarity=0.542 Sum_probs=644.3
Q ss_pred ccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCC
Q 002015 145 SAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTK 223 (981)
Q Consensus 145 ~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~ 223 (981)
.|++++|.|+.+|+||+++|++|++.+|||||++++|||++||||++||+|+|+ ||||++|+|++|+| +.+.
T Consensus 576 vGk~v~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp--~~~~----- 648 (1330)
T TIGR02969 576 IGHPIMHLSGVKHATGEAIYCDDMPAVDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQ--DANT----- 648 (1330)
T ss_pred CCCCCcChhhHhhccccccccCCCCCCCCCEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCC--CCCC-----
Confidence 388889999999999999999999645899999999999999999999999999 99999999999998 3221
Q ss_pred CCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCCcccCCcccccccCChhhh
Q 002015 224 FGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKG 303 (981)
Q Consensus 224 ~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~~~~~~~~~~~~~Gdve~a 303 (981)
..++++|++++|||+|||||+|||+|+++|++|+++|+||| |+|.|+++|+++|+++++++... .....||++++
T Consensus 649 ~~~~~~la~~~Vr~~Gqpva~VvAet~~~A~~Aa~~V~VeY--e~l~~~v~d~~~Al~~~a~~~~~---~~~~~Gdv~~a 723 (1330)
T TIGR02969 649 FGTEKLLATDKVHCVGQLVCAVIADSEVQAKQAAKHVKIVY--RDLEPLILTIEEAIQHKSFFEPE---RKLEYGNVDEA 723 (1330)
T ss_pred CCCeeecCCCeEEEcCCeEEEEEECCHHHHHHHhcCCEEEE--ecCCCCcCCHHHHhcCCCEeccc---ccccCCchhhh
Confidence 24788999999999999999999999999999999999999 88855669999999887654311 13578999999
Q ss_pred cccCCeEEEEEEEEEccccccCCCCCeeEEEECC-CCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCC
Q 002015 304 MNEADHKILSAEVKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 382 (981)
Q Consensus 304 f~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~-dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K 382 (981)
|++|+++ ||++|++++|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|
T Consensus 724 f~~a~~v-ve~~y~~~~~~H~~mEp~~~~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K 802 (1330)
T TIGR02969 724 FKVVDQI-LEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGK 802 (1330)
T ss_pred hccCCEE-EEEEEEECCEeecccCCCEEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccc
Confidence 9999996 99999999999999999999999984 578999999999999999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCC-chhHh
Q 002015 383 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSP-NIPAY 461 (981)
Q Consensus 383 ~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~ 461 (981)
.......++++|++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.+.+. ++...
T Consensus 803 ~~~~~~~~~~aA~aA~~~gRPVk~~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~ 882 (1330)
T TIGR02969 803 VGKTSIMAAITAFAANKHGRAVRCTLERGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMG 882 (1330)
T ss_pred cccccHHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHH
Confidence 87322346889999999999999999999999999999999999999999999999999999999999988765 44555
Q ss_pred hhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCCC
Q 002015 462 MIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAG 541 (981)
Q Consensus 462 ~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~g 541 (981)
..+..++|+|||++++++.|+||+||.|+|||||.||++|++|++||++|++|||||+|||+||++++++. +|| |
T Consensus 883 ~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~-~p~----~ 957 (1330)
T TIGR02969 883 LLKMDNAYKFPNLRCRGWACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQ-TPY----K 957 (1330)
T ss_pred HHhcCCCccCCcEEEEEEEEECCCCCCCccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCccc-CCC----C
Confidence 55678999999999999999999999999999999999999999999999999999999999999987654 233 4
Q ss_pred CcccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCC-----CceEEEEEeeCCcEEEEeccc
Q 002015 542 ELEEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLM-----STPGKVSILSDGSVVVEVGGI 615 (981)
Q Consensus 542 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~-----~~~a~v~l~~DG~v~v~~g~~ 615 (981)
+.+++ ++++||+++++.++|+++++.+..+++.++|++||+|+++..++++.. ++.+.|+|++||+|+|.+|++
T Consensus 958 ~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~ 1037 (1330)
T TIGR02969 958 QEINAKNLFQCWRECMAKSSYSERKVAVEKFNAENYWKKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGI 1037 (1330)
T ss_pred cccCCCcHHHHHHHHHHhcCHHHHHHHHHHHhccCCCeEEEEEEEEEEeccccccCCCCCccEEEEEcCCceEEEEECCc
Confidence 44444 999999999999999998877667777778888999999888876543 578999999999999999999
Q ss_pred ccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002015 616 ELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERL 695 (981)
Q Consensus 616 d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~ 695 (981)
|||||++|+++|||||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++|++||++++++.
T Consensus 1038 e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~gSr~t~~~G~Av~~A~~~l~~rl~~~aa~~ 1109 (1330)
T TIGR02969 1038 EMGQGVHTKMIQVVSRELKM--------PMSNVHLRGTSTETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKN 1109 (1330)
T ss_pred CcCCChHHHHHHHHHHHhCC--------CHHHEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999998753
Q ss_pred hhccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhhhh
Q 002015 696 QAQMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNLI 775 (981)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (981)
. ..+|.+++..++...+.|.+.++|...... +.|.
T Consensus 1110 ~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~-------------------------------------- 1144 (1330)
T TIGR02969 1110 P----QGTWKDWAQTAFDQSISLSAVGYFRGYESN---INWE-------------------------------------- 1144 (1330)
T ss_pred C----CCCHHHHHHhhccCCCceEEEEEecCCccc---cccc--------------------------------------
Confidence 2 367998875455445667776665321100 0000
Q ss_pred hccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeCCC
Q 002015 776 YHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSD 855 (981)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~ 855 (981)
..... ....|+|++|++|||||++||+++|+||++++|||++|||.+++||||||++||||+||+||+.||++
T Consensus 1145 ----~~~~~---~~~~~~~ga~~aeVEVD~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vqGiG~al~Ee~~yd~~ 1217 (1330)
T TIGR02969 1145 ----KGEGH---PFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYSPQ 1217 (1330)
T ss_pred ----CcCCC---CccccceeeEEEEEEEecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHHHHHHHHcceeEECCC
Confidence 00000 01258899999999999999999999999999999999999999999999999999999999999989
Q ss_pred CccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCc
Q 002015 856 GLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQSDL 935 (981)
Q Consensus 856 G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~ 935 (981)
|+++|.||+||+||++.|+|.+|++.++++++++.+|||+||+||+++++++++++||+|||++|++.. |..+
T Consensus 1218 G~~lt~~~~dY~iPt~~DiP~~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A~g~~-------g~~~ 1290 (1330)
T TIGR02969 1218 GILYSRGPNQYKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQER-------GLSG 1290 (1330)
T ss_pred CCCCCCCcccccCCchhhcCCCEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHHHhhc-------CCCc
Confidence 999999999999999999994499999975567889999999999999977789999999999999743 3223
Q ss_pred ccccCCCCCHHHHHHhcCCCcHHHH
Q 002015 936 TFDLEVPATVQVVKELCGPDSVEKY 960 (981)
Q Consensus 936 ~~~~~lP~Tpe~v~~al~~~~~~~~ 960 (981)
.++.++|+|||+||++|+.+....+
T Consensus 1291 ~~~~~~P~Tperv~~al~~~~~~~~ 1315 (1330)
T TIGR02969 1291 PWKLTSPLTPEKIRMACEDKFTKMI 1315 (1330)
T ss_pred CccCCCCCCHHHHHHHhhhhHHHhh
Confidence 4688999999999999987543333
No 5
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=9.1e-165 Score=1517.24 Aligned_cols=774 Identities=26% Similarity=0.368 Sum_probs=655.2
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------EeeecccccCC----------------------
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVDAEKTHRP---------------------- 62 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~dg~~~~~~---------------------- 62 (981)
++|+|||+.+ +++|+++|+++||++|+|||+|.|| |||||+++++|
T Consensus 1 ~~~~~ng~~~---~~~~~~~l~~~lr~~~~~~~~k~gc~~g~cgactv~~dg~~~~sc~~~~~~~~g~~i~T~egl~~~~ 77 (848)
T TIGR03311 1 YEFIVNGREV---DVNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIVNGKAVRACRFTTAKLAGKEITTVEGLTERE 77 (848)
T ss_pred CEEEECCEEe---eCCCCCcHHHHHHHhcCCCcCCCCCCCCCCCCcEEEECCeEEehhhhhHHhcCCCEEEecCCCCCCC
Confidence 3799999854 4679999999999999999999999 99999998754
Q ss_pred -----------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHhhcccccccccccc
Q 002015 63 -----------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLGDRLC 114 (981)
Q Consensus 63 -----------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~~~~~~~~~~~~~~ 114 (981)
.|||||+ +|+++||+++|+|||||||||++|++|++.+++....+..
T Consensus 78 ~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~~~~p~~~~i~~~l~gnlcrctgy~~i~~a~~~~~~~~~~~~~----- 152 (848)
T TIGR03311 78 KDVYAWAFAKAGAVQCGFCIPGMVISAKALLDKNPNPTEAEIKKALKGNICRCTGYVKIIKAVRLAAKAFREEIE----- 152 (848)
T ss_pred CCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhcCCCCCHHHHHHHHhcCccccCChHHHHHHHHHHHHhhccccc-----
Confidence 2789983 7899999999999999999999999999988765533110
Q ss_pred CCCCchhhhhhhcccccccccccccccccCccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEec
Q 002015 115 GYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI 194 (981)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~ 194 (981)
.+ +. .. .-..|++++|.|+.+|+||+++|++|+. +|||||++++|||++||+|++||+
T Consensus 153 -~~-----------~~-----~~----~~~iG~~~~R~d~~~kvtG~~~Y~~Di~-~pgmL~a~~vrSp~ahA~I~~ID~ 210 (848)
T TIGR03311 153 -PP-----------RG-----EP----KGKLGENFPRVDAVPKVLGEGVYVDDMQ-IEGMLYGSALRSKYPRALVKSIDI 210 (848)
T ss_pred -cc-----------cc-----cc----cCCCCCccCCcChhhhCcccccccccCC-CCCCEEEEEEeCCCCCEEEEeeEH
Confidence 00 00 00 0125899999999999999999999997 789999999999999999999999
Q ss_pred CCCC-CCCEEEEEEccCCCcCCCCcccCCCCCCccc-cC-CCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCC
Q 002015 195 KSKS-LPGVSAFLSYKDIPEAGQNIGSRTKFGPEPL-FA-DELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEP 271 (981)
Q Consensus 195 s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~~~~p~-la-~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p 271 (981)
|+|+ ||||++|+|++|+|. ..+++. ...++|. ++ +++|||+|||||+|+|+|+++|++|+++|+||| |+| |
T Consensus 211 s~A~a~PGV~aVvt~~Dip~-~~~~g~--~~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Vey--e~l-p 284 (848)
T TIGR03311 211 TVALKHPGVVAVLTAKDIPG-NRKIGH--IFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDY--EEL-P 284 (848)
T ss_pred HHHHhCCCcEEEEeHHHCCC-ccCCCC--CCCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEE--ecC-C
Confidence 9999 999999999999983 112222 1234443 33 689999999999999999999999999999999 889 9
Q ss_pred CCCCHHHHhcCCCC--cccCCccc---ccccCChhhhcccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeC
Q 002015 272 PILSVEEAVGRSSF--FEVPSFLY---PKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSS 346 (981)
Q Consensus 272 ~v~d~~~Al~~~a~--~~~~~~~~---~~~~Gdve~af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~s 346 (981)
+++|+++|++++++ |+ ++|+. ....||++++|++|+++ ||++|++++++|++|||++|+|+|++ ++|+||+|
T Consensus 285 ~v~d~~~A~~~~a~~i~~-~~Nv~~~~~~~~Gdv~~af~~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~-~~l~v~~s 361 (848)
T TIGR03311 285 PLTSPEEALAEGAPAIHP-KGNILSEEHVVRGDAEEALENSAYV-VTNHYSTPFTEHAFLEPESALAVPEG-DGVIIYTS 361 (848)
T ss_pred CcCCHHHHhcCCCCeECC-CCCCcceeeecCCCHHHHhhcCCeE-EEEEEEECCEeeeecCCceEEEEEeC-CeEEEEEC
Confidence 99999999998874 33 35553 35789999999999996 99999999999999999999999984 56999999
Q ss_pred CCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCCCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEE
Q 002015 347 IQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIE 426 (981)
Q Consensus 347 tQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~ 426 (981)
||+||.+|..||++||||++||||+.+++|||||+|... + .+..+|++|+++||||||+|||+|+|+++.+||++.++
T Consensus 362 tQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~-~-~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~ 439 (848)
T TIGR03311 362 TQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGGKEDM-S-VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMT 439 (848)
T ss_pred CcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCccccc-c-HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEE
Confidence 999999999999999999999999999999999999863 3 35678899999999999999999999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEEEEeCCCCCCCCC-chhHhhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHH
Q 002015 427 YNVGFKSNGKITALQLNILIDAGQYPDVSP-NIPAYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEA 505 (981)
Q Consensus 427 ~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~ 505 (981)
+|+|+|+||+|+|++++++.|+|+|.+++. ++......+.++|+|||++++++.|+||++|+|+|||||.||+.|++|+
T Consensus 440 ~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~ 519 (848)
T TIGR03311 440 FTTGCDEAGNLTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMEC 519 (848)
T ss_pred EEEEECCCCcEEEEEEEEEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHH
Confidence 999999999999999999999999988765 4444455678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCCCCccc-C-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecc
Q 002015 506 VIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEE-Y-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGIS 583 (981)
Q Consensus 506 ~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~g~~~~-~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig 583 (981)
+||++|++|||||+|||+||++++++. +++|+.++ + .+++||+++++. |.+ ++++|++
T Consensus 520 ~mD~lA~~lg~DP~E~R~rN~~~~gd~-----~~~g~~~~~~~~~~~~l~~~~~~--~~~-------------~~~~G~~ 579 (848)
T TIGR03311 520 NLNLLAEKVGLSPWEIRFKNAVEPGDT-----LPNGQVVSEGTAIKETLLAVKEV--YEK-------------SPCAGIA 579 (848)
T ss_pred HHHHHHHHhCcCHHHHHHHhCCCCCCc-----CCCCceeCCCchHHHHHHHHHHH--hhh-------------ccCCeEE
Confidence 999999999999999999999998763 34677776 3 599999999874 431 1245666
Q ss_pred cccEEeecCC---CCceEEEEEeeCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccC
Q 002015 584 RVPIVYDVPL---MSTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQ 660 (981)
Q Consensus 584 ~a~~~~~~~~---~~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~ 660 (981)
+.....+.+. ..+.+.++++ ||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|+
T Consensus 580 ~~~~~~g~~~~~~~~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~ 650 (848)
T TIGR03311 580 CAFKNSGVGVGIPDTGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGL--------PPEVIVCELPDTALTPD 650 (848)
T ss_pred EEEEEeccccCCCCcceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCC--------CHHHEEEEcCCCCCCCC
Confidence 5433333332 1356778887 9999999999999999999999999999999 99999999999999999
Q ss_pred CCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEE
Q 002015 661 GGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAV 740 (981)
Q Consensus 661 ~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~ 740 (981)
+++|+|||+|+++|+||++||++||+||++.. |.++. +-.+.. . |... ....
T Consensus 651 ~~gt~aSR~t~~~G~Av~~Aa~~l~~~l~~~~-----------~~~l~------~~~~~~-~-~~~~---------~~~~ 702 (848)
T TIGR03311 651 SGTTTASRQSLFTGEATRRAAAKLKEALRGRT-----------LAELE------GEEFYG-E-YHSI---------TDPL 702 (848)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhcC-----------HHHcC------CCEEee-c-cccc---------cCcc
Confidence 99999999999999999999999999997431 22220 000000 0 0000 0000
Q ss_pred EeeeccccccccccchhhhhhhhhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEec
Q 002015 741 SEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYD 820 (981)
Q Consensus 741 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D 820 (981)
.. ...+ + ....+|+|++|++|| | +|| +|+||++++|
T Consensus 703 ~~--------------------------------~~~~------~-~~~~~~~~~~~~~eV--d-~tG--~v~r~~~v~D 738 (848)
T TIGR03311 703 NS--------------------------------DKEN------P-VSHVGYGYATQVVIL--D-DAG--KVEKVVAAYD 738 (848)
T ss_pred ee--------------------------------eccC------C-CCccccceEEEEEEE--C-CCC--eEEEEEEEEe
Confidence 00 0000 0 012357777877655 6 999 5779999999
Q ss_pred cCcccChhhhhhhhhhhHHhhHhHHhcccceeCCCCccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCC
Q 002015 821 CGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGE 900 (981)
Q Consensus 821 ~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE 900 (981)
||++|||.+++||||||++||||+||+|++.|| +|++++ +|+||+||++.|+|+ |+++++|++ +|.+|||+||+||
T Consensus 739 ~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d-~G~~~~-~~~dY~iPt~~D~P~-i~v~~ve~~-~~~~p~GaKGvGE 814 (848)
T TIGR03311 739 VGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR-EGIPTA-KFGTLGLFRSTQVPE-IETHLIEKN-GTPLAYGAKGVGE 814 (848)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec-CCeecC-ChhhccCCChhhCCC-eEEEEEeCC-CCCCCCCCccCCC
Confidence 999999999999999999999999999999998 599886 599999999999995 999999986 6889999999999
Q ss_pred CCccchhhHHHHHHHHHHHHHHhhhcccccCCCCcccccCCCCCHHHHH
Q 002015 901 PPLLLAVSVHCATRAAIREARKQLLSWSQLDQSDLTFDLEVPATVQVVK 949 (981)
Q Consensus 901 ~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~lP~Tpe~v~ 949 (981)
+++++ +++||+|||+||+| +++++||+||||||
T Consensus 815 ~~~~~---~~~AIanAV~~A~G-------------~r~~~lP~~p~~v~ 847 (848)
T TIGR03311 815 LATIP---TAPAVAGAYYRFDG-------------KFRLSLPLENTPYT 847 (848)
T ss_pred Ccccc---hHHHHHHHHHHhHC-------------cCcccCCCCccccc
Confidence 99998 77899999999997 68899999999997
No 6
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=2.6e-163 Score=1558.76 Aligned_cols=729 Identities=37% Similarity=0.583 Sum_probs=651.5
Q ss_pred ccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCC
Q 002015 145 SAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTK 223 (981)
Q Consensus 145 ~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~ 223 (981)
.|++++|.|+..|+||+++|++|++.+|||||+++||||++||||++||+|+|+ ||||++|+|++|+|. ..+++. .
T Consensus 565 vGk~~~r~d~~~kvtG~a~Y~~Di~~~~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip~-~~~~g~--~ 641 (1319)
T PLN02906 565 VGQPEVHLSAELQVTGEAEYADDIPMPPNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVPG-DNMIGP--V 641 (1319)
T ss_pred CCCCccCcchhhhcceeEEeccCCcCCCCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCCC-CCCCCC--C
Confidence 377788999999999999999999745899999999999999999999999999 999999999999982 122332 2
Q ss_pred CCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCCcccCCcccccccCChhhh
Q 002015 224 FGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKG 303 (981)
Q Consensus 224 ~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~~~~~~~~~~~~~Gdve~a 303 (981)
..++|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++|+.. ......||++++
T Consensus 642 ~~~~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~~V~Vey--e~l-p~v~~~~~Al~~~a~~~~~--~~~~~~Gdv~~a 716 (1319)
T PLN02906 642 VHDEELFATDVVTCVGQVIGVVVADTQENAKAAARKVKVEY--EEL-PAILSIEEAIEAGSFHPNT--ERRLEKGDVELC 716 (1319)
T ss_pred CCCeeEecCcEEEEcCCeEEEEEECCHHHHHHHhCCCEEEE--ecC-CccCCHHHHhcCCCcccCC--CceeecCCHHHH
Confidence 35889999999999999999999999999999999999999 889 8999999999988866421 123578999999
Q ss_pred ccc--CCeEEEEEEEEEccccccCCCCCeeEEEECCC-CeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCC
Q 002015 304 MNE--ADHKILSAEVKLGSQYYFYMETQTALAVPDED-NCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFG 380 (981)
Q Consensus 304 f~~--A~~vvve~~y~~~~~~h~~mEp~~avA~~~~d-g~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG 380 (981)
|++ |+++ ||++|++++|+|+||||++|+|+|+++ |+|+||+|||+|+.+|..||++||||++||||+.+++|||||
T Consensus 717 f~~a~a~~v-ve~~~~~~~~~H~~mEp~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFG 795 (1319)
T PLN02906 717 FASGQCDRI-IEGEVQMGGQEHFYLEPNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFG 795 (1319)
T ss_pred hhccCCceE-EEEEEEECCccccccCCCeEEEEEeCCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCcc
Confidence 999 6986 999999999999999999999999977 689999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCC-chh
Q 002015 381 GKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSP-NIP 459 (981)
Q Consensus 381 ~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~ 459 (981)
+|.+....+++++|++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|+|++++++.|.|+|.+++. ++.
T Consensus 796 gK~~~~~~~~~~aAlaA~~~gRPVkl~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~ 875 (1319)
T PLN02906 796 GKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLE 875 (1319)
T ss_pred ccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHH
Confidence 9987555567888999999999999999999999999999999999999999999999999999999999988765 445
Q ss_pred HhhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCC
Q 002015 460 AYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESS 539 (981)
Q Consensus 460 ~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~ 539 (981)
..+.+..++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||++++++. ++
T Consensus 876 ~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~-----~~ 950 (1319)
T PLN02906 876 RAMFHSDNVYEIPNVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSV-----TH 950 (1319)
T ss_pred HHHHhcCCCccCcceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCC-----Cc
Confidence 5556678999999999999999999999999999999999999999999999999999999999999987654 34
Q ss_pred CCCcccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCC-----CCceEEEEEeeCCcEEEEec
Q 002015 540 AGELEEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPL-----MSTPGKVSILSDGSVVVEVG 613 (981)
Q Consensus 540 ~g~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~-----~~~~a~v~l~~DG~v~v~~g 613 (981)
+|+.+++ .+++||+++++.++|+++++++..||+.++|++||+|+++..++.+. .++.+.|+|++||+|+|.+|
T Consensus 951 ~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~G 1030 (1319)
T PLN02906 951 YGQVLQHCTLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHG 1030 (1319)
T ss_pred CCccccCCCHHHHHHHHHHhCCHHHHHHHHHHHhhcCCCceEEEEEEecccccccccccCCccceEEEEcCCceEEEEEC
Confidence 5766665 99999999999999998887777788878898899999887777654 35789999999999999999
Q ss_pred ccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 002015 614 GIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRE 693 (981)
Q Consensus 614 ~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa 693 (981)
++|||||++|+++|||||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+++++
T Consensus 1031 ~~e~GQG~~T~~aQiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~ 1102 (1319)
T PLN02906 1031 GVEMGQGLHTKVAQVAASAFNI--------PLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVAS 1102 (1319)
T ss_pred CccCCCChHHHHHHHHHHHHCC--------CHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999987
Q ss_pred HHhhccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhh
Q 002015 694 RLQAQMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLN 773 (981)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (981)
++ ..++|++++..++..+..|.+.++|..... .+.+... .
T Consensus 1103 ~~----~~~~~~~l~~~~~~~~~~l~a~~~~~~~~~---~~~~~~~--~------------------------------- 1142 (1319)
T PLN02906 1103 KL----NFSSFAELVTACYFQRIDLSAHGFYITPDI---GFDWKTG--K------------------------------- 1142 (1319)
T ss_pred Hc----CCCCHHHHHHHhhccCCCeEEEEEecCCCc---ccccccc--c-------------------------------
Confidence 65 348899999877655666777777754210 0111100 0
Q ss_pred hhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeC
Q 002015 774 LIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTN 853 (981)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd 853 (981)
.. ....|+|++|++|||||++||+++|+||++++|||++|||.+++||||||++||||+||+||+.||
T Consensus 1143 ---------~~---~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~~~GQieGg~vqGiG~aL~Ee~~~d 1210 (1319)
T PLN02906 1143 ---------GN---PFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAFVQGLGWVALEELKWG 1210 (1319)
T ss_pred ---------CC---CccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccCCHHHHhHhhHHHHHHHHHHHhcCceEEc
Confidence 00 011478999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-------CccccCCCCCCCCCCCCCCCCceEEEEec-CCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhh
Q 002015 854 SD-------GLVVSEGTWTYKIPTLDTIPKQFNVEILN-SGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLL 925 (981)
Q Consensus 854 ~~-------G~~l~~~~~dY~iP~~~DiP~~i~v~~~e-~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~ 925 (981)
++ |+++|+||+||+||++.|+|.+|++.+++ ++ +|.+|||+||+||+++++++++++||+|||++|++..
T Consensus 1211 ~~~~~~~~~G~llt~~~~~Y~iPt~~DiP~~~~v~~~~~~~-~~~~p~gaKGvGE~~~~~~aav~~AI~~Ai~~A~~~~- 1288 (1319)
T PLN02906 1211 DAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAP-NPKAIHSSKAVGEPPFFLAASVFFAIKDAIKAARAEV- 1288 (1319)
T ss_pred ccccccCCCCccccCCCcccCCCCccccCCceEEEEEeCCC-CCCCCCcCccCCccccccchHHHHHHHHHHHHHHhhc-
Confidence 76 99999999999999999999549999996 54 7899999999999999998889999999999999753
Q ss_pred cccccCCCCcccccCCCCCHHHHHHhcCCC
Q 002015 926 SWSQLDQSDLTFDLEVPATVQVVKELCGPD 955 (981)
Q Consensus 926 ~~~~~~g~~~~~~~~lP~Tpe~v~~al~~~ 955 (981)
|..++++.++|+||||||++|+.+
T Consensus 1289 ------g~~~~~~~~~P~Tperi~~a~~~~ 1312 (1319)
T PLN02906 1289 ------GLHGWFPLDTPATPERIRMACGDE 1312 (1319)
T ss_pred ------CCCCcccCCCCCCHHHHHHHccch
Confidence 333457899999999999999774
No 7
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=5.8e-158 Score=1449.53 Aligned_cols=731 Identities=34% Similarity=0.501 Sum_probs=642.1
Q ss_pred cccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCC
Q 002015 146 AEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKF 224 (981)
Q Consensus 146 g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~ 224 (981)
|++++|.|+.+|+||+++|++|+..+|||||++++|||++||||++||+|+|+ ||||++|+|++|+| +.+... ...
T Consensus 2 G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p--~~~~~g-~~~ 78 (758)
T TIGR02965 2 GTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIP--GENDIS-PII 78 (758)
T ss_pred CCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCC--CCCCCC-CCC
Confidence 77889999999999999999999536899999999999999999999999999 99999999999998 323211 123
Q ss_pred CCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCCcccCCcccccccCChhhhc
Q 002015 225 GPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGM 304 (981)
Q Consensus 225 ~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~~~~~~~~~~~~~Gdve~af 304 (981)
.++|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++...+. .....||++++|
T Consensus 79 ~~~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~y--e~l-p~v~d~~~Al~~~a~~~~~~--~~~~~Gd~~~af 153 (758)
T TIGR02965 79 HDDPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEY--EEL-PAVLDIEEALAAGSRFVTPP--LTLERGDAEAAL 153 (758)
T ss_pred CCceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEE--EcC-CccCCHHHHhcCCCCcccCc--ccccCCCHHHHH
Confidence 5889999999999999999999999999999999999999 889 99999999999887432111 135789999999
Q ss_pred ccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCCCc
Q 002015 305 NEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAI 384 (981)
Q Consensus 305 ~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K~~ 384 (981)
++|+++ ||++|++++++|++|||++|+|+||++|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+
T Consensus 154 ~~a~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~ 232 (758)
T TIGR02965 154 AAAPHR-LSGEMRIGGQEHFYLEGQIALAVPGEDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKET 232 (758)
T ss_pred hhCCEE-EEEEEEECCEeEEecCCceEEEEEcCCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCcccccc
Confidence 999996 9999999999999999999999999777899999999999999999999999999999999999999999987
Q ss_pred ccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCC-chhHhhh
Q 002015 385 KAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSP-NIPAYMI 463 (981)
Q Consensus 385 ~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~ 463 (981)
...++++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|.|+|.+.+. .+.....
T Consensus 233 ~~~~~~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~ 312 (758)
T TIGR02965 233 QANLFACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALF 312 (758)
T ss_pred ccchHHHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHH
Confidence 433556889999999999999999999999999999999999999999999999999999999999986554 3344445
Q ss_pred ccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCCCCc
Q 002015 464 GALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGEL 543 (981)
Q Consensus 464 ~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~g~~ 543 (981)
...++|+|||++++++.|+||++|+|+|||||.||+.|++|++||++|++|||||+|||+||++++++. +.+++|+.
T Consensus 313 ~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~---~~~~~g~~ 389 (758)
T TIGR02965 313 HADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDER---NVTPYHQT 389 (758)
T ss_pred hcCCcccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCC---CcCCCcee
Confidence 667999999999999999999999999999999999999999999999999999999999999988753 23456877
Q ss_pred ccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCC-----CCceEEEEEeeCCcEEEEeccccc
Q 002015 544 EEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPL-----MSTPGKVSILSDGSVVVEVGGIEL 617 (981)
Q Consensus 544 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~-----~~~~a~v~l~~DG~v~v~~g~~d~ 617 (981)
+++ ++++||+++++.++|++++++..+++..++|++||+|+++..++.+. .++.+.|+|++||+|+|++|.+||
T Consensus 390 ~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e~ 469 (758)
T TIGR02965 390 VEDNIIHEIIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTEM 469 (758)
T ss_pred ccCCcHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCCC
Confidence 766 99999999999999998877666666667777889998877776543 257899999999999999999999
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002015 618 GQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQA 697 (981)
Q Consensus 618 GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~~~ 697 (981)
|||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+++|+++++
T Consensus 470 GQG~~T~laQIaAe~LGi--------~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l~ 541 (758)
T TIGR02965 470 GQGLNTKVAQVVAEEFQV--------DIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKWQ 541 (758)
T ss_pred CCCHHHHHHHHHHHHhCC--------CHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999 999999999999999999999999999999999999999999999999998875
Q ss_pred cc---------------CCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhh
Q 002015 698 QM---------------GSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFL 762 (981)
Q Consensus 698 ~~---------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~ 762 (981)
.+ ..++|.+++..++.....|.....|...... +... .
T Consensus 542 ~~~~~l~~~~g~v~~~~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~-----~~~~--~-------------------- 594 (758)
T TIGR02965 542 VPAEDVRFAPNHVRVGEQRVPFAELVQQAYFARVQLSSTGFYKTPKIH-----WDRA--K-------------------- 594 (758)
T ss_pred CCHHHEEEECCEEEeCCCccCHHHHHHHHhhcCCCcEEEEEEcCCCcc-----cccc--c--------------------
Confidence 31 2477888876655444456666666432110 0000 0
Q ss_pred hhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhH
Q 002015 763 LSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGI 842 (981)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGi 842 (981)
... .....|+|++|++|||||++||+|+|+||+++||||++|||++++||||||++|||
T Consensus 595 --------------------~~~-~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGi 653 (758)
T TIGR02965 595 --------------------GRG-RPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLNPAIDIGQVEGGFVQGM 653 (758)
T ss_pred --------------------cCC-CCcceeeeeEEEEEEEEecCCCcEEEEEEEEEEecCCcCCHHHhhhhhhhhhhhhh
Confidence 000 00116889999999999999999999999999999999999999999999999999
Q ss_pred hHHhcccceeCCCCccccCCCCCCCCCCCCCCCCceEEEEecC-CCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHH
Q 002015 843 GFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNS-GHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREAR 921 (981)
Q Consensus 843 G~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~-~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~ 921 (981)
|+||+|++.||++|+++|+||+||++|++.|+|++|++.++|+ ++++.+|||+||+||+++++++++++||.|||++|+
T Consensus 654 G~aL~E~~~~d~~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~~~~p~GaKGvGE~~~~~~aav~~AI~nAi~~a~ 733 (758)
T TIGR02965 654 GWLTTEELVWDEKGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENREDTIHRSKAVGEPPLMLGISVLFAISDAVASVA 733 (758)
T ss_pred hHhhccceEECCCcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCCCCCCcCCcccCccchhhHHHHHHHHHHHHHHhh
Confidence 9999999999989999999999999999999994399999994 435689999999999999987789999999999999
Q ss_pred HhhhcccccCCCCcccccCCCCCHHHHHHhcCC
Q 002015 922 KQLLSWSQLDQSDLTFDLEVPATVQVVKELCGP 954 (981)
Q Consensus 922 ~~~~~~~~~~g~~~~~~~~lP~Tpe~v~~al~~ 954 (981)
+-. ..+++++|+|||+||++|+.
T Consensus 734 g~~----------~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 734 DYR----------VCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred ccC----------CCCCCCCCCCHHHHHHHHHh
Confidence 611 01448999999999999864
No 8
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=6.2e-154 Score=1415.96 Aligned_cols=706 Identities=22% Similarity=0.258 Sum_probs=605.1
Q ss_pred CccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCCCCccccC
Q 002015 153 SREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKFGPEPLFA 231 (981)
Q Consensus 153 ~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~~~~p~la 231 (981)
||.+|+||+++|++|+. +|||||++++|||++||||++||+|+|+ ||||++|+|++|+|....+........++|+|+
T Consensus 1 e~~r~vtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~~~~~~~~la 79 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVK-LPGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWMPTLAGDVQAVLA 79 (770)
T ss_pred CCcccccccccccccCC-CCCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcCCCCCCCCcccCc
Confidence 67899999999999997 7899999999999999999999999999 999999999999972111111100112378999
Q ss_pred CCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCC--ccc-CC------------cc-ccc
Q 002015 232 DELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSF--FEV-PS------------FL-YPK 295 (981)
Q Consensus 232 ~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~--~~~-~~------------~~-~~~ 295 (981)
++||||+|||||+|||+|+++|++|+++|+||| |+| |+|+|+++|++++++ |+. ++ |. ...
T Consensus 80 ~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~~~ 156 (770)
T TIGR02416 80 DEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIFRW 156 (770)
T ss_pred CCEEEEcCCcEEEEEECCHHHHHHHhccceeee--ecC-CccCCHHHHhcCCCceecCCCCCccccccccccccceeeEE
Confidence 999999999999999999999999999999999 889 999999999988774 321 11 22 222
Q ss_pred ---ccCChhhhcccCCeEEEEEEEEEccccccCCCCCeeEEEECC-CCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEE
Q 002015 296 ---SVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVI 371 (981)
Q Consensus 296 ---~~Gdve~af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~-dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~ 371 (981)
..||++++|++|+++ ||++|++++++|++|||++|+|+||+ +|+|+||+|||+|+.+|..||++||||++||||+
T Consensus 157 ~~gd~gd~~~af~~a~~v-ve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~ 235 (770)
T TIGR02416 157 EIGDKAATDAVFAKAEVV-VKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVI 235 (770)
T ss_pred ecCCccchhHHhccCCEE-EEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEE
Confidence 445679999999996 99999999999999999999999985 6789999999999999999999999999999999
Q ss_pred eccCCCCCCCCCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCC
Q 002015 372 TRRVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQY 451 (981)
Q Consensus 372 ~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay 451 (981)
++++|||||+|... ++..++||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|+|+|
T Consensus 236 ~~~vGGgFG~K~~~-~~~~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay 314 (770)
T TIGR02416 236 SPDIGGGFGNKVGI-YPGYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHGAF 314 (770)
T ss_pred cCCCCCCccccccc-ccHHHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeecccc
Confidence 99999999999863 44546688999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-chhHhhh--ccCCCcccccEEEEEEEeecCCCccc-ccC-CCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhc
Q 002015 452 PDVSP-NIPAYMI--GALKKYDWGALHFDIKVCRTNLPSRT-AMR-APGEVQGSFIAEAVIEHVASTLSMEVDFVRSINL 526 (981)
Q Consensus 452 ~~~~~-~~~~~~~--~~~g~Y~ipn~~~~~~~v~TN~~p~g-a~R-G~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl 526 (981)
.+++. ++..... ...++|+|||++++++.|+||++|.| +|| |||.||+.|++|++||++|++|||||+|||+||+
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~ 394 (770)
T TIGR02416 315 DACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNF 394 (770)
T ss_pred CCCccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhC
Confidence 87654 3232222 35799999999999999999999998 999 8999999999999999999999999999999999
Q ss_pred CCCCCccccccCCCCCcccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCc-ceeecccccEEeecCCC----------
Q 002015 527 HTHNSLNLFYESSAGELEEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLW-RKKGISRVPIVYDVPLM---------- 594 (981)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~grGig~a~~~~~~~~~---------- 594 (981)
+++++ +||.+++|+.+++ ++++||+++++.++|+++++++..+++.+++ ..+|+|++++.+..+..
T Consensus 395 ~~~~~--~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~~~ 472 (770)
T TIGR02416 395 IQPEQ--FPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDILGV 472 (770)
T ss_pred CCCcc--CccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCccccccccc
Confidence 98864 4677888988877 9999999999999999876554434443432 23466665544433322
Q ss_pred --CceEEEEEeeCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhh
Q 002015 595 --STPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEA 672 (981)
Q Consensus 595 --~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~ 672 (981)
++.+.|+|++||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|++
T Consensus 473 ~~~~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~~Sr~t~~ 544 (770)
T TIGR02416 473 GMFDSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGI--------PAEDIMVEEGDTDTAPYGLGTYGSRSTPV 544 (770)
T ss_pred CccceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCC--------CHHHEEEEecCCCCCCCCCCCchhHHHHH
Confidence 35699999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccC------------------CCCHHHHHHHHhhcc-----ceeeEeEEecCCCC
Q 002015 673 SCQAVRNCCKILVERLTPLRERLQAQMG------------------SVKWETLIQQAYLQS-----VSLSASSLYLPDFT 729 (981)
Q Consensus 673 ~g~Av~~Aa~~l~~~l~~~aa~~~~~~~------------------~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~ 729 (981)
+|+||++||++||+||+++|+++++... .++|.+++..++... ..|.....|
T Consensus 545 ~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~----- 619 (770)
T TIGR02416 545 AGAATALAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYY----- 619 (770)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEe-----
Confidence 9999999999999999999988764310 134444433321100 000000000
Q ss_pred ccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCc
Q 002015 730 SMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGE 809 (981)
Q Consensus 730 ~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~ 809 (981)
+ .....|+|++|++|||||++||+
T Consensus 620 -------------------------------------------------~-------~~~~~~~~ga~~~eVeVD~~TG~ 643 (770)
T TIGR02416 620 -------------------------------------------------D-------PPNMTYPFGAYFCVVDIDVDTGV 643 (770)
T ss_pred -------------------------------------------------C-------CCCCCCCceeEEEEEEEECCCCe
Confidence 0 01225889999999999999999
Q ss_pred EEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeCCCCccccCCCCCCCCCCCCCCCCceEEEEecCCCCC
Q 002015 810 TTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHK 889 (981)
Q Consensus 810 v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~ 889 (981)
++|+||++++|||++|||++++|||+||++||||+||+|++.||++|+++|+||+||++|++.|+|+ +++.++|++ ++
T Consensus 644 v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~G~~l~~~~~dY~iPta~DvP~-~~~~~~e~~-~~ 721 (770)
T TIGR02416 644 AKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDEQGNVLGASLMDYFLPTAVETPH-WETDHTVTP-SP 721 (770)
T ss_pred EEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceECCCCCCCCCChhhCcCCchhcCCC-eEEEEeecC-CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 999999886 68
Q ss_pred CCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCcccccCCCCCHHHHHH
Q 002015 890 KRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQSDLTFDLEVPATVQVVKE 950 (981)
Q Consensus 890 ~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~lP~Tpe~v~~ 950 (981)
.+|||+||+||+++++ +++||+|||+||+.+. | ++++++|+|||+||+
T Consensus 722 ~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~-------G---v~~~~lP~Tpe~v~~ 769 (770)
T TIGR02416 722 HHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFL-------G---VGHIDMPHTAWRVWK 769 (770)
T ss_pred CCCCCccccCCccccc---HHHHHHHHHHHHHhhc-------C---CCcccCCCCHHHHhh
Confidence 8999999999999998 6779999999997543 3 678899999999996
No 9
>KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.1e-153 Score=1354.89 Aligned_cols=721 Identities=47% Similarity=0.757 Sum_probs=663.1
Q ss_pred cccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCC-CCcccCCC
Q 002015 146 AEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAG-QNIGSRTK 223 (981)
Q Consensus 146 g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g-~~~~~~~~ 223 (981)
|+++.........||+|.|+|||+.+++.||++||.|+.+||+|+|||+|+|+ +|||+++++++|+|..+ .+++....
T Consensus 529 G~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I~sID~seAl~~~GVv~~~~akDiPg~n~~~i~~~~~ 608 (1257)
T KOG0430|consen 529 GRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKILSIDASEALKLPGVVAFFSAKDIPGNNMKNIGNMFF 608 (1257)
T ss_pred cchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEEeeecchhhcCCCceEEEEecccCCCCCccccccccC
Confidence 45555556667789999999999989999999999999999999999999999 99999999999999432 12333333
Q ss_pred CCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCCcccCCcccccccCChhhh
Q 002015 224 FGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKG 303 (981)
Q Consensus 224 ~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~~~~~~~~~~~~~Gdve~a 303 (981)
+.++++||+++|+|+||||++|||+|.++|++|++||+|+| ++|+|+++++++|++..++.+.+. .+..+++.+.
T Consensus 609 ~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~rAA~lVkv~Y--~~l~p~I~t~e~Ai~~~s~~~~~~---~~~~~~~~~~ 683 (1257)
T KOG0430|consen 609 PEDEELFATDVVTCVGQPIGVIVADTHELAKRAAKLVKVEY--EELPPPILPSEDAVKDKSLSETEP---RLRKGDVGKS 683 (1257)
T ss_pred CCccceeecceeEEcCcEEEEEEeCCHHHHHHhhhceEEEe--ccCCCceecHHHHHhhhcccCCCc---cccccCcccc
Confidence 46899999999999999999999999999999999999999 778788999999998877654222 2455665555
Q ss_pred c--ccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCC
Q 002015 304 M--NEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGG 381 (981)
Q Consensus 304 f--~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~ 381 (981)
| .++|.+ +|++++.+.|+|+||||++++|++++| .|.||+|||+|..+|..||++||||.+||+|++.|+||||||
T Consensus 684 ~~~~~~d~i-~~Ge~~mG~QeHFYmEtQttl~vP~e~-el~v~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGG 761 (1257)
T KOG0430|consen 684 FQLEECDKI-LEGELDMGGQEHFYMEPQTTLVVPFEG-ELQVYSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGG 761 (1257)
T ss_pred cccccccee-EEEEEEecceeEEEeccceeEEeecCC-eEEEEEcCcCcHHHHHHHHHHhCCCccceEEEEEeecccccc
Confidence 5 567875 999999999999999999999999976 799999999999999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCCchhHh
Q 002015 382 KAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNIPAY 461 (981)
Q Consensus 382 K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~ 461 (981)
|.....+++++|||+|+|++||||.+++|++||..+++|||++.+|++|+++||||+|++.+++.|+|+..+.++.+.++
T Consensus 762 K~trs~~VA~a~ALaA~Kl~RPvr~~l~r~~dM~itG~Rhp~~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~~~ 841 (1257)
T KOG0430|consen 762 KETRSNPVAAAAALAAYKLNRPVRFVLSRESDMIITGKRHPFHGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVLRA 841 (1257)
T ss_pred ccccccHHHHHHHHHHHHhCCCEEEEecchhhhhhcCCccceEEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999866688
Q ss_pred hhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCCC
Q 002015 462 MIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAG 541 (981)
Q Consensus 462 ~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~g 541 (981)
++++.++|++||+|++++.|.||.|+.+||||||.||+.+..|+.|.++|.++|+||.|+|++|+.+.++... + .|
T Consensus 842 ~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~pQG~~i~E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~-~---~~ 917 (1257)
T KOG0430|consen 842 MFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGSPQGILITENIIERIAFELGKDPEEVRKINFYVEGSLTY-Y---HG 917 (1257)
T ss_pred hhhhhheecccceeeeeeEEecCCCCcchhcCCCChhhHHHHHHHHHHHHHHhCCCHHHHhhhhhhhcccccc-c---CC
Confidence 8899999999999999999999999999999999999999999999999999999999999999988876532 1 25
Q ss_pred CcccCCHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCCC-ceEEEEEeeCCcEEEEecccccCCc
Q 002015 542 ELEEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMS-TPGKVSILSDGSVVVEVGGIELGQG 620 (981)
Q Consensus 542 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~~-~~a~v~l~~DG~v~v~~g~~d~GQG 620 (981)
....+.+++||+++.+.++|++|+.++++||+.++|+||||++.+..+++++.. ..|.|.|+.||||.|.+|++|||||
T Consensus 918 ~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKRGi~~vp~~f~i~~~~~~~a~V~Iy~DGSV~v~hgGiEmGQG 997 (1257)
T KOG0430|consen 918 ELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKRGLAMVPMKFGISFTGQAPALVHIYTDGTVVVTHGGIEMGQG 997 (1257)
T ss_pred CcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhcCceEeeeecceeccCCCceEEEEEcCCeEEEEECcEEcccc
Confidence 555669999999999999999999999999999999999999999999998765 8999999999999999999999999
Q ss_pred hhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 002015 621 LWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQAQMG 700 (981)
Q Consensus 621 ~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~~~~~~ 700 (981)
++|+++|+||..||| |.+.|++.+.||+..|++..|+||.++.+.|.||+.||+.|.+||.++..++.
T Consensus 998 L~TK~~Qvaa~~l~i--------p~~~v~v~~tsT~~v~na~~Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~~---- 1065 (1257)
T KOG0430|consen 998 LNTKVAQVAAYALGI--------PLSSVFVSETSTDKVPNASPTAASVSSDMYGAAVLDACETINARLEPVKSKHN---- 1065 (1257)
T ss_pred hhHHHHHHHHHHhCC--------cccceEEeecccccccCCCccccccccccccHHHHHHHHHHHHhhhhhhhhcC----
Confidence 999999999999999 99999999999999999999999999999999999999999999999987653
Q ss_pred CCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhhhhhcccc
Q 002015 701 SVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNLIYHLDR 780 (981)
Q Consensus 701 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (981)
..+|.+++.++|.+.+.|+++.+|.++++++.|+.||++++|
T Consensus 1066 ~~tw~~~i~~AY~q~V~LsAs~~~~~~g~~~~Y~~yG~a~sE-------------------------------------- 1107 (1257)
T KOG0430|consen 1066 FNTWEELIQAAYGQSINLSASDWYKPEGDMFPYLTYGAAASE-------------------------------------- 1107 (1257)
T ss_pred CccHHHHHHHHhhCccceeeeccccCCCCcccceeccceeEE--------------------------------------
Confidence 379999999999999999999999887777777777777666
Q ss_pred ccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeCCCCcccc
Q 002015 781 QIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVS 860 (981)
Q Consensus 781 ~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~G~~l~ 860 (981)
||||..||..+|+|.+++.|||..+||.++.|||||+|+||+|+.++||+.||++|++++
T Consensus 1108 --------------------VEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~~G~l~t 1167 (1257)
T KOG0430|consen 1108 --------------------VEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDPEGSLLT 1167 (1257)
T ss_pred --------------------EEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCCCceEee
Confidence 999999999999999999999999999999999999999999999999999998899999
Q ss_pred CCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCcccccC
Q 002015 861 EGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQSDLTFDLE 940 (981)
Q Consensus 861 ~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~ 940 (981)
.+.|+||||++.|||.+|+|.++...+++.+.|.+|++||||+..+++++.||.+||..|+.. ++...
T Consensus 1168 ~gt~~YKiP~~~dIP~~FrV~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~~------------~f~L~ 1235 (1257)
T KOG0430|consen 1168 NGTWTYKIPGAKDIPKDFRVELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARKD------------WFRLE 1235 (1257)
T ss_pred cCCCcccCCCcccCchheEeeeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhhc------------cccCC
Confidence 999999999999999999999995566888999999999999999999999999999999952 45689
Q ss_pred CCCCHHHHHHhcCCCcHHH
Q 002015 941 VPATVQVVKELCGPDSVEK 959 (981)
Q Consensus 941 lP~Tpe~v~~al~~~~~~~ 959 (981)
.|+|||+|+.+|+.+..+.
T Consensus 1236 ~PaTpe~i~~~c~~~~~~~ 1254 (1257)
T KOG0430|consen 1236 APATPERIRLACGDEFSEF 1254 (1257)
T ss_pred CCCCHHHHHHhhcchhhhh
Confidence 9999999999998754433
No 10
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=9.3e-153 Score=1399.58 Aligned_cols=708 Identities=23% Similarity=0.290 Sum_probs=615.6
Q ss_pred cccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCCCCcc
Q 002015 150 VRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKFGPEP 228 (981)
Q Consensus 150 ~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~~~~p 228 (981)
+|.|+.+|+||+++|++|+. +|||||++++|||++||||++||+|+|+ ||||++|+|++|+|. +.+......++|
T Consensus 2 ~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~---~~g~~~~~~d~~ 77 (746)
T TIGR03194 2 PLVDGVEKVTGKAKYTADLA-APGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPV---PYGVLPIAENEY 77 (746)
T ss_pred cCcchHhhCccccccccCCC-CCCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCc---ccCCCCCCCCCc
Confidence 68999999999999999997 6899999999999999999999999999 999999999999982 223222235889
Q ss_pred ccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCC--cc-cCCccc---ccccCChhh
Q 002015 229 LFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSF--FE-VPSFLY---PKSVGDISK 302 (981)
Q Consensus 229 ~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~--~~-~~~~~~---~~~~Gdve~ 302 (981)
+|+++||||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+ .++|+. ....||+++
T Consensus 78 ~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~~ 154 (746)
T TIGR03194 78 PLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEY--EEL-PAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVAA 154 (746)
T ss_pred cCCCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEE--ecC-CCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHhH
Confidence 999999999999999999999999999999999999 889 999999999998875 33 235652 457899999
Q ss_pred hcccCCeEEEEEEEEEccccccCCCCCeeEEEECC-CCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCC
Q 002015 303 GMNEADHKILSAEVKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGG 381 (981)
Q Consensus 303 af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~-dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~ 381 (981)
+|++|+++ ||++|++++|+|++|||++|+|+|++ +|+|+||+|||+||.+|..||++||||++||||+++++|||||+
T Consensus 155 a~~~a~~v-ve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~ 233 (746)
T TIGR03194 155 AFAEADLI-REKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGA 233 (746)
T ss_pred HhccCCEE-EEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCcccc
Confidence 99999986 99999999999999999999999985 57899999999999999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCC-chhH
Q 002015 382 KAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSP-NIPA 460 (981)
Q Consensus 382 K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~ 460 (981)
|... .++++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|+|+|.++++ .+..
T Consensus 234 K~~~-~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~ 312 (746)
T TIGR03194 234 RVEP-LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTILY 312 (746)
T ss_pred cccc-chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHHH
Confidence 9863 4567889999999999999999999999999999999999999999999999999999999999988775 3333
Q ss_pred hhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCC
Q 002015 461 YMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSA 540 (981)
Q Consensus 461 ~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~ 540 (981)
......++|+|||++++++.|+||++|+|+|||||.||+.||+|++||++|++|||||+|||+||++++++ .+++
T Consensus 313 ~~~~~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~~-----~~~~ 387 (746)
T TIGR03194 313 AGALLHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAPT-----VTMN 387 (746)
T ss_pred HHHhcCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCCC-----CCCC
Confidence 44456799999999999999999999999999999999999999999999999999999999999997653 4566
Q ss_pred CCcccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecC---------CCCceEEEEEeeCCcEEE
Q 002015 541 GELEEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVP---------LMSTPGKVSILSDGSVVV 610 (981)
Q Consensus 541 g~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~---------~~~~~a~v~l~~DG~v~v 610 (981)
|+.+++ ++++||++++++++|+++++.. +++||+|+++..++.+ ..++++.|+|++||+|+|
T Consensus 388 g~~~~s~~~~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v 459 (746)
T TIGR03194 388 DLRVMSYGLPECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITL 459 (746)
T ss_pred CceecCCCHHHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEEE
Confidence 877766 9999999999999998764321 1345666665655432 225889999999999999
Q ss_pred EecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 002015 611 EVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTP 690 (981)
Q Consensus 611 ~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~ 690 (981)
.+|++|||||++|+++||+||.||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||++
T Consensus 460 ~~g~~e~GqG~~T~~~qiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~ 531 (746)
T TIGR03194 460 LTGAADIGQGSSTIASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLVA 531 (746)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc------------------CCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeecccccccc
Q 002015 691 LRERLQAQM------------------GSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCF 752 (981)
Q Consensus 691 ~aa~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~ 752 (981)
+|+++++.+ ..++|.+++..++.....+...+.|..... +.+
T Consensus 532 ~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~---------------- 591 (746)
T TIGR03194 532 AAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPPE----FQG---------------- 591 (746)
T ss_pred HHHHHhCCCHHHEEEECCEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCCc----ccc----------------
Confidence 999887521 124555555332221222333333321000 000
Q ss_pred ccchhhhhhhhhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhh
Q 002015 753 SHFFAFKIFLLSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLG 832 (981)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~G 832 (981)
+.........+..|+|+||++|||||++||+|+|+|+++++|||++|||++++|
T Consensus 592 --------------------------~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~~~~~~D~G~viNP~~v~g 645 (746)
T TIGR03194 592 --------------------------GKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHKVWVAVDCGKAINPLAVEG 645 (746)
T ss_pred --------------------------ccccccccCcccccceeEEEEEEEEECCCCCEEEEEEEEEEeCCCcCCHHHHHH
Confidence 000000000113588999999999999999999999999999999999999999
Q ss_pred hhhhhHHhhHhHHhcccceeCCCCccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHH
Q 002015 833 QIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 912 (981)
Q Consensus 833 Qi~Ggi~qGiG~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~A 912 (981)
|||||++||||+||+|++.||+ |+++|.||+||+|||+.|+|+ |+++++|++ ++.+|||+||+||+++++ +++|
T Consensus 646 Qi~Gg~~~GiG~aL~E~~~~d~-G~~~~~~l~~Y~ipt~~d~P~-i~v~~ve~~-~~~~p~Gakg~GE~~~~~---~~~A 719 (746)
T TIGR03194 646 QVQGAVWMGMGQALSEETVYDN-GRMKHASLLDYRVPTIVESPD-IEVIIVESM-DPNGPFGAKEASEGALAG---FLPA 719 (746)
T ss_pred HHHHHHHHHHHHHhcCceEecC-CeECCCChhhccCCChhccCC-eEEEEEeCC-CCCCCCCCCcCCCCcccc---hHHH
Confidence 9999999999999999999985 999999999999999999995 999999976 678999999999999987 7889
Q ss_pred HHHHHHHHHHhhhcccccCCCCcccccCCCCCHHHHHHhc
Q 002015 913 TRAAIREARKQLLSWSQLDQSDLTFDLEVPATVQVVKELC 952 (981)
Q Consensus 913 I~nAi~~A~~~~~~~~~~~g~~~~~~~~lP~Tpe~v~~al 952 (981)
|+|||+||+| ++++++|+|||+||++|
T Consensus 720 IanAI~~A~G-------------~r~~~lP~tpe~v~~al 746 (746)
T TIGR03194 720 IHNAVYDAVG-------------VRATDLPLTPDRVTEAL 746 (746)
T ss_pred HHHHHHHhhC-------------CCcccCCCCHHHHHhhC
Confidence 9999999996 57889999999999875
No 11
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=1.6e-152 Score=1403.07 Aligned_cols=727 Identities=23% Similarity=0.314 Sum_probs=617.6
Q ss_pred ccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCc---cc
Q 002015 145 SAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNI---GS 220 (981)
Q Consensus 145 ~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~---~~ 220 (981)
.|++++|.|+.+|+||+++|++|+. +|||||++++|||++||||+|||+++|+ ||||++|+|++|+| +.+. +.
T Consensus 3 vG~~~~r~d~~~kvtG~~~Y~~D~~-~~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p--~~~~~~~~~ 79 (759)
T PRK09970 3 IGKSIMRVDAIAKVTGRAKYTDDYV-MAGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVP--DIPFPTAGH 79 (759)
T ss_pred CCCCCcCcchHHhCcCCccccccCC-CCCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcC--Ccccccccc
Confidence 5889999999999999999999997 7899999999999999999999999999 99999999999998 3322 10
Q ss_pred ------CCCCCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCC--cccCCcc
Q 002015 221 ------RTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSF--FEVPSFL 292 (981)
Q Consensus 221 ------~~~~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~--~~~~~~~ 292 (981)
.....++|+|+++||||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+..+|+
T Consensus 80 ~~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Vey--e~l-p~v~~~~~Al~~~a~~ih~~~~ni 156 (759)
T PRK09970 80 PWSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEY--EEL-PVITDPEAALAEGAPPIHNGRGNL 156 (759)
T ss_pred ccCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeE--EeC-CccCCHHHHhCCCCCccCCCCCce
Confidence 00113789999999999999999999999999999999999999 889 999999999988774 4212455
Q ss_pred c---ccccCChhhhcccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEE
Q 002015 293 Y---PKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVR 369 (981)
Q Consensus 293 ~---~~~~Gdve~af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVr 369 (981)
. ....||++++|++|+++ ||++|++++++|++|||++|+|+|+++|+|+||+|||+||.+|..+|++||||++|||
T Consensus 157 ~~~~~~~~Gd~~~a~~~a~~v-ve~~y~~~~~~h~~mEp~~~iA~~~~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~Vr 235 (759)
T PRK09970 157 LKQSTMSTGNVQQTIKAADYQ-VQGHYETPIVQHCHMENVTSYAYMEDDGRITIVSSTQIPHIVRRVVGQALGIPWGKVR 235 (759)
T ss_pred eeeeeeccCChhHhhccCCEE-EEEEEEECCEeEeccCCceEEEEECCCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEE
Confidence 3 36789999999999996 9999999999999999999999998768999999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCcccchHHHHHHHHHHhC-CCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeC
Q 002015 370 VITRRVGGGFGGKAIKAMPVATACALAAYKL-CRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDA 448 (981)
Q Consensus 370 V~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~-gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~ 448 (981)
|+.+++|||||+|.+. .. ++.||++|+++ ||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|+
T Consensus 236 V~~~~vGGgFG~K~~~-~~-~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~ 313 (759)
T PRK09970 236 VIKPYVGGGFGNKQDV-LE-EPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNT 313 (759)
T ss_pred EEeCCCCCCcCccccc-CH-HHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeecc
Confidence 9999999999999863 33 45677888888 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCch-hHhhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcC
Q 002015 449 GQYPDVSPNI-PAYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLH 527 (981)
Q Consensus 449 Gay~~~~~~~-~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~ 527 (981)
|+|.++++.+ ........++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||++
T Consensus 314 Gay~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~ 393 (759)
T PRK09970 314 GAYASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAA 393 (759)
T ss_pred ccCCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCC
Confidence 9998876533 334445679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCC-CCcccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCC-----CceEEE
Q 002015 528 THNSLNLFYESSA-GELEEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLM-----STPGKV 600 (981)
Q Consensus 528 ~~~~~~~~~~~~~-g~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~-----~~~a~v 600 (981)
++++. +++ |..+++ ++++||++++++++|++++++... . ..+++||+|+++..++.+.. .++++|
T Consensus 394 ~~g~~-----~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v 465 (759)
T PRK09970 394 REGDA-----NPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN--Q-QGNLRRGVGVACFSYTSGTWPVGLEIAGARL 465 (759)
T ss_pred CCCCc-----CCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh--h-cCCceEEEEEEEEEEeecCCCCCCCcceEEE
Confidence 87643 332 665555 999999999999999887654321 1 22456788887777765432 588999
Q ss_pred EEeeCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcC-CCCcccCCCCCccchhhhhHHHHHHH
Q 002015 601 SILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQA-DTLSVIQGGLTAGSTKSEASCQAVRN 679 (981)
Q Consensus 601 ~l~~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~-DT~~~p~~~gt~aSr~t~~~g~Av~~ 679 (981)
+|++||+|+|++|.+|||||++|+++||+||+||+ |+|+|+|..+ ||+.+|++++|+|||+|+++|+|+++
T Consensus 466 ~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~~ 537 (759)
T PRK09970 466 LMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGI--------PVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIRK 537 (759)
T ss_pred EEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9999999988 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhh
Q 002015 680 CCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFK 759 (981)
Q Consensus 680 Aa~~l~~~l~~~aa~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~ 759 (981)
||++||+||+++|+++++.. ...+.+..+.++...... ...+|...+.. .++.
T Consensus 538 Aa~~lr~~l~~~aa~~l~~~-------------~~~l~~~~G~v~~~~~~~-~~~~~~~la~~-------------a~~~ 590 (759)
T PRK09970 538 AALELKEKILAHAAVMLHQS-------------AMNLDIIDGHIVVKRPGE-PLMSLEELAMD-------------AYYH 590 (759)
T ss_pred HHHHHHHHHHHHHHHHhCCC-------------hHHEEEECCEEEECCCCC-ccccHHHHHHH-------------hhcc
Confidence 99999999999999887531 112223333332111000 00111110000 0000
Q ss_pred hhhhhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHH
Q 002015 760 IFLLSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFV 839 (981)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~ 839 (981)
. .....+.....+. .....|+|+||++|||||++||+++|+||++++|||++|||++++||||||++
T Consensus 591 -----~-~~~~~~~~~~~~~-------~~~~~~~~~a~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~ 657 (759)
T PRK09970 591 -----P-ERGGQITAESSIK-------TTTNPPAFGCTFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMG 657 (759)
T ss_pred -----c-cCCCceeEEEEec-------CCCCCCceEEEEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHH
Confidence 0 0000000000000 01125899999999999999999999999999999999999999999999999
Q ss_pred hhHhHHhcccceeCCC-CccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHH
Q 002015 840 QGIGFFMLEEYPTNSD-GLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIR 918 (981)
Q Consensus 840 qGiG~AL~Ee~~yd~~-G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~ 918 (981)
||||+||+|++.||++ |+++++||+||++|++.|+|+ |+++++|++ ++.+|||+||+||+++++ +++||+|||+
T Consensus 658 qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~P~-i~v~~ve~~-~~~~p~GaKgvGE~~~~~---~~~AIanAi~ 732 (759)
T PRK09970 658 MGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDLPQ-LESAFVEIY-EPQSAYGHKSLGEPPIIS---PAPAIRNAVL 732 (759)
T ss_pred HHHHHHhcceeEEcCCCCeECCCChhhccCCCcccCCC-eEEEEEecC-CCCCCCCCcccCCCcccc---hHHHHHHHHH
Confidence 9999999999999985 999999999999999999995 999999976 688999999999999987 7889999999
Q ss_pred HHHHhhhcccccCCCCcccccCCCCCHHHHHHhcCC
Q 002015 919 EARKQLLSWSQLDQSDLTFDLEVPATVQVVKELCGP 954 (981)
Q Consensus 919 ~A~~~~~~~~~~~g~~~~~~~~lP~Tpe~v~~al~~ 954 (981)
||+| ++++++|+|||+||++|+.
T Consensus 733 ~A~G-------------~r~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 733 MATG-------------VAINTLPMTPQRLFEEFKE 755 (759)
T ss_pred HhhC-------------CCcCCCCCCHHHHHHHHHh
Confidence 9996 5789999999999999865
No 12
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=1e-149 Score=1374.78 Aligned_cols=730 Identities=22% Similarity=0.288 Sum_probs=608.2
Q ss_pred Ccccccc-ccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCC-ccc
Q 002015 144 SSAEQVV-RLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQN-IGS 220 (981)
Q Consensus 144 ~~g~~~~-r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~-~~~ 220 (981)
.+|++++ |.|+.+|+||+++|++|++ +|||||++++|||++||||++||+|+|+ +|||++|+|++|+| +.+ .+.
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p--~~~~~g~ 78 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLR-FPGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVP--GLARFGI 78 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCC-CCCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCC--CCCCCCc
Confidence 3689999 9999999999999999997 7899999999999999999999999999 99999999999998 322 222
Q ss_pred CCCCCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCC--cccCCccc---cc
Q 002015 221 RTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSF--FEVPSFLY---PK 295 (981)
Q Consensus 221 ~~~~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~--~~~~~~~~---~~ 295 (981)
...++|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+ ++|+. ..
T Consensus 79 --~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~a~~~~a~~i~~-~~ni~~~~~~ 152 (768)
T TIGR03196 79 --IIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDY--EEL-APMDDPDKALQPDAEPLHE-AGNILHEAEF 152 (768)
T ss_pred --cCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEE--EeC-CCcCCHHHHhcCCCCeECC-CCcCcceeee
Confidence 235889999999999999999999999999999999999999 889 899999999987754 33 35553 35
Q ss_pred ccCChhhhcccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccC
Q 002015 296 SVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRV 375 (981)
Q Consensus 296 ~~Gdve~af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~v 375 (981)
..||++++|++|+++ ||++|++++++|++|||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||||+++++
T Consensus 153 ~~Gd~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~v 231 (768)
T TIGR03196 153 RHGDPDEGFAAGDTV-FEDQYELGMQDHAFLAPEAALAMPAADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGM 231 (768)
T ss_pred ccCCHhHHhccCCEE-EEEEEEeCCeeeeecCCceEEEEEcCCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCC
Confidence 789999999999996 9999999999999999999999999777899999999999999999999999999999999999
Q ss_pred CCCCCCCCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCC
Q 002015 376 GGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVS 455 (981)
Q Consensus 376 GGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~ 455 (981)
|||||+|... + .++.||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++
T Consensus 232 GGgFG~K~~~-~-~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~ 309 (768)
T TIGR03196 232 GGAFGGKDDL-N-IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLG 309 (768)
T ss_pred CCccCCcccc-c-HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCcc
Confidence 9999999863 3 3577899999999999999999999999999999999999999999999999999999999998876
Q ss_pred C-chhHhhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccc
Q 002015 456 P-NIPAYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNL 534 (981)
Q Consensus 456 ~-~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~ 534 (981)
+ ........+.++|+|||++++++.|+||++|+|+|||||.||+.||+|++||++|++|||||+|||+||++++++. +
T Consensus 310 ~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~-~ 388 (768)
T TIGR03196 310 PAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDL-G 388 (768)
T ss_pred HHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCc-C
Confidence 5 3333444567999999999999999999999999999999999999999999999999999999999999988753 2
Q ss_pred cccCCCCCcccCCHHHHHHHHHHhcCCh-----hhHHHHHHh-------hhcCCcceeecccccEEeecCCC-----C--
Q 002015 535 FYESSAGELEEYTIPLIWDRLAVSSSFN-----QRTEVIKEF-------NRSNLWRKKGISRVPIVYDVPLM-----S-- 595 (981)
Q Consensus 535 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~grGig~a~~~~~~~~~-----~-- 595 (981)
|++.+.+. ++++++||++++++++|+ ++......+ +.++ +++||+|+++..++.+.. +
T Consensus 389 ~~g~~~~~--~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~rGiG~a~~~~~~~~~~~~~~~~~ 465 (768)
T TIGR03196 389 PLEHRIAA--PDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECG-RLQRGTGAAIAMHGGGFGEGMDDAAV 465 (768)
T ss_pred CCCcccCC--cCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcC-CeeEEEEEEEEEecccCCCCccccCC
Confidence 33333221 247999999999999998 221111011 1123 245677777777665432 2
Q ss_pred ceEEEEEeeCCc--EEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhH
Q 002015 596 TPGKVSILSDGS--VVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEAS 673 (981)
Q Consensus 596 ~~a~v~l~~DG~--v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~ 673 (981)
+.+.|+|++||+ |+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++
T Consensus 466 ~~a~v~l~~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~ 537 (768)
T TIGR03196 466 AGARLELAEDGTVKIRAHFACAECGQGFLAAAEQIAMEELGC--------AAEDISIAIADTAKGPKAGSSSASRGTSMS 537 (768)
T ss_pred ccEEEEEeCCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCCCCCCCCCchhhhhHhH
Confidence 378999999996 8899999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHhhccceeeEe-------EEecCCCCccccccceeEEEeeecc
Q 002015 674 CQAVRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSAS-------SLYLPDFTSMKYLNYGAAVSEVSFS 746 (981)
Q Consensus 674 g~Av~~Aa~~l~~~l~~~aa~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~g~~~~e~~~~ 746 (981)
|+||++||++||+||+++++++++.+. ..+.+..+ .++...+.+....+|...+..
T Consensus 538 G~Av~~Aa~~l~~kl~~~aa~~l~~~~-------------~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~~---- 600 (768)
T TIGR03196 538 GGAIQGACAAFAAQLKARAAETAGLPA-------------EVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAAD---- 600 (768)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCh-------------hhEEEeCCeeeecccceeeecCCCcceEEHHHHhcc----
Confidence 999999999999999999887765311 11111111 111011100011222211100
Q ss_pred ccccccccchhhhhhhhhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccC
Q 002015 747 ISMDCFSHFFAFKIFLLSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLN 826 (981)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~IN 826 (981)
..+...+.+.... . ..++....++ .....|+|+||++|||||++||+|+|+|+++++|||++||
T Consensus 601 ~~~~~~~~~~~~~------~---~~~~~~~~~~-------~~~~~~~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iN 664 (768)
T TIGR03196 601 GPIAAETAFHDFP------T---SALDADVGQG-------DGHFAFAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLN 664 (768)
T ss_pred ccceeeeccccCC------C---cccccccccC-------CCcccccceEEEEEEEEECCCCcEEEEEEEEEEECCCccC
Confidence 0000000000000 0 0000000000 0123688999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHhhHhHHhcccceeCCCCccccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccch
Q 002015 827 PAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLA 906 (981)
Q Consensus 827 P~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~ 906 (981)
|.+++||||||++||||+||+|++.|| +|+++|.||+||++|++.|+|+ ++++++|++ ++.+|||+||+||+++++
T Consensus 665 p~~~~gQi~Gg~~~Gig~al~E~~~~~-~G~~~~~~~~~Y~~p~~~d~P~-~~~~~~~~~-~~~~p~G~kG~GE~~~~~- 740 (768)
T TIGR03196 665 PLALRGQIEGGAAMALGLALMEEAKMT-DGRVAAENFDDYLIPGIADVPD-LDFIAIEDL-MKDAPYGPKGVGEAGTCA- 740 (768)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCeEec-CCeECCCCcccccCCChhhCCC-eEEEEEeCC-CCCCCCCCccCcCccccc-
Confidence 999999999999999999999999996 7999999999999999999995 999999875 688999999999999988
Q ss_pred hhHHHHHHHHHHHHHHhhhcccccCCCCcccccCCCCCHHHHH
Q 002015 907 VSVHCATRAAIREARKQLLSWSQLDQSDLTFDLEVPATVQVVK 949 (981)
Q Consensus 907 ~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~lP~Tpe~v~ 949 (981)
+++||+|||+||+| +++++||+|||+|+
T Consensus 741 --~~~AianAi~~A~G-------------~r~~~lP~tpe~v~ 768 (768)
T TIGR03196 741 --ATPAIIAAIHDAVG-------------CDINKLPIRPEDLL 768 (768)
T ss_pred --hHHHHHHHHHHHhC-------------cCcccCCCChhhCC
Confidence 77899999999997 57889999999985
No 13
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.8e-136 Score=1118.24 Aligned_cols=729 Identities=33% Similarity=0.506 Sum_probs=653.9
Q ss_pred cccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCC
Q 002015 146 AEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKF 224 (981)
Q Consensus 146 g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~ 224 (981)
+.+.+-.....+++|.+.|+||+..|+|.||+++..|+.+||||+++|+++.+ .|||+.|+|++|+| |.|--. +..
T Consensus 20 ~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvP--GenDis-p~~ 96 (781)
T COG4631 20 GTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVP--GENDIS-PVK 96 (781)
T ss_pred cccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCC--CCCCCC-ccc
Confidence 44455455668899999999999888999999999999999999999999999 99999999999999 655311 225
Q ss_pred CCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCCcccCCcccccccCChhhhc
Q 002015 225 GPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGM 304 (981)
Q Consensus 225 ~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~~~~~~~~~~~~~Gdve~af 304 (981)
.|+|+|+++||.|+||||.+|+|+|+++|++|+.+.+||| |+| |+++|+.+|+..+.+.. ++ ...++||.+.+|
T Consensus 97 hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieY--e~l-p~~~di~~a~a~~~~v~-~p--~~l~rGD~~a~~ 170 (781)
T COG4631 97 HDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEY--EDL-PPVTDIDEAIAAGRLVT-PP--LTLKRGDAAAAL 170 (781)
T ss_pred CCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhccc--ccC-CccCCHHHHhhcccccC-Cc--hhhcccchhhhh
Confidence 6999999999999999999999999999999999999999 999 99999999998775432 11 247899999999
Q ss_pred ccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCCCCCc
Q 002015 305 NEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAI 384 (981)
Q Consensus 305 ~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG~K~~ 384 (981)
+.|.+. ++++++.+.|+|+|||.+.++|.+++||.++||+|||.|..+|..+|++||+|.+.|.|.+.++|||||||+.
T Consensus 171 ~~Ap~r-~~G~~~iGGQehFYLEgqia~a~p~Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEt 249 (781)
T COG4631 171 AAAPHR-LQGEMRIGGQEHFYLEGQIALAVPGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKET 249 (781)
T ss_pred hhCchh-heeeEEEcCeeeEEEeeeeeEeccCCCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccc
Confidence 999996 9999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCC-chhHhhh
Q 002015 385 KAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSP-NIPAYMI 463 (981)
Q Consensus 385 ~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~ 463 (981)
....+++.||++|++++||||+..+|.|||.+++|||++...|++|||.||||+++++.+..++|...++|. +++++++
T Consensus 250 Q~~~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlf 329 (781)
T COG4631 250 QANQFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALF 329 (781)
T ss_pred cchHHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccchhhhee
Confidence 888899999999999999999999999999999999999999999999999999999999999999999775 8899999
Q ss_pred ccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCCCCCc
Q 002015 464 GALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGEL 543 (981)
Q Consensus 464 ~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~~g~~ 543 (981)
++.+.|.+||+++.++..+||+.++++|||||.||+++++|++||++|..||+||+|+|++|++.++.. ..+|.++.
T Consensus 330 H~DNaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~---n~TpYhQ~ 406 (781)
T COG4631 330 HADNAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGR---NVTPYHQT 406 (781)
T ss_pred ccccceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCC---ccCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986542 12344555
Q ss_pred c-cCCHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCC-----CceEEEEEeeCCcEEEEeccccc
Q 002015 544 E-EYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLM-----STPGKVSILSDGSVVVEVGGIEL 617 (981)
Q Consensus 544 ~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~-----~~~a~v~l~~DG~v~v~~g~~d~ 617 (981)
. +..+.++++++...++|..|++++..||+..+..+|||++.+.++|+++. +.+|.|.|+.||||.+++|++||
T Consensus 407 Vednii~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNHGGTEM 486 (781)
T COG4631 407 VEDNIIARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHGGTEM 486 (781)
T ss_pred hHHhHHHHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcCCCccc
Confidence 3 44788999999999999999999999999999899999999999998763 58999999999999999999999
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002015 618 GQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQA 697 (981)
Q Consensus 618 GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~~~ 697 (981)
|||++|+++|++|++|+| +.++|++..++|+.+||...|.+|.++.+.|.|++.||++||+||..+|++-+.
T Consensus 487 GQGL~tKvaQVvA~~fqv--------d~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fAA~~~~ 558 (781)
T COG4631 487 GQGLYTKVAQVVAEEFQV--------DIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEHWG 558 (781)
T ss_pred ccchhHHHHHHHHHHhCc--------ccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999 999999999999999999999999999999999999999999999999998775
Q ss_pred c---------------cCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhh
Q 002015 698 Q---------------MGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFL 762 (981)
Q Consensus 698 ~---------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~ 762 (981)
. ...++|++++.++|...+.|++.++|..+.. -|.-.. ..+.++
T Consensus 559 V~~~~v~F~~n~vrig~~~~~F~~lv~~AY~arvqLsaaGFY~TPki-----hwdra~----------~~G~PF------ 617 (781)
T COG4631 559 VPEEDVAFLPNRVRIGGQELAFADLVKQAYFARVQLSAAGFYKTPKI-----HWDRAA----------GRGRPF------ 617 (781)
T ss_pred CCHHHeEecCCeeEEcceecCHHHHHHHHhheeeeeeccccccCCcc-----ccchhh----------cCCCce------
Confidence 4 1258999999999999999999999976421 110000 000000
Q ss_pred hhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhH
Q 002015 763 LSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGI 842 (981)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGi 842 (981)
.-|+|||.+.||+||+.||+.+|+|.++.||+|+.|||.+..|||||||+||+
T Consensus 618 ---------------------------yYFaYGAacSEV~vDtlTGey~~~R~DiLHDvG~SLNpaiDlGQiEGgFvQGm 670 (781)
T COG4631 618 ---------------------------YYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRSLNPAIDLGQIEGGFVQGM 670 (781)
T ss_pred ---------------------------EEEeecceeeeEEEecccceEEEEeehhhhhhhhhcccccccccccchhcccc
Confidence 12466666777999999999999999999999999999999999999999999
Q ss_pred hHHhcccceeCCCCccccCCCCCCCCCCCCCCCCceEEEEecCCCC-CCCCCCccccCCCCccchhhHHHHHHHHHHHHH
Q 002015 843 GFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHH-KKRVLSSKASGEPPLLLAVSVHCATRAAIREAR 921 (981)
Q Consensus 843 G~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~-~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~ 921 (981)
||-.+||+.||++|++.+..-+.||||++.|+|++|+|.+.+.+.+ +...+++|.+||||++.+.+|..||.+|+.. +
T Consensus 671 GWLTtEeL~wd~kGRlrThapSTYKiP~~sdrP~~f~V~L~~~~~n~e~ti~rSKAVGEPPlmL~iSV~~Al~~AvAs-v 749 (781)
T COG4631 671 GWLTTEELWWDEKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEPTIHRSKAVGEPPLMLGISVLEALSDAVAS-V 749 (781)
T ss_pred cccchhhheeccCCCeeecCCccccCcccccCchheeeehhccccccccccccccccCCCCcchhHHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999875433 3346999999999999988888898888863 3
Q ss_pred HhhhcccccCCCCcccccCCCCCHHHHHHhcC
Q 002015 922 KQLLSWSQLDQSDLTFDLEVPATVQVVKELCG 953 (981)
Q Consensus 922 ~~~~~~~~~~g~~~~~~~~lP~Tpe~v~~al~ 953 (981)
++. .....++.|+|||+|+.++.
T Consensus 750 aD~---------r~~p~ldaPATpErVlmave 772 (781)
T COG4631 750 ADY---------RVCPRLDAPATPERVLMAVE 772 (781)
T ss_pred ccc---------CcCCCCCCCCCHHHHHHHHH
Confidence 221 12445799999999999884
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=3.9e-124 Score=1143.12 Aligned_cols=720 Identities=26% Similarity=0.351 Sum_probs=610.4
Q ss_pred CccccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCC
Q 002015 144 SSAEQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRT 222 (981)
Q Consensus 144 ~~g~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~ 222 (981)
..|+++.|.|+..|+||+++|++|+. .|||+|+++||||++|++|++||.++|+ +|||++|+|++|+|. ..+.. ..
T Consensus 5 ~~gr~~~R~~~~~~vtG~~~y~~d~~-~~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~-~~~~~-~~ 81 (731)
T COG1529 5 IIGRSVLRADGLGKVTGKGRYADDIV-APGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPA-WSPVR-VE 81 (731)
T ss_pred cCCCCcccccchhheeeeeheehhhc-CCCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcc-ccccc-cc
Confidence 35888899999999999999999997 7899999999999999999999999999 999999999999983 01100 00
Q ss_pred CCCCccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhcCCCCcccCC-cc-cccccCCh
Q 002015 223 KFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPS-FL-YPKSVGDI 300 (981)
Q Consensus 223 ~~~~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~~~a~~~~~~-~~-~~~~~Gdv 300 (981)
..+...+|+.++|+|+|||||+|+|+|+++|++|+++|+|+| |+| |+++|+++++.++++..++. |+ ....+||.
T Consensus 82 ~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~y--e~l-~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~~ 158 (731)
T COG1529 82 LAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEY--EAL-PPVVDPEEALAEDAPVIHDELNIARDATFGDD 158 (731)
T ss_pred cCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeee--ccC-CCcCCHHHHhcCCCcccccccccccccccccc
Confidence 011122789999999999999999999999999999999999 999 99999999999876432122 33 34677888
Q ss_pred hhhcccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCCCCCC
Q 002015 301 SKGMNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFG 380 (981)
Q Consensus 301 e~af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGgFG 380 (981)
| +|++|+++ ++.+|.++++.|++|||++++++|+.+++||+|++||+|+.+|.+|+++|++|+++|||+++++|||||
T Consensus 159 ~-a~a~A~~~-v~~~~~~~~~~~~~~E~~g~~a~~~d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG 236 (731)
T COG1529 159 D-AFAAAAVV-VEAPYKTPRKDPNPMEPHGVVAVPDDGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFG 236 (731)
T ss_pred h-hhhcCcEE-eeeeeeccCcCccCcccccceeeEcCCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccC
Confidence 8 99999996 999999999999999999999999922389999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCCCCCch-h
Q 002015 381 GKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNI-P 459 (981)
Q Consensus 381 ~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~-~ 459 (981)
+|.. .++....++++|+++||||||+++|+|.|+.+.+|++...++++++++||+|++++.+++.|.|+|. +... .
T Consensus 237 ~K~~-~~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~~ 313 (731)
T COG1529 237 SKGV-VYVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVPA 313 (731)
T ss_pred Cccc-ceeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchhH
Confidence 9986 6677788889999999999999999999999899999999999999999999999999999999997 3333 3
Q ss_pred HhhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccCC
Q 002015 460 AYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESS 539 (981)
Q Consensus 460 ~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~~~~~~~~ 539 (981)
.....+.++|+|+|+++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|||++|+++.+.+.
T Consensus 314 ~~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~------ 387 (731)
T COG1529 314 AAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG------ 387 (731)
T ss_pred HHHHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC------
Confidence 34445679999999999999999999999999999999999999999999999999999999999999977442
Q ss_pred CCCcccC-CHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCCC-ceEEEEEeeCCcEEEEeccccc
Q 002015 540 AGELEEY-TIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMS-TPGKVSILSDGSVVVEVGGIEL 617 (981)
Q Consensus 540 ~g~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~~-~~a~v~l~~DG~v~v~~g~~d~ 617 (981)
.+..+++ +|.+|+++++++++|.++..+....++.+ ..+|+|++++.+.+...+ +.+.++++.||++++.+|.+++
T Consensus 388 ~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~--~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~g~~~~ 465 (731)
T COG1529 388 LGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGD--LRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRTGATDI 465 (731)
T ss_pred CcccccCccHHHHHHHHHHhcCcccccCChhhhhcCC--eeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEECCccC
Confidence 3445555 99999999999999976543333223222 356777777788777666 7799999999999999999999
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002015 618 GQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQA 697 (981)
Q Consensus 618 GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~~~ 697 (981)
|||++|+++|++||.||| |.|+|+|+.+||+..+.+++|+|||++.++++|+..||++|++|+...++++++
T Consensus 466 G~G~~t~~~q~~ae~lgi--------p~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~ 537 (731)
T COG1529 466 GQGTDTVLAQIAAEELGI--------PPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLG 537 (731)
T ss_pred CCcHHHHHHHHHHHHhCC--------CHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 999999999999999999 999999999999999999999999999999999999999999999999888763
Q ss_pred ccCCCCHHHHHHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhhhhhHHhhhhhhhhhc
Q 002015 698 QMGSVKWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFLLSSILEKRSLNLIYH 777 (981)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (981)
.+. ..+.+.........+......++...+.. .. ..++....
T Consensus 538 ~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~a~~-----------------------~~-~~~~~~~~- 579 (731)
T COG1529 538 ADA-------------EDVVLEDGAFKVGGGDRRSAVSLKEVAGK-----------------------GL-APGLAVAA- 579 (731)
T ss_pred CCh-------------hHeeeccCeeeeccCCccceeeHHHhhhc-----------------------cc-cCcccccc-
Confidence 211 11112221111111100000000000000 00 00000000
Q ss_pred cccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhHhHHhcccceeCCCCc
Q 002015 778 LDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGL 857 (981)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGiG~AL~Ee~~yd~~G~ 857 (981)
.......|+|+||+||||||++||++||+||++++|||++|||++++|||+||++||||+||+|+.+||++|+
T Consensus 580 -------~~~~~~~~~~~A~~~EV~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~ 652 (731)
T COG1529 580 -------SFGSDNTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQ 652 (731)
T ss_pred -------cccccccccceeEEEEEEEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCC
Confidence 0011237899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCceEEEEecCCCCCCCCCCccccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCccc
Q 002015 858 VVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLDQSDLTF 937 (981)
Q Consensus 858 ~l~~~~~dY~iP~~~DiP~~i~v~~~e~~~~~~gp~GaKGvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~ 937 (981)
++|.||.||.||++.|+|+ ++++++|+| ++.+|+|+||+||+++++ +++||+|||.+|+| .+
T Consensus 653 ~~~~n~~dY~ip~~~d~P~-iev~~v~~p-~~~~p~g~kGvGE~g~~~---~~pAvaNAV~~AtG-------------kr 714 (731)
T COG1529 653 LLNSNLADYGIPRAADAPE-VEVEFVESP-SPFGPLGAKGVGEGGIIG---IAPAIANAVFDATG-------------KR 714 (731)
T ss_pred cCCCCcccccCCCcccCCc-eEEEEecCC-CCCCCCCCCCcCcCccCc---hhHHHHHHHHHHhC-------------Cc
Confidence 9999999999999999997 999999998 888999999999999998 77899999999997 67
Q ss_pred ccCCCCCHHHHHHhcC
Q 002015 938 DLEVPATVQVVKELCG 953 (981)
Q Consensus 938 ~~~lP~Tpe~v~~al~ 953 (981)
+++||+||++||+++.
T Consensus 715 i~~lP~tp~~i~~al~ 730 (731)
T COG1529 715 IRDLPITPERILAALR 730 (731)
T ss_pred cccCCCCHHHHHHhhh
Confidence 8899999999999985
No 15
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=2.8e-109 Score=992.68 Aligned_cols=520 Identities=33% Similarity=0.439 Sum_probs=411.5
Q ss_pred ccccCChhhhcccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEec
Q 002015 294 PKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITR 373 (981)
Q Consensus 294 ~~~~Gdve~af~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~ 373 (981)
..++||+|++|++|+++ ||.+|++|+++|++|||++|+|+|+++|+|+||++||+|+.+|..||++||||++||||+.+
T Consensus 17 ~~~~GDve~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~V~~~ 95 (547)
T PF02738_consen 17 HIERGDVEAAFAEADHV-VEAEYRTPRQAHAPMEPHGAVAWWDEDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVRVISP 95 (547)
T ss_dssp EEEESSHHHHHHHTSEE-EEEEEEE-BB----SS-SEEEEEEETTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEEEEES
T ss_pred ccccCCHHHHHhhCCEE-EEEEEEECCccccCCCCCeEEEEEccCCCEEEEECCcCHhHHHHHHhhhhcCChhHEEEeee
Confidence 57899999999999996 99999999999999999999999996789999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccchHHHHHHHHHHhCCCcEEEEcCHHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEEeCCCCCC
Q 002015 374 RVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPD 453 (981)
Q Consensus 374 ~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~r~g~d~dG~i~a~~~~~~~d~Gay~~ 453 (981)
++|||||.|.. ...++++||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|.|+|..
T Consensus 96 ~~GGgFG~~~~-~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga~~~ 174 (547)
T PF02738_consen 96 YVGGGFGKKKQ-DSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGGAYAS 174 (547)
T ss_dssp B-S--TTTTSS-THHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEESS-T
T ss_pred ecCCCCCCccc-cchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCCcccc
Confidence 99999994433 56788999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCC-chhHhhhccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCc
Q 002015 454 VSP-NIPAYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSL 532 (981)
Q Consensus 454 ~~~-~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~kNl~~~~~~ 532 (981)
++. +.........++|+|||++++++.|+||++|.|+|||||.+|+.||+|++||++|++|||||+|||+||++++++
T Consensus 175 ~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~~~~- 253 (547)
T PF02738_consen 175 FSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLIDPGD- 253 (547)
T ss_dssp THHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-GTTE-
T ss_pred ccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhccccccc-
Confidence 765 444455566899999999999999999999999999999999999999999999999999999999999997653
Q ss_pred cccccCCCCCcccC-CHHH-HHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeecCCC-----CceEEEEEeeC
Q 002015 533 NLFYESSAGELEEY-TIPL-IWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLM-----STPGKVSILSD 605 (981)
Q Consensus 533 ~~~~~~~~g~~~~~-~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~~~~-----~~~a~v~l~~D 605 (981)
.++.|..+++ ++.+ ||+++++.++|++++++.+.++....|++||+|+++..++.+.. .+++.|+|++|
T Consensus 254 ----~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~D 329 (547)
T PF02738_consen 254 ----RTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPD 329 (547)
T ss_dssp ----B-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TT
T ss_pred ----ccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeC
Confidence 4566777766 8888 99999999999999877777766677889999998887776543 36899999999
Q ss_pred CcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHHHHHHHHHHHHH
Q 002015 606 GSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILV 685 (981)
Q Consensus 606 G~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~ 685 (981)
|+|+|.+|..|||||+.|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+|+++||++||
T Consensus 330 G~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi--------~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr 401 (547)
T PF02738_consen 330 GSVTVYTGGVEMGQGSRTALAQIAAEELGI--------PPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLR 401 (547)
T ss_dssp S-EEEEES--BSSSSHHHHHHHHHHHHHTS---------GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecccCCcchhhhHHHHHHHHhCC--------ChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc-CCCCHHHH--HHHHhhccceeeEeEEecCCCCccccccceeEEEeeeccccccccccchhhhhhh
Q 002015 686 ERLTPLRERLQAQM-GSVKWETL--IQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVSFSISMDCFSHFFAFKIFL 762 (981)
Q Consensus 686 ~~l~~~aa~~~~~~-~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~ 762 (981)
+||+++|+++++.+ ..+.|++- ........+.+.....+.....
T Consensus 402 ~~l~~~Aa~~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~--------------------------------- 448 (547)
T PF02738_consen 402 EKLLEIAAEILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPT--------------------------------- 448 (547)
T ss_dssp HHHHHHHHHHTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTST---------------------------------
T ss_pred HHHHHHHHHhcccccchhhhhhhcccccccccccccccccccccccc---------------------------------
Confidence 99999999998642 23334332 1111111111111100000000
Q ss_pred hhhHHhhhhhhhhhccccccccccccccccccceeeeEEEEEccCCcEEEEEEEEEeccCcccChhhhhhhhhhhHHhhH
Q 002015 763 LSSILEKRSLNLIYHLDRQIILPYCSTLKYIYGALMSQVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGI 842 (981)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVEVD~~TG~v~V~r~~~v~D~G~~INP~~v~GQi~Ggi~qGi 842 (981)
.++............|+|++|++|||||++||+|+|+|+++++|||++|||++++|||+||++|||
T Consensus 449 --------------~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~~Gl 514 (547)
T PF02738_consen 449 --------------GFDPGTGGYGPPASYYSFGAHFAEVEVDTETGEVRVLRVVAAHDCGRVINPDIVEGQIEGGIVQGL 514 (547)
T ss_dssp --------------TCETTTTEESBSSSEEEEEEEEEEEEEETTTSEEEEEEEEEEEEEBS-SBHHHHHHHHHHHHHHHH
T ss_pred --------------ccccccccccCCccceeeeeeecccccccccccccceeeeeeccCCcccCHHHHhhhccccHHHHH
Confidence 000000001122457999999999999999999999999999999999999999999999999999
Q ss_pred hHHhcccceeCCCCccccCCCCCCCCCCCCCCC
Q 002015 843 GFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIP 875 (981)
Q Consensus 843 G~AL~Ee~~yd~~G~~l~~~~~dY~iP~~~DiP 875 (981)
|+||+|++.||++|+++|+||+||++|++.|+|
T Consensus 515 g~al~E~~~~d~~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 515 GYALYEELVYDENGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp HHHHT--BEBTTTSEBSTSSTTTST---GGGS-
T ss_pred HHHhcCCeEECCCCcCCCCChhhCcCCCccccC
Confidence 999999999998899999999999999999998
No 16
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.95 E-value=7.4e-29 Score=235.05 Aligned_cols=107 Identities=42% Similarity=0.657 Sum_probs=88.2
Q ss_pred cceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCCCC--ccccCCCce
Q 002015 159 VGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKFGP--EPLFADELT 235 (981)
Q Consensus 159 tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~~~--~p~la~~~V 235 (981)
||+++|++|+. +|||||++++|||++||+|+|||+++|+ +|||++|+|++|+|..+.+.. .....+ +|+|++++|
T Consensus 1 TG~a~Y~~Di~-~~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~~~~~-~~~~~~~~~~~la~~~V 78 (111)
T PF01315_consen 1 TGEARYVDDIP-PPGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGINPNGG-LPIPHDEPQPVLADDKV 78 (111)
T ss_dssp TT-S-BGGGSC-STTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGSEESC-SCSTTSSEEESS-SSEE
T ss_pred CcCeEcccccC-CCCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccccCcc-ccccCCCceEeccCCeE
Confidence 79999999997 7899999999999999999999999999 999999999999994332221 112233 579999999
Q ss_pred eecCCcEEEEEeCCHHHHHHhcccceEEEccCCC
Q 002015 236 HCAGQPIAFVVADTQKIANRAADLAVVDYDVGNL 269 (981)
Q Consensus 236 ry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l 269 (981)
||+|||||+|||+|+++|++|+++|+||| |+|
T Consensus 79 ~y~GqpVa~VvAet~~~A~~Aa~~V~V~Y--e~l 110 (111)
T PF01315_consen 79 RYVGQPVALVVAETREAARDAAELVKVEY--EEL 110 (111)
T ss_dssp SSTT-EEEEEEESSHHHHHHHHHT-EEEE--EE-
T ss_pred eECCCeEEEEEECCHHHHHHHhcCcEEEe--EeC
Confidence 99999999999999999999999999999 877
No 17
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=99.91 E-value=5.6e-25 Score=214.76 Aligned_cols=87 Identities=36% Similarity=0.553 Sum_probs=80.1
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------EeeecccccCC----------------------
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVDAEKTHRP---------------------- 62 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~dg~~~~~~---------------------- 62 (981)
|+|+|||+++++ +++|+++|+||||++++|||+|.|| |+|||+++++|
T Consensus 2 i~~~vNG~~~~~-~~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlvdg~~v~SCl~~~~~~~G~~V~TiEgl~~~~ 80 (148)
T TIGR03193 2 LRLTVNGRWRED-AVADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLVDGRPRLACSTLAHRVAGRKVETVEGLATNG 80 (148)
T ss_pred EEEEECCEEEEe-ecCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEECCeEeeccHhhHhhcCCCcEEEeCCCCCCC
Confidence 789999999999 7999999999999999999999999 99999998753
Q ss_pred ------------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHh
Q 002015 63 ------------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101 (981)
Q Consensus 63 ------------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~ 101 (981)
.|||||+ +|+++||+++|+|||||||||++|++|+++++
T Consensus 81 ~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~~p~ps~~ei~~al~GnLCRCTGY~~I~~Av~~aa 148 (148)
T TIGR03193 81 RLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPSPSRDEIRAALAGNLCRCTGYVKIIESVEAAA 148 (148)
T ss_pred CCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHhC
Confidence 2689983 78999999999999999999999999998763
No 18
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=99.90 E-value=1.4e-24 Score=211.46 Aligned_cols=91 Identities=42% Similarity=0.635 Sum_probs=83.4
Q ss_pred eEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------EeeecccccCC--------------------
Q 002015 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVDAEKTHRP-------------------- 62 (981)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~dg~~~~~~-------------------- 62 (981)
+.|+|+|||+.+++ +++|+++|+|+|||+++|||+|.|| ||+||++|++|
T Consensus 2 ~~i~ltvNG~~~~~-~~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlvDG~~v~SCl~~a~~~~G~~ItTiEGl~~ 80 (156)
T COG2080 2 MPITLTVNGEPVEL-DVDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLVDGEAVNSCLTLAVQAEGAEITTIEGLAK 80 (156)
T ss_pred CcEEEEECCeEEEE-EeCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEECCeEehHHHHHHHHhCCCeEEEeecccC
Confidence 57899999999999 7999999999999999999999999 99999998752
Q ss_pred ---------------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHhhc
Q 002015 63 ---------------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFAAD 103 (981)
Q Consensus 63 ---------------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~~~ 103 (981)
.|||||+ .|+++||+++|+|||||||||.+|++|++.+++.
T Consensus 81 ~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~~~~ps~~eI~~~lsGnlCRCt~Y~~I~~Ai~~aa~~ 153 (156)
T COG2080 81 KDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPAPTDEEIREALSGNLCRCTGYQNIVAAILDAAER 153 (156)
T ss_pred CCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHhCCCCCHHHHHHHHhcCccccCCHHHHHHHHHHHHHH
Confidence 2688883 7999999999999999999999999999998754
No 19
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=99.90 E-value=7.4e-24 Score=208.98 Aligned_cols=89 Identities=39% Similarity=0.658 Sum_probs=79.7
Q ss_pred CeeEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------EeeecccccCC------------------
Q 002015 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVDAEKTHRP------------------ 62 (981)
Q Consensus 10 ~~~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~dg~~~~~~------------------ 62 (981)
..+.|+|+|||+.+++ +++|+++|+||||+. +|||+|.|| |||||+++++|
T Consensus 5 ~~~~i~~~vNG~~~~~-~~~~~~~Ll~~LR~~-gltgtK~GC~~G~CGACtVlvdg~~v~SCl~~a~~~~G~~V~TiEGl 82 (159)
T PRK09908 5 ETITIECTINGMPFQL-HAAPGTPLSELLREQ-GLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGE 82 (159)
T ss_pred CceeEEEEECCEEEEE-ecCCCCcHHHHHHHc-CCCCCCCCcCCCCCCCcEEEECCcEeehhHhhHHHhCCCEEEeecCC
Confidence 3457999999999999 799999999999985 999999999 99999998753
Q ss_pred ----------------------CCCCCCC---------C----CCHHHHHHHhhCCcccCCCCHHHHHHHHHH
Q 002015 63 ----------------------EPPPGFS---------K----LTISEAEKAIAGNLCRCTGYRPIADACKSF 100 (981)
Q Consensus 63 ----------------------~~~pG~~---------~----p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~ 100 (981)
.|||||+ + |+++||+++|+|||||||||++|++|++.+
T Consensus 83 ~~~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~~~~~~~s~~eI~~al~GNlCRCTGY~~I~~Av~~~ 155 (159)
T PRK09908 83 AKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDC 155 (159)
T ss_pred CCCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHH
Confidence 2689983 2 489999999999999999999999999876
No 20
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=99.89 E-value=1.1e-23 Score=207.54 Aligned_cols=89 Identities=33% Similarity=0.609 Sum_probs=81.9
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------EeeecccccCC---------------------
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVDAEKTHRP--------------------- 62 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~dg~~~~~~--------------------- 62 (981)
.|+|+|||+.+++ +++|+++|++|||++++|+|+|.|| |+|||+++++|
T Consensus 3 ~i~f~vNG~~~~~-~~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlvdG~~v~SCl~~~~~~~G~~v~TiEgl~~~ 81 (151)
T TIGR03198 3 QFRFTVNGQAWEV-AAVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDGKLANACLTMAYQADGHEITTIEGIAEN 81 (151)
T ss_pred cEEEEECCEEEEe-ecCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEECCcEEechHHHHHHhcCCEEEecCCcCCC
Confidence 5899999999999 7999999999999999999999999 99999998753
Q ss_pred ------------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHhh
Q 002015 63 ------------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFAA 102 (981)
Q Consensus 63 ------------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~~ 102 (981)
.|||||+ +|+++||+++|+|||||||||++|++|++++++
T Consensus 82 ~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~~p~p~~~ei~~al~gnlCRCtgY~~I~~Av~~~~~ 150 (151)
T TIGR03198 82 ELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQPSDEDMEEGLSGNLCRCTGYGGIIRSACRIRR 150 (151)
T ss_pred CCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCHHHHHHHHcCCCcCCCCCHHHHHHHHHHhc
Confidence 2689993 689999999999999999999999999998864
No 21
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=99.87 E-value=1.2e-22 Score=209.89 Aligned_cols=91 Identities=36% Similarity=0.614 Sum_probs=82.2
Q ss_pred eEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------EeeecccccCC--------------------
Q 002015 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVDAEKTHRP-------------------- 62 (981)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~dg~~~~~~-------------------- 62 (981)
..|+|+|||+.+++ +++|+++|+++||++++|||+|.|| |||||+++++|
T Consensus 50 ~~i~~~VNG~~~~~-~v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlVdG~~v~SCl~la~~~~G~~ItTiEGL~~ 128 (217)
T PRK11433 50 SPVTLKVNGKTEQL-EVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGS 128 (217)
T ss_pred ceEEEEECCEEEEE-ecCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEECCEEeeeeeeehhhcCCCEEEEeCCcCC
Confidence 57999999999999 7999999999999999999999999 99999987643
Q ss_pred --------------------CCCCCCC--------------------------CCCHHHHHHHhhCCcccCCCCHHHHHH
Q 002015 63 --------------------EPPPGFS--------------------------KLTISEAEKAIAGNLCRCTGYRPIADA 96 (981)
Q Consensus 63 --------------------~~~pG~~--------------------------~p~~~~i~~~l~gnlCRCtgY~~i~~A 96 (981)
.|||||+ +|+++||+++|+|||||||||++|++|
T Consensus 129 ~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p~pt~~eIrealsGNlCRCtgY~~Iv~A 208 (217)
T PRK11433 129 PDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPELTADEIRERMSGNICRCGAYSNILEA 208 (217)
T ss_pred CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccCccccccccccCCCCCHHHHHHHHcCCccCCCCcHHHHHH
Confidence 2789983 278999999999999999999999999
Q ss_pred HHHHhhc
Q 002015 97 CKSFAAD 103 (981)
Q Consensus 97 ~~~~~~~ 103 (981)
|+++++.
T Consensus 209 v~~~a~~ 215 (217)
T PRK11433 209 IEDVAGE 215 (217)
T ss_pred HHHHHhc
Confidence 9998754
No 22
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=99.80 E-value=4.3e-20 Score=215.94 Aligned_cols=88 Identities=43% Similarity=0.763 Sum_probs=79.0
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------Eee----ec-----ccccCC-------------
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLV----DA-----EKTHRP------------- 62 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~----dg-----~~~~~~------------- 62 (981)
|+|+|||+.+++++++|+++|++|||+++||||||.|| |+| || ++|++|
T Consensus 1 i~~~~Ng~~~~~~~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~ 80 (467)
T TIGR02963 1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGGKLRYRSVNACIQFLPSLDGKAVV 80 (467)
T ss_pred CEEEECCEEEEeecCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCCcccceEEehhhhhHHhcCCCEEE
Confidence 57999999999856999999999999999999999999 999 99 887653
Q ss_pred ----------------------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHh
Q 002015 63 ----------------------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101 (981)
Q Consensus 63 ----------------------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~ 101 (981)
.|||||+ +|+++||+++|+|||||||||++|++|+..++
T Consensus 81 TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 158 (467)
T TIGR02963 81 TVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAPSRADIEDALQGNLCRCTGYRPILDAAEAAF 158 (467)
T ss_pred ecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhcCCCCCHHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence 2689983 68999999999999999999999999996553
No 23
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=99.79 E-value=9.9e-20 Score=196.04 Aligned_cols=92 Identities=47% Similarity=0.792 Sum_probs=78.3
Q ss_pred eeEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------Eee----eccc-----ccC-----------
Q 002015 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLV----DAEK-----THR----------- 61 (981)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~----dg~~-----~~~----------- 61 (981)
+.+|+|.+||+.+.+.+++|..|||||||.+.+|||||+|| ||| +|.. |++
T Consensus 6 ~~~irf~lN~~~~~l~~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl~~g~~l~yeSVNACirfl~sL~G~ 85 (493)
T COG4630 6 RNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLVDGGSLRYESVNACIRFLGSLDGT 85 (493)
T ss_pred cceeEEEecCceEEeecCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEeecCCCceeeeehhHHHHHHhhcCCc
Confidence 56899999999999999999999999999889999999999 544 3321 111
Q ss_pred ------------------------------CCCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHH
Q 002015 62 ------------------------------PEPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSF 100 (981)
Q Consensus 62 ------------------------------~~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~ 100 (981)
..|||||+ .|+++.|.++|.|||||||||++|++|...+
T Consensus 86 hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~~~~P~~a~i~kALqGNLCRCTGY~pI~~AA~~~ 165 (493)
T COG4630 86 HVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMNSPTPSRAAIEKALQGNLCRCTGYRPIIRAAEAI 165 (493)
T ss_pred eEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhcCCCCchhHHHHHhhCCcccccCchHHHHHHHHH
Confidence 13799995 6999999999999999999999999999876
Q ss_pred hh
Q 002015 101 AA 102 (981)
Q Consensus 101 ~~ 102 (981)
+.
T Consensus 166 ~a 167 (493)
T COG4630 166 AA 167 (493)
T ss_pred hc
Confidence 54
No 24
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.51 E-value=3.2e-15 Score=184.51 Aligned_cols=468 Identities=15% Similarity=0.093 Sum_probs=273.8
Q ss_pred ccccccCccccccceeeeeecCCCCCCeEEEEEccCCCCCeEEEeEecCCCC-CCCEEEEEEccCCCcCCCCcccCCCCC
Q 002015 147 EQVVRLSREYFPVGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKS-LPGVSAFLSYKDIPEAGQNIGSRTKFG 225 (981)
Q Consensus 147 ~~~~r~~~~~~~tG~a~Y~~Di~~~pgmL~a~vvrSp~a~arI~sID~s~A~-~pGVv~V~T~~D~p~~g~~~~~~~~~~ 225 (981)
...+| ++. ++|+.+.|..|.. .++||+..+.+++..-..|.+ |...+. .++++.+.-.
T Consensus 188 ~a~~~-d~~-~lt~~~~tQ~~~~-~~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~~----------------- 246 (731)
T COG1529 188 VAVPD-DGD-KLTVWASTQIPHR-LRGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEI----------------- 246 (731)
T ss_pred eeeEc-CCC-eEEEEEccCCchH-HHHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHHH-----------------
Confidence 44556 555 9999999999997 689999999955555555555 888777 7776443321
Q ss_pred CccccCCCceeecCCcEEEEEeCCHHHHHHhcccceEEEccCCCCCCCCCHHHHhc-CCCCcccCCcccccccCC-----
Q 002015 226 PEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVG-RSSFFEVPSFLYPKSVGD----- 299 (981)
Q Consensus 226 ~~p~la~~~Vry~G~pVA~VvAe~~~~A~~A~~lI~Vey~~e~l~p~v~d~~~Al~-~~a~~~~~~~~~~~~~Gd----- 299 (981)
++--...-.|-||.++-..++... .. +.-.+...+..-+.+ ++.+....... ....|+
T Consensus 247 ----~~~~aa~~~grpVk~~~tR~e~~~---------~~--~~~~~~~~~~~~~a~~dg~l~~~~~~~-~~~~Gay~~~~ 310 (731)
T COG1529 247 ----LAALAAVVAGRPVKWIETREELFV---------AT--GHRRATLIDVKLGADKDGRLLAIKGTV-AADTGAYNGPT 310 (731)
T ss_pred ----HHHHHHHhcCCCeEEecchHHhhh---------cc--CCCCCceEEeeeecCcCCcEEeeeeeE-EecCCCccccc
Confidence 111111222344544443333222 21 111011111111111 11110000000 112222
Q ss_pred hhhh---cccCCeEEEEEEEEEccccccCCCCCeeEEEECCCCeEEEEeCCCChHHHHHHHHHHhCCCCceEEEEeccCC
Q 002015 300 ISKG---MNEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVG 376 (981)
Q Consensus 300 ve~a---f~~A~~vvve~~y~~~~~~h~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~lA~~Lglp~~kVrV~~~~vG 376 (981)
+... .....+. ++..|..++..|..||| ++..+..++. ..||.+...++.||+.|||++.+||++...-+
T Consensus 311 ~~~~~~~~~~g~Y~-i~~~~~~~~~v~tn~~p-~~~~Rg~g~~-----~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~ 383 (731)
T COG1529 311 VPAAAAGLARGPYK-IEAVYIEPYLVHTNMPP-NGAYRGAGRP-----EGTFALERAVDELAEELGIDPVEIRLRNLIRG 383 (731)
T ss_pred hhHHHHHhcCCcee-cccceeeeEEEEcCCCC-CcccccCCCc-----hhHHHHHHHHHHHHHHhCCCHHHHhhhhcccc
Confidence 2222 2333455 89999999999999999 6666654332 89999999999999999999999999999999
Q ss_pred CCCC-CCCcccchHHHHHHHHHHhCC---CcEEEEcCHHHHHhhcCCCCceE--------EEEEEEeCCCCcEEEEEEEE
Q 002015 377 GGFG-GKAIKAMPVATACALAAYKLC---RPVRIYVNRKTDMVMAGGRHPMK--------IEYNVGFKSNGKITALQLNI 444 (981)
Q Consensus 377 GgFG-~K~~~~~~~~~~aAlaA~~~g---RPVkl~~sR~E~~~~~~~R~~~~--------~~~r~g~d~dG~i~a~~~~~ 444 (981)
|+|| ++-.....+...+..++++.+ ||+|+.|+|+++++....+.-.. ...++-++.||++.......
T Consensus 384 g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~g~~ 463 (731)
T COG1529 384 GPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRTGAT 463 (731)
T ss_pred CCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEECCc
Confidence 9999 443323334444556778776 99999999999977533332221 22445556677776543322
Q ss_pred EEeCCCCCCCCCchhHhh-hccCCCcccccEEEEEEEeecCCCcccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 002015 445 LIDAGQYPDVSPNIPAYM-IGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRS 523 (981)
Q Consensus 445 ~~d~Gay~~~~~~~~~~~-~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~ 523 (981)
+++......+ ....-.|.||+-+++.....|..+ ..+||.+|+..+.|+.|.+++++++..+.||..+|+
T Consensus 464 --------~~G~G~~t~~~q~~ae~lgip~~~V~v~~gDt~~~-~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~ 534 (731)
T COG1529 464 --------DIGQGTDTVLAQIAAEELGIPPDDVEVVHGDTDVP-VGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAAR 534 (731)
T ss_pred --------cCCCcHHHHHHHHHHHHhCCCHHHEEEEecCCCCC-CCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 1222122111 122457899988888888888755 488999999999999999999999999999999999
Q ss_pred hhcCCCCCccccccCCCCCcccCCHHHHHHHHHHhcCChhhHHHHHHhhhcCCcceeecccccEEeec---CCCCceEEE
Q 002015 524 INLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDV---PLMSTPGKV 600 (981)
Q Consensus 524 kNl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~grGig~a~~~~~~---~~~~~~a~v 600 (981)
..-.+.++. .++.......|..+..........+.-+..|+.+....... ++...-+.|
T Consensus 535 ~l~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~A~~~EV 596 (731)
T COG1529 535 MLGADAEDV------------------VLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAASFGSDNTYPYGAHIAEV 596 (731)
T ss_pred hhCCChhHe------------------eeccCeeeeccCCccceeeHHHhhhccccCcccccccccccccccceeEEEEE
Confidence 873322211 22333334445321100000000011133566654322111 133467899
Q ss_pred EEe-eCCcEEEE--ecccccCCchhhHH--HHH-------HHHHhcc--cc----------------cCCCCCCCCcEEE
Q 002015 601 SIL-SDGSVVVE--VGGIELGQGLWTKV--KQM-------AAFALSS--IQ----------------CGGMGDLLETVRV 650 (981)
Q Consensus 601 ~l~-~DG~v~v~--~g~~d~GQG~~T~~--aqi-------aAe~Lgi--~~----------------~~~~~~~~e~V~v 650 (981)
+++ .+|++.|. ....|.|.=++-.+ .|+ ++.+|-= .. +.... .-+|+|
T Consensus 597 ~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d--~P~iev 674 (731)
T COG1529 597 EVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAAD--APEVEV 674 (731)
T ss_pred EEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCccc--CCceEE
Confidence 999 59988887 78889998776654 343 2222210 00 00111 122554
Q ss_pred EcCCC--CcccCCCCCccchhhhhHHHHHHHHHHHHHHH
Q 002015 651 IQADT--LSVIQGGLTAGSTKSEASCQAVRNCCKILVER 687 (981)
Q Consensus 651 ~~~DT--~~~p~~~gt~aSr~t~~~g~Av~~Aa~~l~~~ 687 (981)
..-++ ...|++....|--++.-...|+.+|-.++-.+
T Consensus 675 ~~v~~p~~~~p~g~kGvGE~g~~~~~pAvaNAV~~AtGk 713 (731)
T COG1529 675 EFVESPSPFGPLGAKGVGEGGIIGIAPAIANAVFDATGK 713 (731)
T ss_pred EEecCCCCCCCCCCCCcCcCccCchhHHHHHHHHHHhCC
Confidence 44443 23455666666666677777777777666443
No 25
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.15 E-value=7.2e-12 Score=109.52 Aligned_cols=36 Identities=50% Similarity=0.918 Sum_probs=30.5
Q ss_pred CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHH
Q 002015 63 EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACK 98 (981)
Q Consensus 63 ~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~ 98 (981)
.|||||+ +|+++||+++|+|||||||||++|++||+
T Consensus 28 fCtpG~im~~~~ll~~~~~p~~~ei~~al~gnlCRCTgY~~I~~Av~ 74 (75)
T PF01799_consen 28 FCTPGMIMAAYALLRRNPDPTEEEIREALSGNLCRCTGYRPIVEAVR 74 (75)
T ss_dssp SSHHHHHHHHHHHHHHSSS-CHHHHHHHTTTS--SSSTSHHHHHHHH
T ss_pred cchHHHHHHHHHHhhcccchhhHHHHHHHHcCccCCCCcHHHHHHHh
Confidence 5899983 69999999999999999999999999997
No 26
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=92.22 E-value=0.12 Score=56.33 Aligned_cols=40 Identities=13% Similarity=0.307 Sum_probs=35.4
Q ss_pred EEEEeccCCCCCchHHHHhcCCCC-----cCCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVDPSTTLLEFLRYHTRF-----KSVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR~~~~l-----~g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ +++++++||++||+ ++. ++.|.|| |+|||+++.+|
T Consensus 20 q~y~v-~~~~~~tvLd~L~~-i~~~~d~~l~~r~~C~~g~CGsCa~~InG~p~laC 73 (251)
T PRK12386 20 QDYTV-EVNEGEVVLDVIHR-LQATQAPDLAVRWNCKAGKCGSCSAEINGRPRLMC 73 (251)
T ss_pred EEEEE-eCCCCCCHHHHHHH-hccccCCCCcccCCCCCCcCCCCEEEECccEeccH
Confidence 66788 68999999999998 787 4999999 99999998875
No 27
>PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=91.71 E-value=0.31 Score=43.83 Aligned_cols=53 Identities=28% Similarity=0.373 Sum_probs=35.7
Q ss_pred eEEEEEECCEEEEeccCCCCCchHHHHhcCCCCc--------------CCCcCc----Eeeeccc-ccCCC--CCCCC
Q 002015 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK--------------SVKLGC----VLVDAEK-THRPE--PPPGF 68 (981)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~--------------g~k~gC----vl~dg~~-~~~~~--~~pG~ 68 (981)
..|+|+|||+++++ .++++|+++|+.. |+. +....| |.+||++ +.+|. ..+||
T Consensus 2 ~~v~i~idG~~v~~---~~G~til~al~~~-gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev~g~~~v~AC~t~v~~GM 75 (82)
T PF13510_consen 2 KMVTITIDGKPVEV---PPGETILEALLAA-GIDIPRLCYHGRPRGGLCPIGSCRLCLVEVDGEPNVRACSTPVEDGM 75 (82)
T ss_dssp EEEEEEETTEEEEE---EET-BHHHHHHHT-T--B-EETTTS-EEBSSSSSTT-SS-EEEESSEEEEETTT-B--TTE
T ss_pred CEEEEEECCEEEEE---cCCCHHHHHHHHC-CCeEEEeeeccCcccccCCccccceEEEEECCCcceEcccCCCcCCc
Confidence 47999999999987 4899999999874 222 112333 8999998 77664 24666
No 28
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=87.28 E-value=5.5 Score=50.70 Aligned_cols=60 Identities=23% Similarity=0.289 Sum_probs=48.3
Q ss_pred CCCCCeeEEEECCCCeEEEEeCCCC----h-HHHHHHHHHHhCCCCceEEEEe-------ccCCCCCCCCCc
Q 002015 325 YMETQTALAVPDEDNCLVVYSSIQC----P-EYAHATIARCLGIPEHNVRVIT-------RRVGGGFGGKAI 384 (981)
Q Consensus 325 ~mEp~~avA~~~~dg~l~V~~stQ~----p-~~~r~~lA~~Lglp~~kVrV~~-------~~vGGgFG~K~~ 384 (981)
.+++..+....+.||.++|++++.- . ..+.+.+|+.||+|.++|+|+. |+-+|.||++..
T Consensus 457 ~~~~~~a~v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t 528 (759)
T PRK09970 457 GLEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQS 528 (759)
T ss_pred CCCcceEEEEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhH
Confidence 3667778888888999999999843 3 4557888999999999999994 456788998864
No 29
>COG2104 ThiS Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism]
Probab=83.08 E-value=2 Score=37.27 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=34.2
Q ss_pred eEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-EeeecccccC
Q 002015 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTHR 61 (981)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~~ 61 (981)
+.|++.+||+.++. +..+||.|+|++ +++.. .++ |.+||+.++.
T Consensus 1 ~~m~i~~ng~~~e~---~~~~tv~dLL~~-l~~~~--~~vav~vNg~iVpr 45 (68)
T COG2104 1 MPMTIQLNGKEVEI---AEGTTVADLLAQ-LGLNP--EGVAVAVNGEIVPR 45 (68)
T ss_pred CcEEEEECCEEEEc---CCCCcHHHHHHH-hCCCC--ceEEEEECCEEccc
Confidence 36789999999986 344999999975 67643 667 8889998874
No 30
>PRK06083 sulfur carrier protein ThiS; Provisional
Probab=82.22 E-value=2.6 Score=38.17 Aligned_cols=49 Identities=16% Similarity=0.377 Sum_probs=37.1
Q ss_pred cccCCeeEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 6 QDRGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 6 ~~~~~~~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
-+....+.|+++|||+.+++ +...+|.++|.. +++ -..++ |-+||+-++
T Consensus 11 ~~~~~~~~m~I~VNG~~~~~---~~~~tl~~LL~~-l~~--~~~~vAVevNg~iVp 60 (84)
T PRK06083 11 TEGAAMVLITISINDQSIQV---DISSSLAQIIAQ-LSL--PELGCVFAINNQVVP 60 (84)
T ss_pred ccCCCCceEEEEECCeEEEc---CCCCcHHHHHHH-cCC--CCceEEEEECCEEeC
Confidence 34556678999999999876 467899999974 565 34677 788988775
No 31
>PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions. Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A ....
Probab=81.48 E-value=1.2 Score=39.11 Aligned_cols=34 Identities=29% Similarity=0.477 Sum_probs=28.3
Q ss_pred EEECCEEEEeccCCCCCc-hHHHHhcCCCCcCCCcCc
Q 002015 16 FAVNGEKFEVSSVDPSTT-LLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 16 ~~vNg~~~~~~~~~~~~~-L~~~LR~~~~l~g~k~gC 51 (981)
+++||+.+++ ++.++++ |+++|++. +-.++..+|
T Consensus 1 i~i~g~~~~~-~~~~~~~~ll~~~~~~-~gi~i~~~C 35 (78)
T PF00111_consen 1 ITINGKGVTV-EVPPGETLLLDALERA-GGIGIPYSC 35 (78)
T ss_dssp EETTTEEEEE-EEETTSBBHHHHHHHT-TTTTSTTSS
T ss_pred CEECCeEEEE-EeCCCccHHHHHHHHc-CCCCcccCC
Confidence 4789999999 6989999 99999974 345888888
No 32
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=81.18 E-value=3.1 Score=53.03 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=50.8
Q ss_pred CeeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEec------cCCCCCCCCCcccchHHHHHHHHH
Q 002015 329 QTALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVITR------RVGGGFGGKAIKAMPVATACALAA 397 (981)
Q Consensus 329 ~~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~~------~vGGgFG~K~~~~~~~~~~aAlaA 397 (981)
..+....+.||+++|+++++.. ..+.+.+|+.||+|.++|+|+.. +-+|.||++... ..-.++-.||
T Consensus 476 ~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~--~~G~Av~~Aa 553 (770)
T TIGR02416 476 DSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTP--VAGAATALAA 553 (770)
T ss_pred ceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHH--HHHHHHHHHH
Confidence 4577778888999999998654 45677889999999999999955 446788888642 2233334455
Q ss_pred HhC
Q 002015 398 YKL 400 (981)
Q Consensus 398 ~~~ 400 (981)
+++
T Consensus 554 ~~l 556 (770)
T TIGR02416 554 RKI 556 (770)
T ss_pred HHH
Confidence 555
No 33
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=78.63 E-value=3.1 Score=52.88 Aligned_cols=59 Identities=8% Similarity=0.036 Sum_probs=46.0
Q ss_pred CCCCeeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEe------ccCCCCCCCCCc
Q 002015 326 METQTALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVIT------RRVGGGFGGKAI 384 (981)
Q Consensus 326 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~------~~vGGgFG~K~~ 384 (981)
+.+..+....+.||+++|+++++.. ..+.+.+|+.||+|.++|+|.. |.-+|.+|++..
T Consensus 445 ~~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t 514 (758)
T TIGR02965 445 LNQAGALVHVYTDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGS 514 (758)
T ss_pred cCccceEEEEeCCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHH
Confidence 3455677777888999999998653 3456778999999999999985 456777888864
No 34
>PRK08364 sulfur carrier protein ThiS; Provisional
Probab=77.46 E-value=4.2 Score=35.38 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=33.9
Q ss_pred EEEEEECCE--EEEeccCCCCCchHHHHhcCCCCcCCCcCc-EeeecccccC
Q 002015 13 SVVFAVNGE--KFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTHR 61 (981)
Q Consensus 13 ~i~~~vNg~--~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~~ 61 (981)
.|+++|||+ +.+. ++++++|+.++|+ +|++.. .+| |.+||+.+..
T Consensus 4 mm~v~vng~~~~~~~-~~~~~~tv~~ll~-~l~~~~--~~v~v~vNg~iv~~ 51 (70)
T PRK08364 4 MIRVKVIGRGIEKEI-EWRKGMKVADILR-AVGFNT--ESAIAKVNGKVALE 51 (70)
T ss_pred EEEEEEeccccceEE-EcCCCCcHHHHHH-HcCCCC--ccEEEEECCEECCC
Confidence 489999999 4455 4677899999996 467743 567 7889998753
No 35
>PRK07440 hypothetical protein; Provisional
Probab=77.38 E-value=4.5 Score=35.23 Aligned_cols=42 Identities=26% Similarity=0.309 Sum_probs=32.2
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
.|+++|||+.+++ +..++|.++|++ +++ ...+. |-+||+-++
T Consensus 4 ~m~i~vNG~~~~~---~~~~tl~~lL~~-l~~--~~~~vav~~N~~iv~ 46 (70)
T PRK07440 4 PITLQVNGETRTC---SSGTSLPDLLQQ-LGF--NPRLVAVEYNGEILH 46 (70)
T ss_pred ceEEEECCEEEEc---CCCCCHHHHHHH-cCC--CCCeEEEEECCEEeC
Confidence 5899999999876 467899999974 676 33556 777888765
No 36
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=77.38 E-value=4.3 Score=52.73 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=48.0
Q ss_pred CCCCeeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEec------cCCCCCCCCCc
Q 002015 326 METQTALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVITR------RVGGGFGGKAI 384 (981)
Q Consensus 326 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~~------~vGGgFG~K~~ 384 (981)
+++..+....+.||.++|+++++.. ..+.+.+|+.||+|.++|+|+.. +-+|.||++..
T Consensus 658 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t 727 (951)
T TIGR03313 658 IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGT 727 (951)
T ss_pred CCCccEEEEEcCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHH
Confidence 4567777788889999999999854 56688899999999999999964 44778888864
No 37
>cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.
Probab=77.05 E-value=2 Score=38.15 Aligned_cols=35 Identities=31% Similarity=0.470 Sum_probs=29.0
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC 51 (981)
|+|+.||...++ +++++++|+++|++ .|+. +..+|
T Consensus 1 v~~~~~~~~~~~-~~~~g~~ll~al~~-~g~~-~~~~C 35 (84)
T cd00207 1 VTINVPGSGVEV-EVPEGETLLDAARE-AGID-IPYSC 35 (84)
T ss_pred CEEecCCCCEEE-EECCCCcHHHHHHH-cCCC-cccCC
Confidence 478888777888 68999999999998 5775 77888
No 38
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=77.05 E-value=5.9 Score=51.51 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=47.6
Q ss_pred CCCCeeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEec------cCCCCCCCCCc
Q 002015 326 METQTALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVITR------RVGGGFGGKAI 384 (981)
Q Consensus 326 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~~------~vGGgFG~K~~ 384 (981)
+++..+....+.||.++|+++++.. ..+.+.+|+.||+|.++|+|+.. .-+|.||++..
T Consensus 662 ~~~~~a~v~l~~dGsv~v~~g~~e~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~gt~aSr~t 731 (956)
T PRK09800 662 IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGT 731 (956)
T ss_pred CCCceEEEEECCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCceeEEEEeCCCCCCCCCCCcchhhhH
Confidence 4566677777889999999998744 45678889999999999999964 45778888864
No 39
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=75.94 E-value=4.7 Score=51.18 Aligned_cols=73 Identities=22% Similarity=0.219 Sum_probs=52.5
Q ss_pred CCCCeeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEecc------CCCCCCCCCcccchHHHHHH
Q 002015 326 METQTALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVITRR------VGGGFGGKAIKAMPVATACA 394 (981)
Q Consensus 326 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~~~------vGGgFG~K~~~~~~~~~~aA 394 (981)
..+..+....+.||.++|+++++.. ..+++.+|+.||+|.++|+|...+ -+|.+|++.. +..--++-
T Consensus 442 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t--~~~G~Av~ 519 (746)
T TIGR03194 442 EPHATVALKLDFDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT--FMVGNAAI 519 (746)
T ss_pred CCCceEEEEEcCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH--HHHHHHHH
Confidence 3356777778889999999887644 456788899999999999999655 5677888864 22333334
Q ss_pred HHHHhC
Q 002015 395 LAAYKL 400 (981)
Q Consensus 395 laA~~~ 400 (981)
.+|+++
T Consensus 520 ~Aa~~l 525 (746)
T TIGR03194 520 DAAEEL 525 (746)
T ss_pred HHHHHH
Confidence 455555
No 40
>PRK05863 sulfur carrier protein ThiS; Provisional
Probab=74.70 E-value=5.2 Score=34.22 Aligned_cols=41 Identities=34% Similarity=0.388 Sum_probs=31.1
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
++++|||+.+++ ++.+||.++|.. +++ ...++ |.+|++.++
T Consensus 1 m~i~vNG~~~~~---~~~~tl~~ll~~-l~~--~~~~vav~~N~~iv~ 42 (65)
T PRK05863 1 MIVVVNEEQVEV---DEQTTVAALLDS-LGF--PEKGIAVAVDWSVLP 42 (65)
T ss_pred CEEEECCEEEEc---CCCCcHHHHHHH-cCC--CCCcEEEEECCcCcC
Confidence 478999999876 367899999975 676 34566 777887654
No 41
>PRK08053 sulfur carrier protein ThiS; Provisional
Probab=70.66 E-value=7 Score=33.48 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=31.4
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
++++|||+.+++ +...||.++|.. +++. ..+| |-+|++-++
T Consensus 1 m~i~vNg~~~~~---~~~~tl~~ll~~-l~~~--~~~vaVavN~~iv~ 42 (66)
T PRK08053 1 MQILFNDQPMQC---AAGQTVHELLEQ-LNQL--QPGAALAINQQIIP 42 (66)
T ss_pred CEEEECCeEEEc---CCCCCHHHHHHH-cCCC--CCcEEEEECCEEeC
Confidence 478999999876 357899999964 5653 4678 788988775
No 42
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=69.90 E-value=4.2 Score=43.96 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=32.2
Q ss_pred EEEEeccCC-CCCchHHHHhcCC----CCcCCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVD-PSTTLLEFLRYHT----RFKSVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~-~~~~L~~~LR~~~----~l~g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ +++ +++|||++||+.. ...+.+.|| |.|||+++.+|
T Consensus 18 ~~~~v-~~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~vnG~~~laC 72 (232)
T PRK05950 18 QTYEV-DVDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNINGKNGLAC 72 (232)
T ss_pred EEEEe-CCCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEECCcCccch
Confidence 45666 688 9999999999753 356778887 89999997764
No 43
>PRK06944 sulfur carrier protein ThiS; Provisional
Probab=69.27 E-value=6.7 Score=33.23 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=30.2
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
++++|||+.+++ +++.||.++|.. +++. ... |.+||+.+.
T Consensus 1 m~i~vNg~~~~~---~~~~tl~~ll~~-l~~~---~~~~v~vN~~~v~ 41 (65)
T PRK06944 1 MDIQLNQQTLSL---PDGATVADALAA-YGAR---PPFAVAVNGDFVA 41 (65)
T ss_pred CEEEECCEEEEC---CCCCcHHHHHHh-hCCC---CCeEEEECCEEcC
Confidence 468999999876 467899999964 5663 456 788998764
No 44
>TIGR01683 thiS thiamine biosynthesis protein ThiS. This model represents ThiS, a small thiamine-biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis.
Probab=68.52 E-value=6.8 Score=33.30 Aligned_cols=39 Identities=31% Similarity=0.356 Sum_probs=29.9
Q ss_pred EEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 16 ~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
++|||+.++. +.++||.++|.. +++. ..++ |.+||+.+.
T Consensus 1 i~iNg~~~~~---~~~~tv~~ll~~-l~~~--~~~v~v~vN~~iv~ 40 (64)
T TIGR01683 1 ITVNGEPVEV---EDGLTLAALLES-LGLD--PRRVAVAVNGEIVP 40 (64)
T ss_pred CEECCeEEEc---CCCCcHHHHHHH-cCCC--CCeEEEEECCEEcC
Confidence 4799999876 357899999974 6765 3566 788998774
No 45
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=68.00 E-value=16 Score=44.70 Aligned_cols=73 Identities=21% Similarity=0.013 Sum_probs=46.3
Q ss_pred CCceEEEEEeeCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccch-hhhh
Q 002015 594 MSTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGST-KSEA 672 (981)
Q Consensus 594 ~~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr-~t~~ 672 (981)
-+..+....+.||.++|.+++... ..+...+|+.||+ |+++|+|+. |+-+|.+|++ ....
T Consensus 49 Ep~~~~A~~~~~g~l~v~~~tQ~p-----~~~r~~va~~lgl--------p~~~V~V~~------~~~GGgFG~~~~~~~ 109 (547)
T PF02738_consen 49 EPHGAVAWWDEDGRLTVWSSTQWP-----FHVRRAVAEALGL--------PPEKVRVIS------PYVGGGFGKKKQDSP 109 (547)
T ss_dssp S-SEEEEEEETTTEEEEEES-SSH-----HHHHHHHHHHHTS---------GGGEEEEE------SB-S--TTTTSSTHH
T ss_pred CCCeEEEEEccCCCEEEEECCcCH-----hHHHHHHhhhhcC--------ChhHEEEee------eecCCCCCCccccch
Confidence 356777777789999999986532 3456789999999 999999985 4556788843 3333
Q ss_pred HHHHHHHHHHHHH
Q 002015 673 SCQAVRNCCKILV 685 (981)
Q Consensus 673 ~g~Av~~Aa~~l~ 685 (981)
..-.+..+|+++.
T Consensus 110 ~~~~aa~~a~~~g 122 (547)
T PF02738_consen 110 IAVLAALAAKKTG 122 (547)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHhccC
Confidence 3444444444443
No 46
>cd00565 ThiS ThiaminS ubiquitin-like sulfur carrier protein. ThiS (ThiaminS) is a sulfur carrier protein involved in thiamin biosynthesis in bacteria. The ThiS fold, like those of two closely related proteins MoaD and Urm1, is similar to that of ubiquitin although there is little or no sequence similarity.
Probab=67.91 E-value=7.2 Score=33.22 Aligned_cols=41 Identities=34% Similarity=0.425 Sum_probs=30.4
Q ss_pred EEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-EeeecccccC
Q 002015 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTHR 61 (981)
Q Consensus 15 ~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~~ 61 (981)
.++|||+.+++ +..+|+.++|.. +++. +.+| |.+||+.+..
T Consensus 1 ~i~iNg~~~~~---~~~~tv~~ll~~-l~~~--~~~i~V~vNg~~v~~ 42 (65)
T cd00565 1 KITVNGEPREV---EEGATLAELLEE-LGLD--PRGVAVALNGEIVPR 42 (65)
T ss_pred CEEECCeEEEc---CCCCCHHHHHHH-cCCC--CCcEEEEECCEEcCH
Confidence 37899999876 357899999964 6653 4566 7889987753
No 47
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=67.80 E-value=8.8 Score=49.43 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=48.9
Q ss_pred CCeeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEec------cCCCCCCCCCcccchHHHHHHHH
Q 002015 328 TQTALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVITR------RVGGGFGGKAIKAMPVATACALA 396 (981)
Q Consensus 328 p~~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~~------~vGGgFG~K~~~~~~~~~~aAla 396 (981)
+..++...+ ||.++|+++++.. ..+.+.+|+.||+|.++|+|+.. +-+|.+|++... ..--++-.|
T Consensus 594 ~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~--~~G~Av~~A 670 (848)
T TIGR03311 594 TGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSL--FTGEATRRA 670 (848)
T ss_pred cceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHH--HHHHHHHHH
Confidence 445566665 7899999998654 34567788999999999999864 456778888642 223333345
Q ss_pred HHhCC
Q 002015 397 AYKLC 401 (981)
Q Consensus 397 A~~~g 401 (981)
|.+++
T Consensus 671 a~~l~ 675 (848)
T TIGR03311 671 AAKLK 675 (848)
T ss_pred HHHHH
Confidence 55553
No 48
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=66.62 E-value=8.8 Score=51.79 Aligned_cols=89 Identities=44% Similarity=0.820 Sum_probs=78.3
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------Eeee----------cccccCC-----------
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLVD----------AEKTHRP----------- 62 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~d----------g~~~~~~----------- 62 (981)
.|+|+|||+.++..+++|+++||+|||++++|||||+|| |+|| |+++++|
T Consensus 2 ~~~~~~Ng~~~~~~~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 81 (1330)
T TIGR02969 2 ELLFYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGAA 81 (1330)
T ss_pred cEEEEECCEEEEeccCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCCE
Confidence 589999999985447999999999999999999999999 9998 4676543
Q ss_pred ------------------------------CCCCCCC-----------CCCHHHHHHHhhCCcccCCCCHHHHHHHHHHh
Q 002015 63 ------------------------------EPPPGFS-----------KLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101 (981)
Q Consensus 63 ------------------------------~~~pG~~-----------~p~~~~i~~~l~gnlCRCtgY~~i~~A~~~~~ 101 (981)
.|||||+ +|+++||+++|+|||||||||++|++|+++++
T Consensus 82 v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~~~~p~~~~i~~~l~gnlCRCtgY~~i~~a~~~~~ 161 (1330)
T TIGR02969 82 VTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEPTLDQLTDALGGNLCRCTGYRPIIDACKTFC 161 (1330)
T ss_pred EEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHcCCCCCHHHHHHHhcCCcccCCCCHHHHHHHHHHh
Confidence 2789984 68999999999999999999999999998643
No 49
>PLN02906 xanthine dehydrogenase
Probab=65.57 E-value=13 Score=50.21 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=45.8
Q ss_pred CCCCeeEEEECCCCeEEEEeCCC----ChH-HHHHHHHHHhCCCCceEEEEe------ccCCCCCCCCCc
Q 002015 326 METQTALAVPDEDNCLVVYSSIQ----CPE-YAHATIARCLGIPEHNVRVIT------RRVGGGFGGKAI 384 (981)
Q Consensus 326 mEp~~avA~~~~dg~l~V~~stQ----~p~-~~r~~lA~~Lglp~~kVrV~~------~~vGGgFG~K~~ 384 (981)
+.+..+....+.||.++|+++++ ..+ .+.+.+|+.||+|.++|+|+. |+-+|.+|++..
T Consensus 1010 ~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t 1079 (1319)
T PLN02906 1010 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASS 1079 (1319)
T ss_pred CCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhh
Confidence 44566777787889999999774 433 456778899999999999985 445788998864
No 50
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=64.54 E-value=12 Score=47.80 Aligned_cols=71 Identities=11% Similarity=-0.022 Sum_probs=50.0
Q ss_pred CceEEEEEeeCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCcccCCCCCccchhhhhHH
Q 002015 595 STPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASC 674 (981)
Q Consensus 595 ~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~~p~~~gt~aSr~t~~~g 674 (981)
+..+....++||+++|+++++.. ..+...+|+.||+ |.++|+|+. |+-+|.+|++.....-
T Consensus 184 p~~~~A~~~~~g~l~v~~stQ~p-----~~~r~~lA~~Lgl--------p~~~VrV~~------~~vGGgFG~K~~~~~~ 244 (768)
T TIGR03196 184 PEAALAMPAADGGFDLRAATQHG-----HKDREQIAACFDI--------PEEKIRITL------AGMGGAFGGKDDLNIQ 244 (768)
T ss_pred CceEEEEEcCCCCEEEEECCCch-----HHHHHHHHHHhCC--------CHHHEEEEe------CCCCCccCCcccccHH
Confidence 46667777778999999986543 2345678899999 999999985 4557899999765443
Q ss_pred HHHHHHHHHH
Q 002015 675 QAVRNCCKIL 684 (981)
Q Consensus 675 ~Av~~Aa~~l 684 (981)
-.+..++.++
T Consensus 245 ~~aa~~A~~~ 254 (768)
T TIGR03196 245 IHAALLALAS 254 (768)
T ss_pred HHHHHHHHHh
Confidence 3333344443
No 51
>PRK05659 sulfur carrier protein ThiS; Validated
Probab=63.91 E-value=8.1 Score=32.88 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=29.5
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
++++|||+.+++ +.++||.++|.. +++.. .++ |.+||+-++
T Consensus 1 m~i~vNG~~~~~---~~~~tl~~lL~~-l~~~~--~~vav~vNg~iv~ 42 (66)
T PRK05659 1 MNIQLNGEPREL---PDGESVAALLAR-EGLAG--RRVAVEVNGEIVP 42 (66)
T ss_pred CEEEECCeEEEc---CCCCCHHHHHHh-cCCCC--CeEEEEECCeEeC
Confidence 468999999876 457899999964 66643 333 667886554
No 52
>PRK06437 hypothetical protein; Provisional
Probab=62.53 E-value=11 Score=32.50 Aligned_cols=42 Identities=14% Similarity=0.251 Sum_probs=30.2
Q ss_pred EEEECC-EEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 15 VFAVNG-EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 15 ~~~vNg-~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
-++||| ++.+. +++...|+.++|++ |++. ..++ |.+||+.+.
T Consensus 4 ~~~v~g~~~~~~-~i~~~~tv~dLL~~-Lgi~--~~~vaV~vNg~iv~ 47 (67)
T PRK06437 4 MIRVKGHINKTI-EIDHELTVNDIIKD-LGLD--EEEYVVIVNGSPVL 47 (67)
T ss_pred eEEecCCcceEE-EcCCCCcHHHHHHH-cCCC--CccEEEEECCEECC
Confidence 367899 22333 45678999999975 7885 4567 778998876
No 53
>PRK07696 sulfur carrier protein ThiS; Provisional
Probab=62.42 E-value=12 Score=32.18 Aligned_cols=42 Identities=21% Similarity=0.285 Sum_probs=30.7
Q ss_pred EEEEECCEEEEeccCCCC-CchHHHHhcCCCCcCCCcCc-EeeecccccC
Q 002015 14 VVFAVNGEKFEVSSVDPS-TTLLEFLRYHTRFKSVKLGC-VLVDAEKTHR 61 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~-~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~~ 61 (981)
++++|||+.+++ +.. .||.++|.. +++. ..++ |-+|++.++.
T Consensus 1 m~I~vNG~~~~~---~~~~~tv~~lL~~-l~~~--~~~vav~vN~~iv~r 44 (67)
T PRK07696 1 MNLKINGNQIEV---PESVKTVAELLTH-LELD--NKIVVVERNKDILQK 44 (67)
T ss_pred CEEEECCEEEEc---CCCcccHHHHHHH-cCCC--CCeEEEEECCEEeCH
Confidence 468999999876 234 689999974 6774 4466 7888887753
No 54
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=61.58 E-value=15 Score=47.06 Aligned_cols=52 Identities=19% Similarity=0.358 Sum_probs=39.3
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCC----------CcCc----EeeecccccCCC--CCCCCC
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSV----------KLGC----VLVDAEKTHRPE--PPPGFS 69 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~----------k~gC----vl~dg~~~~~~~--~~pG~~ 69 (981)
|+|+|||+++++ ++++|+|+.+|.. |+.-. ..+| |.|||+++.+|. ..+||.
T Consensus 2 v~i~IdG~~v~~---~~G~til~aa~~~-gi~iP~lC~~~~~~~~G~Cr~C~VeV~G~~~~AC~t~v~dGM~ 69 (819)
T PRK08493 2 ITITINGKECEA---QEGEYILNVARRN-GIFIPAICYLSGCSPTLACRLCMVEADGKRVYSCNTKAKEGMN 69 (819)
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHc-CCccccccccCCCCCCccccceEEEECCEEeccccCCCCCCCE
Confidence 789999999876 5899999999974 54332 1234 889999987764 368994
No 55
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=60.60 E-value=17 Score=45.59 Aligned_cols=53 Identities=17% Similarity=0.298 Sum_probs=38.1
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCC----------cCc----Eeeeccc--ccCCC--CCCCCC
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----------LGC----VLVDAEK--THRPE--PPPGFS 69 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k----------~gC----vl~dg~~--~~~~~--~~pG~~ 69 (981)
.|+|+|||+++++ .+++||+++|++. |+.-.+ -.| |.+||++ +.+|. ..+||.
T Consensus 3 ~v~~~idg~~~~~---~~g~ti~~a~~~~-g~~ip~~c~~~~~~~~g~C~~C~V~v~g~~~~~~aC~t~~~~Gm~ 73 (652)
T PRK12814 3 TISLTINGRSVTA---APGTSILEAAASA-GITIPTLCFHQELEATGSCWMCIVEIKGKNRFVPACSTAVSEGMV 73 (652)
T ss_pred eEEEEECCEEEEe---CCcCcHHHHHHHc-CCccccccCCCCCCCccccceeEEEECCCcceecCcCCCCCCCCE
Confidence 5899999998875 5899999999874 433111 233 8889965 55654 468994
No 56
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=58.41 E-value=29 Score=30.95 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=40.7
Q ss_pred eEEEEEeeCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCCc
Q 002015 597 PGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLS 657 (981)
Q Consensus 597 ~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~~ 657 (981)
.....++.||.+.|...+.+..-=.+..+....|+.||+ |..+|+++.|-|..
T Consensus 17 ~~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v--------~ks~i~i~~G~~Sr 69 (77)
T PF02594_consen 17 NAIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGV--------PKSDIEIVSGHTSR 69 (77)
T ss_dssp -EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT----------TTCEEECC-CCCS
T ss_pred cccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCC--------CcccEEEEecCCCC
Confidence 344466777999999999988888899999999999999 99999999998753
No 57
>PRK06488 sulfur carrier protein ThiS; Validated
Probab=56.38 E-value=16 Score=31.04 Aligned_cols=40 Identities=28% Similarity=0.319 Sum_probs=29.2
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-Eeeeccccc
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTH 60 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~ 60 (981)
|+++|||+.+++ +..+|.++|+. +++.. .++ |-+|++-++
T Consensus 1 m~i~~Ng~~~~~----~~~tl~~Ll~~-l~~~~--~~vavavN~~iv~ 41 (65)
T PRK06488 1 MKLFVNGETLQT----EATTLALLLAE-LDYEG--NWLATAVNGELVH 41 (65)
T ss_pred CEEEECCeEEEc----CcCcHHHHHHH-cCCCC--CeEEEEECCEEcC
Confidence 468999999886 23689999964 66643 455 788888765
No 58
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=55.35 E-value=12 Score=41.70 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=30.9
Q ss_pred EEEEeccCCCCCchHHHHhc---CCCC-cCCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVDPSTTLLEFLRY---HTRF-KSVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR~---~~~l-~g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ ++++++|||++|+. +... .+.+.+| |.|||+++.+|
T Consensus 25 ~~~~v-~~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~ING~~~laC 78 (279)
T PRK12576 25 QEYKV-KVDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKINGEPRLAC 78 (279)
T ss_pred EEEEE-ecCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEECCcEeccc
Confidence 55677 68999999999997 2222 2557776 89999998765
No 59
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional
Probab=55.35 E-value=9.4 Score=41.68 Aligned_cols=41 Identities=24% Similarity=0.391 Sum_probs=30.8
Q ss_pred EEEEeccCCCCCchHHHH---hcCCCCc-CCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVDPSTTLLEFL---RYHTRFK-SVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~~~~~L~~~L---R~~~~l~-g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ ++++++|||+.| ++++..+ +.+.|| |.|||+++.+|
T Consensus 25 ~~~~v-~~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~InG~~~laC 78 (244)
T PRK12385 25 QTYEV-PYDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLAC 78 (244)
T ss_pred EEEEe-eCCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceECccChhhH
Confidence 55666 688999999999 5555443 566776 89999998765
No 60
>TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein. Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase.
Probab=53.44 E-value=9.8 Score=40.77 Aligned_cols=41 Identities=22% Similarity=0.364 Sum_probs=31.3
Q ss_pred EEEEeccCCCCCchHHHHhcCC----CCcCCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVDPSTTLLEFLRYHT----RFKSVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR~~~----~l~g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ ++++++|||+.|++-. ...+.+.+| |.|||+++.+|
T Consensus 15 ~~~~v-~~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~vnG~~~laC 68 (220)
T TIGR00384 15 QSYEV-PADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNVNGKPVLAC 68 (220)
T ss_pred EEEEE-eCCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEECCEEhhhh
Confidence 55667 5889999999998621 445677776 89999988765
No 61
>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional
Probab=48.34 E-value=42 Score=37.50 Aligned_cols=55 Identities=29% Similarity=0.421 Sum_probs=38.5
Q ss_pred eEEEEEECCEEEEeccCCCCCchHHHHhcCCCCc----------CCCcCc----Eeeeccc--ccCCC--CCCCCC
Q 002015 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK----------SVKLGC----VLVDAEK--THRPE--PPPGFS 69 (981)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~----------g~k~gC----vl~dg~~--~~~~~--~~pG~~ 69 (981)
..+.++|||+++++ +++++|||+..|+. |+. ...-+| |-|+|+. +.+|. ..+||.
T Consensus 67 ~~~~I~IDGk~VeV--~~~G~TILeAAr~~-GI~IPtLCy~~~L~p~G~CRlClVEVeG~~~lv~AC~tpV~eGM~ 139 (297)
T PTZ00305 67 PRAIMFVNKRPVEI--IPQEENLLEVLERE-GIRVPKFCYHPILSVAGNCRMCLVQVDGTQNLVVSCATVALPGMS 139 (297)
T ss_pred CceEEEECCEEEEe--cCCCChHHHHHHHc-CCCcCccccCCCCCCCCccceeEEEECCCcCcccccCCcCCCCCE
Confidence 36789999999976 36899999999874 332 224456 6778864 44543 368995
No 62
>PLN00192 aldehyde oxidase
Probab=47.00 E-value=29 Score=47.12 Aligned_cols=100 Identities=71% Similarity=1.096 Sum_probs=85.7
Q ss_pred CeeEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc---------Eee----------ecccccCC--------
Q 002015 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC---------VLV----------DAEKTHRP-------- 62 (981)
Q Consensus 10 ~~~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC---------vl~----------dg~~~~~~-------- 62 (981)
+.+.|+|+|||+.+++.+++|+++||+|||++++|||||+|| |+| ||+++++|
T Consensus 2 ~~~~i~~~vNg~~~~~~~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~ 81 (1344)
T PLN00192 2 SNMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVN 81 (1344)
T ss_pred CcceEEEEECCEEEEeccCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhC
Confidence 455799999999999866999999999999999999999999 888 67777643
Q ss_pred ---------------------------------CCCCCCC----------------C-------CCHHHHHHHhhCCccc
Q 002015 63 ---------------------------------EPPPGFS----------------K-------LTISEAEKAIAGNLCR 86 (981)
Q Consensus 63 ---------------------------------~~~pG~~----------------~-------p~~~~i~~~l~gnlCR 86 (981)
.|||||+ + |+++||+++|+|||||
T Consensus 82 g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCR 161 (1344)
T PLN00192 82 GCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCR 161 (1344)
T ss_pred CCEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCcee
Confidence 2789983 1 2799999999999999
Q ss_pred CCCCHHHHHHHHHHhhccccccc
Q 002015 87 CTGYRPIADACKSFAADVDIEDL 109 (981)
Q Consensus 87 CtgY~~i~~A~~~~~~~~~~~~~ 109 (981)
||||++|++|+++++...+.+++
T Consensus 162 CtgY~~i~~a~~~~~~~~~~~~~ 184 (1344)
T PLN00192 162 CTGYRPIVDACKSFAADVDIEDL 184 (1344)
T ss_pred CCCCHHHHHHHHHHHhhccchhc
Confidence 99999999999999877555444
No 63
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=43.24 E-value=52 Score=35.58 Aligned_cols=53 Identities=15% Similarity=0.142 Sum_probs=36.3
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcC----------CCcCc----Eeeeccc--ccCCC--CCCCCC
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS----------VKLGC----VLVDAEK--THRPE--PPPGFS 69 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g----------~k~gC----vl~dg~~--~~~~~--~~pG~~ 69 (981)
.|+|+|||+.+++ ++++|||+.++.. |+.- ...+| |.|||+. +.+|. ...||.
T Consensus 3 ~v~i~idg~~~~~---~~g~til~a~~~~-gi~ip~~C~~~~~~~~G~C~~C~V~v~g~~~~~~aC~t~v~~Gm~ 73 (234)
T PRK07569 3 VKTLTIDDQLVSA---REGETLLEAAREA-GIPIPTLCHLDGLSDVGACRLCLVEIEGSNKLLPACVTPVAEGMV 73 (234)
T ss_pred eEEEEECCEEEEe---CCCCHHHHHHHHc-CCCCCcCcCCCCCCCCCccCCcEEEECCCCccccCcCCCCCCCCE
Confidence 5899999999654 6899999999864 3221 13345 8889974 33443 357884
No 64
>PRK09129 NADH dehydrogenase subunit G; Validated
Probab=41.44 E-value=47 Score=42.51 Aligned_cols=52 Identities=19% Similarity=0.274 Sum_probs=37.2
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcC----------CCcCc----Eeeeccc--ccCCC--CCCCCC
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS----------VKLGC----VLVDAEK--THRPE--PPPGFS 69 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g----------~k~gC----vl~dg~~--~~~~~--~~pG~~ 69 (981)
|+|+|||+++++ +++++|++.++.. |..- ....| |-+||.+ +.+|. ..+||.
T Consensus 2 ~~~~idg~~~~~---~~g~~il~a~~~~-g~~ip~~c~~~~~~~~~~C~~C~v~v~~~~~~~~aC~~~~~~gm~ 71 (776)
T PRK09129 2 VEIEIDGKKVEV---PEGSMVIEAADKA-GIYIPRFCYHKKLSIAANCRMCLVEVEKAPKPLPACATPVTDGMK 71 (776)
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHc-CCCCCcccCCCCCCCCCCcceeEEEECCCCCcCcccCCCCCCCCE
Confidence 789999999876 6899999999864 3211 12346 8888865 55654 368984
No 65
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=34.24 E-value=90 Score=27.82 Aligned_cols=43 Identities=16% Similarity=0.337 Sum_probs=29.3
Q ss_pred eeEEEECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEe
Q 002015 330 TALAVPDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVIT 372 (981)
Q Consensus 330 ~avA~~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~ 372 (981)
..+.-+.++|.|.|....+-- ..+.+.||+.|++|.++|+++.
T Consensus 17 ~~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v~ks~i~i~~ 64 (77)
T PF02594_consen 17 NAIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGVPKSDIEIVS 64 (77)
T ss_dssp -EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT--TTCEEECC
T ss_pred cccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCCCcccEEEEe
Confidence 345445444688888877643 5788899999999999999974
No 66
>CHL00134 petF ferredoxin; Validated
Probab=33.12 E-value=67 Score=29.89 Aligned_cols=36 Identities=11% Similarity=0.260 Sum_probs=26.6
Q ss_pred EEEEEE--CCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc
Q 002015 13 SVVFAV--NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 13 ~i~~~v--Ng~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC 51 (981)
+|.+.. +|..+.+ +++++++||+.|++. |+ .+..+|
T Consensus 5 ~v~~~~~~~~~~~~~-~~~~~~tLL~a~~~~-Gi-~i~~~C 42 (99)
T CHL00134 5 KVTLLSEEEGIDVTI-DCPDDVYILDAAEEQ-GI-DLPYSC 42 (99)
T ss_pred EEEEEecCCCCeEEE-EECCCCcHHHHHHHc-CC-CCCcCC
Confidence 444444 7777777 688999999999875 65 666677
No 67
>PRK00647 hypothetical protein; Validated
Probab=32.36 E-value=90 Score=29.11 Aligned_cols=44 Identities=23% Similarity=0.106 Sum_probs=39.7
Q ss_pred CCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCC
Q 002015 605 DGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTL 656 (981)
Q Consensus 605 DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~ 656 (981)
+|.+.|...+.+..--.+-.+.+..|+.||+ |-.+|+++.|.|.
T Consensus 26 ~~~Lkvrv~ApPvdGKAN~ali~~LAk~l~v--------pks~I~Iv~G~tS 69 (96)
T PRK00647 26 GGILKVRVTEVPEKGKANDAVIALLAKFLSL--------PKRDVTLIAGETS 69 (96)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCC--------ChhhEEEEecCCC
Confidence 5788888888888888899999999999999 9999999999885
No 68
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=32.23 E-value=54 Score=37.20 Aligned_cols=42 Identities=21% Similarity=0.183 Sum_probs=32.4
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc-EeeecccccC
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-VLVDAEKTHR 61 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC-vl~dg~~~~~ 61 (981)
++++|||+.+++ +.+.+|.++|.+ +++. ..++ |.+||+.++.
T Consensus 1 M~I~VNGk~~el---~e~~TL~dLL~~-L~i~--~~~VAVeVNgeIVpr 43 (326)
T PRK11840 1 MRIRLNGEPRQV---PAGLTIAALLAE-LGLA--PKKVAVERNLEIVPR 43 (326)
T ss_pred CEEEECCEEEec---CCCCcHHHHHHH-cCCC--CCeEEEEECCEECCH
Confidence 468999999876 467899999974 6774 4567 7789998764
No 69
>PRK10713 2Fe-2S ferredoxin YfaE; Provisional
Probab=31.96 E-value=96 Score=27.85 Aligned_cols=35 Identities=26% Similarity=0.480 Sum_probs=25.6
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC 51 (981)
+|+|.-+|+.+++ .+++++||+.|++. |+ .+..+|
T Consensus 3 ~v~~~~~~~~~~~--~~~~~tlL~a~~~~-gi-~~p~~C 37 (84)
T PRK10713 3 RVTLRITGTQLLC--QDEHPSLLAALESH-NV-AVEYQC 37 (84)
T ss_pred EEEEEeCCcEEEe--cCCCCcHHHHHHHc-CC-CCCCCC
Confidence 4677778877655 23459999999875 76 777888
No 70
>TIGR02008 fdx_plant ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.
Probab=31.71 E-value=84 Score=29.02 Aligned_cols=36 Identities=11% Similarity=0.239 Sum_probs=25.0
Q ss_pred EEEE-EECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc
Q 002015 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 13 ~i~~-~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC 51 (981)
+|+| +=+|...++ .++++++||+.|++. |+ .+..+|
T Consensus 4 ~v~~~~~~~~~~~~-~~~~g~tLLda~~~~-Gi-~i~~~C 40 (97)
T TIGR02008 4 KVTLVNPDGGEETI-ECPDDQYILDAAEEA-GI-DLPYSC 40 (97)
T ss_pred EEEEEECCCCEEEE-EECCCCcHHHHHHHc-CC-CCCcCC
Confidence 3444 237756666 578999999999875 65 456666
No 71
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes.
Probab=30.54 E-value=54 Score=40.69 Aligned_cols=50 Identities=20% Similarity=0.223 Sum_probs=34.9
Q ss_pred EEECCEEEEeccCCCCCchHHHHhcCCCCcCC----------CcCc----Eeeecc---cccCCC--CCCCCC
Q 002015 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSV----------KLGC----VLVDAE---KTHRPE--PPPGFS 69 (981)
Q Consensus 16 ~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~----------k~gC----vl~dg~---~~~~~~--~~pG~~ 69 (981)
++|||+++++ +++++|++.+++. |..-. .-.| |-++|. .+.+|. .+.||.
T Consensus 1 ~~idg~~~~~---~~g~~il~a~~~~-gi~ip~~C~~~~l~~~g~Cr~C~v~v~g~~~~~~~aC~~~~~~gm~ 69 (603)
T TIGR01973 1 IFIDGKELEV---PKGTTVLQACLSA-GIEIPRFCYHEKLSIAGNCRMCLVEVEKFPDKPVASCATPVTDGMK 69 (603)
T ss_pred CEECCEEEEe---CCCCHHHHHHHHc-CCCccccCCCCCCCCCCccccCEEEECCCCCCcccccCCCCCCCCE
Confidence 5899999876 6899999999874 43222 2234 888886 456654 368995
No 72
>PRK09130 NADH dehydrogenase subunit G; Validated
Probab=27.74 E-value=86 Score=39.63 Aligned_cols=52 Identities=23% Similarity=0.245 Sum_probs=36.3
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcC----------CCcCc----Eeeecc---cccCCC--CCCCCC
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS----------VKLGC----VLVDAE---KTHRPE--PPPGFS 69 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g----------~k~gC----vl~dg~---~~~~~~--~~pG~~ 69 (981)
|+++|||+++++ ++++|||+..|.. |..- ..-.| |-++|. ++.+|. ..+||.
T Consensus 2 ~~~~Idg~~v~v---~~g~til~a~~~~-gi~IP~lCy~~~l~~~g~Cr~ClVev~~~~~~~~~sC~~~v~~gm~ 72 (687)
T PRK09130 2 VKLKVDGKEIEV---PDGYTLLQACEAA-GAEIPRFCYHERLSIAGNCRMCLVEVKGGPPKPVASCAMPVGEGMV 72 (687)
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHc-CCCcCcccCCCCCCCCCCCCCCEEEECCCCCCcccccCCCCCCCCE
Confidence 789999999875 6999999999864 4432 23345 777775 455553 258884
No 73
>PRK05090 hypothetical protein; Validated
Probab=27.53 E-value=1.2e+02 Score=28.16 Aligned_cols=45 Identities=7% Similarity=-0.009 Sum_probs=39.7
Q ss_pred eCCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCC
Q 002015 604 SDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTL 656 (981)
Q Consensus 604 ~DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~ 656 (981)
.+|.+.|...+...--=.+..+....|+.||+ |..+|+++.|.|+
T Consensus 30 ~~~~lkv~v~ApPveGkAN~ali~~LAk~l~v--------~ks~I~i~~G~ts 74 (95)
T PRK05090 30 HGDELKVAITAPPVDGQANAHLLKFLAKQFRV--------AKSQVVIEKGELG 74 (95)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCC--------ChhhEEEEecCCC
Confidence 46788888888888777889999999999999 9999999999885
No 74
>PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=27.24 E-value=87 Score=34.34 Aligned_cols=41 Identities=15% Similarity=0.368 Sum_probs=29.2
Q ss_pred EEEEeccCCCCCchHHHHh---cC-CCC-------cCCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVDPSTTLLEFLR---YH-TRF-------KSVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR---~~-~~l-------~g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ ++++++|+||.|. ++ +.+ -.-+.+| |.|||+|..+|
T Consensus 23 q~y~v-~~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~ING~p~LAC 83 (249)
T PRK08640 23 EEFEI-PYRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVINGKPRQAC 83 (249)
T ss_pred EEEEe-cCCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEECCccchhh
Confidence 55777 6889999999886 32 112 2345577 89999998765
No 75
>PF14453 ThiS-like: ThiS-like ubiquitin
Probab=25.21 E-value=1.1e+02 Score=25.70 Aligned_cols=39 Identities=28% Similarity=0.304 Sum_probs=26.5
Q ss_pred EEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc--EeeecccccC
Q 002015 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC--VLVDAEKTHR 61 (981)
Q Consensus 14 i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC--vl~dg~~~~~ 61 (981)
+.++|||+.+++ +.+.|| ..||++ .|..+ +++||-++..
T Consensus 1 M~I~vN~k~~~~---~~~~tl-~~lr~~-----~k~~~DI~I~NGF~~~~ 41 (57)
T PF14453_consen 1 MKIKVNEKEIET---EENTTL-FELRKE-----SKPDADIVILNGFPTKE 41 (57)
T ss_pred CEEEECCEEEEc---CCCcCH-HHHHHh-----hCCCCCEEEEcCcccCC
Confidence 367899999876 355554 566765 34566 7789887653
No 76
>PRK01530 hypothetical protein; Reviewed
Probab=24.98 E-value=1.4e+02 Score=28.43 Aligned_cols=44 Identities=9% Similarity=-0.013 Sum_probs=38.3
Q ss_pred CCcEEEEecccccCCchhhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCC
Q 002015 605 DGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTL 656 (981)
Q Consensus 605 DG~v~v~~g~~d~GQG~~T~~aqiaAe~Lgi~~~~~~~~~~e~V~v~~~DT~ 656 (981)
+|.+.|...+.+.--=.+..+....|..||+ |..+|+++.|.|.
T Consensus 38 ~~~Lki~v~ApPvdGkAN~ali~~LAk~l~v--------~ks~I~IvsG~tS 81 (105)
T PRK01530 38 IPYLKLSIKAIPEQGKANEEIINYLAKEWKL--------SRSNIEIIKGHTH 81 (105)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCC--------ChhhEEEEecCCC
Confidence 4578888888777767888999999999999 9999999999885
No 77
>PRK01530 hypothetical protein; Reviewed
Probab=24.96 E-value=1.2e+02 Score=28.68 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=29.4
Q ss_pred ECCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCceEEEEe
Q 002015 335 PDEDNCLVVYSSIQCP-----EYAHATIARCLGIPEHNVRVIT 372 (981)
Q Consensus 335 ~~~dg~l~V~~stQ~p-----~~~r~~lA~~Lglp~~kVrV~~ 372 (981)
|++++.|.|....+-. ..+.+.||+.||+|.++|+++.
T Consensus 35 ~~~~~~Lki~v~ApPvdGkAN~ali~~LAk~l~v~ks~I~Ivs 77 (105)
T PRK01530 35 INNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIK 77 (105)
T ss_pred cCCCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEe
Confidence 3444578888777643 5677889999999999999985
No 78
>PRK11872 antC anthranilate dioxygenase reductase; Provisional
Probab=23.71 E-value=84 Score=35.95 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=27.5
Q ss_pred EEEEE---CCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc
Q 002015 14 VVFAV---NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 14 i~~~v---Ng~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC 51 (981)
.+++| ||+.+.+ +++++++||+.|++. |+ .+..+|
T Consensus 3 ~~v~~~~~~~~~~~~-~~~~g~tlL~a~~~~-g~-~~p~~C 40 (340)
T PRK11872 3 HKVALSFADGKTLFF-PVGKDELLLDAALRN-GI-NLPLDC 40 (340)
T ss_pred eEEEEEecCCcEEEE-EeCCCCcHHHHHHHc-CC-CCcCCC
Confidence 34566 9999888 689999999999875 65 666677
No 79
>PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B ....
Probab=23.60 E-value=64 Score=30.82 Aligned_cols=41 Identities=20% Similarity=0.398 Sum_probs=26.0
Q ss_pred EEEEeccCCCCCchHHHHh---cCC-CCcCCCcCc---------EeeecccccCC
Q 002015 21 EKFEVSSVDPSTTLLEFLR---YHT-RFKSVKLGC---------VLVDAEKTHRP 62 (981)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR---~~~-~l~g~k~gC---------vl~dg~~~~~~ 62 (981)
+.+++ ++++++|+|+.|. +++ +--.-+.+| |.|||++..+|
T Consensus 19 ~~y~v-~~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~ING~~~LAC 72 (110)
T PF13085_consen 19 QEYEV-PVEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRINGRPRLAC 72 (110)
T ss_dssp EEEEE-EGGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEETTEEEEGG
T ss_pred EEEEe-cCCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEECCceecce
Confidence 35666 5789999988775 332 122445666 99999998765
No 80
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=21.98 E-value=75 Score=26.71 Aligned_cols=31 Identities=32% Similarity=0.527 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCceEEEEeccCCC---CCCCC
Q 002015 352 YAHATIARCLGIPEHNVRVITRRVGG---GFGGK 382 (981)
Q Consensus 352 ~~r~~lA~~Lglp~~kVrV~~~~vGG---gFG~K 382 (981)
.+.+.+++.||+|++.|.|.-..+.- ||||+
T Consensus 23 ~it~~l~~~lg~p~~~v~V~i~e~~~~~w~~gg~ 56 (64)
T PRK01964 23 EVTEAISATLDVPKERVRVIVNEVPSSHWGVAGV 56 (64)
T ss_pred HHHHHHHHHhCcChhhEEEEEEEcChHHeeECCE
No 81
>PF08529 NusA_N: NusA N-terminal domain; InterPro: IPR013735 This entry represents the N-terminal RNA polymerase-binding domain of bacterial transcription factors such as NusA (N-utilising substance A). NusA is involved in transcriptional pausing, termination and anti-termination. NusA from Thermotoga maritima contains an N-terminal domain and three RNA-binding domains (one S1 domain and two KH domains). The N-terminal domain consists of a bifurcated coiled beta-sheet within an alpha/beta(3)/alpha/beta/alpha fold, which can be divided into two subdomains: a globular head and a helical body. The globular head subdomain may interact with RNA polymerase, while the helical body displays a similar structure to that of the helical domain in sigma70 [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0031554 regulation of transcription termination, DNA-dependent; PDB: 1K0R_B 1HH2_P 1L2F_A 2KWP_A.
Probab=21.93 E-value=1.2e+02 Score=29.38 Aligned_cols=23 Identities=26% Similarity=0.309 Sum_probs=19.7
Q ss_pred eEEEEEccCCcEEEEEEEEEecc
Q 002015 799 SQVEINLLTGETTIVQSDIIYDC 821 (981)
Q Consensus 799 aeVEVD~~TG~v~V~r~~~v~D~ 821 (981)
++|++|.+||+++|-+..-+.|=
T Consensus 42 ~~v~id~~~g~i~v~~~~~VV~d 64 (122)
T PF08529_consen 42 IRVEIDEDTGEIKVYRKKEVVED 64 (122)
T ss_dssp EEEEEETTTTEEEEEEEEEEETT
T ss_pred EEEEEECCCCeEEEEEEeeecCC
Confidence 56999999999999988877654
No 82
>PF06971 Put_DNA-bind_N: Putative DNA-binding protein N-terminus; InterPro: IPR009718 This entry represents the C terminus (approximately 30 residues) of a number of Rex proteins. These are redox-sensing repressors that appear to be widespread among Gram-positive bacteria []. They modulate transcription in response to changes in cellular NADH/NAD(+) redox state. Rex is predicted to include a pyridine nucleotide-binding domain (Rossmann fold), and residues that might play key structural and nucleotide binding roles are highly conserved.; GO: 0045892 negative regulation of transcription, DNA-dependent, 0051775 response to redox state, 0005737 cytoplasm; PDB: 3IL2_B 3IKT_A 3IKV_B 1XCB_F 2DT5_A 2VT3_A 2VT2_A 3KEO_B 3KET_A 3KEQ_A ....
Probab=21.66 E-value=71 Score=26.06 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=14.1
Q ss_pred HHHHHHcCCCHHHHHHh
Q 002015 508 EHVASTLSMEVDFVRSI 524 (981)
Q Consensus 508 D~lA~~lG~DP~e~R~k 524 (981)
.+||+.+|++|..+|+-
T Consensus 32 ~~La~~~gi~~~qVRKD 48 (50)
T PF06971_consen 32 QELAEALGITPAQVRKD 48 (50)
T ss_dssp HHHHHHHTS-HHHHHHH
T ss_pred HHHHHHHCCCHHHhccc
Confidence 48999999999999973
No 83
>COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only]
Probab=21.23 E-value=1.7e+02 Score=36.91 Aligned_cols=55 Identities=18% Similarity=0.317 Sum_probs=40.3
Q ss_pred eeEEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCC----------cCc----EeeecccccCCCC--CCCCC
Q 002015 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----------LGC----VLVDAEKTHRPEP--PPGFS 69 (981)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k----------~gC----vl~dg~~~~~~~~--~pG~~ 69 (981)
.+.|+++|||+.+++ .+++++|++|.+. |+.-.| .+| |-+||+.+++|.- .-||.
T Consensus 3 ~~~i~vtidg~~~~v---~~G~tiL~a~~~~-gI~iP~iCy~~~l~pi~sCd~ClVEidG~l~rsCsT~v~dGm~ 73 (978)
T COG3383 3 EKMITVTIDGRSIEV---EEGTTILRAANRN-GIEIPHICYHESLGPIGSCDTCLVEIDGKLVRSCSTPVEDGMV 73 (978)
T ss_pred ceeEEEEECCeEEec---CCChHHHHHHHhc-CCcccceeccCCCCcccccceEEEEecCceeccccccccCCcE
Confidence 356899999999865 6899999999764 553333 345 8889998888752 46774
No 84
>PLN03136 Ferredoxin; Provisional
Probab=20.71 E-value=1.2e+02 Score=30.53 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=25.7
Q ss_pred EEEEEECCEEEEeccCCCCCchHHHHhcCCCCcCCCcCc
Q 002015 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC 51 (981)
Q Consensus 13 ~i~~~vNg~~~~~~~~~~~~~L~~~LR~~~~l~g~k~gC 51 (981)
+|.|.-++...++ +++++++|||.+++. |+ .+..+|
T Consensus 56 ~V~l~~~~~~~~~-~~~~g~tILdAa~~~-Gi-~lp~sC 91 (148)
T PLN03136 56 KVKFITPEGEQEV-ECEEDVYVLDAAEEA-GI-DLPYSC 91 (148)
T ss_pred EEEEecCCCcEEE-EeCCCCcHHHHHHHc-CC-CCCcCC
Confidence 4555435545666 588999999999875 65 567777
Done!