Query 002016
Match_columns 981
No_of_seqs 321 out of 1114
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 08:48:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002016.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002016hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q7m_A Lipoprotein YFGL, BAMB; 99.8 8.7E-16 3E-20 172.9 33.9 217 26-258 25-261 (376)
2 3q7m_A Lipoprotein YFGL, BAMB; 99.7 1.7E-15 5.8E-20 170.6 24.1 216 23-258 67-299 (376)
3 1flg_A Protein (quinoprotein e 99.6 1.9E-13 6.6E-18 164.5 27.2 230 27-265 42-364 (582)
4 2ad6_A Methanol dehydrogenase 99.6 3E-13 1E-17 162.5 26.0 226 29-265 40-344 (571)
5 1w6s_A Methanol dehydrogenase 99.5 1.6E-13 5.5E-18 165.5 22.7 221 28-258 39-345 (599)
6 1kb0_A Quinohemoprotein alcoho 99.5 2.7E-13 9.3E-18 166.1 24.7 221 28-258 54-349 (677)
7 1yiq_A Quinohemoprotein alcoho 99.5 2.7E-13 9.4E-18 166.4 23.7 221 28-258 47-341 (689)
8 1kv9_A Type II quinohemoprotei 99.5 4.1E-13 1.4E-17 164.3 22.6 220 28-258 43-336 (668)
9 2hz6_A Endoplasmic reticulum t 99.5 6.4E-14 2.2E-18 159.0 9.9 187 48-258 4-195 (369)
10 1flg_A Protein (quinoprotein e 99.4 2.8E-11 9.5E-16 145.7 29.1 193 24-221 83-365 (582)
11 1kb0_A Quinohemoprotein alcoho 99.4 2.3E-11 7.8E-16 149.1 28.5 190 25-219 93-354 (677)
12 1kv9_A Type II quinohemoprotei 99.4 4.3E-11 1.5E-15 146.4 29.3 188 25-217 82-339 (668)
13 2ad6_A Methanol dehydrogenase 99.4 1.2E-11 4.2E-16 148.5 23.6 189 27-220 82-344 (571)
14 1w6s_A Methanol dehydrogenase 99.4 1E-11 3.5E-16 149.8 22.6 190 27-220 82-351 (599)
15 3no2_A Uncharacterized protein 99.4 1.8E-11 6.2E-16 133.3 21.2 183 21-219 17-203 (276)
16 2be1_A Serine/threonine-protei 99.3 6.7E-12 2.3E-16 140.6 15.4 162 53-222 10-193 (339)
17 3no2_A Uncharacterized protein 99.3 1.2E-10 4.1E-15 126.8 24.5 193 53-264 5-203 (276)
18 1yiq_A Quinohemoprotein alcoho 99.3 4.3E-11 1.5E-15 146.9 22.7 191 25-220 86-347 (689)
19 2hz6_A Endoplasmic reticulum t 99.3 5.8E-13 2E-17 151.0 4.8 172 24-222 24-203 (369)
20 3vgz_A Uncharacterized protein 99.1 2.8E-07 9.5E-12 100.8 35.0 217 31-265 33-271 (353)
21 2be1_A Serine/threonine-protei 99.0 9.3E-10 3.2E-14 123.2 10.9 191 26-223 27-244 (339)
22 3hxj_A Pyrrolo-quinoline quino 99.0 1.1E-08 3.6E-13 111.6 18.2 180 52-257 106-285 (330)
23 3hxj_A Pyrrolo-quinoline quino 98.9 6.9E-08 2.4E-12 105.1 21.7 169 24-220 122-292 (330)
24 3vgz_A Uncharacterized protein 98.8 2.4E-06 8.2E-11 93.3 31.0 192 52-257 99-305 (353)
25 3dsm_A Uncharacterized protein 98.6 8E-06 2.8E-10 90.3 25.7 172 22-215 67-257 (328)
26 1l0q_A Surface layer protein; 98.4 0.00016 5.4E-09 80.3 31.3 215 21-257 14-235 (391)
27 3dsm_A Uncharacterized protein 98.4 1.6E-05 5.4E-10 87.9 22.9 188 52-257 52-255 (328)
28 1l0q_A Surface layer protein; 98.4 0.00045 1.5E-08 76.6 34.7 183 56-257 5-191 (391)
29 1nir_A Nitrite reductase; hemo 98.4 0.00049 1.7E-08 81.8 36.3 196 53-258 148-358 (543)
30 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.0022 7.4E-08 72.9 37.0 182 52-257 128-310 (445)
31 2iwa_A Glutamine cyclotransfer 98.2 0.00031 1.1E-08 75.9 25.5 188 53-256 31-238 (266)
32 3bws_A Protein LP49; two-domai 98.2 0.0018 6E-08 72.8 32.7 180 64-257 102-294 (433)
33 1pby_B Quinohemoprotein amine 98.2 0.0031 1.1E-07 67.6 32.7 151 54-219 2-171 (337)
34 3bws_A Protein LP49; two-domai 98.2 0.0037 1.3E-07 70.2 34.7 192 53-257 133-336 (433)
35 1pby_B Quinohemoprotein amine 98.1 0.00097 3.3E-08 71.6 27.5 139 22-172 14-172 (337)
36 1nir_A Nitrite reductase; hemo 98.0 0.0076 2.6E-07 71.5 33.7 195 51-255 188-402 (543)
37 2ovr_B FBW7, F-BOX/WD repeat p 97.9 0.0069 2.4E-07 68.7 31.6 183 52-257 208-393 (445)
38 3nok_A Glutaminyl cyclase; bet 97.9 0.00035 1.2E-08 75.2 19.2 153 52-221 63-220 (268)
39 1qks_A Cytochrome CD1 nitrite 97.9 0.0082 2.8E-07 71.7 32.8 196 53-258 166-376 (567)
40 3ow8_A WD repeat-containing pr 97.9 0.026 8.9E-07 61.5 34.4 189 53-257 48-239 (321)
41 3v7d_B Cell division control p 97.9 0.025 8.5E-07 64.2 35.3 190 52-257 131-343 (464)
42 3mbr_X Glutamine cyclotransfer 97.9 0.0035 1.2E-07 66.7 25.4 156 52-221 29-189 (243)
43 1gxr_A ESG1, transducin-like e 97.9 0.0084 2.9E-07 64.0 28.8 188 52-257 108-298 (337)
44 3nol_A Glutamine cyclotransfer 97.8 0.0023 7.8E-08 68.8 23.4 154 52-221 51-211 (262)
45 1r5m_A SIR4-interacting protei 97.8 0.024 8.3E-07 62.5 32.9 190 52-257 56-280 (425)
46 3u4y_A Uncharacterized protein 97.8 0.018 6.1E-07 61.9 30.4 219 22-258 23-255 (331)
47 3u4y_A Uncharacterized protein 97.8 0.069 2.3E-06 57.3 34.4 192 53-257 9-209 (331)
48 3vl1_A 26S proteasome regulato 97.7 0.027 9.3E-07 62.6 31.4 152 52-219 67-220 (420)
49 1p22_A F-BOX/WD-repeat protein 97.7 0.011 3.7E-07 67.1 28.3 184 52-257 142-327 (435)
50 3sjl_D Methylamine dehydrogena 97.7 0.044 1.5E-06 62.2 33.0 188 49-257 40-258 (386)
51 4ery_A WD repeat-containing pr 97.7 0.07 2.4E-06 57.0 33.3 190 52-257 34-225 (312)
52 4aez_A CDC20, WD repeat-contai 97.7 0.049 1.7E-06 60.9 33.0 188 53-257 103-295 (401)
53 1qks_A Cytochrome CD1 nitrite 97.7 0.1 3.5E-06 62.2 37.4 220 23-255 181-421 (567)
54 1jmx_B Amine dehydrogenase; ox 97.7 0.0055 1.9E-07 66.1 24.1 139 22-173 24-185 (349)
55 4gqb_B Methylosome protein 50; 97.7 0.0023 7.9E-08 71.1 21.0 192 53-257 93-291 (344)
56 3c75_H MADH, methylamine dehyd 97.7 0.067 2.3E-06 61.5 33.6 189 50-257 81-297 (426)
57 1gxr_A ESG1, transducin-like e 97.6 0.077 2.6E-06 56.4 32.0 188 52-257 62-257 (337)
58 3v7d_B Cell division control p 97.6 0.054 1.8E-06 61.4 32.3 185 52-257 216-423 (464)
59 2aq5_A Coronin-1A; WD40 repeat 97.6 0.0076 2.6E-07 67.3 24.8 195 52-257 93-301 (402)
60 3zwl_B Eukaryotic translation 97.6 0.1 3.5E-06 56.1 32.7 190 52-257 43-251 (369)
61 3ow8_A WD repeat-containing pr 97.5 0.068 2.3E-06 58.1 30.4 189 52-257 91-281 (321)
62 4ery_A WD repeat-containing pr 97.5 0.015 5.3E-07 62.2 24.7 192 52-257 76-270 (312)
63 1jmx_B Amine dehydrogenase; ox 97.5 0.012 3.9E-07 63.5 23.7 152 53-220 10-184 (349)
64 1q7f_A NHL, brain tumor CG1071 97.5 0.037 1.3E-06 58.4 27.3 154 52-219 87-245 (286)
65 3mkq_A Coatomer beta'-subunit; 97.5 0.079 2.7E-06 64.6 33.8 192 52-257 24-219 (814)
66 2ynn_A Coatomer subunit beta'; 97.5 0.069 2.4E-06 57.3 29.6 199 41-257 16-219 (304)
67 1q7f_A NHL, brain tumor CG1071 97.5 0.077 2.6E-06 55.9 28.9 151 53-218 40-200 (286)
68 1r5m_A SIR4-interacting protei 97.5 0.026 8.9E-07 62.2 26.1 187 52-257 119-321 (425)
69 4aez_A CDC20, WD repeat-contai 97.4 0.019 6.6E-07 64.2 24.9 191 54-257 187-382 (401)
70 3hfq_A Uncharacterized protein 97.4 0.2 6.8E-06 54.3 33.8 193 55-257 4-222 (347)
71 2iwa_A Glutamine cyclotransfer 97.4 0.0089 3E-07 64.5 20.9 153 95-266 30-191 (266)
72 1sq9_A Antiviral protein SKI8; 97.4 0.015 5.3E-07 64.0 23.6 154 52-219 136-330 (397)
73 3fvz_A Peptidyl-glycine alpha- 97.3 0.15 5.2E-06 55.5 30.1 145 64-218 70-234 (329)
74 3vl1_A 26S proteasome regulato 97.3 0.0098 3.3E-07 66.3 20.7 193 52-257 108-324 (420)
75 1p22_A F-BOX/WD-repeat protein 97.3 0.036 1.2E-06 62.7 25.3 185 52-257 182-367 (435)
76 2mad_H Methylamine dehydrogena 97.3 0.37 1.3E-05 54.0 36.5 185 51-257 30-245 (373)
77 3zwl_B Eukaryotic translation 97.3 0.074 2.5E-06 57.2 26.1 193 52-257 126-348 (369)
78 3sfz_A APAF-1, apoptotic pepti 97.2 0.22 7.6E-06 64.1 34.7 155 52-219 626-782 (1249)
79 3mbr_X Glutamine cyclotransfer 97.2 0.038 1.3E-06 58.6 22.6 160 89-269 25-192 (243)
80 3nok_A Glutaminyl cyclase; bet 97.2 0.011 3.8E-07 63.5 18.1 154 95-268 63-222 (268)
81 3hx6_A Type 4 fimbrial biogene 97.2 0.011 3.7E-07 69.7 19.4 153 53-215 85-288 (570)
82 1vyh_C Platelet-activating fac 97.2 0.3 1E-05 54.8 31.2 152 52-217 119-271 (410)
83 3nol_A Glutamine cyclotransfer 97.2 0.017 5.7E-07 62.1 19.1 155 96-269 52-214 (262)
84 1ri6_A Putative isomerase YBHE 97.2 0.35 1.2E-05 51.4 34.5 188 53-254 4-208 (343)
85 2mad_H Methylamine dehydrogena 97.2 0.29 9.9E-06 54.9 30.3 147 51-214 75-246 (373)
86 4a11_B DNA excision repair pro 97.1 0.22 7.6E-06 54.3 28.7 195 52-257 55-278 (408)
87 1pgu_A Actin interacting prote 97.1 0.66 2.3E-05 53.9 36.2 115 53-172 219-337 (615)
88 3c75_H MADH, methylamine dehyd 97.1 0.083 2.9E-06 60.7 25.4 228 23-258 103-405 (426)
89 1got_B GT-beta; complex (GTP-b 97.1 0.22 7.4E-06 54.3 27.5 190 52-257 108-303 (340)
90 3i2n_A WD repeat-containing pr 97.0 0.48 1.6E-05 50.7 30.1 197 53-257 30-245 (357)
91 1erj_A Transcriptional repress 97.0 0.63 2.1E-05 51.8 32.5 191 52-257 75-289 (393)
92 3sjl_D Methylamine dehydrogena 97.0 0.084 2.9E-06 59.9 23.9 150 51-214 87-259 (386)
93 4g56_B MGC81050 protein; prote 97.0 0.0046 1.6E-07 68.6 13.1 193 53-257 105-303 (357)
94 2pbi_B Guanine nucleotide-bind 97.0 0.33 1.1E-05 53.4 28.1 192 52-257 75-317 (354)
95 3i2n_A WD repeat-containing pr 96.9 0.15 5.3E-06 54.6 24.7 196 53-257 80-293 (357)
96 2ynn_A Coatomer subunit beta'; 96.9 0.56 1.9E-05 50.1 29.0 192 52-257 66-261 (304)
97 3odt_A Protein DOA1; ubiquitin 96.9 0.11 3.9E-06 54.5 23.1 183 52-257 113-298 (313)
98 2qc5_A Streptogramin B lactona 96.9 0.52 1.8E-05 49.1 28.2 183 53-257 30-219 (300)
99 3sfz_A APAF-1, apoptotic pepti 96.9 0.4 1.4E-05 61.7 31.9 154 95-264 626-782 (1249)
100 3odt_A Protein DOA1; ubiquitin 96.9 0.05 1.7E-06 57.3 19.6 150 52-219 154-304 (313)
101 3mkq_A Coatomer beta'-subunit; 96.8 0.96 3.3E-05 54.9 33.4 148 95-257 24-174 (814)
102 1sq9_A Antiviral protein SKI8; 96.8 0.049 1.7E-06 59.9 19.6 110 55-171 199-330 (397)
103 3hfq_A Uncharacterized protein 96.8 0.81 2.8E-05 49.3 31.2 196 53-254 50-270 (347)
104 2z2n_A Virginiamycin B lyase; 96.8 0.67 2.3E-05 48.3 28.1 183 53-257 25-214 (299)
105 2aq5_A Coronin-1A; WD40 repeat 96.8 0.24 8.3E-06 55.0 25.1 187 59-257 53-256 (402)
106 3mmy_A MRNA export factor; mRN 96.7 0.1 3.6E-06 56.0 21.3 187 52-257 97-306 (368)
107 2z2n_A Virginiamycin B lyase; 96.7 0.23 7.8E-06 51.9 23.4 182 53-257 109-297 (299)
108 3jrp_A Fusion protein of prote 96.7 0.52 1.8E-05 50.7 26.8 195 52-257 22-242 (379)
109 3lrv_A PRE-mRNA-splicing facto 96.7 0.12 4.2E-06 56.2 21.4 157 52-218 138-299 (343)
110 2pbi_B Guanine nucleotide-bind 96.6 0.19 6.5E-06 55.3 22.8 154 52-217 165-321 (354)
111 3k26_A Polycomb protein EED; W 96.6 0.14 4.8E-06 55.1 21.3 152 53-216 34-197 (366)
112 3gre_A Serine/threonine-protei 96.6 1.3 4.3E-05 49.4 30.6 200 52-257 75-294 (437)
113 3mmy_A MRNA export factor; mRN 96.6 0.25 8.6E-06 52.9 22.9 150 54-218 55-206 (368)
114 3k26_A Polycomb protein EED; W 96.6 0.15 5.1E-06 54.8 21.0 107 53-167 85-196 (366)
115 2qc5_A Streptogramin B lactona 96.6 0.32 1.1E-05 50.8 23.1 183 53-257 72-261 (300)
116 3frx_A Guanine nucleotide-bind 96.5 0.81 2.8E-05 49.2 26.8 191 52-257 76-269 (319)
117 4a11_B DNA excision repair pro 96.5 0.18 6E-06 55.2 21.1 195 52-257 155-367 (408)
118 1erj_A Transcriptional repress 96.4 0.27 9.2E-06 54.8 22.8 112 52-171 134-246 (393)
119 3fvz_A Peptidyl-glycine alpha- 96.4 0.75 2.6E-05 49.9 25.8 161 53-218 101-284 (329)
120 4g56_B MGC81050 protein; prote 96.4 0.099 3.4E-06 57.8 18.8 192 52-257 53-260 (357)
121 4gqb_B Methylosome protein 50; 96.4 0.11 3.7E-06 57.5 18.9 152 52-215 138-293 (344)
122 1got_B GT-beta; complex (GTP-b 96.4 1.5 5E-05 47.5 34.6 188 52-257 66-259 (340)
123 1k8k_C P40, ARP2/3 complex 41 96.4 0.62 2.1E-05 50.2 24.6 191 52-255 63-274 (372)
124 2oiz_A Aromatic amine dehydrog 96.3 0.31 1.1E-05 54.1 21.9 200 51-256 59-335 (361)
125 4aow_A Guanine nucleotide-bind 96.3 0.18 6E-06 53.8 19.2 110 54-173 186-296 (340)
126 4gga_A P55CDC, cell division c 96.2 2.1 7.1E-05 47.8 32.7 146 56-216 118-266 (420)
127 4aow_A Guanine nucleotide-bind 96.2 0.37 1.3E-05 51.2 21.5 189 52-257 139-339 (340)
128 3gre_A Serine/threonine-protei 96.2 0.32 1.1E-05 54.4 21.7 158 52-218 181-366 (437)
129 2oiz_A Aromatic amine dehydrog 96.2 2 7E-05 47.4 31.9 109 52-169 14-146 (361)
130 1yfq_A Cell cycle arrest prote 96.1 0.16 5.3E-06 54.4 17.9 187 52-257 67-284 (342)
131 1pgu_A Actin interacting prote 96.1 0.27 9.1E-06 57.3 21.0 187 52-257 127-330 (615)
132 3lrv_A PRE-mRNA-splicing facto 96.0 2.1 7.3E-05 46.1 28.0 187 55-256 96-293 (343)
133 1vyh_C Platelet-activating fac 96.0 0.66 2.2E-05 52.0 22.9 159 52-218 203-376 (410)
134 3jrp_A Fusion protein of prote 96.0 0.7 2.4E-05 49.7 22.3 200 53-257 69-289 (379)
135 1rwi_B Serine/threonine-protei 95.9 0.57 1.9E-05 48.4 20.7 183 53-255 34-222 (270)
136 2pm9_A Protein WEB1, protein t 95.9 0.32 1.1E-05 53.6 19.6 197 52-257 78-296 (416)
137 4asc_A Kelch repeat and BTB do 95.9 1.3 4.4E-05 47.6 24.0 189 22-228 16-236 (315)
138 3ei3_B DNA damage-binding prot 95.9 1.2 4E-05 48.7 23.8 187 54-257 87-284 (383)
139 4ggc_A P55CDC, cell division c 95.8 2.2 7.7E-05 44.5 32.0 148 56-218 38-188 (318)
140 3scy_A Hypothetical bacterial 95.8 2.8 9.6E-05 45.3 36.9 195 55-258 15-245 (361)
141 2vdu_B TRNA (guanine-N(7)-)-me 95.8 0.5 1.7E-05 53.5 20.9 159 52-220 113-280 (450)
142 1k8k_C P40, ARP2/3 complex 41 95.7 0.52 1.8E-05 50.8 20.1 146 52-211 107-274 (372)
143 4h5i_A Guanine nucleotide-exch 95.7 2.2 7.5E-05 46.9 25.5 153 96-257 146-302 (365)
144 3hx6_A Type 4 fimbrial biogene 95.7 0.19 6.5E-06 59.2 16.9 157 96-257 85-286 (570)
145 1ri6_A Putative isomerase YBHE 95.7 2.7 9.2E-05 44.4 36.4 191 52-254 48-261 (343)
146 3f3f_A Nucleoporin SEH1; struc 95.7 1.1 3.6E-05 47.2 21.7 111 52-167 22-147 (351)
147 3iz6_a 40S ribosomal protein R 95.6 0.82 2.8E-05 50.5 21.5 155 53-218 170-336 (380)
148 2hqs_A Protein TOLB; TOLB, PAL 95.6 0.85 2.9E-05 51.4 21.9 188 52-257 189-389 (415)
149 1rwi_B Serine/threonine-protei 95.6 0.36 1.2E-05 50.0 17.3 145 53-213 77-224 (270)
150 1pjx_A Dfpase, DIISOPROPYLFLUO 95.5 0.59 2E-05 49.4 18.9 147 53-214 28-211 (314)
151 2pm9_A Protein WEB1, protein t 95.4 0.26 9E-06 54.2 16.2 191 53-257 126-339 (416)
152 3ei3_B DNA damage-binding prot 95.3 4 0.00014 44.3 26.4 151 53-219 131-290 (383)
153 2vdu_B TRNA (guanine-N(7)-)-me 95.2 0.65 2.2E-05 52.5 19.4 72 53-125 210-281 (450)
154 1yfq_A Cell cycle arrest prote 95.2 0.43 1.5E-05 50.9 17.0 183 52-256 22-226 (342)
155 2fp8_A Strictosidine synthase; 95.2 1.8 6.2E-05 46.5 22.1 185 53-255 91-313 (322)
156 3g4e_A Regucalcin; six bladed 95.2 2.9 9.8E-05 44.4 23.4 148 53-216 24-187 (297)
157 3vu4_A KMHSV2; beta-propeller 95.2 1.7 5.9E-05 47.5 22.1 72 52-127 30-102 (355)
158 2p4o_A Hypothetical protein; p 95.2 3.5 0.00012 44.1 24.1 146 53-214 42-202 (306)
159 2woz_A Kelch repeat and BTB do 95.1 4.5 0.00015 43.4 25.7 161 51-228 54-246 (318)
160 2vpj_A Kelch-like protein 12; 95.1 3.2 0.00011 43.9 23.3 190 53-257 14-233 (301)
161 3jro_A Fusion protein of prote 94.9 0.98 3.4E-05 55.3 20.8 194 52-257 20-240 (753)
162 3e5z_A Putative gluconolactona 94.9 3.8 0.00013 43.0 23.0 64 55-122 42-106 (296)
163 4e54_B DNA damage-binding prot 94.9 2.1 7.2E-05 48.0 22.2 191 53-257 132-329 (435)
164 3dw8_B Serine/threonine-protei 94.8 1.8 6.2E-05 48.0 21.4 68 52-119 39-130 (447)
165 2ecf_A Dipeptidyl peptidase IV 94.8 9.3 0.00032 45.8 29.4 109 51-168 46-186 (741)
166 3frx_A Guanine nucleotide-bind 94.7 4.3 0.00015 43.4 23.3 187 52-256 118-318 (319)
167 1jof_A Carboxy-CIS,CIS-muconat 94.7 6.2 0.00021 43.0 29.5 156 52-215 50-230 (365)
168 4asc_A Kelch repeat and BTB do 94.6 2.7 9.2E-05 45.1 21.5 185 55-257 6-223 (315)
169 4gga_A P55CDC, cell division c 94.6 6.9 0.00024 43.4 27.8 190 52-257 158-355 (420)
170 1zgk_A Kelch-like ECH-associat 94.6 3.3 0.00011 44.3 22.0 197 45-257 16-242 (308)
171 3hrp_A Uncharacterized protein 94.6 5.1 0.00018 45.1 24.6 148 52-213 140-299 (409)
172 3pe7_A Oligogalacturonate lyas 94.6 0.82 2.8E-05 49.9 17.4 72 51-125 45-121 (388)
173 3v9f_A Two-component system se 94.6 9.8 0.00034 46.4 28.8 152 53-216 323-483 (781)
174 3dm0_A Maltose-binding peripla 94.6 1.9 6.3E-05 51.9 21.9 192 52-257 441-634 (694)
175 1pjx_A Dfpase, DIISOPROPYLFLUO 94.5 5.4 0.00019 41.7 24.0 187 54-255 83-299 (314)
176 3e5z_A Putative gluconolactona 94.4 1.1 3.8E-05 47.2 17.5 137 62-217 152-292 (296)
177 3iz6_a 40S ribosomal protein R 94.4 1.2 4.1E-05 49.1 18.4 120 52-171 217-337 (380)
178 2xn4_A Kelch-like protein 2; s 94.3 5.2 0.00018 42.4 22.6 188 53-257 15-231 (302)
179 1mda_H Methylamine dehydrogena 94.3 4.1 0.00014 45.6 22.4 181 52-257 30-242 (368)
180 2xyi_A Probable histone-bindin 94.3 2.9 0.0001 46.9 21.5 187 54-255 142-353 (430)
181 2hqs_A Protein TOLB; TOLB, PAL 94.2 4.5 0.00015 45.4 22.9 188 53-257 143-346 (415)
182 3dm0_A Maltose-binding peripla 94.2 2.7 9.2E-05 50.4 22.2 190 53-257 395-594 (694)
183 1nr0_A Actin interacting prote 94.1 12 0.00041 44.0 37.4 151 52-214 201-358 (611)
184 3ii7_A Kelch-like protein 7; p 94.1 7.1 0.00024 41.3 25.4 190 52-257 54-274 (306)
185 3f3f_A Nucleoporin SEH1; struc 94.0 3.2 0.00011 43.3 19.9 71 53-123 71-151 (351)
186 2dg1_A DRP35, lactonase; beta 94.0 7.6 0.00026 41.2 23.2 151 53-216 55-219 (333)
187 3ii7_A Kelch-like protein 7; p 93.8 5.1 0.00017 42.5 21.4 189 53-257 11-227 (306)
188 2p9w_A MAL S 1 allergenic prot 93.8 6.9 0.00024 43.2 22.5 150 95-255 23-215 (334)
189 2oaj_A Protein SNI1; WD40 repe 93.8 4.6 0.00016 50.6 23.9 197 42-257 21-244 (902)
190 3pe7_A Oligogalacturonate lyas 93.7 3.9 0.00013 44.4 20.6 157 51-215 90-277 (388)
191 1mda_H Methylamine dehydrogena 93.7 1.8 6E-05 48.6 17.9 65 51-115 74-158 (368)
192 3scy_A Hypothetical bacterial 93.6 9.3 0.00032 41.1 32.9 195 52-257 60-295 (361)
193 4h5i_A Guanine nucleotide-exch 93.6 6.1 0.00021 43.3 22.0 70 52-124 144-215 (365)
194 2vpj_A Kelch-like protein 12; 93.4 9 0.00031 40.4 25.4 163 52-228 61-246 (301)
195 2xzm_R RACK1; ribosome, transl 93.4 9.8 0.00033 40.9 22.9 104 52-162 38-148 (343)
196 3fm0_A Protein CIAO1; WDR39,SG 93.3 5.5 0.00019 43.1 20.9 107 52-165 27-138 (345)
197 3hrp_A Uncharacterized protein 93.1 14 0.00047 41.6 25.8 154 52-215 181-358 (409)
198 4ggc_A P55CDC, cell division c 93.1 9.4 0.00032 39.6 25.7 191 52-257 78-275 (318)
199 2zux_A YESW protein; beta-prop 93.0 2 7E-05 50.4 17.2 144 65-219 231-408 (591)
200 3jro_A Fusion protein of prote 92.8 2.1 7.3E-05 52.2 18.2 199 53-256 67-286 (753)
201 1fwx_A Nitrous oxide reductase 92.8 5 0.00017 47.7 20.4 143 52-211 146-361 (595)
202 2ghs_A AGR_C_1268P; regucalcin 92.7 10 0.00036 40.7 21.9 143 53-212 60-213 (326)
203 2p4o_A Hypothetical protein; p 92.7 12 0.0004 39.9 22.0 150 53-215 82-245 (306)
204 3dwl_C Actin-related protein 2 92.4 0.52 1.8E-05 51.3 10.9 106 52-166 22-134 (377)
205 4gq1_A NUP37; propeller, trans 92.1 17 0.00057 40.1 23.4 109 55-170 103-225 (393)
206 2xdw_A Prolyl endopeptidase; a 92.0 5.8 0.0002 47.8 20.6 155 52-218 135-328 (710)
207 2ecf_A Dipeptidyl peptidase IV 92.0 13 0.00044 44.5 23.6 155 52-218 119-328 (741)
208 2oaj_A Protein SNI1; WD40 repe 92.0 3.7 0.00013 51.5 19.2 151 53-217 69-248 (902)
209 2xyi_A Probable histone-bindin 92.0 8.1 0.00028 43.1 20.5 145 55-211 196-353 (430)
210 3g4e_A Regucalcin; six bladed 91.9 14 0.00048 38.9 25.4 152 53-219 64-237 (297)
211 2ymu_A WD-40 repeat protein; u 91.9 21 0.00073 40.8 35.8 182 52-254 273-456 (577)
212 3v9f_A Two-component system se 91.9 3 0.0001 51.0 18.0 149 53-215 417-572 (781)
213 1nr0_A Actin interacting prote 91.8 9.7 0.00033 44.9 21.8 185 55-257 162-357 (611)
214 2ymu_A WD-40 repeat protein; u 91.7 22 0.00076 40.7 38.4 108 52-170 191-299 (577)
215 3dw8_B Serine/threonine-protei 91.6 1.4 5E-05 48.8 13.6 152 52-215 188-377 (447)
216 1zgk_A Kelch-like ECH-associat 91.5 16 0.00055 38.7 22.8 190 52-257 69-289 (308)
217 3tc9_A Hypothetical hydrolase; 91.5 16 0.00053 41.5 22.3 150 53-214 149-306 (430)
218 4a2l_A BT_4663, two-component 91.5 31 0.0011 42.0 31.7 152 53-215 320-484 (795)
219 4a2l_A BT_4663, two-component 91.4 5 0.00017 49.1 19.3 152 53-215 183-343 (795)
220 4hw6_A Hypothetical protein, I 91.3 9 0.00031 43.6 20.1 147 53-214 152-309 (433)
221 3vu4_A KMHSV2; beta-propeller 91.2 19 0.00065 39.0 24.3 144 53-214 110-274 (355)
222 2dg1_A DRP35, lactonase; beta 91.2 17 0.00058 38.4 23.1 150 53-218 97-269 (333)
223 3qqz_A Putative uncharacterize 91.2 16 0.00054 38.7 20.4 70 52-123 37-108 (255)
224 2qe8_A Uncharacterized protein 91.0 8.3 0.00028 41.8 18.8 112 53-170 27-160 (343)
225 2xdw_A Prolyl endopeptidase; a 91.0 6.9 0.00024 47.1 19.7 155 52-213 243-416 (710)
226 2ojh_A Uncharacterized protein 90.7 15 0.00052 37.1 23.8 102 104-214 20-122 (297)
227 2z3z_A Dipeptidyl aminopeptida 90.7 5.4 0.00019 47.6 18.2 104 53-168 35-160 (706)
228 2woz_A Kelch repeat and BTB do 90.6 17 0.00059 38.7 20.5 159 53-228 15-199 (318)
229 2p9w_A MAL S 1 allergenic prot 90.0 4.8 0.00016 44.5 15.3 153 53-210 24-214 (334)
230 2zuy_A YESX protein; beta-prop 88.8 11 0.00037 44.6 17.7 144 65-219 235-412 (620)
231 3dr2_A Exported gluconolactona 88.5 4.2 0.00014 43.2 13.5 131 62-209 168-304 (305)
232 2j04_A TAU60, YPL007P, hypothe 88.5 8.3 0.00028 45.8 16.9 109 51-170 139-262 (588)
233 1jof_A Carboxy-CIS,CIS-muconat 88.3 32 0.0011 37.2 33.9 192 55-257 4-228 (365)
234 4e54_B DNA damage-binding prot 88.2 2.7 9.1E-05 47.2 12.2 154 53-218 177-334 (435)
235 2ghs_A AGR_C_1268P; regucalcin 88.1 31 0.001 36.9 22.1 148 53-218 100-266 (326)
236 2xn4_A Kelch-like protein 2; s 88.1 28 0.00097 36.5 25.1 190 52-257 60-278 (302)
237 1z68_A Fibroblast activation p 87.8 3.7 0.00013 49.2 13.9 105 53-167 26-143 (719)
238 2uvk_A YJHT; unknown function, 87.8 33 0.0011 37.0 23.9 158 53-221 19-236 (357)
239 3dr2_A Exported gluconolactona 87.6 30 0.001 36.3 20.2 146 53-213 56-226 (305)
240 2xzm_R RACK1; ribosome, transl 87.5 33 0.0011 36.6 23.7 150 52-211 87-244 (343)
241 2pm7_B Protein transport prote 87.2 31 0.0011 36.0 23.8 109 52-165 20-134 (297)
242 2fp8_A Strictosidine synthase; 87.0 18 0.00062 38.5 17.5 145 55-212 32-217 (322)
243 1fwx_A Nitrous oxide reductase 86.7 11 0.00036 45.0 16.3 75 52-126 100-195 (595)
244 3fm0_A Protein CIAO1; WDR39,SG 86.7 16 0.00056 39.2 17.1 67 52-118 72-139 (345)
245 3dwl_C Actin-related protein 2 86.6 5.3 0.00018 43.1 13.1 67 52-118 66-134 (377)
246 2uvk_A YJHT; unknown function, 86.3 40 0.0014 36.3 21.6 194 52-257 64-344 (357)
247 2w18_A PALB2, fancn, partner a 86.2 46 0.0016 37.0 22.8 153 53-218 144-321 (356)
248 3c5m_A Oligogalacturonate lyas 86.1 12 0.00042 40.2 15.8 156 52-215 91-277 (396)
249 1npe_A Nidogen, entactin; glyc 86.1 33 0.0011 35.2 20.7 149 53-219 90-246 (267)
250 1npe_A Nidogen, entactin; glyc 85.4 35 0.0012 35.0 25.8 192 52-264 46-246 (267)
251 2zwa_A Leucine carboxyl methyl 85.3 65 0.0022 38.9 23.1 194 52-257 396-637 (695)
252 3elq_A Arylsulfate sulfotransf 85.0 36 0.0012 40.2 19.6 122 96-221 366-550 (571)
253 2qe8_A Uncharacterized protein 84.5 46 0.0016 35.7 19.5 70 53-123 77-161 (343)
254 3elq_A Arylsulfate sulfotransf 84.5 9.4 0.00032 45.1 14.4 98 23-125 178-302 (571)
255 2ece_A 462AA long hypothetical 83.6 69 0.0024 36.8 25.5 167 53-221 25-247 (462)
256 1yr2_A Prolyl oligopeptidase; 82.7 41 0.0014 40.5 19.9 62 155-218 295-357 (741)
257 2ojh_A Uncharacterized protein 82.6 43 0.0015 33.6 27.4 141 61-215 20-166 (297)
258 2z3z_A Dipeptidyl aminopeptida 81.9 89 0.003 36.9 32.4 149 54-213 93-295 (706)
259 3iuj_A Prolyl endopeptidase; h 81.2 71 0.0024 38.2 21.1 62 154-218 259-322 (693)
260 1xfd_A DIP, dipeptidyl aminope 81.1 73 0.0025 37.6 21.0 64 52-120 71-148 (723)
261 3azo_A Aminopeptidase; POP fam 80.7 46 0.0016 39.0 18.9 151 51-214 139-328 (662)
262 3m0c_C LDL receptor, low-densi 80.5 1.2E+02 0.004 37.4 26.8 190 53-257 435-634 (791)
263 3azo_A Aminopeptidase; POP fam 79.2 65 0.0022 37.7 19.5 68 51-118 197-277 (662)
264 2hes_X YDR267CP; beta-propelle 79.1 69 0.0024 33.9 22.8 62 54-115 25-89 (330)
265 2bkl_A Prolyl endopeptidase; m 78.8 64 0.0022 38.5 19.5 67 51-119 77-160 (695)
266 3c5m_A Oligogalacturonate lyas 78.7 42 0.0014 35.9 16.4 69 52-123 46-119 (396)
267 1yr2_A Prolyl oligopeptidase; 78.1 84 0.0029 37.8 20.4 74 52-125 278-360 (741)
268 1xfd_A DIP, dipeptidyl aminope 77.4 44 0.0015 39.6 17.5 106 54-168 28-148 (723)
269 3amr_A 3-phytase; beta-propell 77.4 93 0.0032 34.5 23.4 196 54-265 41-273 (355)
270 4gq1_A NUP37; propeller, trans 75.7 74 0.0025 34.7 17.6 70 53-123 156-226 (393)
271 3o4h_A Acylamino-acid-releasin 75.1 1.2E+02 0.0042 34.7 20.5 103 146-257 123-229 (582)
272 2zux_A YESW protein; beta-prop 75.1 71 0.0024 37.6 17.3 110 63-174 151-314 (591)
273 1ijq_A LDL receptor, low-densi 74.9 92 0.0031 33.1 20.5 147 53-216 88-243 (316)
274 2j04_B YDR362CP, TAU91; beta p 74.9 38 0.0013 39.4 15.5 154 53-217 225-392 (524)
275 2j04_B YDR362CP, TAU91; beta p 74.1 38 0.0013 39.4 15.2 111 53-171 277-394 (524)
276 3iuj_A Prolyl endopeptidase; h 72.0 1.1E+02 0.0036 36.7 19.0 63 63-125 259-325 (693)
277 3o4h_A Acylamino-acid-releasin 71.6 57 0.002 37.6 16.1 67 51-119 159-231 (582)
278 2j04_A TAU60, YPL007P, hypothe 71.5 52 0.0018 39.0 15.3 148 51-214 95-257 (588)
279 3bg1_A Protein SEC13 homolog; 70.2 29 0.00097 36.7 12.0 66 52-117 24-92 (316)
280 3ott_A Two-component system se 69.0 94 0.0032 37.4 17.7 149 53-215 383-549 (758)
281 2zwa_A Leucine carboxyl methyl 68.9 75 0.0026 38.3 16.6 156 53-217 451-639 (695)
282 1k3i_A Galactose oxidase precu 68.4 1.3E+02 0.0045 35.6 18.5 68 52-123 252-329 (656)
283 1ijq_A LDL receptor, low-densi 68.4 1.3E+02 0.0043 32.0 28.2 188 53-257 41-240 (316)
284 1k32_A Tricorn protease; prote 68.1 83 0.0028 39.5 17.5 103 53-165 348-463 (1045)
285 4hw6_A Hypothetical protein, I 68.1 1.6E+02 0.0055 33.1 21.5 199 53-265 192-431 (433)
286 3v65_B Low-density lipoprotein 68.0 1.5E+02 0.005 32.6 24.1 186 53-257 127-320 (386)
287 1k32_A Tricorn protease; prote 67.9 1.7E+02 0.0057 36.7 20.3 145 53-213 308-463 (1045)
288 3sov_A LRP-6, low-density lipo 66.9 1.4E+02 0.0048 32.0 24.8 187 53-257 46-240 (318)
289 2w18_A PALB2, fancn, partner a 66.6 1.6E+02 0.0055 32.6 24.9 147 104-257 155-316 (356)
290 2bkl_A Prolyl endopeptidase; m 66.2 2.1E+02 0.0073 33.8 23.1 143 63-219 147-313 (695)
291 2zuy_A YESX protein; beta-prop 65.1 27 0.00094 41.3 11.0 107 56-173 286-414 (620)
292 1z68_A Fibroblast activation p 64.6 1.2E+02 0.0041 35.8 17.3 65 51-119 69-143 (719)
293 2oit_A Nucleoporin 214KDA; NH2 64.5 1.8E+02 0.0062 32.4 21.2 112 52-171 103-230 (434)
294 1n7d_A LDL receptor, low-densi 62.3 66 0.0023 38.9 14.3 188 53-257 417-616 (699)
295 3ott_A Two-component system se 61.7 1.2E+02 0.0043 36.3 16.8 148 52-215 428-590 (758)
296 3kya_A Putative phosphatase; s 61.4 2.4E+02 0.008 32.7 21.6 152 53-214 151-346 (496)
297 3p5b_L Low density lipoprotein 59.3 2.1E+02 0.0073 31.5 28.4 190 53-257 123-322 (400)
298 1k3i_A Galactose oxidase precu 58.5 64 0.0022 38.3 13.2 142 65-218 168-328 (656)
299 2hes_X YDR267CP; beta-propelle 57.0 1.9E+02 0.0066 30.3 22.0 65 52-116 69-139 (330)
300 3sre_A PON1, serum paraoxonase 56.3 2.4E+02 0.008 31.1 21.6 74 53-127 60-162 (355)
301 1xip_A Nucleoporin NUP159; bet 54.8 2.6E+02 0.0089 31.1 20.5 109 95-224 96-204 (388)
302 3amr_A 3-phytase; beta-propell 52.4 2.2E+02 0.0077 31.4 15.1 100 55-162 145-262 (355)
303 3v64_C Agrin; beta propeller, 51.5 2.6E+02 0.0089 30.1 24.2 187 52-257 83-277 (349)
304 2pm7_B Protein transport prote 50.3 2.3E+02 0.0078 29.1 21.7 65 53-117 67-134 (297)
305 2ism_A Putative oxidoreductase 50.3 2.7E+02 0.0093 30.0 21.3 20 53-74 41-60 (352)
306 3s94_A LRP-6, low-density lipo 48.9 3.9E+02 0.013 31.5 24.8 185 52-257 50-245 (619)
307 3v65_B Low-density lipoprotein 45.6 3.3E+02 0.011 29.7 27.0 183 53-254 87-276 (386)
308 2oit_A Nucleoporin 214KDA; NH2 43.3 3.8E+02 0.013 29.7 19.2 109 95-216 103-227 (434)
309 3sov_A LRP-6, low-density lipo 42.1 3.4E+02 0.012 28.8 25.0 182 55-254 6-196 (318)
310 1n7d_A LDL receptor, low-densi 41.1 71 0.0024 38.6 9.7 68 145-218 551-621 (699)
311 2gop_A Trilobed protease; beta 36.7 3.7E+02 0.013 27.7 18.5 64 52-118 69-164 (347)
312 3a9g_A Putative uncharacterize 36.2 4.4E+02 0.015 28.4 17.5 21 53-74 39-59 (354)
313 3m0c_C LDL receptor, low-densi 34.9 7E+02 0.024 30.4 28.3 183 55-254 397-588 (791)
314 3p5b_L Low density lipoprotein 33.5 5.1E+02 0.018 28.3 26.7 58 55-115 85-143 (400)
315 1tl2_A L10, protein (tachylect 33.1 88 0.003 32.6 7.4 96 53-166 51-156 (236)
316 4h3o_A Lectin; cadmium, plant 30.9 2.2E+02 0.0077 25.2 9.1 61 94-172 18-78 (105)
317 4h3o_A Lectin; cadmium, plant 30.8 2.1E+02 0.0073 25.4 8.9 56 58-125 24-79 (105)
318 3tc9_A Hypothetical hydrolase; 30.6 5.9E+02 0.02 28.2 24.9 102 53-162 190-300 (430)
319 1xd5_A Gastrodianin-1, antifun 30.0 2.6E+02 0.009 24.9 9.5 80 60-170 26-106 (112)
320 4a0p_A LRP6, LRP-6, low-densit 29.7 7.5E+02 0.026 29.1 27.2 61 55-116 8-69 (628)
321 2xzh_A Clathrin heavy chain 1; 29.2 1.7E+02 0.0059 32.3 9.3 63 52-115 270-332 (365)
322 3mez_B Mannose-specific lectin 28.9 2.5E+02 0.0086 25.2 9.2 61 54-125 25-85 (113)
323 4a5s_A Dipeptidyl peptidase 4 28.8 7.8E+02 0.027 29.0 26.6 102 53-166 27-144 (740)
324 2ece_A 462AA long hypothetical 28.1 7.2E+02 0.025 28.4 30.8 192 52-254 94-351 (462)
325 3sd2_A Putative member of DUF3 28.0 73 0.0025 28.8 5.0 25 730-754 44-68 (101)
326 4a5s_A Dipeptidyl peptidase 4 27.4 8.2E+02 0.028 28.8 19.9 65 50-119 70-145 (740)
327 4a0p_A LRP6, LRP-6, low-densit 27.0 8.3E+02 0.028 28.7 26.2 185 52-257 47-239 (628)
328 2gop_A Trilobed protease; beta 26.5 5.4E+02 0.019 26.4 15.8 56 62-123 42-102 (347)
329 3a0c_A Mannose/sialic acid-bin 26.0 3.1E+02 0.011 24.4 9.2 56 57-125 24-79 (110)
330 2xe4_A Oligopeptidase B; hydro 24.3 9.6E+02 0.033 28.6 19.3 59 153-212 294-355 (751)
331 3mez_B Mannose-specific lectin 24.2 1.8E+02 0.0063 26.2 7.3 62 94-172 23-84 (113)
332 3s94_A LRP-6, low-density lipo 24.1 9.1E+02 0.031 28.2 22.8 183 53-257 360-553 (619)
333 3a0c_A Mannose/sialic acid-bin 23.9 1.4E+02 0.0048 26.8 6.4 58 95-171 20-77 (110)
334 3v64_C Agrin; beta propeller, 22.7 7.1E+02 0.024 26.5 28.3 183 53-254 44-233 (349)
335 1bpo_A Protein (clathrin); cla 22.2 2.5E+02 0.0085 32.3 9.1 62 52-114 269-330 (494)
336 3kya_A Putative phosphatase; s 22.1 9.3E+02 0.032 27.6 22.5 63 52-114 203-277 (496)
337 2xbg_A YCF48-like protein; pho 21.6 7.1E+02 0.024 26.1 15.1 148 53-218 89-240 (327)
338 1tl2_A L10, protein (tachylect 21.0 7.1E+02 0.024 25.8 11.6 28 144-171 97-125 (236)
339 3d33_A Domain of unknown funct 20.8 1.5E+02 0.0052 27.0 5.8 25 731-755 49-73 (108)
340 3qqz_A Putative uncharacterize 20.1 7.3E+02 0.025 25.6 22.5 104 95-208 38-150 (255)
No 1
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.75 E-value=8.7e-16 Score=172.94 Aligned_cols=217 Identities=17% Similarity=0.297 Sum_probs=147.2
Q ss_pred cccccEeEEEeccCceee-eeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCC--------cceeeeeeeecC
Q 002016 26 DQVGLMDWHQQYIGKVKH-AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN--------DVVDGIDIALGK 96 (981)
Q Consensus 26 dqvG~~dW~~~~vG~~~~-~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~--------~~i~~l~~~~~~ 96 (981)
+..++..|+.++-+.... ..-..|...+++||+++.+|.|+|+|++||+++|++.+... ..+... +...+
T Consensus 25 ~~~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~ 103 (376)
T 3q7m_A 25 QFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSG 103 (376)
T ss_dssp SSCCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEET
T ss_pred CCcceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeC
Confidence 456789999987322211 11125677799999999999999999999999999998542 112222 34556
Q ss_pred eEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCc
Q 002016 97 YVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE 175 (981)
Q Consensus 97 ~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~ 175 (981)
+.+++++.++.|+++|++||+++|+........ ..+.+ .++.|++. .+|.|+++|++||+++|++....+
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~--~~p~~-------~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL--SRPVV-------SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSSCCC--SCCEE-------ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE--cCCEE-------ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 677777666799999999999999999876543 22222 25677776 589999999999999999987644
Q ss_pred ceeee-EEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCC---------ccCceEEEcCcEEEEEECCC
Q 002016 176 SVEVQ-QVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGG---------FVGDVALVSSDTLVTLDTTR 245 (981)
Q Consensus 176 ~~~~~-~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~---------~~~~~~~vg~~~lv~~d~~~ 245 (981)
..... ...+...++.+|+....| .++++|+.+|+.+|+.....+.+ ....+++.+ +.+++.. .+
T Consensus 175 ~~~~~~~~~~~~~~~~v~~g~~~g----~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~v~~~~-~~ 248 (376)
T 3q7m_A 175 SLSLRGESAPTTAFGAAVVGGDNG----RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN-GVVFALA-YN 248 (376)
T ss_dssp ----CCCCCCEEETTEEEECCTTT----EEEEEETTTCCEEEEEECCC-----------CCCCCCEEET-TEEEEEC-TT
T ss_pred ceeecCCCCcEEECCEEEEEcCCC----EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC-CEEEEEe-cC
Confidence 32100 011123577887743333 69999999999999998765432 223334334 4333332 46
Q ss_pred CeEEEEEeecCee
Q 002016 246 SILVTVSFKNRKI 258 (981)
Q Consensus 246 g~L~v~~L~sg~~ 258 (981)
+.+++++..+|++
T Consensus 249 g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 249 GNLTALDLRSGQI 261 (376)
T ss_dssp SCEEEEETTTCCE
T ss_pred cEEEEEECCCCcE
Confidence 7899999988874
No 2
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.69 E-value=1.7e-15 Score=170.55 Aligned_cols=216 Identities=13% Similarity=0.238 Sum_probs=147.2
Q ss_pred ccccccccEeEEEeccCce------eeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecC
Q 002016 23 LYEDQVGLMDWHQQYIGKV------KHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGK 96 (981)
Q Consensus 23 lyedqvG~~dW~~~~vG~~------~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~ 96 (981)
.++.+.|++.|++.+-+.. .......|...+++||+++.+|.|+|+|++||+++|+..+... +... +...+
T Consensus 67 a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~--~~~~-p~~~~ 143 (376)
T 3q7m_A 67 ALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE--ALSR-PVVSD 143 (376)
T ss_dssp EEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC--CCSC-CEEET
T ss_pred EEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc--eEcC-CEEEC
Confidence 3456689999999873221 1112234556789999999999999999999999999998754 2222 23455
Q ss_pred eEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc---CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEec
Q 002016 97 YVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS---KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF 172 (981)
Q Consensus 97 ~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s---~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~ 172 (981)
+.+++++.++.|+++|+.||+++|+.....+... ...+.+ .++.|++. .+|.|+++|+++|+++|+...
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-------~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-------AFGAAVVGGDNGRVSAVLMEQGQMIWQQRI 216 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-------ETTEEEECCTTTEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-------ECCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 6777777677999999999999999998654320 011222 25567775 589999999999999999986
Q ss_pred cCcce--eeeE-----EEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEEcCcEEEEEECCC
Q 002016 173 AAESV--EVQQ-----VIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTR 245 (981)
Q Consensus 173 ~~~~~--~~~~-----vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~ 245 (981)
..+.. +... ..+...++.+|+.+..| .++++|+.+|+.+|+...... ..+.+.++.+++.+ .+
T Consensus 217 ~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g----~l~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~l~~~~-~~ 286 (376)
T 3q7m_A 217 SQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG----NLTALDLRSGQIMWKRELGSV-----NDFIVDGNRIYLVD-QN 286 (376)
T ss_dssp CC-----------CCCCCCEEETTEEEEECTTS----CEEEEETTTCCEEEEECCCCE-----EEEEEETTEEEEEE-TT
T ss_pred ccCCCCcccccccccCCCcEEECCEEEEEecCc----EEEEEECCCCcEEeeccCCCC-----CCceEECCEEEEEc-CC
Confidence 53311 0011 11124678899876555 499999999999999864322 12333445444444 35
Q ss_pred CeEEEEEeecCee
Q 002016 246 SILVTVSFKNRKI 258 (981)
Q Consensus 246 g~L~v~~L~sg~~ 258 (981)
+.+++++..+|+.
T Consensus 287 g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 287 DRVMALTIDGGVT 299 (376)
T ss_dssp CCEEEEETTTCCE
T ss_pred CeEEEEECCCCcE
Confidence 7899999998884
No 3
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.58 E-value=1.9e-13 Score=164.54 Aligned_cols=230 Identities=15% Similarity=0.167 Sum_probs=146.8
Q ss_pred ccccEeEEEeccCceeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCccee------eeeeeecCeEEE
Q 002016 27 QVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVD------GIDIALGKYVIT 100 (981)
Q Consensus 27 qvG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~------~l~~~~~~~vV~ 100 (981)
..++..|++++-+.........|...+++||+++..+.|+|||++||+++|++.+..+.... .-.++..++.|+
T Consensus 42 ~~~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~ 121 (582)
T 1flg_A 42 FKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVF 121 (582)
T ss_dssp GGCEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEE
T ss_pred CCCcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEE
Confidence 35889999988443221223356667999999999666999999999999999987542110 011234566777
Q ss_pred EEccCCEEEEEeCCCCcEeEEEeccCccc---cCCceeecccccccCCc------EEEEEe-------CCEEEEEECCCC
Q 002016 101 LSSDGSTLRAWNLPDGQMVWESFLRGSKH---SKPLLLVPTNLKVDKDS------LILVSS-------KGCLHAVSSIDG 164 (981)
Q Consensus 101 Vs~~g~~V~A~da~tG~llWe~~~~~~~~---s~~~~~v~~~~~~~~~~------~V~V~~-------~g~l~aLd~~tG 164 (981)
+++.++.|+|+|++||+++|+.+...... ....+++ . ++ .|++.. +|.|+|||++||
T Consensus 122 ~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v------~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 122 FGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTI------V-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp EEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEE------E-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred EEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEE------e-CCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 77666799999999999999998765311 0122222 1 22 666643 689999999999
Q ss_pred cEeEEEeccCcceeee---------------------------------------EEEEeecCCeEEEEEe---------
Q 002016 165 EILWTRDFAAESVEVQ---------------------------------------QVIQLDESDQIYVVGY--------- 196 (981)
Q Consensus 165 ~~~W~~~~~~~~~~~~---------------------------------------~vv~s~~~~~Vyvvg~--------- 196 (981)
+++|+.........+. ........+.||+...
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 9999986532111000 0000124578887553
Q ss_pred ---cC--------CceeEEEEEECCCCceeeeeeeecc--CCcc--CceEEEc----Cc----EEEEEECCCCeEEEEEe
Q 002016 197 ---AG--------SSQFHAYQINAMNGELLNHETAAFS--GGFV--GDVALVS----SD----TLVTLDTTRSILVTVSF 253 (981)
Q Consensus 197 ---~g--------~~~~~v~aLd~~tG~~lw~~~v~~p--~~~~--~~~~~vg----~~----~lv~~d~~~g~L~v~~L 253 (981)
.| .+...|+|||+.||+.+|+++.... ++.. ...+++. ++ .++..+ .+|.++++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~-~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD-RNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC-TTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC-CCceEEEEEC
Confidence 11 0113699999999999999975322 1111 1233332 12 444454 5789999999
Q ss_pred ecCeeeEEEEee
Q 002016 254 KNRKIAFQETHL 265 (981)
Q Consensus 254 ~sg~~~~~~~~l 265 (981)
.+|++ +-++++
T Consensus 354 ~tG~~-lw~~~~ 364 (582)
T 1flg_A 354 SNGKL-QNAFPF 364 (582)
T ss_dssp TTCCE-EEEEES
T ss_pred CCCCE-eccccc
Confidence 99984 343443
No 4
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.55 E-value=3e-13 Score=162.55 Aligned_cols=226 Identities=17% Similarity=0.177 Sum_probs=146.5
Q ss_pred ccEeEEEeccCceeeeeeeecccCCCEEEEEcC-CCEEEEEEC-CCCccceEEEcCCCccee--------eeeeeecCeE
Q 002016 29 GLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-ENVIASLDL-RHGEIFWRHVLGINDVVD--------GIDIALGKYV 98 (981)
Q Consensus 29 G~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~-~g~L~ALd~-~tG~ivWR~~l~~~~~i~--------~l~~~~~~~v 98 (981)
++..|++.+ |... .....|...+++||+++. ++.|+|||+ +||+++|++.+....... .-.++..++.
T Consensus 40 l~~~W~~~~-~~~~-g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (571)
T 2ad6_A 40 VKAAWSFST-GVLN-GHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQ 117 (571)
T ss_dssp CEEEEEEEC-SCCS-CCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTE
T ss_pred ccEEEEEEC-CCCC-CcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCE
Confidence 578999987 3211 112356667999999999 899999999 999999999887542110 0113456677
Q ss_pred EEEEccCCEEEEEeCCCCcEeEEEeccCccc---cCCceeecccccccCCcEEEEE-e------CCEEEEEECCCCcEeE
Q 002016 99 ITLSSDGSTLRAWNLPDGQMVWESFLRGSKH---SKPLLLVPTNLKVDKDSLILVS-S------KGCLHAVSSIDGEILW 168 (981)
Q Consensus 99 V~Vs~~g~~V~A~da~tG~llWe~~~~~~~~---s~~~~~v~~~~~~~~~~~V~V~-~------~g~l~aLd~~tG~~~W 168 (981)
|++++.++.|+|+|+.||+++|+..+..... ....+++ .++.|++. . +|.|+|||++||+++|
T Consensus 118 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-------~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 118 IVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-------AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-------ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-------ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 7777767799999999999999998765211 0122222 25677775 3 6899999999999999
Q ss_pred EEeccCccee----e--------------------------------eEEEEeecCCeEEEEEec----------CC--c
Q 002016 169 TRDFAAESVE----V--------------------------------QQVIQLDESDQIYVVGYA----------GS--S 200 (981)
Q Consensus 169 ~~~~~~~~~~----~--------------------------------~~vv~s~~~~~Vyvvg~~----------g~--~ 200 (981)
++....+..+ + ..+..-...+.||+.... ++ +
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 9987533200 0 001111235778875421 11 0
Q ss_pred eeEEEEEECCCCceeeeeeeecc--C--CccCceEEEc---Cc----EEEEEECCCCeEEEEEeecCeeeEEEEee
Q 002016 201 QFHAYQINAMNGELLNHETAAFS--G--GFVGDVALVS---SD----TLVTLDTTRSILVTVSFKNRKIAFQETHL 265 (981)
Q Consensus 201 ~~~v~aLd~~tG~~lw~~~v~~p--~--~~~~~~~~vg---~~----~lv~~d~~~g~L~v~~L~sg~~~~~~~~l 265 (981)
...++|||+.||+.+|+++.... + +....+++++ ++ .+++.+ .+|.++++|..+|++ +-++++
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~-~w~~~~ 344 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID-RNGILYTLNRENGNL-IVAEKV 344 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC-TTSEEEEEETTTCCE-EEEEES
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC-CCcEEEEEECCCCCE-Eeeecc
Confidence 12599999999999999975421 1 1112333333 22 344454 578999999999984 333443
No 5
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.55 E-value=1.6e-13 Score=165.51 Aligned_cols=221 Identities=17% Similarity=0.145 Sum_probs=144.5
Q ss_pred cccEeEEEeccCceeeeeeeecccCCCEEEEEcC-CCEEEEEEC-CCCccceEEEcCCCccee--------eeeeee--c
Q 002016 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-ENVIASLDL-RHGEIFWRHVLGINDVVD--------GIDIAL--G 95 (981)
Q Consensus 28 vG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~-~g~L~ALd~-~tG~ivWR~~l~~~~~i~--------~l~~~~--~ 95 (981)
.++..|++++ |... ....+|...+++||+++. +|.|+|||+ +||+++|++.+....... .-.++. .
T Consensus 39 ~l~~~W~~~~-g~~~-g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~ 116 (599)
T 1w6s_A 39 QLRPAWTFST-GLLN-GHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPG 116 (599)
T ss_dssp GEEEEEEEEC-SCCS-CCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECC
T ss_pred CCcEEEEEEC-CCCC-CceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEec
Confidence 4678999987 3211 112356667999999999 899999999 999999999886542100 001234 4
Q ss_pred CeE----EEEEccCCEEEEEeCCCCcEeEEEeccCccc---cCCceeecccccccCCcEEEEEe-------CCEEEEEEC
Q 002016 96 KYV----ITLSSDGSTLRAWNLPDGQMVWESFLRGSKH---SKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSS 161 (981)
Q Consensus 96 ~~v----V~Vs~~g~~V~A~da~tG~llWe~~~~~~~~---s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~ 161 (981)
++. |++++.++.|+|+|+.||+++|+........ ..+.+++ .++.|++.. +|.|+|+|+
T Consensus 117 ~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-------~~g~V~vg~~g~e~g~~g~v~A~D~ 189 (599)
T 1w6s_A 117 DGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-------VKDKVIIGSSGAELGVRGYLTAYDV 189 (599)
T ss_dssp CSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-------ETTEEEECCBCGGGTCCCEEEEEET
T ss_pred CCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-------ECCEEEEEecccccCCCCeEEEEEC
Confidence 555 7777667799999999999999998765210 0122222 256777753 689999999
Q ss_pred CCCcEeEEEeccCccee----e--------------------------------eEEEEeecCCeEEEEEecCC------
Q 002016 162 IDGEILWTRDFAAESVE----V--------------------------------QQVIQLDESDQIYVVGYAGS------ 199 (981)
Q Consensus 162 ~tG~~~W~~~~~~~~~~----~--------------------------------~~vv~s~~~~~Vyvvg~~g~------ 199 (981)
+||+++|++....+..+ + .....-...+.||+....+.
T Consensus 190 ~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~ 269 (599)
T 1w6s_A 190 KTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETM 269 (599)
T ss_dssp TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGG
T ss_pred CCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcc
Confidence 99999999987643210 0 00111135677887543220
Q ss_pred ------ceeEEEEEECCCCceeeeeeeecc--CC--ccCceEEEc-----C---cEEEEEECCCCeEEEEEeecCee
Q 002016 200 ------SQFHAYQINAMNGELLNHETAAFS--GG--FVGDVALVS-----S---DTLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 200 ------~~~~v~aLd~~tG~~lw~~~v~~p--~~--~~~~~~~vg-----~---~~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
+.-.++|||+.||+.+|+++.... ++ ....++++. + ..++..+ .+|.++++|..+|+.
T Consensus 270 r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 270 RPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPD-RNGIVYTLDRTDGAL 345 (599)
T ss_dssp SCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEEC-TTSEEEEEETTTCCE
T ss_pred cCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEEC-CCcEEEEEECCCCCE
Confidence 012599999999999999975432 11 111233332 2 2444454 578999999999984
No 6
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.54 E-value=2.7e-13 Score=166.12 Aligned_cols=221 Identities=16% Similarity=0.156 Sum_probs=145.4
Q ss_pred cccEeEEEeccCceeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcce--------eeeeeeecCeEE
Q 002016 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV--------DGIDIALGKYVI 99 (981)
Q Consensus 28 vG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i--------~~l~~~~~~~vV 99 (981)
.++..|++++ |... .....|...+++||+++.+|.|+|||++||+++|++.+...... ..-.++..++.|
T Consensus 54 ~~~~~W~~~~-~~~~-g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v 131 (677)
T 1kb0_A 54 DLGLAWSYNL-ESTR-GVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKV 131 (677)
T ss_dssp GEEEEEEEEC-CCCS-CCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEE
T ss_pred CccEEEEEEC-CCCC-CceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEE
Confidence 4678999987 3221 12234666799999999999999999999999999988654210 001124566777
Q ss_pred EEEccCCEEEEEeCCCCcEeEEEecc-Ccc---ccCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeE
Q 002016 100 TLSSDGSTLRAWNLPDGQMVWESFLR-GSK---HSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILW 168 (981)
Q Consensus 100 ~Vs~~g~~V~A~da~tG~llWe~~~~-~~~---~s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W 168 (981)
++++.++.|+|||+.||+++|+.... ... .....+++ .++.|++.. +|.|+++|++||+++|
T Consensus 132 ~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-------~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 132 YVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-------FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-------ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-------ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 77776789999999999999999976 211 00122222 256777753 5899999999999999
Q ss_pred EEeccCcce--------------------------e----eeEEEEeecCCeEEEEEecC------------Cc---eeE
Q 002016 169 TRDFAAESV--------------------------E----VQQVIQLDESDQIYVVGYAG------------SS---QFH 203 (981)
Q Consensus 169 ~~~~~~~~~--------------------------~----~~~vv~s~~~~~Vyvvg~~g------------~~---~~~ 203 (981)
++....+.. . ...+......+.||+....+ +. ...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 998743220 0 00111123567888754332 00 024
Q ss_pred EEEEECCCCceeeeeeeecc--C--CccCceEEEc----C---cEEEEEECCCCeEEEEEeecCee
Q 002016 204 AYQINAMNGELLNHETAAFS--G--GFVGDVALVS----S---DTLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 204 v~aLd~~tG~~lw~~~v~~p--~--~~~~~~~~vg----~---~~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
|+|||+.||+.+|+++.... + .....+++++ + +.++..+ .+|.++++|..+|++
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~-~~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP-KNGFFFVLDRTNGKF 349 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC-CCCEEEEEECCCCCE
Confidence 99999999999999875322 1 1112233332 2 3455554 578999999999984
No 7
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.53 E-value=2.7e-13 Score=166.39 Aligned_cols=221 Identities=15% Similarity=0.156 Sum_probs=141.5
Q ss_pred cccEeEEEeccCceeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcce--------eeeeeeecCeEE
Q 002016 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV--------DGIDIALGKYVI 99 (981)
Q Consensus 28 vG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i--------~~l~~~~~~~vV 99 (981)
.++..|++++ |... .....|...+++||+++.++.|+|||++||+++|++.+...... ....++..++.|
T Consensus 47 ~l~~~W~~~~-~~~~-~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v 124 (689)
T 1yiq_A 47 QLGLAWSYKL-DLDR-GVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKV 124 (689)
T ss_dssp GEEEEEEEEC-SSCS-CCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEE
T ss_pred CceEEEEEEC-CCCC-CceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEE
Confidence 3568999987 3221 11234666799999999999999999999999999987654211 001124566777
Q ss_pred EEEccCCEEEEEeCCCCcEeEEEecc-Cccc---cCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeE
Q 002016 100 TLSSDGSTLRAWNLPDGQMVWESFLR-GSKH---SKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILW 168 (981)
Q Consensus 100 ~Vs~~g~~V~A~da~tG~llWe~~~~-~~~~---s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W 168 (981)
++++.++.|+|||++||+++|+.... .... ....+++ .++.|++.. +|.|+|+|++||+++|
T Consensus 125 ~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-------~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 125 YVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-------VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-------ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-------ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 77776789999999999999999875 2111 0112222 256677752 5899999999999999
Q ss_pred EEeccC--cce-----------------------e---e-eEEEEeecCCeEEEEEecCC------------c---eeEE
Q 002016 169 TRDFAA--ESV-----------------------E---V-QQVIQLDESDQIYVVGYAGS------------S---QFHA 204 (981)
Q Consensus 169 ~~~~~~--~~~-----------------------~---~-~~vv~s~~~~~Vyvvg~~g~------------~---~~~v 204 (981)
++.... +.. . . ..+......+.||+....+. . ...+
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 997421 100 0 0 01111124677776433221 0 0149
Q ss_pred EEEECCCCceeeeeeeecc--CC--ccCceEEE----cCc---EEEEEECCCCeEEEEEeecCee
Q 002016 205 YQINAMNGELLNHETAAFS--GG--FVGDVALV----SSD---TLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p--~~--~~~~~~~v----g~~---~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
+|+|+.||+.+|+++.... ++ ....+++. .+. .++..+ .+|.++++|..+|++
T Consensus 278 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP-KNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCE
T ss_pred EEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC-CCCeEEEEECCCCCE
Confidence 9999999999999865321 11 22223332 121 444444 578999999999884
No 8
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.51 E-value=4.1e-13 Score=164.28 Aligned_cols=220 Identities=15% Similarity=0.166 Sum_probs=141.3
Q ss_pred cccEeEEEeccCceeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcce---------eeeeeeecCeE
Q 002016 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV---------DGIDIALGKYV 98 (981)
Q Consensus 28 vG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i---------~~l~~~~~~~v 98 (981)
.++..|++++-+. . .....|...+++||+++.+|.|+|||++||+++|++.+..+... ... ++..++.
T Consensus 43 ~l~~~W~~~~~~~-~-~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 119 (668)
T 1kv9_A 43 SLGLAWYMDLDNT-R-GLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDK 119 (668)
T ss_dssp GEEEEEEEECSCC-S-CCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTE
T ss_pred CcceEEEEECCCC-C-CcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCE
Confidence 4668999987322 1 11234666799999999999999999999999999987654210 111 2345667
Q ss_pred EEEEccCCEEEEEeCCCCcEeEEEeccCccc---cCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeE
Q 002016 99 ITLSSDGSTLRAWNLPDGQMVWESFLRGSKH---SKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILW 168 (981)
Q Consensus 99 V~Vs~~g~~V~A~da~tG~llWe~~~~~~~~---s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W 168 (981)
|++++.++.|+|||+.||+++|+........ ....+++ .++.|++.. +|.|++||++||+++|
T Consensus 120 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-------~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 120 VYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-------VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-------ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-------ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 7777767799999999999999998853211 0112222 256777752 4899999999999999
Q ss_pred EEeccC--ccee-----------------------e----eEEEEeecCCeEEEEEecCC------------c---eeEE
Q 002016 169 TRDFAA--ESVE-----------------------V----QQVIQLDESDQIYVVGYAGS------------S---QFHA 204 (981)
Q Consensus 169 ~~~~~~--~~~~-----------------------~----~~vv~s~~~~~Vyvvg~~g~------------~---~~~v 204 (981)
++.... +... - ..+......+.||+....+. . ...|
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 997531 1100 0 00111124577876543221 0 1149
Q ss_pred EEEECCCCceeeeeeeecc--CC--ccCceEEE----cCc---EEEEEECCCCeEEEEEeecCee
Q 002016 205 YQINAMNGELLNHETAAFS--GG--FVGDVALV----SSD---TLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p--~~--~~~~~~~v----g~~---~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
+|||+.||+.+|+++.... ++ ....+++. .+. .++..+ .+|.++++|..+|++
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAP-KNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCE
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEEC-CCCEEEEEECCCCCE
Confidence 9999999999999975421 11 11222221 221 344444 578899999988884
No 9
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.47 E-value=6.4e-14 Score=158.96 Aligned_cols=187 Identities=12% Similarity=0.051 Sum_probs=100.6
Q ss_pred ecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 48 TQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 48 ~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
.|..+++.||+++.+|.|+|+|++||+++|+... .+ +...+...++.++++++.++.|++||++||+.+|+++...+
T Consensus 4 sP~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~--~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DP--VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp ----CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CC--SCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred CCeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CC--ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 4667789999999999999999999999999988 32 22232223333555555667999999999999999876533
Q ss_pred cccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEE
Q 002016 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
......+.+ ..++.|++. .+|.|+++|++||+++|++...... .. +..++.+|+.+..| .+++
T Consensus 81 ~~~~~sp~~------~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~----~~--~p~~~~v~~~~~dg----~v~a 144 (369)
T 2hz6_A 81 ELVQASPCR------SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFAD----SL--SPSTSLLYLGRTEY----TITM 144 (369)
T ss_dssp HHHTTCSCC-----------CCCCEEEEEEEEECCC----------------------------EEEEEEEE----EEEC
T ss_pred cccccCceE------ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcc----cc--cccCCEEEEEecCC----EEEE
Confidence 210111111 124556664 5899999999999999998765321 11 12567788765544 6999
Q ss_pred EECCCCceeeeeeeeccCCccCceEEEc----CcEEEEEECCCCeEEEEEeecCee
Q 002016 207 INAMNGELLNHETAAFSGGFVGDVALVS----SDTLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 207 Ld~~tG~~lw~~~v~~p~~~~~~~~~vg----~~~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
+|+.||+.+|+........ ..+.+ ++.+++.+ .+|.+++.+..+|++
T Consensus 145 ~d~~tG~~~W~~~~~~~~~----~~~~~~~~~~~~v~~~~-~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 145 YDTKTRELRWNATYFDYAA----SLPEDDVDYKMSHFVSN-GDGLVVTVDSESGDV 195 (369)
T ss_dssp CCSSSSSCCCEEEEEEECC----BCCCCCTTCCCCEEEEE-TSCEEEEECTTTCCE
T ss_pred EECCCCCEEEeEecccccC----ccccCCccccceEEEEC-CCCEEEEEECCCCcE
Confidence 9999999999986543211 11111 12223333 357788888877773
No 10
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.42 E-value=2.8e-11 Score=145.73 Aligned_cols=193 Identities=14% Similarity=0.172 Sum_probs=117.5
Q ss_pred cccccccEeEEEeccCceeee-----eeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeeec
Q 002016 24 YEDQVGLMDWHQQYIGKVKHA-----VFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALG 95 (981)
Q Consensus 24 yedqvG~~dW~~~~vG~~~~~-----~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~~ 95 (981)
++.+.|+..|++..-...... .-..+...+++||+++.++.|+|||++||+++|++.+.... .+.+. +.+.
T Consensus 83 lD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~s-P~v~ 161 (582)
T 1flg_A 83 LDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGA-PTIV 161 (582)
T ss_dssp EESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSC-CEEE
T ss_pred EECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccC-CEEe
Confidence 345689999999874332110 01234556899999999999999999999999999986531 12222 2233
Q ss_pred Ce------EEEEEcc------CCEEEEEeCCCCcEeEEEeccCcccc------------CCcee-------------ecc
Q 002016 96 KY------VITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHS------------KPLLL-------------VPT 138 (981)
Q Consensus 96 ~~------vV~Vs~~------g~~V~A~da~tG~llWe~~~~~~~~s------------~~~~~-------------v~~ 138 (981)
++ .|+++.. ++.|+|+|++||+++|+......... ..... ...
T Consensus 162 ~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~ 241 (582)
T 1flg_A 162 KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWS 241 (582)
T ss_dssp ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGG
T ss_pred CCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccc
Confidence 33 7777542 46999999999999998875321000 00000 000
Q ss_pred -------cccc--cCCcEEEEEe---------------------C----CEEEEEECCCCcEeEEEeccCcc-------e
Q 002016 139 -------NLKV--DKDSLILVSS---------------------K----GCLHAVSSIDGEILWTRDFAAES-------V 177 (981)
Q Consensus 139 -------~~~~--~~~~~V~V~~---------------------~----g~l~aLd~~tG~~~W~~~~~~~~-------~ 177 (981)
..++ ...+.||+.. + +.|+|||++||+++|+++..... .
T Consensus 242 ~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~ 321 (582)
T 1flg_A 242 HGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNN 321 (582)
T ss_dssp GCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCC
T ss_pred cCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCC
Confidence 0000 1346777753 1 58999999999999999764221 1
Q ss_pred eeeEEEEee-cCC---eEEEEEecCCceeEEEEEECCCCceeeeeeee
Q 002016 178 EVQQVIQLD-ESD---QIYVVGYAGSSQFHAYQINAMNGELLNHETAA 221 (981)
Q Consensus 178 ~~~~vv~s~-~~~---~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~ 221 (981)
.+ -+.... .++ .+++.+-. ++.+++||+.||+++|+....
T Consensus 322 ~p-~l~~~~~~~G~~~~~v~~~~~---~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 322 EL-VLFDYKAKDGKIVKATAHADR---NGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp CC-EEEEEECSSSCEEEEEEEECT---TSEEEEEETTTCCEEEEEESS
T ss_pred Cc-EEEeeecCCCCEEEEEEEECC---CceEEEEECCCCCEecccccc
Confidence 11 111111 123 23332322 236999999999999987653
No 11
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.42 E-value=2.3e-11 Score=149.07 Aligned_cols=190 Identities=13% Similarity=0.191 Sum_probs=115.0
Q ss_pred ccccccEeEEEeccCceee-------eeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcC-CC---cceeeeeee
Q 002016 25 EDQVGLMDWHQQYIGKVKH-------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLG-IN---DVVDGIDIA 93 (981)
Q Consensus 25 edqvG~~dW~~~~vG~~~~-------~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~-~~---~~i~~l~~~ 93 (981)
+.+.|+..|+++.-..... .....+...+++||+++.+|.|+|||++||+++|++.+. .. ..+... +.
T Consensus 93 D~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~-p~ 171 (677)
T 1kb0_A 93 DTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGA-PR 171 (677)
T ss_dssp ETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSC-CE
T ss_pred ECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccC-cE
Confidence 4568999999987432211 011234556899999999999999999999999999986 21 112222 33
Q ss_pred ecCeEEEEEcc------CCEEEEEeCCCCcEeEEEeccCccccCCc-----------------eee---cc---cccc--
Q 002016 94 LGKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHSKPL-----------------LLV---PT---NLKV-- 142 (981)
Q Consensus 94 ~~~~vV~Vs~~------g~~V~A~da~tG~llWe~~~~~~~~s~~~-----------------~~v---~~---~~~~-- 142 (981)
..++.|++++. ++.|+|||+.||+++|++....+..+... ... +. ....
T Consensus 172 v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d 251 (677)
T 1kb0_A 172 VFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFD 251 (677)
T ss_dssp EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEE
T ss_pred EECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEc
Confidence 45567776543 47999999999999999987543310000 000 00 0000
Q ss_pred cCCcEEEEEe-CC-------------------EEEEEECCCCcEeEEEeccCcc-------eeeeEEEEeecCC---eEE
Q 002016 143 DKDSLILVSS-KG-------------------CLHAVSSIDGEILWTRDFAAES-------VEVQQVIQLDESD---QIY 192 (981)
Q Consensus 143 ~~~~~V~V~~-~g-------------------~l~aLd~~tG~~~W~~~~~~~~-------~~~~~vv~s~~~~---~Vy 192 (981)
..++.|++.. ++ .|+|||++||+++|+++..... ..+ .+.+...++ .++
T Consensus 252 ~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p-~l~~~~~dG~~~~~l 330 (677)
T 1kb0_A 252 AELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPM-ILADIKIAGKPRKVI 330 (677)
T ss_dssp TTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCC-EEEEEEETTEEEEEE
T ss_pred CCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCc-EEEecccCCcEeeEE
Confidence 1245677753 32 5999999999999998764221 001 111111122 222
Q ss_pred EEEecCCceeEEEEEECCCCceeeeee
Q 002016 193 VVGYAGSSQFHAYQINAMNGELLNHET 219 (981)
Q Consensus 193 vvg~~g~~~~~v~aLd~~tG~~lw~~~ 219 (981)
+.+- .++.+++||..||+++|+..
T Consensus 331 ~~~~---~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 331 LHAP---KNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EECC---TTSEEEEEETTTCCEEEEEE
T ss_pred EEEC---CCCEEEEEECCCCCEecccc
Confidence 2221 12357888888888887765
No 12
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=4.3e-11 Score=146.36 Aligned_cols=188 Identities=15% Similarity=0.232 Sum_probs=113.2
Q ss_pred ccccccEeEEEeccCceee-------eeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeee
Q 002016 25 EDQVGLMDWHQQYIGKVKH-------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIAL 94 (981)
Q Consensus 25 edqvG~~dW~~~~vG~~~~-------~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~ 94 (981)
+.+.|+..|++..-..... .....|...+++||+++.+|.|+|||++||+++|++.+.... .+.+. +..
T Consensus 82 D~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~-P~v 160 (668)
T 1kv9_A 82 DAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGA-PRV 160 (668)
T ss_dssp ETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSC-CEE
T ss_pred ECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCC-CEE
Confidence 4568999999976322110 011234556889999999999999999999999999885321 12222 334
Q ss_pred cCeEEEEEcc------CCEEEEEeCCCCcEeEEEeccCc--cccC-Cceee---c-----------c-----cccc-c-C
Q 002016 95 GKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGS--KHSK-PLLLV---P-----------T-----NLKV-D-K 144 (981)
Q Consensus 95 ~~~vV~Vs~~------g~~V~A~da~tG~llWe~~~~~~--~~s~-~~~~v---~-----------~-----~~~~-~-~ 144 (981)
.++.|+++.. ++.|+|||+.||+++|++..... .... ...+. + . ...+ + .
T Consensus 161 ~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~ 240 (668)
T 1kv9_A 161 VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE 240 (668)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETT
T ss_pred ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCC
Confidence 5567777543 36999999999999999986321 1000 00000 0 0 0000 1 2
Q ss_pred CcEEEEE-eCC-------------------EEEEEECCCCcEeEEEeccCcce------eeeEEEEeecCCe----EEEE
Q 002016 145 DSLILVS-SKG-------------------CLHAVSSIDGEILWTRDFAAESV------EVQQVIQLDESDQ----IYVV 194 (981)
Q Consensus 145 ~~~V~V~-~~g-------------------~l~aLd~~tG~~~W~~~~~~~~~------~~~~vv~s~~~~~----Vyvv 194 (981)
.+.|++. .++ .|+|||++||+++|+++...... .+..+.+...++. +++.
T Consensus 241 ~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~ 320 (668)
T 1kv9_A 241 LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQA 320 (668)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEE
Confidence 4577775 344 49999999999999998642110 1111111112332 3332
Q ss_pred EecCCceeEEEEEECCCCceeee
Q 002016 195 GYAGSSQFHAYQINAMNGELLNH 217 (981)
Q Consensus 195 g~~g~~~~~v~aLd~~tG~~lw~ 217 (981)
+. ++.+++||..||+++|.
T Consensus 321 ~~----~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 321 PK----NGFFYVLDRTNGKLISA 339 (668)
T ss_dssp CT----TSEEEEEETTTCCEEEE
T ss_pred CC----CCEEEEEECCCCCEecc
Confidence 22 23588888888888843
No 13
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.40 E-value=1.2e-11 Score=148.53 Aligned_cols=189 Identities=15% Similarity=0.200 Sum_probs=120.4
Q ss_pred ccccEeEEEeccCcee-e------eeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeeecC
Q 002016 27 QVGLMDWHQQYIGKVK-H------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALGK 96 (981)
Q Consensus 27 qvG~~dW~~~~vG~~~-~------~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~~~ 96 (981)
+.|+..|++++-.... . ..-..|...+++||+++.++.|+|||++||+++|++.+.... .+... +...+
T Consensus 82 ~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~-P~v~~ 160 (571)
T 2ad6_A 82 DPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQA-PFVAK 160 (571)
T ss_dssp CTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSC-CEEET
T ss_pred CCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccC-CEEEC
Confidence 6899999998743211 0 011235567899999999999999999999999999986521 12222 23445
Q ss_pred eEEEEEcc------CCEEEEEeCCCCcEeEEEeccCccc---cCC-----ceee----------------cc-----ccc
Q 002016 97 YVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKH---SKP-----LLLV----------------PT-----NLK 141 (981)
Q Consensus 97 ~vV~Vs~~------g~~V~A~da~tG~llWe~~~~~~~~---s~~-----~~~v----------------~~-----~~~ 141 (981)
+.|+++.. ++.|+|+|++||+++|++....+.. ..+ .++. .. ...
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 67777654 4799999999999999998764320 000 0000 00 000
Q ss_pred c--cCCcEEEEEe-C----------------CEEEEEECCCCcEeEEEeccCcc-------eeeeEEEEeecCC---eEE
Q 002016 142 V--DKDSLILVSS-K----------------GCLHAVSSIDGEILWTRDFAAES-------VEVQQVIQLDESD---QIY 192 (981)
Q Consensus 142 ~--~~~~~V~V~~-~----------------g~l~aLd~~tG~~~W~~~~~~~~-------~~~~~vv~s~~~~---~Vy 192 (981)
+ ...+.|++.. + +.|+|||++||+++|+++..... ..+. +.....++ .++
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLL 319 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEE
Confidence 0 1245677753 2 36999999999999999865211 1111 11111234 244
Q ss_pred EEEecCCceeEEEEEECCCCceeeeeee
Q 002016 193 VVGYAGSSQFHAYQINAMNGELLNHETA 220 (981)
Q Consensus 193 vvg~~g~~~~~v~aLd~~tG~~lw~~~v 220 (981)
+.+... ..+++||+.||+++|+..+
T Consensus 320 ~~~~~~---G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 320 SHIDRN---GILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp EEECTT---SEEEEEETTTCCEEEEEES
T ss_pred EEeCCC---cEEEEEECCCCCEEeeecc
Confidence 333322 3699999999999999854
No 14
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.39 E-value=1e-11 Score=149.81 Aligned_cols=190 Identities=13% Similarity=0.188 Sum_probs=120.6
Q ss_pred ccccEeEEEeccCceee-------eeeeeccc--CCCE----EEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeee
Q 002016 27 QVGLMDWHQQYIGKVKH-------AVFHTQKT--GRKR----VVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGI 90 (981)
Q Consensus 27 qvG~~dW~~~~vG~~~~-------~~f~~~~~--~~~~----VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l 90 (981)
+.|+..|+++.-..... ..-..+.. .+++ ||+++.++.|+|||++||+++|++.+.... .+.+.
T Consensus 82 ~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ss 161 (599)
T 1w6s_A 82 DPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIA 161 (599)
T ss_dssp CTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSC
T ss_pred CCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecC
Confidence 68999999987432210 00112444 4666 999999999999999999999999886521 12222
Q ss_pred eeeecCeEEEEEcc------CCEEEEEeCCCCcEeEEEeccCccccC-------------------------Cceeecc-
Q 002016 91 DIALGKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHSK-------------------------PLLLVPT- 138 (981)
Q Consensus 91 ~~~~~~~vV~Vs~~------g~~V~A~da~tG~llWe~~~~~~~~s~-------------------------~~~~v~~- 138 (981)
+.+.++.|++++. ++.|+|+|++||+++|++....+.... +....+.
T Consensus 162 -P~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~ 240 (599)
T 1w6s_A 162 -PYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGG 240 (599)
T ss_dssp -CEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCC
T ss_pred -CEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCC
Confidence 3344567777652 479999999999999999976543100 0000000
Q ss_pred ----c-ccccCCcEEEEEe-C----------------CEEEEEECCCCcEeEEEeccCcce----eee--EEEEee-cCC
Q 002016 139 ----N-LKVDKDSLILVSS-K----------------GCLHAVSSIDGEILWTRDFAAESV----EVQ--QVIQLD-ESD 189 (981)
Q Consensus 139 ----~-~~~~~~~~V~V~~-~----------------g~l~aLd~~tG~~~W~~~~~~~~~----~~~--~vv~s~-~~~ 189 (981)
. ......+.||+.. + +.|+|||++||+++|+++...... ... .+.+.. .++
T Consensus 241 ~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G 320 (599)
T 1w6s_A 241 TNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDG 320 (599)
T ss_dssp CCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTS
T ss_pred ccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCC
Confidence 0 0001356777753 3 389999999999999998764311 000 111111 234
Q ss_pred ---eEEEEEecCCceeEEEEEECCCCceeeeeee
Q 002016 190 ---QIYVVGYAGSSQFHAYQINAMNGELLNHETA 220 (981)
Q Consensus 190 ---~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v 220 (981)
.+++.+... +.+++||..||+++|+...
T Consensus 321 ~~~~~v~~~~~~---G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 321 KARKLLTHPDRN---GIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp CEEEEEEEECTT---SEEEEEETTTCCEEEEEES
T ss_pred cEEEEEEEECCC---cEEEEEECCCCCEeecccc
Confidence 344433222 3699999999999999854
No 15
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=1.8e-11 Score=133.25 Aligned_cols=183 Identities=8% Similarity=0.099 Sum_probs=119.3
Q ss_pred ccccccccccEeEEEeccC--ceeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeE
Q 002016 21 LSLYEDQVGLMDWHQQYIG--KVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYV 98 (981)
Q Consensus 21 ~AlyedqvG~~dW~~~~vG--~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~v 98 (981)
..+++.+.|++.|+...-+ .+....+. .++.+++ +..+.|.++|+ +|+++|+........+.......++.+
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~~~~~~~~~----pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~ 90 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGWECNSVAAT----KAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNA 90 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEEEC----TTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCE
T ss_pred EEEEECCCCeEEEEeCCCccCCCcCeEEC----CCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCE
Confidence 3566777999999998733 12222222 2567777 66788999999 999999998854322333322334555
Q ss_pred EEEEcc-CCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcc
Q 002016 99 ITLSSD-GSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAES 176 (981)
Q Consensus 99 V~Vs~~-g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~ 176 (981)
++.... .+++.++|+ +|+++|++.+.............. .....++.+++. .+++|+++|++ |+.+|++..+...
T Consensus 91 lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v-~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~ 167 (276)
T 3no2_A 91 LVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQI-NKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTP 167 (276)
T ss_dssp EEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCC-EECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCC
T ss_pred EEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCc-eECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCc
Confidence 554443 568999997 999999998764321000000000 011224444444 48999999998 9999999876432
Q ss_pred eeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeee
Q 002016 177 VEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHET 219 (981)
Q Consensus 177 ~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~ 219 (981)
. .+. ...++.+++.+..++ +++++|+.||+.+|+..
T Consensus 168 ~---~~~-~~~~g~~~v~~~~~~---~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 168 F---SSA-FLDNGDCLVACGDAH---CFVQLNLESNRIVRRVN 203 (276)
T ss_dssp C---EEE-ECTTSCEEEECBTTS---EEEEECTTTCCEEEEEE
T ss_pred c---cee-EcCCCCEEEEeCCCC---eEEEEeCcCCcEEEEec
Confidence 2 222 235667777666553 69999999999999995
No 16
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.34 E-value=6.7e-12 Score=140.60 Aligned_cols=162 Identities=12% Similarity=0.067 Sum_probs=103.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeee--e-eecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGID--I-ALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~--~-~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
++.||++|.+|.|+|||++||+++|+...+........+ . ..+++++++. ..+|.|+|+|+.+|..+|...+....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 568999999999999999999999999876100011110 0 1234566654 35679999999999999988876443
Q ss_pred ccCCceeeccccccc-------CCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcce----eeeEEEE---e---ecCCe
Q 002016 129 HSKPLLLVPTNLKVD-------KDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV----EVQQVIQ---L---DESDQ 190 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~-------~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~----~~~~vv~---s---~~~~~ 190 (981)
. ..++.....+.. .++.||+. .+|+++|+|+.||+++|++....+.. ....|.. . ..++.
T Consensus 90 ~--~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 90 S--TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp T--TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred e--ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 2 112221112222 47788886 69999999999999999998764321 0111111 0 13466
Q ss_pred EEEEEecCCceeEEEEEECCCCceeeeeeeec
Q 002016 191 IYVVGYAGSSQFHAYQINAMNGELLNHETAAF 222 (981)
Q Consensus 191 Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~ 222 (981)
||+..... .+++.+ ++|+ +|....+.
T Consensus 168 v~ig~~~y----~v~~~~-~sG~-~W~~~~s~ 193 (339)
T 2be1_A 168 IVIGKTIF----ELGIHS-YDGA-SYNVTYST 193 (339)
T ss_dssp EEEEEEEE----ECEECC-TTSC-CCCCEEEE
T ss_pred EEEecceE----EEEEEC-CCCC-eEEEeccc
Confidence 77644332 466667 7898 89987644
No 17
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.34 E-value=1.2e-10 Score=126.77 Aligned_cols=193 Identities=17% Similarity=0.208 Sum_probs=118.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~ 132 (981)
++.+++++.++.|+++|++||+++|+...+............++.+++ +. ++.|++||+ +|+++|++.........+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~-~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY-SKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-EC-BSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eC-CCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 556888889999999999999999999886521122221222444444 55 458999999 999999999752111011
Q ss_pred ceeecccccccCCcEEEEE-e-CCEEEEEECCCCcEeEEEeccCcc----eeeeEEEEeecCCeEEEEEecCCceeEEEE
Q 002016 133 LLLVPTNLKVDKDSLILVS-S-KGCLHAVSSIDGEILWTRDFAAES----VEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 133 ~~~v~~~~~~~~~~~V~V~-~-~g~l~aLd~~tG~~~W~~~~~~~~----~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
.... ..++.+++. . +++++++|. +|+.+|++...... ..+..+. ...++.+++.....+ +|.+
T Consensus 82 ~~~~------~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~-~~~~G~~lv~~~~~~---~v~~ 150 (276)
T 3no2_A 82 ARIL------PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN-KNKKGNYLVPLFATS---EVRE 150 (276)
T ss_dssp EEEC------TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE-ECTTSCEEEEETTTT---EEEE
T ss_pred cEEC------CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce-ECCCCCEEEEecCCC---EEEE
Confidence 1111 223444443 3 689999996 99999999764321 0111121 134555555444333 6999
Q ss_pred EECCCCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCeeeEEEEe
Q 002016 207 INAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRKIAFQETH 264 (981)
Q Consensus 207 Ld~~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~~~~~~~~ 264 (981)
+|++ |+.+|++.... ...+.+.+..+++++ .+..++.+.+++..+|++ +-++.
T Consensus 151 ~d~~-G~~~w~~~~~~--~~~~~~~~~~g~~~v-~~~~~~~v~~~d~~tG~~-~w~~~ 203 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSG--TPFSSAFLDNGDCLV-ACGDAHCFVQLNLESNRI-VRRVN 203 (276)
T ss_dssp ECTT-SCEEEEEECSS--CCCEEEECTTSCEEE-ECBTTSEEEEECTTTCCE-EEEEE
T ss_pred ECCC-CCEEEEEECCC--CccceeEcCCCCEEE-EeCCCCeEEEEeCcCCcE-EEEec
Confidence 9998 99999996531 122222222334444 344556788888888874 34343
No 18
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.33 E-value=4.3e-11 Score=146.92 Aligned_cols=191 Identities=15% Similarity=0.217 Sum_probs=117.4
Q ss_pred ccccccEeEEEeccCceee-------eeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcC-CCc---ceeeeeee
Q 002016 25 EDQVGLMDWHQQYIGKVKH-------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLG-IND---VVDGIDIA 93 (981)
Q Consensus 25 edqvG~~dW~~~~vG~~~~-------~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~-~~~---~i~~l~~~ 93 (981)
+.+.|+..|++..-..... .....|...+++||+++.+|.|+|||++||+++|++... ... .+.+. +.
T Consensus 86 D~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~s-P~ 164 (689)
T 1yiq_A 86 DARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGA-PR 164 (689)
T ss_dssp ETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSC-CE
T ss_pred ECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCC-cE
Confidence 4568999999976322110 011234556899999999999999999999999999885 221 12222 23
Q ss_pred ecCeEEEEEcc------CCEEEEEeCCCCcEeEEEeccCc--ccc-CCcee----------------ec---cccc-c-c
Q 002016 94 LGKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGS--KHS-KPLLL----------------VP---TNLK-V-D 143 (981)
Q Consensus 94 ~~~~vV~Vs~~------g~~V~A~da~tG~llWe~~~~~~--~~s-~~~~~----------------v~---~~~~-~-~ 143 (981)
..++.|+++.. ++.|+|||+.||+++|++..... ... ....+ -+ .... . .
T Consensus 165 v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~ 244 (689)
T 1yiq_A 165 VVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP 244 (689)
T ss_dssp EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET
T ss_pred EECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC
Confidence 44566666542 36899999999999999985311 000 00000 00 0000 0 1
Q ss_pred CCcEEEEE-eCC-------------------EEEEEECCCCcEeEEEeccCcc-----e-eeeEEEEeecCCe----EEE
Q 002016 144 KDSLILVS-SKG-------------------CLHAVSSIDGEILWTRDFAAES-----V-EVQQVIQLDESDQ----IYV 193 (981)
Q Consensus 144 ~~~~V~V~-~~g-------------------~l~aLd~~tG~~~W~~~~~~~~-----~-~~~~vv~s~~~~~----Vyv 193 (981)
..+.|++. .++ .|+|+|++||+++|++...... . .+..+.+...++. +++
T Consensus 245 ~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~ 324 (689)
T 1yiq_A 245 ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQ 324 (689)
T ss_dssp TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEE
Confidence 34677775 344 4999999999999999764221 1 0111111112332 333
Q ss_pred EEecCCceeEEEEEECCCCceeeeeee
Q 002016 194 VGYAGSSQFHAYQINAMNGELLNHETA 220 (981)
Q Consensus 194 vg~~g~~~~~v~aLd~~tG~~lw~~~v 220 (981)
.. .++.+++||..||+++|...+
T Consensus 325 ~~----~~G~l~~lD~~tG~~l~~~~~ 347 (689)
T 1yiq_A 325 AP----KNGFFYVIDRATGELLSAKGI 347 (689)
T ss_dssp CC----TTSEEEEEETTTCCEEEEEES
T ss_pred EC----CCCeEEEEECCCCCEeccccc
Confidence 22 234799999999999998753
No 19
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=5.8e-13 Score=151.05 Aligned_cols=172 Identities=13% Similarity=0.181 Sum_probs=96.7
Q ss_pred cccccccEeEEEeccCceeeeeeeecccCCCEEEEE-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeee-cCeEEEE
Q 002016 24 YEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITL 101 (981)
Q Consensus 24 yedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~-~~~vV~V 101 (981)
++.+.|+..|+.+. |.... .|...++.+|++ +.+|.|+|+|++||+.+|+.....+..+... +.. .++.+++
T Consensus 24 ~d~~tG~~~W~~~~-~~~~s----~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s-p~~~~~~~v~~ 97 (369)
T 2hz6_A 24 VSKRTGSIKWTLKE-DPVLQ----VPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS-PCRSSDGILYM 97 (369)
T ss_dssp EETTTCCEEEEEEC-CCSCC----CC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC-SCC-----CCC
T ss_pred EECCCCCEEEEecC-CCcee----cceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC-ceEecCCEEEE
Confidence 45678999999987 54332 333345655554 7999999999999999999766433212122 222 5667777
Q ss_pred EccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeee
Q 002016 102 SSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQ 180 (981)
Q Consensus 102 s~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~ 180 (981)
++.++.++|||+.||+++|+........ ..| .++.+++. .+|.|+++|+++|+++|++......
T Consensus 98 g~~dg~v~a~D~~tG~~~w~~~~~~~~~-----~~p------~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~---- 162 (369)
T 2hz6_A 98 GKKQDIWYVIDLLTGEKQQTLSSAFADS-----LSP------STSLLYLGRTEYTITMYDTKTRELRWNATYFDYA---- 162 (369)
T ss_dssp CEEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEEC----
T ss_pred EeCCCEEEEEECCCCcEEEEecCCCccc-----ccc------cCCEEEEEecCCEEEEEECCCCCEEEeEeccccc----
Confidence 6656799999999999999988654221 111 24567765 5899999999999999998643210
Q ss_pred EEEEeecC-----CeEEEEEecCCceeEEEEEECCCCceeeeeeeec
Q 002016 181 QVIQLDES-----DQIYVVGYAGSSQFHAYQINAMNGELLNHETAAF 222 (981)
Q Consensus 181 ~vv~s~~~-----~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~ 222 (981)
.. +..+ +.+|+.+..| .++++|+.||+.+|+..+..
T Consensus 163 ~~--~~~~~~~~~~~v~~~~~dg----~v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 163 AS--LPEDDVDYKMSHFVSNGDG----LVVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp CB--CCCCCTTCCCCEEEEETSC----EEEEECTTTCCEEEEEECSS
T ss_pred Cc--cccCCccccceEEEECCCC----EEEEEECCCCcEEEEecCCC
Confidence 01 1122 6788755544 69999999999999997543
No 20
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.07 E-value=2.8e-07 Score=100.76 Aligned_cols=217 Identities=12% Similarity=0.114 Sum_probs=137.5
Q ss_pred EeEEEeccCceeeeeeeecccCCCEEEEEcC-------CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEE-E
Q 002016 31 MDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-------ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITL-S 102 (981)
Q Consensus 31 ~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~-------~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~V-s 102 (981)
..++...-+.+....|. .+++.+|+++. ++.|..+|+++|+++|+...... ..++....++..+++ +
T Consensus 33 ~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 33 EMLRKAVGKGAYEMAYS---QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGN 107 (353)
T ss_dssp CEEEEEEESSEEEEEEE---TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEE
T ss_pred hhhhhhhccCccceEEC---CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEe
Confidence 34665554555444444 24678999884 56899999999999999887543 223322233444444 4
Q ss_pred ccCCEEEEEeCCCCcEeEEEeccCcccc--------CCceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEEEe
Q 002016 103 SDGSTLRAWNLPDGQMVWESFLRGSKHS--------KPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 103 ~~g~~V~A~da~tG~llWe~~~~~~~~s--------~~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~~~ 171 (981)
..++.|+.||..+|+.+|.......... ....+- ..++.+++.. ++.++.+|..+|+..+...
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s------~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD------DATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE------TTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEEC------CCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 5567999999999999999987542210 011111 1245677753 7899999999999999987
Q ss_pred ccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccC--ceEEE-cCcEEEEEECCCCeE
Q 002016 172 FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSIL 248 (981)
Q Consensus 172 ~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~--~~~~v-g~~~lv~~d~~~g~L 248 (981)
..... +..+..+.++..+|+.+..+ .+..+|+.+|+.++............ .+.+- .++.+++.+...+.+
T Consensus 182 ~~~~~--~~~~~~s~dg~~l~~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v 255 (353)
T 3vgz_A 182 NTGKM--STGLALDSEGKRLYTTNADG----ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEV 255 (353)
T ss_dssp CCCTT--CCCCEEETTTTEEEEECTTS----EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEE
T ss_pred CCCCc--cceEEECCCCCEEEEEcCCC----eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEE
Confidence 32221 12232234566777754433 58899999999998875532211111 12222 345666777667899
Q ss_pred EEEEeecCeeeEEEEee
Q 002016 249 VTVSFKNRKIAFQETHL 265 (981)
Q Consensus 249 ~v~~L~sg~~~~~~~~l 265 (981)
++.++.+++. ...+++
T Consensus 256 ~~~d~~~~~~-~~~~~~ 271 (353)
T 3vgz_A 256 LVVDTRNGNI-LAKVAA 271 (353)
T ss_dssp EEEETTTCCE-EEEEEC
T ss_pred EEEECCCCcE-EEEEEc
Confidence 9999988873 444443
No 21
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=98.99 E-value=9.3e-10 Score=123.25 Aligned_cols=191 Identities=8% Similarity=-0.007 Sum_probs=111.2
Q ss_pred cccccEeEEEeccC-ceeeeeeeecc-cCCCEEEEE--cCCCEEEEEECCCCccceEEEcCCCcceeee----eeee---
Q 002016 26 DQVGLMDWHQQYIG-KVKHAVFHTQK-TGRKRVVVS--TEENVIASLDLRHGEIFWRHVLGINDVVDGI----DIAL--- 94 (981)
Q Consensus 26 dqvG~~dW~~~~vG-~~~~~~f~~~~-~~~~~Vyva--T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l----~~~~--- 94 (981)
.+.|+..|+.+.-. .|... ...+. ..++.+|+. +.+|.|+|+|+++|...|+..++.-.....+ .+..
T Consensus 27 ~~tG~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~ 105 (339)
T 2be1_A 27 RRNGHIIWSIEPENFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDS 105 (339)
T ss_dssp TTTTEEEEEECGGGSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC------
T ss_pred CCCCcEEEEecCCccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecc
Confidence 45899999998731 12111 11111 135567776 6899999999999999998877532101001 1223
Q ss_pred ----cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc--cCCceeecccccc---cCCcEEEEE-eCCEEEEEECCCC
Q 002016 95 ----GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH--SKPLLLVPTNLKV---DKDSLILVS-SKGCLHAVSSIDG 164 (981)
Q Consensus 95 ----~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~--s~~~~~v~~~~~~---~~~~~V~V~-~~g~l~aLd~~tG 164 (981)
.++.|++++.+++++|+|+.||+++|++....+.. ......++..... ..++.|++. .+..+++++ ++|
T Consensus 106 ~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG 184 (339)
T 2be1_A 106 GKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDG 184 (339)
T ss_dssp ----CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTS
T ss_pred cccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCC
Confidence 78899988877899999999999999999765321 0000111100000 123456664 566777777 789
Q ss_pred cEeEEEeccCcce-eeeE-EE---EeecCCeEEEEEecCCceeEEEEEECCCCceee-eeeeecc
Q 002016 165 EILWTRDFAAESV-EVQQ-VI---QLDESDQIYVVGYAGSSQFHAYQINAMNGELLN-HETAAFS 223 (981)
Q Consensus 165 ~~~W~~~~~~~~~-~~~~-vv---~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw-~~~v~~p 223 (981)
+ +|..+...-.- .... +. ....++.+|+....| +|+|+|..+|+.+| +..+..|
T Consensus 185 ~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg----~v~A~d~~~G~~~W~~~~l~sP 244 (339)
T 2be1_A 185 A-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDK----SLLASDLDFRIARWVSPTFPGI 244 (339)
T ss_dssp C-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTT----EEEEECSTTCCEEEECCCCSSC
T ss_pred C-eEEEecccccccccccccccccccccCCcEEEECCCC----EEEEEECCCCcEEEEeecCCCC
Confidence 7 99865321100 0000 00 001235556544334 69999999999999 7754443
No 22
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=1.1e-08 Score=111.58 Aligned_cols=180 Identities=19% Similarity=0.185 Sum_probs=107.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
.++.||+++.+|.|+++|++ |+.+|+....... +... ....++.+++++.++.++++|+. |+.+|+........
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~-~~~~-~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~-- 179 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAI-YATP-IVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAIT-- 179 (330)
T ss_dssp ETTEEEEECTTSEEEEECTT-SCEEEEEECSSCC-CSCC-EECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCC--
T ss_pred ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCce-eeee-EEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCce--
Confidence 37788888888888888887 8888888765431 1122 22335556667666688888888 88888887654432
Q ss_pred CceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCC
Q 002016 132 PLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMN 211 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~t 211 (981)
..+.. +.++.+++.+ +.|+++| .+|+.+|+........ ..+. ...++.+|+.+..+ .++++| .+
T Consensus 180 ~~~~~------d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~--~~~~-~~~~g~l~v~t~~~----gl~~~~-~~ 243 (330)
T 3hxj_A 180 SAASI------GKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTV--TRPA-ISEDGTIYVTSLDG----HLYAIN-PD 243 (330)
T ss_dssp SCCEE------CTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCC--SCCE-ECTTSCEEEEETTT----EEEEEC-TT
T ss_pred eeeEE------cCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcce--eceE-ECCCCeEEEEcCCC----eEEEEC-CC
Confidence 11122 2355577766 8888888 7888888887553222 1111 12455777755544 378887 47
Q ss_pred CceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 212 GELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 212 G~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|+.+|+.... ......+++..++.+... ..+|.+++++. +|+
T Consensus 244 g~~~~~~~~~--~~~~~~~~~~~~g~l~v~-t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 244 GTEKWRFKTG--KRIESSPVIGNTDTIYFG-SYDGHLYAINP-DGT 285 (330)
T ss_dssp SCEEEEEECS--SCCCSCCEECTTSCEEEE-CTTCEEEEECT-TSC
T ss_pred CCEeEEeeCC--CCccccceEcCCCeEEEe-cCCCCEEEECC-CCc
Confidence 8888877532 222222333223333222 23456777764 454
No 23
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.91 E-value=6.9e-08 Score=105.11 Aligned_cols=169 Identities=21% Similarity=0.314 Sum_probs=116.7
Q ss_pred cccccccEeEEEeccCceeeeeeeecccC-CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE
Q 002016 24 YEDQVGLMDWHQQYIGKVKHAVFHTQKTG-RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS 102 (981)
Q Consensus 24 yedqvG~~dW~~~~vG~~~~~~f~~~~~~-~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs 102 (981)
|+.+ |+..|+...-+.. ...+..+ ++.+|+++.++.|+++|++ |+.+|+..+.... +..+ ....++.++++
T Consensus 122 ~d~~-g~~~~~~~~~~~~----~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~-~~~~-~~d~~g~l~v~ 193 (330)
T 3hxj_A 122 INTD-GTEKWRFKTKKAI----YATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAI-TSAA-SIGKDGTIYFG 193 (330)
T ss_dssp ECTT-SCEEEEEECSSCC----CSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCC-CSCC-EECTTCCEEEE
T ss_pred EcCC-CCEEEEEcCCCce----eeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCc-eeee-EEcCCCEEEEE
Confidence 4445 8889988753221 1222223 7789999999999999999 9999999876542 2222 23356667777
Q ss_pred ccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe-CCEEEEEECCCCcEeEEEeccCcceeeeE
Q 002016 103 SDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAAESVEVQQ 181 (981)
Q Consensus 103 ~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-~g~l~aLd~~tG~~~W~~~~~~~~~~~~~ 181 (981)
+ +.++++| .+|+.+|+........ . .+.. +.++.+++.+ ++.|+++| .+|+..|++........ .
T Consensus 194 t--~~l~~~d-~~g~~~~~~~~~~~~~-~-~~~~------~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~--~ 259 (330)
T 3hxj_A 194 S--DKVYAIN-PDGTEKWNFYAGYWTV-T-RPAI------SEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIES--S 259 (330)
T ss_dssp S--SSEEEEC-TTSCEEEEECCSSCCC-S-CCEE------CTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCS--C
T ss_pred e--CEEEEEC-CCCcEEEEEccCCcce-e-ceEE------CCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccc--c
Confidence 7 5799999 8999999998764332 1 1122 3355678875 79999997 58999999986543221 1
Q ss_pred EEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeee
Q 002016 182 VIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETA 220 (981)
Q Consensus 182 vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v 220 (981)
+. ...++.+|+.+..| .++++|+ +|+.+|...+
T Consensus 260 ~~-~~~~g~l~v~t~~g----gl~~~d~-~g~~~~~~~~ 292 (330)
T 3hxj_A 260 PV-IGNTDTIYFGSYDG----HLYAINP-DGTEKWNFET 292 (330)
T ss_dssp CE-ECTTSCEEEECTTC----EEEEECT-TSCEEEEEEC
T ss_pred ce-EcCCCeEEEecCCC----CEEEECC-CCcEEEEEEc
Confidence 11 13478888866554 3999997 8999999864
No 24
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.84 E-value=2.4e-06 Score=93.25 Aligned_cols=192 Identities=13% Similarity=0.128 Sum_probs=127.4
Q ss_pred CCCEEEEEcC-CCEEEEEECCCCccceEEEcCCCcc--------eeeeeeeecCeEEEEEc--cCCEEEEEeCCCCcEeE
Q 002016 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGINDV--------VDGIDIALGKYVITLSS--DGSTLRAWNLPDGQMVW 120 (981)
Q Consensus 52 ~~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~~~--------i~~l~~~~~~~vV~Vs~--~g~~V~A~da~tG~llW 120 (981)
+++.+|+++. ++.|..+|+++|+++|+..+..... ..++....+++.++++. .++.|+.||..+|+..+
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 4566888765 6899999999999999998854311 12232223444555544 36789999999999999
Q ss_pred EEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCc--ceeeeEEEEeecCCeEEEEEec
Q 002016 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE--SVEVQQVIQLDESDQIYVVGYA 197 (981)
Q Consensus 121 e~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~--~~~~~~vv~s~~~~~Vyvvg~~ 197 (981)
.....+... ....+- ..++.+++. .++.+..+|..+|+..|....... ...+..+..+.+++.+|+.+..
T Consensus 179 ~~~~~~~~~-~~~~~s------~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 179 AIQNTGKMS-TGLALD------SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp EECCCCTTC-CCCEEE------TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred EecCCCCcc-ceEEEC------CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 987433211 222222 124566775 589999999999999999877432 1113333334456678876544
Q ss_pred CCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 198 GSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 198 g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
++ .+..+|+.+|+.++......+. .+.+. .++.+++.+...+.+.+.++.+++
T Consensus 252 ~~---~v~~~d~~~~~~~~~~~~~~~~----~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 252 AA---EVLVVDTRNGNILAKVAAPESL----AVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp SS---EEEEEETTTCCEEEEEECSSCC----CEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CC---EEEEEECCCCcEEEEEEcCCCc----eEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 33 6899999999999887654331 23333 344566677667889999998887
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.59 E-value=8e-06 Score=90.27 Aligned_cols=172 Identities=9% Similarity=-0.031 Sum_probs=113.6
Q ss_pred cccccccccEeEEEeccCceeeeeeeecccCCCEEEEEc-CCCEEEEEECCCCccceEEEcCCCc----ceeeeeeeecC
Q 002016 22 SLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVST-EENVIASLDLRHGEIFWRHVLGIND----VVDGIDIALGK 96 (981)
Q Consensus 22 AlyedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~~----~i~~l~~~~~~ 96 (981)
.+++.+.|+..++....+.|..-.+. .++++|+++ .++.|..+|+++|++.++..+.... ...++ +..+
T Consensus 67 ~viD~~t~~~~~~i~~~~~p~~i~~~----~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i--~~~~ 140 (328)
T 3dsm_A 67 FAIDINTFKEVGRITGFTSPRYIHFL----SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQM--VQYG 140 (328)
T ss_dssp EEEETTTCCEEEEEECCSSEEEEEEE----ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCE--EEET
T ss_pred EEEECcccEEEEEcCCCCCCcEEEEe----CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceE--EEEC
Confidence 34455566666655443444433332 256899999 7899999999999999998876510 12234 2245
Q ss_pred eEEEEEc--cCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe--C----------CEEEEEECC
Q 002016 97 YVITLSS--DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K----------GCLHAVSSI 162 (981)
Q Consensus 97 ~vV~Vs~--~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~----------g~l~aLd~~ 162 (981)
+.++|+. .++.|..+|+++|+++++....... ....+ +.++.+++.+ + +.|+.+|.+
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p--~~i~~-------~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQP--TSLVM-------DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCB--CCCEE-------CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc--cceEE-------cCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 5566654 3679999999999999988764322 11211 3345677753 2 689999999
Q ss_pred CCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCcee
Q 002016 163 DGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 163 tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~l 215 (981)
+|++..+...+.+. .+..+..+.+++.+|+.. + .++.+|+.+|+..
T Consensus 212 t~~v~~~~~~~~g~-~p~~la~~~d~~~lyv~~--~----~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 212 TFTVEKQFKFKLGD-WPSEVQLNGTRDTLYWIN--N----DIWRMPVEADRVP 257 (328)
T ss_dssp TTEEEEEEECCTTC-CCEEEEECTTSCEEEEES--S----SEEEEETTCSSCC
T ss_pred CCeEEEEEecCCCC-CceeEEEecCCCEEEEEc--c----EEEEEECCCCcee
Confidence 99998887765332 244443333567788743 2 3889999999875
No 26
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.44 E-value=0.00016 Score=80.34 Aligned_cols=215 Identities=10% Similarity=0.122 Sum_probs=133.5
Q ss_pred ccccccccccEeEEEeccCceeeeeeeecccCCCEEEEE-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEE
Q 002016 21 LSLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVI 99 (981)
Q Consensus 21 ~AlyedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV 99 (981)
.-+++-+.|+..+....-+.+....|. .+++.+|++ +.++.|..+|.++|+.+++...... +..+....++..+
T Consensus 14 v~v~d~~~~~~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~--v~~~~~spdg~~l 88 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGSNPMGAVIS---PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS--PQGVAVSPDGKQV 88 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEEC---TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEE
T ss_pred EEEEECCCCeEEEEeecCCCcceEEEC---CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCC--ccceEECCCCCEE
Confidence 345555667766665544444444444 235567554 5889999999999999998877653 3333222334444
Q ss_pred EE-EccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcc
Q 002016 100 TL-SSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAES 176 (981)
Q Consensus 100 ~V-s~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~ 176 (981)
++ +..++.|+.||..+|+.++......... ...+. ..+..+++. .++.|+.+|..+|+..+.......
T Consensus 89 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~--~~~~s------~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~- 159 (391)
T 1l0q_A 89 YVTNMASSTLSVIDTTSNTVAGTVKTGKSPL--GLALS------PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS- 159 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEE--EEEEC------TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS-
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeCCCCcc--eEEEC------CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC-
Confidence 44 4456899999999999999887654321 12121 123456554 389999999999999988876433
Q ss_pred eeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEEC--CCCeEEEEEe
Q 002016 177 VEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDT--TRSILVTVSF 253 (981)
Q Consensus 177 ~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~--~~g~L~v~~L 253 (981)
+..+.....+..+|+.+..++ .+..+|+.+|+.+..... ..... .+.+- .+..+++.+. .++.+++.++
T Consensus 160 --~~~~~~~~dg~~l~~~~~~~~---~v~~~d~~~~~~~~~~~~--~~~~~-~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 160 --PKGIAVTPDGTKVYVANFDSM---SISVIDTVTNSVIDTVKV--EAAPS-GIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp --EEEEEECTTSSEEEEEETTTT---EEEEEETTTTEEEEEEEC--SSEEE-EEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred --cceEEECCCCCEEEEEeCCCC---EEEEEECCCCeEEEEEec--CCCcc-ceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 223322335556766554433 588899999987765532 11111 12222 2345555543 4678999999
Q ss_pred ecCe
Q 002016 254 KNRK 257 (981)
Q Consensus 254 ~sg~ 257 (981)
.+++
T Consensus 232 ~~~~ 235 (391)
T 1l0q_A 232 GTNK 235 (391)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 8876
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.44 E-value=1.6e-05 Score=87.88 Aligned_cols=188 Identities=9% Similarity=0.023 Sum_probs=119.7
Q ss_pred CCCEEEEEcC-CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCcc-
Q 002016 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSK- 128 (981)
Q Consensus 52 ~~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~- 128 (981)
.++++|+++. .|.|..+|++||+++++...... ..++....+ +.++++. .++.|..||+++|++.++..+....
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~--p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~ 128 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS--PRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDM 128 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS--EEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCT
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC--CcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccc
Confidence 3678998876 58999999999999998753221 223422234 4667765 6789999999999999998875411
Q ss_pred -ccCCceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCc----
Q 002016 129 -HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSS---- 200 (981)
Q Consensus 129 -~s~~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~---- 200 (981)
...+..+. ..++.++|.. ++.|..+|.++|++.++...... |..+. ...++.+|+++..+..
T Consensus 129 ~~~~p~~i~------~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~---p~~i~-~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 129 ESGSTEQMV------QYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ---PTSLV-MDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp TTCBCCCEE------EETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC---BCCCE-ECTTSEEEEEBCCBCTTCSS
T ss_pred cCCCcceEE------EECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC---ccceE-EcCCCCEEEEECCCccCCcc
Confidence 00011111 1256778863 78999999999999998876432 22332 2346788876543200
Q ss_pred ---eeEEEEEECCCCceeeeeeeeccCCccCceEEEc--CcEEEEEECCCCeEEEEEeecCe
Q 002016 201 ---QFHAYQINAMNGELLNHETAAFSGGFVGDVALVS--SDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 201 ---~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~vg--~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
...|+.+|+.+|++.....+.. +-....+.+. ++.+++.+. .++++|+.+++
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~~~~--g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~ 255 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFKFKL--GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADR 255 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEECCT--TCCCEEEEECTTSCEEEEESS---SEEEEETTCSS
T ss_pred ccCCceEEEEECCCCeEEEEEecCC--CCCceeEEEecCCCEEEEEcc---EEEEEECCCCc
Confidence 1369999999999876654321 1111122222 445555543 67888887776
No 28
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.43 E-value=0.00045 Score=76.61 Aligned_cols=183 Identities=9% Similarity=0.124 Sum_probs=119.3
Q ss_pred EEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEE-EccCCEEEEEeCCCCcEeEEEeccCccccCCce
Q 002016 56 VVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLL 134 (981)
Q Consensus 56 VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~V-s~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~ 134 (981)
+++++.+|.|...|.++|+.+++...... +..+....++..+++ ++.++.|+.||..+|+.++......... ...
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~--~~~ 80 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGSN--PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ--GVA 80 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE--EEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCCC--cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc--ceE
Confidence 45567789999999999999998776543 333322234444444 5466899999999999999988765322 222
Q ss_pred eecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCC
Q 002016 135 LVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (981)
Q Consensus 135 ~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG 212 (981)
+. ..+..+++.. ++.++.+|..+|+.++....... +..+..+..+..+|+.+...+ .+..+|+.+|
T Consensus 81 ~s------pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~---~v~~~d~~~~ 148 (391)
T 1l0q_A 81 VS------PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS---PLGLALSPDGKKLYVTNNGDK---TVSVINTVTK 148 (391)
T ss_dssp EC------TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS---EEEEEECTTSSEEEEEETTTT---EEEEEETTTT
T ss_pred EC------CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC---cceEEECCCCCEEEEEeCCCC---EEEEEECCCC
Confidence 22 1244566643 69999999999999988775432 223322334556766654333 6888999999
Q ss_pred ceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 213 ELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 213 ~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+.++..... .... .+.+- .+..+++.....+.+++.++.+++
T Consensus 149 ~~~~~~~~~--~~~~-~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 149 AVINTVSVG--RSPK-GIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEEEECC--SSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cEEEEEecC--CCcc-eEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 988776432 1111 12222 334555555567889999998876
No 29
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.41 E-value=0.00049 Score=81.79 Aligned_cols=196 Identities=12% Similarity=0.018 Sum_probs=118.9
Q ss_pred CCEEEEE-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeC--CCCcEeEEEeccCccc
Q 002016 53 RKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNL--PDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da--~tG~llWe~~~~~~~~ 129 (981)
++++|++ +.+|.|..+|..+|+++.+...... ..++...-++..+++++.++.|+.||. .+|+.+-+........
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~ 225 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 225 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc
Confidence 4456655 5678999999999999988776443 333322335556776666689999999 8999988777543221
Q ss_pred cCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCc---------ceeeeEEEEeecCCeEEEEEecC
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAE---------SVEVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~---------~~~~~~vv~s~~~~~Vyvvg~~g 198 (981)
...+-|. ....++.+++. .++.+..+|..+|+++.+...... ...+..+..+..+..+|+ +..+
T Consensus 226 --~va~sp~--~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v-s~~~ 300 (543)
T 1nir_A 226 --SVESSKF--KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV-NVKE 300 (543)
T ss_dssp --EEEECCS--TTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE-EETT
T ss_pred --eEEeCCC--cCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE-EECC
Confidence 1111100 00025577775 489999999999999988765311 101233332334455554 4443
Q ss_pred CceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCee
Q 002016 199 SSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 199 ~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
. .++..+|..+++.+....+.....+. ...+- .+..+++.....+.+.+.|+.+|++
T Consensus 301 ~--g~i~vvd~~~~~~l~~~~i~~~~~~~-~~~~spdg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 301 T--GKVLLVNYKDIDNLTVTSIGAAPFLH-DGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp T--TEEEEEECTTSSSCEEEEEECCSSCC-CEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred C--CeEEEEEecCCCcceeEEeccCcCcc-CceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence 2 26888999988776533333222221 22232 3344555555567899999998873
No 30
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.30 E-value=0.0022 Score=72.94 Aligned_cols=182 Identities=12% Similarity=0.076 Sum_probs=119.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|..+|+.+++..-.. ..+..+ ...++.++.++.++.|+.||..+|+.+..........
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~--~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v-- 202 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT-GGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-- 202 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCS-SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCEEEE--EecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcE--
Confidence 46789999999999999999999887754222 233333 2334555556667899999999999998887554332
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
..+. -.++.+++. .+|.+..+|..+|+..+......... ..+ ...+..++..+..| .+...|+.
T Consensus 203 --~~~~-----~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v--~~~--~~~~~~l~~~~~dg----~i~iwd~~ 267 (445)
T 2ovr_B 203 --RCMH-----LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV--RCV--QYDGRRVVSGAYDF----MVKVWDPE 267 (445)
T ss_dssp --EEEE-----EETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCE--EEE--EECSSCEEEEETTS----CEEEEEGG
T ss_pred --EEEE-----ecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccE--EEE--EECCCEEEEEcCCC----EEEEEECC
Confidence 1110 123445554 59999999999999999887554332 122 12455555544444 48888999
Q ss_pred CCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+.+...... .+ .++...+..+++.. .++.+++-++.+++
T Consensus 268 ~~~~~~~~~~~~~-~v--~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 268 TETCLHTLQGHTN-RV--YSLQFDGIHVVSGS-LDTSIRVWDVETGN 310 (445)
T ss_dssp GTEEEEEECCCSS-CE--EEEEECSSEEEEEE-TTSCEEEEETTTCC
T ss_pred CCcEeEEecCCCC-ce--EEEEECCCEEEEEe-CCCeEEEEECCCCC
Confidence 9998877632111 11 12222555666655 46889999998877
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.21 E-value=0.00031 Score=75.91 Aligned_cols=188 Identities=10% Similarity=0.051 Sum_probs=122.7
Q ss_pred CCEEEEEcC---CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc-Ccc
Q 002016 53 RKRVVVSTE---ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR-GSK 128 (981)
Q Consensus 53 ~~~VyvaT~---~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~-~~~ 128 (981)
++++|+++. .+.|..+|++||+++=+..++......++ ...++.+++.+..++.+..+|++|++++-+.... .+
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi-~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~- 108 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGL-TLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD- 108 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEE-EEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS-
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEE-EEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC-
Confidence 379999986 58999999999999999888654211234 2234444443545689999999999999998765 22
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcce---eeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV---EVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~---~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
+..+.+ + ++.+++. .++.|+.+|+++.++.=+........ .+..+. ..++.+|+.....+ .+
T Consensus 109 ---g~glt~-----D-g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele--~~dg~lyvn~~~~~---~V 174 (266)
T 2iwa_A 109 ---GWGLAT-----D-GKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE--YINGEVWANIWQTD---CI 174 (266)
T ss_dssp ---CCEEEE-----C-SSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE--EETTEEEEEETTSS---EE
T ss_pred ---eEEEEE-----C-CCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEE--EECCEEEEecCCCC---eE
Confidence 222331 2 4557775 57899999999999887776542211 122332 23678997654443 69
Q ss_pred EEEECCCCceeeeeeeecc--C-----C----ccCceEEE-cCcEEEEEECCCCeEEEEEeecC
Q 002016 205 YQINAMNGELLNHETAAFS--G-----G----FVGDVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p--~-----~----~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
..+|++||+++-...++.. . . .-..+.+- +++.+.++....+.++++++...
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999999877765311 0 0 00112222 34566667666777888877653
No 32
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.19 E-value=0.0018 Score=72.83 Aligned_cols=180 Identities=13% Similarity=0.067 Sum_probs=101.8
Q ss_pred EEEEEECCCC--ccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc-CCceeecccc
Q 002016 64 VIASLDLRHG--EIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS-KPLLLVPTNL 140 (981)
Q Consensus 64 ~L~ALd~~tG--~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s-~~~~~v~~~~ 140 (981)
.|..+|+++| +.+.+...... ...+....++.+++.++.++.|+.||..+|+............. .....+.
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~--- 176 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQ--PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETIS--- 176 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSC--BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEE---
T ss_pred EEEEECCCCCcceEEEEEcCCCC--ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEE---
Confidence 7888888777 44444433322 22221122455555555667899999999999864432110000 0000010
Q ss_pred cccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeee
Q 002016 141 KVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 141 ~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
...++.+++. .++.+..+|..+|+..++....... +..+.....+..+|+.+..++ .+..+|+.+|+.++..
T Consensus 177 -~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~---~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 177 -IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW--SKILLYDPIRDLVYCSNWISE---DISVIDRKTKLEIRKT 250 (433)
T ss_dssp -EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS--EEEEEEETTTTEEEEEETTTT---EEEEEETTTTEEEEEC
T ss_pred -EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC--eeEEEEcCCCCEEEEEecCCC---cEEEEECCCCcEEEEe
Confidence 0123445554 4899999999999999988743322 223322345667777664433 5889999999988765
Q ss_pred eeeccCCccCceEEE-cCcEEEEEEC-------CCCeEEEEEeecCe
Q 002016 219 TAAFSGGFVGDVALV-SSDTLVTLDT-------TRSILVTVSFKNRK 257 (981)
Q Consensus 219 ~v~~p~~~~~~~~~v-g~~~lv~~d~-------~~g~L~v~~L~sg~ 257 (981)
... ..+. .+.+. .++.+++... .++.+++.++.+++
T Consensus 251 ~~~--~~~~-~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 251 DKI--GLPR-GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp CCC--SEEE-EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred cCC--CCce-EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 321 1111 11121 2334444442 24678888888876
No 33
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.17 E-value=0.0031 Score=67.59 Aligned_cols=151 Identities=7% Similarity=0.014 Sum_probs=99.1
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcCCCc-ceeeeeeeecCeEEEE-EccCCEEEEEeCCCCcEeEEEeccCcc---
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGIND-VVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRGSK--- 128 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~-~i~~l~~~~~~~vV~V-s~~g~~V~A~da~tG~llWe~~~~~~~--- 128 (981)
+.+++++.++.|..+|+.+|+++++..++... ....+....++..+++ +..++.|+.||..+|+.+++.......
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 35788889999999999999999998876521 1223322223334444 555679999999999999988764310
Q ss_pred -ccCCceeecccccccCCcEEEEE-------------eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEE
Q 002016 129 -HSKPLLLVPTNLKVDKDSLILVS-------------SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVV 194 (981)
Q Consensus 129 -~s~~~~~v~~~~~~~~~~~V~V~-------------~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv 194 (981)
......+- ..++.+++. .++.+..+|..+|+..+....+.. +..+..+.++..+|+.
T Consensus 82 ~~~~~~~~s------~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 82 KSLFGAALS------PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ---ITMLAWARDGSKLYGL 152 (337)
T ss_dssp ECTTCEEEC------TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS---CCCEEECTTSSCEEEE
T ss_pred ccccceEEC------CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC---cceeEECCCCCEEEEe
Confidence 10112121 123466665 259999999999999998876432 2223223345557664
Q ss_pred EecCCceeEEEEEECCCCceeeeee
Q 002016 195 GYAGSSQFHAYQINAMNGELLNHET 219 (981)
Q Consensus 195 g~~g~~~~~v~aLd~~tG~~lw~~~ 219 (981)
.+ .+..+|+.+|+.+....
T Consensus 153 --~~----~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 153 --GR----DLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp --SS----SEEEEETTTTEEEEEEC
T ss_pred --CC----eEEEEECCCCcEeeeee
Confidence 33 38899999999886654
No 34
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.17 E-value=0.0037 Score=70.16 Aligned_cols=192 Identities=13% Similarity=0.122 Sum_probs=117.5
Q ss_pred CCEEEEE-cCCCEEEEEECCCCccceEEEcCC----CcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVS-TEENVIASLDLRHGEIFWRHVLGI----NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~----~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
++.++++ +.++.|..+|.++|+......... ...+..+....++.+++.++.++.++.||..+|+.+++......
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~ 212 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK 212 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC
Confidence 4566655 456789999999999875432211 11222332223455555566668999999999999999875432
Q ss_pred cccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCC----ce
Q 002016 128 KHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGS----SQ 201 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~----~~ 201 (981)
.. ....+- ..+..+++. .++.+..+|..+|+..+....... +..+.....+..+++.+..++ .+
T Consensus 213 ~~-~~~~~~------~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 213 WS-KILLYD------PIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL---PRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp SE-EEEEEE------TTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE---EEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred Ce-eEEEEc------CCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC---ceEEEEcCCCCEEEEEECCCCccccCC
Confidence 21 112121 124456664 389999999999999888765432 333332334556776654321 13
Q ss_pred eEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 202 FHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 202 ~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+..+|+.+|+.++..... .... .+.+. .++.+++....++.+.+.++.+++
T Consensus 283 g~i~~~d~~~~~~~~~~~~~--~~~~-~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPP--GNKR-HIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEE--ECEE-EEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred CeEEEEECCCCcEEeeccCC--CCcc-eEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 47889999999887765221 1111 12222 233555665667899999998877
No 35
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.12 E-value=0.00097 Score=71.60 Aligned_cols=139 Identities=10% Similarity=0.058 Sum_probs=87.1
Q ss_pred cccccccccEeEEEeccC---ceeeeeeeecccCCCEEEEEc-CCCEEEEEECCCCccceEEEcCCCc----ceeeeeee
Q 002016 22 SLYEDQVGLMDWHQQYIG---KVKHAVFHTQKTGRKRVVVST-EENVIASLDLRHGEIFWRHVLGIND----VVDGIDIA 93 (981)
Q Consensus 22 AlyedqvG~~dW~~~~vG---~~~~~~f~~~~~~~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~~----~i~~l~~~ 93 (981)
.+++-+.|+..+....-+ .+....|. .+++.+|+++ .++.|..+|+.+|+++++..+.... ....+...
T Consensus 14 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s---~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s 90 (337)
T 1pby_B 14 VVIDTEKMAVDKVITIADAGPTPMVPMVA---PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALS 90 (337)
T ss_dssp EEEETTTTEEEEEEECTTCTTCCCCEEEC---TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEEC
T ss_pred EEEECCCCcEEEEEEcCCCCCCccceEEc---CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEEC
Confidence 455556677766665534 34444443 2355677765 4689999999999999998875411 12223222
Q ss_pred ecCeEEEEEc------------cCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEEC
Q 002016 94 LGKYVITLSS------------DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSS 161 (981)
Q Consensus 94 ~~~~vV~Vs~------------~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~ 161 (981)
.++..++++. .++.|+.||..+|+.++........ ....+. ..++.+++. ++.++.+|.
T Consensus 91 ~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~--~~~~~s------~dg~~l~~~-~~~i~~~d~ 161 (337)
T 1pby_B 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI--TMLAWA------RDGSKLYGL-GRDLHVMDP 161 (337)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC--CCEEEC------TTSSCEEEE-SSSEEEEET
T ss_pred CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc--ceeEEC------CCCCEEEEe-CCeEEEEEC
Confidence 2344555553 2479999999999999988764332 122222 113334444 788999999
Q ss_pred CCCcEeEEEec
Q 002016 162 IDGEILWTRDF 172 (981)
Q Consensus 162 ~tG~~~W~~~~ 172 (981)
.+|++......
T Consensus 162 ~~~~~~~~~~~ 172 (337)
T 1pby_B 162 EAGTLVEDKPI 172 (337)
T ss_dssp TTTEEEEEECS
T ss_pred CCCcEeeeeec
Confidence 99888776654
No 36
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.97 E-value=0.0076 Score=71.47 Aligned_cols=195 Identities=9% Similarity=0.009 Sum_probs=112.6
Q ss_pred cCCCEEEEEcCCCEEEEEEC--CCCccceEEEcCCCcceeeeeeee----cCeEEEEEc-cCCEEEEEeCCCCcEeEEEe
Q 002016 51 TGRKRVVVSTEENVIASLDL--RHGEIFWRHVLGINDVVDGIDIAL----GKYVITLSS-DGSTLRAWNLPDGQMVWESF 123 (981)
Q Consensus 51 ~~~~~VyvaT~~g~L~ALd~--~tG~ivWR~~l~~~~~i~~l~~~~----~~~vV~Vs~-~g~~V~A~da~tG~llWe~~ 123 (981)
.+++.+|+++.+|.|..+|. ++|+++-+...... ..++...- ++..+++++ .++.|..||..+|+++....
T Consensus 188 pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~--p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 188 ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE--ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE--EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC--cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 35778999999999999999 89998777664332 22332223 455676665 46899999999999999887
Q ss_pred ccCccc------cC--CceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEE
Q 002016 124 LRGSKH------SK--PLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYV 193 (981)
Q Consensus 124 ~~~~~~------s~--~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (981)
..+... .. ...+... ..++.+++. .+|.|..+|..+++.+.....+.+.. +..+..+.++..+|+
T Consensus 266 ~~g~~~~~~~~~~~~~v~~i~~s----~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~-~~~~~~spdg~~l~v 340 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRVAAIIAS----HEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPF-LHDGGWDSSHRYFMT 340 (543)
T ss_dssp CCEECSSSCCEESCCCEEEEEEC----SSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSS-CCCEEECTTSCEEEE
T ss_pred ccCcccCccccccCCceEEEEEC----CCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcC-ccCceECCCCCEEEE
Confidence 643111 00 0011100 113345553 37899999998887554222221111 222322234445665
Q ss_pred EEecCCceeEEEEEECCCCceeeeeeeec-cCCccCceEEE-cCcEEEEEE-CCCCeEEEEEeec
Q 002016 194 VGYAGSSQFHAYQINAMNGELLNHETAAF-SGGFVGDVALV-SSDTLVTLD-TTRSILVTVSFKN 255 (981)
Q Consensus 194 vg~~g~~~~~v~aLd~~tG~~lw~~~v~~-p~~~~~~~~~v-g~~~lv~~d-~~~g~L~v~~L~s 255 (981)
.+...+ .+..+|+.+|+.+....+.. |....+..++- ..+.++++. ...+.+.+.++.+
T Consensus 341 a~~~~~---~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSN---KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEGGGT---EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EecCCC---eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 544332 47779999999887665422 22111212221 223333333 2457888888877
No 37
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.94 E-value=0.0069 Score=68.70 Aligned_cols=183 Identities=8% Similarity=0.042 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
.++.+++++.+|.|...|.++|+.++...-... .+..+ ..++..++.++.++.++.||..+|+.+++........
T Consensus 208 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-- 282 (445)
T 2ovr_B 208 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV-- 282 (445)
T ss_dssp ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS-CEEEE--EECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE--
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-cEEEE--EECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce--
Confidence 367899999999999999999999888654332 23334 2344555556667799999999999999887554322
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
..+. -.+..+++. .+|.+..+|..+|+..++........ ..+ ...++.++..+.+| .+...|..
T Consensus 283 --~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~~~--~~~~~~l~~~~~dg----~i~vwd~~ 347 (445)
T 2ovr_B 283 --YSLQ-----FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGM--ELKDNILVSGNADS----TVKIWDIK 347 (445)
T ss_dssp --EEEE-----ECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE--EEE--EEETTEEEEEETTS----CEEEEETT
T ss_pred --EEEE-----ECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE--EEE--EEeCCEEEEEeCCC----eEEEEECC
Confidence 1110 124455555 49999999999999999886544332 122 23455555544444 48888999
Q ss_pred CCceeeeeeeeccCCccC--ceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~--~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+....... .-.+ .++...++.+++.. .+|.+++-++.+|+
T Consensus 348 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~-~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 348 TGQCLQTLQGPN--KHQSAVTCLQFNKNFVITSS-DDGTVKLWDLKTGE 393 (445)
T ss_dssp TCCEEEEECSTT--SCSSCEEEEEECSSEEEEEE-TTSEEEEEETTTCC
T ss_pred CCcEEEEEccCC--CCCCCEEEEEECCCEEEEEe-CCCeEEEEECCCCc
Confidence 999887663211 1111 12333556666665 46899999999887
No 38
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.94 E-value=0.00035 Score=75.21 Aligned_cols=153 Identities=14% Similarity=0.114 Sum_probs=106.7
Q ss_pred CCCEEEEEcCC-CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 52 GRKRVVVSTEE-NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~-g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
+++++|+++.. |.|..+|++||+++-+. ++...-..++ ...++.++.++..++.+..+|++|++++=+.+...+..
T Consensus 63 ~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGi-t~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw- 139 (268)
T 3nok_A 63 HQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGL-ASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW- 139 (268)
T ss_dssp ETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEE-EECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-
T ss_pred ECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEE-EEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-
Confidence 47899999865 78999999999999998 7654211234 23455555545567899999999999999998764322
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCccee---eeEEEEeecCCeEEEEEecCCceeEEEE
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE---VQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~---~~~vv~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
.+.. + ++.+++. .+++|+-+|++|++++=+......... +-.+ ...++.+|+...... .+..
T Consensus 140 ---GLt~-----D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeL--e~~dG~lyanvw~s~---~I~v 205 (268)
T 3nok_A 140 ---GLCY-----W-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINEL--ECANGVIYANIWHSS---DVLE 205 (268)
T ss_dssp ---CEEE-----E-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEE--EEETTEEEEEETTCS---EEEE
T ss_pred ---EEec-----C-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccccccc--EEeCCEEEEEECCCC---eEEE
Confidence 2221 2 4566776 488999999999998876655432111 1111 124778997655443 6999
Q ss_pred EECCCCceeeeeeee
Q 002016 207 INAMNGELLNHETAA 221 (981)
Q Consensus 207 Ld~~tG~~lw~~~v~ 221 (981)
+|++||+++-...++
T Consensus 206 IDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 206 IDPATGTVVGVIDAS 220 (268)
T ss_dssp ECTTTCBEEEEEECH
T ss_pred EeCCCCcEEEEEECC
Confidence 999999998776554
No 39
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.92 E-value=0.0082 Score=71.73 Aligned_cols=196 Identities=13% Similarity=0.020 Sum_probs=114.8
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCC--CCcEeEEEeccCccc
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP--DGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~--tG~llWe~~~~~~~~ 129 (981)
++.+||+. ++|.|..+|..||+++.+...... ..++...-++..+++++.++.|..||.. +++++.+........
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~--p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA--VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC--ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 44666664 579999999999999999887543 2233223355567777767799999996 999998877643321
Q ss_pred cCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCc---------ceeeeEEEEeecCCeEEEEEecC
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAE---------SVEVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~---------~~~~~~vv~s~~~~~Vyvvg~~g 198 (981)
...+-+. ....++.++|. .++.+..+|..+++++.+...... ...+..+..+ ..+..+++....
T Consensus 244 --~ia~s~~--~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s-~~~~~~vv~~~~ 318 (567)
T 1qks_A 244 --SIETSKM--EGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS-HYRPEFIVNVKE 318 (567)
T ss_dssp --EEEECCS--TTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC-SSSSEEEEEETT
T ss_pred --eeEEccc--cCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc-CCCCEEEEEecC
Confidence 1111100 00025578885 489999999999999998875321 0011223222 222344444432
Q ss_pred CceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCee
Q 002016 199 SSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 199 ~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
. .++..+|..+.+.+--..+.....+. ...+- .+..+++.+...+.+.++|++++++
T Consensus 319 ~--g~v~~vd~~~~~~~~v~~i~~~~~~~-d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 319 T--GKILLVDYTDLNNLKTTEISAERFLH-DGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp T--TEEEEEETTCSSEEEEEEEECCSSEE-EEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred C--CeEEEEecCCCccceeeeeecccccc-CceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 1 25777777765533222222211111 11111 2334555555567899999988873
No 40
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.91 E-value=0.026 Score=61.49 Aligned_cols=189 Identities=14% Similarity=0.148 Sum_probs=110.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++.+++++.++.|.--|.++++..-+..+... ..+..+.....+..++.++.++.|+.||..+|+.+.......... .
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~-~ 126 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA-W 126 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCC-C
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccE-E
Confidence 45799999999999988888865444445433 223333222233455546667899999999999998877554322 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+-| .+..++.. .+|.+..+|..+|+..++........ ..+..+..+..+...+..| .+...|+.
T Consensus 127 ~~~~sp------dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v--~~~~~spdg~~lasg~~dg----~i~iwd~~ 194 (321)
T 3ow8_A 127 TLAFSP------DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI--LSIAYSPDGKYLASGAIDG----IINIFDIA 194 (321)
T ss_dssp CEEECT------TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCE--EEEEECTTSSEEEEEETTS----CEEEEETT
T ss_pred EEEECC------CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceE--EEEEECCCCCEEEEEcCCC----eEEEEECC
Confidence 222221 23344444 48999999999999998876654332 2222223344444433334 47888999
Q ss_pred CCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+.+..-.. ..+. .+.+- .+..+++.. .++.+++-++.++.
T Consensus 195 ~~~~~~~~~~h~-~~v~-~l~~spd~~~l~s~s-~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 195 TGKLLHTLEGHA-MPIR-SLTFSPDSQLLVTAS-DDGYIKIYDVQHAN 239 (321)
T ss_dssp TTEEEEEECCCS-SCCC-EEEECTTSCEEEEEC-TTSCEEEEETTTCC
T ss_pred CCcEEEEEcccC-Ccee-EEEEcCCCCEEEEEc-CCCeEEEEECCCcc
Confidence 998876542111 1111 12221 233555443 45677777776654
No 41
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.90 E-value=0.025 Score=64.17 Aligned_cols=190 Identities=11% Similarity=0.059 Sum_probs=111.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|.++|+.+++..-.. ..+..+. ...++.++.++.++.++.||..+|+.+.......... .
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~-~~V~~l~-~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v-~ 207 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHD-GGVWALK-YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV-R 207 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEE-ECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-E
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCC-cCEEEEE-EcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCcc-E
Confidence 46789999999999999999999988865322 2343342 2233355556667899999999999998887554332 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCc---------------------ceeeeEEEEeecCC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE---------------------SVEVQQVIQLDESD 189 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~---------------------~~~~~~vv~s~~~~ 189 (981)
...+.+. ..+..++.. .+|.+...|..++........... ......+ ...+.
T Consensus 208 ~l~~~~~----~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 208 CLDIVEY----KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN 281 (464)
T ss_dssp EEEEEES----SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT
T ss_pred EEEEecC----CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC
Confidence 1222210 112334444 489999999988876554322110 0001111 23445
Q ss_pred eEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 190 QIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 190 ~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.++..+..| .+...|..+|+.+....... ..+. .+.+- .++.+++.. .++.+++-++.+++
T Consensus 282 ~l~~~~~d~----~i~vwd~~~~~~~~~~~~~~-~~v~-~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 282 IVVSGSYDN----TLIVWDVAQMKCLYILSGHT-DRIY-STIYDHERKRCISAS-MDTTIRIWDLENGE 343 (464)
T ss_dssp EEEEEETTS----CEEEEETTTTEEEEEECCCS-SCEE-EEEEETTTTEEEEEE-TTSCEEEEETTTTE
T ss_pred EEEEEeCCC----eEEEEECCCCcEEEEecCCC-CCEE-EEEEcCCCCEEEEEe-CCCcEEEEECCCCc
Confidence 555444444 48888999999887653111 1111 12222 334555555 46889999998887
No 42
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.0035 Score=66.73 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=107.7
Q ss_pred CCCEEEEEcCC---CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~~---g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
+++++|+++.. +.|..+|++||+++=+..++...-..++ ...++.++.++...+.+..+|++|++++=+.+...+.
T Consensus 29 ~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi-~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G 107 (243)
T 3mbr_X 29 LRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGI-VAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG 107 (243)
T ss_dssp ETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEE-EEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC
T ss_pred ECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEE-EEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc
Confidence 36899999986 4999999999999988888664211234 2345555555656789999999999999999886533
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEE-EeecCCeEEEEEecCCceeEEEE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVI-QLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv-~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
. .+. ..++.+++. .+++|+.+|++|.+++=+............+. ....++.+|+-..... .+..
T Consensus 108 w----glt------~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~---~I~v 174 (243)
T 3mbr_X 108 W----ALT------SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTS---RIAR 174 (243)
T ss_dssp C----EEE------ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTT---EEEE
T ss_pred e----EEe------eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCC---eEEE
Confidence 2 233 124456665 57899999999999886665542211111110 0124788997554443 5999
Q ss_pred EECCCCceeeeeeee
Q 002016 207 INAMNGELLNHETAA 221 (981)
Q Consensus 207 Ld~~tG~~lw~~~v~ 221 (981)
+|++||+++-...++
T Consensus 175 IDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQ 189 (243)
T ss_dssp ECTTTCBEEEEEECG
T ss_pred EECCCCCEEEEEECC
Confidence 999999999777554
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.86 E-value=0.0084 Score=64.01 Aligned_cols=188 Identities=9% Similarity=0.068 Sum_probs=112.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
+++.+++++.+|.|...|.++++......+... ..+..+.....+..+++++.++.++.||..+|+............
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i- 186 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA- 186 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce-
Confidence 456799999999999999999985555544332 223333222244455556666799999999999998887544322
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
....+. ..+..+++. .+|.+..+|..+|+........... ..+..+..+..+++.+..| .+..+|.
T Consensus 187 ~~~~~~------~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~~~~~~~----~i~~~~~ 253 (337)
T 1gxr_A 187 SCIDIS------NDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI---FSLGYCPTGEWLAVGMESS----NVEVLHV 253 (337)
T ss_dssp EEEEEC------TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE---EEEEECTTSSEEEEEETTS----CEEEEET
T ss_pred EEEEEC------CCCCEEEEEecCCcEEEEECCCCceEeeecCCCce---EEEEECCCCCEEEEEcCCC----cEEEEEC
Confidence 112221 123445554 4999999999999999888654432 2232223444444433334 4888899
Q ss_pred CCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 210 MNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 210 ~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+++..... .....+. .+.+. .+..+++.. .+|.+++-++.+++
T Consensus 254 ~~~~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 254 NKPDKYQLH--LHESCVL-SLKFAYCGKWFVSTG-KDNLLNAWRTPYGA 298 (337)
T ss_dssp TSSCEEEEC--CCSSCEE-EEEECTTSSEEEEEE-TTSEEEEEETTTCC
T ss_pred CCCCeEEEc--CCcccee-EEEECCCCCEEEEec-CCCcEEEEECCCCe
Confidence 988764221 1111111 12222 234555555 46888888888876
No 44
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.84 E-value=0.0023 Score=68.77 Aligned_cols=154 Identities=16% Similarity=0.153 Sum_probs=106.3
Q ss_pred CCCEEEEEcCC---CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~~---g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
+++.+|+++.. +.|..+|++||+++=+..++...-..++ ...++.++.++..++.+..+|++|++++=+.+...+.
T Consensus 51 ~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGi-t~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG 129 (262)
T 3nol_A 51 RNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGI-SDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG 129 (262)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEE-EEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC
T ss_pred ECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEE-EEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc
Confidence 36799999865 4899999999999999988654211244 2345555554555789999999999999999886532
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCccee---eeEEEEeecCCeEEEEEecCCceeEE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE---VQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~---~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
. .+.. + ++.+++. .+++|+.+|++|++++=+......... +-.+- ..++.+|+...... .+
T Consensus 130 ~----glt~-----d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe--~~~G~lyan~w~~~---~I 194 (262)
T 3nol_A 130 W----GLTH-----N-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE--WVDGEIFANVWQTN---KI 194 (262)
T ss_dssp C----CEEE-----C-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE--EETTEEEEEETTSS---EE
T ss_pred e----EEec-----C-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE--EECCEEEEEEccCC---eE
Confidence 2 2221 2 3456665 367899999999998877665421110 11121 24789997665444 69
Q ss_pred EEEECCCCceeeeeeee
Q 002016 205 YQINAMNGELLNHETAA 221 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~ 221 (981)
+.+|++||+++-...++
T Consensus 195 ~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLN 211 (262)
T ss_dssp EEECTTTCBEEEEEECT
T ss_pred EEEECCCCcEEEEEECC
Confidence 99999999998766543
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.024 Score=62.45 Aligned_cols=190 Identities=11% Similarity=0.131 Sum_probs=108.8
Q ss_pred CCC-EEEEEcCCCEEEEEEC----CCCccceEEEcC----C-----------CcceeeeeeeecCeEEEEEccCCEEEEE
Q 002016 52 GRK-RVVVSTEENVIASLDL----RHGEIFWRHVLG----I-----------NDVVDGIDIALGKYVITLSSDGSTLRAW 111 (981)
Q Consensus 52 ~~~-~VyvaT~~g~L~ALd~----~tG~ivWR~~l~----~-----------~~~i~~l~~~~~~~vV~Vs~~g~~V~A~ 111 (981)
++. .+++++.+|.|...|. .+|+.+|+.... . ...+..+....++..++.++.++.|+.|
T Consensus 56 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 135 (425)
T 1r5m_A 56 LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLW 135 (425)
T ss_dssp SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 355 7999999999999999 999987765321 1 1123233222244555556666799999
Q ss_pred eCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCccee------------
Q 002016 112 NLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE------------ 178 (981)
Q Consensus 112 da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~------------ 178 (981)
| .+|+.++......... ..+.+. ..+..++.. .+|.+..+|..+|+.............
T Consensus 136 ~-~~~~~~~~~~~~~~~v-~~~~~~------~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (425)
T 1r5m_A 136 N-KTGALLNVLNFHRAPI-VSVKWN------KDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGS 207 (425)
T ss_dssp E-TTSCEEEEECCCCSCE-EEEEEC------TTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CC
T ss_pred e-CCCCeeeeccCCCccE-EEEEEC------CCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcc
Confidence 9 7899999887654332 122222 123445554 489999999999999988866543200
Q ss_pred -eeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecC
Q 002016 179 -VQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 179 -~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
...+. ...++.+++.+..| .+..+|..+|+.+...... ...+. .+.+. .+..+++.. .++.+++.++.++
T Consensus 208 ~~~~~~-~~~~~~~~~~~~~g----~i~~~d~~~~~~~~~~~~~-~~~i~-~~~~~~~~~~l~~~~-~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 208 LGVDVE-WVDDDKFVIPGPKG----AIFVYQITEKTPTGKLIGH-HGPIS-VLEFNDTNKLLLSAS-DDGTLRIWHGGNG 279 (425)
T ss_dssp CBSCCE-EEETTEEEEECGGG----CEEEEETTCSSCSEEECCC-SSCEE-EEEEETTTTEEEEEE-TTSCEEEECSSSB
T ss_pred eeeEEE-EcCCCEEEEEcCCC----eEEEEEcCCCceeeeeccC-CCceE-EEEECCCCCEEEEEc-CCCEEEEEECCCC
Confidence 11111 12345554443333 4888999999887665311 11111 12222 334555554 4678888888876
Q ss_pred e
Q 002016 257 K 257 (981)
Q Consensus 257 ~ 257 (981)
+
T Consensus 280 ~ 280 (425)
T 1r5m_A 280 N 280 (425)
T ss_dssp S
T ss_pred c
Confidence 6
No 46
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.80 E-value=0.018 Score=61.94 Aligned_cols=219 Identities=8% Similarity=0.062 Sum_probs=114.8
Q ss_pred cccccccccEeEEEeccCceeeeeeeecccCCCEEEEEcC-CCEEEEEECCCCcc-ceEEEcCCCcceeeeeeeecCeEE
Q 002016 22 SLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-ENVIASLDLRHGEI-FWRHVLGINDVVDGIDIALGKYVI 99 (981)
Q Consensus 22 AlyedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~-~g~L~ALd~~tG~i-vWR~~l~~~~~i~~l~~~~~~~vV 99 (981)
.+++.+.|+.......-+.+....|. .+++.+|+++. ++.|..+|+++|++ ......... ...++....++..+
T Consensus 23 ~~~d~~~~~~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l 98 (331)
T 3u4y_A 23 SFFSTDTLEILNQITLGYDFVDTAIT---SDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS-SMADVDITPDDQFA 98 (331)
T ss_dssp EEEETTTCCEEEEEECCCCEEEEEEC---SSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS-CCCCEEECTTSSEE
T ss_pred EEEeCcccceeeeEEccCCcceEEEc---CCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC-CccceEECCCCCEE
Confidence 34555556655554431111122232 24556888877 78999999999998 554443332 11113222344455
Q ss_pred EEEccC-C--EEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-e-CCE-EEEEECCCCcEeEEEe--
Q 002016 100 TLSSDG-S--TLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-S-KGC-LHAVSSIDGEILWTRD-- 171 (981)
Q Consensus 100 ~Vs~~g-~--~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~-~g~-l~aLd~~tG~~~W~~~-- 171 (981)
+++..+ + .|+.||..+|+.+.......... .+.+- ..++.+++. . ++. +..++...+..+....
T Consensus 99 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~--~~~~s------pdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 99 VTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAV--GIAIS------PNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp EECCCSSSSCEEEEEETTTTEEEEEEECCTTEE--EEEEC------TTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred EEecCCCCcccEEEEECCCCCeEEEEECCCCcc--ceEEC------CCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 554433 3 99999999999988766543221 11111 113345554 2 355 6655554433222211
Q ss_pred ccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCce---eeeeeeeccCCccCceEEE-cCcEEEEEECCCCe
Q 002016 172 FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL---LNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSI 247 (981)
Q Consensus 172 ~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~---lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~ 247 (981)
.......+..+..+.++..+|+.+..++ .+..+|+.+|+. +.... ...... .+.+- .+..++..+...+.
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~---~v~v~d~~~~~~~~~~~~~~--~~~~~~-~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGN---SIGILETQNPENITLLNAVG--TNNLPG-TIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTT---EEEEEECSSTTSCEEEEEEE--CSSCCC-CEEECTTSSEEEEECSSEEE
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCC---eEEEEECCCCcccceeeecc--CCCCCc-eEEECCCCCEEEEEEcCCCE
Confidence 0011112334433334555777664443 588899999998 54432 221111 22222 23445555555567
Q ss_pred EEEEEeecCee
Q 002016 248 LVTVSFKNRKI 258 (981)
Q Consensus 248 L~v~~L~sg~~ 258 (981)
+.+.++.++++
T Consensus 245 i~~~d~~~~~~ 255 (331)
T 3u4y_A 245 VFNFNQLSGTL 255 (331)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCce
Confidence 88888888873
No 47
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.76 E-value=0.069 Score=57.27 Aligned_cols=192 Identities=12% Similarity=0.100 Sum_probs=111.4
Q ss_pred CCEEEEE-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEE-EccCCEEEEEeCCCCcE-eEEEeccCccc
Q 002016 53 RKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQM-VWESFLRGSKH 129 (981)
Q Consensus 53 ~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~V-s~~g~~V~A~da~tG~l-lWe~~~~~~~~ 129 (981)
++++|++ +.++.|..+|+++|++..+....... . .+....++..+++ +..++.|+.||..+|++ ...........
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDF-V-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCE-E-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCc-c-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 5666665 46789999999999998888765432 2 3322233444444 44467999999999998 65555443322
Q ss_pred cCCceeecccccccCCcEEEEEe-C-C--EEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSS-K-G--CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~-~-g--~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~ 205 (981)
....+- ..+..+++.. + + .+..+|..+|+.+........ +..+..+.++..+|+.+..++..+.++
T Consensus 87 -~~~~~s------~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 87 -ADVDIT------PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD---AVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp -CCEEEC------TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT---EEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred -cceEEC------CCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC---ccceEECCCCCEEEEEecCCCceEEEE
Confidence 102222 1244566543 3 3 999999999998887765432 223332334446887666543225555
Q ss_pred EEECCCCceeeeeeeeccCCccC-ceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 206 QINAMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 206 aLd~~tG~~lw~~~v~~p~~~~~-~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.++ .+|..........+.+... .+.+- .+..+++.+...+.+++.++.+++
T Consensus 157 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 157 KID-ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EEC-TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred EEC-CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 555 3444433211111111111 12222 334566666667889999998877
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.74 E-value=0.027 Score=62.62 Aligned_cols=152 Identities=11% Similarity=-0.009 Sum_probs=94.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeee-eeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGID-IALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~-~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
++..+++++.+|.+...|..+++........ . +.... ...++..++.++.++.++.||..+|+............
T Consensus 67 ~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~-~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v- 142 (420)
T 3vl1_A 67 VGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--D-YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEI- 142 (420)
T ss_dssp EETTEEEEEETTEEEEEECCSEETTTTSCSC--C-EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCE-
T ss_pred cCCeEEEEEcCCcEEEEEecccceeeEEecC--C-ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCcc-
Confidence 3566999999999999999998775443222 1 11111 12344455556667799999999999876644333222
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
..+.+.| .+..++.. .||.+..+|..+|+...+........ ..+.....+..++..+.+| .+...|.
T Consensus 143 ~~~~~~~------~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~d~----~v~iwd~ 210 (420)
T 3vl1_A 143 TKLKFFP------SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV--TDIAIIDRGRNVLSASLDG----TIRLWEC 210 (420)
T ss_dssp EEEEECT------TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE--EEEEEETTTTEEEEEETTS----CEEEEET
T ss_pred EEEEECC------CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE--EEEEEcCCCCEEEEEcCCC----cEEEeEC
Confidence 1222221 23344444 48999999999999888776443332 2232233445555544444 4888899
Q ss_pred CCCceeeeee
Q 002016 210 MNGELLNHET 219 (981)
Q Consensus 210 ~tG~~lw~~~ 219 (981)
.+|+.+....
T Consensus 211 ~~~~~~~~~~ 220 (420)
T 3vl1_A 211 GTGTTIHTFN 220 (420)
T ss_dssp TTTEEEEEEC
T ss_pred CCCceeEEee
Confidence 9999887764
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.73 E-value=0.011 Score=67.08 Aligned_cols=184 Identities=13% Similarity=0.078 Sum_probs=116.6
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|..+|+..+...-.. ..+..+ ..++..++.++.++.|+.||..+|+.+..........
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-- 216 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT-GSVLCL--QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV-- 216 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCS-SCEEEE--ECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE--
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC-CcEEEE--EECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE--
Confidence 46789999999999999999999988765332 234444 2355566666667899999999999998887554322
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEec-cCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF-AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~-~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
..+. -.++.++.. .+|.+...|..+|+....... .........+ ...++.++..+.+| .+...|.
T Consensus 217 --~~l~-----~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~s~~~dg----~i~vwd~ 283 (435)
T 1p22_A 217 --LHLR-----FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV--DFDDKYIVSASGDR----TIKVWNT 283 (435)
T ss_dssp --EEEE-----CCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE--EEETTEEEEEETTS----EEEEEET
T ss_pred --EEEE-----EcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE--EeCCCEEEEEeCCC----eEEEEEC
Confidence 1111 124445554 489999999999886542211 1111111122 12455555544444 5888999
Q ss_pred CCCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 210 MNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 210 ~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+|+.+....... ..+ .++...++.+++.. .+|.+++-++.++.
T Consensus 284 ~~~~~~~~~~~~~-~~v--~~~~~~~~~l~~g~-~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 284 STCEFVRTLNGHK-RGI--ACLQYRDRLVVSGS-SDNTIRLWDIECGA 327 (435)
T ss_dssp TTCCEEEEEECCS-SCE--EEEEEETTEEEEEE-TTSCEEEEETTTCC
T ss_pred CcCcEEEEEcCCC-CcE--EEEEeCCCEEEEEe-CCCeEEEEECCCCC
Confidence 9999887663211 111 12223556666665 46889999998876
No 50
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.73 E-value=0.044 Score=62.21 Aligned_cols=188 Identities=11% Similarity=-0.022 Sum_probs=117.5
Q ss_pred cccCCCEEEEEcC-----CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc----------cCCEEEEEeC
Q 002016 49 QKTGRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNL 113 (981)
Q Consensus 49 ~~~~~~~VyvaT~-----~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~----------~g~~V~A~da 113 (981)
|..+++++||++. .|.|..||++|++++++....... ++...-++..+||+. .++.|..||+
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P---~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP---NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC---cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 3456889999987 589999999999999998876542 232233455666654 2357999999
Q ss_pred CCCcEeEEEeccCcc------ccCCceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEE
Q 002016 114 PDGQMVWESFLRGSK------HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQ 184 (981)
Q Consensus 114 ~tG~llWe~~~~~~~------~s~~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~ 184 (981)
.|++++-+..+..+. .+....+- ..++.++|.. ++.|..+|.++++++-+.+.+... .+.
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~s------pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~----~~~- 185 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLT------PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCY----HIF- 185 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEEC------TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE----EEE-
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEc------CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcc----eee-
Confidence 999999988775311 10111111 2356788863 589999999999999888765421 111
Q ss_pred eecCCeEEEEEecCCceeEEEEEECCC-CceeeeeeeeccCCccC-----ceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 185 LDESDQIYVVGYAGSSQFHAYQINAMN-GELLNHETAAFSGGFVG-----DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 185 s~~~~~Vyvvg~~g~~~~~v~aLd~~t-G~~lw~~~v~~p~~~~~-----~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
......++.++.+| ++..++..+ |++.-... ....... ...++ .++.++++. +.|.++++|+.++.
T Consensus 186 P~g~~~~~~~~~DG----~~~~v~~~~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~dG~~~~vs-~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 186 PTAPDTFFMHCRDG----SLAKVAFGTEGTPEITHT--EVFHPEDEFLINHPAYSQKAGRLVWPT-YTGKIHQIDLSSGD 258 (386)
T ss_dssp EEETTEEEEEETTS----CEEEEECCSSSCCEEEEC--CCCSCTTSCBCSCCEEETTTTEEEEEB-TTSEEEEEECTTSS
T ss_pred cCCCceeEEECCCC----CEEEEECCCCCeEEEeec--ceeccccccccccceeEcCCCcEEEEe-CCCEEEEEECCCCc
Confidence 12344455555555 366677765 77642221 1111111 12233 344555554 46899999987765
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.72 E-value=0.07 Score=56.96 Aligned_cols=190 Identities=13% Similarity=0.085 Sum_probs=113.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.+|.|.-.|..+|+..-...-.. ..+..+.....+..++.++.++.++.||..+|+.+-......... .
T Consensus 34 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-~ 111 (312)
T 4ery_A 34 NGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-F 111 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEeeCCCeEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCE-E
Confidence 46679999999999999999998665433221 223333222234455556667899999999999988776554332 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+. ..+..++.. .+|.+..+|..+|+............ ..+.....+..++..+.+| .+...|..
T Consensus 112 ~~~~~------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~----~i~~wd~~ 179 (312)
T 4ery_A 112 CCNFN------PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV--SAVHFNRDGSLIVSSSYDG----LCRIWDTA 179 (312)
T ss_dssp EEEEC------SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----CEEEEETT
T ss_pred EEEEc------CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE--EEEEEcCCCCEEEEEeCCC----cEEEEECC
Confidence 11121 123344444 48999999999999888776543332 1222122344444433334 47888999
Q ss_pred CCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+..........+. .+.+- .+..+++.. .++.+++-++.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVS-FVKFSPNGKYILAAT-LDNTLKLWDYSKGK 225 (312)
T ss_dssp TCCEEEEECCSSCCCEE-EEEECTTSSEEEEEE-TTTEEEEEETTTTE
T ss_pred CCceeeEEeccCCCceE-EEEECCCCCEEEEEc-CCCeEEEEECCCCc
Confidence 99877554211111111 11111 334555554 46889999998876
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.71 E-value=0.049 Score=60.86 Aligned_cols=188 Identities=10% Similarity=-0.008 Sum_probs=114.9
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~ 132 (981)
++.+++++.+|.|.-.|..+|+............+..+...-++..+++++.++.++.||..+|+.+.+........
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v--- 179 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARV--- 179 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE---
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCce---
Confidence 45689999999999999999999888777544334444222344566666667799999999999998887544332
Q ss_pred ceeecccccccCCcEEEEE-eCCEEEEEECC-CCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 133 LLLVPTNLKVDKDSLILVS-SKGCLHAVSSI-DGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 133 ~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~-tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
..+. -.+..++.. .+|.+..+|.. .+............. ..+.....+..++..+..| .+...|..
T Consensus 180 -~~~~-----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~d~----~v~iwd~~ 247 (401)
T 4aez_A 180 -GCLS-----WNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEV--CGLAWRSDGLQLASGGNDN----VVQIWDAR 247 (401)
T ss_dssp -EEEE-----EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEEEEEETTS----CEEEEETT
T ss_pred -EEEE-----ECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCe--eEEEEcCCCCEEEEEeCCC----eEEEccCC
Confidence 1110 123444444 49999999998 455566655433322 2222122333444433334 48888999
Q ss_pred CCceeeeeeeeccCCccCceEEE--cCcEEEEEE-CCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALV--SSDTLVTLD-TTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d-~~~g~L~v~~L~sg~ 257 (981)
+|+.+....-. ...+. .+.+. +...+++.. ..++.+++.++.++.
T Consensus 248 ~~~~~~~~~~~-~~~v~-~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 248 SSIPKFTKTNH-NAAVK-AVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp CSSEEEEECCC-SSCCC-EEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCccEEecCC-cceEE-EEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 99888765311 11111 12221 234555442 246889999988876
No 53
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.70 E-value=0.1 Score=62.21 Aligned_cols=220 Identities=11% Similarity=0.018 Sum_probs=116.6
Q ss_pred ccccccccEeEEEeccCceeeeeeeecccCCCEEEEEcCCCEEEEEECC--CCccceEEEcCCCcceeeeeee----ecC
Q 002016 23 LYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLR--HGEIFWRHVLGINDVVDGIDIA----LGK 96 (981)
Q Consensus 23 lyedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~--tG~ivWR~~l~~~~~i~~l~~~----~~~ 96 (981)
+++.+.++...+...-..+....| +.+++.+|+++++|.|..+|.. +++++.+...... ..++... -++
T Consensus 181 viD~~t~~v~~~i~~g~~p~~v~~---SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~--P~~ia~s~~~~pDG 255 (567)
T 1qks_A 181 LIDGSTYEIKTVLDTGYAVHISRL---SASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE--ARSIETSKMEGWED 255 (567)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEE---CTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE--EEEEEECCSTTCTT
T ss_pred EEECCCCeEEEEEeCCCCccceEE---CCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC--CceeEEccccCCCC
Confidence 344455555555543112222222 3457789999999999999996 9999988776443 2233222 144
Q ss_pred eEEEEEc-cCCEEEEEeCCCCcEeEEEeccCcccc------CC--ceeecccccccCCcEEEE-E-eCCEEEEEECCCCc
Q 002016 97 YVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHS------KP--LLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGE 165 (981)
Q Consensus 97 ~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~~s------~~--~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~ 165 (981)
..++++. .++.+..+|..|++++....+.+.... .+ ..++.+ ..+...++ . ..|.+..+|..+.+
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s----~~~~~~vv~~~~~g~v~~vd~~~~~ 331 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS----HYRPEFIVNVKETGKILLVDYTDLN 331 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC----SSSSEEEEEETTTTEEEEEETTCSS
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc----CCCCEEEEEecCCCeEEEEecCCCc
Confidence 5666654 468999999999999999886532110 00 011100 11122222 2 36777777776654
Q ss_pred EeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeee-ec-cCCccCceEEEc-CcEEEEE-
Q 002016 166 ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETA-AF-SGGFVGDVALVS-SDTLVTL- 241 (981)
Q Consensus 166 ~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v-~~-p~~~~~~~~~vg-~~~lv~~- 241 (981)
.+=....+.+.. +.......++..+|+.....+ +|..+|.++|++++...+ .. |....+.-++-. .+.+.++
T Consensus 332 ~~~v~~i~~~~~-~~d~~~~pdgr~~~va~~~sn---~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 332 NLKTTEISAERF-LHDGGLDGSHRYFITAANARN---KLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATS 407 (567)
T ss_dssp EEEEEEEECCSS-EEEEEECTTSCEEEEEEGGGT---EEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEE
T ss_pred cceeeeeecccc-ccCceECCCCCEEEEEeCCCC---eEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeC
Confidence 221111111111 111111223445555443332 588899999999887765 22 322122112221 2233222
Q ss_pred ECCCCeEEEEEeec
Q 002016 242 DTTRSILVTVSFKN 255 (981)
Q Consensus 242 d~~~g~L~v~~L~s 255 (981)
....+.+.+++..+
T Consensus 408 ~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 408 HMGDDSVALIGTDP 421 (567)
T ss_dssp BSSSSEEEEEECCT
T ss_pred CCCCCeEEEecCCC
Confidence 22346777777766
No 54
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.69 E-value=0.0055 Score=66.05 Aligned_cols=139 Identities=9% Similarity=0.004 Sum_probs=80.0
Q ss_pred cccccccccEeEEEeccC--ceeeeeeeecccCCCEEEEEc-CCCEEEEEECCCCccceEEEcCCC-----cceeeeeee
Q 002016 22 SLYEDQVGLMDWHQQYIG--KVKHAVFHTQKTGRKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-----DVVDGIDIA 93 (981)
Q Consensus 22 AlyedqvG~~dW~~~~vG--~~~~~~f~~~~~~~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~-----~~i~~l~~~ 93 (981)
.+++-+.|+..++...-+ .+....|. .+++.+|+++ .++.|..+|+++|+.+++..+... ..+.++...
T Consensus 24 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s---~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~s 100 (349)
T 1jmx_B 24 HVVDVASDTVYKSCVMPDKFGPGTAMMA---PDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAIS 100 (349)
T ss_dssp EEEETTTTEEEEEEECSSCCSSCEEEEC---TTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEEC
T ss_pred EEEECCCCcEEEEEecCCCCCCceeEEC---CCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEEC
Confidence 344445566655554422 23333332 2355677765 578999999999999999887542 112223122
Q ss_pred ecCeEEEEEcc------------CCEEEEEeCCCCcEe---EEEeccCccccCCceeecccccccCCcEEEEEeCCEEEE
Q 002016 94 LGKYVITLSSD------------GSTLRAWNLPDGQMV---WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHA 158 (981)
Q Consensus 94 ~~~~vV~Vs~~------------g~~V~A~da~tG~ll---We~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~a 158 (981)
.++..++++.. ++.++.||..+|+.. ......... ....+ ..++.+++ .++.++.
T Consensus 101 pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~-------s~dg~l~~-~~~~i~~ 170 (349)
T 1jmx_B 101 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV--YLMRA-------ADDGSLYV-AGPDIYK 170 (349)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC--CCEEE-------CTTSCEEE-ESSSEEE
T ss_pred CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc--cceeE-------CCCCcEEE-ccCcEEE
Confidence 23445555542 379999999996543 222222111 11111 12333555 4455999
Q ss_pred EECCCCcEeEEEecc
Q 002016 159 VSSIDGEILWTRDFA 173 (981)
Q Consensus 159 Ld~~tG~~~W~~~~~ 173 (981)
+|.++|+..+.....
T Consensus 171 ~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 171 MDVKTGKYTVALPLR 185 (349)
T ss_dssp ECTTTCCEEEEECST
T ss_pred EeCCCCceecccccc
Confidence 999999998877543
No 55
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.67 E-value=0.0023 Score=71.07 Aligned_cols=192 Identities=8% Similarity=0.106 Sum_probs=111.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcC---CCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLG---INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~---~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++++++++.+|.|.-.|.++|+........ ..+.+..+...-++..++.++.++.|+.||..+|+.+-.........
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 578999999999999999999988765532 12234444222244455546667799999999999998877554332
Q ss_pred cCCceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
....+.+ + +..+++ . .||.+...|..+|+..-+............+.....++.+++.|...+ .+...
T Consensus 173 -~~~~~~~-----~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg---~v~~w 242 (344)
T 4gqb_B 173 -TCVAASP-----H-KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG---TVSLV 242 (344)
T ss_dssp -EEEEECS-----S-CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS---EEEEE
T ss_pred -EEEEecC-----C-CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC---cEEEE
Confidence 1111111 1 223444 3 489999999999988766543322221222322234556666554433 57888
Q ss_pred ECCCCceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|..+|+.+.+..... ..+. .+.+- |..+++... .++.+++-|+.+++
T Consensus 243 d~~~~~~~~~~~~h~-~~v~-~v~fsp~g~~~lasgs-~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 243 DTKSTSCVLSSAVHS-QCVT-GLVFSPHSVPFLASLS-EDCSLAVLDSSLSE 291 (344)
T ss_dssp ESCC--CCEEEECCS-SCEE-EEEECSSSSCCEEEEE-TTSCEEEECTTCCE
T ss_pred ECCCCcEEEEEcCCC-CCEE-EEEEccCCCeEEEEEe-CCCeEEEEECCCCc
Confidence 999999887653211 1111 12221 223455444 45778887777765
No 56
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.66 E-value=0.067 Score=61.54 Aligned_cols=189 Identities=12% Similarity=0.020 Sum_probs=115.3
Q ss_pred ccCCCEEEEEcCC-----CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc----------cCCEEEEEeCC
Q 002016 50 KTGRKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLP 114 (981)
Q Consensus 50 ~~~~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~----------~g~~V~A~da~ 114 (981)
..+.+++||++.. |.|..+|++|++++++..+.... ++...-++..++|+. .++.|..+|..
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P---gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP---HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC---ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 3457789999874 69999999999999999886642 342334555666654 24589999999
Q ss_pred CCcEeEEEeccCcc------ccCCceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEe
Q 002016 115 DGQMVWESFLRGSK------HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQL 185 (981)
Q Consensus 115 tG~llWe~~~~~~~------~s~~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s 185 (981)
+++++-+..+.++. .+....+- ..++.+||.. ++.|..+|.++++++-+...+... .+.
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~s------pDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~----~~~-- 225 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALT------PDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCY----HIF-- 225 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEEC------TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE----EEE--
T ss_pred CCcEEEEEECCCccccccCCCcceEEEc------CCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCce----eec--
Confidence 99999988875110 00111111 2355788853 579999999999999988765321 111
Q ss_pred ecCCeEEEEEecCCceeEEEEEECCCCceeeeee--eeccC-CccCceEEEc-CcEEEEEECCCCeEEEEEeecCe
Q 002016 186 DESDQIYVVGYAGSSQFHAYQINAMNGELLNHET--AAFSG-GFVGDVALVS-SDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 186 ~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~--v~~p~-~~~~~~~~vg-~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+...|+.....+ ++..+|..+|++.+... +.... .+.....+.. +..++.. ...+.++++|+.++.
T Consensus 226 p~g~~~~v~~~~dG---~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~-s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 226 PASPTVFYMNCRDG---SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP-TYTGKIFQADLTAEG 297 (426)
T ss_dssp EEETTEEEEEETTS---SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE-BTTSEEEEEEECSSC
T ss_pred cCCCcEEEEEcCCC---CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE-eCCCcEEEEeccCCc
Confidence 12234444322222 36777778888876432 11100 0001111221 2233333 356889999987765
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.64 E-value=0.077 Score=56.39 Aligned_cols=188 Identities=9% Similarity=0.111 Sum_probs=106.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEc----CCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEec--c
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVL----GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL--R 125 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l----~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~--~ 125 (981)
++..+++++ +|.|.-.|..+++..-.... .....+..+....++..++.++.++.++.||..+++....... .
T Consensus 62 ~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 140 (337)
T 1gxr_A 62 PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS 140 (337)
T ss_dssp SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS
T ss_pred CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC
Confidence 345566666 99999999998864332211 1222233332222444555566667999999999984443333 2
Q ss_pred CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
.... ....+. ..+..+++. .+|.+..+|..+|+............ ..+.....+..++..+..| .+
T Consensus 141 ~~~i-~~~~~~------~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~~dg----~i 207 (337)
T 1gxr_A 141 APAC-YALAIS------PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA--SCIDISNDGTKLWTGGLDN----TV 207 (337)
T ss_dssp SSCE-EEEEEC------TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----EE
T ss_pred CCce-EEEEEC------CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce--EEEEECCCCCEEEEEecCC----cE
Confidence 2211 111111 123445554 48999999999999988876543332 2222223444555444333 58
Q ss_pred EEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 205 YQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|..+|+.+..... +..+.. +.+. .+..+++.. .++.+++.++.++.
T Consensus 208 ~~~d~~~~~~~~~~~~--~~~v~~-~~~s~~~~~l~~~~-~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 208 RSWDLREGRQLQQHDF--TSQIFS-LGYCPTGEWLAVGM-ESSNVEVLHVNKPD 257 (337)
T ss_dssp EEEETTTTEEEEEEEC--SSCEEE-EEECTTSSEEEEEE-TTSCEEEEETTSSC
T ss_pred EEEECCCCceEeeecC--CCceEE-EEECCCCCEEEEEc-CCCcEEEEECCCCC
Confidence 8899999998877632 222211 2221 334555554 46788888888776
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.63 E-value=0.054 Score=61.37 Aligned_cols=185 Identities=11% Similarity=0.048 Sum_probs=114.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC----------------------cceeeeeeeecCeEEEEEccCCEEE
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN----------------------DVVDGIDIALGKYVITLSSDGSTLR 109 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~----------------------~~i~~l~~~~~~~vV~Vs~~g~~V~ 109 (981)
.+..+++++.+|.|...|.++++.......... ..+..+ ...+..++.++.++.++
T Consensus 216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLI 293 (464)
T ss_dssp SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEE
T ss_pred CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEE
Confidence 346699999999999999999987765332211 111122 23344555566677999
Q ss_pred EEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecC
Q 002016 110 AWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDES 188 (981)
Q Consensus 110 A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~ 188 (981)
.||..+|+.+.......... ....+. ..+..++.. .||.+..+|..+|+.+.+........ ..+ ...+
T Consensus 294 vwd~~~~~~~~~~~~~~~~v-~~~~~~------~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v--~~~--~~~~ 362 (464)
T 3v7d_B 294 VWDVAQMKCLYILSGHTDRI-YSTIYD------HERKRCISASMDTTIRIWDLENGELMYTLQGHTALV--GLL--RLSD 362 (464)
T ss_dssp EEETTTTEEEEEECCCSSCE-EEEEEE------TTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEE--EECS
T ss_pred EEECCCCcEEEEecCCCCCE-EEEEEc------CCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE--EEE--EEcC
Confidence 99999999999887554332 122222 123455555 48999999999999999886544332 122 1245
Q ss_pred CeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 189 DQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 189 ~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..++..+.+| .+...|+.+++..+.... .......++...+..+++.. .|.+++-++++|+
T Consensus 363 ~~l~s~s~dg----~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 363 KFLVSAAADG----SIRGWDANDYSRKFSYHH--TNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGK 423 (464)
T ss_dssp SEEEEEETTS----EEEEEETTTCCEEEEEEC--TTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCC
T ss_pred CEEEEEeCCC----cEEEEECCCCceeeeecC--CCCccEEEEEeCCCEEEEec--CCeEEEEECCCCc
Confidence 5555544444 588899999987766531 11111112223555666665 5789999999887
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.63 E-value=0.0076 Score=67.34 Aligned_cols=195 Identities=10% Similarity=0.097 Sum_probs=115.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCcc-------ceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEe
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEI-------FWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~i-------vWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~ 123 (981)
++..+++++.+|.|.-.|..+|+. +....-.. ..+..+... .++.+++.++.++.|+.||..+|+.+....
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 171 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT-KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG 171 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS-SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC-CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe
Confidence 466799999999999999999943 33332211 223333111 233456656667899999999999988873
Q ss_pred --ccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe-ccCcceeeeEEEEeecCCeEEEEEecCC
Q 002016 124 --LRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD-FAAESVEVQQVIQLDESDQIYVVGYAGS 199 (981)
Q Consensus 124 --~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~-~~~~~~~~~~vv~s~~~~~Vyvvg~~g~ 199 (981)
...... ..+.+. ..+..+++. .+|.+..+|..+|+...+.. ..... .+..+.. ..++.+++.|+.++
T Consensus 172 ~~~~~~~v-~~~~~~------~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 172 PDVHPDTI-YSVDWS------RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT-RPVHAVF-VSEGKILTTGFSRM 242 (402)
T ss_dssp TTTCCSCE-EEEEEC------TTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS-SCCEEEE-CSTTEEEEEEECTT
T ss_pred cCCCCCce-EEEEEC------CCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC-cceEEEE-cCCCcEEEEeccCC
Confidence 332221 111121 123345554 59999999999999998873 32222 1222322 24566776675433
Q ss_pred ceeEEEEEECCCCce-eeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 200 SQFHAYQINAMNGEL-LNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 200 ~~~~v~aLd~~tG~~-lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+..+..+|..+++. +....+.....+.. +.+- .+..+++....++.+++.++.+++
T Consensus 243 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 243 SERQVALWDTKHLEEPLSLQELDTSSGVLL-PFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CCEEEEEEETTBCSSCSEEEECCCCSSCEE-EEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCceEEEEcCccccCCceEEeccCCCceeE-EEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 445788999998875 33332222222221 2222 344565555456889999998876
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.1 Score=56.13 Aligned_cols=190 Identities=9% Similarity=0.014 Sum_probs=107.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|..+|+.+.+..-... .+..+....++..++.++.++.|+.||..+|+.+.......+..
T Consensus 43 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-- 119 (369)
T 3zwl_B 43 EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-- 119 (369)
T ss_dssp TSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE--
T ss_pred CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE--
Confidence 466799999999999999999998887653322 23333222234455556667799999999999999988544332
Q ss_pred CceeecccccccCCcEEEEE-eC-----CEEEEEECCCCcEeEEEeccC--cce---------eeeEEEEeecCCeEEEE
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SK-----GCLHAVSSIDGEILWTRDFAA--ESV---------EVQQVIQLDESDQIYVV 194 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~-----g~l~aLd~~tG~~~W~~~~~~--~~~---------~~~~vv~s~~~~~Vyvv 194 (981)
...+. ..+..+++. .+ |.+..+|..++.......... ... ....+.....+..+++.
T Consensus 120 ~~~~~------~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 120 RVEFS------PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp EEEEC------TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred EEEEc------cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 22222 123344444 35 888888887775433222211 100 11111112233444443
Q ss_pred EecCCceeEEEEEECCC-CceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 195 GYAGSSQFHAYQINAMN-GELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 195 g~~g~~~~~v~aLd~~t-G~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+..| .+..+|..+ ++.+...... ...+. .+.+. .+..+++.. .++.+++.++.+++
T Consensus 194 ~~dg----~i~i~d~~~~~~~~~~~~~~-~~~v~-~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 194 HKDG----KISKYDVSNNYEYVDSIDLH-EKSIS-DMQFSPDLTYFITSS-RDTNSFLVDVSTLQ 251 (369)
T ss_dssp ETTS----EEEEEETTTTTEEEEEEECC-SSCEE-EEEECTTSSEEEEEE-TTSEEEEEETTTCC
T ss_pred cCCC----EEEEEECCCCcEeEEEEecC-CCcee-EEEECCCCCEEEEec-CCceEEEEECCCCc
Confidence 3333 588889988 5655544221 11111 12221 334555554 45788888888776
No 61
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.54 E-value=0.068 Score=58.13 Aligned_cols=189 Identities=11% Similarity=0.086 Sum_probs=114.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
....++.++.++.|.-.|.++|+.+........ .+..+....++..++.++.++.++.||..+|+..+......... .
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v-~ 168 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV-DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI-L 168 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTT-CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCE-E
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceE-E
Confidence 355688899999999999999998877655432 12222122344455557777899999999999999877654332 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+- ..+..++.. .+|.+..+|..+|+.+-+........ ..+..+. ++..++.+...+ .+...|..
T Consensus 169 ~~~~s------pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~sp-d~~~l~s~s~dg---~i~iwd~~ 236 (321)
T 3ow8_A 169 SIAYS------PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI--RSLTFSP-DSQLLVTASDDG---YIKIYDVQ 236 (321)
T ss_dssp EEEEC------TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC--CEEEECT-TSCEEEEECTTS---CEEEEETT
T ss_pred EEEEC------CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce--eEEEEcC-CCCEEEEEcCCC---eEEEEECC
Confidence 11121 123444444 49999999999999888776433322 1222122 334444343322 47778999
Q ss_pred CCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+....-.. ..+. .+.+- .+..++... .++.+++-++.+++
T Consensus 237 ~~~~~~~~~~h~-~~v~-~~~~sp~~~~l~s~s-~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 237 HANLAGTLSGHA-SWVL-NVAFCPDDTHFVSSS-SDKSVKVWDVGTRT 281 (321)
T ss_dssp TCCEEEEECCCS-SCEE-EEEECTTSSEEEEEE-TTSCEEEEETTTTE
T ss_pred CcceeEEEcCCC-CceE-EEEECCCCCEEEEEe-CCCcEEEEeCCCCE
Confidence 888765432110 1111 11221 334555554 45788888888876
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.53 E-value=0.015 Score=62.17 Aligned_cols=192 Identities=14% Similarity=0.101 Sum_probs=113.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|.-.|.++|+.+-+..-... .+..+.....+..++.++.++.++.||..+|+.+.......... .
T Consensus 76 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~ 153 (312)
T 4ery_A 76 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-S 153 (312)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-E
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE-E
Confidence 467799999999999999999998766543322 23333122234455556667799999999999988776554322 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+- ..+..++.. .+|.+..+|..+|+.+-+........ ...+.....+..++..+..| .+...|..
T Consensus 154 ~~~~~------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~----~i~iwd~~ 222 (312)
T 4ery_A 154 AVHFN------RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-VSFVKFSPNGKYILAATLDN----TLKLWDYS 222 (312)
T ss_dssp EEEEC------TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCC-EEEEEECTTSSEEEEEETTT----EEEEEETT
T ss_pred EEEEc------CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCc-eEEEEECCCCCEEEEEcCCC----eEEEEECC
Confidence 11111 123344444 49999999999999877664332211 11122122344444433333 58888999
Q ss_pred CCceeeeeeeeccCCccCceEE-E-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVAL-V-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~-v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+............-...+ . ++..+++.. .++.+++-++.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 223 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS-EDNLVYIWNLQTKE 270 (312)
T ss_dssp TTEEEEEECSSCCSSSCCCEEEECSSSCEEEECC-TTSCEEEEETTTCC
T ss_pred CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEEC-CCCEEEEEECCCch
Confidence 9988766532221111111111 1 233444443 46788888888776
No 63
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.53 E-value=0.012 Score=63.51 Aligned_cols=152 Identities=11% Similarity=0.113 Sum_probs=91.8
Q ss_pred CCEEE-EEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEE-EccCCEEEEEeCCCCcEeEEEeccCc---
Q 002016 53 RKRVV-VSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRGS--- 127 (981)
Q Consensus 53 ~~~Vy-vaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~V-s~~g~~V~A~da~tG~llWe~~~~~~--- 127 (981)
++.+| +++.++.|..+|+++|+.+++..++.......+....++..+++ +..++.|+.||..+|+.+++......
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 44544 55678999999999999999988765111222212223344444 44567999999999999999886431
Q ss_pred --cccCCceeecccccccCCcEEEEEe-------------CCEEEEEECCCCcE---eEEEeccCcceeeeEEEEeecCC
Q 002016 128 --KHSKPLLLVPTNLKVDKDSLILVSS-------------KGCLHAVSSIDGEI---LWTRDFAAESVEVQQVIQLDESD 189 (981)
Q Consensus 128 --~~s~~~~~v~~~~~~~~~~~V~V~~-------------~g~l~aLd~~tG~~---~W~~~~~~~~~~~~~vv~s~~~~ 189 (981)
.......+- ..++.+++.. ++.+..+|.++|+. ......+.. +..+..+ .++
T Consensus 90 ~~~~~~~~~~s------pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~s-~dg 159 (349)
T 1jmx_B 90 VGRSMYSFAIS------PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ---VYLMRAA-DDG 159 (349)
T ss_dssp EEECSSCEEEC------TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS---CCCEEEC-TTS
T ss_pred ccccccceEEC------CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc---ccceeEC-CCC
Confidence 000112221 1244566653 48999999998654 233333321 1122112 344
Q ss_pred eEEEEEecCCceeEEEEEECCCCceeeeeee
Q 002016 190 QIYVVGYAGSSQFHAYQINAMNGELLNHETA 220 (981)
Q Consensus 190 ~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v 220 (981)
.+|+. .+ .+..+|+.+|+.++....
T Consensus 160 ~l~~~--~~----~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 160 SLYVA--GP----DIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp CEEEE--SS----SEEEECTTTCCEEEEECS
T ss_pred cEEEc--cC----cEEEEeCCCCceeccccc
Confidence 47762 22 288899999998876543
No 64
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.53 E-value=0.037 Score=58.43 Aligned_cols=154 Identities=14% Similarity=0.173 Sum_probs=92.3
Q ss_pred CCCEEEEEcC--CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTE--ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~--~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
.++.+|+++. ++.|..+| .+|+.+++..........++. ...++.++++ ..++.|+.||+ +|+.++........
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVT-VDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHL 163 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEE-ECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTC
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEE-EeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCcc
Confidence 4678999985 78999999 689988776443221222331 2223334444 44579999995 68888877543211
Q ss_pred ccCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
. .+..+. .+.++.+++.. ++.|+.+|. +|+.++++........|..+. ...++.+|+....++ ..+..
T Consensus 164 ~-~p~~i~-----~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~-~d~~G~l~v~~~~~~--~~i~~ 233 (286)
T 1q7f_A 164 E-FPNGVV-----VNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVG-INSNGEILIADNHNN--FNLTI 233 (286)
T ss_dssp S-SEEEEE-----ECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEE-ECTTCCEEEEECSSS--CEEEE
T ss_pred C-CcEEEE-----ECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEE-ECCCCCEEEEeCCCC--EEEEE
Confidence 1 111111 13355677763 789999996 788877775432111244443 234668888664331 14777
Q ss_pred EECCCCceeeeee
Q 002016 207 INAMNGELLNHET 219 (981)
Q Consensus 207 Ld~~tG~~lw~~~ 219 (981)
+|. +|+.++...
T Consensus 234 ~~~-~g~~~~~~~ 245 (286)
T 1q7f_A 234 FTQ-DGQLISALE 245 (286)
T ss_dssp ECT-TSCEEEEEE
T ss_pred ECC-CCCEEEEEc
Confidence 884 688776664
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.52 E-value=0.079 Score=64.60 Aligned_cols=192 Identities=9% Similarity=-0.026 Sum_probs=114.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.+|.|.-.|..+|+.+.+...... .+..+....++..+++++.++.++.||..+|+.+.+........ .
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-~ 101 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI-R 101 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCE-E
Confidence 467799999999999999999998888764332 34333222344455556667899999999999999887654332 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCc-EeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGE-ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~-~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
...+. ..+..++.. .+|.+...|..+|. ..-......... ..+..+..++..++.+...+ .+...|.
T Consensus 102 ~~~~s------~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~l~~~~~dg---~v~vwd~ 170 (814)
T 3mkq_A 102 SIAVH------PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV--MCVAFNPKDPSTFASGCLDR---TVKVWSL 170 (814)
T ss_dssp EEEEC------SSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE--EEEEEETTEEEEEEEEETTS---EEEEEET
T ss_pred EEEEe------CCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE--EEEEEEcCCCCEEEEEeCCC---eEEEEEC
Confidence 22222 113344444 48999999988873 333332222221 22221221344444444333 5888899
Q ss_pred CCCceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 210 MNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 210 ~tG~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+|+............+..-.... .+..+++.. .++.+.+-++.+++
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKS 219 (814)
T ss_dssp TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC-TTSEEEEEETTTTE
T ss_pred CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc
Confidence 988887766433222222111111 334555554 56888888888876
No 66
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.52 E-value=0.069 Score=57.30 Aligned_cols=199 Identities=12% Similarity=0.030 Sum_probs=113.4
Q ss_pred eeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeE
Q 002016 41 VKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVW 120 (981)
Q Consensus 41 ~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llW 120 (981)
+....|+ .++..+++++.+|.|.-.|.++|+.+........ .+..+.....+..++.++.++.++.||..+|+.+.
T Consensus 16 V~~~~fs---p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 16 VKGIDFH---PTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp EEEEEEC---SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred eEEEEEC---CCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 3344455 2466799999999999999999998877654433 23322222344455556667899999999999998
Q ss_pred EEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEE-EeccCcceeeeEEEEeecCCeEEEEEecC
Q 002016 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWT-RDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 121 e~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~-~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g 198 (981)
+........ ....+-| .+..++.. .||.+...|..+|...-. ....... ...+.....++..++.|...
T Consensus 92 ~~~~h~~~v-~~~~~~~------~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 92 DFEAHPDYI-RSIAVHP------TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF--VMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp EEECCSSCE-EEEEECS------SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC--EEEEEECTTCTTEEEEEETT
T ss_pred EEeCCCCcE-EEEEEcC------CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc--EEEEEECCCCCCEEEEEeCC
Confidence 887665433 1222221 13344444 489999999888854432 2211111 11222122233444444333
Q ss_pred CceeEEEEEECCCCceeeeeeeeccCCccCceEEE---cCcEEEEEECCCCeEEEEEeecCe
Q 002016 199 SSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV---SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 199 ~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v---g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+ .+...|..++.............+.. +.+. .+..++... .++.+++-++.+++
T Consensus 163 ~---~v~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~l~s~s-~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 163 R---TVKVWSLGQSTPNFTLTTGQERGVNY-VDYYPLPDKPYMITAS-DDLTIKIWDYQTKS 219 (304)
T ss_dssp S---EEEEEETTCSSCSEEEECCCTTCEEE-EEECCSTTCCEEEEEE-TTSEEEEEETTTTE
T ss_pred C---eEEEEECCCCCccceeccCCcCcEEE-EEEEEcCCCCEEEEEc-CCCeEEEEeCCCCc
Confidence 2 57778888877655442221111111 1111 223555554 46788888888876
No 67
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.47 E-value=0.077 Score=55.92 Aligned_cols=151 Identities=15% Similarity=0.186 Sum_probs=89.3
Q ss_pred CCEEEEE-cCCCEEEEEECCCCccceEEEcCCC-----cceeeeeeeecCeEEEEEc-c-CCEEEEEeCCCCcEeEEEec
Q 002016 53 RKRVVVS-TEENVIASLDLRHGEIFWRHVLGIN-----DVVDGIDIALGKYVITLSS-D-GSTLRAWNLPDGQMVWESFL 124 (981)
Q Consensus 53 ~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~-----~~i~~l~~~~~~~vV~Vs~-~-g~~V~A~da~tG~llWe~~~ 124 (981)
++.+|++ +.++.|..+|++ |+.+++...... ....++.....++.++++. . ++.|+.|| .+|+.++....
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~ 117 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGA 117 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECT
T ss_pred CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecC
Confidence 5678888 567899999986 888777643211 0122331112345555554 2 57999999 68999887754
Q ss_pred cCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCcee
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQF 202 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~ 202 (981)
..... +..+. .+.++.+++. .++.|+.+|. +|+..+.+........+..+. ...++.+|+.....+
T Consensus 118 ~~~~~--~~~i~-----~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~-~~~~g~l~v~~~~~~--- 185 (286)
T 1q7f_A 118 TILQH--PRGVT-----VDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVV-VNDKQEIFISDNRAH--- 185 (286)
T ss_dssp TTCSC--EEEEE-----ECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEE-ECSSSEEEEEEGGGT---
T ss_pred ccCCC--ceEEE-----EeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEE-ECCCCCEEEEECCCC---
Confidence 32111 11111 1234456775 3789999994 688888775432212244443 234577888654332
Q ss_pred EEEEEECCCCceeeee
Q 002016 203 HAYQINAMNGELLNHE 218 (981)
Q Consensus 203 ~v~aLd~~tG~~lw~~ 218 (981)
.+..+|. +|+.+++.
T Consensus 186 ~i~~~~~-~g~~~~~~ 200 (286)
T 1q7f_A 186 CVKVFNY-EGQYLRQI 200 (286)
T ss_dssp EEEEEET-TCCEEEEE
T ss_pred EEEEEcC-CCCEEEEE
Confidence 5888897 67766654
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.026 Score=62.21 Aligned_cols=187 Identities=12% Similarity=0.086 Sum_probs=114.4
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcc---
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK--- 128 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~--- 128 (981)
+++.+++++.+|.|...| .+|+.+++..-... .+..+.....+..++.++.++.++.||..+|+.+.........
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALLNVLNFHRA-PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCS-CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCc-cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 466799999999999999 78888877653322 2333322223445554555679999999999999988776442
Q ss_pred ------------ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEE
Q 002016 129 ------------HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (981)
Q Consensus 129 ------------~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg 195 (981)
. ....+. .++.+++. .+|.++.+|..+|+............ ..+.....+..++..+
T Consensus 197 ~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 197 INAENHSGDGSLG-VDVEWV-------DDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPI--SVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ---------CCCB-SCCEEE-------ETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCE--EEEEEETTTTEEEEEE
T ss_pred eeeccccCCccee-eEEEEc-------CCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCce--EEEEECCCCCEEEEEc
Confidence 1 112221 23445554 58999999999999888876543332 2222223444444444
Q ss_pred ecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 196 YAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 196 ~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..| .+..+|..+|+.+...... ...+. .+.+..++.+++.. .++.+++.++.+++
T Consensus 267 ~d~----~i~i~d~~~~~~~~~~~~~-~~~i~-~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 267 DDG----TLRIWHGGNGNSQNCFYGH-SQSIV-SASWVGDDKVISCS-MDGSVRLWSLKQNT 321 (425)
T ss_dssp TTS----CEEEECSSSBSCSEEECCC-SSCEE-EEEEETTTEEEEEE-TTSEEEEEETTTTE
T ss_pred CCC----EEEEEECCCCccceEecCC-CccEE-EEEECCCCEEEEEe-CCCcEEEEECCCCc
Confidence 334 4888899999887665311 11111 12222334555554 56889999998876
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.44 E-value=0.019 Score=64.16 Aligned_cols=191 Identities=13% Similarity=0.065 Sum_probs=100.5
Q ss_pred CEEEEEcCCCEEEEEECCC-CccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCC
Q 002016 54 KRVVVSTEENVIASLDLRH-GEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~t-G~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~ 132 (981)
+.+++++.+|.|...|.++ +..+....- ....+..+.....+..++.++.++.|+.||..+|+.++......... ..
T Consensus 187 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v-~~ 264 (401)
T 4aez_A 187 HVLSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV-KA 264 (401)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC-CE
T ss_pred CEEEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE-EE
Confidence 3455555555555555552 222222211 11122222112244456656667899999999999999886554332 22
Q ss_pred ceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 133 LLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 133 ~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
..+.| .+...++..+ +|.+..+|..+|+...+....... ..+..+..+..+++.+ |..+..+..+|.
T Consensus 265 ~~~~p-----~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~~~~--g~~dg~i~v~~~ 334 (401)
T 4aez_A 265 VAWCP-----WQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV---TSLIWSPHSKEIMSTH--GFPDNNLSIWSY 334 (401)
T ss_dssp EEECT-----TSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCE---EEEEECSSSSEEEEEE--CTTTCEEEEEEE
T ss_pred EEECC-----CCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE---EEEEECCCCCeEEEEe--ecCCCcEEEEec
Confidence 22221 1223333333 899999999999999988654332 2232223444444332 211235777888
Q ss_pred CCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 210 MNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 210 ~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+|+......+......-..+.+. .+..+++.. .+|.+++-++.+++
T Consensus 335 ~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~-~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 335 SSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA-SDENLKFWRVYDGD 382 (401)
T ss_dssp ETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC-TTSEEEEEECCC--
T ss_pred CCccceeEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECCCCc
Confidence 888766554333222111112222 334555554 56889888888876
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.44 E-value=0.2 Score=54.26 Aligned_cols=193 Identities=11% Similarity=0.186 Sum_probs=93.9
Q ss_pred EEEEEcCCC------EEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEcc--CCEEEEEeCCCCcEeEEEeccC
Q 002016 55 RVVVSTEEN------VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD--GSTLRAWNLPDGQMVWESFLRG 126 (981)
Q Consensus 55 ~VyvaT~~g------~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~--g~~V~A~da~tG~llWe~~~~~ 126 (981)
++|+++..+ .+..+|+++|+...............+...-++.+++++.. ++.|+.||..+|+..--.....
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~ 83 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA 83 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeec
Confidence 467775321 48888999998765433322211222311224444443432 4689999998887533222111
Q ss_pred cc-ccCCceeecccccccCCcEEEEEe--CCEEEEEEC-CCCcEeE--EEeccCcc-------eeeeEEEEeecCCeEEE
Q 002016 127 SK-HSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSS-IDGEILW--TRDFAAES-------VEVQQVIQLDESDQIYV 193 (981)
Q Consensus 127 ~~-~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~-~tG~~~W--~~~~~~~~-------~~~~~vv~s~~~~~Vyv 193 (981)
.. ....+.+- ..++.+++.. ++.+..++. .+|.... ........ ..+..+..+ .++.+|+
T Consensus 84 ~~~~p~~~a~s------pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~s-pdg~l~v 156 (347)
T 3hfq_A 84 PGTPPAYVAVD------EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLT-PDNRLAV 156 (347)
T ss_dssp ESCCCSEEEEE------TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEEC-TTSCEEE
T ss_pred CCCCCEEEEEC------CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEEC-CCCcEEE
Confidence 11 00111111 1244566653 688888887 4565433 22221100 012223222 3444776
Q ss_pred EEecCCceeEEEEEECC-CCceeeeeeeeccCCccC-ceEEE-cCcEEEEEECCCCeEEEEEeec--Ce
Q 002016 194 VGYAGSSQFHAYQINAM-NGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKN--RK 257 (981)
Q Consensus 194 vg~~g~~~~~v~aLd~~-tG~~lw~~~v~~p~~~~~-~~~~v-g~~~lv~~d~~~g~L~v~~L~s--g~ 257 (981)
.+..++ .+..+|+. +|+......+..+.+... .+.+- .+..+++.+...+.+.+.++.. |+
T Consensus 157 ~~~~~~---~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 157 IDLGSD---KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA 222 (347)
T ss_dssp EETTTT---EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred EeCCCC---EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 554333 46666666 676554333333221111 12222 3345666666677888888774 55
No 71
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.43 E-value=0.0089 Score=64.47 Aligned_cols=153 Identities=10% Similarity=0.055 Sum_probs=102.6
Q ss_pred cCeEEEEEcc---CCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEE
Q 002016 95 GKYVITLSSD---GSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWT 169 (981)
Q Consensus 95 ~~~vV~Vs~~---g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~ 169 (981)
.++.+++++. ++.|+.+|.++|+++-+..+..... +..+. ..++.+++.. ++.+..+|.++++++-+
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f--geGi~------~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF--GEGLT------LLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC--EEEEE------EETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc--eEEEE------EeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 3367877642 4799999999999999888755332 11111 1245788874 89999999999999999
Q ss_pred Eecc-CcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeecc-CCcc--CceEEEcCcEEEEEECCC
Q 002016 170 RDFA-AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGFV--GDVALVSSDTLVTLDTTR 245 (981)
Q Consensus 170 ~~~~-~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p-~~~~--~~~~~vg~~~lv~~d~~~ 245 (981)
.+.+ ... ..+ +.+++.+|+. . |+ -++..+|++|.+.+....+... ..+. ....++ ++.+++.....
T Consensus 102 i~~g~~~g---~gl--t~Dg~~l~vs-~-gs--~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 102 FTHQMKDG---WGL--ATDGKILYGS-D-GT--SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp EECCSSSC---CEE--EECSSSEEEE-C-SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EECCCCCe---EEE--EECCCEEEEE-C-CC--CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 8765 221 123 3467788864 3 42 2699999999999888776542 1111 122333 44555555456
Q ss_pred CeEEEEEeecCeeeEEEEeec
Q 002016 246 SILVTVSFKNRKIAFQETHLS 266 (981)
Q Consensus 246 g~L~v~~L~sg~~~~~~~~l~ 266 (981)
+.+.++|..+|++ ...+++.
T Consensus 172 ~~V~vID~~tg~V-~~~I~~~ 191 (266)
T 2iwa_A 172 DCIARISAKDGTL-LGWILLP 191 (266)
T ss_dssp SEEEEEETTTCCE-EEEEECH
T ss_pred CeEEEEECCCCcE-EEEEECC
Confidence 7899999999984 5666664
No 72
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.43 E-value=0.015 Score=63.97 Aligned_cols=154 Identities=11% Similarity=0.105 Sum_probs=96.2
Q ss_pred CCCE-EEEEcCCCEEEEEECCC------Cccce-----EEEc-----CC-CcceeeeeeeecCeEEEEEccCCEEEEEeC
Q 002016 52 GRKR-VVVSTEENVIASLDLRH------GEIFW-----RHVL-----GI-NDVVDGIDIALGKYVITLSSDGSTLRAWNL 113 (981)
Q Consensus 52 ~~~~-VyvaT~~g~L~ALd~~t------G~ivW-----R~~l-----~~-~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da 113 (981)
+++. +++++.+|.|...|.++ ++.+. +... .. ...+..+.....+ .+++++.++.++.||.
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL 214 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEET
T ss_pred CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEEC
Confidence 4667 88999999999999999 77765 4421 11 1123333222234 6665777789999999
Q ss_pred CCCcEeEEEec---c---CccccCCceeecccccccCCcEEEEE-eC---CEEEEEECCCCcEeEEEec-----------
Q 002016 114 PDGQMVWESFL---R---GSKHSKPLLLVPTNLKVDKDSLILVS-SK---GCLHAVSSIDGEILWTRDF----------- 172 (981)
Q Consensus 114 ~tG~llWe~~~---~---~~~~s~~~~~v~~~~~~~~~~~V~V~-~~---g~l~aLd~~tG~~~W~~~~----------- 172 (981)
.+|+.++.... . .... ..+.+. ..+..+++. .+ |.+..+|..+|+.+.+...
T Consensus 215 ~~~~~~~~~~~~~~h~~~~~~i-~~i~~~------~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 215 STLRPLYNFESQHSMINNSNSI-RSVKFS------PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp TTTEEEEEEECCC---CCCCCE-EEEEEC------SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CC
T ss_pred CCCceeEEEeccccccccCCcc-ceEEEC------CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccc
Confidence 99999999887 3 2222 122222 124445554 47 8999999999999988875
Q ss_pred --cCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeee
Q 002016 173 --AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHET 219 (981)
Q Consensus 173 --~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~ 219 (981)
.... +..+..+..+..++..+..| .+...|..+|+.+....
T Consensus 288 ~~~~~~--v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 288 FAHSSW--VMSLSFNDSGETLCSAGWDG----KLRFWDVKTKERITTLN 330 (397)
T ss_dssp BSBSSC--EEEEEECSSSSEEEEEETTS----EEEEEETTTTEEEEEEE
T ss_pred cccCCc--EEEEEECCCCCEEEEEeCCC----eEEEEEcCCCceeEEEe
Confidence 2222 22232223344444433333 58889999999887765
No 73
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.35 E-value=0.15 Score=55.45 Aligned_cols=145 Identities=11% Similarity=0.059 Sum_probs=82.1
Q ss_pred EEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCc--EeEEEeccCc------cccCCcee
Q 002016 64 VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQ--MVWESFLRGS------KHSKPLLL 135 (981)
Q Consensus 64 ~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~--llWe~~~~~~------~~s~~~~~ 135 (981)
.|..+|+.+|+++....-..-....++.....+.+++.....+.|+.||+ +|+ .++....... .+..+..+
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 69999999999864432111011223411223344443444579999997 566 5665532111 11011111
Q ss_pred ecccccccC-CcEEEEEe---CCEEEEEECCCCcEeEEEeccCc-------ce-eeeEEEEeecCCeEEEEEecCCceeE
Q 002016 136 VPTNLKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAE-------SV-EVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 136 v~~~~~~~~-~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~-------~~-~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
. .+. ++.++|.. ++++..+| .+|+.++.+..... .+ .|..+......+.+|+....++ +
T Consensus 149 a-----~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~---~ 219 (329)
T 3fvz_A 149 A-----VEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG---R 219 (329)
T ss_dssp E-----ECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT---E
T ss_pred E-----EeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC---E
Confidence 1 122 45677752 68999999 78999888754321 11 2444432223489998765443 6
Q ss_pred EEEEECCCCceeeee
Q 002016 204 AYQINAMNGELLNHE 218 (981)
Q Consensus 204 v~aLd~~tG~~lw~~ 218 (981)
+..+|+.+|+.+...
T Consensus 220 I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 220 IQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 889999999988765
No 74
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.34 E-value=0.0098 Score=66.27 Aligned_cols=193 Identities=11% Similarity=0.110 Sum_probs=113.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|.++|+...... .....+..+...-.+..++.++.++.|+.||..+|+.+.......... .
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v-~ 185 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV-T 185 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE-E
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE-E
Confidence 46679999999999999999998754321 112234333222244455556667899999999999988877554332 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcce-eeeEEEEe--------------------ecCC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQL--------------------DESD 189 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s--------------------~~~~ 189 (981)
.+.+.| .+..++.. .+|.+...|..+|+..+++....... ....+... ..++
T Consensus 186 ~~~~~~------~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 186 DIAIID------RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp EEEEET------TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred EEEEcC------CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 222221 23444444 48999999999999999887532111 01111000 1234
Q ss_pred eEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCc-EEEEEECCCCeEEEEEeecCe
Q 002016 190 QIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSD-TLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 190 ~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~-~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..++.+...+ .+...|+.+|+.+.+........+. .+.+- .+. .+++.. .+|.+++-++.++.
T Consensus 260 ~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~g~-~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 260 KYVIAGHVSG---VITVHNVFSKEQTIQLPSKFTCSCN-SLTVDGNNANYIYAGY-ENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEEETTS---CEEEEETTTCCEEEEECCTTSSCEE-EEEECSSCTTEEEEEE-TTSEEEEEETTCTT
T ss_pred CEEEEEcCCC---eEEEEECCCCceeEEcccccCCCce-eEEEeCCCCCEEEEEe-CCCeEEEEEcCCCc
Confidence 4444444332 4888899999887666321111111 11221 223 566655 45888888887764
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.31 E-value=0.036 Score=62.66 Aligned_cols=185 Identities=8% Similarity=0.054 Sum_probs=115.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|.++|+.+.+..-... .+..+ ...++.++.++.++.|+.||..+|+.........+.. .
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~l--~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~-~ 257 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE-AVLHL--RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-A 257 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCS-CEEEE--ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS-S
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC-cEEEE--EEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC-C
Confidence 467899999999999999999998877543222 23333 2334555556667899999999998764322211110 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
....+. -.++.+++. .+|.+..+|..+|+.+.+........ ..+ ...++.++..+.+| .+...|..
T Consensus 258 ~v~~~~-----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v--~~~--~~~~~~l~~g~~dg----~i~iwd~~ 324 (435)
T 1p22_A 258 AVNVVD-----FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACL--QYRDRLVVSGSSDN----TIRLWDIE 324 (435)
T ss_dssp CEEEEE-----EETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEE--EEETTEEEEEETTS----CEEEEETT
T ss_pred cEEEEE-----eCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcE--EEE--EeCCCEEEEEeCCC----eEEEEECC
Confidence 111110 124455555 59999999999999998887544332 122 22455555544444 48889999
Q ss_pred CCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+....... ..+ .++...+..+++.. .+|.+++-++.++.
T Consensus 325 ~~~~~~~~~~h~-~~v--~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 325 CGACLRVLEGHE-ELV--RCIRFDNKRIVSGA-YDGKIKVWDLVAAL 367 (435)
T ss_dssp TCCEEEEECCCS-SCE--EEEECCSSEEEEEE-TTSCEEEEEHHHHT
T ss_pred CCCEEEEEeCCc-CcE--EEEEecCCEEEEEe-CCCcEEEEECCCCC
Confidence 999887653211 111 12222555666665 46888888887654
No 76
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.28 E-value=0.37 Score=54.00 Aligned_cols=185 Identities=10% Similarity=-0.050 Sum_probs=107.9
Q ss_pred cCCCEEEEEcC-C-C---EEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc----------cCCEEEEEeCCC
Q 002016 51 TGRKRVVVSTE-E-N---VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLPD 115 (981)
Q Consensus 51 ~~~~~VyvaT~-~-g---~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~----------~g~~V~A~da~t 115 (981)
.+..++|+++. . + .|..+|+.+|+++=+...... . ++...-++..++++. .++.|..||..+
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~--p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL--P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC--C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 44677999986 3 3 889999999998755443322 1 332334556777764 246799999999
Q ss_pred CcEeEEEeccCc------cccCCceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEE-EeccCcceeeeEEEEe
Q 002016 116 GQMVWESFLRGS------KHSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWT-RDFAAESVEVQQVIQL 185 (981)
Q Consensus 116 G~llWe~~~~~~------~~s~~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~-~~~~~~~~~~~~vv~s 185 (981)
++++-+..+.++ ..+....+- ..++.+++.. ++.|..+| ++|+++-+ ...+.. . .+ .
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~s------pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~-~---~~--~ 173 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANT------PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC-Y---HI--H 173 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEEC------CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce-E---EE--E
Confidence 999988876511 110111111 1255788753 47899999 99999877 554322 1 11 1
Q ss_pred ecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCc-----eEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 186 DESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGD-----VALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 186 ~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~-----~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+...|+.....+ ++..+|. +|+..+........ .... ..+. .++.+++.. ..+.++++|+.++.
T Consensus 174 ~~~~~~~~~~~~dg---~~~~vd~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~ 245 (373)
T 2mad_H 174 PGAPSTFYLLCAQG---GLAKTDH-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAG 245 (373)
T ss_pred eCCCceEEEEcCCC---CEEEEEC-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCc
Confidence 23444554332222 5888999 99988654311100 1111 1111 123333333 45789999987654
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.074 Score=57.20 Aligned_cols=193 Identities=9% Similarity=0.041 Sum_probs=111.5
Q ss_pred CCCEEEEEcCC-----CEEEEEECCCCccceEEEcCCCc------------ceeeeeeeecCeEEEEEccCCEEEEEeCC
Q 002016 52 GRKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGIND------------VVDGIDIALGKYVITLSSDGSTLRAWNLP 114 (981)
Q Consensus 52 ~~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l~~~~------------~i~~l~~~~~~~vV~Vs~~g~~V~A~da~ 114 (981)
++..+++++.+ |.|...|.++++........... .+..+....++..+++++.++.|+.||..
T Consensus 126 ~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 126 CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS 205 (369)
T ss_dssp TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 46678888888 99999999888765544332211 12222112234455556667899999999
Q ss_pred C-CcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEE
Q 002016 115 D-GQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIY 192 (981)
Q Consensus 115 t-G~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vy 192 (981)
+ ++.+.......... ....+. ..+..+++. .+|.+..+|..+|+....+....+.. .+.....+..++
T Consensus 206 ~~~~~~~~~~~~~~~v-~~~~~~------~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 275 (369)
T 3zwl_B 206 NNYEYVDSIDLHEKSI-SDMQFS------PDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLN---TAVITPLKEFII 275 (369)
T ss_dssp TTTEEEEEEECCSSCE-EEEEEC------TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE---EEEECSSSSEEE
T ss_pred CCcEeEEEEecCCCce-eEEEEC------CCCCEEEEecCCceEEEEECCCCceeeeecCCCCce---eEEecCCCceEE
Confidence 9 78887777654332 122222 123345444 48999999999999999887443322 222233444444
Q ss_pred EEEecCCc----------eeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 193 VVGYAGSS----------QFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 193 vvg~~g~~----------~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+.+..++. ...+...|..+|+.+....... ..+. .+.+. .+..+++.+ .+|.+++-++.++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~-~~~~s~~~~~l~s~~-~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 276 LGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF-GPLN-TVAISPQGTSYASGG-EDGFIRLHHFEKSY 348 (369)
T ss_dssp EEECCC-------------CEEEEEETTTCCEEEEEECCS-SCEE-EEEECTTSSEEEEEE-TTSEEEEEEECHHH
T ss_pred EeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc-CcEE-EEEECCCCCEEEEEc-CCCeEEEEECcccc
Confidence 44333311 1257778888888876552111 1111 12221 334566655 45788888887654
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.25 E-value=0.22 Score=64.10 Aligned_cols=155 Identities=12% Similarity=0.057 Sum_probs=98.4
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.+|.|.-.|..+|+.+.+..-.. ..+..+....++..++.++.++.|+.||..+|+.+.......... .
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v-~ 703 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKAHE-DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQV-N 703 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEeccCC-CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE-E
Confidence 46679999999999999999999877754222 234333222344455556667899999999999999887655433 1
Q ss_pred CceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 132 PLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
...+.+ ..++.+++ . .+|.+...|..+|+...+........ ..+..+..+..++..+.+| .+...|.
T Consensus 704 ~~~~~~-----~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v--~~~~~sp~~~~l~s~s~dg----~v~vwd~ 772 (1249)
T 3sfz_A 704 CCHFTN-----KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV--NHCRFSPDDELLASCSADG----TLRLWDV 772 (1249)
T ss_dssp EEEECS-----SSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE--EEEEECSSTTEEEEEESSS----EEEEEEG
T ss_pred EEEEec-----CCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE--EEEEEecCCCEEEEEECCC----eEEEEeC
Confidence 111211 11233444 3 48999999999999888876544332 2222223444444433333 4777888
Q ss_pred CCCceeeeee
Q 002016 210 MNGELLNHET 219 (981)
Q Consensus 210 ~tG~~lw~~~ 219 (981)
.+|+......
T Consensus 773 ~~~~~~~~~~ 782 (1249)
T 3sfz_A 773 RSANERKSIN 782 (1249)
T ss_dssp GGTEEEEEEE
T ss_pred CCCcccceec
Confidence 8888765543
No 79
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.24 E-value=0.038 Score=58.65 Aligned_cols=160 Identities=9% Similarity=0.058 Sum_probs=106.2
Q ss_pred eeeeeecCeEEEEEccC---CEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe--CCEEEEEECCC
Q 002016 89 GIDIALGKYVITLSSDG---STLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSID 163 (981)
Q Consensus 89 ~l~~~~~~~vV~Vs~~g---~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~t 163 (981)
|+ ...++.+++|+.. +.|+.+|.+||+++=+..+.......+... . ++.++++. ++.++.+|++|
T Consensus 25 GL--~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~-------~-~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 25 GL--FYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA-------W-RDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp EE--EEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE-------E-TTEEEEEESSSSEEEEEETTT
T ss_pred cE--EEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE-------e-CCEEEEEEeeCCEEEEEECCc
Confidence 55 3334677776432 589999999999998888776543111111 2 56788874 89999999999
Q ss_pred CcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeecc-CCcc--CceEEEcCcEEEE
Q 002016 164 GEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGFV--GDVALVSSDTLVT 240 (981)
Q Consensus 164 G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p-~~~~--~~~~~vg~~~lv~ 240 (981)
++++=+.+.+.... .+ ..+++.+|+. +|+. ++..+|++|.+.+-...+... ..+. ...-.+++. +.+
T Consensus 95 l~~~~ti~~~~~Gw---gl--t~dg~~L~vS--dgs~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~-lya 164 (243)
T 3mbr_X 95 LTPRARFRYPGEGW---AL--TSDDSHLYMS--DGTA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGE-LLA 164 (243)
T ss_dssp TEEEEEEECSSCCC---EE--EECSSCEEEE--CSSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTE-EEE
T ss_pred CcEEEEEeCCCCce---EE--eeCCCEEEEE--CCCC--eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCE-EEE
Confidence 99999988764332 33 2456677764 3432 699999999999988776542 1111 112233443 334
Q ss_pred EECCCCeEEEEEeecCeeeEEEEeecccC
Q 002016 241 LDTTRSILVTVSFKNRKIAFQETHLSNLG 269 (981)
Q Consensus 241 ~d~~~g~L~v~~L~sg~~~~~~~~l~~l~ 269 (981)
-.-.++.+.++|.++|++ ...+.+..|.
T Consensus 165 nvw~s~~I~vIDp~tG~V-~~~idl~~l~ 192 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKV-VAWIDLQALV 192 (243)
T ss_dssp EETTTTEEEEECTTTCBE-EEEEECGGGS
T ss_pred EECCCCeEEEEECCCCCE-EEEEECCcCc
Confidence 444567899999999985 6667776554
No 80
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.20 E-value=0.011 Score=63.54 Aligned_cols=154 Identities=13% Similarity=0.053 Sum_probs=101.5
Q ss_pred cCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEe
Q 002016 95 GKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 95 ~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~ 171 (981)
.++.+++| +..+.|+.+|++||+++-+. +..... +..+. ..++.++++. ++.++.+|++|++++=+.+
T Consensus 63 ~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~F--geGit------~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 63 HQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIF--AEGLA------SDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp ETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCC--EEEEE------ECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcc--eeEEE------EeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 34566665 45568999999999999988 665433 11112 1245688874 9999999999999999988
Q ss_pred ccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeecc-CCcc--CceEEEcCcEEEEEECCCCeE
Q 002016 172 FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGFV--GDVALVSSDTLVTLDTTRSIL 248 (981)
Q Consensus 172 ~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p-~~~~--~~~~~vg~~~lv~~d~~~g~L 248 (981)
.+.... .+ ..+++.+|+.. |+ -++..+|++|++.+-...+... ..+. ...-.+++ .+.+..-.++.+
T Consensus 134 ~~~eGw---GL--t~Dg~~L~vSd--Gs--~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG-~lyanvw~s~~I 203 (268)
T 3nok_A 134 YSGEGW---GL--CYWNGKLVRSD--GG--TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANG-VIYANIWHSSDV 203 (268)
T ss_dssp CSSCCC---CE--EEETTEEEEEC--SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT-EEEEEETTCSEE
T ss_pred CCCcee---EE--ecCCCEEEEEC--CC--CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCC-EEEEEECCCCeE
Confidence 754322 23 23567777643 42 2699999999999988776542 2211 12223333 444444456789
Q ss_pred EEEEeecCeeeEEEEeeccc
Q 002016 249 VTVSFKNRKIAFQETHLSNL 268 (981)
Q Consensus 249 ~v~~L~sg~~~~~~~~l~~l 268 (981)
.++|.++|++ ...+.+..|
T Consensus 204 ~vIDp~TG~V-~~~Idl~~L 222 (268)
T 3nok_A 204 LEIDPATGTV-VGVIDASAL 222 (268)
T ss_dssp EEECTTTCBE-EEEEECHHH
T ss_pred EEEeCCCCcE-EEEEECCCC
Confidence 9999999985 565666543
No 81
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=97.20 E-value=0.011 Score=69.70 Aligned_cols=153 Identities=17% Similarity=0.324 Sum_probs=93.8
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcC----------CCcc--------eeeeeee----ecC--eEEEEEc---cC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLG----------INDV--------VDGIDIA----LGK--YVITLSS---DG 105 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~----------~~~~--------i~~l~~~----~~~--~vV~Vs~---~g 105 (981)
...||+++.+|.|+|+|+. |+++|-+.-. .+.. +++.+.. .++ ..+.+++ .|
T Consensus 85 ~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG 163 (570)
T 3hx6_A 85 APRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGG 163 (570)
T ss_dssp CCEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSC
T ss_pred ccEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCC
Confidence 3579999999999999998 9999998521 1110 1121111 222 3344443 46
Q ss_pred CEEEEEeCCC---CcEeEEEeccC-----ccccCCceeecccccccCCcEEEEEeC--------CEEEEEECCCCcEeEE
Q 002016 106 STLRAWNLPD---GQMVWESFLRG-----SKHSKPLLLVPTNLKVDKDSLILVSSK--------GCLHAVSSIDGEILWT 169 (981)
Q Consensus 106 ~~V~A~da~t---G~llWe~~~~~-----~~~s~~~~~v~~~~~~~~~~~V~V~~~--------g~l~aLd~~tG~~~W~ 169 (981)
+.++|+|..+ .+++||..... ...+.+.... ...++.++++.+ ..|+.+|+++|+.+|+
T Consensus 164 ~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~-----~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~ 238 (570)
T 3hx6_A 164 KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVAR-----LHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRK 238 (570)
T ss_dssp SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEE-----CTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEE
T ss_pred cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEE-----ecCCCEEEEEccccCCCCCccEEEEEECCCCceEEE
Confidence 7899999776 89999998332 1122222211 123456666643 3899999999999999
Q ss_pred EeccCcc-----eeeeEEEEee---cCCeEEEEEecCCceeEEEEEECCCCcee
Q 002016 170 RDFAAES-----VEVQQVIQLD---ESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 170 ~~~~~~~-----~~~~~vv~s~---~~~~Vyvvg~~g~~~~~v~aLd~~tG~~l 215 (981)
...+... +....+++.. ..+.+|+....| .|.-+|+.+...-
T Consensus 239 i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~G----nlWRfDl~~~~~~ 288 (570)
T 3hx6_A 239 LEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQG----NLWRFDLIAGKVN 288 (570)
T ss_dssp EEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTS----EEEEEECSCSSCC
T ss_pred EecCCCCccCCccccceEEecCCCCceeEEEEEeCCC----cEEEEEcCCCCcc
Confidence 8765321 1111122211 135788766555 5899999877763
No 82
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.19 E-value=0.3 Score=54.81 Aligned_cols=152 Identities=13% Similarity=0.088 Sum_probs=92.4
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.+|.|...|..+|+..-...-.. +.+..+....++..++.++.++.++.||..+|+.+-........+ .
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~-~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V-~ 196 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV-S 196 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECCCS-SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCE-E
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeccC-CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCE-E
Confidence 35678999999999999999998875543222 234333222344455556667899999999998876655443222 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+.| .++.++.. .|+.+...|..+|...-++....... ..+.. ..++..++.+...+ .+...|..
T Consensus 197 ~v~~~p------~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~-~~~g~~l~s~s~D~---~v~vwd~~ 264 (410)
T 1vyh_C 197 SVSIMP------NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV--RMVRP-NQDGTLIASCSNDQ---TVRVWVVA 264 (410)
T ss_dssp EEEECS------SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEE-CTTSSEEEEEETTS---CEEEEETT
T ss_pred EEEEeC------CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE--EEEEE-CCCCCEEEEEcCCC---eEEEEECC
Confidence 122221 23444444 49999999999999877765443332 12221 23344444443332 37777888
Q ss_pred CCceeee
Q 002016 211 NGELLNH 217 (981)
Q Consensus 211 tG~~lw~ 217 (981)
+|+..-+
T Consensus 265 ~~~~~~~ 271 (410)
T 1vyh_C 265 TKECKAE 271 (410)
T ss_dssp TCCEEEE
T ss_pred CCceeeE
Confidence 8876543
No 83
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.17 E-value=0.017 Score=62.06 Aligned_cols=155 Identities=10% Similarity=0.037 Sum_probs=102.8
Q ss_pred CeEEEEEc-cC--CEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEE
Q 002016 96 KYVITLSS-DG--STLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTR 170 (981)
Q Consensus 96 ~~vV~Vs~-~g--~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~ 170 (981)
++.+++|+ .. +.|+.+|++||+++=+..+.......+ +. ..++.++++. ++.++.+|++|++++=+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeG--it------~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEG--IS------DWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEE--EE------EETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeE--EE------EeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 45777754 32 489999999999999988765433111 11 1255788874 899999999999999998
Q ss_pred eccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeecc-CCccC--ceEEEcCcEEEEEECCCCe
Q 002016 171 DFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGFVG--DVALVSSDTLVTLDTTRSI 247 (981)
Q Consensus 171 ~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p-~~~~~--~~~~vg~~~lv~~d~~~g~ 247 (981)
+.+.... .+ ..+++.+|+. +|+ -++..+|++|++.+-...+... ..+.. ..-.++ +.+.+..-..+.
T Consensus 124 ~~~~eG~---gl--t~dg~~L~~S--dGs--~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~-G~lyan~w~~~~ 193 (262)
T 3nol_A 124 NYDGEGW---GL--THNDQYLIMS--DGT--PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVD-GEIFANVWQTNK 193 (262)
T ss_dssp ECSSCCC---CE--EECSSCEEEC--CSS--SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEET-TEEEEEETTSSE
T ss_pred ECCCCce---EE--ecCCCEEEEE--CCC--CeEEEEcCCCCeEEEEEEeccCCccccccceeEEEC-CEEEEEEccCCe
Confidence 8764322 23 2356677763 342 2689999999999988776532 11111 122343 444444445678
Q ss_pred EEEEEeecCeeeEEEEeecccC
Q 002016 248 LVTVSFKNRKIAFQETHLSNLG 269 (981)
Q Consensus 248 L~v~~L~sg~~~~~~~~l~~l~ 269 (981)
+.++|.++|++ ...+.+..|.
T Consensus 194 I~vIDp~tG~V-~~~Id~~~L~ 214 (262)
T 3nol_A 194 IVRIDPETGKV-TGIIDLNGIL 214 (262)
T ss_dssp EEEECTTTCBE-EEEEECTTGG
T ss_pred EEEEECCCCcE-EEEEECCcCc
Confidence 99999999985 5666665443
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.16 E-value=0.35 Score=51.38 Aligned_cols=188 Identities=14% Similarity=0.190 Sum_probs=94.0
Q ss_pred CCEEEEE-cCCCEEEEEECC-CCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCC--CCcEe--EEEecc
Q 002016 53 RKRVVVS-TEENVIASLDLR-HGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLP--DGQMV--WESFLR 125 (981)
Q Consensus 53 ~~~Vyva-T~~g~L~ALd~~-tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~--tG~ll--We~~~~ 125 (981)
++.+|++ +.+|.|..+|.. +|+..=...+.....+..+...-++..+++++ +++.++.|+.. +|+.. -.....
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 3467887 668999999874 56432122222222222332222344444444 44799999887 77744 233322
Q ss_pred CccccCCceeecccccccCCcEEEEEe--CCEEEEEECCCCc---EeEEEeccCcceeeeEEEEeecCCeEEEEEecCCc
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGE---ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSS 200 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~---~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~ 200 (981)
... ....+- ..+..+++.. ++.+..+|..+|. .......... +..+..+..+..+|+.+..++
T Consensus 84 ~~~--~~~~~s------~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~- 151 (343)
T 1ri6_A 84 GSL--THISTD------HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDG---CHSANISPDNRTLWVPALKQD- 151 (343)
T ss_dssp SCC--SEEEEC------TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTT---BCCCEECTTSSEEEEEEGGGT-
T ss_pred CCC--cEEEEc------CCCCEEEEEecCCCeEEEEECCCCccccccccccCCCC---ceEEEECCCCCEEEEecCCCC-
Confidence 211 111111 1244566653 7888888885443 3333322211 222322334556777653332
Q ss_pred eeEEEEEECCC-Cceeeee--eeeccCCccCc-eEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 201 QFHAYQINAMN-GELLNHE--TAAFSGGFVGD-VALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 201 ~~~v~aLd~~t-G~~lw~~--~v~~p~~~~~~-~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
.+..+|+.+ |+..... ....+.+.... +.+- .+..+++.+...+.+.+.++.
T Consensus 152 --~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 152 --RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp --EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred --EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 477788877 7654322 22222211111 2222 334566666667888888884
No 85
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.15 E-value=0.29 Score=54.92 Aligned_cols=147 Identities=11% Similarity=-0.025 Sum_probs=88.5
Q ss_pred cCCCEEEEEc----------CCCEEEEEECCCCccceEEEcCC-Cc-----ceeeeeeeecCeEEEEEc-c-CCEEEEEe
Q 002016 51 TGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGI-ND-----VVDGIDIALGKYVITLSS-D-GSTLRAWN 112 (981)
Q Consensus 51 ~~~~~VyvaT----------~~g~L~ALd~~tG~ivWR~~l~~-~~-----~i~~l~~~~~~~vV~Vs~-~-g~~V~A~d 112 (981)
.+++.+|++. .++.|..+|+++++++-+..+.. .. ....+...-++..++++. . ++.|..+|
T Consensus 75 pDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 75 HSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred CCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 4577899997 36789999999999988887751 10 011222233455666654 2 47899999
Q ss_pred CCCCcEeEE-EeccCccccCCceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEeEEEeccC--cceeee--EEEEe
Q 002016 113 LPDGQMVWE-SFLRGSKHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAA--ESVEVQ--QVIQL 185 (981)
Q Consensus 113 a~tG~llWe-~~~~~~~~s~~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~--~~~~~~--~vv~s 185 (981)
++|+++-+ ..+.... .+.+ . ++..++ . .+|++..+|. +|+..+...... ..-.+. .....
T Consensus 155 -~t~~~~~~~i~~~~~~-----~~~~-----~-~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 155 -QGGSSDDQLLSSPTCY-----HIHP-----G-APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred -CCCCEEeEEcCCCceE-----EEEe-----C-CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 99999876 5543321 1221 1 222334 3 5899999999 999987643210 000010 11112
Q ss_pred ecCCeEEEEEecCCceeEEEEEECCCCce
Q 002016 186 DESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 186 ~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
..++.+|+++..| .++.+|..++..
T Consensus 222 ~~~~~~~~~~~~~----~v~vid~~~~~~ 246 (373)
T 2mad_H 222 NKSGRIVWPVYSG----KILQADISAAGA 246 (373)
T ss_pred ecCCEEEEEcCCc----eEEEEeccCCcc
Confidence 3456666666544 588899877643
No 86
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.13 E-value=0.22 Score=54.34 Aligned_cols=195 Identities=14% Similarity=0.023 Sum_probs=113.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcC------------CCcceeeeeeee-cCeEEEEEccCCEEEEEeCCCCcE
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLG------------INDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQM 118 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~------------~~~~i~~l~~~~-~~~vV~Vs~~g~~V~A~da~tG~l 118 (981)
+++.+++++.+|.|...|..+|+........ ....+..+...- ++..++.++.++.++.||..+|+.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 4667999999999999999999988876532 111233331112 334555566677999999999999
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEec
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYA 197 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~ 197 (981)
........... ...+.+. ...+..+++. .+|.+..+|..+|+............ ..+.....+..+++.+..
T Consensus 135 ~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 135 ADVFNFEETVY--SHHMSPV---STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI--LAVSWSPRYDYILATASA 207 (408)
T ss_dssp EEEEECSSCEE--EEEECSS---CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE--EEEEECSSCTTEEEEEET
T ss_pred ceeccCCCcee--eeEeecC---CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE--EEEEECCCCCcEEEEEcC
Confidence 99988655432 1222211 1112244444 58999999999999888876543332 222222334434444443
Q ss_pred CCceeEEEEEECCCCceee-eeeee-------cc---CCccCc--eEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 198 GSSQFHAYQINAMNGELLN-HETAA-------FS---GGFVGD--VALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 198 g~~~~~v~aLd~~tG~~lw-~~~v~-------~p---~~~~~~--~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+ .+...|..+++... ..... .. ....+. ++.. .+..+++.. .++.+++-++.+++
T Consensus 208 dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 208 DS---RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNGE 278 (408)
T ss_dssp TS---CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCC
T ss_pred CC---cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCCCc
Confidence 32 47888988876322 11000 00 011111 1112 334555554 46889999998876
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.13 E-value=0.66 Score=53.90 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=76.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEc---CCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVL---GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l---~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++.+++++.+|.|...|.++|+.+.+..- .....+..+... .+..++.++.++.++.||..+|+.+..........
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 297 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 297 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc
Confidence 56789999999999999999998776521 222234444333 55566656666799999999999999988763211
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEec
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF 172 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~ 172 (981)
......+. . ..++.+++. .+|.+..+|..+|+.......
T Consensus 298 ~~~~~~~~--~--~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~ 337 (615)
T 1pgu_A 298 GNQQVGVV--A--TGNGRIISLSLDGTLNFYELGHDEVLKTISG 337 (615)
T ss_dssp GGCEEEEE--E--EETTEEEEEETTSCEEEEETTEEEEEEEECC
T ss_pred cCceeEEE--e--CCCCeEEEEECCCCEEEEECCCCcEEEEEeC
Confidence 01111110 0 124455554 589999999999888777654
No 88
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.09 E-value=0.083 Score=60.74 Aligned_cols=228 Identities=11% Similarity=-0.035 Sum_probs=124.3
Q ss_pred ccccccccEeEEEeccCceeeeeeeecccCCCEEEEEc----------CCCEEEEEECCCCccceEEEcCCC------cc
Q 002016 23 LYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGIN------DV 86 (981)
Q Consensus 23 lyedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT----------~~g~L~ALd~~tG~ivWR~~l~~~------~~ 86 (981)
+++-+.++..++...-..| ...+ +.+++++||++ ..+.|..+|++|++++-+..++.. ..
T Consensus 103 VID~~t~~vv~~I~vG~~P-gia~---SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 103 VIDGSTGRILGMTDGGFLP-HPVA---AEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEETTTTEEEEEEEECSSC-EEEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred EEECCCCEEEEEEECCCCC-ceEE---CCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCC
Confidence 3344455555655542233 2222 34577899997 468999999999999999887511 01
Q ss_pred eeeeeeeecCeEEEEEcc--CCEEEEEeCCCCcEeEEEeccCcccc--------------CCceeecc------------
Q 002016 87 VDGIDIALGKYVITLSSD--GSTLRAWNLPDGQMVWESFLRGSKHS--------------KPLLLVPT------------ 138 (981)
Q Consensus 87 i~~l~~~~~~~vV~Vs~~--g~~V~A~da~tG~llWe~~~~~~~~s--------------~~~~~v~~------------ 138 (981)
..++....++..++|+.. ++.|..+|..+++++-+..+...... ....++..
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~ 258 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEV 258 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCC
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeee
Confidence 113323345567777642 57899999999999998887432100 00000000
Q ss_pred ----------ccc-ccCCcEEEEE-eCCEEEEEECCCCcE----eEEEeccCc---ceeeeE---EEEeecCCeEEEEEe
Q 002016 139 ----------NLK-VDKDSLILVS-SKGCLHAVSSIDGEI----LWTRDFAAE---SVEVQQ---VIQLDESDQIYVVGY 196 (981)
Q Consensus 139 ----------~~~-~~~~~~V~V~-~~g~l~aLd~~tG~~----~W~~~~~~~---~~~~~~---vv~s~~~~~Vyvvg~ 196 (981)
... ...++.+++. ..|.|+.+|..++.. .|+...... ...+.. +....+++.+|+...
T Consensus 259 ~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~ 338 (426)
T 3c75_H 259 FHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVD 338 (426)
T ss_dssp CSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEE
T ss_pred eccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEec
Confidence 000 0001122222 244555555544432 132110000 001111 111335678888643
Q ss_pred cCC------ceeEEEEEECCCCceeeeeeeec-cCCccCceEEE-cCc-EEEEEECCCCeEEEEEeecCee
Q 002016 197 AGS------SQFHAYQINAMNGELLNHETAAF-SGGFVGDVALV-SSD-TLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 197 ~g~------~~~~v~aLd~~tG~~lw~~~v~~-p~~~~~~~~~v-g~~-~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
.+. ..-.|..+|+.|++++-...+.. |.++ .+- .+. .++......+.+.++|+.++++
T Consensus 339 ~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gi----a~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 339 QRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSI----NVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEE----EECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred ccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeE----EEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 211 12369999999999998776554 3322 222 334 6667765678999999999883
No 89
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.06 E-value=0.22 Score=54.30 Aligned_cols=190 Identities=12% Similarity=0.020 Sum_probs=107.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEE--EcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRH--VLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~--~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
+++.+++++.+|.+.-.|..+++...+. .+... ..+..+....++. ++.++.++.++.||..+|+.+-........
T Consensus 108 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~ 186 (340)
T 1got_B 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGD 186 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCc
Confidence 4667888999999999999887644432 22211 2233332223444 444555679999999999998777654432
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
. ....+. ..+..++.. .||.+...|..+|+..-++....... ..+.....+..++..+.+| .+...
T Consensus 187 v-~~~~~~------~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v--~~v~~~p~~~~l~s~s~d~----~v~iw 253 (340)
T 1got_B 187 V-MSLSLA------PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI--NAICFFPNGNAFATGSDDA----TCRLF 253 (340)
T ss_dssp E-EEEEEC------TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----CEEEE
T ss_pred e-EEEEEC------CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCE--EEEEEcCCCCEEEEEcCCC----cEEEE
Confidence 2 111121 113334444 49999999999999887775443332 2222223344444433333 47788
Q ss_pred ECCCCceeeeeeeecc-CCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFS-GGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p-~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|..+++.+........ ..+. .+.+- .+..+++.. .++.+++-++.++.
T Consensus 254 d~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~ 303 (340)
T 1got_B 254 DLRADQELMTYSHDNIICGIT-SVSFSKSGRLLLAGY-DDFNCNVWDALKAD 303 (340)
T ss_dssp ETTTTEEEEEECCTTCCSCEE-EEEECTTSSEEEEEE-TTSEEEEEETTTCC
T ss_pred ECCCCcEEEEEccCCcccceE-EEEECCCCCEEEEEC-CCCeEEEEEcccCc
Confidence 9999987765421110 1111 11221 234555554 45778777777665
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.04 E-value=0.48 Score=50.67 Aligned_cols=197 Identities=11% Similarity=0.126 Sum_probs=108.7
Q ss_pred CCEEE-EEcC---CCEEEEEECCCCccceEEEcCCCcceeeeeeeec---CeEEEEEccCCEEEEEeCCCCc-EeEEEec
Q 002016 53 RKRVV-VSTE---ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALG---KYVITLSSDGSTLRAWNLPDGQ-MVWESFL 124 (981)
Q Consensus 53 ~~~Vy-vaT~---~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~---~~vV~Vs~~g~~V~A~da~tG~-llWe~~~ 124 (981)
++.++ +++. +|.|.-.|..+|+.......+....+..+..... +..++.++.++.++.||..+|+ .+.....
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe
Confidence 43554 4444 8999999999998766655544333443321122 3555556667799999999998 7777765
Q ss_pred cCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCc-EeEEEeccCcc--eeeeEEEE---eecCCeEEEEEec
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGE-ILWTRDFAAES--VEVQQVIQ---LDESDQIYVVGYA 197 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~-~~W~~~~~~~~--~~~~~vv~---s~~~~~Vyvvg~~ 197 (981)
..... ......+.-.-...+..++.. .+|.+..+|..+|+ .........+. .....+.. -..++..++.+..
T Consensus 110 ~~~~v-~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 188 (357)
T 3i2n_A 110 HKEII-NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD 188 (357)
T ss_dssp CSSCE-EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET
T ss_pred cccce-EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc
Confidence 54332 111111000000123344444 48999999999997 66666543221 11112210 0123444444444
Q ss_pred CCceeEEEEEECCCCceeeeeeeeccCCccCceEEE----cCcEEEEEECCCCeEEEEEeecCe
Q 002016 198 GSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV----SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 198 g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v----g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+ .+..+|..+|+..+.... ...+.. +.+. .++.+++.. .++.+++.++.++.
T Consensus 189 d~---~i~i~d~~~~~~~~~~~~--~~~v~~-~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 189 NG---DIKLFDLRNMALRWETNI--KNGVCS-LEFDRKDISMNKLVATS-LEGKFHVFDMRTQH 245 (357)
T ss_dssp TS---EEEEEETTTTEEEEEEEC--SSCEEE-EEESCSSSSCCEEEEEE-STTEEEEEEEEEEE
T ss_pred CC---eEEEEECccCceeeecCC--CCceEE-EEcCCCCCCCCEEEEEC-CCCeEEEEeCcCCC
Confidence 32 588899999998765422 222211 1221 234555554 46889998888765
No 91
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.02 E-value=0.63 Score=51.76 Aligned_cols=191 Identities=9% Similarity=0.096 Sum_probs=103.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCc-----------------ceeeeeeeecCeEEEEEccCCEEEEEeCC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-----------------VVDGIDIALGKYVITLSSDGSTLRAWNLP 114 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~-----------------~i~~l~~~~~~~vV~Vs~~g~~V~A~da~ 114 (981)
++..+.+++ ++.+.-.|..+|+.+.+..-.... .+..+...-++..++.++.++.|+.||..
T Consensus 75 dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~ 153 (393)
T 1erj_A 75 DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 153 (393)
T ss_dssp TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 344455554 567888999999988765432110 12222112234455556667899999999
Q ss_pred CCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEE
Q 002016 115 DGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYV 193 (981)
Q Consensus 115 tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (981)
+|+.+-......... ....+.| .+..++.. .|+.+...|..+|+........... ..+.....++..++
T Consensus 154 ~~~~~~~~~~h~~~v-~~~~~~p------~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v---~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 154 NRKIVMILQGHEQDI-YSLDYFP------SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV---TTVAVSPGDGKYIA 223 (393)
T ss_dssp TTEEEEEECCCSSCE-EEEEECT------TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE---EEEEECSTTCCEEE
T ss_pred CCcEEEEEccCCCCE-EEEEEcC------CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCc---EEEEEECCCCCEEE
Confidence 999887766544322 1222221 23344444 4999999999999988877654332 12221232444444
Q ss_pred EEecCCceeEEEEEECCCCceeeeeeeecc--CCccCc---eEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 194 VGYAGSSQFHAYQINAMNGELLNHETAAFS--GGFVGD---VALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 194 vg~~g~~~~~v~aLd~~tG~~lw~~~v~~p--~~~~~~---~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+...+ .+...|..+|+.+........ .+-.+. +.+. .+..+++.. .++.+++-++.++.
T Consensus 224 ~~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 224 AGSLDR---AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-LDRSVKLWNLQNAN 289 (393)
T ss_dssp EEETTS---CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEEC----
T ss_pred EEcCCC---cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEECCCCC
Confidence 444332 477889999987755422111 111111 1221 234555554 45777777776543
No 92
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.00 E-value=0.084 Score=59.91 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=90.6
Q ss_pred cCCCEEEEEc----------CCCEEEEEECCCCccceEEEcCCCc------ceeeeeeeecCeEEEEEcc--CCEEEEEe
Q 002016 51 TGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGIND------VVDGIDIALGKYVITLSSD--GSTLRAWN 112 (981)
Q Consensus 51 ~~~~~VyvaT----------~~g~L~ALd~~tG~ivWR~~l~~~~------~i~~l~~~~~~~vV~Vs~~--g~~V~A~d 112 (981)
.+++.+|+++ ..+.|..+|++|++++-+..++.+. ...++....++..++|+.. ++.|..+|
T Consensus 87 pDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID 166 (386)
T 3sjl_D 87 DDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD 166 (386)
T ss_dssp TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEE
Confidence 4677799997 3678999999999999998875410 1112322345566777642 57999999
Q ss_pred CCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCC-CcEeEEEecc-CcceeeeE--EEEeec
Q 002016 113 LPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID-GEILWTRDFA-AESVEVQQ--VIQLDE 187 (981)
Q Consensus 113 a~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~t-G~~~W~~~~~-~~~~~~~~--vv~s~~ 187 (981)
.++++++-+..+.+... +.|. . ....+.. .||++.-++..+ |++.=+.... .....+.. ......
T Consensus 167 ~~t~~vv~tI~v~g~~~-----~~P~----g-~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 167 LEGKAFKRMLDVPDCYH-----IFPT----A-PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp TTTTEEEEEEECCSEEE-----EEEE----E-TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred CCCCcEEEEEECCCcce-----eecC----C-CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 99999998887754211 1221 1 2223333 488888888876 7763111100 00000110 110124
Q ss_pred CCeEEEEEecCCceeEEEEEECCCCce
Q 002016 188 SDQIYVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 188 ~~~Vyvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
++.+++++..| +++.+|..++.+
T Consensus 237 dG~~~~vs~~g----~V~v~d~~~~~~ 259 (386)
T 3sjl_D 237 AGRLVWPTYTG----KIHQIDLSSGDA 259 (386)
T ss_dssp TTEEEEEBTTS----EEEEEECTTSSC
T ss_pred CCcEEEEeCCC----EEEEEECCCCcc
Confidence 66666666644 699999987764
No 93
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.97 E-value=0.0046 Score=68.63 Aligned_cols=193 Identities=13% Similarity=0.181 Sum_probs=103.8
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcC---CCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLG---INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~---~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++++++++.+|.|.-.|..+|+......+. ....+..+...-++..++.++.++.|+.||..+|+.+..........
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 567889999999998899888755432221 11234333222234455546667799999999999999987654332
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
..+.+.+ ..+..++.. .||.+...|..+|+..-..........+..+.....++.+++.|...+ .+...|
T Consensus 185 -~~v~~s~-----~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd 255 (357)
T 4g56_B 185 -NCVAACP-----GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---NVSLVN 255 (357)
T ss_dssp -EEEEECT-----TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---CEEEEE
T ss_pred -EEEEEcc-----CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc---ceeEEE
Confidence 1111111 122233333 489999999999886644433222211223322234455555554432 477889
Q ss_pred CCCCceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 209 AMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|+.+....... ..+. .+.+- ++.+++... .++.+++-++.+++
T Consensus 256 ~~~~~~~~~~~~~~-~~v~-~l~~sp~~~~~lasgs-~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 256 IKNPDSAQTSAVHS-QNIT-GLAYSYHSSPFLASIS-EDCTVAVLDADFSE 303 (357)
T ss_dssp SSCGGGCEEECCCS-SCEE-EEEECSSSSCCEEEEE-TTSCEEEECTTSCE
T ss_pred CCCCcEeEEEeccc-eeEE-EEEEcCCCCCEEEEEe-CCCEEEEEECCCCc
Confidence 99998876553211 1111 12221 234555444 45778888887776
No 94
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.96 E-value=0.33 Score=53.36 Aligned_cols=192 Identities=11% Similarity=0.077 Sum_probs=104.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-----------------------------------------------
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN----------------------------------------------- 84 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~----------------------------------------------- 84 (981)
++..+++++.+|.|.-.|..+|+..-.......
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~ 154 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT 154 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC
Confidence 456788999999999999888875443332110
Q ss_pred cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCC
Q 002016 85 DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID 163 (981)
Q Consensus 85 ~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~t 163 (981)
..+..+.....+..++.++.++.++.||..+|+.+-......... ....+.+ ...+..++.. .||.+...|..+
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v-~~~~~~~----~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAP----SETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECC----CSSCCEEEEEETTSCEEEEETTT
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCe-EEEEEEe----CCCCCEEEEEeCCCeEEEEECCC
Confidence 001111011122334445556799999999999887776544322 1111111 1112344444 499999999999
Q ss_pred CcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccC--ceEEE-cCcEEEE
Q 002016 164 GEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG--DVALV-SSDTLVT 240 (981)
Q Consensus 164 G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~--~~~~v-g~~~lv~ 240 (981)
|+..-.+....... ..+.....+..++..+.+| .+...|+.+++.+..... .....+ .+.+- .+..+++
T Consensus 230 ~~~~~~~~~h~~~v--~~v~~~p~~~~l~s~s~D~----~v~lwd~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 230 GQCVQAFETHESDV--NSVRYYPSGDAFASGSDDA----TCRLYDLRADREVAIYSK--ESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp CCEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECC--TTCCSCEEEEEECTTSSEEEE
T ss_pred CcEEEEecCCCCCe--EEEEEeCCCCEEEEEeCCC----eEEEEECCCCcEEEEEcC--CCcccceeEEEEeCCCCEEEE
Confidence 99877765433322 2222223344444444334 377789888876543321 111111 11221 3345555
Q ss_pred EECCCCeEEEEEeecCe
Q 002016 241 LDTTRSILVTVSFKNRK 257 (981)
Q Consensus 241 ~d~~~g~L~v~~L~sg~ 257 (981)
.. .++.+++-++.++.
T Consensus 302 g~-~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 302 GY-NDYTINVWDVLKGS 317 (354)
T ss_dssp EE-TTSCEEEEETTTCS
T ss_pred EE-CCCcEEEEECCCCc
Confidence 54 45778888887765
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.95 E-value=0.15 Score=54.59 Aligned_cols=196 Identities=9% Similarity=0.074 Sum_probs=108.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCc-cceEEEcCCCcceeeee------eeecCeEEEEEccCCEEEEEeCCCCc-EeEEEec
Q 002016 53 RKRVVVSTEENVIASLDLRHGE-IFWRHVLGINDVVDGID------IALGKYVITLSSDGSTLRAWNLPDGQ-MVWESFL 124 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~-ivWR~~l~~~~~i~~l~------~~~~~~vV~Vs~~g~~V~A~da~tG~-llWe~~~ 124 (981)
++.+++++.+|.|...|..+|+ .+....-.. ..+..+. ...++..++.++.++.++.||..+|+ .+.....
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHK-EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCS-SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecc-cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 4679999999999999999998 665544222 2232221 01234455556667799999999997 6666654
Q ss_pred cCccccCCceeecccc-cccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEee---cCCeEEEEEecCC
Q 002016 125 RGSKHSKPLLLVPTNL-KVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLD---ESDQIYVVGYAGS 199 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~-~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~---~~~~Vyvvg~~g~ 199 (981)
...........+.... -...+..+++. .+|.+..+|..+|+..+........ ..+.... .++.+++.+..|
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~l~~~~~dg- 234 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV---CSLEFDRKDISMNKLVATSLEG- 234 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE---EEEEESCSSSSCCEEEEEESTT-
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCce---EEEEcCCCCCCCCEEEEECCCC-
Confidence 3321101111110000 00123344444 4899999999999998886654332 2232222 344444433333
Q ss_pred ceeEEEEEECCCCceeeeeeeeccCCccC---ceEEEcC-c-EEEEEECCCCeEEEEEeecCe
Q 002016 200 SQFHAYQINAMNGELLNHETAAFSGGFVG---DVALVSS-D-TLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 200 ~~~~v~aLd~~tG~~lw~~~v~~p~~~~~---~~~~vg~-~-~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+..+|..+++.+.........+-.+ .+.+..+ . .+++.. .+|.+++-++.++.
T Consensus 235 ---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 235 ---KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG-GAGGLHLWKYEYPI 293 (357)
T ss_dssp ---EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEEEECCS
T ss_pred ---eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe-CCCcEEEeecCCCc
Confidence 47778888887765553211111111 1222222 2 455554 46788888887765
No 96
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.94 E-value=0.56 Score=50.08 Aligned_cols=192 Identities=11% Similarity=0.031 Sum_probs=107.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEE-eccCcccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWES-FLRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~-~~~~~~~s 130 (981)
+++.+++++.++.|...|.++|+.+....-... .+..+.....+..++.++.++.|+-||..+|...-+. .......
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v- 143 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV- 143 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE-
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC-cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE-
Confidence 466799999999999999999998877654332 3433322233445554666789999999988554332 2222111
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEee-cCCeEEEEEecCCceeEEEEEE
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLD-ESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~-~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
....+-| ..+..++.. .||.+...|..++............. ...+.... .++..++.+-..+ .+...|
T Consensus 144 ~~v~~~p-----~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~s~D~---~i~iWd 214 (304)
T 2ynn_A 144 MCVAFNP-----KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG-VNYVDYYPLPDKPYMITASDDL---TIKIWD 214 (304)
T ss_dssp EEEEECT-----TCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTC-EEEEEECCSTTCCEEEEEETTS---EEEEEE
T ss_pred EEEEECC-----CCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCc-EEEEEEEEcCCCCEEEEEcCCC---eEEEEe
Confidence 1111111 112334444 48999999998888777665432211 11111111 1333333333322 578889
Q ss_pred CCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 209 AMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|+.+....-... .+. .+.+- .+..++... .++.+++-++.+++
T Consensus 215 ~~~~~~~~~~~~h~~-~v~-~~~~~p~~~~l~s~s-~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 215 YQTKSCVATLEGHMS-NVS-FAVFHPTLPIIISGS-EDGTLKIWNSSTYK 261 (304)
T ss_dssp TTTTEEEEEEECCSS-CEE-EEEECSSSSEEEEEE-TTSCEEEEETTTCC
T ss_pred CCCCccceeeCCCCC-CEE-EEEECCCCCEEEEEc-CCCeEEEEECCCCc
Confidence 999987765531111 111 11121 334566555 46888888888876
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.11 Score=54.50 Aligned_cols=183 Identities=13% Similarity=0.126 Sum_probs=109.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeee-cCeEEEEEccCCEEEEEeCCCCcEeEEEec-cCccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESFL-RGSKH 129 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~-~~~vV~Vs~~g~~V~A~da~tG~llWe~~~-~~~~~ 129 (981)
.++.+++++.+|.|...| +++..+....... .+..+.... .+..++.++.++.++.|| .++....... .....
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i 187 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA-SVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVV 187 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS-CEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCE
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC-ceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccE
Confidence 367899999999999999 7888877765443 222221122 445555566677999999 5666655554 22111
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
....+. .++.+++. .+|.+..+|..+|+.+.++....... ..+.. ..++.++..+..| .+...|
T Consensus 188 -~~~~~~-------~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i--~~~~~-~~~~~l~~~~~dg----~v~iwd 252 (313)
T 3odt_A 188 -RHLAVV-------DDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFV--YCIKL-LPNGDIVSCGEDR----TVRIWS 252 (313)
T ss_dssp -EEEEEE-------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEE-CTTSCEEEEETTS----EEEEEC
T ss_pred -EEEEEc-------CCCeEEEccCCCeEEEEECCchhhhhhhhcCCceE--EEEEE-ecCCCEEEEecCC----EEEEEE
Confidence 111121 13344444 59999999999999999887544332 22221 2233555444434 588899
Q ss_pred CCCCceeeeeeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 209 AMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|+.+........ .+. .+.+..++.+++.. .+|.+++-++.+++
T Consensus 253 ~~~~~~~~~~~~~~~-~i~-~~~~~~~~~~~~~~-~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 253 KENGSLKQVITLPAI-SIW-SVDCMSNGDIIVGS-SDNLVRIFSQEKSR 298 (313)
T ss_dssp TTTCCEEEEEECSSS-CEE-EEEECTTSCEEEEE-TTSCEEEEESCGGG
T ss_pred CCCCceeEEEeccCc-eEE-EEEEccCCCEEEEe-CCCcEEEEeCCCCc
Confidence 999998877632211 111 12222222344443 46889999988876
No 98
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.91 E-value=0.52 Score=49.13 Aligned_cols=183 Identities=13% Similarity=0.107 Sum_probs=98.7
Q ss_pred CCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++.+|+++. .+.|..+|+. |+.. +..++.. ....++ ....++.++++. .++.|+.+|+. |+.. +........
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i-~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~ 104 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCL-IVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDS 104 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEE-EECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTC
T ss_pred CCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeE-EECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCC
Confidence 577999884 6899999998 7654 3444332 122233 123344455544 35789999988 8764 233221111
Q ss_pred cCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
....+. .+.++.+++.. ++.|+.+|.+ |+... +..+.....+..+. ...++.+|+....++ .+..+
T Consensus 105 -~~~~i~-----~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~---~i~~~ 172 (300)
T 2qc5_A 105 -GPYGIT-----EGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPNKGSYPAFIT-LGSDNALWFTENQNN---SIGRI 172 (300)
T ss_dssp -CEEEEE-----ECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEE-ECTTSSEEEEETTTT---EEEEE
T ss_pred -CCccce-----ECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCCCCCCceeEE-ECCCCCEEEEecCCC---eEEEE
Confidence 111111 12345577753 7899999988 87762 22332222233443 234567887654333 58889
Q ss_pred ECCCCceeeeeeeeccCCccC-ceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p~~~~~-~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|. +|+... . ..+..... ..+.+ .++.+.+.+...+.+.+.+. +|.
T Consensus 173 ~~-~g~~~~-~--~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 173 TN-TGKLEE-Y--PLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp CT-TCCEEE-E--ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CC-CCcEEE-e--eCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 98 777652 2 22322222 12223 23344445555566777776 554
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.87 E-value=0.4 Score=61.69 Aligned_cols=154 Identities=12% Similarity=0.075 Sum_probs=90.9
Q ss_pred cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEecc
Q 002016 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA 173 (981)
Q Consensus 95 ~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~ 173 (981)
++..++.++.++.|+.||..+|+.+.+........ ....+. ..+..++.. .+|.+...|..+|+.+.++...
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v-~~~~~s------~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV-LCCAFS------SDDSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEEC------TTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCE-EEEEEe------cCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 34455556667799999999999998887554332 112222 123445554 4899999999999999888765
Q ss_pred CcceeeeEEEEeec-CCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEE
Q 002016 174 AESVEVQQVIQLDE-SDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTV 251 (981)
Q Consensus 174 ~~~~~~~~vv~s~~-~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~ 251 (981)
.... ..+..+.. ++.+++.+...+ .+...|..+|+.+....-. ...+. .+.+. .+..+++.. .+|.+.+-
T Consensus 699 ~~~v--~~~~~~~~~~~~~l~sg~~d~---~v~vwd~~~~~~~~~~~~h-~~~v~-~~~~sp~~~~l~s~s-~dg~v~vw 770 (1249)
T 3sfz_A 699 SEQV--NCCHFTNKSNHLLLATGSNDF---FLKLWDLNQKECRNTMFGH-TNSVN-HCRFSPDDELLASCS-ADGTLRLW 770 (1249)
T ss_dssp SSCE--EEEEECSSSSCCEEEEEETTS---CEEEEETTSSSEEEEECCC-SSCEE-EEEECSSTTEEEEEE-SSSEEEEE
T ss_pred CCcE--EEEEEecCCCceEEEEEeCCC---eEEEEECCCcchhheecCC-CCCEE-EEEEecCCCEEEEEE-CCCeEEEE
Confidence 4433 12221222 333444443332 4888899999877655311 11111 12221 344566555 45889999
Q ss_pred EeecCeeeEEEEe
Q 002016 252 SFKNRKIAFQETH 264 (981)
Q Consensus 252 ~L~sg~~~~~~~~ 264 (981)
++.++.. ...+.
T Consensus 771 d~~~~~~-~~~~~ 782 (1249)
T 3sfz_A 771 DVRSANE-RKSIN 782 (1249)
T ss_dssp EGGGTEE-EEEEE
T ss_pred eCCCCcc-cceec
Confidence 9988762 34443
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.05 Score=57.31 Aligned_cols=150 Identities=11% Similarity=0.064 Sum_probs=94.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
.++.+++++.+|.|...| .++..-.........+..+....++. ++.++.++.++.||..+|+.+.+........ .
T Consensus 154 ~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~ 229 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV-Y 229 (313)
T ss_dssp TTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE-E
Confidence 467899999999999999 45544444332222343342233444 5556667899999999999999987654432 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+. .++.++.. .+|.+..+|..+|+..+......... ..+.. ..++.+++.+.+| .+...|..
T Consensus 230 ~~~~~-------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i--~~~~~-~~~~~~~~~~~dg----~i~iw~~~ 295 (313)
T 3odt_A 230 CIKLL-------PNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISI--WSVDC-MSNGDIIVGSSDN----LVRIFSQE 295 (313)
T ss_dssp EEEEC-------TTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCE--EEEEE-CTTSCEEEEETTS----CEEEEESC
T ss_pred EEEEe-------cCCCEEEEecCCEEEEEECCCCceeEEEeccCceE--EEEEE-ccCCCEEEEeCCC----cEEEEeCC
Confidence 22222 13344444 59999999999999999887665433 22221 2344455444444 48888988
Q ss_pred CCceeeeee
Q 002016 211 NGELLNHET 219 (981)
Q Consensus 211 tG~~lw~~~ 219 (981)
+|+.+.+..
T Consensus 296 ~~~~~~~~~ 304 (313)
T 3odt_A 296 KSRWASEDE 304 (313)
T ss_dssp GGGCCC---
T ss_pred CCceeehhh
Confidence 888776653
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.84 E-value=0.96 Score=54.89 Aligned_cols=148 Identities=9% Similarity=0.000 Sum_probs=84.4
Q ss_pred cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEecc
Q 002016 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA 173 (981)
Q Consensus 95 ~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~ 173 (981)
++..+++++.++.|+.||..+|+.+.+........ ....+.| + +..+++. .+|.+..+|..+|+...+....
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v-~~~~~s~-----~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPV-RAGKFIA-----R-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEG-----G-GTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcE-EEEEEeC-----C-CCEEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence 34455556667799999999999999888654433 2222221 2 3345554 5899999999999999888654
Q ss_pred CcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEE
Q 002016 174 AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTV 251 (981)
Q Consensus 174 ~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~ 251 (981)
.... ..+..+..+..++..+..| .+...|..+|...-+....-...+. .+.+- +++.+++.. .+|.+++-
T Consensus 97 ~~~v--~~~~~s~~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~~~~-~dg~v~vw 168 (814)
T 3mkq_A 97 PDYI--RSIAVHPTKPYVLSGSDDL----TVKLWNWENNWALEQTFEGHEHFVM-CVAFNPKDPSTFASGC-LDRTVKVW 168 (814)
T ss_dssp SSCE--EEEEECSSSSEEEEEETTS----EEEEEEGGGTSEEEEEEECCSSCEE-EEEEETTEEEEEEEEE-TTSEEEEE
T ss_pred CCCE--EEEEEeCCCCEEEEEcCCC----EEEEEECCCCceEEEEEcCCCCcEE-EEEEEcCCCCEEEEEe-CCCeEEEE
Confidence 4332 2222223344444433333 4777888877333222111111111 11221 223444444 46888888
Q ss_pred EeecCe
Q 002016 252 SFKNRK 257 (981)
Q Consensus 252 ~L~sg~ 257 (981)
++.++.
T Consensus 169 d~~~~~ 174 (814)
T 3mkq_A 169 SLGQST 174 (814)
T ss_dssp ETTCSS
T ss_pred ECCCCc
Confidence 887765
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.80 E-value=0.049 Score=59.90 Aligned_cols=110 Identities=10% Similarity=0.087 Sum_probs=75.7
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEc---CC--CcceeeeeeeecCeEEEEEccC---CEEEEEeCCCCcEeEEEec--
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVL---GI--NDVVDGIDIALGKYVITLSSDG---STLRAWNLPDGQMVWESFL-- 124 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l---~~--~~~i~~l~~~~~~~vV~Vs~~g---~~V~A~da~tG~llWe~~~-- 124 (981)
.+++++.+|.|...|.++|+.+++... .. ...+..+.....+..+++++.+ +.|+.||..+|+.+.+...
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~ 278 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPT 278 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCc
Confidence 888899999999999999999998876 20 1123333222244555556555 7999999999999998875
Q ss_pred -----------cCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe
Q 002016 125 -----------RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 125 -----------~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~ 171 (981)
..... ..+.+. ..+..++.. .+|.+..+|..+|+.+.+..
T Consensus 279 ~~~~~~~~~~~~~~~v-~~~~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 279 HSSQASLGEFAHSSWV-MSLSFN------DSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp -------CCBSBSSCE-EEEEEC------SSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ccccccccccccCCcE-EEEEEC------CCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 22221 111111 123445554 49999999999999998887
No 103
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.78 E-value=0.81 Score=49.33 Aligned_cols=196 Identities=10% Similarity=0.127 Sum_probs=96.2
Q ss_pred CCEEEEEcC---CCEEEEEECCCCccceEEEcC-CCcceeeeeeeecCeEEEEEc-cCCEEEEEeC-CCCcEeEEEeccC
Q 002016 53 RKRVVVSTE---ENVIASLDLRHGEIFWRHVLG-INDVVDGIDIALGKYVITLSS-DGSTLRAWNL-PDGQMVWESFLRG 126 (981)
Q Consensus 53 ~~~VyvaT~---~g~L~ALd~~tG~ivWR~~l~-~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da-~tG~llWe~~~~~ 126 (981)
++++|+++. ++.|..+|..+|+..-...+. .......+....++..+++++ .++.++.||. .+|+...-.....
T Consensus 50 dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~ 129 (347)
T 3hfq_A 50 KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH 129 (347)
T ss_dssp TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec
Confidence 455888876 489999999888742222211 111122332223444555544 5679999998 4666544333221
Q ss_pred ccccC-------CceeecccccccCCcEEEEE--eCCEEEEEECC-CCcEeEEE--eccCcceeeeEEEEeecCCeEEEE
Q 002016 127 SKHSK-------PLLLVPTNLKVDKDSLILVS--SKGCLHAVSSI-DGEILWTR--DFAAESVEVQQVIQLDESDQIYVV 194 (981)
Q Consensus 127 ~~~s~-------~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~-tG~~~W~~--~~~~~~~~~~~vv~s~~~~~Vyvv 194 (981)
..... ....+ ....++.+++. .++.+..++.. +|+..... ....+ ..+..+..+.++..+|+.
T Consensus 130 ~~~~p~~~~~~~~~~~~----~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 130 SGHGPRPEQDGSHIHYT----DLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG-FGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp CCCCSSTTCSSCCEEEE----EECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT-CCEEEEEECTTSSEEEEE
T ss_pred CCCCCCccccCCCceEE----EECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC-CCCceEEECCCCCEEEEE
Confidence 10000 00001 00112335554 36788888877 67654322 22221 123344333344457765
Q ss_pred EecCCceeEEEEEECCCCceeeeeeeec-cCCccC-----ceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 195 GYAGSSQFHAYQINAMNGELLNHETAAF-SGGFVG-----DVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 195 g~~g~~~~~v~aLd~~tG~~lw~~~v~~-p~~~~~-----~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
+..+ ..+.++.++..+|+......+.. +.+..+ .+.+- .+..+++.+..++.+.+.++.
T Consensus 205 ~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 205 GELS-SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp ETTT-TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eCCC-CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 5433 35667777776787643333222 222111 12222 233455555556778888876
No 104
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.77 E-value=0.67 Score=48.29 Aligned_cols=183 Identities=12% Similarity=0.156 Sum_probs=97.2
Q ss_pred CCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++.+|+++. .+.|..+|+. |+.. +..+... ..+.++ ....++.++++ ..++.|+.||+. |+.. .........
T Consensus 25 ~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i-~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~ 99 (299)
T 2z2n_A 25 KGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCL-TISSDGEVWFTENAANKIGRITKK-GIIK-EYTLPNPDS 99 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEE-EECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTC
T ss_pred CCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeE-EECCCCCEEEeCCCCCeEEEECCC-CcEE-EEeCCCcCC
Confidence 667999987 6899999998 7643 2333222 122333 12234445544 435789999986 6642 222221110
Q ss_pred cCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
.+..+. .+.++.+++.. ++.++.+|. +|+.... ..+.....+..+. ...++.+|+....++ .+..+
T Consensus 100 -~~~~i~-----~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~~~~~~~~i~-~~~~g~l~v~~~~~~---~i~~~ 167 (299)
T 2z2n_A 100 -APYGIT-----EGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPNKGSYPSFIT-LGSDNALWFTENQNN---AIGRI 167 (299)
T ss_dssp -CEEEEE-----ECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEE-ECTTSCEEEEETTTT---EEEEE
T ss_pred -CceeeE-----ECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCCCCCCCceEE-EcCCCCEEEEeCCCC---EEEEE
Confidence 111111 12345577753 789999998 7876532 2221112233332 234668888664332 58899
Q ss_pred ECCCCceeeeeeeeccCCccC-ceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p~~~~~-~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|+ +|+...- ..+..... ..+.+ .++.+.+.+...+.+.+.+. ++.
T Consensus 168 ~~-~g~~~~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 168 TE-SGDITEF---KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp CT-TCCEEEE---ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred cC-CCcEEEe---eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 98 8876532 12222221 12222 23344445545567888877 665
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.76 E-value=0.24 Score=54.97 Aligned_cols=187 Identities=14% Similarity=0.112 Sum_probs=100.3
Q ss_pred EcCCCEEEEEECCCCccceE--EEcC-CCcceeeeeeee-cCeEEEEEccCCEEEEEeCCCCc-------EeEEEeccCc
Q 002016 59 STEENVIASLDLRHGEIFWR--HVLG-INDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQ-------MVWESFLRGS 127 (981)
Q Consensus 59 aT~~g~L~ALd~~tG~ivWR--~~l~-~~~~i~~l~~~~-~~~vV~Vs~~g~~V~A~da~tG~-------llWe~~~~~~ 127 (981)
++.+|.|...|..+....-+ ..+. ....+..+...- ++..++.++.++.|+.||..+|. .+........
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 57789999999754322111 0111 112233332222 45566666667899999999994 4555443332
Q ss_pred cccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe--ccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD--FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~--~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
.. ..+.+.| ++...++.. .||.+...|..+|+...+.. ..... ...+.....+..++..+.+| .+
T Consensus 133 ~v-~~~~~~p-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~----~i 200 (402)
T 2aq5_A 133 RV-GIVAWHP-----TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT--IYSVDWSRDGALICTSCRDK----RV 200 (402)
T ss_dssp CE-EEEEECS-----SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC--EEEEEECTTSSCEEEEETTS----EE
T ss_pred eE-EEEEECc-----CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc--eEEEEECCCCCEEEEEecCC----cE
Confidence 22 1111111 111344444 48999999999999988873 22222 22232223444455444333 58
Q ss_pred EEEECCCCceeeeeeeeccCCccCceEEEcCc-EEEEEE--CCCCeEEEEEeecCe
Q 002016 205 YQINAMNGELLNHETAAFSGGFVGDVALVSSD-TLVTLD--TTRSILVTVSFKNRK 257 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p~~~~~~~~~vg~~-~lv~~d--~~~g~L~v~~L~sg~ 257 (981)
...|+.+|+.+.+....-.......+.+..++ .+++.. ..++.+++.++.++.
T Consensus 201 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 201 RVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 88999999988765211111111123333334 444431 356788888887755
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.74 E-value=0.1 Score=56.00 Aligned_cols=187 Identities=11% Similarity=0.001 Sum_probs=107.4
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeee--eecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDI--ALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~--~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
+++.+++++.+|.|...|.++|+.+........ +..+.. ...+..++.++.++.++.||..+|+.+..........
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAP--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY 174 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSC--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeeccccCc--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence 466799999999999999999997765443332 433322 2344555556667899999999999999988765432
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEE-eecC----CeEEEEEecCCceeE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQ-LDES----DQIYVVGYAGSSQFH 203 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~-s~~~----~~Vyvvg~~g~~~~~ 203 (981)
.... . ...+++. .++.+..++..++...+........... .++. .... +.++..+..| .
T Consensus 175 ----~~~~-----~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dg----~ 239 (368)
T 3mmy_A 175 ----CADV-----I-YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH-RCVAIFKDKQNKPTGFALGSIEG----R 239 (368)
T ss_dssp ----EEEE-----E-TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE-EEEEEEECTTSCEEEEEEEETTS----E
T ss_pred ----EEEe-----c-CCeeEEEeCCCcEEEEEeccccchhhhccccccCCC-ceEEEcccCCCCCCeEEEecCCC----c
Confidence 1110 1 2334443 6888999999888877765443221111 1111 1111 1144333333 4
Q ss_pred EEEEECCCCce---eeeeeeeccC-----------CccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 204 AYQINAMNGEL---LNHETAAFSG-----------GFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 204 v~aLd~~tG~~---lw~~~v~~p~-----------~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+...|..++.. +......... .+. .+.+- .+..+++.. .+|.+++-++.+++
T Consensus 240 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 240 VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVN-GIAFHPVHGTLATVG-SDGRFSFWDKDART 306 (368)
T ss_dssp EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEE-EEEECTTTCCEEEEE-TTSCEEEEETTTTE
T ss_pred EEEEecCCCCccccceeeeeeecccccccccccccceE-EEEEecCCCEEEEEc-cCCeEEEEECCCCc
Confidence 77778777733 3332211110 011 11111 233555555 45788888888776
No 107
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.74 E-value=0.23 Score=51.95 Aligned_cols=182 Identities=8% Similarity=0.063 Sum_probs=94.6
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++++|+++ ..+.|..+|+ +|+... ..+... ....++ ....++.++++. .++.++.||. +|+.... .......
T Consensus 109 ~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i-~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~ 183 (299)
T 2z2n_A 109 NGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFI-TLGSDNALWFTENQNNAIGRITE-SGDITEF-KIPTPAS 183 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEE-EECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTTC
T ss_pred CCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceE-EEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-eCCCCCC
Confidence 56788886 4689999999 887642 233222 122233 123334455543 4578999999 8987642 2222111
Q ss_pred cCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
.+..+. .+.++.+++.. ++.|..+|. +|+..- +..+.....+..+. ...++.+|+....++ .+..+
T Consensus 184 -~~~~i~-----~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~---~i~~~ 251 (299)
T 2z2n_A 184 -GPVGIT-----KGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAIT-AGAGIDLWFTEWGAN---KIGRL 251 (299)
T ss_dssp -CEEEEE-----ECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEE-ECSTTCEEEEETTTT---EEEEE
T ss_pred -cceeEE-----ECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEE-ECCCCCEEEeccCCc---eEEEE
Confidence 111111 12345577764 789999999 887542 32332222244443 234567887654332 48889
Q ss_pred ECCCCceeeeeeeeccCCccC--ceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p~~~~~--~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|+ +|+.. .. ..+..... .+.+ .++.++..+. .+.+..++.++++
T Consensus 252 d~-~g~~~-~~--~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 252 TS-NNIIE-EY--PIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp ET-TTEEE-EE--ECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CC-CCceE-EE--eCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 98 67532 22 22222211 2222 3344433433 4567676666554
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.52 Score=50.74 Aligned_cols=195 Identities=15% Similarity=0.112 Sum_probs=101.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeec--CeEEEEEccCCEEEEEeCCCCc--EeEEEeccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQ--MVWESFLRG 126 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~--~~vV~Vs~~g~~V~A~da~tG~--llWe~~~~~ 126 (981)
+++.+++++.+|.|.-.|..++...-...+... ..+..+..... +..++.++.++.|+.||..+|+ .+.......
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 101 (379)
T 3jrp_A 22 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 101 (379)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCC
Confidence 466788999999999988874433333333322 23433321111 4555556666799999999997 555554333
Q ss_pred ccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcE--eEEEeccCcceeeeEEEEeec------------CCeE
Q 002016 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI--LWTRDFAAESVEVQQVIQLDE------------SDQI 191 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~--~W~~~~~~~~~~~~~vv~s~~------------~~~V 191 (981)
... ..+.+.+ ...+..+++. .+|.+..+|..++.. ........... ..+..... ++..
T Consensus 102 ~~v-~~~~~~~----~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 102 ASV-NSVQWAP----HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV--NSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp SCE-EEEEECC----GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE--EEEEECCCC----------CTTCE
T ss_pred cce-EEEEeCC----CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce--EEEEEcCccccccccccCCCCCCE
Confidence 222 1121211 0103344444 589999999988843 22222222211 12211121 2444
Q ss_pred EEEEecCCceeEEEEEECCCCceeeeeeeeccCCccC--ceEEE-c---CcEEEEEECCCCeEEEEEeecCe
Q 002016 192 YVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG--DVALV-S---SDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 192 yvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~--~~~~v-g---~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
++.+...+ .+...|..+++..+.........-.. .+.+- . +..+++.. .+|.+++-++.++.
T Consensus 175 l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 175 FVTGGADN---LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEETTS---CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-TTSCEEEEEESSTT
T ss_pred EEEEeCCC---eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCC
Confidence 44444332 37777888887665543222211111 12222 2 34566555 46888888888764
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.12 Score=56.20 Aligned_cols=157 Identities=9% Similarity=-0.014 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEe-EEEec-cCccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMV-WESFL-RGSKH 129 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~ll-We~~~-~~~~~ 129 (981)
.++.+++++.+|.|.-.|.++|+............+..+....++..++.++.++.|+.||..+|+.. -+... .....
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v 217 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI 217 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE
Confidence 46678889999999999999999855443333223333322234456665677789999999999977 55544 22221
Q ss_pred cCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccC-cceeee--EEEEeecCCeEEEEEecCCceeEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAA-ESVEVQ--QVIQLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~-~~~~~~--~vv~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
..+.+- ..+..++..+++.+...|..+++...+...-. ...... .+.. ..++..++.+..++. .+..
T Consensus 218 -~~l~fs------~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~s~~d~--~i~v 287 (343)
T 3lrv_A 218 -KEVKFA------DNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI-DDSGKNMIAYSNESN--SLTI 287 (343)
T ss_dssp -EEEEEC------TTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE-CTTSSEEEEEETTTT--EEEE
T ss_pred -EEEEEe------CCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEE-CCCCCEEEEecCCCC--cEEE
Confidence 112221 12334445567789999998887654332100 001000 1211 223444444433233 3555
Q ss_pred EECCCCceeeee
Q 002016 207 INAMNGELLNHE 218 (981)
Q Consensus 207 Ld~~tG~~lw~~ 218 (981)
++..++...|+.
T Consensus 288 ~~~~~~~~~~~~ 299 (343)
T 3lrv_A 288 YKFDKKTKNWTK 299 (343)
T ss_dssp EEECTTTCSEEE
T ss_pred EEEcccccceEe
Confidence 566677777876
No 110
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.63 E-value=0.19 Score=55.32 Aligned_cols=154 Identities=10% Similarity=0.064 Sum_probs=91.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee-e-cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-L-GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~-~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++..+++++.+|.|.-.|.++|+.+-...-... .+..+... . .+..++.++.++.|+.||..+|+.+-.........
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v 243 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDV 243 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC-CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCe
Confidence 456799999999999999999987655432222 22222111 1 23455556667899999999999887766544322
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
....+.| .+..++.. .||.+...|..+++..-.+...........+..+.. +...+.|..++ .+...|
T Consensus 244 -~~v~~~p------~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-g~~l~~g~~d~---~i~vwd 312 (354)
T 2pbi_B 244 -NSVRYYP------SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS-GRLLFAGYNDY---TINVWD 312 (354)
T ss_dssp -EEEEECT------TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT-SSEEEEEETTS---CEEEEE
T ss_pred -EEEEEeC------CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC-CCEEEEEECCC---cEEEEE
Confidence 1122211 13344444 489999999999887655543322111222222223 34444444332 478889
Q ss_pred CCCCceeee
Q 002016 209 AMNGELLNH 217 (981)
Q Consensus 209 ~~tG~~lw~ 217 (981)
..+|+.+-.
T Consensus 313 ~~~~~~~~~ 321 (354)
T 2pbi_B 313 VLKGSRVSI 321 (354)
T ss_dssp TTTCSEEEE
T ss_pred CCCCceEEE
Confidence 999987644
No 111
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.62 E-value=0.14 Score=55.05 Aligned_cols=152 Identities=10% Similarity=0.011 Sum_probs=94.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC----Ccceeeeeeeec----CeEEEEEccCCEEEEEeCCCCcEeEEEec
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI----NDVVDGIDIALG----KYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~----~~~i~~l~~~~~----~~vV~Vs~~g~~V~A~da~tG~llWe~~~ 124 (981)
+..+++++.++.|.-.|..+|+.+....-.. ...+..+..... +..++.++.++.|+.||..+|+.+.....
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC
Confidence 4568888889999999999998876654211 112332211222 34666666778999999999999998875
Q ss_pred cCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEec---cCcceeeeEEEEeecCCeEEEEEecCCc
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF---AAESVEVQQVIQLDESDQIYVVGYAGSS 200 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~---~~~~~~~~~vv~s~~~~~Vyvvg~~g~~ 200 (981)
..... ..+.+.| ..+..++.. .+|.+...|..+|+....... .... +..+.....+..++..+..|
T Consensus 114 ~~~~i-~~~~~~~-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~dg-- 183 (366)
T 3k26_A 114 HGNAI-NELKFHP-----RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE--VLSADYDLLGEKIMSCGMDH-- 183 (366)
T ss_dssp CCSCE-EEEEECS-----SCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC--EEEEEECTTSSEEEEEETTS--
T ss_pred CCCcE-EEEEECC-----CCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc--eeEEEECCCCCEEEEecCCC--
Confidence 44332 1222221 123444444 489999999999998888732 2221 22332223444555444444
Q ss_pred eeEEEEEECCCCceee
Q 002016 201 QFHAYQINAMNGELLN 216 (981)
Q Consensus 201 ~~~v~aLd~~tG~~lw 216 (981)
.+...|..+|+.+.
T Consensus 184 --~i~i~d~~~~~~~~ 197 (366)
T 3k26_A 184 --SLKLWRINSKRMMN 197 (366)
T ss_dssp --CEEEEESCSHHHHH
T ss_pred --CEEEEECCCCcccc
Confidence 48888999887653
No 112
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.61 E-value=1.3 Score=49.43 Aligned_cols=200 Identities=11% Similarity=0.063 Sum_probs=105.0
Q ss_pred CCCEEEEEcCCCEEEEEECCC---Cccc-eEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCC---CCcEeEEEec
Q 002016 52 GRKRVVVSTEENVIASLDLRH---GEIF-WRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP---DGQMVWESFL 124 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~t---G~iv-WR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~---tG~llWe~~~ 124 (981)
++..+++++.+|.|.-.|..+ |... =+..+.....+..+....++..++.++.++.|+.||.. +|+..-....
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 356799999999999999887 6511 01222222234444222344555556667899999994 7765543332
Q ss_pred c--------CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEE
Q 002016 125 R--------GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (981)
Q Consensus 125 ~--------~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg 195 (981)
. .........-+. ......+..++.. .+|.+..+|..+|+.+++.........+..+..+..+..++..+
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 233 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMR-AFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT 233 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEE-EEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE
T ss_pred ceeEEEEccCcccccCceEEE-EEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc
Confidence 1 100000000000 0000113334444 48999999999999999987631111122232222344444434
Q ss_pred ecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE----cCcEEEEEECCCCeEEEEEeecCe
Q 002016 196 YAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV----SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 196 ~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v----g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+| .+...|+.+|+.+..........+.. +.+. .++.+++.-..++.+++-++.+++
T Consensus 234 ~dg----~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 234 TRG----IIDIWDIRFNVLIRSWSFGDHAPITH-VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TTS----CEEEEETTTTEEEEEEBCTTCEEEEE-EEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CCC----eEEEEEcCCccEEEEEecCCCCceEE-EEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 334 48888999998876653221111111 1000 123233333456788888888877
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.58 E-value=0.25 Score=52.94 Aligned_cols=150 Identities=8% Similarity=-0.022 Sum_probs=91.1
Q ss_pred CEEEEEcCCCEEEEEECCC-CccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCC
Q 002016 54 KRVVVSTEENVIASLDLRH-GEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~t-G~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~ 132 (981)
+.+++++.+|.|.-.|.++ |+..-+........+..+....++..++.++.++.|+.||..+|+.+.......+.. .
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~--~ 132 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK--T 132 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE--E
T ss_pred eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE--E
Confidence 5789999999999999998 544423222222234433222244455556667899999999999887655444332 2
Q ss_pred ceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCC
Q 002016 133 LLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMN 211 (981)
Q Consensus 133 ~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~t 211 (981)
..+.+. ..+..++.. .+|.+..+|..+|+.+.......... .+ ......+++.+..+ .+..+|..+
T Consensus 133 ~~~~~~----~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~----~i~~~~~~~ 199 (368)
T 3mmy_A 133 IHWIKA----PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY---CA--DVIYPMAVVATAER----GLIVYQLEN 199 (368)
T ss_dssp EEEEEC----SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE---EE--EEETTEEEEEEGGG----CEEEEECSS
T ss_pred EEEEeC----CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce---EE--EecCCeeEEEeCCC----cEEEEEecc
Confidence 222111 113334444 49999999999999998887665322 11 12345555544444 377778877
Q ss_pred Cceeeee
Q 002016 212 GELLNHE 218 (981)
Q Consensus 212 G~~lw~~ 218 (981)
+...+..
T Consensus 200 ~~~~~~~ 206 (368)
T 3mmy_A 200 QPSEFRR 206 (368)
T ss_dssp SCEEEEE
T ss_pred ccchhhh
Confidence 7665544
No 114
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.56 E-value=0.15 Score=54.81 Aligned_cols=107 Identities=10% Similarity=0.023 Sum_probs=69.6
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeee-cCeEEEEEccCCEEEEEeCCCCcEeEEEe---ccCcc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESF---LRGSK 128 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~-~~~vV~Vs~~g~~V~A~da~tG~llWe~~---~~~~~ 128 (981)
+..+++++.+|.|...|..+|+.+....-.. ..+..+.... ++..++.++.++.|+.||..+|+.+.... .....
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHG-NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCC-SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCC-CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 3468899999999999999999988765322 2344332222 44555556667799999999999988873 22211
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEe
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEIL 167 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~ 167 (981)
. ..+.+- ..+..++.. .+|.+..+|..+|+..
T Consensus 164 v-~~~~~~------~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 164 V-LSADYD------LLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp E-EEEEEC------TTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred e-eEEEEC------CCCCEEEEecCCCCEEEEECCCCccc
Confidence 1 111111 123344444 4899999999888654
No 115
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.56 E-value=0.32 Score=50.76 Aligned_cols=183 Identities=11% Similarity=0.133 Sum_probs=96.9
Q ss_pred CCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++.+|+++. .+.|..+|+. |+.. +..+... ....++ ....++.++++. .++.|..+|+. |+.. +........
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i-~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~ 146 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGI-TEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGS 146 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEE-EECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTC
T ss_pred CCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccc-eECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCC
Confidence 567888876 6889999988 8753 3333322 122233 122234455544 35789999997 8876 233321111
Q ss_pred cCCceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
.+..+. .+.++.+++.. ++.|+.+|. +|+..- +..+.....+..+. ...++.+|+....++ .+..+
T Consensus 147 -~~~~i~-----~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~---~i~~~ 214 (300)
T 2qc5_A 147 -YPAFIT-----LGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGIT-SGNDGALWFVEIMGN---KIGRI 214 (300)
T ss_dssp -CEEEEE-----ECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEE-ECTTSSEEEEETTTT---EEEEE
T ss_pred -CceeEE-----ECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEE-ECCCCCEEEEccCCC---EEEEE
Confidence 111111 12344577764 789999998 777653 33322222244443 234678888655443 58888
Q ss_pred ECCCCceeeeeeeeccCCccC-ceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p~~~~~-~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|+ +|+..... .+..... ..+.+ .++.+.+.+..++.+...+. +|.
T Consensus 215 ~~-~g~~~~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 215 TT-TGEISEYD---IPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNT 261 (300)
T ss_dssp CT-TCCEEEEE---CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSC
T ss_pred cC-CCcEEEEE---CCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCc
Confidence 98 77755321 2222222 12222 23334445544566666665 444
No 116
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.55 E-value=0.81 Score=49.24 Aligned_cols=191 Identities=16% Similarity=0.137 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..++.++.++.|.-.|.++|+.+-+..-.. ..+..+.....+..++.++.++.++.||.. |+.+-......... .
T Consensus 76 dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v-~ 152 (319)
T 3frx_A 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHK-SDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWV-S 152 (319)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCE-E
T ss_pred CCCEEEEEeCCCEEEEEECCCCCeeEEEccCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcE-E
Confidence 46679999999999999999998765543222 223333222234455546667899999985 55554444332221 1
Q ss_pred CceeecccccccCCc-EEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 132 PLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~-~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
...+.|... ...++ .++.. .|+.+...|..+++..-++....... ..+..+..+..+...+.+| .+...|.
T Consensus 153 ~~~~~~~~~-~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~sp~g~~l~s~~~dg----~i~iwd~ 225 (319)
T 3frx_A 153 QVRVVPNEK-ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNI--NTLTASPDGTLIASAGKDG----EIMLWNL 225 (319)
T ss_dssp EEEECCC-------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCE--EEEEECTTSSEEEEEETTC----EEEEEET
T ss_pred EEEEccCCC-CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcE--EEEEEcCCCCEEEEEeCCC----eEEEEEC
Confidence 111221100 01122 23333 48999999999988776654333222 2232222333343333333 5888899
Q ss_pred CCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 210 MNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 210 ~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+++.+.+... ...+. .+.+- .+..+++.. .+.+.+.++..+.
T Consensus 226 ~~~~~~~~~~~--~~~v~-~~~~sp~~~~la~~~--~~~i~v~~~~~~~ 269 (319)
T 3frx_A 226 AAKKAMYTLSA--QDEVF-SLAFSPNRYWLAAAT--ATGIKVFSLDPQY 269 (319)
T ss_dssp TTTEEEEEEEC--CSCEE-EEEECSSSSEEEEEE--TTEEEEEEETTEE
T ss_pred CCCcEEEEecC--CCcEE-EEEEcCCCCEEEEEc--CCCcEEEEeCcCe
Confidence 99998876632 22111 12221 334555554 2356666666544
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.47 E-value=0.18 Score=55.17 Aligned_cols=195 Identities=11% Similarity=0.033 Sum_probs=104.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEe-EEEeccCcc-
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMV-WESFLRGSK- 128 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~ll-We~~~~~~~- 128 (981)
.+..+++++.+|.|...|.++|+.+....-... .+..+... .+..+++.++.++.++.||..++... .........
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccc
Confidence 344799999999999999999998877653222 23333222 23335655666789999999988733 332211100
Q ss_pred ----------ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcce--eeeEEEEe-ecCCeEEEE
Q 002016 129 ----------HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV--EVQQVIQL-DESDQIYVV 194 (981)
Q Consensus 129 ----------~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~--~~~~vv~s-~~~~~Vyvv 194 (981)
......-+.. ...+..+++. .+|.+..+|..+|+............ ........ ...+.+.+.
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCF---TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV 310 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred ceeeccccccccCceeEEEE---cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE
Confidence 0000000000 0123344444 48888899988887654432211100 00011111 123444444
Q ss_pred EecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 195 GYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 195 g~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+..| .+..+|..+|+.+....... ..+. .+.+. .+..++... .+|.+++-++.+++
T Consensus 311 ~~~~----~i~v~d~~~~~~~~~~~~~~-~~v~-~~~~s~~~~~l~s~~-~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 311 PYGS----TIAVYTVYSGEQITMLKGHY-KTVD-CCVFQSNFQELYSGS-RDCNILAWVPSLYE 367 (408)
T ss_dssp EETT----EEEEEETTTCCEEEEECCCS-SCEE-EEEEETTTTEEEEEE-TTSCEEEEEECC--
T ss_pred ecCC----EEEEEECcCCcceeeeccCC-CeEE-EEEEcCCCCEEEEEC-CCCeEEEEeCCCCC
Confidence 4433 58889999999887663111 1111 12222 334566555 46888888888765
No 118
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.45 E-value=0.27 Score=54.80 Aligned_cols=112 Identities=16% Similarity=0.179 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.+++++.+|.|...|.++|+.+-...-. ...+..+.....+..++.++.++.++.||..+|+............
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~-- 210 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVT-- 210 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE--
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcE--
Confidence 4667899999999999999999875443211 1223333222233444445567899999999999988877654332
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~ 171 (981)
...+.| ..+..++.. .+|.+..+|..+|+.+-+..
T Consensus 211 ~~~~~~-----~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~ 246 (393)
T 1erj_A 211 TVAVSP-----GDGKYIAAGSLDRAVRVWDSETGFLVERLD 246 (393)
T ss_dssp EEEECS-----TTCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEC-----CCCCEEEEEcCCCcEEEEECCCCcEEEeec
Confidence 111111 123344444 48999999999998876653
No 119
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.44 E-value=0.75 Score=49.87 Aligned_cols=161 Identities=14% Similarity=0.151 Sum_probs=88.7
Q ss_pred CCEEEEEcC-CCEEEEEECCCCc--cceEEEcCC-----Cc---ceeeeeeeec-CeEEEEEc--cCCEEEEEeCCCCcE
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGE--IFWRHVLGI-----ND---VVDGIDIALG-KYVITLSS--DGSTLRAWNLPDGQM 118 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~--ivWR~~l~~-----~~---~i~~l~~~~~-~~vV~Vs~--~g~~V~A~da~tG~l 118 (981)
++.+|+++. .+.|..+|+ +|+ .++...-.. .. ...++ +... ++.++|+. .++.|+.|| .+|+.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~i-a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDV-AVEPSTGAVFVSDGYCNSRIVQFS-PSGKF 177 (329)
T ss_dssp TSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEE-EECTTTCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred CCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEE-EEeCCCCeEEEEeCCCCCeEEEEc-CCCCE
Confidence 556888764 689999997 566 444432100 00 11233 1222 45555544 468999999 68999
Q ss_pred eEEEeccCccc-cCCcee-ecccccccCC-cEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEE
Q 002016 119 VWESFLRGSKH-SKPLLL-VPTNLKVDKD-SLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYV 193 (981)
Q Consensus 119 lWe~~~~~~~~-s~~~~~-v~~~~~~~~~-~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (981)
++.....+... .....+ .|.....+.+ +.++|. .+++|..+|..+|+.+.+...+.....+..+. ..++.+|.
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~pg~~~~ 255 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS--YIPGFLFA 255 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE--EETTEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee--ecCCEEEE
Confidence 98875432110 000000 0111111233 678886 48899999999999998886543222233332 12344444
Q ss_pred EEec----CCceeEEEEEECCCCceeeee
Q 002016 194 VGYA----GSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 194 vg~~----g~~~~~v~aLd~~tG~~lw~~ 218 (981)
..-. +.....+..+|..+|+.+...
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 3211 111235888999999988654
No 120
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.42 E-value=0.099 Score=57.77 Aligned_cols=192 Identities=11% Similarity=0.074 Sum_probs=94.6
Q ss_pred CCCEEEEEcC------CCEEEEEECCCCccceEEEcC---CCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEE
Q 002016 52 GRKRVVVSTE------ENVIASLDLRHGEIFWRHVLG---INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWES 122 (981)
Q Consensus 52 ~~~~VyvaT~------~g~L~ALd~~tG~ivWR~~l~---~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~ 122 (981)
++..+..++. +|.+.-.+..+|+........ ....+..+...-.+.+++ ++.++.|+.||..+|+.....
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~-~s~dg~v~lWd~~~~~~~~~~ 131 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILV-ASDSGAVELWEILEKESLLVN 131 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEE-EETTSCEEEC--------CCC
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEE-EECCCEEEEeeccccceeEEE
Confidence 4556777776 567888888777665543211 111232331122344444 555679999999999765433
Q ss_pred ecc----CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEec
Q 002016 123 FLR----GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYA 197 (981)
Q Consensus 123 ~~~----~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~ 197 (981)
... ...+ ..+.+. ..+..++.. .+|.+...|..+|+.+..+....... ..+.....++.+++.+..
T Consensus 132 ~~~~~~h~~~V-~~v~~s------pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v--~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 132 KFAKYEHDDIV-KTLSVF------SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV--NCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp CEEECCCSSCE-EEEEEC------SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECTTCSSCEEEEET
T ss_pred eeccCCCCCCE-EEEEEC------CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE--EEEEEccCCCceeeeecc
Confidence 221 1111 111111 113344444 48999999999999999886544332 222212233344444433
Q ss_pred CCceeEEEEEECCCCceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 198 GSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 198 g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+ .+...|+.+|+.............-..+.+- ++..+++.+ .++.+++.++.+++
T Consensus 203 dg---~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 203 DG---RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD-ETGNVSLVNIKNPD 260 (357)
T ss_dssp TS---CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE-SSSCEEEEESSCGG
T ss_pred CC---ceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee-cccceeEEECCCCc
Confidence 22 3777799998877554322211111112221 234666665 45788888888776
No 121
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.41 E-value=0.11 Score=57.46 Aligned_cols=152 Identities=12% Similarity=0.099 Sum_probs=88.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc-
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH- 129 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~- 129 (981)
+++.++.++.+|.|.-.|.++|+.+-...-. ...+..+... .+..+++.++.++.|+.||..+|+..-+........
T Consensus 138 dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~ 216 (344)
T 4gqb_B 138 SGTQAVSGSKDICIKVWDLAQQVVLSSYRAH-AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYL 216 (344)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcCc-CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeecc
Confidence 4677999999999999999999987654321 1233333222 233454445567899999999999887654432211
Q ss_pred cCCceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
.....+.| . ++.+++ . .||.|..+|..+|+.+.+........ ..+..+..+..+++.+...+ .+...
T Consensus 217 ~~~~~~~p-----~-~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v--~~v~fsp~g~~~lasgs~D~---~i~vw 285 (344)
T 4gqb_B 217 PTSLAWHP-----Q-QSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV--TGLVFSPHSVPFLASLSEDC---SLAVL 285 (344)
T ss_dssp EEEEEECS-----S-CTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE--EEEEECSSSSCCEEEEETTS---CEEEE
T ss_pred ceeeeecC-----C-CCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE--EEEEEccCCCeEEEEEeCCC---eEEEE
Confidence 01111111 1 233444 3 48999999999999988876544332 22322233334444333322 37778
Q ss_pred ECCCCcee
Q 002016 208 NAMNGELL 215 (981)
Q Consensus 208 d~~tG~~l 215 (981)
|..+|+.+
T Consensus 286 d~~~~~~~ 293 (344)
T 4gqb_B 286 DSSLSELF 293 (344)
T ss_dssp CTTCCEEE
T ss_pred ECCCCcEE
Confidence 99998765
No 122
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.38 E-value=1.5 Score=47.53 Aligned_cols=188 Identities=10% Similarity=0.007 Sum_probs=109.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeE----EEeccCc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVW----ESFLRGS 127 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llW----e~~~~~~ 127 (981)
++..+++++.+|.|...|..+|+.+........ .+..+.....+..++.++.++.++.||..++.... +......
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~ 144 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG 144 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred CCCEEEEEeCCCcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc
Confidence 466799999999999999999998877665433 23223122344455556667899999998875322 2222221
Q ss_pred cccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEE
Q 002016 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~a 206 (981)
.. ....+. .++.++.. .||.+...|..+|+..-++....... ..+... .++..++.|...+ .+..
T Consensus 145 ~v-~~~~~~-------~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~~-~~~~~l~sg~~d~---~v~~ 210 (340)
T 1got_B 145 YL-SCCRFL-------DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV--MSLSLA-PDTRLFVSGACDA---SAKL 210 (340)
T ss_dssp CE-EEEEEE-------ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEEC-TTSSEEEEEETTS---CEEE
T ss_pred cE-EEEEEC-------CCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCce--EEEEEC-CCCCEEEEEeCCC---cEEE
Confidence 11 011111 13444444 58999999999999887775443332 222212 2344444443332 4777
Q ss_pred EECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 207 INAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 207 Ld~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.|..+|+.+....... ..+. .+.+- .++.+++.. .++.+++-++.++.
T Consensus 211 wd~~~~~~~~~~~~h~-~~v~-~v~~~p~~~~l~s~s-~d~~v~iwd~~~~~ 259 (340)
T 1got_B 211 WDVREGMCRQTFTGHE-SDIN-AICFFPNGNAFATGS-DDATCRLFDLRADQ 259 (340)
T ss_dssp EETTTCSEEEEECCCS-SCEE-EEEECTTSSEEEEEE-TTSCEEEEETTTTE
T ss_pred EECCCCeeEEEEcCCc-CCEE-EEEEcCCCCEEEEEc-CCCcEEEEECCCCc
Confidence 8999998775542111 1111 11121 344565554 46889999988876
No 123
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.37 E-value=0.62 Score=50.20 Aligned_cols=191 Identities=10% Similarity=0.026 Sum_probs=106.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
+++.+++++.+|.|...|.++|+..-...+... ..+..+.....+..+++++.++.++.||..+++..|..........
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence 467799999999999999999986666554332 2233332222444566566667999999999886554332211110
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEEC------------------CCCcEeEEEeccCcceeeeEEEEeecCCeE
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSS------------------IDGEILWTRDFAAESVEVQQVIQLDESDQI 191 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~------------------~tG~~~W~~~~~~~~~~~~~vv~s~~~~~V 191 (981)
....-+.. ...+..+++. .+|.+..+|. .+|+..-.+....... ..+.....+..+
T Consensus 143 ~~i~~~~~---~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l 217 (372)
T 1k8k_C 143 STVLSLDW---HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV--HGVCFSANGSRV 217 (372)
T ss_dssp SCEEEEEE---CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE--EEEEECSSSSEE
T ss_pred CCeeEEEE---cCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE--EEEEECCCCCEE
Confidence 11111100 0123344444 4888988884 4677766664332222 222222344455
Q ss_pred EEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeec
Q 002016 192 YVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (981)
Q Consensus 192 yvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~s 255 (981)
+..+.+| .+..+|..+|+.+....... ..+. .+.+. .+..+++. .++.+++-++.+
T Consensus 218 ~~~~~d~----~i~i~d~~~~~~~~~~~~~~-~~v~-~~~~~~~~~~l~~~--~d~~i~i~~~~~ 274 (372)
T 1k8k_C 218 AWVSHDS----TVCLADADKKMAVATLASET-LPLL-AVTFITESSLVAAG--HDCFPVLFTYDS 274 (372)
T ss_dssp EEEETTT----EEEEEEGGGTTEEEEEECSS-CCEE-EEEEEETTEEEEEE--TTSSCEEEEEET
T ss_pred EEEeCCC----EEEEEECCCCceeEEEccCC-CCeE-EEEEecCCCEEEEE--eCCeEEEEEccC
Confidence 5444334 58889999999887664211 1111 12222 23344444 467888888877
No 124
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.28 E-value=0.31 Score=54.12 Aligned_cols=200 Identities=11% Similarity=0.066 Sum_probs=107.0
Q ss_pred cCCCEEEEEcC----------CCEEEEEECCCCccceEEEcCCCc-----ceeeeeeeecCeEEEEEcc--CCEEEEEeC
Q 002016 51 TGRKRVVVSTE----------ENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSSD--GSTLRAWNL 113 (981)
Q Consensus 51 ~~~~~VyvaT~----------~g~L~ALd~~tG~ivWR~~l~~~~-----~i~~l~~~~~~~vV~Vs~~--g~~V~A~da 113 (981)
.+++.+|++++ ++.|..+|+++++++.+..+.... ....+...-++..++++.. ++.|..||.
T Consensus 59 pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~ 138 (361)
T 2oiz_A 59 NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDV 138 (361)
T ss_dssp TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEET
T ss_pred CCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEEC
Confidence 45778999973 578999999999999888764221 1112322335557776642 468999999
Q ss_pred CCCcEeEE-EeccCc----cccCC-cee-----------ecc-------------------ccc-----ccCCcEEEEE-
Q 002016 114 PDGQMVWE-SFLRGS----KHSKP-LLL-----------VPT-------------------NLK-----VDKDSLILVS- 151 (981)
Q Consensus 114 ~tG~llWe-~~~~~~----~~s~~-~~~-----------v~~-------------------~~~-----~~~~~~V~V~- 151 (981)
++|+++-+ ....+. ..+.+ ..+ +.. ..+ ...++.+++.
T Consensus 139 ~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 218 (361)
T 2oiz_A 139 AKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS 218 (361)
T ss_dssp TTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB
T ss_pred CCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe
Confidence 99988766 333211 00000 000 000 000 0001112222
Q ss_pred eCCEEEEEECCCCcEe----EEEecc---Ccceeee---EEEEeecCCeEEEEEe-cCC------ceeEEEEEECCCCce
Q 002016 152 SKGCLHAVSSIDGEIL----WTRDFA---AESVEVQ---QVIQLDESDQIYVVGY-AGS------SQFHAYQINAMNGEL 214 (981)
Q Consensus 152 ~~g~l~aLd~~tG~~~----W~~~~~---~~~~~~~---~vv~s~~~~~Vyvvg~-~g~------~~~~v~aLd~~tG~~ 214 (981)
.++.++.+|..++... |..... .....+. .+....+++.+|+... .+. ....+..+|+++++.
T Consensus 219 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~ 298 (361)
T 2oiz_A 219 YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR 298 (361)
T ss_dssp TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE
T ss_pred CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE
Confidence 3566777776655422 321110 0000111 1222345688888654 221 123689999999998
Q ss_pred eeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecC
Q 002016 215 LNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 215 lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
+-...+..| ..+.+- .+..+++.+ . +.+.++|+.++
T Consensus 299 v~~i~~~~p----~~ia~spdg~~l~v~n-~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 299 VARIPGRDA----LSMTIDQQRNLMLTLD-G-GNVNVYDISQP 335 (361)
T ss_dssp EEEEECTTC----CEEEEETTTTEEEEEC-S-SCEEEEECSSS
T ss_pred EEEEecCCe----eEEEECCCCCEEEEeC-C-CeEEEEECCCC
Confidence 877644332 122232 344666665 3 89999999998
No 125
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.27 E-value=0.18 Score=53.82 Aligned_cols=110 Identities=8% Similarity=0.079 Sum_probs=73.8
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCc
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPL 133 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~ 133 (981)
..++.++.++.|...|.++|+.+....-.. ..+..+....++..++.++.++.++.||..+++.+.......... ..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~--~~ 262 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIIN--AL 262 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEE--EE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEE--ee
Confidence 346677889999999999998766543222 234333222244455556667899999999999998887654332 11
Q ss_pred eeecccccccCCcEEEE-EeCCEEEEEECCCCcEeEEEecc
Q 002016 134 LLVPTNLKVDKDSLILV-SSKGCLHAVSSIDGEILWTRDFA 173 (981)
Q Consensus 134 ~~v~~~~~~~~~~~V~V-~~~g~l~aLd~~tG~~~W~~~~~ 173 (981)
.+. .++.+++ ..++.+...|..++...++....
T Consensus 263 ~~~-------~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 263 CFS-------PNRYWLCAATGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp EEC-------SSSSEEEEEETTEEEEEETTTTEEEEEECCC
T ss_pred ecC-------CCCceeeccCCCEEEEEECCCCeEEEecccc
Confidence 111 1333444 46999999999999998887643
No 126
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.24 E-value=2.1 Score=47.80 Aligned_cols=146 Identities=10% Similarity=0.058 Sum_probs=83.3
Q ss_pred EEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCce
Q 002016 56 VVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLL 134 (981)
Q Consensus 56 VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~ 134 (981)
+++..-++.|+--|+.||+......+... +.+..+...-++..+++++.++.|+.||..+|+.+.......... ..
T Consensus 118 ~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v---~~ 194 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV---GS 194 (420)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE---EE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCce---EE
Confidence 44444588999999999998887777554 234444222344566657777899999999999999887654332 11
Q ss_pred eecccccccCCcEEEEE-eCCEEEEEECCCCcE-eEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCC
Q 002016 135 LVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI-LWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (981)
Q Consensus 135 ~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~-~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG 212 (981)
+. ..+..++.. .++.+...|...... ..+........ ..+.....+..+...+.+| .+...|..+|
T Consensus 195 ~s------~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~--~~~~~~~~g~~l~s~~~D~----~v~i~~~~~~ 262 (420)
T 4gga_A 195 LS------WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAPDGRHLASGGNDN----LVNVWPSAPG 262 (420)
T ss_dssp EE------EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEEEEEETTS----CEEEEESSCC
T ss_pred Ee------eCCCEEEEEeCCCceeEeeecccceeeEEecccccce--eeeeecCCCCeeeeeeccc----cceEEeeccc
Confidence 11 112333333 377888777766543 23332222211 1121122333443333333 3667788877
Q ss_pred ceee
Q 002016 213 ELLN 216 (981)
Q Consensus 213 ~~lw 216 (981)
+..+
T Consensus 263 ~~~~ 266 (420)
T 4gga_A 263 EGGW 266 (420)
T ss_dssp SSCS
T ss_pred cccc
Confidence 7543
No 127
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.23 E-value=0.37 Score=51.22 Aligned_cols=189 Identities=10% Similarity=0.034 Sum_probs=106.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCC-Ccceeeeeee-ecC-eEEEEEccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIA-LGK-YVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~-~~~i~~l~~~-~~~-~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
.+..++.++.++.+...|...+... ...+.. ...+...... .+. ..++.++.++.++.||..+|+.+.........
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~ 217 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVCKY-TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 217 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEE-EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred cCccceeecCCCeEEEEEeCCCceE-EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc
Confidence 3556888888998888887665432 222222 1222222111 222 33343555679999999999998877654432
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
+ ..+.+- ..+..++.. .||.+...|..+++.+.......... .+. ...++.+++.+..+ .+...
T Consensus 218 v-~~~~~s------~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~---~~~-~~~~~~~~~~~~d~----~i~iw 282 (340)
T 4aow_A 218 L-NTVTVS------PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIIN---ALC-FSPNRYWLCAATGP----SIKIW 282 (340)
T ss_dssp E-EEEEEC------TTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEE---EEE-ECSSSSEEEEEETT----EEEEE
T ss_pred E-EEEEEC------CCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEE---eee-cCCCCceeeccCCC----EEEEE
Confidence 2 112121 113344444 48999999999999988876654321 221 12344555444444 47778
Q ss_pred ECCCCceeeeeeeeccC----CccCc---eEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 208 NAMNGELLNHETAAFSG----GFVGD---VALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 208 d~~tG~~lw~~~v~~p~----~~~~~---~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|..++..+++..-.... .-.+. +.+- .+..+++.. .+|.+++=++.+|+
T Consensus 283 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 283 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-TDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEC--
T ss_pred ECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEeCCCcC
Confidence 99999888766422111 11111 1111 234666655 45788888888875
No 128
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.32 Score=54.42 Aligned_cols=158 Identities=15% Similarity=0.100 Sum_probs=97.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcC-CCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc-cc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLG-INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS-KH 129 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~-~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~-~~ 129 (981)
++..+++++.+|.|...|.++|+.+++.... ....+..+.....+..++.++.++.|+.||..+|+.+-....... ..
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI 260 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence 3567999999999999999999999987753 122344442223455566566678999999999999887764322 11
Q ss_pred cCCceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEeEEEeccCcce-----e-------------------eeEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESV-----E-------------------VQQVI 183 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~~~~-----~-------------------~~~vv 183 (981)
..+.+.|. ...++..++ . .||.+...|..+|+....+....... . ...+.
T Consensus 261 -~~~~~~~~---~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 261 -THVEVCQF---YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp -EEEEECTT---TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred -EEEEeccc---cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 11111111 112343444 4 48999999999999887776432110 0 11111
Q ss_pred EeecCCeEEEEEecCCceeEEEEEECCCCceeeee
Q 002016 184 QLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 184 ~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
..++..++.+-..+ .+...|..+|+.+...
T Consensus 337 --~~~~~~l~s~~~d~---~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 337 --VSNDKILLTDEATS---SIVMFSLNELSSSKAV 366 (437)
T ss_dssp --EETTEEEEEEGGGT---EEEEEETTCGGGCEEE
T ss_pred --ECCceEEEecCCCC---eEEEEECCCcccceEE
Confidence 12445444443322 5888899999877554
No 129
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.21 E-value=2 Score=47.37 Aligned_cols=109 Identities=12% Similarity=0.142 Sum_probs=71.2
Q ss_pred CCCEEEEEcC------CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc----------cCCEEEEEeCCC
Q 002016 52 GRKRVVVSTE------ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLPD 115 (981)
Q Consensus 52 ~~~~VyvaT~------~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~----------~g~~V~A~da~t 115 (981)
+.+++|+++. ++.|+.+|+++|+++=+...... . ++...-++..++++. .++.|..||..+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~--p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN--G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE--E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC--C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4567999874 57999999999998754433221 1 332233555666653 135799999999
Q ss_pred CcEeEEEeccCcc-----ccCCceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEE
Q 002016 116 GQMVWESFLRGSK-----HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWT 169 (981)
Q Consensus 116 G~llWe~~~~~~~-----~s~~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~ 169 (981)
++++.+..+.... .+....+- ..++.+++.. ++.+..+|.++|+++-+
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~s------pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQT------TDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEEC------TTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEEC------CCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 9999888765211 10111111 1255788852 57899999999988755
No 130
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.13 E-value=0.16 Score=54.39 Aligned_cols=187 Identities=10% Similarity=-0.006 Sum_probs=100.8
Q ss_pred CCC-EEEEEcCCCEEEEEEC-CCCccceEEEcCC---CcceeeeeeeecCeEEEEEccCCEEEEEeCCC---------Cc
Q 002016 52 GRK-RVVVSTEENVIASLDL-RHGEIFWRHVLGI---NDVVDGIDIALGKYVITLSSDGSTLRAWNLPD---------GQ 117 (981)
Q Consensus 52 ~~~-~VyvaT~~g~L~ALd~-~tG~ivWR~~l~~---~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~t---------G~ 117 (981)
++. .+++++.+|.|...|. ++|+. ..+.. ...+..+.... +..++.++.++.++.||..+ ++
T Consensus 67 ~~~~~l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (342)
T 1yfq_A 67 NTDLQIYVGTVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp SSSEEEEEEETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred CCCcEEEEEcCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC
Confidence 466 7999999999999999 88876 33332 22343332222 45555566678999999988 77
Q ss_pred EeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCC-CcEeEEEeccCcceeeeEEEEeecCCeEEEEE
Q 002016 118 MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID-GEILWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (981)
Q Consensus 118 llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~t-G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg 195 (981)
.++......... ...+ ..++ +++. .+|.+..+|..+ +..............+..+.....++..++.+
T Consensus 143 ~~~~~~~~~~v~--~~~~-------~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 143 NSNNTKVKNKIF--TMDT-------NSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp CSSSSSSCCCEE--EEEE-------CSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred eeeEEeeCCceE--EEEe-------cCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 776655332221 1111 1233 4444 589999999998 76543322221111122232222033444444
Q ss_pred ecCCceeEEEEEECCCC------ceeeeeeeeccC--------CccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 196 YAGSSQFHAYQINAMNG------ELLNHETAAFSG--------GFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 196 ~~g~~~~~v~aLd~~tG------~~lw~~~v~~p~--------~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
...+ .+...|..++ +........... .+. .+.+. .+..+++.. .+|.+++-++.+++
T Consensus 213 ~~dg---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 213 SIDG---RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN-SIEFSPRHKFLYTAG-SDGIISCWNLQTRK 284 (342)
T ss_dssp ETTS---EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE-EEEECTTTCCEEEEE-TTSCEEEEETTTTE
T ss_pred ecCC---cEEEEEEcCCCcccccccceeeecccccccccccceeEE-EEEEcCCCCEEEEec-CCceEEEEcCccHh
Confidence 4332 4666666665 555444322110 111 11111 234555554 46788888888876
No 131
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.09 E-value=0.27 Score=57.28 Aligned_cols=187 Identities=12% Similarity=0.085 Sum_probs=109.2
Q ss_pred CCCEEEEEcCC----CEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccC
Q 002016 52 GRKRVVVSTEE----NVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRG 126 (981)
Q Consensus 52 ~~~~VyvaT~~----g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~ 126 (981)
++..+++++.+ +.|...| +|+.+....-.. ..+..+... .+...++.++.++.++.||..+|+.+.......
T Consensus 127 ~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 127 EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS-QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS-SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS
T ss_pred CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC-ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC
Confidence 45567777766 6777776 666554432211 223333212 233255556667899999999999998877554
Q ss_pred c---cccCCceeecccccccC-CcEEEEE-eCCEEEEEECCCCcEeEEE-e---ccCcceeeeEEEEeecCCeEEEEEec
Q 002016 127 S---KHSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGEILWTR-D---FAAESVEVQQVIQLDESDQIYVVGYA 197 (981)
Q Consensus 127 ~---~~s~~~~~v~~~~~~~~-~~~V~V~-~~g~l~aLd~~tG~~~W~~-~---~~~~~~~~~~vv~s~~~~~Vyvvg~~ 197 (981)
. .. ....+. .. +..+++. .+|.+..+|..+|+...+. . ..... ...+... .+..++..+..
T Consensus 204 ~~~~~v-~~~~~~------~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 204 KQGSFV-RDVEFS------PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG--IFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp CTTCCE-EEEEEC------STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC--EEEEEES-SSSEEEEEETT
T ss_pred CCCceE-EEEEEC------CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc--eEEEEEc-CCCEEEEEcCC
Confidence 3 22 111121 12 3345554 4899999999999999887 3 22222 2233323 34444443333
Q ss_pred CCceeEEEEEECCCCceeeeeeeeccCCccC---ceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 198 GSSQFHAYQINAMNGELLNHETAAFSGGFVG---DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 198 g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~---~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
| .+...|..+|+.+........ .... .+.+..++.+++.. .++.+++.++.+++
T Consensus 274 ~----~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 274 A----TIRVWDVTTSKCVQKWTLDKQ-QLGNQQVGVVATGNGRIISLS-LDGTLNFYELGHDE 330 (615)
T ss_dssp S----EEEEEETTTTEEEEEEECCTT-CGGGCEEEEEEEETTEEEEEE-TTSCEEEEETTEEE
T ss_pred C----cEEEEECCCCcEEEEEcCCCC-cccCceeEEEeCCCCeEEEEE-CCCCEEEEECCCCc
Confidence 3 588899999998877654321 1111 23333556666665 46888888887765
No 132
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.04 E-value=2.1 Score=46.13 Aligned_cols=187 Identities=11% Similarity=0.032 Sum_probs=96.8
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeee--cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc-cccC
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL--GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS-KHSK 131 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~--~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~-~~s~ 131 (981)
.+.+-+.++.+...|.++++++........+.+..+.... .+..++.++.++.++.||..+|+.......... .. .
T Consensus 96 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i-~ 174 (343)
T 3lrv_A 96 RLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEY-S 174 (343)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCC-C
T ss_pred eEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCce-E
Confidence 3444444444445566788777777665443344332222 444555456677999999999999665533322 11 1
Q ss_pred CceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEe-EEEec-cCcceeeeEEEEeecCCeEEEEEecCCceeEEEEE
Q 002016 132 PLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEIL-WTRDF-AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~-W~~~~-~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aL 207 (981)
...+- .++..++ . .||.+..+|..+|+.. -++.. .... ...+..+ .++...+.+..+ .+...
T Consensus 175 ~~~~~-------pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~--v~~l~fs-~~g~~l~s~~~~----~v~iw 240 (343)
T 3lrv_A 175 SGVLH-------KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK--IKEVKFA-DNGYWMVVECDQ----TVVCF 240 (343)
T ss_dssp EEEEC-------TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC--EEEEEEC-TTSSEEEEEESS----BEEEE
T ss_pred EEEEC-------CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC--EEEEEEe-CCCCEEEEEeCC----eEEEE
Confidence 11111 1333444 3 4999999999999976 55544 1222 2223222 233333334344 47778
Q ss_pred ECCCCceeeeeeee-cc-CCccCceEEE--cCcEEEEEECCCCeEEEEEeecC
Q 002016 208 NAMNGELLNHETAA-FS-GGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 208 d~~tG~~lw~~~v~-~p-~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
|+.+++.......- .. ..+...++.. .+..+++....++.+++-++.++
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 99988776443210 00 1111111222 33455554443567777777554
No 133
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.97 E-value=0.66 Score=52.04 Aligned_cols=159 Identities=12% Similarity=0.048 Sum_probs=93.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+++.++.++.++.|.-.|.++|+.+-...-.. ..+..+....++..++.++.++.|+.||..+|+..=+........ .
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v-~ 280 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVV-E 280 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-E
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceE-E
Confidence 46679999999999999999998765543222 123333222344455556667899999999998776554333221 1
Q ss_pred Cceeecccc------c--------ccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEe
Q 002016 132 PLLLVPTNL------K--------VDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGY 196 (981)
Q Consensus 132 ~~~~v~~~~------~--------~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~ 196 (981)
...+.|... . ...+..++.. .||.+..+|..+|+.+.+........ ..+.....+..++..+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v--~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLFHSGGKFILSCAD 358 (410)
T ss_dssp EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE--EEEEECSSSSCEEEEET
T ss_pred EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE--EEEEEcCCCCEEEEEeC
Confidence 111111000 0 0012344444 49999999999999888776543322 22322233444444333
Q ss_pred cCCceeEEEEEECCCCceeeee
Q 002016 197 AGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 197 ~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
+| .+...|..+|+.+...
T Consensus 359 D~----~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 359 DK----TLRVWDYKNKRCMKTL 376 (410)
T ss_dssp TT----EEEEECCTTSCCCEEE
T ss_pred CC----eEEEEECCCCceEEEE
Confidence 33 5788898888876554
No 134
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.96 E-value=0.7 Score=49.72 Aligned_cols=200 Identities=7% Similarity=-0.037 Sum_probs=102.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC-Ccceeeeeeeec--CeEEEEEccCCEEEEEeCCCCcEe--EEEeccCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQMV--WESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~-~~~i~~l~~~~~--~~vV~Vs~~g~~V~A~da~tG~ll--We~~~~~~ 127 (981)
+..+++++.+|.|...|.++|+..-...+.. ...+..+..... +..++.++.++.++.||..++... ........
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 6779999999999999999997222222221 122333322222 455665666789999999988432 22222221
Q ss_pred cccCCceeeccccc-------ccCCcEEEEE-eCCEEEEEECCCCcEeEEEecc--CcceeeeEEEEeecC--CeEEEEE
Q 002016 128 KHSKPLLLVPTNLK-------VDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA--AESVEVQQVIQLDES--DQIYVVG 195 (981)
Q Consensus 128 ~~s~~~~~v~~~~~-------~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~--~~~~~~~~vv~s~~~--~~Vyvvg 195 (981)
.. ....+.|.... ...+..+++. .+|.+..+|..+++..|..... ........+..+... +..++.+
T Consensus 149 ~v-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 149 GV-NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp CE-EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred ce-EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 11 11111110000 0013344444 4899999999888766654321 111112223222231 4444444
Q ss_pred ecCCceeEEEEEECCCCceeeeeeeeccCCccCc---eEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 196 YAGSSQFHAYQINAMNGELLNHETAAFSGGFVGD---VALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 196 ~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~---~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
...+ .+...|..+|+..+...+.......+. +.+- .+..+++.. .+|.+++-++..+.
T Consensus 228 ~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 228 SQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKENLEG 289 (379)
T ss_dssp ETTS---CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE-SSSSEEEEEEEETT
T ss_pred eCCC---EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec-CCCcEEEEeCCCCC
Confidence 3332 377778888875554443322222221 1221 333455544 36788888887643
No 135
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.95 E-value=0.57 Score=48.40 Aligned_cols=183 Identities=11% Similarity=0.011 Sum_probs=88.3
Q ss_pred CCEEEE-E-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 53 RKRVVV-S-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 53 ~~~Vyv-a-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
++++|+ + +..+.|..+|+.++.. +...........++ ....++.++++..++.|+.||+.+ ...+........
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i-~~~~~g~l~v~~~~~~i~~~d~~~-~~~~~~~~~~~~-- 108 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGL-AVDGAGTVYVTDFNNRVVTLAAGS-NNQTVLPFDGLN-- 108 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCE-EECTTCCEEEEETTTEEEEECTTC-SCCEECCCCSCS--
T ss_pred CCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCccee-EECCCCCEEEEcCCCEEEEEeCCC-ceEeeeecCCcC--
Confidence 557998 7 5678999999866653 22222111112233 123333455554367999999864 444444322111
Q ss_pred CCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 131 KPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
.+..+. .+.++.+++. .++.++.++..++...+.... ....+..+. ...++.+|+....++ .+..+|
T Consensus 109 ~p~~i~-----~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~~~~p~~i~-~~~~g~l~v~~~~~~---~i~~~~ 177 (270)
T 1rwi_B 109 YPEGLA-----VDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT--GLNDPDGVA-VDNSGNVYVTDTDNN---RVVKLE 177 (270)
T ss_dssp SEEEEE-----ECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC--SCCSCCCEE-ECTTCCEEEEEGGGT---EEEEEC
T ss_pred CCcceE-----ECCCCCEEEEECCCCEEEEEECCCceeEeeccc--cCCCceeEE-EeCCCCEEEEECCCC---EEEEEe
Confidence 111111 1224457775 378999997666554432111 111123332 224567887665433 588899
Q ss_pred CCCCceeeeeeeeccCCccC-ceEEE-cCcEEEEEECCCCeEEEEEeec
Q 002016 209 AMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKN 255 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~-~~~~v-g~~~lv~~d~~~g~L~v~~L~s 255 (981)
..++...... ...+.. ..+.+ .++.+++.+..++.+.+.+..+
T Consensus 178 ~~~~~~~~~~----~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 178 AESNNQVVLP----FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp TTTCCEEECC----CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred cCCCceEeec----ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 8776543221 111111 11222 2334445554455666666543
No 136
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.32 Score=53.56 Aligned_cols=197 Identities=6% Similarity=0.025 Sum_probs=104.4
Q ss_pred CCCEEEEEcCCCEEEEEECCC---Cc-cceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCc------EeE
Q 002016 52 GRKRVVVSTEENVIASLDLRH---GE-IFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQ------MVW 120 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~t---G~-ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~------llW 120 (981)
++..+++++.+|.|...|..+ |. .+.+. ......+..+... .++..++.++.++.|+.||..+++ ...
T Consensus 78 ~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 156 (416)
T 2pm9_A 78 NNKIIAGALDNGSLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL 156 (416)
T ss_dssp SSSCEEEEESSSCEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB
T ss_pred CCCeEEEEccCCeEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc
Confidence 456788999999999999988 32 22221 1122233333222 224566656667899999999997 443
Q ss_pred EEec---cCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCc----ceeeeEEEEeecCCeEE
Q 002016 121 ESFL---RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE----SVEVQQVIQLDESDQIY 192 (981)
Q Consensus 121 e~~~---~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~----~~~~~~vv~s~~~~~Vy 192 (981)
.... ..... ..+.+.+ +.+..++.. .+|.+..+|..+|+...+...... ......+.....+..++
T Consensus 157 ~~~~~~~~~~~v-~~~~~~~-----~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 157 TPGQSMSSVDEV-ISLAWNQ-----SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230 (416)
T ss_dssp CCCCSCCSSCCC-CEEEECS-----SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred ccccccCCCCCe-eEEEeCC-----CCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEE
Confidence 3211 11111 1111111 112344444 589999999999999888876421 11122232222333455
Q ss_pred EEEecCCceeEEEEEECCCCc-eeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 193 VVGYAGSSQFHAYQINAMNGE-LLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 193 vvg~~g~~~~~v~aLd~~tG~-~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+.+..++....+..+|..+++ ++......-...+. .+.+. ++..+++.. .++.+++-++.+++
T Consensus 231 ~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~~l~s~~-~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGIL-SLDWCHQDEHLLLSSG-RDNTVLLWNPESAE 296 (416)
T ss_dssp EEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEE-EEEECSSCSSCEEEEE-SSSEEEEECSSSCC
T ss_pred EEEECCCCCceEEEEeCCCCCCCcEEeecCccCcee-EEEeCCCCCCeEEEEe-CCCCEEEeeCCCCc
Confidence 445443211137778988874 44333101111111 12221 334555554 46889888888876
No 137
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.90 E-value=1.3 Score=47.63 Aligned_cols=189 Identities=8% Similarity=-0.024 Sum_probs=100.1
Q ss_pred cccccccccEeEEEeccCceeeeeeeecccCCCEEEEEcCC------------CEEEEEECCCCccceEEEcCCCcceee
Q 002016 22 SLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEE------------NVIASLDLRHGEIFWRHVLGINDVVDG 89 (981)
Q Consensus 22 AlyedqvG~~dW~~~~vG~~~~~~f~~~~~~~~~VyvaT~~------------g~L~ALd~~tG~ivWR~~l~~~~~i~~ 89 (981)
-.|+.+.++ |+..-.-.|.....+.....++.||+.... +.+..+|+.+++ |+..-+.+..-.+
T Consensus 16 ~~yd~~~~~--W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~ 91 (315)
T 4asc_A 16 VAYDPAANE--CYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--WLGMPPLPSPRCL 91 (315)
T ss_dssp EEEETTTTE--EEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--EEECCCBSSCEES
T ss_pred EEECCCCCe--EecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe--EEECCCCCcchhc
Confidence 345555544 885221111111222223346677765541 238899999885 9764332211111
Q ss_pred -eeeeecCeEEEEEccC--------CEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeC-------
Q 002016 90 -IDIALGKYVITLSSDG--------STLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSK------- 153 (981)
Q Consensus 90 -l~~~~~~~vV~Vs~~g--------~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~------- 153 (981)
..+..++.++++||.+ ..+..+|..+++ |+.-..-+.. . . .+.....++.+++.++
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~---r--~-~~~~~~~~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYV---V--Y-GHTVLSHMDLVYVIGGKGSDRKC 163 (315)
T ss_dssp CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSC---C--B-SCEEEEETTEEEEECCBCTTSCB
T ss_pred eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCc---c--c-ceeEEEECCEEEEEeCCCCCCcc
Confidence 1124566677777621 459999998885 8865332111 0 0 0011112455666531
Q ss_pred -CEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCeEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccC
Q 002016 154 -GCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG 228 (981)
Q Consensus 154 -g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~ 228 (981)
..+..+|..++ .|+.-.+.+.- ....+ ...++.+|++|-.++. .-.+..+|+.++ .|+..-..|....+
T Consensus 164 ~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 164 LNKMCVYDPKKF--EWKELAPMQTARSLFGA--TVHDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQERSS 236 (315)
T ss_dssp CCCEEEEETTTT--EEEECCCCSSCCBSCEE--EEETTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSCCBS
T ss_pred cceEEEEeCCCC--eEEECCCCCCchhceEE--EEECCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCcccc
Confidence 36889998876 68875432211 01112 2357888888754321 235888999877 68775444544444
No 138
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.86 E-value=1.2 Score=48.74 Aligned_cols=187 Identities=12% Similarity=0.038 Sum_probs=104.3
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcC-CCcceeeeeeee-cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc--
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLG-INDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH-- 129 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~-~~~~i~~l~~~~-~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~-- 129 (981)
..+++++.+|.|.-.|..+|+..-...+. ....+..+...- ++..++.++.++.++.||..+ ...-.........
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYW 165 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCC
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCC
Confidence 67999999999999999999877766542 223344442222 334555566678999999985 4444443322100
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
.....+. ..+..++.. .+|.+..+|. +|+..++........ ..+.....+..+++.+...+ .+...|
T Consensus 166 v~~~~~~------~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v--~~~~~~~~~~~~l~s~~~d~---~i~iwd 233 (383)
T 3ei3_B 166 YCCVDVS------VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV--THAEFNPRCDWLMATSSVDA---TVKLWD 233 (383)
T ss_dssp EEEEEEE------TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE--EEEEECSSCTTEEEEEETTS---EEEEEE
T ss_pred eEEEEEC------CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE--EEEEECCCCCCEEEEEeCCC---EEEEEe
Confidence 0111111 123344444 4899999998 788888876544332 22322223331444443332 578889
Q ss_pred CCC----CceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCe
Q 002016 209 AMN----GELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 209 ~~t----G~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+.+ ++.+... .-...+. .+.+- .+..+++.. .++.+++-++.+++
T Consensus 234 ~~~~~~~~~~~~~~--~~~~~v~-~~~~s~~~~~~l~~~~-~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM--PHEKPVN-AAYFNPTDSTKLLTTD-QRNEIRVYSSYDWS 284 (383)
T ss_dssp GGGCCSTTCEEEEE--ECSSCEE-EEEECTTTSCEEEEEE-SSSEEEEEETTBTT
T ss_pred CCCCCcccceEEEe--cCCCceE-EEEEcCCCCCEEEEEc-CCCcEEEEECCCCc
Confidence 888 4444333 1111111 11221 224555554 45788888888765
No 139
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.81 E-value=2.2 Score=44.52 Aligned_cols=148 Identities=9% Similarity=0.041 Sum_probs=82.0
Q ss_pred EEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCce
Q 002016 56 VVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLL 134 (981)
Q Consensus 56 VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~ 134 (981)
+++++.++.|.--|.+||+.+-...+... ..+..+.....+..++.++.++.|+.||..+|+.+.......... ..
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~---~~ 114 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV---GS 114 (318)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE---EE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceE---EE
Confidence 44444578999999999998877776544 234444222344455556667899999999999999887654332 01
Q ss_pred eecccccccCCcEEEEE-eCCEEEEEECCCCcEeEE-EeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCC
Q 002016 135 LVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWT-RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (981)
Q Consensus 135 ~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~-~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG 212 (981)
.. ..+..++.. .++.+...+..++...-. ........ ..+.....+..++..+.+| .+...|..+|
T Consensus 115 ~~------~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~ 182 (318)
T 4ggc_A 115 LS------WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAPDGRHLASGGNDN----LVNVWPSAPG 182 (318)
T ss_dssp EE------EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEEEEEETTS----CEEEEESSCB
T ss_pred ee------cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCce--EEEEEcCCCCEEEEEecCc----ceeEEECCCC
Confidence 11 112333333 366776666666543322 21111111 1121122333343333333 3677788888
Q ss_pred ceeeee
Q 002016 213 ELLNHE 218 (981)
Q Consensus 213 ~~lw~~ 218 (981)
+.....
T Consensus 183 ~~~~~~ 188 (318)
T 4ggc_A 183 EGGWVP 188 (318)
T ss_dssp TTBSCC
T ss_pred cccccc
Confidence 765443
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.77 E-value=2.8 Score=45.34 Aligned_cols=195 Identities=12% Similarity=0.131 Sum_probs=94.0
Q ss_pred EEEEEcCCC------EEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEcc----CCEEEEEeC--CCCcEeEEE
Q 002016 55 RVVVSTEEN------VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD----GSTLRAWNL--PDGQMVWES 122 (981)
Q Consensus 55 ~VyvaT~~g------~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~----g~~V~A~da--~tG~llWe~ 122 (981)
.+|+++..+ .++.+|+++|++...... .......+...-++..+++++. .+.++.|+. .+|++.--.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 477776432 577789999998877665 2212222312223444554433 257876654 457654433
Q ss_pred eccCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEE----Eecc--Ccc------eeeeEEEEeecC
Q 002016 123 FLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWT----RDFA--AES------VEVQQVIQLDES 188 (981)
Q Consensus 123 ~~~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~----~~~~--~~~------~~~~~vv~s~~~ 188 (981)
....... .+..+. . .++.+++. .++.+..++..++..+.. .... .+. ..+..+..+.++
T Consensus 94 ~~~~~~~-~p~~~~-----~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 94 TQKTMGA-DPCYLT-----T-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEECSSS-CEEEEE-----E-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EeccCCC-CcEEEE-----E-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 3221111 111111 1 24456665 377888888764332211 1111 000 001223223344
Q ss_pred CeEEEEEecCCceeEEEEEECCCC----c-eeee---eeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecCee
Q 002016 189 DQIYVVGYAGSSQFHAYQINAMNG----E-LLNH---ETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRKI 258 (981)
Q Consensus 189 ~~Vyvvg~~g~~~~~v~aLd~~tG----~-~lw~---~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg~~ 258 (981)
..+|+.+. +...+.++.++..+| + .... .....+.+.....+.. .+..+++.+...+.+.+.++.+|..
T Consensus 167 ~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 167 KYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp SEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 45776554 333556666676666 4 3221 1112221111112222 3346666776678899999988863
No 141
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.5 Score=53.51 Aligned_cols=159 Identities=10% Similarity=0.059 Sum_probs=87.3
Q ss_pred CCCEE-EEEcCCCEEEEEECC--CCccceEEEc-CCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeE----EEe
Q 002016 52 GRKRV-VVSTEENVIASLDLR--HGEIFWRHVL-GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVW----ESF 123 (981)
Q Consensus 52 ~~~~V-yvaT~~g~L~ALd~~--tG~ivWR~~l-~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llW----e~~ 123 (981)
++..+ ++++.+|.|...|.. +|+.+-.... ..+..+..+...-++..+++++.++.++.||..+|+..- ...
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~ 192 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL 192 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee
Confidence 45565 677789999999988 8876655321 111123333222244456656667799999999887543 111
Q ss_pred ccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCcee
Q 002016 124 LRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQF 202 (981)
Q Consensus 124 ~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~ 202 (981)
...... ..+.+.|.. ..+..++.. .|+.+..+|..+|+....+....... +..+..+ .+..++..+.+|
T Consensus 193 ~h~~~v-~~~~~sp~~---~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~s-d~~~l~s~~~d~---- 262 (450)
T 2vdu_B 193 GHVSML-TDVHLIKDS---DGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-VSSICCG-KDYLLLSAGGDD---- 262 (450)
T ss_dssp ECSSCE-EEEEEEECT---TSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-EEEEEEC-STTEEEEEESSS----
T ss_pred cccCce-EEEEEcCCC---CCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-eEEEEEC-CCCEEEEEeCCC----
Confidence 111111 111111100 002234334 48899999999998776643221111 2233323 444554444333
Q ss_pred EEEEEECCCCceeeeeee
Q 002016 203 HAYQINAMNGELLNHETA 220 (981)
Q Consensus 203 ~v~aLd~~tG~~lw~~~v 220 (981)
.+...|..+|+.+.....
T Consensus 263 ~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 263 KIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp EEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCcEeeeecc
Confidence 588899999998876653
No 142
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.74 E-value=0.52 Score=50.80 Aligned_cols=146 Identities=12% Similarity=0.050 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcC-C--CcceeeeeeeecCeEEEEEccCCEEEEEeC---------------
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLG-I--NDVVDGIDIALGKYVITLSSDGSTLRAWNL--------------- 113 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~-~--~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da--------------- 113 (981)
++..+++++.+|.|...|.++++..|....- . ...+..+.....+..++.++.++.++.||.
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 186 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccc
Confidence 4667999999999999998888865543321 1 122333322224445555666779999994
Q ss_pred ---CCCcEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCC
Q 002016 114 ---PDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESD 189 (981)
Q Consensus 114 ---~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~ 189 (981)
.+|+.+-......... ....+. ..+..+++. .+|.+..+|..+|+.+.+........ ..+.. ..++
T Consensus 187 ~~~~~~~~~~~~~~~~~~v-~~~~~~------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~~~~~-~~~~ 256 (372)
T 1k8k_C 187 SKMPFGELMFESSSSCGWV-HGVCFS------ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL--LAVTF-ITES 256 (372)
T ss_dssp SCCCTTCEEEECCCCSSCE-EEEEEC------SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCE--EEEEE-EETT
T ss_pred cccchhhheEecCCCCCeE-EEEEEC------CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCe--EEEEE-ecCC
Confidence 4788877665433222 111121 123355554 49999999999999998887654332 22221 2355
Q ss_pred eEEEEEecCCceeEEEEEECCC
Q 002016 190 QIYVVGYAGSSQFHAYQINAMN 211 (981)
Q Consensus 190 ~Vyvvg~~g~~~~~v~aLd~~t 211 (981)
.+++.+..| . +..+|..+
T Consensus 257 ~~l~~~~d~--~--i~i~~~~~ 274 (372)
T 1k8k_C 257 SLVAAGHDC--F--PVLFTYDS 274 (372)
T ss_dssp EEEEEETTS--S--CEEEEEET
T ss_pred CEEEEEeCC--e--EEEEEccC
Confidence 666666333 2 44455555
No 143
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.73 E-value=2.2 Score=46.95 Aligned_cols=153 Identities=12% Similarity=0.132 Sum_probs=83.4
Q ss_pred CeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccC
Q 002016 96 KYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAA 174 (981)
Q Consensus 96 ~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~ 174 (981)
..+++.++ .++.|+-||..+|+.+.+.....++. ++.+-| .+..++..+++.+..++..+|+..-......
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~--~v~fsp------dg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK--DLHFST------DGKVVAYITGSSLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC--EEEECT------TSSEEEEECSSCEEEEETTTCCEEEEECCCC
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE--EEEEcc------CCceEEeccceeEEEEEeccCcceeeeecCC
Confidence 33444454 46899999999999999987655442 333321 1334444567888889999988765544332
Q ss_pred cceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccC-ceEEE--cCcEEEEEECCCCeEEEE
Q 002016 175 ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG-DVALV--SSDTLVTLDTTRSILVTV 251 (981)
Q Consensus 175 ~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~-~~~~v--g~~~lv~~d~~~g~L~v~ 251 (981)
.......+..+..+..+...+..++....+...|..++...-............ .++-. .+..+++.. .++.+++-
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs-~D~~V~iw 296 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS-NDNSIALV 296 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE-TTSCEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc-CCCEEEEE
Confidence 222233333233444455445555444456666665554332211111111111 11212 334565554 45788888
Q ss_pred EeecCe
Q 002016 252 SFKNRK 257 (981)
Q Consensus 252 ~L~sg~ 257 (981)
++.+++
T Consensus 297 d~~~~~ 302 (365)
T 4h5i_A 297 KLKDLS 302 (365)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 888877
No 144
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=95.67 E-value=0.19 Score=59.22 Aligned_cols=157 Identities=14% Similarity=0.148 Sum_probs=88.9
Q ss_pred CeEEEEEccCCEEEEEeCCCCcEeEEEeccC----------cccc--------CCceeeccccccc-CCcEEEEEe----
Q 002016 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLRG----------SKHS--------KPLLLVPTNLKVD-KDSLILVSS---- 152 (981)
Q Consensus 96 ~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~----------~~~s--------~~~~~v~~~~~~~-~~~~V~V~~---- 152 (981)
..+|++++++|.|+|+|+. |+++|-+--.. +... ...+.+.. .-.. .-..+++..
T Consensus 85 ~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~D-v~~~g~wrtvLvggmg~G 162 (570)
T 3hx6_A 85 APRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVAD-AFFGGAWHTVLIGSLRAG 162 (570)
T ss_dssp CCEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEE-EEETTEEEEEEEEECTTS
T ss_pred ccEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEE-EEeCCcceEEEEEecCCC
Confidence 4688889988999999998 99999975221 0000 01111100 0000 012344432
Q ss_pred CCEEEEEECCC---CcEeEEEeccC-cce-----eeeEEEEeecCCeEEEEEe--cC-CceeEEEEEECCCCceeeeeee
Q 002016 153 KGCLHAVSSID---GEILWTRDFAA-ESV-----EVQQVIQLDESDQIYVVGY--AG-SSQFHAYQINAMNGELLNHETA 220 (981)
Q Consensus 153 ~g~l~aLd~~t---G~~~W~~~~~~-~~~-----~~~~vv~s~~~~~Vyvvg~--~g-~~~~~v~aLd~~tG~~lw~~~v 220 (981)
+..++|||..+ .+++|++.... ..+ .| ++.....+.-+.++|. .. .....|+.+|+.||+++|+..+
T Consensus 163 G~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P-~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~ 241 (570)
T 3hx6_A 163 GKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKP-TVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEV 241 (570)
T ss_dssp CSEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCC-EEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEE
T ss_pred CcEEEEEECCCCCCCceeEEECCCCccccCccccCC-EEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEec
Confidence 55899999876 78999998432 111 12 1221122222222221 11 1246799999999999999865
Q ss_pred ecc----CCccCceEEEc---C---cEEEEEECCCCeEEEEEeecCe
Q 002016 221 AFS----GGFVGDVALVS---S---DTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 221 ~~p----~~~~~~~~~vg---~---~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
... .+++. +.++. + +.+++.|. .|++...||.+..
T Consensus 242 ~~~~~~~~Gls~-~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 242 TGRTGVPNGLSS-PRLADNNSDGVADYAYAGDL-QGNLWRFDLIAGK 286 (570)
T ss_dssp CCSTTSCCCEEE-EEEECTTSSSBCCEEEEEET-TSEEEEEECSCSS
T ss_pred CCCCccCCcccc-ceEEecCCCCceeEEEEEeC-CCcEEEEEcCCCC
Confidence 432 23322 33342 1 26777884 6889888887654
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.66 E-value=2.7 Score=44.37 Aligned_cols=191 Identities=12% Similarity=0.127 Sum_probs=97.9
Q ss_pred CCCEEEEEcCC-CEEEEEECC--CCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCc---EeEEEec
Q 002016 52 GRKRVVVSTEE-NVIASLDLR--HGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQ---MVWESFL 124 (981)
Q Consensus 52 ~~~~VyvaT~~-g~L~ALd~~--tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~---llWe~~~ 124 (981)
+++.+|+++.+ +.|...+.. +|+..=...+.....+..+....++..++++ ..++.++.||..+|. .......
T Consensus 48 dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 48 DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 127 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC
T ss_pred CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC
Confidence 45668888876 888876554 7764322222222122233222334445444 446789999995554 3333332
Q ss_pred cCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCC-CcEeEE----EeccCcceeeeEEEEeecCCeEEEEEec
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSID-GEILWT----RDFAAESVEVQQVIQLDESDQIYVVGYA 197 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~t-G~~~W~----~~~~~~~~~~~~vv~s~~~~~Vyvvg~~ 197 (981)
.... ....+- ..+..+++. .++.+..+|..+ |+..-. .....+. .+..+.....+..+|+.+..
T Consensus 128 ~~~~--~~~~~s------~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 128 LDGC--HSANIS------PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp CTTB--CCCEEC------TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEETT
T ss_pred CCCc--eEEEEC------CCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeCC
Confidence 2211 122222 123456665 489999999987 865422 2222221 23334333445557776533
Q ss_pred CCceeEEEEEEC--CCCceeeeeeee-ccCCccC-----ceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 198 GSSQFHAYQINA--MNGELLNHETAA-FSGGFVG-----DVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 198 g~~~~~v~aLd~--~tG~~lw~~~v~-~p~~~~~-----~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
.+ .+..+|. .+|+......+. .+.+..+ .+.+- .+..+++.+...+.+.+.++.
T Consensus 199 ~~---~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 199 NS---SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TT---EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CC---EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 32 4666666 567664333332 2322211 12222 234666666667888888887
No 146
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.65 E-value=1.1 Score=47.15 Aligned_cols=111 Identities=14% Similarity=0.136 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEc--C-CCcceeeeeeee--cCeEEEEEccCCEEEEEeCCCC---------c
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVL--G-INDVVDGIDIAL--GKYVITLSSDGSTLRAWNLPDG---------Q 117 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l--~-~~~~i~~l~~~~--~~~vV~Vs~~g~~V~A~da~tG---------~ 117 (981)
++..+++++.+|.|.-.|..++...|+... . ....+..+.... ++..++.++.++.|+.||..+| +
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 101 (351)
T 3f3f_A 22 YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWN 101 (351)
T ss_dssp SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEE
T ss_pred CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcc
Confidence 466799999999999999999887776532 1 112233332112 2455555666779999999998 3
Q ss_pred EeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEe
Q 002016 118 MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEIL 167 (981)
Q Consensus 118 llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~ 167 (981)
.+.......... ....+.+ ...+..++.. .+|.+..+|..+|+..
T Consensus 102 ~~~~~~~~~~~v-~~~~~~~----~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 102 KLCTLNDSKGSL-YSVKFAP----AHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp EEEEECCCSSCE-EEEEECC----GGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred eeeeecccCCce-eEEEEcC----CCCCcEEEEecCCCcEEEecCCChHHh
Confidence 444444333222 1111211 0003344444 4899999999998854
No 147
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.60 E-value=0.82 Score=50.51 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=90.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC--C--cceeeeee-eecCeEEEEEccCCEEEEEeCC-CCcEeEEEeccC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI--N--DVVDGIDI-ALGKYVITLSSDGSTLRAWNLP-DGQMVWESFLRG 126 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~--~--~~i~~l~~-~~~~~vV~Vs~~g~~V~A~da~-tG~llWe~~~~~ 126 (981)
+..+++++.++.|.-.|.++|+.+....... . ..+..+.. ..++..++.++.++.|+.||.. +++.+-......
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 4469999999999999999999876553221 1 11222211 1244555556667899999987 456555554443
Q ss_pred ccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcce-----eeeEEEEeecCCeEEEEEecCCc
Q 002016 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV-----EVQQVIQLDESDQIYVVGYAGSS 200 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~-----~~~~vv~s~~~~~Vyvvg~~g~~ 200 (981)
... ....+.| .+..++.. .||.+...|..+|+.+-.+....... ....+..+..+. ..+.|...+
T Consensus 250 ~~v-~~v~~~p------~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg- 320 (380)
T 3iz6_a 250 GDI-NSVKFFP------DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNG- 320 (380)
T ss_dssp SCC-CEEEECT------TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTS-
T ss_pred CCe-EEEEEec------CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCC-
Confidence 322 2222221 13334444 49999999999999887765432110 011222122344 444444333
Q ss_pred eeEEEEEECCCCceeeee
Q 002016 201 QFHAYQINAMNGELLNHE 218 (981)
Q Consensus 201 ~~~v~aLd~~tG~~lw~~ 218 (981)
.+...|..+|+.+...
T Consensus 321 --~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 321 --DCYVWDTLLAEMVLNL 336 (380)
T ss_dssp --CEEEEETTTCCEEEEE
T ss_pred --CEEEEECCCCceEEEE
Confidence 4888899999877554
No 148
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.60 E-value=0.85 Score=51.41 Aligned_cols=188 Identities=14% Similarity=0.078 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCC---EEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEcc--CCEEEEEeCCCCcEeEEEecc
Q 002016 52 GRKRVVVSTEEN---VIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSD--GSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 52 ~~~~VyvaT~~g---~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~--g~~V~A~da~tG~llWe~~~~ 125 (981)
+++.+++++.++ .|...|.++|+..- .......+..+... .+..+++.++. ...|+.||..+|+.. +....
T Consensus 189 dg~~la~~s~~~~~~~i~~~d~~tg~~~~--l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~ 265 (415)
T 2hqs_A 189 DGSKLAYVTFESGRSALVIQTLANGAVRQ--VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDG 265 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEEE--EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCC
T ss_pred CCCEEEEEEecCCCcEEEEEECCCCcEEE--eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCC
Confidence 466677777664 99999999998742 22222222222112 34445545443 246999999999863 11111
Q ss_pred CccccCCceeecccccccCCcEEEEEe--CC--EEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCce
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVSS--KG--CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQ 201 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g--~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~ 201 (981)
.... ..+.+. ..+..+++.+ +| .|+.+|..+|+..-- ..... ....+..+.++..+++.+..++ .
T Consensus 266 ~~~~-~~~~~s------pdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l-~~~~~--~~~~~~~spdG~~l~~~~~~~g-~ 334 (415)
T 2hqs_A 266 RSNN-TEPTWF------PDSQNLAFTSDQAGRPQVYKVNINGGAPQRI-TWEGS--QNQDADVSSDGKFMVMVSSNGG-Q 334 (415)
T ss_dssp SSCE-EEEEEC------TTSSEEEEEECTTSSCEEEEEETTSSCCEEC-CCSSS--EEEEEEECTTSSEEEEEEECSS-C
T ss_pred CCcc-cceEEC------CCCCEEEEEECCCCCcEEEEEECCCCCEEEE-ecCCC--cccCeEECCCCCEEEEEECcCC-c
Confidence 1111 111111 1133444443 33 788999888874321 11111 1222322345556666554432 3
Q ss_pred eEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCC--eEEEEEeecCe
Q 002016 202 FHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRS--ILVTVSFKNRK 257 (981)
Q Consensus 202 ~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g--~L~v~~L~sg~ 257 (981)
..+..+|+.+|+... +...... ..+.+. .+..+++...+.+ .+++.++..+.
T Consensus 335 ~~i~~~d~~~~~~~~---l~~~~~~-~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 335 QHIAKQDLATGGVQV---LSSTFLD-ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEEEETTTCCEEE---CCCSSSC-EEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred eEEEEEECCCCCEEE---ecCCCCc-CCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 468899999998732 1111111 112222 2334444433333 67777776443
No 149
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.58 E-value=0.36 Score=49.95 Aligned_cols=145 Identities=10% Similarity=0.042 Sum_probs=77.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++.+|+++..+.|..+|+.+ ...+...........++ ....++.++++ ..++.|+.||..++...+. ...... .
T Consensus 77 ~g~l~v~~~~~~i~~~d~~~-~~~~~~~~~~~~~p~~i-~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~--~~~~~~-~ 151 (270)
T 1rwi_B 77 AGTVYVTDFNNRVVTLAAGS-NNQTVLPFDGLNYPEGL-AVDTQGAVYVADRGNNRVVKLAAGSKTQTVL--PFTGLN-D 151 (270)
T ss_dssp TCCEEEEETTTEEEEECTTC-SCCEECCCCSCSSEEEE-EECTTCCEEEEEGGGTEEEEECTTCCSCEEC--CCCSCC-S
T ss_pred CCCEEEEcCCCEEEEEeCCC-ceEeeeecCCcCCCcce-EECCCCCEEEEECCCCEEEEEECCCceeEee--ccccCC-C
Confidence 56699998888999999854 44454332221122233 12223445554 4457899998665544332 111110 1
Q ss_pred CceeecccccccCCcEEEEEe--CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 132 PLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
+..+. .+.++.+++.. ++.|+.+|..++...... .... ..+..+. ...++.+|+....++ .+..+|.
T Consensus 152 p~~i~-----~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~-~~p~~i~-~d~~g~l~v~~~~~~---~v~~~~~ 220 (270)
T 1rwi_B 152 PDGVA-----VDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-FTDI-TAPWGIA-VDEAGTVYVTEHNTN---QVVKLLA 220 (270)
T ss_dssp CCCEE-----ECTTCCEEEEEGGGTEEEEECTTTCCEEECC-CSSC-CSEEEEE-ECTTCCEEEEETTTS---CEEEECT
T ss_pred ceeEE-----EeCCCCEEEEECCCCEEEEEecCCCceEeec-ccCC-CCceEEE-ECCCCCEEEEECCCC---cEEEEcC
Confidence 11111 12344577753 689999998877654321 1111 1233342 234568888665433 4888888
Q ss_pred CCCc
Q 002016 210 MNGE 213 (981)
Q Consensus 210 ~tG~ 213 (981)
.++.
T Consensus 221 ~~~~ 224 (270)
T 1rwi_B 221 GSTT 224 (270)
T ss_dssp TCSC
T ss_pred CCCc
Confidence 6543
No 150
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.46 E-value=0.59 Score=49.39 Aligned_cols=147 Identities=8% Similarity=0.020 Sum_probs=75.1
Q ss_pred CCEEEEE--------cCCCEEEEEECCCCccceEEEcC----CCcceeeeeeeecC-eEEEEEccCCEEEEEeCCCCcEe
Q 002016 53 RKRVVVS--------TEENVIASLDLRHGEIFWRHVLG----INDVVDGIDIALGK-YVITLSSDGSTLRAWNLPDGQMV 119 (981)
Q Consensus 53 ~~~Vyva--------T~~g~L~ALd~~tG~ivWR~~l~----~~~~i~~l~~~~~~-~vV~Vs~~g~~V~A~da~tG~ll 119 (981)
++.+|++ +.++.|..+|+++|+.. +.... ....+.++ ....+ +.+++++.++.|+.||.. |+..
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i-~~~~~~g~l~v~~~~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGC-QCDRDANQLFVADMRLGLLVVQTD-GTFE 104 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEE-EECSSSSEEEEEETTTEEEEEETT-SCEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceE-EEecCCCcEEEEECCCCEEEEeCC-CCEE
Confidence 5678888 67889999999999853 12221 00112233 12233 455555544589999998 8875
Q ss_pred EE-EeccCcc-ccCCceeecccccccCCcEEEEEe--C---------------CEEEEEECCCCcEeEEEeccCcceeee
Q 002016 120 WE-SFLRGSK-HSKPLLLVPTNLKVDKDSLILVSS--K---------------GCLHAVSSIDGEILWTRDFAAESVEVQ 180 (981)
Q Consensus 120 We-~~~~~~~-~s~~~~~v~~~~~~~~~~~V~V~~--~---------------g~l~aLd~~tG~~~W~~~~~~~~~~~~ 180 (981)
.- ....... ......+. .+.++.+++.. + +.|+.+|.. |+......... .+.
T Consensus 105 ~~~~~~~~~~~~~~~~~i~-----~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---~~~ 175 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGCNDCA-----FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ---FPN 175 (314)
T ss_dssp ECCSBCTTSCBCBCCCEEE-----ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES---SEE
T ss_pred EEEeccCCCccccCCcCEE-----ECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC---Ccc
Confidence 33 2211110 00011111 13345566653 3 689999877 77654322111 122
Q ss_pred EEEEe----ecCCeEEEEEecCCceeEEEEEECC-CCce
Q 002016 181 QVIQL----DESDQIYVVGYAGSSQFHAYQINAM-NGEL 214 (981)
Q Consensus 181 ~vv~s----~~~~~Vyvvg~~g~~~~~v~aLd~~-tG~~ 214 (981)
.+... .+++.+|+....++ .+..+|.. +|+.
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~---~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTK---KLWSYDIKGPAKI 211 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTT---EEEEEEEEETTEE
T ss_pred eEEEecccCCCCCEEEEEECCCC---eEEEEECCCCCcc
Confidence 23222 12225776544332 47777765 5654
No 151
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.36 E-value=0.26 Score=54.23 Aligned_cols=191 Identities=9% Similarity=0.019 Sum_probs=106.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCc------cceEEEc--CCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEe
Q 002016 53 RKRVVVSTEENVIASLDLRHGE------IFWRHVL--GINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~------ivWR~~l--~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~ 123 (981)
+..+++++.+|.|...|.++++ ...+... .....+..+... .++..++.++.++.|+.||..+|+.+.+..
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 5678999999999999999997 4443211 111223333212 224566666777899999999999998887
Q ss_pred ccC------ccccCCceeecccccccCCcEEEEE-eCC---EEEEEECCCC-cEeEEEe-ccCcceeeeEEEEeecCCeE
Q 002016 124 LRG------SKHSKPLLLVPTNLKVDKDSLILVS-SKG---CLHAVSSIDG-EILWTRD-FAAESVEVQQVIQLDESDQI 191 (981)
Q Consensus 124 ~~~------~~~s~~~~~v~~~~~~~~~~~V~V~-~~g---~l~aLd~~tG-~~~W~~~-~~~~~~~~~~vv~s~~~~~V 191 (981)
... ... ....+.| +....++.. .++ .+..+|..++ +...... ..... +..+..+..++..
T Consensus 206 ~~~~~~~~~~~v-~~~~~~~-----~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 206 YTSPNSGIKQQL-SVVEWHP-----KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG--ILSLDWCHQDEHL 277 (416)
T ss_dssp CCCCSSCCCCCE-EEEEECS-----SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC--EEEEEECSSCSSC
T ss_pred ccccccccCCce-EEEEECC-----CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc--eeEEEeCCCCCCe
Confidence 652 111 1111111 112244444 366 8999999887 4444443 22111 2223222323444
Q ss_pred EEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cC-cEEEEEECCCCeEEEEEeecCe
Q 002016 192 YVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SS-DTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 192 yvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~-~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
++.+...+ .+...|..+|+.+.+..... ..+. .+.+. .+ ..+++.. .++.+++-++.++.
T Consensus 278 l~s~~~dg---~v~~wd~~~~~~~~~~~~~~-~~v~-~~~~s~~~~~~l~s~~-~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 278 LLSSGRDN---TVLLWNPESAEQLSQFPARG-NWCF-KTKFAPEAPDLFACAS-FDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEEESSS---EEEEECSSSCCEEEEEECSS-SCCC-CEEECTTCTTEEEECC-SSSEEEEEESCCCC
T ss_pred EEEEeCCC---CEEEeeCCCCccceeecCCC-CceE-EEEECCCCCCEEEEEe-cCCcEEEEEccCCC
Confidence 44343322 58888999998886653211 1121 22222 22 3555443 45788888887654
No 152
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.35 E-value=4 Score=44.34 Aligned_cols=151 Identities=10% Similarity=0.079 Sum_probs=88.0
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCC--cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN--DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~--~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
+..+++++.+|.|.-.|.+++ ..-....... ..+..+....++..++.++.++.|+.||. +|+.++.........
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v- 207 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV- 207 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE-
T ss_pred CCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE-
Confidence 356888999999999998853 3333322221 12333322234455555666789999998 799998887654332
Q ss_pred CCceeecccccccCCc-EEEEE-eCCEEEEEECCC----CcEeEEEeccCcceeeeEEEEee-cCCeEEEEEecCCceeE
Q 002016 131 KPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSID----GEILWTRDFAAESVEVQQVIQLD-ESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~-~V~V~-~~g~l~aLd~~t----G~~~W~~~~~~~~~~~~~vv~s~-~~~~Vyvvg~~g~~~~~ 203 (981)
..+.+.| .+. .++.. .||.+..+|..+ +...-....... ...+..+. .+..++..+.+| .
T Consensus 208 ~~~~~~~------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~~l~~~~~d~----~ 274 (383)
T 3ei3_B 208 THAEFNP------RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP---VNAAYFNPTDSTKLLTTDQRN----E 274 (383)
T ss_dssp EEEEECS------SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC---EEEEEECTTTSCEEEEEESSS----E
T ss_pred EEEEECC------CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc---eEEEEEcCCCCCEEEEEcCCC----c
Confidence 1222221 133 44444 489999999998 666655533222 22232223 334444333333 5
Q ss_pred EEEEECCCCceeeeee
Q 002016 204 AYQINAMNGELLNHET 219 (981)
Q Consensus 204 v~aLd~~tG~~lw~~~ 219 (981)
+...|+.+|+......
T Consensus 275 i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 275 IRVYSSYDWSKPDQII 290 (383)
T ss_dssp EEEEETTBTTSCSEEE
T ss_pred EEEEECCCCccccccc
Confidence 8888999998875543
No 153
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.65 Score=52.53 Aligned_cols=72 Identities=14% Similarity=0.204 Sum_probs=51.8
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
+..+++++.++.|...|.++|+.+.+........+..+... ++..++.++.++.|+.||..+|+.+-.....
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 44688899999999999999987766433333334444233 5556655666789999999999998887653
No 154
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.22 E-value=0.43 Score=50.87 Aligned_cols=183 Identities=6% Similarity=-0.007 Sum_probs=99.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCc----cceEEEcCCCcceeeeeeeecCe-EEEEEccCCEEEEEeC-CCCcEeEEEec-
Q 002016 52 GRKRVVVSTEENVIASLDLRHGE----IFWRHVLGINDVVDGIDIALGKY-VITLSSDGSTLRAWNL-PDGQMVWESFL- 124 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~----ivWR~~l~~~~~i~~l~~~~~~~-vV~Vs~~g~~V~A~da-~tG~llWe~~~- 124 (981)
+++.+++++.+|.|...|..+|+ ....... ...+..+.....+. .++.++.++.|+.||. .+|+.. ....
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~ 98 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ-ALTNN 98 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC--SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE-ECBSC
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeeec--CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE-ecccc
Confidence 35679999999999999999888 4443322 22243332223455 5665666779999999 888762 2221
Q ss_pred -cCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCC---------CcEeEEEeccCcceeeeEEEEeecCCeEEE
Q 002016 125 -RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID---------GEILWTRDFAAESVEVQQVIQLDESDQIYV 193 (981)
Q Consensus 125 -~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~t---------G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (981)
..... ..+.+. . ++.++.. .+|.+..+|..+ ++.+++...... +..+ ...++.+++
T Consensus 99 ~~~~~v-~~l~~~------~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---v~~~--~~~~~~l~~ 165 (342)
T 1yfq_A 99 EANLGI-CRICKY------G-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK---IFTM--DTNSSRLIV 165 (342)
T ss_dssp CCCSCE-EEEEEE------T-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCC---EEEE--EECSSEEEE
T ss_pred CCCCce-EEEEeC------C-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCc---eEEE--EecCCcEEE
Confidence 11111 111111 1 3445554 488999998887 666655542221 2222 234555554
Q ss_pred EEecCCceeEEEEEECCC-Cceeeeeeee-ccCCccCceEEE--cCcEEEEEECCCCeEEEEEeecC
Q 002016 194 VGYAGSSQFHAYQINAMN-GELLNHETAA-FSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 194 vg~~g~~~~~v~aLd~~t-G~~lw~~~v~-~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
.+..| .+..+|..+ +......... .+..+. .+.+. .+..+++.. ..|.+.+-++..+
T Consensus 166 ~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 166 GMNNS----QVQWFRLPLCEDDNGTIEESGLKYQIR-DVALLPKEQEGYACSS-IDGRVAVEFFDDQ 226 (342)
T ss_dssp EESTT----EEEEEESSCCTTCCCEEEECSCSSCEE-EEEECSGGGCEEEEEE-TTSEEEEEECCTT
T ss_pred EeCCC----eEEEEECCccccccceeeecCCCCcee-EEEECCCCCCEEEEEe-cCCcEEEEEEcCC
Confidence 44333 588889988 7654332211 111111 11221 234555554 4577777666654
No 155
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.21 E-value=1.8 Score=46.52 Aligned_cols=185 Identities=5% Similarity=-0.063 Sum_probs=95.9
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeeec-CeEEEEEcc------------------CCEEEE
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALG-KYVITLSSD------------------GSTLRA 110 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~~-~~vV~Vs~~------------------g~~V~A 110 (981)
++.+|+++..+.|..+|+.+|++..-....... ....+ .... ++.++++.. .+.|+.
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i-~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAV-TVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEE-EECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceE-EEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 678999987777999999887642211111110 01123 1233 455666532 257999
Q ss_pred EeCCCCcEeEEE-eccCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCCC---cEeEEEeccCcceeeeEEEE
Q 002016 111 WNLPDGQMVWES-FLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDG---EILWTRDFAAESVEVQQVIQ 184 (981)
Q Consensus 111 ~da~tG~llWe~-~~~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG---~~~W~~~~~~~~~~~~~vv~ 184 (981)
+|+.+|+..--. .+..+ .++.+- ..++.++|. .+++|++++..++ ...--...+. |..+.
T Consensus 170 ~d~~~~~~~~~~~~~~~p---~gia~~------~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~- 235 (322)
T 2fp8_A 170 YDPSTKETTLLLKELHVP---GGAEVS------ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN----PGNIK- 235 (322)
T ss_dssp EETTTTEEEEEEEEESCC---CEEEEC------TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS----EEEEE-
T ss_pred EeCCCCEEEEeccCCccC---cceEEC------CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC----CCCeE-
Confidence 999888753221 11111 111111 123457775 3689999998753 3221112211 33442
Q ss_pred eecCCeEEEEEecC-------CceeEEEEEECCCCceeeeeeeeccCC--ccC-ceEEEcCcEEEEEECCCCeEEEEEee
Q 002016 185 LDESDQIYVVGYAG-------SSQFHAYQINAMNGELLNHETAAFSGG--FVG-DVALVSSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 185 s~~~~~Vyvvg~~g-------~~~~~v~aLd~~tG~~lw~~~v~~p~~--~~~-~~~~vg~~~lv~~d~~~g~L~v~~L~ 254 (981)
...++.+|+..... +....+..+|+ +|+.+-... .+.+ +.. ..+...++.++..+..++.+.+.++.
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~--~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIP--LPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEE--CCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEE--CCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 23567788876541 11346889998 588775543 3322 122 22222455555565555666666665
Q ss_pred c
Q 002016 255 N 255 (981)
Q Consensus 255 s 255 (981)
.
T Consensus 313 ~ 313 (322)
T 2fp8_A 313 K 313 (322)
T ss_dssp -
T ss_pred c
Confidence 4
No 156
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.21 E-value=2.9 Score=44.43 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=74.9
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++.+|+.+ ..+.|..+|+++|+.. ...+.. .+.++....++. ++++. ++.|+.||.++|+...-.......
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~--~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~--- 95 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDA--PVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDNDK--- 95 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE-EEECSS--CEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCTTC---
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEeCCC--ceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCCCC---
Confidence 56666665 5789999999998762 122222 233342222333 45555 458999999999876544432110
Q ss_pred CceeecccccccCCcEEEEEe-------------CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecC
Q 002016 132 PLLLVPTNLKVDKDSLILVSS-------------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~~-------------~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g 198 (981)
.. ..+.....+.++.+++.. .+.|++++.. |+..-..... ..+..+..+.++..+|+.....
T Consensus 96 ~~-~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~---~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 96 KN-NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQV---DISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp SS-EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEE---SBEEEEEECTTSCEEEEEEGGG
T ss_pred CC-CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecc---ccccceEEcCCCCEEEEecCCC
Confidence 00 000001113344466632 2478888864 5432211110 0122332233455688765433
Q ss_pred CceeEEEEEE--CCCCceee
Q 002016 199 SSQFHAYQIN--AMNGELLN 216 (981)
Q Consensus 199 ~~~~~v~aLd--~~tG~~lw 216 (981)
+ ++..+| +.+|....
T Consensus 171 ~---~i~~~~~d~~~G~~~~ 187 (297)
T 3g4e_A 171 Y---SVDAFDYDLQTGQISN 187 (297)
T ss_dssp T---EEEEEEECTTTCCEEE
T ss_pred C---cEEEEeccCCCCcccC
Confidence 2 355555 47887643
No 157
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.18 E-value=1.7 Score=47.50 Aligned_cols=72 Identities=10% Similarity=0.123 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
++..+.+++++| +.-.|..+++...+..... +...... .++.++++++.++.|+.||..+|+.+-+.....+
T Consensus 30 dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~ 102 (355)
T 3vu4_A 30 DQSCLILSTLKS-FEIYNVHPVAHIMSQEMRH---LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAP 102 (355)
T ss_dssp TSSEEEEECSSE-EEEEEETTEEEEEEEECSC---CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSC
T ss_pred CCCEEEEEcCCE-EEEEecCCcceeeeeecCC---eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCc
Confidence 355566677666 5577888888888776542 1112112 3444545566667999999999999988876554
No 158
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.17 E-value=3.5 Score=44.06 Aligned_cols=146 Identities=11% Similarity=0.083 Sum_probs=79.9
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc--c-CCEEEEEeCCCCcEeEEEeccCcc
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS--D-GSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~--~-g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
++++|+++ ..+.|..+|+.++ ..-...+.. ...++. ...++.++|+. . +..+..+|..+|++..-.......
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~--~p~gia-~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGN-QQIHATVEG--KVSGLA-FTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCC-EEEEEECSS--EEEEEE-ECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred CCCEEEEeCCCCeEEEECCCCc-eEEEEeCCC--CceeEE-EcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence 56799997 6789999998654 332223322 233442 22233345543 2 236889999999976544432211
Q ss_pred ccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCc-EeEEEec------cCcce-eeeEEEEeecCCeEEEEEecC
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGE-ILWTRDF------AAESV-EVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~-~~W~~~~------~~~~~-~~~~vv~s~~~~~Vyvvg~~g 198 (981)
...+.. . ..++.+++. .+|.|+.+|..+|+ .+|.... ....+ .+..+ +.+++.+|+.....
T Consensus 118 ~~~g~~-~------~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 118 FLNGIT-P------LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp CEEEEE-E------SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred ccCccc-c------cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 100110 0 124456665 38999999998875 3453321 11111 13333 44667888865443
Q ss_pred CceeEEEEEECCC-Cce
Q 002016 199 SSQFHAYQINAMN-GEL 214 (981)
Q Consensus 199 ~~~~~v~aLd~~t-G~~ 214 (981)
+ ++..+|... |+.
T Consensus 189 ~---~I~~~~~~~~g~~ 202 (306)
T 2p4o_A 189 M---LLLRIPVDSTDKP 202 (306)
T ss_dssp T---EEEEEEBCTTSCB
T ss_pred C---EEEEEEeCCCCCC
Confidence 3 578888764 543
No 159
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.08 E-value=4.5 Score=43.36 Aligned_cols=161 Identities=10% Similarity=0.109 Sum_probs=88.3
Q ss_pred cCCCEEEEEcCC-----C-------EEEEEECCCCccceEEEcCCCcc-e-eeeeeeecCeEEEEEccC-------CEEE
Q 002016 51 TGRKRVVVSTEE-----N-------VIASLDLRHGEIFWRHVLGINDV-V-DGIDIALGKYVITLSSDG-------STLR 109 (981)
Q Consensus 51 ~~~~~VyvaT~~-----g-------~L~ALd~~tG~ivWR~~l~~~~~-i-~~l~~~~~~~vV~Vs~~g-------~~V~ 109 (981)
..++.||+.... + .+..+|+.++ .|+..-+.+.. . .+. ...++.++++||.. ..+.
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLPPLPSARCLFGL-GEVDDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECSCBSSCBCSCEE-EEETTEEEEEEEEBTTTCCEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECCCCCccccccce-EEECCEEEEEcCccCCCCcccceEE
Confidence 346677776552 1 2889999887 49875332211 1 122 23567777777642 3588
Q ss_pred EEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeC--------CEEEEEECCCCcEeEEEeccCcce-eee
Q 002016 110 AWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSK--------GCLHAVSSIDGEILWTRDFAAESV-EVQ 180 (981)
Q Consensus 110 A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~--------g~l~aLd~~tG~~~W~~~~~~~~~-~~~ 180 (981)
.+|..++ .|+.-..-+.. ... +..+..++.+++.++ ..+..+|..++ .|+.-.+.+.- ...
T Consensus 131 ~yd~~~~--~W~~~~~~p~~-----r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~ 200 (318)
T 2woz_A 131 CYDPVAA--KWSEVKNLPIK-----VYG-HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSMF 200 (318)
T ss_dssp EEETTTT--EEEEECCCSSC-----EES-CEEEEETTEEEEECCEESSSCBCCCEEEEETTTT--EEEEECCCSSCCBSC
T ss_pred EEeCCCC--CEeECCCCCCc-----ccc-cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCC--EEEECCCCCCCcccc
Confidence 8998876 48765322110 110 111112456666531 34899999887 48875432211 011
Q ss_pred EEEEeecCCeEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccC
Q 002016 181 QVIQLDESDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG 228 (981)
Q Consensus 181 ~vv~s~~~~~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~ 228 (981)
.+ ...++.+|++|-.... .-.+..+|+.+++ |+..-..|.....
T Consensus 201 ~~--~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~ 246 (318)
T 2woz_A 201 GV--AIHKGKIVIAGGVTEDGLSASVEAFDLKTNK--WEVMTEFPQERSS 246 (318)
T ss_dssp EE--EEETTEEEEEEEEETTEEEEEEEEEETTTCC--EEECCCCSSCCBS
T ss_pred eE--EEECCEEEEEcCcCCCCccceEEEEECCCCe--EEECCCCCCcccc
Confidence 12 2357888888753221 2357789998874 8775444544433
No 160
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.07 E-value=3.2 Score=43.92 Aligned_cols=190 Identities=14% Similarity=0.135 Sum_probs=102.2
Q ss_pred CCEEEEEcC-------CCEEEEEECCCCccceEEEcCCCcc-eeeeeeeecCeEEEEEccC-----CEEEEEeCCCCc-E
Q 002016 53 RKRVVVSTE-------ENVIASLDLRHGEIFWRHVLGINDV-VDGIDIALGKYVITLSSDG-----STLRAWNLPDGQ-M 118 (981)
Q Consensus 53 ~~~VyvaT~-------~g~L~ALd~~tG~ivWR~~l~~~~~-i~~l~~~~~~~vV~Vs~~g-----~~V~A~da~tG~-l 118 (981)
++.||+... .+.+.++|+.+++ |+..-..+.. .....+..++.++++||.+ ..+..+|..+++ .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQE--WSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCe--EEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666554 2579999999885 9875432211 1111123566677767642 469999999886 5
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeEEEeccCc--ceeeeEEEEeecCC
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAE--SVEVQQVIQLDESD 189 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W~~~~~~~--~~~~~~vv~s~~~~ 189 (981)
.|+.-...+.. . . .+....-++.+++.+ -..+..+|..+++ |+.-.+.+ .... .+ ...++
T Consensus 92 ~W~~~~~~p~~---r--~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~-~~--~~~~~ 160 (301)
T 2vpj_A 92 VWYSVAPMNVR---R--G-LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--WSMLGDMQTAREGA-GL--VVASG 160 (301)
T ss_dssp CCEEECCCSSC---C--B-SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--EEEEEECSSCCBSC-EE--EEETT
T ss_pred eeEECCCCCCC---c--c-ceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe--EEECCCCCCCcccc-eE--EEECC
Confidence 58765332211 0 0 001111245667653 2468899988764 77543322 1111 11 23578
Q ss_pred eEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECC----CCeEEEEEeecCe
Q 002016 190 QIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTT----RSILVTVSFKNRK 257 (981)
Q Consensus 190 ~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~----~g~L~v~~L~sg~ 257 (981)
.+|++|-..+. .-.+..+|+.++ .|+..-..|...... +...++.+++..-.. ...+.+.|+.+++
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 89987643211 124888999876 677654445444442 333343333332111 2356777777665
No 161
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.87 E-value=0.98 Score=55.26 Aligned_cols=194 Identities=15% Similarity=0.102 Sum_probs=99.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeec--CeEEEEEccCCEEEEEeCCCCc--EeEEEeccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQ--MVWESFLRG 126 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~--~~vV~Vs~~g~~V~A~da~tG~--llWe~~~~~ 126 (981)
+++.+++++.+|.|.-.|..++...-...+... ..+..+..... +..++.++.++.|+.||..+|+ .........
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 99 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC
Confidence 356799999999999999885543333444322 23444422122 4455556667799999999997 444444332
Q ss_pred ccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcE--eEEEeccCcceeeeEEEEee-------------cCCe
Q 002016 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI--LWTRDFAAESVEVQQVIQLD-------------ESDQ 190 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~--~W~~~~~~~~~~~~~vv~s~-------------~~~~ 190 (981)
..+ ....+.| ...+..+++. .+|.+..+|..++.. ........... ..+.... .+..
T Consensus 100 ~~V-~~v~~sp----~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v--~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 100 ASV-NSVQWAP----HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV--NSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp SCE-EEEEECC----GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCE--EEEEECCCC---------CGGGCC
T ss_pred CCe-EEEEECC----CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCce--EEEEecCcccccccccccCCCCCE
Confidence 222 1111111 0003344444 489999999988842 22222221111 1121111 2334
Q ss_pred EEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccC--ceEEE-c---CcEEEEEECCCCeEEEEEeecCe
Q 002016 191 IYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG--DVALV-S---SDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 191 Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~--~~~~v-g---~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
++..+.+| .+...|..+|...+.........-.. .+.+. . +..+++.. .+|.+++-++.++.
T Consensus 173 l~sgs~dg----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 173 FVTGGADN----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEEETTS----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-SSSCEEEEEESSSS
T ss_pred EEEEECCC----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe-cCCEEEEecCCCCC
Confidence 44433333 37777877776554432222111111 11221 2 34555555 46788888888764
No 162
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.87 E-value=3.8 Score=43.01 Aligned_cols=64 Identities=9% Similarity=-0.069 Sum_probs=38.8
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEE
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWES 122 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~ 122 (981)
.+++.+..+.|..+|+.+| .+.-......+.++. ...++.++++. .++.|+.||+.+|+...-.
T Consensus 42 l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~-~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHC-LNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEE-ECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred EEEEeCCCCEEEEEECCCC---eEEEECCCCCcceee-ECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 3556678899999999988 222222222233441 22333344444 3478999999999876543
No 163
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.86 E-value=2.1 Score=48.05 Aligned_cols=191 Identities=12% Similarity=0.004 Sum_probs=98.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC-Ccceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~-~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
+..|.+++.+|.|.-.|..+|+..=...+.. .+.+..+... .++..++.++.++.|+.||..++..............
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~ 211 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIW 211 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCcc
Confidence 4468899999999999998887654444322 2334444222 2344555466678999999987766544443322110
Q ss_pred -CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 131 -KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 131 -~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
....+- ..+..++.. .+|.+..+|.. |+.+++........ ..+.....+..+++.+..++ .+...|
T Consensus 212 ~~~~~~~------~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v--~~v~~~p~~~~~~~s~s~d~---~v~iwd 279 (435)
T 4e54_B 212 FCSLDVS------ASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKV--THVALNPCCDWFLATASVDQ---TVKIWD 279 (435)
T ss_dssp CCCEEEE------TTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCE--EEEEECTTCSSEEEEEETTS---BCCEEE
T ss_pred EEEEEEC------CCCCEEEEEeCCCcEeeeccC-cceeEEEecccceE--EeeeecCCCceEEEEecCcc---eeeEEe
Confidence 111111 123344444 48888888864 55555443322221 22221223344444443322 356668
Q ss_pred CCCCceeeeeeeecc--CCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 209 AMNGELLNHETAAFS--GGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p--~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+.+++..-....... ..+.. +.+- .+..++... .++.+++-++.++.
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~-~~~spdg~~l~s~~-~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNA-ACFSPDGARLLTTD-QKSEIRVYSASQWD 329 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEE-CCBCTTSSEEEEEE-SSSCEEEEESSSSS
T ss_pred cccccccceEEEeeeccccccc-eeECCCCCeeEEEc-CCCEEEEEECCCCc
Confidence 777664432211110 11110 1111 234555554 45788888888876
No 164
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.84 E-value=1.8 Score=47.96 Aligned_cols=68 Identities=9% Similarity=0.191 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCcc-------ceE--EEcCCC-------------cceeeeeeeecC--eEEEEEccCCE
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEI-------FWR--HVLGIN-------------DVVDGIDIALGK--YVITLSSDGST 107 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~i-------vWR--~~l~~~-------------~~i~~l~~~~~~--~vV~Vs~~g~~ 107 (981)
+++.+++++.+|.|.-.|..+|+. .|+ ..+... ..+..+...-.+ ..++.++.++.
T Consensus 39 ~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~ 118 (447)
T 3dw8_B 39 SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118 (447)
T ss_dssp SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSC
T ss_pred CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCe
Confidence 467799999999999999998872 221 112111 123333111222 35555666789
Q ss_pred EEEEeCCCCcEe
Q 002016 108 LRAWNLPDGQMV 119 (981)
Q Consensus 108 V~A~da~tG~ll 119 (981)
|+.||..++...
T Consensus 119 i~iw~~~~~~~~ 130 (447)
T 3dw8_B 119 IKLWKISERDKR 130 (447)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEecccccCC
Confidence 999999887664
No 165
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.83 E-value=9.3 Score=45.76 Aligned_cols=109 Identities=10% Similarity=0.004 Sum_probs=59.8
Q ss_pred cCCCEEEEEcC-CC-----EEEEEECCCCccceEEEcCCCc-----------------------ceeeeeeeecCeEEEE
Q 002016 51 TGRKRVVVSTE-EN-----VIASLDLRHGEIFWRHVLGIND-----------------------VVDGIDIALGKYVITL 101 (981)
Q Consensus 51 ~~~~~VyvaT~-~g-----~L~ALd~~tG~ivWR~~l~~~~-----------------------~i~~l~~~~~~~vV~V 101 (981)
.+++.|++++. +| .|...|..+|+..-........ .+..+...-++..++.
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 125 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLF 125 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEE
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEE
Confidence 35667888887 77 8999999999854333221110 0122211223334443
Q ss_pred EccCCEEEEEeCCCC---cEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeE
Q 002016 102 SSDGSTLRAWNLPDG---QMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILW 168 (981)
Q Consensus 102 s~~g~~V~A~da~tG---~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W 168 (981)
++. +.|+.||..+| +..- ........ ....+- ..++.++...++.|+.+|..+|+..-
T Consensus 126 ~~~-~~i~~~d~~~~~~~~~~~-l~~~~~~~-~~~~~S------PDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 126 PLG-GELYLYDLKQEGKAAVRQ-LTHGEGFA-TDAKLS------PKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp EET-TEEEEEESSSCSTTSCCB-CCCSSSCE-EEEEEC------TTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EeC-CcEEEEECCCCCcceEEE-cccCCccc-ccccCC------CCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 443 69999999988 4431 11111111 111111 12344555578899999999987653
No 166
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.69 E-value=4.3 Score=43.37 Aligned_cols=187 Identities=16% Similarity=0.156 Sum_probs=97.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee------ecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA------LGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~------~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
.+..++.++.+|.|.-.|.+ |+.+-+. ......+..+... .++..++.++.++.++.||..+++..-+....
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~-~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h 195 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIK-GQCLATL-LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH 195 (319)
T ss_dssp TSCEEEEEETTSCEEEEETT-SCEEEEE-CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEECC-CCeEEEE-eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC
Confidence 35678888999999988875 3333222 1111222222111 12224444566789999999999887666544
Q ss_pred CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
.... ....+- ..+..++.. .||.+...|..+|+.+.+.....+ ...+..+ .++..++.+..++ +
T Consensus 196 ~~~v-~~~~~s------p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---v~~~~~s-p~~~~la~~~~~~----i 260 (319)
T 3frx_A 196 NSNI-NTLTAS------PDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE---VFSLAFS-PNRYWLAAATATG----I 260 (319)
T ss_dssp CSCE-EEEEEC------TTSSEEEEEETTCEEEEEETTTTEEEEEEECCSC---EEEEEEC-SSSSEEEEEETTE----E
T ss_pred CCcE-EEEEEc------CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCc---EEEEEEc-CCCCEEEEEcCCC----c
Confidence 3322 111111 113344444 499999999999999988865432 2223222 2333344343332 4
Q ss_pred EEEECCCCceeeeeeeeccC---CccC---ceEEE-cCcEEEEEECCCCeEEEEEeecC
Q 002016 205 YQINAMNGELLNHETAAFSG---GFVG---DVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p~---~~~~---~~~~v-g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
..++..++..+....-.... .... .+.+- .+..+++.. .++.+++-++.++
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~-~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 261 KVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY-TDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEEC
T ss_pred EEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee-cCceEEEEEEeec
Confidence 55566666655444211110 0011 11111 334555554 3567777666554
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=94.66 E-value=6.2 Score=43.00 Aligned_cols=156 Identities=12% Similarity=0.115 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCCEEEEEECC-CCccceEEEcCCCcceeeeeeeecCe--EEEEEc-------------cCCEEEEEeCC-
Q 002016 52 GRKRVVVSTEENVIASLDLR-HGEIFWRHVLGINDVVDGIDIALGKY--VITLSS-------------DGSTLRAWNLP- 114 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~-tG~ivWR~~l~~~~~i~~l~~~~~~~--vV~Vs~-------------~g~~V~A~da~- 114 (981)
+++.+|+++.+ .|..+|.. +|+..........+....+...-++. .++++. .++.++.|+..
T Consensus 50 dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~ 128 (365)
T 1jof_A 50 ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE 128 (365)
T ss_dssp TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT
T ss_pred CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC
Confidence 45679998887 89999987 89875433221111111121122334 233332 46789999986
Q ss_pred CCcEeEEEec---cCccccCCceeecccccccCCcEEEEEe--CCEEEEEECC-CCcEeE--EEeccCcceeeeEEEEee
Q 002016 115 DGQMVWESFL---RGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI-DGEILW--TRDFAAESVEVQQVIQLD 186 (981)
Q Consensus 115 tG~llWe~~~---~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~-tG~~~W--~~~~~~~~~~~~~vv~s~ 186 (981)
+|++.=.... ........+.+- ..++.+++.. ++.++.++.. +|+..- +...+.....+..+..+.
T Consensus 129 ~g~~~~~~~~~~~~~~~~~~~~~~s------pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 129 TGKLEKNVQNYEYQENTGIHGMVFD------PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp TCCEEEEEEEEECCTTCCEEEEEEC------TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred CCcCcceEeeEEeCCCCcceEEEEC------CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 6876532221 111110111111 1234566653 6789999988 898643 222221112245554344
Q ss_pred cCCeEEEEEecCCceeEEEEEECCCCcee
Q 002016 187 ESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 187 ~~~~Vyvvg~~g~~~~~v~aLd~~tG~~l 215 (981)
++..+|+.+..+ ..+.++.+|..+|+..
T Consensus 203 dg~~l~v~~~~~-~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 203 TGNYLYALMEAG-NRICEYVIDPATHMPV 230 (365)
T ss_dssp TSSEEEEEETTT-TEEEEEEECTTTCCEE
T ss_pred CCCEEEEEECCC-CeEEEEEEeCCCCcEE
Confidence 555777755433 3455666677789865
No 168
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.64 E-value=2.7 Score=45.06 Aligned_cols=185 Identities=14% Similarity=0.068 Sum_probs=97.2
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeeecCeEEEEEcc-----C------CEEEEEeCCCCcEeE
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALGKYVITLSSD-----G------STLRAWNLPDGQMVW 120 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~~~~vV~Vs~~-----g------~~V~A~da~tG~llW 120 (981)
.+|+-.. +.+.++|+.+++ |+. .+.+. ......+..++.++++||. + ..+..+|+.+++ |
T Consensus 6 ~l~~~GG-~~~~~yd~~~~~--W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W 79 (315)
T 4asc_A 6 LIFMISE-EGAVAYDPAANE--CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--W 79 (315)
T ss_dssp EEEEEET-TEEEEEETTTTE--EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--E
T ss_pred EEEEEcC-CceEEECCCCCe--Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe--E
Confidence 3444444 679999999987 985 22211 1111112346667766762 1 138899998875 8
Q ss_pred EEeccCccccCCceeecccccccCCcEEEEEeC----------CEEEEEECCCCcEeEEEeccCccee-eeEEEEeecCC
Q 002016 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSK----------GCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESD 189 (981)
Q Consensus 121 e~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~----------g~l~aLd~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~ 189 (981)
+.-..-+. +. . .+....-++.+++.++ ..+..+|..++ .|+.-.+.+.-. ...+ ...++
T Consensus 80 ~~~~~~p~---~r--~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~ 149 (315)
T 4asc_A 80 LGMPPLPS---PR--C-LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLPYVVYGHTV--LSHMD 149 (315)
T ss_dssp EECCCBSS---CE--E-SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCSSCCBSCEE--EEETT
T ss_pred EECCCCCc---ch--h-ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCCCcccceeE--EEECC
Confidence 65422111 11 0 0111112456777532 35889999887 488754422210 1111 24678
Q ss_pred eEEEEEecC---CceeEEEEEECCCCceeeeeeeeccCCccC-ceEEEcCcEEEEEECCC----CeEEEEEeecCe
Q 002016 190 QIYVVGYAG---SSQFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTTR----SILVTVSFKNRK 257 (981)
Q Consensus 190 ~Vyvvg~~g---~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~~~----g~L~v~~L~sg~ 257 (981)
.+|++|-.+ ...-.+..+|+.+. .|+..-..|..... .+...++.+++..-... ..+.+.|+.+++
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 899887541 11135888998876 58775445544444 23333444444322111 145566666654
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.64 E-value=6.9 Score=43.44 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEe-EEEeccCcccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMV-WESFLRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~ll-We~~~~~~~~s 130 (981)
++..+++++.+|.|.-.|.++|+.+....-... .+..+ ..++..++.++.++.++.||..+.... ..........
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~-~v~~~--s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~- 233 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV- 233 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE-
T ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC-ceEEE--eeCCCEEEEEeCCCceeEeeecccceeeEEecccccce-
Confidence 467799999999999999999998877543222 23233 334455555666789999998765443 3333222211
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEE----EeccCcceeeeEEEEeecCCeEEEEEecCCceeEEE
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWT----RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~----~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~ 205 (981)
...... ..+..++.. .||.+...+..+|+..+. ........ ..+.....+..+++.+. |+.+..+.
T Consensus 234 ~~~~~~------~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V--~~~~~~p~~~~~la~~~-gs~D~~I~ 304 (420)
T 4gga_A 234 CGLRWA------PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV--KAVAWCPWQSNVLATGG-GTSDRHIR 304 (420)
T ss_dssp EEEEEC------TTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE--EEEEECTTCTTEEEEEE-CTTTCEEE
T ss_pred eeeeec------CCCCeeeeeeccccceEEeeccccccceeeeeecccCCce--eeeeeCCCcccEEEEEe-ecCCCEEE
Confidence 011111 123334444 488888888888764322 11111111 11211223444443332 22234677
Q ss_pred EEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEE-CCCCeEEEEEeecCe
Q 002016 206 QINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLD-TTRSILVTVSFKNRK 257 (981)
Q Consensus 206 aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d-~~~g~L~v~~L~sg~ 257 (981)
..|..+|+.+..... ...+.. +.+. .++.+++.. ..++.+++-++.+++
T Consensus 305 iwd~~t~~~~~~~~~--~~~v~~-~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 305 IWNVCSGACLSAVDA--HSQVCS-ILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp EEETTTTEEEEEEEC--SSCEEE-EEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred EEeCCccccceeecc--ccceee-eeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 789999998876632 222211 2222 334444443 345788888888776
No 170
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.62 E-value=3.3 Score=44.30 Aligned_cols=197 Identities=10% Similarity=0.007 Sum_probs=102.5
Q ss_pred eeeecccCCCEEEEEcC-----CCEEEEEECCCCccceEEEcCCCcc-eeeeeeeecCeEEEEEcc----C-----CEEE
Q 002016 45 VFHTQKTGRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDV-VDGIDIALGKYVITLSSD----G-----STLR 109 (981)
Q Consensus 45 ~f~~~~~~~~~VyvaT~-----~g~L~ALd~~tG~ivWR~~l~~~~~-i~~l~~~~~~~vV~Vs~~----g-----~~V~ 109 (981)
..+++...++.||+... .+.+.++|+.+++ |+..-..+.. .....+..++.++++||. . +.+.
T Consensus 16 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 93 (308)
T 1zgk_A 16 RGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGT--WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALD 93 (308)
T ss_dssp -----CCCCCCEEEECCBSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEE
T ss_pred CCccccCCCCEEEEEeCcCCCCcceEEEEcCCCCe--EeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEE
Confidence 34445455677777665 3579999999885 9875322211 111112356667776664 1 3589
Q ss_pred EEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeEEEeccCcce-eeeE
Q 002016 110 AWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAESV-EVQQ 181 (981)
Q Consensus 110 A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~ 181 (981)
.+|..+++ |+.....+.. . . ......-++.+++.+ -..+..+|..++ .|+.-.+.+.- ....
T Consensus 94 ~~d~~~~~--W~~~~~~p~~---r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~ 163 (308)
T 1zgk_A 94 CYNPMTNQ--WSPCAPMSVP---R--N-RIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPMLTRRIGVG 163 (308)
T ss_dssp EEETTTTE--EEECCCCSSC---C--B-TCEEEEETTEEEEECCEETTEECCCEEEEETTTT--EEEECCCCSSCCBSCE
T ss_pred EECCCCCe--EeECCCCCcC---c--c-ccEEEEECCEEEEEcCCCCCcccccEEEECCCCC--eEeECCCCCccccceE
Confidence 99998874 8765322111 0 0 001111245566653 145888888876 58765432211 0111
Q ss_pred EEEeecCCeEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECC----CCeEEEEEee
Q 002016 182 VIQLDESDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTT----RSILVTVSFK 254 (981)
Q Consensus 182 vv~s~~~~~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~----~g~L~v~~L~ 254 (981)
+ ...++.+|++|-..+. .-.+..+|+.++ .|+..-..|...... +.+.++.+++..-.. ...+.+.|+.
T Consensus 164 ~--~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 164 V--AVLNRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp E--EEETTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred E--EEECCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCC
Confidence 1 2347889988653311 134888998776 577644444444332 333343333332110 2356777777
Q ss_pred cCe
Q 002016 255 NRK 257 (981)
Q Consensus 255 sg~ 257 (981)
+++
T Consensus 240 ~~~ 242 (308)
T 1zgk_A 240 TET 242 (308)
T ss_dssp TTE
T ss_pred CCc
Confidence 665
No 171
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.61 E-value=5.1 Score=45.11 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=79.5
Q ss_pred CCCEEEEEcCC-CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEcc-CC-EEEEEeCCCCcEeEEE-eccC-
Q 002016 52 GRKRVVVSTEE-NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD-GS-TLRAWNLPDGQMVWES-FLRG- 126 (981)
Q Consensus 52 ~~~~VyvaT~~-g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~-g~-~V~A~da~tG~llWe~-~~~~- 126 (981)
.++.||+++.. +.|..+|+++|.+.-....... .. +.....++.++++.. ++ .++.||..+|...-.. ....
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~--~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG--GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETCCB--CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC--Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccch
Confidence 36778888764 7899999988876433222111 11 211233445555544 33 8999999877653222 1111
Q ss_pred -ccccCCceeecccccccC-CcEEEEE-eCCEEEEEECCCCcEeEEEecc---Ccceeee-EEEEeecCCeEEEEEecCC
Q 002016 127 -SKHSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGEILWTRDFA---AESVEVQ-QVIQLDESDQIYVVGYAGS 199 (981)
Q Consensus 127 -~~~s~~~~~v~~~~~~~~-~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~---~~~~~~~-~vv~s~~~~~Vyvvg~~g~ 199 (981)
.....+..+ +. ++.+++. .+++++++|..+|......... .....|. .+.....++.+|+.....+
T Consensus 217 ~~~~p~~iav-------~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 217 FSGKIGAVAL-------DETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp SCSCCCBCEE-------CTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred hcCCcEEEEE-------eCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 111011111 22 5667775 4789999999998754432111 1111223 3432234688888654333
Q ss_pred ceeEEEEEECCCCc
Q 002016 200 SQFHAYQINAMNGE 213 (981)
Q Consensus 200 ~~~~v~aLd~~tG~ 213 (981)
++..+|.. |+
T Consensus 290 ---~I~~~~~~-g~ 299 (409)
T 3hrp_A 290 ---SVYKITPD-GE 299 (409)
T ss_dssp ---EEEEECTT-CC
T ss_pred ---EEEEEecC-CC
Confidence 57778764 44
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.59 E-value=0.82 Score=49.91 Aligned_cols=72 Identities=11% Similarity=-0.005 Sum_probs=43.0
Q ss_pred cCCCEEEEEcC-CC--EEEEEECCCCccceEEEcCCCc-ceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 51 TGRKRVVVSTE-EN--VIASLDLRHGEIFWRHVLGIND-VVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 51 ~~~~~VyvaT~-~g--~L~ALd~~tG~ivWR~~l~~~~-~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
.+++.|++++. +| .|..+|+++|+.. +.+.... ........ .+..+++.+ .++.++.||..+|+..--....
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTEGRGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCCSSCBCSSSCEECTTSSEEEEEE-TTTEEEEEETTTCCEEEEEECC
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCceE--EeeeCCCCCccceEEcCCCCEEEEEe-CCCeEEEEECCCCcceeeeech
Confidence 34566666665 56 5999999999864 2232221 11111112 344455544 4569999999999876555544
No 173
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.58 E-value=9.8 Score=46.38 Aligned_cols=152 Identities=10% Similarity=0.095 Sum_probs=84.4
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEc-----CCC---cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEec
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVL-----GIN---DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l-----~~~---~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~ 124 (981)
++.++++|..+-|..+|++++...+-... ... ..+..+ ....++.+.+++.++.|..+|..+++..+-.
T Consensus 323 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i-~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~-- 399 (781)
T 3v9f_A 323 FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSV-CDDGQGKLWIGTDGGGINVFENGKRVAIYNK-- 399 (781)
T ss_dssp SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEE-EECTTSCEEEEEBSSCEEEEETTEEEEECC---
T ss_pred CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEE-EEcCCCCEEEEeCCCcEEEEECCCCeEEEcc--
Confidence 56799999888899999988765432111 111 112233 2344566777775556999999877654421
Q ss_pred cCccccCCceeecccccccCCcEEEEEe-CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V~~-~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
....++...... ...+.++.+.+.+ ++.|+.+|.++|+...-.....+...+..+. ...++.+++.+. ++
T Consensus 400 ~~~~~~~~~v~~---i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~-~d~~g~lwigt~-~G---- 470 (781)
T 3v9f_A 400 ENRELLSNSVLC---SLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFY-EDKNKKIWIGTH-AG---- 470 (781)
T ss_dssp ----CCCSBEEE---EEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEE-ECTTSEEEEEET-TE----
T ss_pred CCCCCCCcceEE---EEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEE-ECCCCCEEEEEC-Cc----
Confidence 111110111100 0113355677765 5889999999987543221111111122222 235778888665 32
Q ss_pred EEEEECCCCceee
Q 002016 204 AYQINAMNGELLN 216 (981)
Q Consensus 204 v~aLd~~tG~~lw 216 (981)
+..+|..+|+...
T Consensus 471 l~~~~~~~~~~~~ 483 (781)
T 3v9f_A 471 VFVIDLASKKVIH 483 (781)
T ss_dssp EEEEESSSSSCCE
T ss_pred eEEEeCCCCeEEe
Confidence 8999999887654
No 174
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.56 E-value=1.9 Score=51.89 Aligned_cols=192 Identities=13% Similarity=0.059 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.+|.|.-.|..+|+...+..-... .+..+....++..++.++.++.|+.||.. |...+...........
T Consensus 441 ~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 441 DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK-DVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRD 518 (694)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECSSTTSCSS
T ss_pred CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEECC-CCcceeeccCCCCCCC
Confidence 466799999999999999999988766543222 23333222233444445566799999975 4445544322211101
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
....+.- .+......++.. .||.+...|..+++..-+........ ..+..+. ++..++.+...+ .+...|..
T Consensus 519 ~v~~~~~-~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v--~~v~~sp-dg~~l~sg~~Dg---~i~iwd~~ 591 (694)
T 3dm0_A 519 WVSCVRF-SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV--STVAVSP-DGSLCASGGKDG---VVLLWDLA 591 (694)
T ss_dssp CEEEEEE-CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECT-TSSEEEEEETTS---BCEEEETT
T ss_pred cEEEEEE-eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE--EEEEEeC-CCCEEEEEeCCC---eEEEEECC
Confidence 1111100 000111233333 48999999999998877665433322 2222122 334444343332 47788999
Q ss_pred CCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|+.+.+... ...+. .+.+- .+..+++.. .+.+++-++.+++
T Consensus 592 ~~~~~~~~~~--~~~v~-~~~~sp~~~~l~~~~--~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 592 EGKKLYSLEA--NSVIH-ALCFSPNRYWLCAAT--EHGIKIWDLESKS 634 (694)
T ss_dssp TTEEEECCBC--SSCEE-EEEECSSSSEEEEEE--TTEEEEEETTTTE
T ss_pred CCceEEEecC--CCcEE-EEEEcCCCcEEEEEc--CCCEEEEECCCCC
Confidence 9998766532 21121 12222 223444443 3568888888876
No 175
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.53 E-value=5.4 Score=41.74 Aligned_cols=187 Identities=10% Similarity=0.082 Sum_probs=93.5
Q ss_pred CEEEEEcCCCEEEEEECCCCccceE-EEcCCCc---ceeeeeeeecCeEEEEEcc-C---------------CEEEEEeC
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWR-HVLGIND---VVDGIDIALGKYVITLSSD-G---------------STLRAWNL 113 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR-~~l~~~~---~i~~l~~~~~~~vV~Vs~~-g---------------~~V~A~da 113 (981)
+++|+++..+.|..+|++ |+...- ....... .+..+ ....++.++++.. + +.|+.+|.
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i-~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDC-AFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEE-EECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCE-EECCCCCEEEEecCcccccccccccccCCCCeEEEECC
Confidence 789999987789999998 875422 1111110 12233 1223344444432 2 47999998
Q ss_pred CCCcEeEEEeccCccccCCceeecccccccCCc-EEEEE--eCCEEEEEECC-CCcE----eEEEeccCcc-eeeeEEEE
Q 002016 114 PDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDS-LILVS--SKGCLHAVSSI-DGEI----LWTRDFAAES-VEVQQVIQ 184 (981)
Q Consensus 114 ~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~-~V~V~--~~g~l~aLd~~-tG~~----~W~~~~~~~~-~~~~~vv~ 184 (981)
. |+........... ....+. ...+.++ .+++. .+++|+.+|.+ +|+. .+.. .+... ..+..+.
T Consensus 161 ~-g~~~~~~~~~~~~--~~i~~~---~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~i~- 232 (314)
T 1pjx_A 161 D-GQMIQVDTAFQFP--NGIAVR---HMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH-IPGTHEGGADGMD- 232 (314)
T ss_dssp T-SCEEEEEEEESSE--EEEEEE---ECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE-CCCCSSCEEEEEE-
T ss_pred C-CCEEEeccCCCCc--ceEEEe---cccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE-CCCCCCCCCCceE-
Confidence 6 8765432211110 111111 0001233 56665 36899999876 6653 2221 11111 1133332
Q ss_pred eecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeec
Q 002016 185 LDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (981)
Q Consensus 185 s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~s 255 (981)
...++.+|+....++ .+..+|+.+|+.+.... .+......+.+- .++.+++.+..++.+...++..
T Consensus 233 ~d~~G~l~v~~~~~~---~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 233 FDEDNNLLVANWGSS---HIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EBTTCCEEEEEETTT---EEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ECCCCCEEEEEcCCC---EEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 235678888665433 58899999898775543 221111112221 1233444554445666666553
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.42 E-value=1.1 Score=47.24 Aligned_cols=137 Identities=14% Similarity=0.128 Sum_probs=75.2
Q ss_pred CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCC-CCcE-eEEEecc-CccccCCceeecc
Q 002016 62 ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP-DGQM-VWESFLR-GSKHSKPLLLVPT 138 (981)
Q Consensus 62 ~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~-tG~l-lWe~~~~-~~~~s~~~~~v~~ 138 (981)
.+.|+.+|+. |+.. ..........++....++..++....++.|+.||.. +|++ .=...+. .......+ .
T Consensus 152 ~~~l~~~~~~-g~~~--~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i-~--- 224 (296)
T 3e5z_A 152 GRWVFRLAPD-GTLS--APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL-R--- 224 (296)
T ss_dssp SCEEEEECTT-SCEE--EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE-E---
T ss_pred CcEEEEECCC-CCEE--EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE-E---
Confidence 4578888876 6542 212211112233122234455434456799999986 7876 1111111 11110111 1
Q ss_pred cccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccCcceeeeEEEE-eecCCeEEEEEecCCceeEEEEEECCCCceeee
Q 002016 139 NLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQ-LDESDQIYVVGYAGSSQFHAYQINAMNGELLNH 217 (981)
Q Consensus 139 ~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~-s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~ 217 (981)
.+.++.+++..++.|..+|.+ |+....+..+.. +..+.. ...++.+|+.+. + .++.++++++++...
T Consensus 225 ---~d~~G~l~v~~~~~v~~~~~~-g~~~~~~~~~~~---~~~~~f~~~d~~~L~v~t~-~----~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 225 ---VDAGGLIWASAGDGVHVLTPD-GDELGRVLTPQT---TSNLCFGGPEGRTLYMTVS-T----EFWSIETNVRGLEHH 292 (296)
T ss_dssp ---EBTTSCEEEEETTEEEEECTT-SCEEEEEECSSC---CCEEEEESTTSCEEEEEET-T----EEEEEECSCCBCCC-
T ss_pred ---ECCCCCEEEEcCCeEEEECCC-CCEEEEEECCCC---ceeEEEECCCCCEEEEEcC-C----eEEEEEccccccccc
Confidence 134556777679999999986 888877776544 223322 124456777553 3 389999998887643
No 177
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.42 E-value=1.2 Score=49.15 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=69.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
.++.++.++.+|.|.-.|.+.+...-+.-......+..+...-++..++.++.++.++.||..+|+.+-.+.........
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 35678889999999999988543333322222223333322223345554666789999999999988766543221100
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~ 171 (981)
..+.+..-.-...+..++.. .+|.++..|..+|+......
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~ 337 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG 337 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe
Confidence 00000000000124445554 58999999999998877663
No 178
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.29 E-value=5.2 Score=42.35 Aligned_cols=188 Identities=14% Similarity=0.132 Sum_probs=99.2
Q ss_pred CCEEEEEcCC-----CEEEEEECCCCccceEEEcCCCcc-ee-eeeeeecCeEEEEEccC-----CEEEEEeCCCCcEeE
Q 002016 53 RKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDV-VD-GIDIALGKYVITLSSDG-----STLRAWNLPDGQMVW 120 (981)
Q Consensus 53 ~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l~~~~~-i~-~l~~~~~~~vV~Vs~~g-----~~V~A~da~tG~llW 120 (981)
++.||+.... +.+.++|+.+++ |+..-+.+.. .. .. +..++.++++||.+ ..+..+|+.+++ |
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W 89 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEER--WHQVAELPSRRCRAGM-VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--W 89 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEE-EEETTEEEEESCBCSSSBCCCEEEEETTTTE--E
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCc--EeEcccCCcccccceE-EEECCEEEEEeCcCCCccccceEEECCCCCc--e
Confidence 4456665542 568999999885 9886332211 11 22 24566777777632 358999998775 8
Q ss_pred EEeccCccccCCceeecccccccCCcEEEEEe--C-----CEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCeEE
Q 002016 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K-----GCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIY 192 (981)
Q Consensus 121 e~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~-----g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vy 192 (981)
+.-..-+.. . . .+....-++.+++.+ + ..+..+|..++ .|+.-.+.+.- ....+ ...++.+|
T Consensus 90 ~~~~~~p~~---r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~~iy 159 (302)
T 2xn4_A 90 TSVANMRDR---R--S-TLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPMNTRRSSVGV--GVVGGLLY 159 (302)
T ss_dssp EEECCCSSC---C--B-SCEEEEETTEEEEEEEECSSCEEEEEEEEETTTT--EEEEECCCSSCCBSCEE--EEETTEEE
T ss_pred eeCCCCCcc---c--c-ceEEEEECCEEEEEcCCCCCccCceEEEEeCCCC--eEeecCCCCCcccCceE--EEECCEEE
Confidence 765332211 0 0 001111245566642 2 36788888876 48765432221 01111 23578899
Q ss_pred EEEecCCc----eeEEEEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECC----CCeEEEEEeecCe
Q 002016 193 VVGYAGSS----QFHAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTT----RSILVTVSFKNRK 257 (981)
Q Consensus 193 vvg~~g~~----~~~v~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~----~g~L~v~~L~sg~ 257 (981)
++|-..+. .-.+..+|+.++ .|+..-..|...... +.+.++.+++..-.+ ...+.+.|+.+++
T Consensus 160 v~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 160 AVGGYDVASRQCLSTVECYNATTN--EWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EECCEETTTTEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EEeCCCCCCCccccEEEEEeCCCC--cEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 87643111 124788998876 477654445444442 223343333332110 2356777776665
No 179
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.26 E-value=4.1 Score=45.60 Aligned_cols=181 Identities=7% Similarity=-0.141 Sum_probs=104.5
Q ss_pred CCCEEEEEcCC-C----EEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc----------cCCEEEEEeCCCC
Q 002016 52 GRKRVVVSTEE-N----VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLPDG 116 (981)
Q Consensus 52 ~~~~VyvaT~~-g----~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~----------~g~~V~A~da~tG 116 (981)
...++||.... + .|..+|+.|++++=+..+.... ++...-++..++|+. .++.|..||+.++
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P---~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS---LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC---EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC---ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 35689999875 3 8899999999999877765541 332233555666664 2468999999999
Q ss_pred cEeEEEeccCcc------ccCCceeecccccccCCcEEEEEe---CCEEEE--EECCCCcEeEEEeccCcceeeeEEEEe
Q 002016 117 QMVWESFLRGSK------HSKPLLLVPTNLKVDKDSLILVSS---KGCLHA--VSSIDGEILWTRDFAAESVEVQQVIQL 185 (981)
Q Consensus 117 ~llWe~~~~~~~------~s~~~~~v~~~~~~~~~~~V~V~~---~g~l~a--Ld~~tG~~~W~~~~~~~~~~~~~vv~s 185 (981)
+++.+..+.++. .+....+- ..++.+||.. +..+.. +|..+ +-+...+.. . .+.
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~S------pDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-~---~~~-- 171 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNC------ASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-F---HIH-- 171 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEEC------TTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-C---CCE--
T ss_pred CEEEEEECCCccccccCCCcceEEEc------CCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-e---EEc--
Confidence 999999876211 10111111 1245677753 456777 88877 334433221 1 111
Q ss_pred ecCCeEEEEEecCCceeEEEEEECCC-----CceeeeeeeeccCCccC-ceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 186 DESDQIYVVGYAGSSQFHAYQINAMN-----GELLNHETAAFSGGFVG-DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 186 ~~~~~Vyvvg~~g~~~~~v~aLd~~t-----G~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+...|+ +..+. .++..+|..+ |+..|..+ ....+.. ....-.++.+++++. +.++++|+.++.
T Consensus 172 p~g~~~~~-~~~~d--g~~~~vd~~~~~~~~~~v~~~~t--~~i~vg~~P~~~~~~~~~~~vs~--~~V~viD~~~~~ 242 (368)
T 1mda_H 172 PGAAATHY-LGSCP--ASLAASDLAAAPAAAGIVGAQCT--GAQNCSSQAAQANYPGMLVWAVA--SSILQGDIPAAG 242 (368)
T ss_dssp EEETTEEE-CCCCT--TSCEEEECCSSCCCCEECCCCSC--TTSCBCSCCEEETTTTEEEECBS--SCCEEEECCSSC
T ss_pred cCCCeEEE-EEcCC--CCEEEEECccccccCCeEEEEee--eeeeCCCCccccccCCEEEEEcC--CEEEEEECCCCc
Confidence 23444554 22221 1367788887 88777432 0001101 111223345556654 789999987643
No 180
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.25 E-value=2.9 Score=46.85 Aligned_cols=187 Identities=13% Similarity=-0.017 Sum_probs=98.3
Q ss_pred CEEEEEcCCCEEEEEECCC----------CccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcE-eEE
Q 002016 54 KRVVVSTEENVIASLDLRH----------GEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQM-VWE 121 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~t----------G~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~l-lWe 121 (981)
..+++++.+|.|...|..+ ++...+..-... .+.++... .+.+.++.++.++.|+.||..+|.. .+.
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC-CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 4588888999999999887 566665543322 23333111 2333666577778999999988543 121
Q ss_pred ------EeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCC---cEeEEEeccCcceeeeEEEEeecCCeE
Q 002016 122 ------SFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDG---EILWTRDFAAESVEVQQVIQLDESDQI 191 (981)
Q Consensus 122 ------~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG---~~~W~~~~~~~~~~~~~vv~s~~~~~V 191 (981)
........ ....+.| ..+..++.. .+|.|..+|..++ +..+......... ..+.....+..+
T Consensus 221 ~~~~~~~~~h~~~v-~~v~~~p-----~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v--~~i~~~p~~~~~ 292 (430)
T 2xyi_A 221 IDAKNIFTGHTAVV-EDVAWHL-----LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV--NCLSFNPYSEFI 292 (430)
T ss_dssp EECSEEECCCSSCE-EEEEECS-----SCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE--EEEEECSSCTTE
T ss_pred eccceeecCCCCCE-eeeEEeC-----CCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe--EEEEeCCCCCCE
Confidence 11111111 1111111 123333333 4999999999988 5667665433222 223222334445
Q ss_pred EEEEecCCceeEEEEEECCC-CceeeeeeeeccCCccCceEEE--cCcEEEEEECCCCeEEEEEeec
Q 002016 192 YVVGYAGSSQFHAYQINAMN-GELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKN 255 (981)
Q Consensus 192 yvvg~~g~~~~~v~aLd~~t-G~~lw~~~v~~p~~~~~~~~~v--g~~~lv~~d~~~g~L~v~~L~s 255 (981)
++.|...+ .+..+|..+ ++++...... ...+. .+.+. +..++++.. ..+.+.+-++.+
T Consensus 293 l~tg~~dg---~v~vwd~~~~~~~~~~~~~h-~~~v~-~i~~sp~~~~~l~s~~-~d~~i~iwd~~~ 353 (430)
T 2xyi_A 293 LATGSADK---TVALWDLRNLKLKLHSFESH-KDEIF-QVQWSPHNETILASSG-TDRRLHVWDLSK 353 (430)
T ss_dssp EEEEETTS---EEEEEETTCTTSCSEEEECC-SSCEE-EEEECSSCTTEEEEEE-TTSCCEEEEGGG
T ss_pred EEEEeCCC---eEEEEeCCCCCCCeEEeecC-CCCEE-EEEECCCCCCEEEEEe-CCCcEEEEeCCC
Confidence 65554433 588889887 4444433211 11111 11111 223455444 457888888876
No 181
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.22 E-value=4.5 Score=45.41 Aligned_cols=188 Identities=12% Similarity=0.096 Sum_probs=92.4
Q ss_pred CCEEEEEcCC------CEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccC--CEEEEEeCCCCcEeEEEe
Q 002016 53 RKRVVVSTEE------NVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDG--STLRAWNLPDGQMVWESF 123 (981)
Q Consensus 53 ~~~VyvaT~~------g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g--~~V~A~da~tG~llWe~~ 123 (981)
+++++.++++ +.|...|...+.+ +........+..+... .+..+++++.++ ..|+.||..+|+..--..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~--~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ--FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC--EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC--EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence 4565555443 7899999875443 2222222222222112 445566655432 589999999998863322
Q ss_pred ccCccccCCceeecccccccCCcEEEE-Ee---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCC
Q 002016 124 LRGSKHSKPLLLVPTNLKVDKDSLILV-SS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGS 199 (981)
Q Consensus 124 ~~~~~~s~~~~~v~~~~~~~~~~~V~V-~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~ 199 (981)
..... ..+.+-| + +..+++ .. +..|+.+|..+|+..--. ..... ...+..+.++..+++.+..++
T Consensus 221 ~~~~~--~~~~~sp-----d-g~~la~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~--~~~~~~spdg~~l~~~s~~~g 289 (415)
T 2hqs_A 221 FPRHN--GAPAFSP-----D-GSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSN--NTEPTWFPDSQNLAFTSDQAG 289 (415)
T ss_dssp CSSCE--EEEEECT-----T-SSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSC--EEEEEECTTSSEEEEEECTTS
T ss_pred CCCcc--cCEEEcC-----C-CCEEEEEEecCCCceEEEEECCCCCEEeCc-CCCCc--ccceEECCCCCEEEEEECCCC
Confidence 22211 1111111 1 333443 32 346999999998863211 11111 222222334555665554332
Q ss_pred ceeEEEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECC--CCeEEEEEeecCe
Q 002016 200 SQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTT--RSILVTVSFKNRK 257 (981)
Q Consensus 200 ~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~--~g~L~v~~L~sg~ 257 (981)
...++.+|+.+|+... +.........+.+- .+..+++.... ...+++.++.++.
T Consensus 290 -~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 290 -RPQVYKVNINGGAPQR---ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp -SCEEEEEETTSSCCEE---CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred -CcEEEEEECCCCCEEE---EecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 3468889999887432 11111100112221 33455554433 2367777877766
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.19 E-value=2.7 Score=50.44 Aligned_cols=190 Identities=13% Similarity=0.089 Sum_probs=101.4
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceE---EEcCC-CcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWR---HVLGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR---~~l~~-~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
.+.+++++.+|.|...|..+++..+. ..+.. ...+..+....++..++.++.++.|+.||..+|+...+.......
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 45688999999999999887765542 22222 122333322234445554666789999999999998887655433
Q ss_pred ccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccC-cce-eeeEEEEeecC--CeEEEEEecCCceeE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAA-ESV-EVQQVIQLDES--DQIYVVGYAGSSQFH 203 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~-~~~-~~~~vv~s~~~--~~Vyvvg~~g~~~~~ 203 (981)
+ ....+.+ .+..++.. .|+.+...|... ...+...... +.. ....+..+... ..++..+.+| .
T Consensus 475 v-~~~~~s~------~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~----~ 542 (694)
T 3dm0_A 475 V-LSVAFSL------DNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK----T 542 (694)
T ss_dssp E-EEEEECT------TSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS----C
T ss_pred E-EEEEEeC------CCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC----e
Confidence 2 1222221 13334444 488888888643 3444443221 111 11112111122 2333333333 3
Q ss_pred EEEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 204 AYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 204 v~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+...|..+++......-.. ..+. .+.+- .+..+++.. .++.+++-++.+++
T Consensus 543 v~vwd~~~~~~~~~~~~h~-~~v~-~v~~spdg~~l~sg~-~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 543 VKVWNLSNCKLRSTLAGHT-GYVS-TVAVSPDGSLCASGG-KDGVVLLWDLAEGK 594 (694)
T ss_dssp EEEEETTTCCEEEEECCCS-SCEE-EEEECTTSSEEEEEE-TTSBCEEEETTTTE
T ss_pred EEEEECCCCcEEEEEcCCC-CCEE-EEEEeCCCCEEEEEe-CCCeEEEEECCCCc
Confidence 7778998887765432110 1111 12221 234555554 46888888888876
No 183
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.09 E-value=12 Score=44.04 Aligned_cols=151 Identities=12% Similarity=0.091 Sum_probs=81.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEc------CCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVL------GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l------~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
++..+..++.+|.|.-.|.++|+..-...- ...+.+..+...-++..++.++.++.|+.||..+|+.+-+....
T Consensus 201 dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 201 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 456788899999999999999986533211 11122333322223344444556789999999999988776654
Q ss_pred CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
.........+. .. +..++.. .+|.+..+|..+|+..-........ ...+..+.++..++..+.+| .+
T Consensus 281 ~~~~~~~~~~~-----~~-~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~--v~~l~~spdg~~l~s~s~D~----~v 348 (611)
T 1nr0_A 281 TRIEDQQLGII-----WT-KQALVSISANGFINFVNPELGSIDQVRYGHNKA--ITALSSSADGKTLFSADAEG----HI 348 (611)
T ss_dssp SSGGGCEEEEE-----EC-SSCEEEEETTCCEEEEETTTTEEEEEECCCSSC--EEEEEECTTSSEEEEEETTS----CE
T ss_pred CCccceeEEEE-----Ec-CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC--EEEEEEeCCCCEEEEEeCCC----cE
Confidence 32210001111 01 2233333 5888888888888654332221111 12222222344444433333 35
Q ss_pred EEEECCCCce
Q 002016 205 YQINAMNGEL 214 (981)
Q Consensus 205 ~aLd~~tG~~ 214 (981)
...|..+|+.
T Consensus 349 ~~Wd~~~~~~ 358 (611)
T 1nr0_A 349 NSWDISTGIS 358 (611)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCce
Confidence 5566666654
No 184
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.08 E-value=7.1 Score=41.34 Aligned_cols=190 Identities=13% Similarity=0.068 Sum_probs=103.9
Q ss_pred CCCEEEEEcC-----CCEEEEEECCCCccceEEEcCCCccee-eeeeeecCeEEEEEccC------CEEEEEeCCCCcEe
Q 002016 52 GRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDVVD-GIDIALGKYVITLSSDG------STLRAWNLPDGQMV 119 (981)
Q Consensus 52 ~~~~VyvaT~-----~g~L~ALd~~tG~ivWR~~l~~~~~i~-~l~~~~~~~vV~Vs~~g------~~V~A~da~tG~ll 119 (981)
.++.||+... .+.+..+|+.++ .|+..-+.+..-. ...+..++.++++||.+ ..+..||..+++
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-- 129 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES-- 129 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTT--EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCC--eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--
Confidence 4677888765 368999999988 4987643331111 11124566777767643 458999998875
Q ss_pred EEEeccCccccCCceeecccccccCCcEEEEEe-----------CCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeec
Q 002016 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-----------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDE 187 (981)
Q Consensus 120 We~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-----------~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~ 187 (981)
|+....-+.. . . .+.....++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+ ...
T Consensus 130 W~~~~~~p~~---r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~ 199 (306)
T 3ii7_A 130 WHTKPSMLTQ---R--C-SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGL--VFV 199 (306)
T ss_dssp EEEECCCSSC---C--B-SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEE
T ss_pred eEeCCCCcCC---c--c-eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceE--EEE
Confidence 8765332111 0 0 001111245666653 234889998887 68765432221 11112 235
Q ss_pred CCeEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccC-ceEEEcCcEEEEEEC----CCCeEEEEEeecCe
Q 002016 188 SDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDT----TRSILVTVSFKNRK 257 (981)
Q Consensus 188 ~~~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~----~~g~L~v~~L~sg~ 257 (981)
++.+|++|-..+. .-.+..+|+.+++ |+..-..|....+ .+.+.++.+++..-. ....+.+.++++++
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 7888887643211 1247889998874 8775444544433 233334444433211 12356667776665
No 185
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.98 E-value=3.2 Score=43.33 Aligned_cols=71 Identities=7% Similarity=0.104 Sum_probs=45.6
Q ss_pred CCEEEEEcCCCEEEEEECCCCccc-----eEE--EcCC-Ccceeeeeeeec--CeEEEEEccCCEEEEEeCCCCcEeEEE
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIF-----WRH--VLGI-NDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQMVWES 122 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~iv-----WR~--~l~~-~~~i~~l~~~~~--~~vV~Vs~~g~~V~A~da~tG~llWe~ 122 (981)
+..+++++.+|.|...|.++|+.. |+. .+.. ...+..+..... +..++.++.++.|+.||..+|+.+-..
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 667999999999999999998532 222 2221 122333322222 455555666789999999999876554
Q ss_pred e
Q 002016 123 F 123 (981)
Q Consensus 123 ~ 123 (981)
.
T Consensus 151 ~ 151 (351)
T 3f3f_A 151 T 151 (351)
T ss_dssp E
T ss_pred c
Confidence 4
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.96 E-value=7.6 Score=41.22 Aligned_cols=151 Identities=11% Similarity=-0.028 Sum_probs=75.8
Q ss_pred CCEEEE-EcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccC----CEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVV-STEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG----STLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~Vyv-aT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g----~~V~A~da~tG~llWe~~~~~~ 127 (981)
++++|+ .+.++.|..+|+++|+..-... .....+.++....++.+++.+..+ +.|+.||..+|+..-.......
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 556775 5678899999999997542221 222223344111233344433333 4899999988876421111111
Q ss_pred cccCCceeecccccccCCcEEEEEe--------CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCC
Q 002016 128 KHSKPLLLVPTNLKVDKDSLILVSS--------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGS 199 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~V~~--------~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~ 199 (981)
.. ....+. .+.++.+++.. .+.|+.+|.++|+..-...... .+..+.....+..+|+.....+
T Consensus 134 ~~-~~~~i~-----~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 134 AY-CIDDMV-----FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---VANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp CC-CEEEEE-----ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---SEEEEEECTTSSEEEEEEGGGT
T ss_pred CC-cccceE-----ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC---cccceEECCCCCEEEEEeCCCC
Confidence 00 000111 12344566653 2689999988776542211110 1222321223345777553322
Q ss_pred ceeEEEEEECC-CCceee
Q 002016 200 SQFHAYQINAM-NGELLN 216 (981)
Q Consensus 200 ~~~~v~aLd~~-tG~~lw 216 (981)
.+..+|.. +|+.+.
T Consensus 205 ---~i~~~d~~~~g~~~~ 219 (333)
T 2dg1_A 205 ---RLHRIALEDDGVTIQ 219 (333)
T ss_dssp ---EEEEEEECTTSSSEE
T ss_pred ---eEEEEEecCCCcCcc
Confidence 47778876 365543
No 187
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.84 E-value=5.1 Score=42.53 Aligned_cols=189 Identities=10% Similarity=0.060 Sum_probs=100.1
Q ss_pred CCEEEEEcC---CCEEEEEECCCCccceEEEcCCCcce-eeeeeeecCeEEEEEccC----CEEEEEeCCCCcEeEEEec
Q 002016 53 RKRVVVSTE---ENVIASLDLRHGEIFWRHVLGINDVV-DGIDIALGKYVITLSSDG----STLRAWNLPDGQMVWESFL 124 (981)
Q Consensus 53 ~~~VyvaT~---~g~L~ALd~~tG~ivWR~~l~~~~~i-~~l~~~~~~~vV~Vs~~g----~~V~A~da~tG~llWe~~~ 124 (981)
.+.||+... .+.+.++|+.+++ |+..-+.+..- ....+..++.++++||.+ ..+..+|+.++ .|+.-.
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYS--WTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKL 86 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTE--EEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTT--EEEEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCC--EecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCC--eEEECC
Confidence 355665543 4689999999985 98653322111 111134566777767643 67999999887 487543
Q ss_pred cCccccCCceeecccccccCCcEEEEEe--C------CEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCeEEEEE
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS--K------GCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYVVG 195 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~------g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyvvg 195 (981)
.-+.. . . .+....-++.+++.+ + ..+..+|..++ .|+.-.+.+.- ....+ ...++.+|++|
T Consensus 87 ~~p~~---r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~~iyv~G 156 (306)
T 3ii7_A 87 GPPTP---R--D-SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPSMLTQRCSHGM--VEANGLIYVCG 156 (306)
T ss_dssp CCSSC---C--B-SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEETTEEEEEC
T ss_pred CCCcc---c--c-ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCCCCcCCcceeEE--EEECCEEEEEC
Confidence 22111 0 0 001111245667653 2 35889998877 48765432221 01111 23578899876
Q ss_pred ecCCc------eeEEEEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEE--ECC--CCeEEEEEeecCe
Q 002016 196 YAGSS------QFHAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTL--DTT--RSILVTVSFKNRK 257 (981)
Q Consensus 196 ~~g~~------~~~v~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~--d~~--~g~L~v~~L~sg~ 257 (981)
-..+. .-.+..+|+.++ .|+..-..|....+. +.+.++.+++.. +.. ...+.+.|+.+++
T Consensus 157 G~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 157 GSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 43111 234788999887 577654445444442 222333333321 110 1245666666554
No 188
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.84 E-value=6.9 Score=43.20 Aligned_cols=150 Identities=15% Similarity=0.234 Sum_probs=86.7
Q ss_pred cCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCcc--ccCCceeecccccc---cCCcEEEE-Ee--------------C
Q 002016 95 GKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSK--HSKPLLLVPTNLKV---DKDSLILV-SS--------------K 153 (981)
Q Consensus 95 ~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~~--~s~~~~~v~~~~~~---~~~~~V~V-~~--------------~ 153 (981)
.++.+++|. ..++|..||+.+|.. .+....... . .+. ..+..-.. +.++.++| .. +
T Consensus 23 ~~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~~~s~~g-~~~-~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~ 99 (334)
T 2p9w_A 23 TRQVFYQSNLYKGRIEVYNPKTQSH-FNVVIDGASSNG-DGE-QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGA 99 (334)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCCE-EEECCTTTCCSS-CCS-EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSC
T ss_pred CCCEEEEEeccCCEEEEEcCCCCeE-EEEecCCccccC-CCc-ceeeEEEEeccCCCCcEEEEEcccccccccccccCCC
Confidence 356778776 578999999976644 355333211 0 000 01111112 23455555 33 4
Q ss_pred CEEEEEECC---CCcEeEEEeccCcce--------eeeEEEE--eecCCeEEEEEecC-CceeEEEEEECCCCcee--ee
Q 002016 154 GCLHAVSSI---DGEILWTRDFAAESV--------EVQQVIQ--LDESDQIYVVGYAG-SSQFHAYQINAMNGELL--NH 217 (981)
Q Consensus 154 g~l~aLd~~---tG~~~W~~~~~~~~~--------~~~~vv~--s~~~~~Vyvvg~~g-~~~~~v~aLd~~tG~~l--w~ 217 (981)
..|.++|.. +|+.+|...+....- ....+.+ ....|.+||.+..+ + .++-+|+. |+.+ |-
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~---~I~rV~pd-G~~~~~~~ 175 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP---AIARVSAD-GKTVSTFA 175 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC---EEEEECTT-SCCEEEEE
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC---eEEEEeCC-CCEEeeee
Confidence 789999999 999999998742110 0111222 34688999966555 4 47888874 5532 43
Q ss_pred eeeeccC-----CccCceEEE-cCcEEEEEECCCCeEEEEEeec
Q 002016 218 ETAAFSG-----GFVGDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (981)
Q Consensus 218 ~~v~~p~-----~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~s 255 (981)
. ..|. ++.| +++. .++.++..+. .+.|.+.|+.+
T Consensus 176 ~--~~~~~~~~~G~nG-Iv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 176 W--ESGNGGQRPGYSG-ITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp E--CCCCSSSCCSCSE-EEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred e--cCCCcccccCcce-EEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 2 2221 2333 4444 4567777877 89999999874
No 189
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.80 E-value=4.6 Score=50.56 Aligned_cols=197 Identities=11% Similarity=0.116 Sum_probs=110.1
Q ss_pred eeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEE
Q 002016 42 KHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWE 121 (981)
Q Consensus 42 ~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe 121 (981)
....|+ .++..+.+++.+|.|.-.|..+++..-. +.....+..+....+. .++.++.++.|+.||..+|+.+..
T Consensus 21 ~~lafs---pdg~~lAsgs~Dg~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~-~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 21 IAAAFD---FTQNLLAIATVTGEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGI-YLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp EEEEEE---TTTTEEEEEETTSEEEEECSTTCEEEEE--CSSCCCEEEEEEETTT-EEEEEETTCEEEEEETTTCSEEEE
T ss_pred EEEEEC---CCCCEEEEEeCCCEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCC-EEEEEECcCeEEEEECCCCcEEEE
Confidence 334455 2466799999999999999988876543 3333334433212244 344345567999999999999887
Q ss_pred EeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEe-EEE-------eccCcc-eeeeEEEEeecCCeE
Q 002016 122 SFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEIL-WTR-------DFAAES-VEVQQVIQLDESDQI 191 (981)
Q Consensus 122 ~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~-W~~-------~~~~~~-~~~~~vv~s~~~~~V 191 (981)
......+. ...+- ..+..+++. .+|.+..+|..+|+.. ++. ....+. ..+..+.....++..
T Consensus 95 ~~~~~~V~--~v~~s------p~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 95 VFVPGKIT--SIDTD------ASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp EECSSCEE--EEECC------TTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred EcCCCCEE--EEEEC------CCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 76443221 11111 124455555 5999999999999864 221 000000 011122111222344
Q ss_pred EEEEecCCceeEEEEEECCCCceeeeeeeecc----CC---------ccC---ceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 192 YVVGYAGSSQFHAYQINAMNGELLNHETAAFS----GG---------FVG---DVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 192 yvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p----~~---------~~~---~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
+++|...+ .+ ..|.++|+.+.......+ .+ -.+ .+.+- .+..+++.. .++.+++-++.
T Consensus 167 l~~g~~dg---~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs-~Dg~i~lWd~~ 241 (902)
T 2oaj_A 167 VLISYEYV---TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH-EDNSLVFWDAN 241 (902)
T ss_dssp EEEECSSC---EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE-TTCCEEEEETT
T ss_pred EEEEeCCC---cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECC
Confidence 44454433 46 889999988755533211 00 011 11121 344666665 46888888888
Q ss_pred cCe
Q 002016 255 NRK 257 (981)
Q Consensus 255 sg~ 257 (981)
+|+
T Consensus 242 ~g~ 244 (902)
T 2oaj_A 242 SGH 244 (902)
T ss_dssp TCC
T ss_pred CCc
Confidence 876
No 190
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.73 E-value=3.9 Score=44.38 Aligned_cols=157 Identities=12% Similarity=0.031 Sum_probs=78.5
Q ss_pred cCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceee-eeeeecCeEEE-EE---------------------ccCCE
Q 002016 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVIT-LS---------------------SDGST 107 (981)
Q Consensus 51 ~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~-l~~~~~~~vV~-Vs---------------------~~g~~ 107 (981)
.+++.|++++.++.|+.+|+.+|+..--........... .....++..++ +. .....
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 356679999888999999999998765444433210001 10011222222 11 12357
Q ss_pred EEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEE-Ee------CCEEEEEECCCCcEeEEEeccCcceeee
Q 002016 108 LRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILV-SS------KGCLHAVSSIDGEILWTRDFAAESVEVQ 180 (981)
Q Consensus 108 V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V-~~------~g~l~aLd~~tG~~~W~~~~~~~~~~~~ 180 (981)
++.||..+|+...-....... ....+-| .+ ++.++. .. ...|+.+|..+|+..--.....+.. ..
T Consensus 170 l~~~d~~~g~~~~l~~~~~~~--~~~~~sp----~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~-~~ 241 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQENQWL--GHPIYRP----YD-DSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGES-CT 241 (388)
T ss_dssp EEEEETTTCCEEEEEEESSCE--EEEEEET----TE-EEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEE-EE
T ss_pred EEEEECCCCceEEeecCCccc--cccEECC----CC-CCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcc-cc
Confidence 999999999876443322211 1111111 01 222333 22 2267777776655322111111111 11
Q ss_pred EEEEeecCCeEEEEEec-CCceeEEEEEECCCCcee
Q 002016 181 QVIQLDESDQIYVVGYA-GSSQFHAYQINAMNGELL 215 (981)
Q Consensus 181 ~vv~s~~~~~Vyvvg~~-g~~~~~v~aLd~~tG~~l 215 (981)
....+.++..+++++.. +..+..++.+|+.+|+..
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 22223455556555554 333345899999999864
No 191
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.69 E-value=1.8 Score=48.64 Aligned_cols=65 Identities=8% Similarity=-0.113 Sum_probs=44.4
Q ss_pred cCCCEEEEEc----------CCCEEEEEECCCCccceEEEcCCC------cceeeeeeeecCeEEEEEcc--CCEEEE--
Q 002016 51 TGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGIN------DVVDGIDIALGKYVITLSSD--GSTLRA-- 110 (981)
Q Consensus 51 ~~~~~VyvaT----------~~g~L~ALd~~tG~ivWR~~l~~~------~~i~~l~~~~~~~vV~Vs~~--g~~V~A-- 110 (981)
.+++.+||++ ..+.|..+|+.|++++.+..++.+ ....++...-++..++|+.. ++.|..
T Consensus 74 pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~ 153 (368)
T 1mda_H 74 HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSV 153 (368)
T ss_dssp TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEE
Confidence 3577899997 368999999999999999887621 00112322335556666642 457888
Q ss_pred EeCCC
Q 002016 111 WNLPD 115 (981)
Q Consensus 111 ~da~t 115 (981)
+|+.+
T Consensus 154 iD~~t 158 (368)
T 1mda_H 154 PGASD 158 (368)
T ss_dssp TTTEE
T ss_pred Echhh
Confidence 88877
No 192
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.62 E-value=9.3 Score=41.11 Aligned_cols=195 Identities=14% Similarity=0.124 Sum_probs=90.0
Q ss_pred CCCEEEEEcCC----CEE--EEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEE-
Q 002016 52 GRKRVVVSTEE----NVI--ASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWES- 122 (981)
Q Consensus 52 ~~~~VyvaT~~----g~L--~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~- 122 (981)
+++.||+++++ |.+ +.+|..+|+..-....... .....+ +.++..++++. .++.+..|+..++..+.+.
T Consensus 60 dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~--~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 137 (361)
T 3scy_A 60 DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYL--TTNGKNIVTANYSGGSITVFPIGQDGALLPAS 137 (361)
T ss_dssp TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEE--EECSSEEEEEETTTTEEEEEEBCTTSCBCSCS
T ss_pred CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEE--EECCCEEEEEECCCCEEEEEEeCCCCcCcccc
Confidence 46679999885 566 5667777875333332211 112233 22455555554 4679999998744332211
Q ss_pred ---eccCccccCC--------ceeecccccccCCcEEEEEe--CCEEEEEECC--CC----c-Ee-----EEEeccCcce
Q 002016 123 ---FLRGSKHSKP--------LLLVPTNLKVDKDSLILVSS--KGCLHAVSSI--DG----E-IL-----WTRDFAAESV 177 (981)
Q Consensus 123 ---~~~~~~~s~~--------~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~--tG----~-~~-----W~~~~~~~~~ 177 (981)
...+... .+ ..+.- ...++.+++.. ++.+..++.. +| + .. -......+.
T Consensus 138 ~~~~~~g~~~-~~~~~~~~~~~~~~~----spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 211 (361)
T 3scy_A 138 DVIEFKGSGP-DKERQTMPHLHCVRI----TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS- 211 (361)
T ss_dssp EEEECCCCCS-CTTTCSSCCEEEEEE----CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC-
T ss_pred eeEEccCCCC-CccccCCCcceEEEE----CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC-
Confidence 1111000 00 00110 01133455543 5566555433 33 2 11 112222111
Q ss_pred eeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeec-cCCccC--ceEEE-cCcEEEEEECC-CCeEEEEE
Q 002016 178 EVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAF-SGGFVG--DVALV-SSDTLVTLDTT-RSILVTVS 252 (981)
Q Consensus 178 ~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~-p~~~~~--~~~~v-g~~~lv~~d~~-~g~L~v~~ 252 (981)
.+..+..+.++..+|+.+..++ .+..+|..+|+......+.. +....+ .+.+- .+..+++.+.. .+.+.+.+
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~---~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGG---TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTC---EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCeEEEEcCCCCEEEEEcCCCC---eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 2334433344556777654332 46777777887654443322 221122 12222 33456566655 56777777
Q ss_pred ee--cCe
Q 002016 253 FK--NRK 257 (981)
Q Consensus 253 L~--sg~ 257 (981)
+. +|+
T Consensus 289 ~~~~~g~ 295 (361)
T 3scy_A 289 VDETNGT 295 (361)
T ss_dssp ECTTTCC
T ss_pred EcCCCCc
Confidence 74 454
No 193
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.56 E-value=6.1 Score=43.32 Aligned_cols=70 Identities=9% Similarity=0.037 Sum_probs=44.9
Q ss_pred CCCEEEEEc--CCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEec
Q 002016 52 GRKRVVVST--EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (981)
Q Consensus 52 ~~~~VyvaT--~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~ 124 (981)
++..+.+|| .++.|.-.|+++|+.+....-..+ +..+...-++..++.+++ +.++.|+..+|+.+-+...
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTD 215 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECC
T ss_pred CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeec
Confidence 445566666 579999999999999887654332 433322223344443444 4688888888887765443
No 194
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.43 E-value=9 Score=40.36 Aligned_cols=163 Identities=15% Similarity=0.113 Sum_probs=90.9
Q ss_pred CCCEEEEEcCC------CEEEEEECCCCc-cceEEEcCCCccee-eeeeeecCeEEEEEccC-----CEEEEEeCCCCcE
Q 002016 52 GRKRVVVSTEE------NVIASLDLRHGE-IFWRHVLGINDVVD-GIDIALGKYVITLSSDG-----STLRAWNLPDGQM 118 (981)
Q Consensus 52 ~~~~VyvaT~~------g~L~ALd~~tG~-ivWR~~l~~~~~i~-~l~~~~~~~vV~Vs~~g-----~~V~A~da~tG~l 118 (981)
.++.+|+.... +.+..+|+.+++ ..|+..-+.+..-. ...+..++.++++||.+ ..+..+|..+++
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~- 139 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ- 139 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE-
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe-
Confidence 46778876542 579999999986 55998744332111 11123566666666532 368999998775
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCe
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQ 190 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~ 190 (981)
|+.-...+..-... .....++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+ ...++.
T Consensus 140 -W~~~~~~p~~r~~~------~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~~ 208 (301)
T 2vpj_A 140 -WSMLGDMQTAREGA------GLVVASGVIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGV--ALLNDH 208 (301)
T ss_dssp -EEEEEECSSCCBSC------EEEEETTEEEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEETTE
T ss_pred -EEECCCCCCCcccc------eEEEECCEEEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceE--EEECCE
Confidence 77543211100000 1111245566653 246889998876 68765432211 01112 235788
Q ss_pred EEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccC
Q 002016 191 IYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG 228 (981)
Q Consensus 191 Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~ 228 (981)
+|++|-..+. .-.+..+|+.+++ |+..-..|.....
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCY 246 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBS
T ss_pred EEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccc
Confidence 9988754311 1348889998874 7764344443333
No 195
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.36 E-value=9.8 Score=40.88 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccc-----eEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIF-----WRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~iv-----WR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
++..++.++.++.|.-.|..+++.. -...+... ..+..+.....+..++.++.++.|+.||..+|+.+.+....
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 4567999999999998888765421 12222221 22333322223344444666789999999999998877655
Q ss_pred CccccCCceeecccccccCCcEEEEE-eCCEEEEEECC
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSI 162 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~ 162 (981)
...+ ....+-| .+..++.. .|+.+...|..
T Consensus 118 ~~~v-~~v~~sp------~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 118 QSEV-YSVAFSP------DNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp CSCE-EEEEECS------STTEEEEEETTSCEEEEESS
T ss_pred CCcE-EEEEECC------CCCEEEEEcCCCEEEEEecc
Confidence 4322 1122211 13344444 48888888876
No 196
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.32 E-value=5.5 Score=43.07 Aligned_cols=107 Identities=10% Similarity=0.088 Sum_probs=61.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC--cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc--Cc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN--DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR--GS 127 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~--~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~--~~ 127 (981)
++..+.+++.+|.|.-.|..+|+..-+..+..+ ..+..+...-.+..++.++.++.++.||..++.......+. ..
T Consensus 27 ~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~ 106 (345)
T 3fm0_A 27 AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN 106 (345)
T ss_dssp TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS
T ss_pred CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC
Confidence 466788999999999999988875555544322 23433422223445555666779999999888654333332 21
Q ss_pred cccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCc
Q 002016 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGE 165 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~ 165 (981)
.+ ..+.+.| .+..++.. .|+.+...|..++.
T Consensus 107 ~v-~~v~~sp------~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 107 EV-KSVAWAP------SGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp CE-EEEEECT------TSSEEEEEETTSCEEEEEECTTS
T ss_pred Cc-eEEEEeC------CCCEEEEEECCCeEEEEECCCCC
Confidence 11 1111111 13333333 37788777777664
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.11 E-value=14 Score=41.55 Aligned_cols=154 Identities=17% Similarity=0.195 Sum_probs=80.6
Q ss_pred CCCEEEEEcCCC--EEEEEECCCCccceEE-EcCC--CcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc-
Q 002016 52 GRKRVVVSTEEN--VIASLDLRHGEIFWRH-VLGI--NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR- 125 (981)
Q Consensus 52 ~~~~VyvaT~~g--~L~ALd~~tG~ivWR~-~l~~--~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~- 125 (981)
+++.+|+++..+ .|+.+|+.+|...-+. .+.. .....++.....++.++++..+++|+.||..+|....-....
T Consensus 181 ~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~ 260 (409)
T 3hrp_A 181 DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLEL 260 (409)
T ss_dssp TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCC
T ss_pred CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccc
Confidence 355789998865 8999999877652222 1111 111223312222455665655679999999988754432211
Q ss_pred -CccccCCc-eeecccccccC-CcEEEEE--eCCEEEEEECCCCcEeEEEecc-C-c---------ce-eeeEEEEeecC
Q 002016 126 -GSKHSKPL-LLVPTNLKVDK-DSLILVS--SKGCLHAVSSIDGEILWTRDFA-A-E---------SV-EVQQVIQLDES 188 (981)
Q Consensus 126 -~~~~s~~~-~~v~~~~~~~~-~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~-~-~---------~~-~~~~vv~s~~~ 188 (981)
+.....+. .+. .+. ++.+++. .++++++++.. |+........ . + .+ .|..+. ...+
T Consensus 261 ~g~~~~~P~~~ia-----~~p~~g~lyv~d~~~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia-~d~d 333 (409)
T 3hrp_A 261 SGSLGTNPGPYLI-----YYFVDSNFYMSDQNLSSVYKITPD-GECEWFCGSATQKTVQDGLREEALFAQPNGMT-VDED 333 (409)
T ss_dssp CSCCCCSSCCEEE-----EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEE-ECTT
T ss_pred cCCCCCCccccEE-----EeCCCCEEEEEeCCCCEEEEEecC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEE-EeCC
Confidence 11110100 111 122 4667775 37889998854 4433222211 0 0 01 144443 2345
Q ss_pred CeEEEEEe-cCCceeEEEEEECCCCcee
Q 002016 189 DQIYVVGY-AGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 189 ~~Vyvvg~-~g~~~~~v~aLd~~tG~~l 215 (981)
+.+|+... .+. ++..+|+.+|+..
T Consensus 334 G~lyvad~~~~~---~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 334 GNFYIVDGFKGY---CLRKLDILDGYVS 358 (409)
T ss_dssp CCEEEEETTTTC---EEEEEETTTTEEE
T ss_pred CCEEEEeCCCCC---EEEEEECCCCEEE
Confidence 66887654 332 6888998888754
No 198
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.08 E-value=9.4 Score=39.60 Aligned_cols=191 Identities=13% Similarity=0.104 Sum_probs=99.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEe-ccCcccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESF-LRGSKHS 130 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~-~~~~~~s 130 (981)
+++.+++++.+|.|.-.|.++|+.+....-... .+... ...+..++.++.++.++.|+..++...-... ......
T Consensus 78 ~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~-~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (318)
T 4ggc_A 78 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV- 153 (318)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE-
T ss_pred CCCEEEEEECCCcEEEeecCCceeEEEecCccc-eEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCce-
Confidence 466799999999999999999998887654332 12222 2334455556666789999988775443322 222111
Q ss_pred CCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEE----eccCcceeeeEEEEeecCCeEEEEEecCCceeEEE
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTR----DFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~----~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~ 205 (981)
...... ..+..++.. .||.+...|..+|+..... ....... ..+........++..+. |+....+.
T Consensus 154 ~~~~~~------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~-~~~~~~i~ 224 (318)
T 4ggc_A 154 CGLRWA------PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV--KAVAWCPWQSNVLATGG-GTSDRHIR 224 (318)
T ss_dssp EEEEEC------TTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCE--EEEEECTTSTTEEEEEE-CTTTCEEE
T ss_pred EEEEEc------CCCCEEEEEecCcceeEEECCCCcccccceeeecccCCce--EEEEecCCCCcEEEEEe-cCCCCEEE
Confidence 001111 123344444 4888998998888643221 1111111 11111222333332222 22223466
Q ss_pred EEECCCCceeeeeeeeccCCccCceEEEcCcEEEEE-ECCCCeEEEEEeecCe
Q 002016 206 QINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTL-DTTRSILVTVSFKNRK 257 (981)
Q Consensus 206 aLd~~tG~~lw~~~v~~p~~~~~~~~~vg~~~lv~~-d~~~g~L~v~~L~sg~ 257 (981)
..|..++........ ...+...+....++.++.. ...++.+++-++.+++
T Consensus 225 lwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~ 275 (318)
T 4ggc_A 225 IWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 275 (318)
T ss_dssp EEETTTCCEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred EEecccccccccccc--eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc
Confidence 667777776654421 1111111111233344433 3346788888888876
No 199
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=93.02 E-value=2 Score=50.44 Aligned_cols=144 Identities=19% Similarity=0.226 Sum_probs=77.1
Q ss_pred EEEEECCCCccceEEEcCCC-cce-----------e--eeeee-ecC---eEEEEEcc--CCEEEEEeCCCCcE--eEEE
Q 002016 65 IASLDLRHGEIFWRHVLGIN-DVV-----------D--GIDIA-LGK---YVITLSSD--GSTLRAWNLPDGQM--VWES 122 (981)
Q Consensus 65 L~ALd~~tG~ivWR~~l~~~-~~i-----------~--~l~~~-~~~---~vV~Vs~~--g~~V~A~da~tG~l--lWe~ 122 (981)
|..+|-+||+.+|+.....+ ..+ + ...++ .++ .+|+.-+. -..|.|||..+|++ +|++
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 89999999999999988532 111 1 11111 122 24444332 24699999999975 9999
Q ss_pred eccCcc---c-c--CCceeecccccccCCc--EEEEEeCCEEEEEECCCCcEeEEEeccCcceeeeEEEEe---ecCCeE
Q 002016 123 FLRGSK---H-S--KPLLLVPTNLKVDKDS--LILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQL---DESDQI 191 (981)
Q Consensus 123 ~~~~~~---~-s--~~~~~v~~~~~~~~~~--~V~V~~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s---~~~~~V 191 (981)
....+. . . ...+.+. ..+.|+ -|++ ++. ++| .+|+.+|+.....+.. ..+.+. ..+-.|
T Consensus 311 d~~~~~~~~~~gqg~h~~~va---DVDgDG~dEIv~--Gs~--~iD-~dG~~L~st~~gHGDa--~hv~dldP~r~GlEv 380 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIA---DVDGDGKDEIIF--GSM--AVD-HDGKGMYSTGLGHGDA--LHTGDLDPGRPGLEV 380 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEE---CCSSSSSCEEEE--TTE--EEC-TTSCEEEECSCCCCSC--EEEECCCTTSSSCEE
T ss_pred cCCCCCcccccccCCCCCeeE---eCCCCCCceEEE--eee--EEC-CCCCEeeeCCCCCCCe--eEEeecCCCCCCcEE
Confidence 876432 1 0 0111111 112222 2222 221 455 7999999987754432 122111 112345
Q ss_pred EEEEecCCce-eEEEEEECCCCceeeeee
Q 002016 192 YVVGYAGSSQ-FHAYQINAMNGELLNHET 219 (981)
Q Consensus 192 yvvg~~g~~~-~~v~aLd~~tG~~lw~~~ 219 (981)
|.+ ..+.+. .-..-.|+.||+++|+..
T Consensus 381 ~~~-~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 381 FQV-HEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp EEE-CCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred EEE-ecCCCCCCccEEEECCCCcEEEEcC
Confidence 543 332111 013447999999999983
No 200
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.79 E-value=2.1 Score=52.23 Aligned_cols=199 Identities=7% Similarity=-0.035 Sum_probs=98.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC-Ccceeeeeeeec--CeEEEEEccCCEEEEEeCCCCcEe--EEEeccCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQMV--WESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~-~~~i~~l~~~~~--~~vV~Vs~~g~~V~A~da~tG~ll--We~~~~~~ 127 (981)
++.+++++.+|.|...|.++|+..=...+.. ...+..+..... +..++.++.++.|+.||..++... ........
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 5679999999999999999986221222221 122333322222 456665666789999999988432 22222211
Q ss_pred cccCCceeecccc-------cccCCcEEEEE-eCCEEEEEECCCCcEeEEEecc--CcceeeeEEEEeecC--CeEEEEE
Q 002016 128 KHSKPLLLVPTNL-------KVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA--AESVEVQQVIQLDES--DQIYVVG 195 (981)
Q Consensus 128 ~~s~~~~~v~~~~-------~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~--~~~~~~~~vv~s~~~--~~Vyvvg 195 (981)
.. ....+.|... ....+..+++. .+|.+..+|..+|...|..... ........+..+..+ +..++.+
T Consensus 147 ~v-~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 147 GV-NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp CE-EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred ce-EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence 11 1111111000 00012334444 4899999998888655543221 111112223222231 3444444
Q ss_pred ecCCceeEEEEEECCCCceeeeeeeeccCCccC---ceEEE-cCcEEEEEECCCCeEEEEEeecC
Q 002016 196 YAGSSQFHAYQINAMNGELLNHETAAFSGGFVG---DVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (981)
Q Consensus 196 ~~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~---~~~~v-g~~~lv~~d~~~g~L~v~~L~sg 256 (981)
...+ .+...|..+|+..+...+.......+ .+.+- .+..+++.. .+|.+++-++.++
T Consensus 226 s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s-~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 226 SQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKENLE 286 (753)
T ss_dssp ESSS---CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC-SSSCEECCBCCSS
T ss_pred ecCC---EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc-CCCEEEEEecCCC
Confidence 3332 37777888886554443322211111 12222 233444443 4577877777653
No 201
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.76 E-value=5 Score=47.72 Aligned_cols=143 Identities=11% Similarity=0.089 Sum_probs=83.9
Q ss_pred CCCEEEEEcC------------------CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccC--------
Q 002016 52 GRKRVVVSTE------------------ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG-------- 105 (981)
Q Consensus 52 ~~~~VyvaT~------------------~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g-------- 105 (981)
+.+.||++++ +|.+.++|.++.+++|+..++.. ..+..+.-+++.++++..+
T Consensus 146 ~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 146 RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchh
Confidence 5778999953 46899999999999999998543 2233222344555554422
Q ss_pred ------------------------------CEEEEEeCCC--CcE-eEEEeccCccccCCceeecccccccCCcEEEEE-
Q 002016 106 ------------------------------STLRAWNLPD--GQM-VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS- 151 (981)
Q Consensus 106 ------------------------------~~V~A~da~t--G~l-lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~- 151 (981)
+.|..+|..+ |+. +-..+...... ...+. ..+..++|.
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~Ph--Gv~~s------PDGk~v~V~~ 295 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPH--GCNMA------PDKKHLCVAG 295 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCC--CEEEC------TTSSEEEEEC
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCce--EEEEc------CCCCEEEEeC
Confidence 1366667666 544 44444332211 11111 125567775
Q ss_pred -eCCEEEEEECCCCc------------EeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCC
Q 002016 152 -SKGCLHAVSSIDGE------------ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMN 211 (981)
Q Consensus 152 -~~g~l~aLd~~tG~------------~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~t 211 (981)
.++++..+|.++.+ +..+..... .|.++... .++.+|+..+-.+ .+..+|..+
T Consensus 296 ~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---gP~h~aF~-~dG~aY~t~~lds---qV~kwdi~~ 361 (595)
T 1fwx_A 296 KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---GPLHTAFD-GRGNAYTSLFLDS---QVVKWNIED 361 (595)
T ss_dssp TTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS---CEEEEEEC-TTSEEEEEETTTT---EEEEEEHHH
T ss_pred CCCCeEEEEECcccccccccccCcccceEEEcCCCC---CcceEEEC-CCCeEEEEEecCC---cEEEEEhhH
Confidence 37899999998653 334333222 25555422 3447887666554 477788776
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.69 E-value=10 Score=40.71 Aligned_cols=143 Identities=12% Similarity=0.076 Sum_probs=71.5
Q ss_pred CCEEEEE-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++.+|+. +..+.|..+|+++|+.. ...++. .+.++....++.+++ +.. ..|+.||..+|+...-...... . .
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~--~v~~i~~~~dg~l~v-~~~-~gl~~~d~~~g~~~~~~~~~~~-~-~ 132 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKT-VHALPF--MGSALAKISDSKQLI-ASD-DGLFLRDTATGVLTLHAELESD-L-P 132 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEE-EEECSS--CEEEEEEEETTEEEE-EET-TEEEEEETTTCCEEEEECSSTT-C-T
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEECCC--cceEEEEeCCCeEEE-EEC-CCEEEEECCCCcEEEEeeCCCC-C-C
Confidence 4565555 46789999999998753 122322 233332223344444 443 3599999999987533322111 0 0
Q ss_pred CceeecccccccCCcEEEEEe--------CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 132 PLLLVPTNLKVDKDSLILVSS--------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~~--------~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
.... .....+.++.+++.. .+.|+.++ +|+..-...... .+..+..+.++..+|+.....+ .
T Consensus 133 ~~~~--~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~---~~~~i~~s~dg~~lyv~~~~~~---~ 202 (326)
T 2ghs_A 133 GNRS--NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS---IPNSICFSPDGTTGYFVDTKVN---R 202 (326)
T ss_dssp TEEE--EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES---SEEEEEECTTSCEEEEEETTTC---E
T ss_pred CCCC--CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc---ccCCeEEcCCCCEEEEEECCCC---E
Confidence 0000 001112344466642 26889998 676543211100 1222222234446777544332 5
Q ss_pred EEEEECC--CC
Q 002016 204 AYQINAM--NG 212 (981)
Q Consensus 204 v~aLd~~--tG 212 (981)
+..+|.. +|
T Consensus 203 I~~~d~~~~~G 213 (326)
T 2ghs_A 203 LMRVPLDARTG 213 (326)
T ss_dssp EEEEEBCTTTC
T ss_pred EEEEEcccccC
Confidence 7778875 78
No 203
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.67 E-value=12 Score=39.90 Aligned_cols=150 Identities=11% Similarity=0.058 Sum_probs=76.8
Q ss_pred CCEEEEEcCC---CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCc-EeEEEeccCc
Q 002016 53 RKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQ-MVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~~---g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~-llWe~~~~~~ 127 (981)
++++|+++.. ..|..+|+.+|++.....+.......+. ....++.++++. ..+.|+.+|..+|+ .+|...-...
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~-~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGI-TPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEE-EESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcc-cccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc
Confidence 5679998843 3688999999987544444322111232 112233455543 35699999998774 3443221100
Q ss_pred --cccCCceeecccccccCCcEEEEE--eCCEEEEEECCC-CcE----eEEEeccCcceeeeEEEEeecCCeEEEEEecC
Q 002016 128 --KHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSID-GEI----LWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 128 --~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~t-G~~----~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g 198 (981)
....... .| ++....++.+|+. .+++|++++... |+. .|.. .. .|..+. ...++.+|+....+
T Consensus 161 ~~~~~~~~~-~p-ngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~----~P~gi~-vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 161 RSNSESVFP-AA-NGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QT----NIDDFA-FDVEGNLYGATHIY 232 (306)
T ss_dssp CSSTTCCSC-SE-EEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SC----CCSSEE-EBTTCCEEEECBTT
T ss_pred cccccCCCC-cC-CCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cC----CCCCeE-ECCCCCEEEEeCCC
Confidence 0000000 00 0111124567775 378899999764 542 1211 11 122232 23467788755443
Q ss_pred CceeEEEEEECCCCcee
Q 002016 199 SSQFHAYQINAMNGELL 215 (981)
Q Consensus 199 ~~~~~v~aLd~~tG~~l 215 (981)
+ +|..+|+. |+..
T Consensus 233 ~---~V~~~~~~-G~~~ 245 (306)
T 2p4o_A 233 N---SVVRIAPD-RSTT 245 (306)
T ss_dssp C---CEEEECTT-CCEE
T ss_pred C---eEEEECCC-CCEE
Confidence 3 48888975 8763
No 204
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.41 E-value=0.52 Score=51.28 Aligned_cols=106 Identities=9% Similarity=0.004 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCEEEEEECCCCc--cceEEEcCC-CcceeeeeeeecCeEEEEEccCCEEEEEeCCCCc---EeEEEecc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGE--IFWRHVLGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQ---MVWESFLR 125 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~--ivWR~~l~~-~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~---llWe~~~~ 125 (981)
+++.+++++.+|.|.-.|..+|+ .+-. +.. ...+..+.....+..++.++.++.|+.||..+|+ ..-.....
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHART--FSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCC--BCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEE--EecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc
Confidence 45678888899999999998883 2222 221 1223333222233444445556799999999988 22222212
Q ss_pred CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcE
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI 166 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~ 166 (981)
.... ....+. ..+..++.. .+|.+...|..+|+.
T Consensus 100 ~~~v-~~~~~~------~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 100 NRAA-TFVRWS------PNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp SSCE-EEEECC------TTSSCCEEEESSSCEEECCC-----
T ss_pred CCce-EEEEEC------CCCCEEEEEecCCeEEEEEECCccc
Confidence 1111 111111 113334444 488888888888874
No 205
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.13 E-value=17 Score=40.11 Aligned_cols=109 Identities=20% Similarity=0.268 Sum_probs=62.9
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCC----cceeeee--ee------ecCeEEEEEccCCEEEEEeCCCCcEeEEE
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGIN----DVVDGID--IA------LGKYVITLSSDGSTLRAWNLPDGQMVWES 122 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~----~~i~~l~--~~------~~~~vV~Vs~~g~~V~A~da~tG~llWe~ 122 (981)
.+..++.++.|.-.|.++|+..-.+.+..- +.+..+. +. .++.+++-++.+++|+.||..+|...-..
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 467778899999999999987766655321 1232221 10 12334443556789999999888776655
Q ss_pred eccCccccCCceeecccccccCCc-EEEEE-eCCEEEEEECCCCcEeEEE
Q 002016 123 FLRGSKHSKPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGEILWTR 170 (981)
Q Consensus 123 ~~~~~~~s~~~~~v~~~~~~~~~~-~V~V~-~~g~l~aLd~~tG~~~W~~ 170 (981)
....... ....+-| .+. .++.. .||.+...|..+|+...+.
T Consensus 183 ~~~~~~v-~~v~~~p------~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 183 YPLSSPG-ISVQFRP------SNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp EECSSCE-EEEEEET------TEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred cCCCCCc-EEEEECC------CCCceEEecCCCCEEEEEECCCCcccccc
Confidence 4333221 1222222 122 34444 4999999999999876554
No 206
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.05 E-value=5.8 Score=47.81 Aligned_cols=155 Identities=14% Similarity=0.025 Sum_probs=77.0
Q ss_pred CCCEEEEEcC-CC----EEEEEECCCCccceEEEcCCCcceeeeee-eecCeEEEEEccC---------------CEEEE
Q 002016 52 GRKRVVVSTE-EN----VIASLDLRHGEIFWRHVLGINDVVDGIDI-ALGKYVITLSSDG---------------STLRA 110 (981)
Q Consensus 52 ~~~~VyvaT~-~g----~L~ALd~~tG~ivWR~~l~~~~~i~~l~~-~~~~~vV~Vs~~g---------------~~V~A 110 (981)
+++.|.+++. .| .|..+|.++|+.+=. .+... .+..+.- +.++.+++.+.++ .+|+.
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-cccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 4555554443 33 899999988875421 11111 1111211 2344555544332 23888
Q ss_pred EeCCCCc----EeEEEeccCccccCCceeecccccccCCcEEEEE-e-----CCEEEEEECCC------CcEeEEEecc-
Q 002016 111 WNLPDGQ----MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-S-----KGCLHAVSSID------GEILWTRDFA- 173 (981)
Q Consensus 111 ~da~tG~----llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~-----~g~l~aLd~~t------G~~~W~~~~~- 173 (981)
|+..+|. ++++..-..... .+..+- ..++.+++. . +..++.+|..+ |...|+.-..
T Consensus 213 ~~l~t~~~~~~~v~~~~~~~~~~-~~~~~S------pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 213 HVLGTDQSEDILCAEFPDEPKWM-GGAELS------DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp EETTSCGGGCEEEECCTTCTTCE-EEEEEC------TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred EECCCCcccceEEeccCCCCeEE-EEEEEc------CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 8888876 333321111000 011111 123344443 2 45788888877 6433332111
Q ss_pred CcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCce-eeee
Q 002016 174 AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL-LNHE 218 (981)
Q Consensus 174 ~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~-lw~~ 218 (981)
.... . ... +..++.+|+.+..++.+.+|+.+|+.+|+. .|+.
T Consensus 286 ~~~~-~-~~~-s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 328 (710)
T 2xdw_A 286 FEGE-Y-DYV-TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKV 328 (710)
T ss_dssp SSSC-E-EEE-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE
T ss_pred CCcE-E-EEE-eccCCEEEEEECCCCCCCEEEEEeCCCCCccccee
Confidence 1111 1 111 346778888776554456899999998864 4654
No 207
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.00 E-value=13 Score=44.48 Aligned_cols=155 Identities=11% Similarity=0.146 Sum_probs=80.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCC---ccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 52 GRKRVVVSTEENVIASLDLRHG---EIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG---~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
+++.|++++. +.|..+|..+| ++. + .......+...... .|+.+++++ + +.|+.||..+|+..--......
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~~~~~~~-~-l~~~~~~~~~~~~SPDG~~la~~~-~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQEGKAAVR-Q-LTHGEGFATDAKLSPKGGFVSFIR-G-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSCSTTSCC-B-CCCSSSCEEEEEECTTSSEEEEEE-T-TEEEEEETTTTEEEECCCCCCS
T ss_pred CCCEEEEEeC-CcEEEEECCCCCcceEE-E-cccCCcccccccCCCCCCEEEEEe-C-CcEEEEecCCCCEEEeccCCcc
Confidence 4556777766 89999999988 432 1 11111122222112 344455544 3 4899999999876532221111
Q ss_pred cc---------------cCCceeecccccccCCcEEEEE-eCC---------------------------------EEEE
Q 002016 128 KH---------------SKPLLLVPTNLKVDKDSLILVS-SKG---------------------------------CLHA 158 (981)
Q Consensus 128 ~~---------------s~~~~~v~~~~~~~~~~~V~V~-~~g---------------------------------~l~a 158 (981)
.. .....+-| + +..+++. .++ .|+.
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~Sp-----D-g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAP-----D-DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECT-----T-SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ceeccccceeeeeccccccceEECC-----C-CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 00 01111111 1 2333333 333 7788
Q ss_pred EECCC-CcEeEEEeccCcceeeeEEEEeecCCeEEEEEec-CCceeEEEEEECCCCceeeee
Q 002016 159 VSSID-GEILWTRDFAAESVEVQQVIQLDESDQIYVVGYA-GSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 159 Ld~~t-G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~-g~~~~~v~aLd~~tG~~lw~~ 218 (981)
+|..+ |+..+.............+.- .++..+++.+.. +.....+..+|+.+|+.....
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 88888 876654322111111233333 456666665543 334568999999999876443
No 208
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=91.97 E-value=3.7 Score=51.48 Aligned_cols=151 Identities=13% Similarity=0.092 Sum_probs=88.0
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc-------
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR------- 125 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~------- 125 (981)
+..++.++.+|.|.-.|.++|+.+-...... .+..+...-++..+++++.++.|+.||..+|++. .+...
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~--~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~ 145 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLTTVFVPG--KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSF 145 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEEEEECSS--CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHT
T ss_pred CCEEEEEECcCeEEEEECCCCcEEEEEcCCC--CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecccccccc
Confidence 4479999999999999999999887765332 2433322234556666766789999999999874 22210
Q ss_pred -----CccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCc----------------ceeeeEEE
Q 002016 126 -----GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE----------------SVEVQQVI 183 (981)
Q Consensus 126 -----~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~----------------~~~~~~vv 183 (981)
...+ ..+.+-| ...+.+++. .+|.+ ..|..+|+.+-.+....+ .-....+.
T Consensus 146 ~~~~h~~~V-~sl~~sp-----~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 146 FPAARLSPI-VSIQWNP-----RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp CSSSCCCCC-CEEEEET-----TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred ccccCCCCe-EEEEEcc-----CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 0000 1111111 111234444 48888 999999987766643200 00122222
Q ss_pred EeecCCeEEEEEecCCceeEEEEEECCCCceeee
Q 002016 184 QLDESDQIYVVGYAGSSQFHAYQINAMNGELLNH 217 (981)
Q Consensus 184 ~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~ 217 (981)
.+.+ +..++.+..++ .+...|..+|+.+-.
T Consensus 219 fspd-g~~lasgs~Dg---~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 219 YHPN-SLHIITIHEDN---SLVFWDANSGHMIMA 248 (902)
T ss_dssp ECTT-SSEEEEEETTC---CEEEEETTTCCEEEE
T ss_pred EcCC-CCEEEEEECCC---eEEEEECCCCcEEEE
Confidence 2223 44444443332 488889999988754
No 209
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.97 E-value=8.1 Score=43.15 Aligned_cols=145 Identities=12% Similarity=0.117 Sum_probs=80.1
Q ss_pred EEEEEcCCCEEEEEECCCCcc-ceEE----Ec-CCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCC---cEeEEEec
Q 002016 55 RVVVSTEENVIASLDLRHGEI-FWRH----VL-GINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDG---QMVWESFL 124 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~i-vWR~----~l-~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG---~llWe~~~ 124 (981)
.+++++.+|.|...|..++.. .+.. .+ .....+..+... .++.+++.++.++.|+.||..++ +.++....
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 788999999999999988543 2321 11 111123233111 24456655666789999999988 57777654
Q ss_pred cCccccCCceeecccccccCCcEEE-EE-eCCEEEEEECCC-CcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCce
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLIL-VS-SKGCLHAVSSID-GEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQ 201 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~-V~-~~g~l~aLd~~t-G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~ 201 (981)
..... ..+.+-| .+..++ +. .+|.|..+|..+ +.++-+........ ..+..+..+..+++.+...+
T Consensus 276 ~~~~v-~~i~~~p------~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v--~~i~~sp~~~~~l~s~~~d~-- 344 (430)
T 2xyi_A 276 HTAEV-NCLSFNP------YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI--FQVQWSPHNETILASSGTDR-- 344 (430)
T ss_dssp CSSCE-EEEEECS------SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE--EEEEECSSCTTEEEEEETTS--
T ss_pred CCCCe-EEEEeCC------CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE--EEEEECCCCCCEEEEEeCCC--
Confidence 43222 1111211 133234 44 489999999988 45555554332222 22322234444555444332
Q ss_pred eEEEEEECCC
Q 002016 202 FHAYQINAMN 211 (981)
Q Consensus 202 ~~v~aLd~~t 211 (981)
.+...|+.+
T Consensus 345 -~i~iwd~~~ 353 (430)
T 2xyi_A 345 -RLHVWDLSK 353 (430)
T ss_dssp -CCEEEEGGG
T ss_pred -cEEEEeCCC
Confidence 366667765
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.94 E-value=14 Score=38.90 Aligned_cols=152 Identities=11% Similarity=0.044 Sum_probs=80.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeeecCeEEEEEc------------cCCEEEEEeCCCCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALGKYVITLSS------------DGSTLRAWNLPDGQ 117 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~~~~vV~Vs~------------~g~~V~A~da~tG~ 117 (981)
++++|+++ .+.|+.+|+++|+...-....... .+..+ ....++.++++. ..+.|+.+|+. |+
T Consensus 64 dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di-~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~ 140 (297)
T 3g4e_A 64 SGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDG-KVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HH 140 (297)
T ss_dssp TSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEE-EECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC
T ss_pred CCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCE-EECCCCCEEEecCCcccccccccCCCcEEEEEECC-CC
Confidence 55688887 567999999999865444432211 11222 122233344443 12467888763 55
Q ss_pred EeEEEeccCccccCCceeecccccccCCcEEEEEe--CCEEEEEEC--CCCcEeEEE---eccCcceeeeEEEEeecCCe
Q 002016 118 MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSS--IDGEILWTR---DFAAESVEVQQVIQLDESDQ 190 (981)
Q Consensus 118 llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~--~tG~~~W~~---~~~~~~~~~~~vv~s~~~~~ 190 (981)
..-..... ..+..+.+- ..++.+++.. +++|.+++. .+|...-.. ........|..+. ...++.
T Consensus 141 ~~~~~~~~--~~pngi~~s------pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~-~d~~G~ 211 (297)
T 3g4e_A 141 VKKYFDQV--DISNGLDWS------LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMC-IDAEGK 211 (297)
T ss_dssp EEEEEEEE--SBEEEEEEC------TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEE-EBTTSC
T ss_pred EEEEeecc--ccccceEEc------CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeE-ECCCCC
Confidence 43211100 000111111 1234566653 788888875 788643211 1111111244443 235678
Q ss_pred EEEEEecCCceeEEEEEECCCCceeeeee
Q 002016 191 IYVVGYAGSSQFHAYQINAMNGELLNHET 219 (981)
Q Consensus 191 Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~ 219 (981)
+|+....++ .|..+|+.+|+.+-...
T Consensus 212 lwva~~~~~---~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 212 LWVACYNGG---RVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEEEEETTT---EEEEECTTTCCEEEEEE
T ss_pred EEEEEcCCC---EEEEEcCCCceEEEEEE
Confidence 998776654 59999999999886653
No 211
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.87 E-value=21 Score=40.81 Aligned_cols=182 Identities=16% Similarity=0.170 Sum_probs=88.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.++.+.-.|. +|+.+-.. ......+..+....++..++.++.++.++.||.....+. ......... .
T Consensus 273 d~~~l~~~~~d~~i~~w~~-~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~-~~~~~~~~v-~ 348 (577)
T 2ymu_A 273 DGQTIASASDDKTVKLWNR-NGQLLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ-TLTGHSSSV-W 348 (577)
T ss_dssp TSSEEEEEETTSCEEEEET-TSCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE-EECCCSSCE-E
T ss_pred CCCEEEEEeCCCEEEEEeC-CCcEEEEE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE-EEeCCCCCE-E
Confidence 4567888899999988885 56543222 111222333322223445554556679999997655443 333222211 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
...+. ..+..++.. .+|.+...| .+|+.+.+........ ..+..+.++..+. .+..++ .+...| .
T Consensus 349 ~~~~s------~~g~~l~~~~~dg~v~~~~-~~~~~~~~~~~~~~~v--~~~~~s~dg~~l~-~~~~d~---~v~~~~-~ 414 (577)
T 2ymu_A 349 GVAFS------PDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSV--RGVAFSPDGQTIA-SASDDK---TVKLWN-R 414 (577)
T ss_dssp EEEEC------TTSSEEEEEETTSEEEEEE-TTCCEEEEEECCSSCE--EEEEECTTSSCEE-EEETTS---EEEEEC-T
T ss_pred EEEEC------CCCCEEEEEeCCCEEEEEc-CCCCEEEEecCCCCCe--EEEEECCCCCEEE-EEeCCC---EEEEEe-C
Confidence 11111 113344444 488888888 5777776665433322 2222122333333 333332 355566 4
Q ss_pred CCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
+|+.+...... ...+. .+.+- .+..++... .++.+.+-++.
T Consensus 415 ~~~~~~~~~~~-~~~v~-~~~~s~d~~~l~~~~-~d~~v~~w~~~ 456 (577)
T 2ymu_A 415 NGQLLQTLTGH-SSSVW-GVAFSPDDQTIASAS-DDKTVKLWNRN 456 (577)
T ss_dssp TCCEEEEEECC-SSCEE-EEEECTTSSEEEEEE-TTSEEEEEETT
T ss_pred CCCEEEEecCC-CCCeE-EEEECCCCCEEEEEc-CCCEEEEEECC
Confidence 67765443211 11111 12221 233454443 35666666643
No 212
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.85 E-value=3 Score=50.99 Aligned_cols=149 Identities=10% Similarity=-0.009 Sum_probs=85.4
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC---CcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI---NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~---~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++.++++|..+-|..+|+++|+. +.-... ...+..+ ....++.+.+++. +.|..+|..+|+...-........
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i-~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKF--QIIELEKNELLDVRVF-YEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQL 492 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEE--EECCSTTTCCCCEEEE-EECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSC
T ss_pred CCCEEEEeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEE-EECCCCCEEEEEC-CceEEEeCCCCeEEecccCccccc
Confidence 67899999888899999999864 332211 1123333 2344566777765 469999999988665443321111
Q ss_pred cCCceeecccccccCCcEEEEEe-CCEEEEEECCCCcEeEEEeccC--cceeeeEEEEeecCCeEEEEEecCCceeEE-E
Q 002016 130 SKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAA--ESVEVQQVIQLDESDQIYVVGYAGSSQFHA-Y 205 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~~-~g~l~aLd~~tG~~~W~~~~~~--~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v-~ 205 (981)
.... +. ....+.++.+.+.+ ++.|+++|..+++... +.... +...+..+. ...++.+++.+..| + .
T Consensus 493 ~~~~-i~--~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i~~i~-~d~~g~lWi~T~~G-----lv~ 562 (781)
T 3v9f_A 493 LENF-VR--SIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTINQIY-RSSKGQMWLATGEG-----LVC 562 (781)
T ss_dssp SCSC-EE--EEEECTTCCEEEEESSSCEEEECTTCCEEEE-ECTTTTCSCSCEEEEE-ECTTSCEEEEETTE-----EEE
T ss_pred ccce-eE--EEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE-ccCCCCCCCCeeEEEE-ECCCCCEEEEECCC-----ceE
Confidence 0000 00 00124456677765 4679999998886443 22211 111122222 23567888766533 6 8
Q ss_pred EEECCCCcee
Q 002016 206 QINAMNGELL 215 (981)
Q Consensus 206 aLd~~tG~~l 215 (981)
.+|+.+++..
T Consensus 563 ~~d~~~~~~~ 572 (781)
T 3v9f_A 563 FPSARNFDYQ 572 (781)
T ss_dssp ESCTTTCCCE
T ss_pred EECCCCCcEE
Confidence 8899888643
No 213
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.80 E-value=9.7 Score=44.90 Aligned_cols=185 Identities=10% Similarity=0.062 Sum_probs=100.0
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEec-------cC
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL-------RG 126 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~-------~~ 126 (981)
.++.++.++.|.-.|.++|+.. ..+... ..+..+...-++..++.++.++.++.||..+|+.+-.... ..
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred EEEEEeCCCeEEEEECCCCeEe--eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence 5889999999999998887653 334322 2233332222344554455677999999999988755421 11
Q ss_pred ccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
... ..+.+- ..+..++.. .|+.+...|..+|+..-+........ ....+ ...+..+...+..| .+
T Consensus 240 ~~V-~~v~~s------pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~s~d~----~i 306 (611)
T 1nr0_A 240 GSV-FGLTWS------PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI--IWTKQALVSISANG----FI 306 (611)
T ss_dssp SCE-EEEEEC------TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE--EECSSCEEEEETTC----CE
T ss_pred CCE-EEEEEC------CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE--EEcCCEEEEEeCCC----cE
Confidence 111 111111 113334434 48999999999998877665432111 11122 12444555444444 36
Q ss_pred EEEECCCCceeeeeeeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEeecCe
Q 002016 205 YQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
...|+.+|+..-...- -...+. .+.+- .+..++... .++.+++-++.++.
T Consensus 307 ~~~~~~~~~~~~~~~g-h~~~v~-~l~~spdg~~l~s~s-~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYG-HNKAIT-ALSSSADGKTLFSAD-AEGHINSWDISTGI 357 (611)
T ss_dssp EEEETTTTEEEEEECC-CSSCEE-EEEECTTSSEEEEEE-TTSCEEEEETTTCC
T ss_pred EEEeCCCCCcceEEcC-CCCCEE-EEEEeCCCCEEEEEe-CCCcEEEEECCCCc
Confidence 7778888764422210 001111 11121 234555554 45778877877765
No 214
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.70 E-value=22 Score=40.66 Aligned_cols=108 Identities=15% Similarity=0.236 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
++..+++++.+|.|.-.|. +|+.+....-... .+..+....++..++.++.++.++.||. +|+.+-......... .
T Consensus 191 ~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~-~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v-~ 266 (577)
T 2ymu_A 191 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-N 266 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCE-E
T ss_pred CCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCC-CEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCE-E
Confidence 4556889999999998884 7777665443222 2333322223344444555679999995 677766554433222 1
Q ss_pred CceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEE
Q 002016 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTR 170 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~ 170 (981)
...+. ..+..++.. .++.+...|. +|+..-..
T Consensus 267 ~v~~~------~d~~~l~~~~~d~~i~~w~~-~~~~~~~~ 299 (577)
T 2ymu_A 267 GVAFR------PDGQTIASASDDKTVKLWNR-NGQLLQTL 299 (577)
T ss_dssp EEEEC------TTSSEEEEEETTSCEEEEET-TSCEEEEE
T ss_pred EEEEc------CCCCEEEEEeCCCEEEEEeC-CCcEEEEE
Confidence 11111 112334444 4777777774 55554444
No 215
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=91.62 E-value=1.4 Score=48.78 Aligned_cols=152 Identities=7% Similarity=-0.031 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEE------cCCC-cceeeeeeeecC-eEEEEEccCCEEEEEeCCCCcE----e
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHV------LGIN-DVVDGIDIALGK-YVITLSSDGSTLRAWNLPDGQM----V 119 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~------l~~~-~~i~~l~~~~~~-~vV~Vs~~g~~V~A~da~tG~l----l 119 (981)
++..++.+ .+|.|.-.|.+++...++.. +... ..+..+...-.+ ..++.++.++.|+.||..+|+. .
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 34556666 89999999999766666542 2111 123333112222 4566566678999999999987 5
Q ss_pred EEEeccCc------------cccCCceeecccccccCCcEEEEEeCCEEEEEECCC-CcEeEEEeccCccee--------
Q 002016 120 WESFLRGS------------KHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSID-GEILWTRDFAAESVE-------- 178 (981)
Q Consensus 120 We~~~~~~------------~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~t-G~~~W~~~~~~~~~~-------- 178 (981)
........ .. ..+.+- ..+..++..++|.+..+|..+ |+.+-++........
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v-~~~~~s------~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSI-SDVKFS------HSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEN 339 (447)
T ss_dssp EEECCC-----CCHHHHHTTCE-EEEEEC------TTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHT
T ss_pred eEeccCCCccccccccccCceE-EEEEEC------CCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccc
Confidence 55554432 11 111111 123345555569999999987 776655544321100
Q ss_pred -----eeEEEEeecCCeEEEEEecCCceeEEEEEECCCCcee
Q 002016 179 -----VQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 179 -----~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~l 215 (981)
...+..+..+..++..+.+| .+...|..+|+.+
T Consensus 340 ~~i~~~~~~~~s~~~~~l~s~s~dg----~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 340 DCIFDKFECCWNGSDSVVMTGSYNN----FFRMFDRNTKRDI 377 (447)
T ss_dssp SGGGCCCCEEECTTSSEEEEECSTT----EEEEEETTTCCEE
T ss_pred cccccceEEEECCCCCEEEEeccCC----EEEEEEcCCCcce
Confidence 01122123334443322223 5888899998876
No 216
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.53 E-value=16 Score=38.74 Aligned_cols=190 Identities=6% Similarity=-0.038 Sum_probs=101.4
Q ss_pred CCCEEEEEcCC----------CEEEEEECCCCccceEEEcCCCcc-eeeeeeeecCeEEEEEccC-----CEEEEEeCCC
Q 002016 52 GRKRVVVSTEE----------NVIASLDLRHGEIFWRHVLGINDV-VDGIDIALGKYVITLSSDG-----STLRAWNLPD 115 (981)
Q Consensus 52 ~~~~VyvaT~~----------g~L~ALd~~tG~ivWR~~l~~~~~-i~~l~~~~~~~vV~Vs~~g-----~~V~A~da~t 115 (981)
.++.||+.... +.+..+|+.+++ |+..-+.+.. .....+..++.++++||.+ ..+..+|..+
T Consensus 69 ~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp ETTEEEEECCEEEETTEEEECCCEEEEETTTTE--EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTT
T ss_pred ECCEEEEECCCcCCCCCCeecceEEEECCCCCe--EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCC
Confidence 46788887653 468999999875 9876433211 1111123566777766631 3688999887
Q ss_pred CcEeEEEeccCccccCCceeecccccccCCcEEEEEe-------CCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeec
Q 002016 116 GQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDE 187 (981)
Q Consensus 116 G~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-------~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~ 187 (981)
+ .|+.-...+..-..... ..-++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+ ...
T Consensus 147 ~--~W~~~~~~p~~r~~~~~------~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~ 214 (308)
T 1zgk_A 147 D--EWHLVAPMLTRRIGVGV------AVLNRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGV--CVL 214 (308)
T ss_dssp T--EEEECCCCSSCCBSCEE------EEETTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEE--EEE
T ss_pred C--eEeECCCCCccccceEE------EEECCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceE--EEE
Confidence 6 47754322111000001 11245666653 245888998776 58765432211 11112 235
Q ss_pred CCeEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccC-ceEEEcCcEEEEEEC----CCCeEEEEEeecCe
Q 002016 188 SDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDT----TRSILVTVSFKNRK 257 (981)
Q Consensus 188 ~~~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~----~~g~L~v~~L~sg~ 257 (981)
++.+|++|-..+. .-.+..+|+.++ .|+..-..|..... .+.+.++.+++..-. ....+.+.|+++++
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 7889988743211 134889999876 58764444444333 233334433333210 12356677776665
No 217
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.50 E-value=16 Score=41.50 Aligned_cols=150 Identities=8% Similarity=-0.016 Sum_probs=74.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEcc-C----CEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD-G----STLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~-g----~~V~A~da~tG~llWe~~~~~~ 127 (981)
++.||+++..+.|..+|++++.+. ..........++.....++.++++.. + ..+..++. +|...+...+...
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~--~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~ 225 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVS--TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKG 225 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEE--EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEEC
T ss_pred CCeEEEEeCCCcEEEEECCCCEEE--EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccC
Confidence 467999988889999999887642 22222111223312223455666543 1 13455554 4554433222211
Q ss_pred cccCCceeecccccccC-CcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 128 KHSKPLLLVPTNLKVDK-DSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~-~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
..+.++. .+. ++.+++. .+++|++++..++...-....+... .|..+.....++.+|+..... ..+..
T Consensus 226 ~~p~gia-------vdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~-~P~gia~~pdG~~lyv~d~~~-~~I~~ 296 (430)
T 3tc9_A 226 QNCNGAE-------THPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG-WEFHIQFHPSGNYAYIVVVNQ-HYILR 296 (430)
T ss_dssp SSCCCEE-------ECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS-CCEEEEECTTSSEEEEEETTT-TEEEE
T ss_pred CCceEEE-------EeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC-cceeEEEcCCCCEEEEEECCC-CEEEE
Confidence 1101111 122 4567775 4889999999888752222222211 144443223444588765433 33344
Q ss_pred EEEECCCCce
Q 002016 205 YQINAMNGEL 214 (981)
Q Consensus 205 ~aLd~~tG~~ 214 (981)
..+|..+|+.
T Consensus 297 ~~~d~~~~~~ 306 (430)
T 3tc9_A 297 SDYDWKTKRL 306 (430)
T ss_dssp EEEETTTTEE
T ss_pred EeCCcccccc
Confidence 4455545554
No 218
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.47 E-value=31 Score=41.96 Aligned_cols=152 Identities=10% Similarity=0.093 Sum_probs=86.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCC-----cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc-C
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-----DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR-G 126 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-----~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~-~ 126 (981)
++.++++|..+-|..+|+.++...+-...... ..+..+ ....++.+.+++.++.|..||..+|+..+-.... .
T Consensus 320 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i-~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~ 398 (795)
T 4a2l_A 320 QGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCI-VEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDE 398 (795)
T ss_dssp TSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEE-EECTTSCEEEEESSSCEEEECTTTCCEEEECCC---
T ss_pred CcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEE-EECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCC
Confidence 56799999988899999988764332221111 112233 2344566777776657999999998765432211 0
Q ss_pred c--cccCCceeecccccccCCcE-EEEEe-CCEEEEEECCCCcEeEEEeccCcce---eeeEEEEeecCCeEEEEEecCC
Q 002016 127 S--KHSKPLLLVPTNLKVDKDSL-ILVSS-KGCLHAVSSIDGEILWTRDFAAESV---EVQQVIQLDESDQIYVVGYAGS 199 (981)
Q Consensus 127 ~--~~s~~~~~v~~~~~~~~~~~-V~V~~-~g~l~aLd~~tG~~~W~~~~~~~~~---~~~~vv~s~~~~~Vyvvg~~g~ 199 (981)
+ .++... +.. ...+.++. +.+.+ ++.|+.+|..+|+. +.+....+.+ .+..+. ...++.+++.+..|
T Consensus 399 ~~~~l~~~~-v~~--i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~-~d~~g~lwigt~~G- 472 (795)
T 4a2l_A 399 SARGIGSNN-IKA--VYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAIL-PDGEGNLWLGTLSA- 472 (795)
T ss_dssp ---CCSCSC-EEE--EEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEE-ECSSSCEEEEESSC-
T ss_pred cccCCCCcc-EEE--EEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEE-ECCCCCEEEEecCc-
Confidence 0 010011 100 01133555 77765 68899999999874 3333211111 122222 23467888876633
Q ss_pred ceeEEEEEECCCCcee
Q 002016 200 SQFHAYQINAMNGELL 215 (981)
Q Consensus 200 ~~~~v~aLd~~tG~~l 215 (981)
+..+|+.+|+..
T Consensus 473 ----l~~~~~~~~~~~ 484 (795)
T 4a2l_A 473 ----LVRFNPEQRSFT 484 (795)
T ss_dssp ----EEEEETTTTEEE
T ss_pred ----eeEEeCCCCeEE
Confidence 899999988654
No 219
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.38 E-value=5 Score=49.11 Aligned_cols=152 Identities=11% Similarity=0.145 Sum_probs=84.2
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC--CcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc--Ccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI--NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR--GSK 128 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~--~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~--~~~ 128 (981)
++.++++|..+-|..+|+++++. +..... ...+..+ ....++.+.+++.++.+..+|..+++...-.... ...
T Consensus 183 ~g~lwigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~i~~i-~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 259 (795)
T 4a2l_A 183 GDQIYIGTSTDGLYTYSITQKTF--EKVIPILGTKQIQAI-LQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKS 259 (795)
T ss_dssp TTEEEEEESSSCEEEEETTTCCE--EECC----CCCEEEE-EEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTS
T ss_pred CCCEEEEECCCCEEEEeCCCCeE--EEecCCCCCCeeEEE-EEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccc
Confidence 67899999875699999988864 322111 1123333 2344556666664445999999888754321111 011
Q ss_pred ccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccC--cce---eeeEEEEeecCCeEEEEEecCCceeE
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAA--ESV---EVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~--~~~---~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
++... +. ....+.++.+.+.+.+.|..+|..+++...-...+. ..+ ....+ .....+.+++.+..++
T Consensus 260 l~~~~-i~--~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i-~~D~~g~lWigt~~~G---- 331 (795)
T 4a2l_A 260 ISSNY-IR--SLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSI-FMDSQGGMWLGTYFGG---- 331 (795)
T ss_dssp CSCSB-EE--EEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEE-EECTTSCEEEEESSSC----
T ss_pred cCCCe-EE--EEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEE-EEeCCcCEEEEECCCC----
Confidence 11111 10 001234566777765579999999887554322211 111 12222 1346788888666555
Q ss_pred EEEEECCCCcee
Q 002016 204 AYQINAMNGELL 215 (981)
Q Consensus 204 v~aLd~~tG~~l 215 (981)
+..+|..++...
T Consensus 332 l~~~~~~~~~~~ 343 (795)
T 4a2l_A 332 LNYYHPIRNRFK 343 (795)
T ss_dssp EEEECGGGGSSE
T ss_pred eEEeCCCcccce
Confidence 888888877654
No 220
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.34 E-value=9 Score=43.59 Aligned_cols=147 Identities=10% Similarity=0.127 Sum_probs=74.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccC-----CEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG-----STLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g-----~~V~A~da~tG~llWe~~~~~~ 127 (981)
++.||+++..+.|..+|+++|++.-- ........++.....++ ++++..+ ..+..++...+. .+...+...
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~--~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~-~~~~~~~~~ 227 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIK--TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF-TERLSLCNA 227 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEE--CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT-CCEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEe--ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe-ecccccccc
Confidence 47899998779999999998875422 22111122332222334 5555432 235555554332 222221111
Q ss_pred cccCCceeecccccccC-CcEEEEE--eCCEEEEEECCCCcEeEEEecc-CcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 128 KHSKPLLLVPTNLKVDK-DSLILVS--SKGCLHAVSSIDGEILWTRDFA-AESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~-~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~-~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
..+.+.. .+. ++.+++. .+++|+++|..+|...+..... .... +..+.....++.+|+...... +
T Consensus 228 ~~P~gia-------vd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYvad~~~~---~ 296 (433)
T 4hw6_A 228 RGAKTCA-------VHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYIIYNGKH---C 296 (433)
T ss_dssp SSBCCCE-------ECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEEEETTTT---E
T ss_pred CCCCEEE-------EeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEEEeCCCC---E
Confidence 1101111 122 4567775 4789999999999885443221 1111 112322234455887654332 4
Q ss_pred EEEEE--CCCCce
Q 002016 204 AYQIN--AMNGEL 214 (981)
Q Consensus 204 v~aLd--~~tG~~ 214 (981)
+..+| ..+|..
T Consensus 297 I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 297 IYRVDYNRETGKL 309 (433)
T ss_dssp EEEEEBCTTTCCB
T ss_pred EEEEeCCCCCccc
Confidence 66655 445654
No 221
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.20 E-value=19 Score=38.97 Aligned_cols=144 Identities=13% Similarity=0.066 Sum_probs=73.1
Q ss_pred CCEEEEEcCCCEEEEEECCCC-ccceEEEcCCCcceeeeeeeecCeEEEE-EccCCEEEEEeCCCCcE------------
Q 002016 53 RKRVVVSTEENVIASLDLRHG-EIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQM------------ 118 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG-~ivWR~~l~~~~~i~~l~~~~~~~vV~V-s~~g~~V~A~da~tG~l------------ 118 (981)
.+.++++. ++.+...|..++ +.+.+... +..+..+ ..+.+++. ++.++.|+.||..+|+.
T Consensus 110 ~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~--~~~~~~~---s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~ 183 (355)
T 3vu4_A 110 REFIVVSY-GDVISVFKFGNPWKRITDDIR--FGGVCEF---SNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKA 183 (355)
T ss_dssp SSEEEEEE-TTEEEEEESSTTCCBSSCCEE--EEEEEEE---ETTEEEEEESSCTTCEEEEECCC---------------
T ss_pred CCEEEEEE-cCEEEEEECCCCceeeEEecc--CCceEEE---EccEEEEeCCCcCcEEEEEECCCCCccccccccccccc
Confidence 44555554 567888888888 66655433 1111111 12344443 34568999999998872
Q ss_pred ----eEEEeccCccccCCceeecccccccCCcEEEEE-eCCE-EEEEECCCCcEeEEEecc-CcceeeeEEEEeecCCeE
Q 002016 119 ----VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGC-LHAVSSIDGEILWTRDFA-AESVEVQQVIQLDESDQI 191 (981)
Q Consensus 119 ----lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~-l~aLd~~tG~~~W~~~~~-~~~~~~~~vv~s~~~~~V 191 (981)
+-......... ..+.+- ..+..++.. .||. +.-.|..+|+.+-+.... ... ....+..+.++..+
T Consensus 184 ~~p~~~~~~~h~~~v-~~~~~s------~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 184 ILGKGVLIKAHTNPI-KMVRLN------RKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKL 255 (355)
T ss_dssp ---CCEEECCCSSCE-EEEEEC------TTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-CEEEEEECTTSCEE
T ss_pred cCcccEEEEccCCce-EEEEEC------CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEE
Confidence 22222222111 111111 113333334 4887 999999999998888732 111 12223222233334
Q ss_pred EEEEecCCceeEEEEEECCCCce
Q 002016 192 YVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 192 yvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
...+.+| .+...|..++..
T Consensus 256 ~s~s~d~----~v~iw~~~~~~~ 274 (355)
T 3vu4_A 256 AVVSDKW----TLHVFEIFNDQD 274 (355)
T ss_dssp EEEETTC----EEEEEESSCCSC
T ss_pred EEEECCC----EEEEEEccCCCC
Confidence 3333333 477778776643
No 222
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.20 E-value=17 Score=38.40 Aligned_cols=150 Identities=13% Similarity=0.076 Sum_probs=77.4
Q ss_pred CCEEEEEcCC-----CEEEEEECCCCccceEEEc--CCCcceeeeeeeecCeEEEEEcc-------CCEEEEEeCCCCcE
Q 002016 53 RKRVVVSTEE-----NVIASLDLRHGEIFWRHVL--GINDVVDGIDIALGKYVITLSSD-------GSTLRAWNLPDGQM 118 (981)
Q Consensus 53 ~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l--~~~~~i~~l~~~~~~~vV~Vs~~-------g~~V~A~da~tG~l 118 (981)
++++|+++.. +.|..+|+++|+.. +... .....+..+ ....++.++++.. .+.|+.+|..+|+.
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~i-~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQ-DIIEDLSTAYCIDDM-VFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCE-EEECSSSSCCCEEEE-EECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEE-EEEccCccCCcccce-EECCCCCEEEEeccccccCCCceEEEEeCCCCEE
Confidence 5678888755 48999999888753 1211 111112222 1222334444433 25799999877765
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEEe--CCEEEEEECC-CCcEeEEEe------ccCcceeeeEEEEeecCC
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI-DGEILWTRD------FAAESVEVQQVIQLDESD 189 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~-tG~~~W~~~------~~~~~~~~~~vv~s~~~~ 189 (981)
.--....... ....+- ..++.+++.. ++.|+.+|.. +|....... .... ..+..+. ...++
T Consensus 175 ~~~~~~~~~~--~~i~~~------~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~-~d~~G 244 (333)
T 2dg1_A 175 TPIIQNISVA--NGIALS------TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC-IDSDD 244 (333)
T ss_dssp EEEEEEESSE--EEEEEC------TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE-EBTTC
T ss_pred EEeecCCCcc--cceEEC------CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE-ECCCC
Confidence 4221110000 111111 1133566653 6899999986 465444321 1111 1233332 23567
Q ss_pred eEEEEEecCCceeEEEEEECCCCceeeee
Q 002016 190 QIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 190 ~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
.+|+....++ .|..+|+ +|+.+...
T Consensus 245 ~l~v~~~~~~---~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 245 NLYVAMYGQG---RVLVFNK-RGYPIGQI 269 (333)
T ss_dssp CEEEEEETTT---EEEEECT-TSCEEEEE
T ss_pred CEEEEEcCCC---EEEEECC-CCCEEEEE
Confidence 7887665432 4888898 68776655
No 223
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=91.16 E-value=16 Score=38.66 Aligned_cols=70 Identities=11% Similarity=0.122 Sum_probs=47.0
Q ss_pred CCCEEEEE-cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEe
Q 002016 52 GRKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESF 123 (981)
Q Consensus 52 ~~~~Vyva-T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~ 123 (981)
+++++|+. .+.+.|+.||+. |++..+..+.......++ ...+++.++|+. ..+.++.++..+...+|...
T Consensus 37 ~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI-a~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~ 108 (255)
T 3qqz_A 37 QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETI-EYIGDNQFVISDERDYAIYVISLTPNSEVKILK 108 (255)
T ss_dssp TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEE-EECSTTEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHe-EEeCCCEEEEEECCCCcEEEEEcCCCCeeeeee
Confidence 36789974 567899999997 998888877643234455 234556666654 34688888876555566543
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=91.05 E-value=8.3 Score=41.83 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=59.7
Q ss_pred CCEEEEEcC---CC--EEEEEECCCCccc----eEEEcCCC-cceeeeeeeecCeEEEE-Ecc-----CCEEEEEeCCCC
Q 002016 53 RKRVVVSTE---EN--VIASLDLRHGEIF----WRHVLGIN-DVVDGIDIALGKYVITL-SSD-----GSTLRAWNLPDG 116 (981)
Q Consensus 53 ~~~VyvaT~---~g--~L~ALd~~tG~iv----WR~~l~~~-~~i~~l~~~~~~~vV~V-s~~-----g~~V~A~da~tG 116 (981)
++++|++.. .+ .|.-++ +|++. |....... ....++ ....++.+++ ... +.+|..||..+|
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv-~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg 103 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGI-KSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN 103 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEE-EECSSSEEEEEECHHHHTSCCEEEEEETTTT
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEE-EEcCCCcEEEEcCCCCcCCCCeEEEEECCCC
Confidence 678888842 23 788888 77643 21100000 012233 1233344444 322 469999999999
Q ss_pred cEeEEEeccCccccCCceeeccccccc-CCcEEEEE-----eCCEEEEEECCCCcEeEEE
Q 002016 117 QMVWESFLRGSKHSKPLLLVPTNLKVD-KDSLILVS-----SKGCLHAVSSIDGEILWTR 170 (981)
Q Consensus 117 ~llWe~~~~~~~~s~~~~~v~~~~~~~-~~~~V~V~-----~~g~l~aLd~~tG~~~W~~ 170 (981)
+++-...+..... ..... +.....+ .++.+++. .++.++.+|..+|+. |+.
T Consensus 104 ~~~~~~~~~~~~~-~~~~~-~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~ 160 (343)
T 2qe8_A 104 QLSRVIYLPPPIT-LSNSF-VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARV 160 (343)
T ss_dssp EEEEEEECCTTTS-CTTCC-CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEE
T ss_pred eEEEEEECChhhc-ccccc-cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEE
Confidence 9876666643221 00000 0000112 24577775 357899999998874 654
No 225
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.00 E-value=6.9 Score=47.12 Aligned_cols=155 Identities=14% Similarity=0.117 Sum_probs=81.7
Q ss_pred CCCEEEEEcC-----CCEEEEEECCC------CccceEEEcCCCcceeeeeeeecCeEEEEEccC---CEEEEEeCCCCc
Q 002016 52 GRKRVVVSTE-----ENVIASLDLRH------GEIFWRHVLGINDVVDGIDIALGKYVITLSSDG---STLRAWNLPDGQ 117 (981)
Q Consensus 52 ~~~~VyvaT~-----~g~L~ALd~~t------G~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g---~~V~A~da~tG~ 117 (981)
+++.|++.+. .+.|+.+|+.+ |+..|+......+.....--..++.+++.+..+ ..|+.||..+|.
T Consensus 243 Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 243 DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 4555666654 57899999988 766677665544322221113455566666533 479999998886
Q ss_pred E-eEEEeccCccccCCceeecccccccCCcEEEE-E-eCC--EEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEE
Q 002016 118 M-VWESFLRGSKHSKPLLLVPTNLKVDKDSLILV-S-SKG--CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIY 192 (981)
Q Consensus 118 l-lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V-~-~~g--~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vy 192 (981)
. .|+.-+..... ....-+ . ...++.+++ . .+| +|+.+|..+|+..-+...+.... ..+..+..++.++
T Consensus 323 ~~~~~~l~~~~~~-~~~~~~---~-~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v--~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 323 ESKWKVLVPEHEK-DVLEWV---A-CVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV--VGYSGQKKDTEIF 395 (710)
T ss_dssp GGGCEEEECCCSS-CEEEEE---E-EETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE--EEEECCTTCSEEE
T ss_pred cccceeccCCCCC-CeEEEE---E-EEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE--EEEecCCCCCEEE
Confidence 4 57655443210 001001 0 011334444 3 355 67888887888665554442211 1221112334455
Q ss_pred EEEecCCceeEEEEEECCCCc
Q 002016 193 VVGYAGSSQFHAYQINAMNGE 213 (981)
Q Consensus 193 vvg~~g~~~~~v~aLd~~tG~ 213 (981)
+.......-..++.+|+.+|+
T Consensus 396 ~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 396 YQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECSSCCCEEEEEETTSSS
T ss_pred EEEeCCCCCCEEEEEECCCCc
Confidence 432222222357888888887
No 226
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=90.75 E-value=15 Score=37.08 Aligned_cols=102 Identities=11% Similarity=-0.054 Sum_probs=57.7
Q ss_pred cCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCC-CcEeEEEeccCcceeeeEE
Q 002016 104 DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSID-GEILWTRDFAAESVEVQQV 182 (981)
Q Consensus 104 ~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~t-G~~~W~~~~~~~~~~~~~v 182 (981)
.++.++.||..+|+............ .+.+- ..+..+++..++.++.+|..+ |+..-........ .+..+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~--~~~~s------pdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~ 90 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE--APNWS------PDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATI-CNNDH 90 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE--EEEEC------TTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCC-BCSCC
T ss_pred cceeEEEEeCCCCceeeeccCCcceE--eeEEC------CCCCEEEEEcCCeEEEEeCCCCCCceEeccccccc-cccce
Confidence 45789999999999886555433221 12222 123445555799999999999 8765332222111 11122
Q ss_pred EEeecCCeEEEEEecCCceeEEEEEECCCCce
Q 002016 183 IQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 183 v~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
..+..+..+++.+........+..+|..+|+.
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTP 122 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCCC
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCce
Confidence 22334555555443322245788899888764
No 227
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=90.65 E-value=5.4 Score=47.59 Aligned_cols=104 Identities=8% Similarity=-0.032 Sum_probs=54.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCC-----------------cceeeeeeeecCeEEEEEccCCEEEEEeCCC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-----------------DVVDGIDIALGKYVITLSSDGSTLRAWNLPD 115 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-----------------~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~t 115 (981)
++.++..+.+| | .+|++||+.+=+..++.. ..+..+...-+ +.++++.+ +.++.||..+
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~-~~i~~~d~~~ 110 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ-GGLVGFDMLA 110 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET-TEEEEEETTT
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC-CEEEEEECCC
Confidence 55677777777 7 999999985101111110 11222211223 44444544 6999999999
Q ss_pred CcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCC-----CcEeE
Q 002016 116 GQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSID-----GEILW 168 (981)
Q Consensus 116 G~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~t-----G~~~W 168 (981)
|+..--....... ..+.+-| + +..++...++.|+.+|..+ |+..-
T Consensus 111 ~~~~~l~~~~~~~--~~~~~Sp-----d-G~~la~~~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 111 RKVTYLFDTNEET--ASLDFSP-----V-GDRVAYVRNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp TEEEEEECCTTCC--TTCEECT-----T-SSEEEEEETTEEEEEECBCTTSCCCCCEE
T ss_pred CceEEccCCcccc--cCCcCCC-----C-CCEEEEEECCeEEEEecCcccccCCCcEE
Confidence 9875443332221 1222221 2 3345555789999999998 87653
No 228
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.57 E-value=17 Score=38.66 Aligned_cols=159 Identities=10% Similarity=0.038 Sum_probs=84.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEE-cCCCc-ceeeeeeeecCeEEEEEccC----C-------EEEEEeCCCCcEe
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHV-LGIND-VVDGIDIALGKYVITLSSDG----S-------TLRAWNLPDGQMV 119 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~-l~~~~-~i~~l~~~~~~~vV~Vs~~g----~-------~V~A~da~tG~ll 119 (981)
.+.||+....+ +.++|+.+++ |+.. +..+. ......+..++.++++||.. + .+..+|+.++ .
T Consensus 15 ~~~i~~~GG~~-~~~yd~~~~~--W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~ 89 (318)
T 2woz_A 15 KDLILLVNDTA-AVAYDPMENE--CYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--E 89 (318)
T ss_dssp EEEEEEECSSE-EEEEETTTTE--EEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--E
T ss_pred cchhhhccccc-eEEECCCCCc--eecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--c
Confidence 34677776654 8999999986 9872 11111 01111123466677777721 1 2788898776 4
Q ss_pred EEEeccCccccCCceeecccccccCCcEEEEEe--C-------CEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCC
Q 002016 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K-------GCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESD 189 (981)
Q Consensus 120 We~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~-------g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~ 189 (981)
|+.-..-+. +. . .+....-++.+++.+ + ..+..+|..++ .|+.-.+.+.- ....+ ...++
T Consensus 90 W~~~~~~p~---~r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~~ 159 (318)
T 2woz_A 90 WVGLPPLPS---AR--C-LFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLPIKVYGHNV--ISHNG 159 (318)
T ss_dssp EEECSCBSS---CB--C-SCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCSSCEESCEE--EEETT
T ss_pred EEECCCCCc---cc--c-ccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCCCcccccEE--EEECC
Confidence 765422111 11 0 001111245566652 1 35888888876 58765432221 11112 23678
Q ss_pred eEEEEEecC---CceeEEEEEECCCCceeeeeeeeccCCccC
Q 002016 190 QIYVVGYAG---SSQFHAYQINAMNGELLNHETAAFSGGFVG 228 (981)
Q Consensus 190 ~Vyvvg~~g---~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~ 228 (981)
.+|++|-.. ...-.+..+|+.++ .|+..-..|.....
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~ 199 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSM 199 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTT--EEEEECCCSSCCBS
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCC--EEEECCCCCCCccc
Confidence 899876431 11124888999876 48775444444433
No 229
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.98 E-value=4.8 Score=44.47 Aligned_cols=153 Identities=12% Similarity=0.135 Sum_probs=84.1
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCC----C--c-ceeeeeee--ecCe-EEEEEc-------------cCCEE
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGI----N--D-VVDGIDIA--LGKY-VITLSS-------------DGSTL 108 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~----~--~-~i~~l~~~--~~~~-vV~Vs~-------------~g~~V 108 (981)
++++|+++ ..+.|+++|+.+|.. ....++. . . ...|+..- ..++ ++++.. ..+.|
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v 102 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSH-FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSF 102 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCE-EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeE-EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEE
Confidence 68899999 689999999976643 4554432 1 1 12355321 1234 444332 14689
Q ss_pred EEEeCC---CCcEeEEEeccCcccc-----CCceeecccccccCCcEEEEE--eC-CEEEEEECCCCc-EeEEEeccCcc
Q 002016 109 RAWNLP---DGQMVWESFLRGSKHS-----KPLLLVPTNLKVDKDSLILVS--SK-GCLHAVSSIDGE-ILWTRDFAAES 176 (981)
Q Consensus 109 ~A~da~---tG~llWe~~~~~~~~s-----~~~~~v~~~~~~~~~~~V~V~--~~-g~l~aLd~~tG~-~~W~~~~~~~~ 176 (981)
.++|+. ||+.+|...+....-. ......+.....+.++.+||. .. +.++++++..-. ..|-...+...
T Consensus 103 ~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~ 182 (334)
T 2p9w_A 103 HSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGG 182 (334)
T ss_dssp EEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSS
T ss_pred EEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcc
Confidence 999999 9999999998631100 000000111112445667884 47 899999965332 34765443211
Q ss_pred --eeeeEEEEeecCCeEEEEEecCCceeEEEEEECC
Q 002016 177 --VEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (981)
Q Consensus 177 --~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~ 210 (981)
..+..++....+..+++... ++ +++++|+.
T Consensus 183 ~~~G~nGIv~~pdg~~Liv~~~-~g---~L~~fD~~ 214 (334)
T 2p9w_A 183 QRPGYSGITFDPHSNKLIAFGG-PR---ALTAFDVS 214 (334)
T ss_dssp SCCSCSEEEEETTTTEEEEESS-SS---SEEEEECS
T ss_pred cccCcceEEEeCCCCEEEEEcC-CC---eEEEEcCC
Confidence 11223332233445554333 33 58999987
No 230
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=88.80 E-value=11 Score=44.63 Aligned_cols=144 Identities=19% Similarity=0.210 Sum_probs=76.1
Q ss_pred EEEEECCCCccceEEEcCCC-cce-----------e-ee-eee-e-cC--eEEEEEcc--CCEEEEEeCCCCc--EeEEE
Q 002016 65 IASLDLRHGEIFWRHVLGIN-DVV-----------D-GI-DIA-L-GK--YVITLSSD--GSTLRAWNLPDGQ--MVWES 122 (981)
Q Consensus 65 L~ALd~~tG~ivWR~~l~~~-~~i-----------~-~l-~~~-~-~~--~vV~Vs~~--g~~V~A~da~tG~--llWe~ 122 (981)
|..+|-.||+.+|+..+..+ ..+ + .+ .++ . ++ .+|+..+. -..|.|||..+|+ .+|++
T Consensus 235 L~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ 314 (620)
T 2zuy_A 235 LTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVF 314 (620)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEcCCCcceeeecccCCCcCccccccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEe
Confidence 69999999999999988432 111 1 01 011 1 22 24443332 2469999999994 79999
Q ss_pred eccCcc---c-c--CCceeecccccccCCc--EEEEEeCCEEEEEECCCCcEeEEEeccCcceeeeEEEEe--ecCC-eE
Q 002016 123 FLRGSK---H-S--KPLLLVPTNLKVDKDS--LILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQL--DESD-QI 191 (981)
Q Consensus 123 ~~~~~~---~-s--~~~~~v~~~~~~~~~~--~V~V~~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s--~~~~-~V 191 (981)
....+. . . ...+.+. ..+.|+ -|++ ++ .++| .+|+.+|+.....+.. ..+.+. ..++ .|
T Consensus 315 ds~~~~~~~~~gqg~H~~sva---DVDGDG~dEIv~--Gs--~~iD-~dG~~L~st~~gHGDa--~hv~d~dP~rpGlev 384 (620)
T 2zuy_A 315 DSNQPGHEAYAGQGNHSLSVA---DVDGDGKDEIIY--GA--MAVD-HDGTGLYSTGLGHGDA--MHVGDLDPSRKGLEV 384 (620)
T ss_dssp ETTSTTCGGGTTCCCSSCEEE---CCSSSSSCEEEE--TT--EEEC-TTSSEEEECSCCCCSC--EEEECSCTTSSSCEE
T ss_pred cCCCCcccccccccCcCceEE---ecCCCCceeEEE--ee--eEEC-CCCCEEeecCCCCCce--eEEEecCCCCCCCEE
Confidence 875431 1 0 0111111 112222 2332 12 2556 8999999987654332 112110 1123 44
Q ss_pred EEEEecC-CceeEEEEEECCCCceeeeee
Q 002016 192 YVVGYAG-SSQFHAYQINAMNGELLNHET 219 (981)
Q Consensus 192 yvvg~~g-~~~~~v~aLd~~tG~~lw~~~ 219 (981)
|. +..+ ....-+...|+.||+++|+..
T Consensus 385 ~~-~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 385 FQ-VHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp EE-ECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred EE-EecCCCCCCceEEEECCCCcEEEEec
Confidence 43 3322 111115567999999999984
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.54 E-value=4.2 Score=43.22 Aligned_cols=131 Identities=14% Similarity=0.166 Sum_probs=68.2
Q ss_pred CCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccC------CEEEEEeCCCCcEeEEEeccCccccCCcee
Q 002016 62 ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG------STLRAWNLPDGQMVWESFLRGSKHSKPLLL 135 (981)
Q Consensus 62 ~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g------~~V~A~da~tG~llWe~~~~~~~~s~~~~~ 135 (981)
.+.|+.+|+++|++.--..+.. ..++....++..++++... +.++.||...+. +-......... ..
T Consensus 168 ~~~v~~~d~~~g~~~~~~~~~~---p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~-~~--- 239 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMADLDH---PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVP-DG--- 239 (305)
T ss_dssp CEEEEEECSSSCCCEEEEEESS---EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCS-SS---
T ss_pred CCeEEEEcCCCCcEEEEecCCC---CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECC-CC---
Confidence 3689999999997542212211 1233222334455554332 689999987665 22211110000 00
Q ss_pred ecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 136 VPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 136 v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
.|..-..+.++.+++...+.|+.+|. +|+..-.+..+.. +..+......+.+|+.+. + .++.+++
T Consensus 240 ~pdgi~~d~~G~lwv~~~~gv~~~~~-~g~~~~~~~~~~~---~~~~~f~~d~~~L~it~~-~----~l~~~~~ 304 (305)
T 3dr2_A 240 LPDGFCVDRGGWLWSSSGTGVCVFDS-DGQLLGHIPTPGT---ASNCTFDQAQQRLFITGG-P----CLWMLPL 304 (305)
T ss_dssp CCCSEEECTTSCEEECCSSEEEEECT-TSCEEEEEECSSC---CCEEEECTTSCEEEEEET-T----EEEEEEC
T ss_pred CCCeEEECCCCCEEEecCCcEEEECC-CCCEEEEEECCCc---eeEEEEeCCCCEEEEEcC-C----eEEEEEC
Confidence 01111123455677766677999998 7888777766542 223332234556776443 3 2777664
No 232
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.52 E-value=8.3 Score=45.81 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=65.6
Q ss_pred cCCCEEEEEcCCCEEEEEECCCCcc-------ceEEEcCCC---cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcE--
Q 002016 51 TGRKRVVVSTEENVIASLDLRHGEI-------FWRHVLGIN---DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM-- 118 (981)
Q Consensus 51 ~~~~~VyvaT~~g~L~ALd~~tG~i-------vWR~~l~~~---~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~l-- 118 (981)
.+++.+++++++|.|.-.|.++|++ +-....... ..+..+. -..++ ++.++.++.|+.||..+++.
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVa-wSPdg-Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIV-WYEDV-LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEE-EETTE-EEEEETTCCEEEECCCSSSSCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEE-EcCCc-EEEEeCCCeEEEEECCCCcccc
Confidence 3677899999999999999999864 222222221 1233331 23345 54466678999999988885
Q ss_pred eEEEe--ccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcE-eEEE
Q 002016 119 VWESF--LRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEI-LWTR 170 (981)
Q Consensus 119 lWe~~--~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~-~W~~ 170 (981)
.|+.- .....+ .++.+ . +..++..+++++.-.|..+|+. ....
T Consensus 217 ~~~tL~~~h~~~V-~svaF-------s-g~~LASa~~~tIkLWd~~~~~~~~~~~ 262 (588)
T 2j04_A 217 VSRMIQNASRRKI-TDLKI-------V-DYKVVLTCPGYVHKIDLKNYSISSLKT 262 (588)
T ss_dssp CEEEEECCCSSCC-CCEEE-------E-TTEEEEECSSEEEEEETTTTEEEEEEC
T ss_pred ceeeecccccCcE-EEEEE-------E-CCEEEEEeCCeEEEEECCCCeEEEEEc
Confidence 35442 221111 11211 1 3445555678888888888877 4443
No 233
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=88.27 E-value=32 Score=37.24 Aligned_cols=192 Identities=9% Similarity=0.035 Sum_probs=89.4
Q ss_pred EEEEEcCC--CEEE--EEECCCCccceEEEc--CCCcceeeeeeeecCeEEEEEccCCEEEEEeCC-CCcEeEEEeccCc
Q 002016 55 RVVVSTEE--NVIA--SLDLRHGEIFWRHVL--GINDVVDGIDIALGKYVITLSSDGSTLRAWNLP-DGQMVWESFLRGS 127 (981)
Q Consensus 55 ~VyvaT~~--g~L~--ALd~~tG~ivWR~~l--~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~-tG~llWe~~~~~~ 127 (981)
.+|+++.. +-|+ .+|+++|++.-.... ........+...-++..+++++.+ .++.||.. +|++.........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 47888764 3344 567889976422222 211112233222344556666555 89999987 9988654332211
Q ss_pred cccCCceeecccccccCCcEEE--EE--------------eCCEEEEEECC-CCcEeEEEec---cCcceeeeEEEEeec
Q 002016 128 KHSKPLLLVPTNLKVDKDSLIL--VS--------------SKGCLHAVSSI-DGEILWTRDF---AAESVEVQQVIQLDE 187 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~~~~~V~--V~--------------~~g~l~aLd~~-tG~~~W~~~~---~~~~~~~~~vv~s~~ 187 (981)
.......+- ..++.++ +. .+|.+..++.. +|+..=.... .... .+..+..+.+
T Consensus 83 g~~~~~~~s------pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~spd 155 (365)
T 1jof_A 83 GHPRANDAD------TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT-GIHGMVFDPT 155 (365)
T ss_dssp SSGGGGCTT------SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTC-CEEEEEECTT
T ss_pred CCCccEEEC------CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCC-cceEEEECCC
Confidence 000011111 1133222 22 25667777765 5764322211 1111 1223332334
Q ss_pred CCeEEEEEecCCceeEEEEEECC-CCceeeeeeeeccCCccC-c-eEEE-cCcEEEEEECCCCeEEEEEee--cCe
Q 002016 188 SDQIYVVGYAGSSQFHAYQINAM-NGELLNHETAAFSGGFVG-D-VALV-SSDTLVTLDTTRSILVTVSFK--NRK 257 (981)
Q Consensus 188 ~~~Vyvvg~~g~~~~~v~aLd~~-tG~~lw~~~v~~p~~~~~-~-~~~v-g~~~lv~~d~~~g~L~v~~L~--sg~ 257 (981)
+..+|+.. .+.. .+..+|.. +|+......+..+..-.+ . +.+- .+..+++.+...+.+.+.++. +|+
T Consensus 156 G~~l~~~~-~~~~--~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 156 ETYLYSAD-LTAN--KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp SSEEEEEE-TTTT--EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCEEEEEc-CCCC--EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 44566544 3322 46667776 888643333332210111 1 2222 233566666555677777664 455
No 234
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=88.21 E-value=2.7 Score=47.22 Aligned_cols=154 Identities=9% Similarity=0.022 Sum_probs=78.6
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCc-ceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-VVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~-~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+..++.++.+|.|...|.+++............ .+..+....++..++.++.++.|+.||. +|+.++........+ .
T Consensus 177 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~-~~~~~~~~~~h~~~v-~ 254 (435)
T 4e54_B 177 TNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM-DGKELWNLRMHKKKV-T 254 (435)
T ss_dssp TTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES-SSCBCCCSBCCSSCE-E
T ss_pred CCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc-CcceeEEEecccceE-E
Confidence 567999999999999999877654333222211 1122322234456666777789999997 466666554433222 1
Q ss_pred CceeecccccccCCcEEEE-E-eCCEEEEEECCCCcEeEEEeccCc-ceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 132 PLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAE-SVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~~-~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
.+.+-| . +..+++ . .||.+..+|..+++..-......+ ......+..+..+..++..+.+| .+...|
T Consensus 255 ~v~~~p-----~-~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~----~i~iwd 324 (435)
T 4e54_B 255 HVALNP-----C-CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS----EIRVYS 324 (435)
T ss_dssp EEEECT-----T-CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS----CEEEEE
T ss_pred eeeecC-----C-CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC----EEEEEE
Confidence 111111 1 222333 3 377777777776653211111000 00011111122334444444444 367778
Q ss_pred CCCCceeeee
Q 002016 209 AMNGELLNHE 218 (981)
Q Consensus 209 ~~tG~~lw~~ 218 (981)
..+|+.....
T Consensus 325 ~~~~~~~~~~ 334 (435)
T 4e54_B 325 ASQWDCPLGL 334 (435)
T ss_dssp SSSSSSEEEE
T ss_pred CCCCccceEE
Confidence 8887765443
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=88.14 E-value=31 Score=36.94 Aligned_cols=148 Identities=7% Similarity=0.039 Sum_probs=75.9
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCc---ceeeeeeeecCeEEEEEcc-------CCEEEEEeCCCCcEeEEE
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALGKYVITLSSD-------GSTLRAWNLPDGQMVWES 122 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~---~i~~l~~~~~~~vV~Vs~~-------g~~V~A~da~tG~llWe~ 122 (981)
++++++++..| |+.+|+++|+..--....... .+..+ ....++.+++++. .+.|+.+| +|+..--.
T Consensus 100 dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i-~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~ 175 (326)
T 2ghs_A 100 DSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRSNDG-RMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF 175 (326)
T ss_dssp TTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEEEEE-EECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE
T ss_pred CCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCCCCE-EECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee
Confidence 67788888655 999999999864322221110 12222 1222333444432 24788888 67654321
Q ss_pred eccCccccCCceeecccccccCCcEEEEEe--CCEEEEEECC--CC-c----EeEEEeccCcceeeeEEEEeecCCeEEE
Q 002016 123 FLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI--DG-E----ILWTRDFAAESVEVQQVIQLDESDQIYV 193 (981)
Q Consensus 123 ~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~--tG-~----~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (981)
. ....+....+- ..++.+++.. ++.|++++.. +| + ..+.. .......+..+. ...++.+|+
T Consensus 176 ~--~~~~~~~i~~s------~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~-~~~~~~~p~gi~-~d~~G~lwv 245 (326)
T 2ghs_A 176 A--DISIPNSICFS------PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID-STGIKGGMDGSV-CDAEGHIWN 245 (326)
T ss_dssp E--EESSEEEEEEC------TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE-CTTSSSEEEEEE-ECTTSCEEE
T ss_pred C--CCcccCCeEEc------CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE-CCCCCCCCCeeE-ECCCCCEEE
Confidence 1 10010111111 1133566653 6899999975 77 4 23322 111111133332 235678888
Q ss_pred EEecCCceeEEEEEECCCCceeeee
Q 002016 194 VGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 194 vg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
....++ .|..+|+ +|+.+...
T Consensus 246 a~~~~~---~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 246 ARWGEG---AVDRYDT-DGNHIARY 266 (326)
T ss_dssp EEETTT---EEEEECT-TCCEEEEE
T ss_pred EEeCCC---EEEEECC-CCCEEEEE
Confidence 665433 5888998 78876554
No 236
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.08 E-value=28 Score=36.48 Aligned_cols=190 Identities=12% Similarity=0.049 Sum_probs=101.1
Q ss_pred CCCEEEEEcC------CCEEEEEECCCCccceEEEcCCCccee-eeeeeecCeEEEEEccC-----CEEEEEeCCCCcEe
Q 002016 52 GRKRVVVSTE------ENVIASLDLRHGEIFWRHVLGINDVVD-GIDIALGKYVITLSSDG-----STLRAWNLPDGQMV 119 (981)
Q Consensus 52 ~~~~VyvaT~------~g~L~ALd~~tG~ivWR~~l~~~~~i~-~l~~~~~~~vV~Vs~~g-----~~V~A~da~tG~ll 119 (981)
.++.||+... .+.+..+|+.+++ |+..-+.+..-. ...+..++.++++||.+ ..+..+|..+++
T Consensus 60 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-- 135 (302)
T 2xn4_A 60 MAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE-- 135 (302)
T ss_dssp ETTEEEEESCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE--
T ss_pred ECCEEEEEeCcCCCccccceEEECCCCCc--eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe--
Confidence 4678888764 2468999999875 997654332111 11123567777777643 358899988764
Q ss_pred EEEeccCccccCCceeecccccccCCcEEEEEe---------CCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCC
Q 002016 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS---------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESD 189 (981)
Q Consensus 120 We~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~---------~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~ 189 (981)
|+.-...+.. . . ....+.-++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+ ...++
T Consensus 136 W~~~~~~p~~---r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~~ 205 (302)
T 2xn4_A 136 WFHVAPMNTR---R--S-SVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTN--EWTYIAEMSTRRSGAGV--GVLNN 205 (302)
T ss_dssp EEEECCCSSC---C--B-SCEEEEETTEEEEECCEETTTTEECCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEETT
T ss_pred EeecCCCCCc---c--c-CceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCC--cEEECCCCccccccccE--EEECC
Confidence 8765322111 0 0 001111245566652 134888998876 58765432211 01112 23578
Q ss_pred eEEEEEecCCc--eeEEEEEECCCCceeeeeeeeccCCccC-ceEEEcCcEEEEEECC----CCeEEEEEeecCe
Q 002016 190 QIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT----RSILVTVSFKNRK 257 (981)
Q Consensus 190 ~Vyvvg~~g~~--~~~v~aLd~~tG~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~~----~g~L~v~~L~sg~ 257 (981)
.+|++|-..+. .-.+..+|+.++ .|+..-..|..... .+...++.+++..-.+ ...+.+.|+++++
T Consensus 206 ~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 206 LLYAVGGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEECCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 89988743211 124889999876 47764344433333 2333343333332111 1246677776665
No 237
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=87.84 E-value=3.7 Score=49.24 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=60.9
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcc----eeeeeee-ecCeEEEEEcc--------CCEEEEEeCCCCcEe
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDV----VDGIDIA-LGKYVITLSSD--------GSTLRAWNLPDGQMV 119 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~----i~~l~~~-~~~~vV~Vs~~--------g~~V~A~da~tG~ll 119 (981)
++.+++.+.+|.|...|.++|+. ++.+..... +..+... .|+.+++.+.. ++.++.||..+|+.+
T Consensus 26 dg~~~~~~~d~~i~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 26 GQEYLHQSADNNIVLYNIETGQS--YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSEEEEECTTSCEEEEESSSCCE--EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCeEEEEcCCCCEEEEEcCCCcE--EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 44666677789999999999985 343432211 2222122 34445554431 368999999999874
Q ss_pred EEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEe
Q 002016 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEIL 167 (981)
Q Consensus 120 We~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~ 167 (981)
....+.... ..+.+-| + +..++...++.|+..|..+|+..
T Consensus 104 ~~~~l~~~~--~~~~~SP-----D-G~~la~~~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 104 RGNELPRPI--QYLCWSP-----V-GSKLAYVYQNNIYLKQRPGDPPF 143 (719)
T ss_dssp CSSCCCSSB--CCEEECS-----S-TTCEEEEETTEEEEESSTTSCCE
T ss_pred cceecCccc--ccceECC-----C-CCEEEEEECCeEEEEeCCCCCcE
Confidence 322333221 1222222 2 33444457889999999888753
No 238
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.83 E-value=33 Score=36.95 Aligned_cols=158 Identities=8% Similarity=0.138 Sum_probs=86.5
Q ss_pred CCEEEEEcC--CCEEEEEECCCCccceEEEcCCC-c-ceeeeeeeecCeEEEEEcc-C---------CEEEEEeCCCCcE
Q 002016 53 RKRVVVSTE--ENVIASLDLRHGEIFWRHVLGIN-D-VVDGIDIALGKYVITLSSD-G---------STLRAWNLPDGQM 118 (981)
Q Consensus 53 ~~~VyvaT~--~g~L~ALd~~tG~ivWR~~l~~~-~-~i~~l~~~~~~~vV~Vs~~-g---------~~V~A~da~tG~l 118 (981)
+++||+... .+.+..+|+.+..-.|+..-+.+ . ......+..++.++++||. . +.+..+|+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~- 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS- 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE-
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc-
Confidence 677887653 46899999987667899764433 1 1111113456677776765 1 358999998764
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEEeC-----------------------------------------CEEE
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSK-----------------------------------------GCLH 157 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~-----------------------------------------g~l~ 157 (981)
|+.-...+.. +... ......++.+++.++ ..+.
T Consensus 98 -W~~~~~~~p~----~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (357)
T 2uvk_A 98 -WVKLMSHAPM----GMAG-HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL 171 (357)
T ss_dssp -EEECSCCCSS----CCSS-EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred -EEECCCCCCc----cccc-ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence 8765432201 0000 000112456777532 5789
Q ss_pred EEECCCCcEeEEEeccCcc--eeeeEEEEeecCCeEEEEEecCC---ceeEEEEEECCCCceeeeeeee
Q 002016 158 AVSSIDGEILWTRDFAAES--VEVQQVIQLDESDQIYVVGYAGS---SQFHAYQINAMNGELLNHETAA 221 (981)
Q Consensus 158 aLd~~tG~~~W~~~~~~~~--~~~~~vv~s~~~~~Vyvvg~~g~---~~~~v~aLd~~tG~~lw~~~v~ 221 (981)
.+|..+. .|+.-.+.+. .....+ ...++.+|++|-..+ ..-.+..+|.......|+..-.
T Consensus 172 ~yd~~~~--~W~~~~~~p~~~~~~~~~--~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 172 SFDPSTQ--QWSYAGESPWYGTAGAAV--VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp EEETTTT--EEEEEEECSSCCCBSCEE--EEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred EEeCCCC--cEEECCCCCCCCcccccE--EEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 9998876 6876543221 110122 245788988764210 1124677776445556887433
No 239
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=87.64 E-value=30 Score=36.35 Aligned_cols=146 Identities=10% Similarity=0.081 Sum_probs=71.5
Q ss_pred CCE-EEEEcCCCEEEEEECCCCcc-ceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccCc-c
Q 002016 53 RKR-VVVSTEENVIASLDLRHGEI-FWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGS-K 128 (981)
Q Consensus 53 ~~~-VyvaT~~g~L~ALd~~tG~i-vWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~~-~ 128 (981)
++. +++.+..|.|..+|+ +|+. .|+. . .....++ ....++.++++. .++.|..||.. |+...-...... .
T Consensus 56 g~~l~~~d~~~~~i~~~~~-~g~~~~~~~--~-~~~~~gl-~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 56 QRTLVWSDLVGRRVLGWRE-DGTVDVLLD--A-TAFTNGN-AVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKR 129 (305)
T ss_dssp GTEEEEEETTTTEEEEEET-TSCEEEEEE--S-CSCEEEE-EECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEE
T ss_pred CCEEEEEECCCCEEEEEeC-CCCEEEEeC--C-CCcccee-eECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCc
Confidence 444 455567789999998 6652 2332 1 1122344 223233344454 34689999985 875443221111 0
Q ss_pred ccCCceeecccccccCCcEEEEE-------------------eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCC
Q 002016 129 HSKPLLLVPTNLKVDKDSLILVS-------------------SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESD 189 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~~~~V~V~-------------------~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~ 189 (981)
....-.++ .+.++.+++. ..+.|+++|.++|+..--..... +..+..+.++.
T Consensus 130 ~~~~~~i~-----~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~----p~gl~~spdg~ 200 (305)
T 3dr2_A 130 LNSPNDLI-----VARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDH----PNGLAFSPDEQ 200 (305)
T ss_dssp CSCCCCEE-----ECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESS----EEEEEECTTSS
T ss_pred cCCCCCEE-----ECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCC----CcceEEcCCCC
Confidence 00000011 1334556662 13689999998887542222111 22332233455
Q ss_pred eEEEEEecCC--ceeEEEEEECCCCc
Q 002016 190 QIYVVGYAGS--SQFHAYQINAMNGE 213 (981)
Q Consensus 190 ~Vyvvg~~g~--~~~~v~aLd~~tG~ 213 (981)
.+|+...... ....+..+|..++.
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC
Confidence 6887654310 01247777776554
No 240
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=87.47 E-value=33 Score=36.58 Aligned_cols=150 Identities=15% Similarity=0.110 Sum_probs=75.8
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc---Ccc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR---GSK 128 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~---~~~ 128 (981)
++..++.++.+|.|.-.|.++|+.+-+..-.. ..+..+...-++..++.++.++.++.||.. |......... ...
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~-~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ-SEVYSVAFSPDNRQILSAGAEREIKLWNIL-GECKFSSAEKENHSDW 164 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEEEEEECCC-SCEEEEEECSSTTEEEEEETTSCEEEEESS-SCEEEECCTTTSCSSC
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC-CcEEEEEECCCCCEEEEEcCCCEEEEEecc-CCceeeeecccCCCce
Confidence 45678899999999999999998776554322 223333222233444445566799999987 4433332211 000
Q ss_pred ccCCceeecccc----cccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 129 HSKPLLLVPTNL----KVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 129 ~s~~~~~v~~~~----~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
. ....+.|... ....+..++.. .||.+...| .+++............ ..+..+..+..+...+.+| .
T Consensus 165 v-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v--~~~~~s~~g~~l~sgs~dg----~ 236 (343)
T 2xzm_R 165 V-SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNV--NHLSISPNGKYIATGGKDK----K 236 (343)
T ss_dssp E-EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCE--EEEEECTTSSEEEEEETTC----E
T ss_pred e-eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccc--eEEEECCCCCEEEEEcCCC----e
Confidence 0 0000111000 00001233333 489999998 5666666554433222 2222122333333333333 4
Q ss_pred EEEEECCC
Q 002016 204 AYQINAMN 211 (981)
Q Consensus 204 v~aLd~~t 211 (981)
+...|+.+
T Consensus 237 v~iwd~~~ 244 (343)
T 2xzm_R 237 LLIWDILN 244 (343)
T ss_dssp EEEEESSC
T ss_pred EEEEECCC
Confidence 77778743
No 241
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=87.18 E-value=31 Score=35.98 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeee--ecCeEEEEEccCCEEEEEeCCCCc--EeEEEeccC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIA--LGKYVITLSSDGSTLRAWNLPDGQ--MVWESFLRG 126 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~--~~~~vV~Vs~~g~~V~A~da~tG~--llWe~~~~~ 126 (981)
+++.+++++.+|.|.-.|..++.......+... ..+..+... ..+..++.++.++.|+.||..+|+ .+-......
T Consensus 20 ~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~ 99 (297)
T 2pm7_B 20 YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHS 99 (297)
T ss_dssp TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCS
T ss_pred CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCC
Confidence 467899999999999999876543333444332 233333111 123455546667899999999885 222222222
Q ss_pred ccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCc
Q 002016 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGE 165 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~ 165 (981)
..+ ....+.|. ..+..++.. .||.+..+|..++.
T Consensus 100 ~~v-~~v~~~p~----~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 100 ASV-NSVQWAPH----EYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp SCE-EEEEECCG----GGCSEEEEEETTSEEEEEEBCSSS
T ss_pred Cce-eEEEeCcC----CCCcEEEEEECCCcEEEEEecCCC
Confidence 111 11111110 112344444 48888888887763
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.01 E-value=18 Score=38.51 Aligned_cols=145 Identities=8% Similarity=-0.031 Sum_probs=75.2
Q ss_pred EEEEEcCCCEEEEEECCCCcc-ceEEEcCC-----------------Ccceeeeeeeec-CeEEEEEccCCEEEEEeCCC
Q 002016 55 RVVVSTEENVIASLDLRHGEI-FWRHVLGI-----------------NDVVDGIDIALG-KYVITLSSDGSTLRAWNLPD 115 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~i-vWR~~l~~-----------------~~~i~~l~~~~~-~~vV~Vs~~g~~V~A~da~t 115 (981)
.+|+.+..+.|..+|+++|+. .|...-.. .....++ +... ++.++|+..++.++.+|..+
T Consensus 32 ~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi-~~~~~~g~l~v~d~~~~i~~~d~~~ 110 (322)
T 2fp8_A 32 GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDI-SYNLQNNQLYIVDCYYHLSVVGSEG 110 (322)
T ss_dssp SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEE-EEETTTTEEEEEETTTEEEEECTTC
T ss_pred EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceE-EEcCCCCcEEEEECCCCEEEEeCCC
Confidence 499999999999999988754 24321100 0012233 1232 45566664445699999887
Q ss_pred CcEeEEEec-cCccccCCceeecccccccC-CcEEEEEe-------------------CCEEEEEECCCCcEeEEEe-cc
Q 002016 116 GQMVWESFL-RGSKHSKPLLLVPTNLKVDK-DSLILVSS-------------------KGCLHAVSSIDGEILWTRD-FA 173 (981)
Q Consensus 116 G~llWe~~~-~~~~~s~~~~~v~~~~~~~~-~~~V~V~~-------------------~g~l~aLd~~tG~~~W~~~-~~ 173 (981)
|+...-... .+..... +.....+. ++.+++.. +|.|+++|..+|+..-... ..
T Consensus 111 g~~~~~~~~~~~~~~~~-----p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~ 185 (322)
T 2fp8_A 111 GHATQLATSVDGVPFKW-----LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH 185 (322)
T ss_dssp EECEEEESEETTEECSC-----EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES
T ss_pred CEEEEecccCCCCcccc-----cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc
Confidence 764322111 1111100 11111233 45677742 2789999998887542211 11
Q ss_pred CcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCC
Q 002016 174 AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (981)
Q Consensus 174 ~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG 212 (981)
. +..+.....++.+|+.....+ ++..+|..++
T Consensus 186 ~----p~gia~~~dg~~lyv~d~~~~---~I~~~~~~~~ 217 (322)
T 2fp8_A 186 V----PGGAEVSADSSFVLVAEFLSH---QIVKYWLEGP 217 (322)
T ss_dssp C----CCEEEECTTSSEEEEEEGGGT---EEEEEESSST
T ss_pred c----CcceEECCCCCEEEEEeCCCC---eEEEEECCCC
Confidence 1 222221223345787544332 5888887653
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.71 E-value=11 Score=45.00 Aligned_cols=75 Identities=7% Similarity=0.046 Sum_probs=54.2
Q ss_pred CCCEEEEEcCC-CEEEEEECCCCccceEEEcCCCcceeeeeee--ecCeEEEEEc------------------cCCEEEE
Q 002016 52 GRKRVVVSTEE-NVIASLDLRHGEIFWRHVLGINDVVDGIDIA--LGKYVITLSS------------------DGSTLRA 110 (981)
Q Consensus 52 ~~~~VyvaT~~-g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~--~~~~vV~Vs~------------------~g~~V~A 110 (981)
+++.+|+.... +.|+.+|+++.+...-..++......++++. -+.+.|++++ +.+.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 45669997654 5899999999998887677654334455331 2344556663 2458999
Q ss_pred EeCCCCcEeEEEeccC
Q 002016 111 WNLPDGQMVWESFLRG 126 (981)
Q Consensus 111 ~da~tG~llWe~~~~~ 126 (981)
+|.++.++.|+..+.+
T Consensus 180 ID~~t~~v~~qI~Vgg 195 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG 195 (595)
T ss_dssp EETTTTEEEEEEEESS
T ss_pred EECCCCeEEEEEEeCC
Confidence 9999999999999854
No 244
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.66 E-value=16 Score=39.22 Aligned_cols=67 Identities=7% Similarity=0.103 Sum_probs=42.9
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcE
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM 118 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~l 118 (981)
+++.+++++.++.+.-.|..+++......+... ..+..+...-++..++.++.++.|+.||..++..
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 466789999999998888888765444555432 2333332222344555466677999999988753
No 245
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.56 E-value=5.3 Score=43.09 Aligned_cols=67 Identities=9% Similarity=0.001 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCCc-cceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcE
Q 002016 52 GRKRVVVSTEENVIASLDLRHGE-IFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM 118 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~-ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~l 118 (981)
+++.+++++.+|.|...|.++|+ ..=...+... ..+..+....++..++.++.++.++.||..+|+.
T Consensus 66 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 66 KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 35679999999999999999987 1112222221 2233332122344555566667999999999875
No 246
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.31 E-value=40 Score=36.30 Aligned_cols=194 Identities=12% Similarity=0.076 Sum_probs=97.3
Q ss_pred CCCEEEEEcCC-----------CEEEEEECCCCccceEEEcCCC-cce-eeeeeeecCeEEEEEccC-------------
Q 002016 52 GRKRVVVSTEE-----------NVIASLDLRHGEIFWRHVLGIN-DVV-DGIDIALGKYVITLSSDG------------- 105 (981)
Q Consensus 52 ~~~~VyvaT~~-----------g~L~ALd~~tG~ivWR~~l~~~-~~i-~~l~~~~~~~vV~Vs~~g------------- 105 (981)
.+++||+.... +.+..+|+.+.+ |+..-... ..- ....+..++.++++||.+
T Consensus 64 ~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 141 (357)
T 2uvk_A 64 IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS--WVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNE 141 (357)
T ss_dssp ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE--EEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc--EEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhh
Confidence 36788887554 468999998875 99764332 111 111123567777777742
Q ss_pred --------------------------CEEEEEeCCCCcEeEEEeccCccc-cCCceeecccccccCCcEEEEEe------
Q 002016 106 --------------------------STLRAWNLPDGQMVWESFLRGSKH-SKPLLLVPTNLKVDKDSLILVSS------ 152 (981)
Q Consensus 106 --------------------------~~V~A~da~tG~llWe~~~~~~~~-s~~~~~v~~~~~~~~~~~V~V~~------ 152 (981)
..+..+|..+. .|+.-...+.. ...... ...++.+++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~~~~~~~~------~~~~~~iyv~GG~~~~~ 213 (357)
T 2uvk_A 142 AGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESPWYGTAGAAV------VNKGDKTWLINGEAKPG 213 (357)
T ss_dssp HTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECSSCCCBSCEE------EEETTEEEEECCEEETT
T ss_pred cCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCCCCCcccccE------EEECCEEEEEeeecCCC
Confidence 57999999876 68865322210 000111 11245566652
Q ss_pred --CCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCeEEEEEecCC-------------------ceeEEEEEECC
Q 002016 153 --KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYVVGYAGS-------------------SQFHAYQINAM 210 (981)
Q Consensus 153 --~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyvvg~~g~-------------------~~~~v~aLd~~ 210 (981)
...+..+|.......|+.-.+.+.- ......-...++.+|++|-... ....+..+|+.
T Consensus 214 ~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~ 293 (357)
T 2uvk_A 214 LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH 293 (357)
T ss_dssp EECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC
T ss_pred cccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC
Confidence 2357778764445578875432110 0011101246788998764210 00246788988
Q ss_pred CCceeeeeeeeccCCccC-ceEEEcCcEEEEEECC-C----CeEEEEEeecCe
Q 002016 211 NGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT-R----SILVTVSFKNRK 257 (981)
Q Consensus 211 tG~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~~-~----g~L~v~~L~sg~ 257 (981)
++ .|+..-..|..... .++..++.+++..=.+ + ..+.++++++++
T Consensus 294 ~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 294 NG--KWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp -----CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred CC--ceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 65 58775455554443 2333344444432211 1 134555555554
No 247
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=86.20 E-value=46 Score=36.96 Aligned_cols=153 Identities=11% Similarity=0.086 Sum_probs=76.7
Q ss_pred CCEEEEEcC---CCEEEEEEC-CCCccceEEEcCCCc-ceeeeeeeecCe-EEEEEccCCEEEEEeCCCCcEeEEEeccC
Q 002016 53 RKRVVVSTE---ENVIASLDL-RHGEIFWRHVLGIND-VVDGIDIALGKY-VITLSSDGSTLRAWNLPDGQMVWESFLRG 126 (981)
Q Consensus 53 ~~~VyvaT~---~g~L~ALd~-~tG~ivWR~~l~~~~-~i~~l~~~~~~~-vV~Vs~~g~~V~A~da~tG~llWe~~~~~ 126 (981)
+++++..+. ++.|..++. .+|+.+=.+.+..+. .+-.+.++.|++ .++-++.+++|+-||.++|+.+.......
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 344444433 667777776 456655444443331 121222223333 44435667899999999999998886432
Q ss_pred ccccCCc---eeecccccccCCcEEE------------E-E-eCCEEEEEECCCCcEeEEEec--cCcceeeeEEEEeec
Q 002016 127 SKHSKPL---LLVPTNLKVDKDSLIL------------V-S-SKGCLHAVSSIDGEILWTRDF--AAESVEVQQVIQLDE 187 (981)
Q Consensus 127 ~~~s~~~---~~v~~~~~~~~~~~V~------------V-~-~~g~l~aLd~~tG~~~W~~~~--~~~~~~~~~vv~s~~ 187 (981)
... ... .+-| ++..+ + . .++.+...|..+|+.+-.... +.+... . ......
T Consensus 224 ~~v-~~v~~vafSp-------dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~-~-~lsg~~ 293 (356)
T 2w18_A 224 SYQ-ASVCHKAYSE-------MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG-R-FLEGDV 293 (356)
T ss_dssp ----CCCEEEEEEE-------TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC-C-EEEEEE
T ss_pred cce-eeeEEEEECC-------CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc-e-eEcccc
Confidence 111 011 1111 22222 1 1 267888889999987644321 111100 0 110011
Q ss_pred CCeEEEEEecCCceeEEEEEECCCCceeeee
Q 002016 188 SDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 188 ~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
.+.+.+.+..++ .+..-|+.+|+.+-+.
T Consensus 294 sg~~lASgS~Dg---TIkIWDl~tGk~l~tL 321 (356)
T 2w18_A 294 KDHCAAAILTSG---TIAIWDLLLGQCTALL 321 (356)
T ss_dssp ETTEEEEEETTS---CEEEEETTTCSEEEEE
T ss_pred CCCEEEEEcCCC---cEEEEECCCCcEEEEe
Confidence 123333333222 4777899999988665
No 248
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.10 E-value=12 Score=40.19 Aligned_cols=156 Identities=12% Similarity=0.017 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeee-------------------eecCeEEEEE----ccCCEE
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDI-------------------ALGKYVITLS----SDGSTL 108 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~-------------------~~~~~vV~Vs----~~g~~V 108 (981)
+++.|++++.++.|+.+|+.+|+..--..........+-.. +.++.+++.. .....+
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 46678888888899999999987543333222100000000 0111111111 234579
Q ss_pred EEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEe-C------CEEEEEECCCCcEeEEEeccCcceeeeE
Q 002016 109 RAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-K------GCLHAVSSIDGEILWTRDFAAESVEVQQ 181 (981)
Q Consensus 109 ~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-~------g~l~aLd~~tG~~~W~~~~~~~~~~~~~ 181 (981)
+.||..+|+...-....... ....+.| +.++.++... + ..|+.+|..+|+..--.. ..+...+..
T Consensus 171 ~~~d~~~g~~~~~~~~~~~~--~~~~~sp-----~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~ 242 (396)
T 3c5m_A 171 IKVDIETGELEVIHQDTAWL--GHPIYRP-----FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTH 242 (396)
T ss_dssp EEEETTTCCEEEEEEESSCE--EEEEEET-----TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEE
T ss_pred EEEECCCCcEEeeccCCccc--ccceECC-----CCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccc
Confidence 99999999876544322111 0111111 0122233322 1 467777776654321111 111111222
Q ss_pred EEEeecCCeEEEEEecC-CceeEEEEEECCCCcee
Q 002016 182 VIQLDESDQIYVVGYAG-SSQFHAYQINAMNGELL 215 (981)
Q Consensus 182 vv~s~~~~~Vyvvg~~g-~~~~~v~aLd~~tG~~l 215 (981)
+..+.++..+++++..+ .....++.+|+.+|+..
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE 277 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeE
Confidence 22233455566655543 22235888999999764
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.09 E-value=33 Score=35.20 Aligned_cols=149 Identities=9% Similarity=-0.009 Sum_probs=78.0
Q ss_pred CCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEcc---CCEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~---g~~V~A~da~tG~llWe~~~~~~ 127 (981)
++.+|+++. .+.|..+|+. |+.. +.....+ ....++.....++.++++.. .+.|+.++. +|+..=... ..
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~-g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~-dg~~~~~~~-~~- 164 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMD-GTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM-DGTNRRILA-QD- 164 (267)
T ss_dssp TTEEEEEETTTTEEEEEETT-SCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET-TSCCCEEEE-CT-
T ss_pred CCeEEEEECCCCEEEEEEcC-CCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec-CCCCcEEEE-EC-
Confidence 567888865 4688888874 4322 2222211 11123311122455555542 357888876 454321111 11
Q ss_pred cccCCceeeccccccc-CCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 128 KHSKPLLLVPTNLKVD-KDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~-~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
....+..+. .+ .++.+|+. ..+++.++|...+...-.... . ..|..+. ..++.+|+....++ ++
T Consensus 165 ~~~~P~gia-----~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~--~-~~P~gi~--~d~~~lyva~~~~~---~v 231 (267)
T 1npe_A 165 NLGLPNGLT-----FDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG--L-QYPFAVT--SYGKNLYYTDWKTN---SV 231 (267)
T ss_dssp TCSCEEEEE-----EETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC--C-CSEEEEE--EETTEEEEEETTTT---EE
T ss_pred CCCCCcEEE-----EcCCCCEEEEEECCCCEEEEEecCCCceEEEecC--C-CCceEEE--EeCCEEEEEECCCC---eE
Confidence 110111111 12 24577776 368999999876544322221 1 1244442 45789998665443 58
Q ss_pred EEEECCCCceeeeee
Q 002016 205 YQINAMNGELLNHET 219 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~ 219 (981)
..+|+.+|+.+-...
T Consensus 232 ~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 232 IAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEETTTTEEEEEEC
T ss_pred EEEeCCCCCceEEEc
Confidence 999999999876553
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=85.44 E-value=35 Score=34.96 Aligned_cols=192 Identities=13% Similarity=0.032 Sum_probs=97.1
Q ss_pred CCCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
.++.||+++. .+.|..+|+.++.. +..+... ....++.....++.++++ ...+.|..+|.. |+.. +.-...+
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~-g~~~-~~~~~~~- 120 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD-GTQR-RVLFDTG- 120 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSC-EEEECSS-
T ss_pred CCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC-CCCE-EEEEECC-
Confidence 3678998875 57999999866543 2222221 112234111123455554 345689999875 4321 1111111
Q ss_pred ccCCceeecccccccC-CcEEEEEe----CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 129 HSKPLLLVPTNLKVDK-DSLILVSS----KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~~-~~~V~V~~----~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
...+..+. .+. ++.+++.. .+++++++.. |...=..... +...|..+.....++.+|+.....+ +
T Consensus 121 ~~~P~~i~-----vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~---~ 190 (267)
T 1npe_A 121 LVNPRGIV-----TDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQD-NLGLPNGLTFDAFSSQLCWVDAGTH---R 190 (267)
T ss_dssp CSSEEEEE-----EETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECT-TCSCEEEEEEETTTTEEEEEETTTT---E
T ss_pred CCCccEEE-----EeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEEC-CCCCCcEEEEcCCCCEEEEEECCCC---E
Confidence 10111111 122 45677753 3688888754 4322111111 1112444432234678988654433 5
Q ss_pred EEEEECCCCceeeeee-eeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCeeeEEEEe
Q 002016 204 AYQINAMNGELLNHET-AAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRKIAFQETH 264 (981)
Q Consensus 204 v~aLd~~tG~~lw~~~-v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~~~~~~~~ 264 (981)
+..+|+.++....-.. ...|.+ +.+.++.+++.|..++.+.+++..+|+. .+.++
T Consensus 191 I~~~~~~g~~~~~~~~~~~~P~g-----i~~d~~~lyva~~~~~~v~~~d~~~g~~-~~~i~ 246 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGLQYPFA-----VTSYGKNLYYTDWKTNSVIAMDLAISKE-MDTFH 246 (267)
T ss_dssp EEEEETTEEEEEEEEECCCSEEE-----EEEETTEEEEEETTTTEEEEEETTTTEE-EEEEC
T ss_pred EEEEecCCCceEEEecCCCCceE-----EEEeCCEEEEEECCCCeEEEEeCCCCCc-eEEEc
Confidence 8889987544321111 111211 1234677788888888999999888873 44444
No 251
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=85.32 E-value=65 Score=38.85 Aligned_cols=194 Identities=9% Similarity=0.026 Sum_probs=103.1
Q ss_pred CCCEEEEEcCC-----CEEEEEECCCCccceEEEc-C-----CCc-ceeeeeeee--cCeEEEEEccC------CEEEEE
Q 002016 52 GRKRVVVSTEE-----NVIASLDLRHGEIFWRHVL-G-----IND-VVDGIDIAL--GKYVITLSSDG------STLRAW 111 (981)
Q Consensus 52 ~~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l-~-----~~~-~i~~l~~~~--~~~vV~Vs~~g------~~V~A~ 111 (981)
.++.||+..+. +.+..+|+.+++ |+..- + .+. ......+.. ++.++++||.+ +.+..+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 46678877653 568999999885 99765 3 111 111111345 66676767632 357889
Q ss_pred eCCCCcEeEEEeccCccccCCceeeccccccc-CCcEEEEEe----CCEEEEEECCCCcEeEEEeccCc-----ceeeeE
Q 002016 112 NLPDGQMVWESFLRGSKHSKPLLLVPTNLKVD-KDSLILVSS----KGCLHAVSSIDGEILWTRDFAAE-----SVEVQQ 181 (981)
Q Consensus 112 da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~-~~~~V~V~~----~g~l~aLd~~tG~~~W~~~~~~~-----~~~~~~ 181 (981)
|..+. .|+.-..-+. +.. .+.... .++.+++.+ ++.+..+|..++ .|+.-.+.+ ......
T Consensus 474 d~~t~--~W~~~~~~p~-----~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a 543 (695)
T 2zwa_A 474 DMKTR--EWSMIKSLSH-----TRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEE--IFKDVTPKDEFFQNSLVSAG 543 (695)
T ss_dssp ETTTT--EEEECCCCSB-----CCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTT--EEEECCCSSGGGGSCCBSCE
T ss_pred eCCCC--cEEECCCCCC-----Ccc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCC--ceEEccCCCCCCCcccceeE
Confidence 88776 5876532211 000 011111 245567653 126999999887 488755421 111111
Q ss_pred EEEeecCCeEEEEEecC----CceeEEEEEECCCCc----eeeeeeeecc-CCccC-ceEEEc-CcEEEEEEC-------
Q 002016 182 VIQLDESDQIYVVGYAG----SSQFHAYQINAMNGE----LLNHETAAFS-GGFVG-DVALVS-SDTLVTLDT------- 243 (981)
Q Consensus 182 vv~s~~~~~Vyvvg~~g----~~~~~v~aLd~~tG~----~lw~~~v~~p-~~~~~-~~~~vg-~~~lv~~d~------- 243 (981)
++.....+.+|+.|-.. ...-.+..+|+.+.+ ..|+.....| ....+ .+.+++ +.++++.-.
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~ 623 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFD 623 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCC
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCC
Confidence 21111227899887542 112358889998887 3476643322 23333 334445 334333210
Q ss_pred CCCeEEEEEeecCe
Q 002016 244 TRSILVTVSFKNRK 257 (981)
Q Consensus 244 ~~g~L~v~~L~sg~ 257 (981)
....+.+.|+.+++
T Consensus 624 ~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 624 RTNSIISLDPLSET 637 (695)
T ss_dssp TTTSEEEEETTTTE
T ss_pred CCCeEEEEECCCCe
Confidence 13457778877776
No 252
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=85.01 E-value=36 Score=40.20 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=68.2
Q ss_pred CeEEEEEccCCEEEEEeCCCCcEeEEEeccCc---cccCCceee--------------------------cccccc-cCC
Q 002016 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLRGS---KHSKPLLLV--------------------------PTNLKV-DKD 145 (981)
Q Consensus 96 ~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~---~~s~~~~~v--------------------------~~~~~~-~~~ 145 (981)
++-+++|+....|...|. ||+++|...-... .++ .-.+. .++.+. ..+
T Consensus 366 dd~~liSsR~~~I~~Id~-tG~V~W~LGg~~~w~~d~~-~~~l~Pvd~~G~~~~~~~~~~~~~~~F~~~~gQH~a~~~~~ 443 (571)
T 3elq_A 366 DDSIILSSRHQGVVKIGR-DKQVKWILAPSKGWEKPLA-SKLLKPVDANGKPITCNENGLCENSDFDFTYTQHTAWISSK 443 (571)
T ss_dssp TTEEEEEETTTEEEEEET-TSCEEEEESCSTTCCTTGG-GGBCEEBCTTSCBCCBCTTSCBSSSSCCCCSSCEEEEECTT
T ss_pred CCEEEEECCccEEEEEcC-CCcEEEEECCCCCCchhhh-hhccccccccCcccccccccccccCCCccccCCcCeEEcCC
Confidence 446666765448999997 9999999865432 110 00000 111111 123
Q ss_pred cEEEEEeC------------------CEEEEEECCCC--cEeEEEeccCc--cee----eeEEEEeecCCeEEEEEec--
Q 002016 146 SLILVSSK------------------GCLHAVSSIDG--EILWTRDFAAE--SVE----VQQVIQLDESDQIYVVGYA-- 197 (981)
Q Consensus 146 ~~V~V~~~------------------g~l~aLd~~tG--~~~W~~~~~~~--~~~----~~~vv~s~~~~~Vyvvg~~-- 197 (981)
+.+.++.+ +..+.+|.++. +++|++..+.+ ..+ -.|.. ..++.++.-|..
T Consensus 444 g~i~vFDNg~~~~~~~p~~~~~~~SR~l~y~ID~~~~Tv~~vw~y~~~~g~~~yS~~~gs~Q~L--~nGN~li~~g~~~~ 521 (571)
T 3elq_A 444 GTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSIIEYQ--ADRNTMFGFGGSIH 521 (571)
T ss_dssp SCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEEECGGGGGGGCCSSCCEEEEE--TTTTEEEEEEEEET
T ss_pred CeEEEEeCCCCCCCCcccCCCCCCceEEEEEEcCCCCEEEEEEEecCCCCCCcccccccccEEC--CCCCEEEEeccccc
Confidence 44666531 23466999977 79999964311 111 22222 344455443321
Q ss_pred ---CCc--eeEEEEEECCCCceeeeeeee
Q 002016 198 ---GSS--QFHAYQINAMNGELLNHETAA 221 (981)
Q Consensus 198 ---g~~--~~~v~aLd~~tG~~lw~~~v~ 221 (981)
.+. ..++..++..+++++|+..+.
T Consensus 522 ~~~~g~~~~~~i~E~~~~~~evv~e~~~~ 550 (571)
T 3elq_A 522 LFDVGQPTVGKLNEIDYKTKEVKVEIDVL 550 (571)
T ss_dssp TTSTTSEEEEEEEEEETTTCCEEEEEEEE
T ss_pred ccccCCCCceeEEEECCCCCEEEEEEEec
Confidence 011 467899999888999998764
No 253
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=84.54 E-value=46 Score=35.74 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=46.8
Q ss_pred CCEEEEEcC------CCEEEEEECCCCccceEEEcCCCc-----ceeeeeeeecCeEEEEEc----cCCEEEEEeCCCCc
Q 002016 53 RKRVVVSTE------ENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSS----DGSTLRAWNLPDGQ 117 (981)
Q Consensus 53 ~~~VyvaT~------~g~L~ALd~~tG~ivWR~~l~~~~-----~i~~l~~~~~~~vV~Vs~----~g~~V~A~da~tG~ 117 (981)
++++|+++. .+.|..+|+++|+++-+..++... ....+.....++.++++. ..+.|+.||..+|+
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 578999874 478999999999987777664321 112331221345666653 34689999999997
Q ss_pred EeEEEe
Q 002016 118 MVWESF 123 (981)
Q Consensus 118 llWe~~ 123 (981)
. |+..
T Consensus 157 ~-~r~~ 161 (343)
T 2qe8_A 157 A-ARVL 161 (343)
T ss_dssp E-EEEC
T ss_pred E-EEEe
Confidence 4 6653
No 254
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=84.49 E-value=9.4 Score=45.15 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=56.1
Q ss_pred ccccccccEeEEEecc-----------CceeeeeeeecccCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcce---e
Q 002016 23 LYEDQVGLMDWHQQYI-----------GKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV---D 88 (981)
Q Consensus 23 lyedqvG~~dW~~~~v-----------G~~~~~~f~~~~~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i---~ 88 (981)
..=|..|.+.|..... |.+....|.+ ..++.+..+.. ..++-+|. +|+++|+..++..... +
T Consensus 178 ~i~D~~G~lrW~~~~~~~~~~~~~~~~~~g~l~~~~g--~~nG~l~~g~G-~~i~elD~-~Gkvv~~~~lp~g~~~~HHD 253 (571)
T 3elq_A 178 FIVDTEGEYRWWLDQDTFYDGRDRDINKRGYLMGIRE--TPRGTFTAVQG-QHWYEFDM-MGQVLEDHKLPRGFADATHE 253 (571)
T ss_dssp EEECTTSCEEEECCGGGTCCSSSCCGGGCSCCEEEEE--CTTSCEEEEEB-TEEEEECT-TCCEEEEEECCTTEECBCSC
T ss_pred EEEcCCCcEEEEeCcccccccceeeccCCCeEEEEEe--cCCCCEEEecC-cEEEEECC-CCcEEEEEECCCCccccccc
Confidence 3346689999997652 1111112322 12444555544 46999996 9999999998753100 0
Q ss_pred eeeeeecCeEEEEEc-------------cCCEEEEEeCCCCcEeEEEecc
Q 002016 89 GIDIALGKYVITLSS-------------DGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 89 ~l~~~~~~~vV~Vs~-------------~g~~V~A~da~tG~llWe~~~~ 125 (981)
......|.-++.+.. -+..+.-.| .||+++|+++..
T Consensus 254 ~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGeVv~eW~~~ 302 (571)
T 3elq_A 254 SIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGRVVDVWDLT 302 (571)
T ss_dssp EEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSCEEEEEEHH
T ss_pred eEEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCCEEEEEEhH
Confidence 111112222222211 134788999 899999999863
No 255
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=83.56 E-value=69 Score=36.79 Aligned_cols=167 Identities=9% Similarity=-0.011 Sum_probs=89.0
Q ss_pred CCEEEEEcCC--------CEEEEEECCC-----CccceEEEcCCCc-cee-----------eeeee--ecCeEEEEEc-c
Q 002016 53 RKRVVVSTEE--------NVIASLDLRH-----GEIFWRHVLGIND-VVD-----------GIDIA--LGKYVITLSS-D 104 (981)
Q Consensus 53 ~~~VyvaT~~--------g~L~ALd~~t-----G~ivWR~~l~~~~-~i~-----------~l~~~--~~~~vV~Vs~-~ 104 (981)
.+.+||.+-. -.|+.+|.+. |+++-|..++..+ ... +.... .....+++++ .
T Consensus 25 e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~ 104 (462)
T 2ece_A 25 EDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLR 104 (462)
T ss_dssp CSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTT
T ss_pred ceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCC
Confidence 4557766522 3699999988 9999999997642 111 11001 3345666655 4
Q ss_pred CCEEEEEeCCCC--cEeEEEeccCccccCCcee-ecccccccCCcEEEEE--eC------CEEEEEECCCCcEeEEEecc
Q 002016 105 GSTLRAWNLPDG--QMVWESFLRGSKHSKPLLL-VPTNLKVDKDSLILVS--SK------GCLHAVSSIDGEILWTRDFA 173 (981)
Q Consensus 105 g~~V~A~da~tG--~llWe~~~~~~~~s~~~~~-v~~~~~~~~~~~V~V~--~~------g~l~aLd~~tG~~~W~~~~~ 173 (981)
.++|+.+|..+- ++.=...+..+.+...... .|.+.....++ ++|. .+ |.+..+|.+|++++=++..+
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~ 183 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID 183 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC
Confidence 678999998644 3222222210000000000 00000011244 6663 34 78999999999987665543
Q ss_pred Ccc-eeeeEEEEeecCCeEEEEEecC----------------CceeEEEEEECCCCceeeeeeee
Q 002016 174 AES-VEVQQVIQLDESDQIYVVGYAG----------------SSQFHAYQINAMNGELLNHETAA 221 (981)
Q Consensus 174 ~~~-~~~~~vv~s~~~~~Vyvvg~~g----------------~~~~~v~aLd~~tG~~lw~~~v~ 221 (981)
... .-.+.+......+.+| .+-+| .+.-+|..+|..+|+.+.+..++
T Consensus 184 ~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 184 RGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp CTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred CCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 221 1123343233444444 44322 01226889999999877766554
No 256
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=82.70 E-value=41 Score=40.53 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=35.2
Q ss_pred EEEEEECCCCcEe-EEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeee
Q 002016 155 CLHAVSSIDGEIL-WTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 155 ~l~aLd~~tG~~~-W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
.++.+|..+|... |+.-...... ....+ ...++.+|+.+..+..+.+++.+|+.+|...|+.
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 357 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKA-QWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDT 357 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSS-CEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCc-eEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEE
Confidence 7888888887433 3322211111 11112 2467788887765544568999999886423444
No 257
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.58 E-value=43 Score=33.63 Aligned_cols=141 Identities=11% Similarity=0.005 Sum_probs=72.7
Q ss_pred CCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCC-CcEeEEEeccCccccCCceeeccc
Q 002016 61 EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPD-GQMVWESFLRGSKHSKPLLLVPTN 139 (981)
Q Consensus 61 ~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~t-G~llWe~~~~~~~~s~~~~~v~~~ 139 (981)
.++.|..+|..+|++........ .+..+...-++..++.++ ++.++.||..+ |+..-..............+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s--- 93 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS--- 93 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC---
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC---
Confidence 46789999999998775444322 233332223344444454 46999999999 876532222110100112222
Q ss_pred ccccCCcEEEEEe-----CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCce
Q 002016 140 LKVDKDSLILVSS-----KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 140 ~~~~~~~~V~V~~-----~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
..+..+++.. ...|+.++..+|+..-- ..... ...+..+.++..+++.+..++ ..+++.+|..+|+.
T Consensus 94 ---pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~spdg~~l~~~~~~~~-~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 94 ---PDGALYAISDKVEFGKSAIYLLPSTGGTPRLM-TKNLP---SYWHGWSPDGKSFTYCGIRDQ-VFDIYSMDIDSGVE 165 (297)
T ss_dssp ---TTSSEEEEEECTTTSSCEEEEEETTCCCCEEC-CSSSS---EEEEEECTTSSEEEEEEEETT-EEEEEEEETTTCCE
T ss_pred ---CCCCEEEEEEeCCCCcceEEEEECCCCceEEe-ecCCC---ccceEECCCCCEEEEEECCCC-ceEEEEEECCCCcc
Confidence 1233444433 46888888877764221 11111 112222334555554443332 45788888888765
Q ss_pred e
Q 002016 215 L 215 (981)
Q Consensus 215 l 215 (981)
.
T Consensus 166 ~ 166 (297)
T 2ojh_A 166 T 166 (297)
T ss_dssp E
T ss_pred e
Confidence 3
No 258
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=81.91 E-value=89 Score=36.85 Aligned_cols=149 Identities=11% Similarity=0.121 Sum_probs=78.4
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCC-----CcEeEEEeccCc
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPD-----GQMVWESFLRGS 127 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~t-----G~llWe~~~~~~ 127 (981)
+.++++. ++.|..+|..+|+..-. ......+..+... .++.+++ +. ++.|+.||..+ |+..--......
T Consensus 93 ~~~~~~~-~~~i~~~d~~~~~~~~l--~~~~~~~~~~~~SpdG~~la~-~~-~~~i~v~~~~~~~~~~g~~~~~~~~~~~ 167 (706)
T 2z3z_A 93 GLVVLFT-QGGLVGFDMLARKVTYL--FDTNEETASLDFSPVGDRVAY-VR-NHNLYIARGGKLGEGMSRAIAVTIDGTE 167 (706)
T ss_dssp TEEEEEE-TTEEEEEETTTTEEEEE--ECCTTCCTTCEECTTSSEEEE-EE-TTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred CeEEEEE-CCEEEEEECCCCceEEc--cCCcccccCCcCCCCCCEEEE-EE-CCeEEEEecCcccccCCCcEEeccCCCC
Confidence 5555554 48999999999976322 2222112222112 3445555 43 46999999998 876532222111
Q ss_pred cc-------------cCCceeecccccccCCcEEEEEe----------------------------------CCEEEEEE
Q 002016 128 KH-------------SKPLLLVPTNLKVDKDSLILVSS----------------------------------KGCLHAVS 160 (981)
Q Consensus 128 ~~-------------s~~~~~v~~~~~~~~~~~V~V~~----------------------------------~g~l~aLd 160 (981)
.. .....+-| + +..+++.. +..|+.+|
T Consensus 168 ~~~~g~~~~~ee~~~~~~~~~Sp-----D-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEKGTFWSP-----K-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp TEEESSCCGGGCTTCCCSEEECT-----T-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred CeEcccchhhhhcCCCceEEECC-----C-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 00 01111111 1 33343332 25788899
Q ss_pred CCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecC-CceeEEEEEECCCCc
Q 002016 161 SIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG-SSQFHAYQINAMNGE 213 (981)
Q Consensus 161 ~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g-~~~~~v~aLd~~tG~ 213 (981)
.++|+..+..........+..+.-+.++..+++.+..+ .....+..+|+.+|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 242 LATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp TTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred CCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence 98888765543211111123333334555677655543 234578999999994
No 259
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=81.22 E-value=71 Score=38.17 Aligned_cols=62 Identities=8% Similarity=0.040 Sum_probs=37.1
Q ss_pred CEEEEEECCCCcEeEEE-eccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCce-eeee
Q 002016 154 GCLHAVSSIDGEILWTR-DFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL-LNHE 218 (981)
Q Consensus 154 g~l~aLd~~tG~~~W~~-~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~-lw~~ 218 (981)
..++.+|+.+|+..|.. ....... . ..+ ...++.+|+.+..++.+.+|+.+|+.+|+. -|+.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-~-~~~-~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~ 322 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-V-SLV-DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD 322 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-E-EEE-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-E-EEE-eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE
Confidence 47888888777543332 2211111 1 111 346788888776654456899999998875 3654
No 260
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=81.07 E-value=73 Score=37.64 Aligned_cols=64 Identities=13% Similarity=0.102 Sum_probs=39.1
Q ss_pred CCCEEEEEcCC---------CEEEEEECCCCccceEEEcCCCc----ceeeeee-eecCeEEEEEccCCEEEEEeCCCCc
Q 002016 52 GRKRVVVSTEE---------NVIASLDLRHGEIFWRHVLGIND----VVDGIDI-ALGKYVITLSSDGSTLRAWNLPDGQ 117 (981)
Q Consensus 52 ~~~~VyvaT~~---------g~L~ALd~~tG~ivWR~~l~~~~----~i~~l~~-~~~~~vV~Vs~~g~~V~A~da~tG~ 117 (981)
+++.|++++.+ +.+.-.|.++|+. +.+.... .+..... +.|+.+++++. +.|+.||..+|+
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~ 145 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP---QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQ 145 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC---EECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSC
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCce---EeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCc
Confidence 45667776653 7888999999986 2332221 0111111 24555666554 589999999997
Q ss_pred EeE
Q 002016 118 MVW 120 (981)
Q Consensus 118 llW 120 (981)
..-
T Consensus 146 ~~~ 148 (723)
T 1xfd_A 146 AIR 148 (723)
T ss_dssp CEE
T ss_pred eEE
Confidence 653
No 261
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=80.70 E-value=46 Score=39.01 Aligned_cols=151 Identities=20% Similarity=0.197 Sum_probs=72.7
Q ss_pred cCCCEEEEEcCC----------CEEEEEECCC------CccceEEEc-CCCcceeeeeee-ecCeEEEEEccC-------
Q 002016 51 TGRKRVVVSTEE----------NVIASLDLRH------GEIFWRHVL-GINDVVDGIDIA-LGKYVITLSSDG------- 105 (981)
Q Consensus 51 ~~~~~VyvaT~~----------g~L~ALd~~t------G~ivWR~~l-~~~~~i~~l~~~-~~~~vV~Vs~~g------- 105 (981)
.+++.|++++.+ +.|+.+|..+ |+. ++.. ............ .|..+++.+.++
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV--RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS--EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce--eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 356678777765 5899999988 554 3333 222212222112 344455555332
Q ss_pred CEEEEEeCC-CCcE--eEEEecc-CccccCCceeecccccccCCcEEEEEe--CC--EEEEEECCCCcEeEEEeccCcc-
Q 002016 106 STLRAWNLP-DGQM--VWESFLR-GSKHSKPLLLVPTNLKVDKDSLILVSS--KG--CLHAVSSIDGEILWTRDFAAES- 176 (981)
Q Consensus 106 ~~V~A~da~-tG~l--lWe~~~~-~~~~s~~~~~v~~~~~~~~~~~V~V~~--~g--~l~aLd~~tG~~~W~~~~~~~~- 176 (981)
..|+.||.. +|+. .-+.... .... ..+.+. .|+.+++.+ +| .|+.+|.++|+..--.......
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~-~~~~~s-------pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 288 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAI-AQAEWA-------PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFA 288 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCE-EEEEEC-------TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSS
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceE-cceEEC-------CCCeEEEEECCCCCeEEEEEECCCCceeeccccccccc
Confidence 479999998 6832 1111111 1111 011111 123344432 45 7888888777643111111000
Q ss_pred ---ee--eeEEEEeecCCeEEEEEecCCceeEEEEEECCCCce
Q 002016 177 ---VE--VQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 177 ---~~--~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
.. ...+. ...++.+++.+..| ..++..+|..+|+.
T Consensus 289 ~p~w~~~~~~~~-~~~~~~~~~~~~~~--~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 289 GPLWTPGMRWFA-PLANGLIAVVHGKG--AAVLGILDPESGEL 328 (662)
T ss_dssp CCCCSTTCCSEE-ECTTSCEEEEEBSS--SCEEEEEETTTTEE
T ss_pred CccccccCceEe-EeCCCEEEEEEEcC--ccEEEEEECCCCcE
Confidence 00 01111 12345565555443 45788889888873
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.55 E-value=1.2e+02 Score=37.37 Aligned_cols=190 Identities=15% Similarity=0.068 Sum_probs=88.3
Q ss_pred CCEEEEEcC-CCEEEEEECCCCcc--ceEEEcCCC-cceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEI--FWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~i--vWR~~l~~~-~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
+++||+++. .+.|..+++..... .++..+... ....++.+--.++.+|++ ...++|+..++. |+..=.. +. .
T Consensus 435 ~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l-~~-~ 511 (791)
T 3m0c_C 435 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTL-FR-E 511 (791)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEE-EE-C
T ss_pred CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEE-Ee-C
Confidence 567887765 46777777653211 233333322 112244211123344443 345688888874 4432111 11 1
Q ss_pred cccCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 128 KHSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
.+..+..++ .+ ..+.+|+.. .++|.+++.......--.. . .-..|..+......+.+|++-.... +
T Consensus 512 ~l~~P~gIa-----VDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~-~l~~P~GLavD~~~~~LYwaD~~~~---~ 581 (791)
T 3m0c_C 512 NGSKPRAIV-----VDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-E-NIQWPNGITLDLLSGRLYWVDSKLH---S 581 (791)
T ss_dssp TTCCEEEEE-----EETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-S-SCSCEEEEEEETTTTEEEEEETTTT---E
T ss_pred CCCCcceEE-----EecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-C-CCCCceEEEEecCCCeEEEEeCCCC---c
Confidence 110111111 11 234566652 2567777754322221111 1 1112444432235788888653322 5
Q ss_pred EEEEECCCCceeeeeeeeccCCccCce-EEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 204 AYQINAMNGELLNHETAAFSGGFVGDV-ALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 204 v~aLd~~tG~~lw~~~v~~p~~~~~~~-~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
|..+|+ +|..+.... .....+.... +-+.++.|+|+|..++.+...+..+|+
T Consensus 582 I~~~d~-dG~~~~~v~-~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 582 ISSIDV-NGGNRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEEET-TSCSCEEEE-ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEec-CCCceEEEe-cCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 777786 454433321 1111222211 223566889999988889888877775
No 263
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=79.20 E-value=65 Score=37.71 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=37.5
Q ss_pred cCCCEEEEEcCC--------CEEEEEECC-CCcc-ceEEEcCC-CcceeeeeeeecCeEEEEEccCC--EEEEEeCCCCc
Q 002016 51 TGRKRVVVSTEE--------NVIASLDLR-HGEI-FWRHVLGI-NDVVDGIDIALGKYVITLSSDGS--TLRAWNLPDGQ 117 (981)
Q Consensus 51 ~~~~~VyvaT~~--------g~L~ALd~~-tG~i-vWR~~l~~-~~~i~~l~~~~~~~vV~Vs~~g~--~V~A~da~tG~ 117 (981)
.+++.|++++.+ +.|..+|.. +|+. ..++.... ...+....-.-++.+++++..++ +|+.||..+|+
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 345667666633 479999988 6732 22333322 11222221122334666665555 89999988887
Q ss_pred E
Q 002016 118 M 118 (981)
Q Consensus 118 l 118 (981)
.
T Consensus 277 ~ 277 (662)
T 3azo_A 277 A 277 (662)
T ss_dssp E
T ss_pred e
Confidence 4
No 264
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=79.12 E-value=69 Score=33.89 Aligned_cols=62 Identities=11% Similarity=0.188 Sum_probs=38.5
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcC-C--CcceeeeeeeecCeEEEEEccCCEEEEEeCCC
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLG-I--NDVVDGIDIALGKYVITLSSDGSTLRAWNLPD 115 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~-~--~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~t 115 (981)
+.+++++.+|.|.-.|.++|...-...+. . ...+..+...-.+..++.++.++.|+.||..+
T Consensus 25 ~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 25 GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp TEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred CEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 47889999999999999887543333442 1 22343332222344555566678999999864
No 265
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=78.82 E-value=64 Score=38.47 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=38.9
Q ss_pred cCCCEEEEEcC-----CCEEEEEECCCCccceEEEcCCCc-------ceeeeeee-ecCeEEEEEc-cC---CEEEEEeC
Q 002016 51 TGRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGIND-------VVDGIDIA-LGKYVITLSS-DG---STLRAWNL 113 (981)
Q Consensus 51 ~~~~~VyvaT~-----~g~L~ALd~~tG~ivWR~~l~~~~-------~i~~l~~~-~~~~vV~Vs~-~g---~~V~A~da 113 (981)
.+++++|.... .+.|...+..+|+ |++.++.+. .+.+.... .|..+++... .| ..|+.||.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ--EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSC--CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCC--cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 34667666543 3568888876664 777765321 12222122 3444555432 22 58999999
Q ss_pred CCCcEe
Q 002016 114 PDGQMV 119 (981)
Q Consensus 114 ~tG~ll 119 (981)
++|+.+
T Consensus 155 ~tg~~~ 160 (695)
T 2bkl_A 155 DSGEWS 160 (695)
T ss_dssp TTCCBC
T ss_pred CCCCCc
Confidence 999864
No 266
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.70 E-value=42 Score=35.85 Aligned_cols=69 Identities=7% Similarity=-0.117 Sum_probs=38.8
Q ss_pred CCCEEEEEcC---CCEEEEEECCCCccceEEEcCCCcceee-ee-eeecCeEEEEEccCCEEEEEeCCCCcEeEEEe
Q 002016 52 GRKRVVVSTE---ENVIASLDLRHGEIFWRHVLGINDVVDG-ID-IALGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (981)
Q Consensus 52 ~~~~VyvaT~---~g~L~ALd~~tG~ivWR~~l~~~~~i~~-l~-~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~ 123 (981)
+++.|+++.. ...|..+|..+|+. ++.......... .. -+.+..+++++. .+.++.||..+|+..--..
T Consensus 46 dG~~l~~~~~~~g~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 46 DGKKLLFAGDFDGNRNYYLLNLETQQA--VQLTEGKGDNTFGGFISTDERAFFYVKN-ELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTTEE--EECCCSSCBCTTTCEECTTSSEEEEEET-TTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEecCCCceEEEEECCCCcE--EEeecCCCCccccceECCCCCEEEEEEc-CCcEEEEECCCCCcEEEEe
Confidence 4556555533 24799999998874 222222211111 21 123445556555 4589999999998654433
No 267
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=78.14 E-value=84 Score=37.78 Aligned_cols=74 Identities=12% Similarity=0.114 Sum_probs=43.7
Q ss_pred CCCEEEEEcC-----CCEEEEEECCCCccc-eEEEcCCCcceeeeeeeecCeEEEEEcc---CCEEEEEeCCCCcEeEEE
Q 002016 52 GRKRVVVSTE-----ENVIASLDLRHGEIF-WRHVLGINDVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQMVWES 122 (981)
Q Consensus 52 ~~~~VyvaT~-----~g~L~ALd~~tG~iv-WR~~l~~~~~i~~l~~~~~~~vV~Vs~~---g~~V~A~da~tG~llWe~ 122 (981)
+++.|++.+. .+.|+.+|+.+|+.. |+......+......-..++.+++.+.. ...|+.||.++|...|+.
T Consensus 278 DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 357 (741)
T 1yr2_A 278 DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDT 357 (741)
T ss_dssp TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEE
T ss_pred CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEE
Confidence 3445665553 348999999988655 7776554422211111355556665542 357999998876334665
Q ss_pred ecc
Q 002016 123 FLR 125 (981)
Q Consensus 123 ~~~ 125 (981)
-+.
T Consensus 358 l~~ 360 (741)
T 1yr2_A 358 VVP 360 (741)
T ss_dssp EEC
T ss_pred Eec
Confidence 443
No 268
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=77.43 E-value=44 Score=39.55 Aligned_cols=106 Identities=5% Similarity=-0.024 Sum_probs=58.2
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcCCCc----ceeeeeee-ecCeEEEEEcc--------CCEEEEEeCCCCcEeE
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGIND----VVDGIDIA-LGKYVITLSSD--------GSTLRAWNLPDGQMVW 120 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~----~i~~l~~~-~~~~vV~Vs~~--------g~~V~A~da~tG~llW 120 (981)
+++++.+.+|.|...|+++|+..-. +.... .+..+... .+..+++.+.+ .+.++.||..+|+. .
T Consensus 28 g~~~~~~~dg~i~~~d~~~g~~~~~--~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 104 (723)
T 1xfd_A 28 TEFIYREQKGTVRLWNVETNTSTVL--IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-Q 104 (723)
T ss_dssp SCBCCCCSSSCEEEBCGGGCCCEEE--ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-E
T ss_pred CcEEEEeCCCCEEEEECCCCcEEEE--eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-E
Confidence 3444447889999999999987533 33221 12222122 34445554432 26899999999986 2
Q ss_pred EEeccCccc--cCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeE
Q 002016 121 ESFLRGSKH--SKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILW 168 (981)
Q Consensus 121 e~~~~~~~~--s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W 168 (981)
+........ ...+.+-| + +..++...++.|+.+|..+|+..-
T Consensus 105 ~l~~~~~~~~~~~~~~~SP-----d-G~~la~~~~~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 105 SLDPPEVSNAKLQYAGWGP-----K-GQQLIFIFENNIYYCAHVGKQAIR 148 (723)
T ss_dssp ECCCTTCCSCCCSBCCBCS-----S-TTCEEEEETTEEEEESSSSSCCEE
T ss_pred eccCCccccccccccEECC-----C-CCEEEEEECCeEEEEECCCCceEE
Confidence 222111100 01111111 2 334555567899999999987653
No 269
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=77.40 E-value=93 Score=34.46 Aligned_cols=196 Identities=12% Similarity=0.217 Sum_probs=101.6
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcCCCccee---eeeeeecCe---EEEEEcc---CCEEEEE--eCCCCcEeEEE
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVD---GIDIALGKY---VITLSSD---GSTLRAW--NLPDGQMVWES 122 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~---~l~~~~~~~---vV~Vs~~---g~~V~A~--da~tG~llWe~ 122 (981)
..++....++-|+.+|. +|+++=+........++ ++ ..++. +++++.. .++|+.| |+.++. |+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~--~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~--l~~ 115 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDF--PLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT--LQS 115 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEE--EETTEEEEEEEEEECSTTCCEEEEEEECTTTCC--EEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEeccc--ccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc--eee
Confidence 34444456689999999 99998654332211222 22 22333 4455543 4678777 767776 443
Q ss_pred ecc------Cc-cccCCceeecccccccCCc-EEEEE-eCCEEEEEEC---CCC----cEeEEEeccCcceeeeEEEEee
Q 002016 123 FLR------GS-KHSKPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSS---IDG----EILWTRDFAAESVEVQQVIQLD 186 (981)
Q Consensus 123 ~~~------~~-~~s~~~~~v~~~~~~~~~~-~V~V~-~~g~l~aLd~---~tG----~~~W~~~~~~~~~~~~~vv~s~ 186 (981)
-.. .+ ....+.++.- .+ ..+. ++||. .+|++.-++. .+| +++.++..+. .++.|+.-.
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~--~~-~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs---q~EgcvvDd 189 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYH--SQ-KTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS---QTEGMAADD 189 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEE--CT-TTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS---CEEEEEEET
T ss_pred ccccccCcCCCCCCeeEEEEEe--cC-CCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC---CcceEEEcC
Confidence 311 11 1112233210 01 1122 46665 4777766444 333 5567776654 356775223
Q ss_pred cCCeEEEEEecCCceeEEEEEECC-----CCceeeeeeee-ccCCccCceEEEc---CcEEEEEECCCCeEEEEEee-cC
Q 002016 187 ESDQIYVVGYAGSSQFHAYQINAM-----NGELLNHETAA-FSGGFVGDVALVS---SDTLVTLDTTRSILVTVSFK-NR 256 (981)
Q Consensus 187 ~~~~Vyvvg~~g~~~~~v~aLd~~-----tG~~lw~~~v~-~p~~~~~~~~~vg---~~~lv~~d~~~g~L~v~~L~-sg 256 (981)
..+.+|+ +-.+. -+..+|+. +++++...... ...++.+-.++.+ .++++..+..++++++.+.+ +.
T Consensus 190 ~~g~Lyv-~eEd~---GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~ 265 (355)
T 3amr_A 190 EYGRLYI-AEEDE---AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN 265 (355)
T ss_dssp TTTEEEE-EETTT---EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC
T ss_pred CCCeEEE-ecccc---eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC
Confidence 5678887 44332 28888855 35555333111 1123333222222 24788888777889999986 44
Q ss_pred eeeEEEEee
Q 002016 257 KIAFQETHL 265 (981)
Q Consensus 257 ~~~~~~~~l 265 (981)
+. +..+.+
T Consensus 266 ~~-vg~f~I 273 (355)
T 3amr_A 266 KY-VADFRI 273 (355)
T ss_dssp CE-EEEEEE
T ss_pred cE-EEEEEe
Confidence 42 455554
No 270
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=75.67 E-value=74 Score=34.73 Aligned_cols=70 Identities=4% Similarity=-0.038 Sum_probs=41.3
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEe
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~ 123 (981)
+..|..+++++.|.--|.++|..+-...-... .+..+... .+...++.++.++.|+.||..+|+...+..
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDEGPILAGYPLSS-PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETTEEEEEEEECSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred CCEEEEEECCCeEEEEECCCCceeeeecCCCC-CcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 34577788999999999988876544322211 12222111 233355556667899999999998877654
No 271
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=75.06 E-value=1.2e+02 Score=34.72 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=52.0
Q ss_pred cEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccC
Q 002016 146 SLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSG 224 (981)
Q Consensus 146 ~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~ 224 (981)
+.+++. .++.+..+|.++|+..--...+. . .+..+.++..++..+..++....++.+|+.+|+... +....
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~---~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~---l~~~~ 194 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG--F---GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV---FDSGE 194 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS--C---EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE---ECCSS
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC--c---eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE---eecCC
Confidence 344443 34444456666776443322222 1 122244666666555543333468999999998651 21111
Q ss_pred CccCceEEE-cCcEEEEEECCCC--eEEEEEeecCe
Q 002016 225 GFVGDVALV-SSDTLVTLDTTRS--ILVTVSFKNRK 257 (981)
Q Consensus 225 ~~~~~~~~v-g~~~lv~~d~~~g--~L~v~~L~sg~ 257 (981)
+....+.+. .+..++..+ ..+ .+++.++.+|.
T Consensus 195 ~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLE-TAREARLVTVDPRDGS 229 (582)
T ss_dssp CEEEEEEECTTSCEEEEEE-CSSCEEEEEECTTTCC
T ss_pred CccccceECCCCCEEEEcc-CCCeeEEEEEcCCCCc
Confidence 111122222 334555444 345 78888888776
No 272
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=75.06 E-value=71 Score=37.64 Aligned_cols=110 Identities=25% Similarity=0.327 Sum_probs=63.8
Q ss_pred CEEEEEECCCCccceEEEcCCCcc----eeeeeee--ecC---eEEEEEccC---------------------------C
Q 002016 63 NVIASLDLRHGEIFWRHVLGINDV----VDGIDIA--LGK---YVITLSSDG---------------------------S 106 (981)
Q Consensus 63 g~L~ALd~~tG~ivWR~~l~~~~~----i~~l~~~--~~~---~vV~Vs~~g---------------------------~ 106 (981)
..|.|.+. +|+.+||..+..... ...+.+. .++ .+++.+.+| .
T Consensus 151 ~~l~aY~l-dG~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpE 229 (591)
T 2zux_A 151 VLIDAYKL-DGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPE 229 (591)
T ss_dssp CEEEEECT-TSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCC
T ss_pred cEEEEEEC-CCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCc
Confidence 47899998 599999999865411 0011111 121 355544433 2
Q ss_pred EEEEEeCCCCcEeEEEeccCccccC-----------Cceeeccccccc--CCcEEEEE---eCCEEEEEECCCCc--EeE
Q 002016 107 TLRAWNLPDGQMVWESFLRGSKHSK-----------PLLLVPTNLKVD--KDSLILVS---SKGCLHAVSSIDGE--ILW 168 (981)
Q Consensus 107 ~V~A~da~tG~llWe~~~~~~~~s~-----------~~~~v~~~~~~~--~~~~V~V~---~~g~l~aLd~~tG~--~~W 168 (981)
.+..+|-.||+.+|......+.... +.-+... +-.+ ....|++. ....|.|+|.++|+ ++|
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~v-ayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W 308 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGI-AYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLW 308 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEE-ECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeE-EECCCCCceEEEeccccceeEEEEEECCCCceEEEE
Confidence 5999999999999998875321100 0001100 0001 12234433 25679999999997 589
Q ss_pred EEeccC
Q 002016 169 TRDFAA 174 (981)
Q Consensus 169 ~~~~~~ 174 (981)
++....
T Consensus 309 ~~d~~~ 314 (591)
T 2zux_A 309 TLDSSK 314 (591)
T ss_dssp EEETTS
T ss_pred EecCCC
Confidence 998864
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=74.94 E-value=92 Score=33.15 Aligned_cols=147 Identities=10% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCCC-cceeeeeeee-cCeEEEEEccC--CEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIAL-GKYVITLSSDG--STLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~-~~~vV~Vs~~g--~~V~A~da~tG~llWe~~~~~~ 127 (981)
++.||+++ ..+.|..+|+. |+..-. .+... ....++ +.. .++.++++..+ +.|+.++. +|+..=..- ..
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~-g~~~~~-~~~~~~~~P~~i-avdp~~g~ly~~d~~~~~~I~~~~~-dG~~~~~~~-~~- 161 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTK-GVKRKT-LFRENGSKPRAI-VVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLV-TE- 161 (316)
T ss_dssp TTEEEEEETTTTEEEEEETT-SSSEEE-EEECTTCCEEEE-EEETTTTEEEEEECSSSCEEEEEET-TSCCEEEEE-CS-
T ss_pred CCeEEEEECCCCEEEEEeCC-CCceEE-EEECCCCCcceE-EeCCCCCEEEEEccCCCCeEEEEcC-CCCCeEEEE-EC-
Confidence 56788874 46788888875 432211 11111 112233 122 34555555432 57888876 565432111 11
Q ss_pred cccCCceeeccccccc-CCcEEEEEe--CCEEEEEECCCCcE-eEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 128 KHSKPLLLVPTNLKVD-KDSLILVSS--KGCLHAVSSIDGEI-LWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~-~~~~V~V~~--~g~l~aLd~~tG~~-~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
.+..+..+. .+ .++.+|+.. .+++.++|...+.. .+- ........|..+. ..++.+|+....++ +
T Consensus 162 ~~~~P~gla-----~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~-~~~~~~~~P~gia--v~~~~ly~~d~~~~---~ 230 (316)
T 1ijq_A 162 NIQWPNGIT-----LDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL-EDEKRLAHPFSLA--VFEDKVFWTDIINE---A 230 (316)
T ss_dssp SCSCEEEEE-----EETTTTEEEEEETTTTEEEEEETTSCSCEEEE-ECTTTTSSEEEEE--EETTEEEEEETTTT---E
T ss_pred CCCCceEEE-----EeccCCEEEEEECCCCeEEEEecCCCceEEEe-ecCCccCCcEEEE--EECCEEEEEECCCC---e
Confidence 110111111 12 245677753 67888888753322 221 1111111244442 35688888664443 5
Q ss_pred EEEEECCCCceee
Q 002016 204 AYQINAMNGELLN 216 (981)
Q Consensus 204 v~aLd~~tG~~lw 216 (981)
+..+|..+|+.+-
T Consensus 231 V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 231 IFSANRLTGSDVN 243 (316)
T ss_dssp EEEEETTTCCCCE
T ss_pred EEEEeCCCCcceE
Confidence 8888888887553
No 274
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=74.89 E-value=38 Score=39.36 Aligned_cols=154 Identities=10% Similarity=0.066 Sum_probs=77.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccc---eE------EEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCc-EeEE
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIF---WR------HVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQ-MVWE 121 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~iv---WR------~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~-llWe 121 (981)
.+.+..++.+|.|.-.|..+|+.. .- ..+... ..+..+.. ..++.++.|+.++.|+-||..+|. +...
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~-s~~~~lasgs~DgtV~lWD~~~~~~~~~~ 303 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDF-LSPTTVVCGFKNGFVAEFDLTDPEVPSFY 303 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEE-SSSSEEEEEETTSEEEEEETTBCSSCSEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEe-cCCCeEEEEeCCCEEEEEECCCCCCceEE
Confidence 356888999999999999887532 10 011111 12223311 123456556677899999999884 3443
Q ss_pred EeccCccccCCceeecccccccCCc-EEEE-E-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecC
Q 002016 122 SFLRGSKHSKPLLLVPTNLKVDKDS-LILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (981)
Q Consensus 122 ~~~~~~~~s~~~~~v~~~~~~~~~~-~V~V-~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g 198 (981)
.......+ .++... . ..++ .+++ . .||.+.-.|..+|+..=.............+..+.. +..++.+..+
T Consensus 304 ~~~H~~~V-~sv~~~--~---s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d 376 (524)
T 2j04_B 304 DQVHDSYI-LSVSTA--Y---SDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGA 376 (524)
T ss_dssp EECSSSCE-EEEEEE--C---CTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT-TTEEEEECSS
T ss_pred eecccccE-EEEEEE--c---CCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC-cCeEEEeCCC
Confidence 44333222 111001 0 1122 3444 3 489999999888764322211110000112221222 3344443332
Q ss_pred CceeEEEEEECCCCceeee
Q 002016 199 SSQFHAYQINAMNGELLNH 217 (981)
Q Consensus 199 ~~~~~v~aLd~~tG~~lw~ 217 (981)
+ .+...|+.+|..+..
T Consensus 377 ~---tv~lwd~~~~~~~~~ 392 (524)
T 2j04_B 377 S---SLRAVPSRAAFAVHP 392 (524)
T ss_dssp S---EEEEEETTCTTCCEE
T ss_pred C---cEEEEECccccccee
Confidence 2 467778888876543
No 275
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=74.15 E-value=38 Score=39.41 Aligned_cols=111 Identities=16% Similarity=0.104 Sum_probs=63.3
Q ss_pred CCEEEEEcCCCEEEEEECCCCcc-ceEEEcCCCcceeeee-e-eecC-eEEEEEccCCEEEEEeCCCCcEeEEEeccC--
Q 002016 53 RKRVVVSTEENVIASLDLRHGEI-FWRHVLGINDVVDGID-I-ALGK-YVITLSSDGSTLRAWNLPDGQMVWESFLRG-- 126 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~i-vWR~~l~~~~~i~~l~-~-~~~~-~vV~Vs~~g~~V~A~da~tG~llWe~~~~~-- 126 (981)
++.+++++.+|.|.-.|.++|+. ........ ..+..+. . ...+ .+++-++.+++|+-||..+|+..-......
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~-~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHD-SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECSS-SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeeccc-ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 45799999999999999999853 33222222 2233331 1 1222 455445667899999999887543222111
Q ss_pred ccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe
Q 002016 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~ 171 (981)
..+ ..+.+-| + +..++.. .++.+...|..+|....+..
T Consensus 356 ~~v-~~v~fsp-----~-~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 356 SNL-VPVVYCP-----Q-IYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp CSC-CCEEEET-----T-TTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred Ccc-cceEeCC-----C-cCeEEEeCCCCcEEEEECcccccceeee
Confidence 111 1222221 1 2233333 47789999998888766544
No 276
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=72.04 E-value=1.1e+02 Score=36.66 Aligned_cols=63 Identities=16% Similarity=0.120 Sum_probs=39.7
Q ss_pred CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEcc---CCEEEEEeCCCCcE-eEEEecc
Q 002016 63 NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQM-VWESFLR 125 (981)
Q Consensus 63 g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~---g~~V~A~da~tG~l-lWe~~~~ 125 (981)
+.|+-+|+.+|+..|+......+......-..++.+++++.. ..+|+.+|..+|.. .|+.-+.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~ 325 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP 325 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec
Confidence 589999998887667765544322211111356667776653 26899999988764 5775433
No 277
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=71.65 E-value=57 Score=37.63 Aligned_cols=67 Identities=12% Similarity=-0.015 Sum_probs=42.0
Q ss_pred cCCCEEEEEcCC----CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCC--EEEEEeCCCCcEe
Q 002016 51 TGRKRVVVSTEE----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGS--TLRAWNLPDGQMV 119 (981)
Q Consensus 51 ~~~~~VyvaT~~----g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~--~V~A~da~tG~ll 119 (981)
.+++.++.++.+ +.|+.+|+.+|+.. +.......+......-++..++.+..++ +|+.||.++|+..
T Consensus 159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~~--~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR--VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCCCE--EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEEcCCCCeEEEEEcCCCCCce--EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 356667766655 68999999999854 3333332222221122344455454455 8999999999987
No 278
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=71.47 E-value=52 Score=39.04 Aligned_cols=148 Identities=8% Similarity=0.047 Sum_probs=76.1
Q ss_pred cCCCEEEEEcCCCEEEEEECCCCccceEEEcCCCc-----ceeeeeeeecCeEEEEEccCCEEEEEeCCCCcE-------
Q 002016 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM------- 118 (981)
Q Consensus 51 ~~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~-----~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~l------- 118 (981)
.++..+.+++.+|.+...|.++ .+.. ++... .+..+.-..++..++.++.+++|+-||..+|.+
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~---~l~~-l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK---MLTN-LDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE---EEEE-CCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCc---eeee-ccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence 4567788889999888888433 4544 23121 233332234566777677788999999999863
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcE--eEEEeccCcceeeeEEEEeecCCeEEEEE
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI--LWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~--~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg 195 (981)
+-......+.......-+. -..++ +++. .|+.++..|..+++. .|..-..........+.-+ + ...+.+
T Consensus 171 l~ti~~~~~gh~~~V~sVa----wSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~~LASa 242 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIV----WYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D-YKVVLT 242 (588)
T ss_dssp EEEEECSCTTCCCCEEEEE----EETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T-TEEEEE
T ss_pred eeeeecccccccccEEEEE----EcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C-CEEEEE
Confidence 3333322211100111110 01133 3333 477788888777763 2332111111112222212 3 333434
Q ss_pred ecCCceeEEEEEECCCCce
Q 002016 196 YAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 196 ~~g~~~~~v~aLd~~tG~~ 214 (981)
..| .+...|..+|+.
T Consensus 243 ~~~----tIkLWd~~~~~~ 257 (588)
T 2j04_A 243 CPG----YVHKIDLKNYSI 257 (588)
T ss_dssp CSS----EEEEEETTTTEE
T ss_pred eCC----eEEEEECCCCeE
Confidence 332 577778887777
No 279
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=70.22 E-value=29 Score=36.73 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=43.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCC-cceeeeeee--ecCeEEEEEccCCEEEEEeCCCCc
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIA--LGKYVITLSSDGSTLRAWNLPDGQ 117 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~--~~~~vV~Vs~~g~~V~A~da~tG~ 117 (981)
+++.+.+++.++.|.-.|.++|+..-...+... ..+..+... ..+..++.++.++.|+.||..+|+
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 356799999999999999999875444444322 233333111 123444445566799999999985
No 280
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=69.02 E-value=94 Score=37.43 Aligned_cols=149 Identities=11% Similarity=0.073 Sum_probs=78.0
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCc-----ceeeeeeeecCeEEEEEccCCEEEEEeCCC------CcEe--
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSSDGSTLRAWNLPD------GQMV-- 119 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~-----~i~~l~~~~~~~vV~Vs~~g~~V~A~da~t------G~ll-- 119 (981)
++.|+++|. +-|..+|+++|+...-....... .+..+ ....++.+.+++.++-|..+|..+ +...
T Consensus 383 ~g~lWigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i-~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~ 460 (758)
T 3ott_A 383 EQQLWIATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYI-FEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAE 460 (758)
T ss_dssp TSCEEEEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEE-EECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECS
T ss_pred CCCEEEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEE-EEcCCCCEEEEECCCceEEEccccccccCCcceecc
Confidence 567999995 56999999998643221111111 12222 224556777777555688888653 2221
Q ss_pred EEEeccCccccCC-c-eeecccccccCCcEEEE--EeCCEEEEEECCCCcEeEEEeccC-cceeeeEEEEeecCCeEEEE
Q 002016 120 WESFLRGSKHSKP-L-LLVPTNLKVDKDSLILV--SSKGCLHAVSSIDGEILWTRDFAA-ESVEVQQVIQLDESDQIYVV 194 (981)
Q Consensus 120 We~~~~~~~~s~~-~-~~v~~~~~~~~~~~V~V--~~~g~l~aLd~~tG~~~W~~~~~~-~~~~~~~vv~s~~~~~Vyvv 194 (981)
+.+....+ ++.. . .+. .+.++.+.+ .+.+.|.++|.++++..--..... ....+..+ .....+.+++.
T Consensus 461 ~~~~~~~~-l~~~~i~~i~-----~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i-~~d~~g~lWig 533 (758)
T 3ott_A 461 QNYSVHNG-LSGMFINQII-----PDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYL-LCDEDGLLWVG 533 (758)
T ss_dssp EEECGGGT-CSCSCEEEEE-----ECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEE-EECTTSCEEEE
T ss_pred cccccccc-cccceeeeEE-----EcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceE-EECCCCCEEEE
Confidence 22222111 1011 1 111 134556777 455679999999987543211111 11112222 23467888875
Q ss_pred EecCCceeEEEEEECCCCcee
Q 002016 195 GYAGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 195 g~~g~~~~~v~aLd~~tG~~l 215 (981)
+ .++ +..+|+.+++..
T Consensus 534 t-~~G----l~~~~~~~~~~~ 549 (758)
T 3ott_A 534 F-HGG----VMRINPKDESQQ 549 (758)
T ss_dssp E-TTE----EEEECC--CCCC
T ss_pred e-cCc----eEEEecCCCceE
Confidence 5 343 899999888654
No 281
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=68.92 E-value=75 Score=38.32 Aligned_cols=156 Identities=7% Similarity=0.055 Sum_probs=83.1
Q ss_pred CCEEEEEcCC-------CEEEEEECCCCccceEEEcCCCcc-eeeeeeee-cCeEEEEEccCC--EEEEEeCCCCcEeEE
Q 002016 53 RKRVVVSTEE-------NVIASLDLRHGEIFWRHVLGINDV-VDGIDIAL-GKYVITLSSDGS--TLRAWNLPDGQMVWE 121 (981)
Q Consensus 53 ~~~VyvaT~~-------g~L~ALd~~tG~ivWR~~l~~~~~-i~~l~~~~-~~~vV~Vs~~g~--~V~A~da~tG~llWe 121 (981)
++.+|+..+. +.+..+|+.+. .|+..-+.+.. ........ ++.++++||.++ .+..||..+++ |+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTT--EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCC--cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eE
Confidence 7788887542 46888998886 58876332211 11111233 556666676432 69999998875 88
Q ss_pred EeccCccccCCceeecccccc-c-CCcEEEEEe----C-----CEEEEEECCCCc----EeEEEeccCcce--eeeEEEE
Q 002016 122 SFLRGSKHSKPLLLVPTNLKV-D-KDSLILVSS----K-----GCLHAVSSIDGE----ILWTRDFAAESV--EVQQVIQ 184 (981)
Q Consensus 122 ~~~~~~~~s~~~~~v~~~~~~-~-~~~~V~V~~----~-----g~l~aLd~~tG~----~~W~~~~~~~~~--~~~~vv~ 184 (981)
.-...+....+. ....... . .++.+++.+ + ..+..+|..+.. ..|+.-.+.+.. ....++
T Consensus 527 ~~~~~g~~p~~r--~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~- 603 (695)
T 2zwa_A 527 DVTPKDEFFQNS--LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK- 603 (695)
T ss_dssp ECCCSSGGGGSC--CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-
T ss_pred EccCCCCCCCcc--cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-
Confidence 654321110000 0000011 1 125566653 1 468999998886 457754332111 011121
Q ss_pred eecCCeEEEEEecCC-----ceeEEEEEECCCCceeee
Q 002016 185 LDESDQIYVVGYAGS-----SQFHAYQINAMNGELLNH 217 (981)
Q Consensus 185 s~~~~~Vyvvg~~g~-----~~~~v~aLd~~tG~~lw~ 217 (981)
...++.+|++|-... ..-.+..+|+.++ .|+
T Consensus 604 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~--~W~ 639 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE--TLT 639 (695)
T ss_dssp EEETTEEEEECCBCSSCCCCTTTSEEEEETTTT--EEE
T ss_pred EeCCCEEEEECCccCCCCCCCCCeEEEEECCCC--eEE
Confidence 123388888765321 1124888999877 476
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=68.38 E-value=1.3e+02 Score=35.59 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=43.3
Q ss_pred CCCEEEEEcC--CCEEEEEECCCCccceEEEcCCCc-ceeeeeeee-cCeEEEEEc-cC-----CEEEEEeCCCCcEeEE
Q 002016 52 GRKRVVVSTE--ENVIASLDLRHGEIFWRHVLGIND-VVDGIDIAL-GKYVITLSS-DG-----STLRAWNLPDGQMVWE 121 (981)
Q Consensus 52 ~~~~VyvaT~--~g~L~ALd~~tG~ivWR~~l~~~~-~i~~l~~~~-~~~vV~Vs~-~g-----~~V~A~da~tG~llWe 121 (981)
.+++||+... .+.+..+|+.++ .|+..-+.+. ......... ++.++++|| .+ ..+..||+.+++ |+
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~--W~ 327 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WT 327 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE--EE
T ss_pred CCCCEEEeCCCCCCceEEecCcCC--ceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc--ce
Confidence 3677888765 357999999988 5987533221 111111234 556667676 22 469999999876 88
Q ss_pred Ee
Q 002016 122 SF 123 (981)
Q Consensus 122 ~~ 123 (981)
.-
T Consensus 328 ~~ 329 (656)
T 1k3i_A 328 SL 329 (656)
T ss_dssp EE
T ss_pred eC
Confidence 64
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=68.37 E-value=1.3e+02 Score=32.01 Aligned_cols=188 Identities=14% Similarity=0.027 Sum_probs=90.8
Q ss_pred CCEEEEEcC-CCEEEEEECCC---CccceEEEcCCC-cceeeeeeee-cCeEEEEE-ccCCEEEEEeCCCCcEeEEEecc
Q 002016 53 RKRVVVSTE-ENVIASLDLRH---GEIFWRHVLGIN-DVVDGIDIAL-GKYVITLS-SDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~t---G~ivWR~~l~~~-~~i~~l~~~~-~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~ 125 (981)
+++||+++. .+.|..+|+.+ |.. .+..+... ....++ +.. .++.++++ ...+.|..+|........-..
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~~~~p~gl-avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-- 116 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRDIQAPDGL-AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-- 116 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEE-EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE--
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCCCCCcCEE-EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE--
Confidence 678999875 48999999875 221 12222221 112244 222 23444444 445789999875333222111
Q ss_pred CccccCCceeeccccccc-CCcEEEEEe--C-CEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCce
Q 002016 126 GSKHSKPLLLVPTNLKVD-KDSLILVSS--K-GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQ 201 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~-~~~~V~V~~--~-g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~ 201 (981)
. .+..+..+. .+ .++.+|+.. . ++|++++. +|...=..-... -..|..+.....++.+|+.....+
T Consensus 117 ~-~~~~P~~ia-----vdp~~g~ly~~d~~~~~~I~~~~~-dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~~-- 186 (316)
T 1ijq_A 117 E-NGSKPRAIV-----VDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLH-- 186 (316)
T ss_dssp C-TTCCEEEEE-----EETTTTEEEEEECSSSCEEEEEET-TSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTT--
T ss_pred C-CCCCcceEE-----eCCCCCEEEEEccCCCCeEEEEcC-CCCCeEEEEECC-CCCceEEEEeccCCEEEEEECCCC--
Confidence 1 110111111 12 255677753 2 68888885 454322211111 112434432235788998654332
Q ss_pred eEEEEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 202 FHAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 202 ~~v~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
++..+|.. |...... +.....+... -+.+.++.++|+|..++.+...+..+|+
T Consensus 187 -~I~~~d~d-g~~~~~~-~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 187 -SISSIDVN-GGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp -EEEEEETT-SCSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred -eEEEEecC-CCceEEE-eecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 58888875 4322111 1111112111 1123457788888887888888876665
No 284
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=68.13 E-value=83 Score=39.53 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=57.2
Q ss_pred CCEEEEEcCCCEEE-EEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcccc
Q 002016 53 RKRVVVSTEENVIA-SLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (981)
Q Consensus 53 ~~~VyvaT~~g~L~-ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s 130 (981)
++.++++++++.+. .+|..+|+.. .+... ..+..+...-++..++.++.++.++.||..+|++.-.........
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~---~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v- 423 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAE---KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI- 423 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEE---ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-
T ss_pred CCeEEEEECCCceEEEEECCCCCce---EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc-
Confidence 34577777788888 8888877642 22221 122222122234444445556799999999999876553332221
Q ss_pred CCceeecccccccCCcEEEEE-eC----------CEEEEEECCCCc
Q 002016 131 KPLLLVPTNLKVDKDSLILVS-SK----------GCLHAVSSIDGE 165 (981)
Q Consensus 131 ~~~~~v~~~~~~~~~~~V~V~-~~----------g~l~aLd~~tG~ 165 (981)
....+-| + +..++.. .+ +.++.+|..+|+
T Consensus 424 ~~~~~Sp-----D-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 424 TDFTISD-----N-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CCEEECT-----T-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred cceEECC-----C-CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 1222221 1 3334333 32 378888888876
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=68.08 E-value=1.6e+02 Score=33.07 Aligned_cols=199 Identities=12% Similarity=0.125 Sum_probs=94.6
Q ss_pred CCEEEEEcCCC-----EEEEEECCCCccceEEEcCCCcceeeeeeeec-CeEEEEEc-cCCEEEEEeCCCCcEeEEEecc
Q 002016 53 RKRVVVSTEEN-----VIASLDLRHGEIFWRHVLGINDVVDGIDIALG-KYVITLSS-DGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 53 ~~~VyvaT~~g-----~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~-~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~ 125 (981)
++.||+++..+ .+..+++..+ ..+...+.......++ +... ++.++++. ..++|+.+|+.+|...+.....
T Consensus 192 dG~lyVad~~~~~~~~gv~~~~~~~~-~~~~~~~~~~~~P~gi-avd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~ 269 (433)
T 4hw6_A 192 NGDMVVVDDQSSDTNTGIYLFTRASG-FTERLSLCNARGAKTC-AVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM 269 (433)
T ss_dssp TCCEEEEECCSCTTSEEEEEECGGGT-TCCEEEEEECSSBCCC-EECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC
T ss_pred CCCEEEEcCCCCcccceEEEEECCCC-eeccccccccCCCCEE-EEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc
Confidence 34488887633 4666665433 3333333211111233 1222 45666654 4578999999999885544322
Q ss_pred CccccCCceeecccccccCCcEEEEE--eCCEEEEEECC--CCcEe----EEEeccC-c---------ce-eeeEEEEe-
Q 002016 126 GSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSI--DGEIL----WTRDFAA-E---------SV-EVQQVIQL- 185 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~--tG~~~----W~~~~~~-~---------~~-~~~~vv~s- 185 (981)
...- .+..+.-. ..++.+|+. .++++++++.. +|... +.-.... + .+ .|..+...
T Consensus 270 ~~~~-~~~~ia~d----pdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~ 344 (433)
T 4hw6_A 270 DTKG-SNFHIVWH----PTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVK 344 (433)
T ss_dssp SCCS-SCEEEEEC----TTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEE
T ss_pred CCCC-CcccEEEe----CCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEc
Confidence 2110 11111100 123457776 37899997744 55321 1111000 0 01 24444311
Q ss_pred -------ecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeec--cCC-----ccCceEEEcCcEEEEEECCCCeEEEE
Q 002016 186 -------DESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAF--SGG-----FVGDVALVSSDTLVTLDTTRSILVTV 251 (981)
Q Consensus 186 -------~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~--p~~-----~~~~~~~vg~~~lv~~d~~~g~L~v~ 251 (981)
...+.+|+....+. ++..+++ +|.+.--.-... ..+ .....- .....=+|+|..+|.|++.
T Consensus 345 n~~y~~dd~~g~lyvaD~~n~---~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~-~~~P~giavd~~~g~lyVa 419 (433)
T 4hw6_A 345 NEAYAGEEDEYDFYFCDRDSH---TVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQAL-FNHPTSIAYDMKRKCFYIG 419 (433)
T ss_dssp CGGGTTSSCCEEEEEEETTTT---EEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCB-CSSEEEEEEETTTTEEEEE
T ss_pred cccccccCCCCcEEEEECCCC---EEEEECC-CCCEEEEEeCCCCCccccCCCccccccE-eCCCcEEEEECCCCEEEEE
Confidence 35667887654333 5777775 775432111000 001 000000 0123346777557888888
Q ss_pred EeecCeeeEEEEee
Q 002016 252 SFKNRKIAFQETHL 265 (981)
Q Consensus 252 ~L~sg~~~~~~~~l 265 (981)
|..+.. ++.+.+
T Consensus 420 D~~n~r--Ir~i~~ 431 (433)
T 4hw6_A 420 DCDNHR--VRKIAP 431 (433)
T ss_dssp EGGGTE--EEEEEE
T ss_pred eCCCCE--EEEEec
Confidence 887776 555554
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=68.00 E-value=1.5e+02 Score=32.63 Aligned_cols=186 Identities=17% Similarity=0.063 Sum_probs=85.6
Q ss_pred CCEEEEEc-CCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
+++||+++ ..+.|..+++..+. .+..+... ....++.+.-.++.++++ ...+.|...+.. |+..=. .+... +
T Consensus 127 ~~~ly~~D~~~~~I~r~~~~g~~--~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~~~~-l~~~~-l 201 (386)
T 3v65_B 127 RELVFWSDVTLDRILRANLNGSN--VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKV-LLWQS-L 201 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTSCC--EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT-SCSCEE-EECSS-C
T ss_pred CCeEEEEeCCCCcEEEEecCCCC--cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCceEE-eecCC-C
Confidence 56777775 45677888876554 22222221 111234111123444443 334577777764 432111 11111 1
Q ss_pred cCCceeeccccccc-CCcEEEEEe--C-CEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEE
Q 002016 130 SKPLLLVPTNLKVD-KDSLILVSS--K-GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (981)
Q Consensus 130 s~~~~~v~~~~~~~-~~~~V~V~~--~-g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~ 205 (981)
..+..++ .+ .++.+|+.. + ++|++++.. |..+-..-.... ..|..+.....++.+|++-...+ ++.
T Consensus 202 ~~P~gia-----vdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~~~---~I~ 271 (386)
T 3v65_B 202 EKPRAIA-----LHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAKHH---VIE 271 (386)
T ss_dssp SCEEEEE-----EETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETTTT---EEE
T ss_pred CCCcEEE-----EEcCCCeEEEeccCCCCEEEEEeCC-CCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECCCC---EEE
Confidence 0111111 12 245666652 3 678887754 332222211111 11334432336788888654333 577
Q ss_pred EEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 206 QINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 206 aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+|.. |...... ...++... -+.+.++.++|+|..++.+...+..+|+
T Consensus 272 ~~d~d-G~~~~~~---~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 272 RANLD-GSHRKAV---ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EECTT-SCSCEEE---ECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEeCC-CCeeEEE---EECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 78864 4322111 11112111 1122566788888877888777755555
No 287
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=67.93 E-value=1.7e+02 Score=36.74 Aligned_cols=145 Identities=6% Similarity=-0.105 Sum_probs=75.1
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC-Cc-ceeeeeeeecCeEEEEEccCCEEE-EEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-ND-VVDGIDIALGKYVITLSSDGSTLR-AWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~-~~-~i~~l~~~~~~~vV~Vs~~g~~V~-A~da~tG~llWe~~~~~~~~ 129 (981)
+..+++++ .+.|..+|..+|+.. + +.. .. .+.......++.+++++. ...++ .||..+|+.. .+.....
T Consensus 308 G~~la~~~-~~~i~~~~~~~~~~~--~-~~~~~~~~~~~~~~sdg~~l~~~s~-~~~l~~~~d~~~~~~~---~l~~~~~ 379 (1045)
T 1k32_A 308 GDLIAFVS-RGQAFIQDVSGTYVL--K-VPEPLRIRYVRRGGDTKVAFIHGTR-EGDFLGIYDYRTGKAE---KFEENLG 379 (1045)
T ss_dssp GGCEEEEE-TTEEEEECTTSSBEE--E-CSCCSCEEEEEECSSSEEEEEEEET-TEEEEEEEETTTCCEE---ECCCCCC
T ss_pred CCEEEEEE-cCEEEEEcCCCCceE--E-ccCCCcceEEeeeEcCCCeEEEEEC-CCceEEEEECCCCCce---EecCCcc
Confidence 44455555 778888888887632 2 222 11 222221221223444344 56888 8999888653 2221111
Q ss_pred -cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecC------Cce
Q 002016 130 -SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG------SSQ 201 (981)
Q Consensus 130 -s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g------~~~ 201 (981)
.....+- ..+..+++. .++.++.+|.++|+..-......... ..+..+.++..+.+.+..+ ...
T Consensus 380 ~~~~~~~S------pDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v--~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 380 NVFAMGVD------RNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI--TDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp SEEEEEEC------TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC--CCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred ceeeeEEC------CCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc--cceEECCCCCeEEEEecCccccccCCCC
Confidence 0111111 113344444 47899999999999876653332221 1222233444454444432 123
Q ss_pred eEEEEEECCCCc
Q 002016 202 FHAYQINAMNGE 213 (981)
Q Consensus 202 ~~v~aLd~~tG~ 213 (981)
..+..+|+.+|+
T Consensus 452 ~~i~l~d~~~g~ 463 (1045)
T 1k32_A 452 QAIHVYDMEGRK 463 (1045)
T ss_dssp EEEEEEETTTTE
T ss_pred CeEEEEECCCCc
Confidence 468888999887
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=66.94 E-value=1.4e+02 Score=31.97 Aligned_cols=187 Identities=12% Similarity=0.017 Sum_probs=90.1
Q ss_pred CCEEEEEcC-CCEEEEEECCCCcc-ceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEI-FWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~i-vWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
+++||+++- .+.|..+++..+.. .+-..-.- ....++.+.-.++.++++ ...+.+..+++.......-. .. .+
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l-~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~--~~-~~ 121 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF--WQ-EL 121 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECC-SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CS-SC
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCC-CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE--eC-CC
Confidence 578888864 57888898876642 22211110 112244111123444444 33468888887432222111 11 11
Q ss_pred cCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEE
Q 002016 130 SKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (981)
Q Consensus 130 s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~ 205 (981)
..+..+. .+ .++.+|+.. .++|++++.. |..+-..-... -..|..+.....++.+|+.-...+ ++.
T Consensus 122 ~~P~gia-----vdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~~~---~I~ 191 (318)
T 3sov_A 122 DQPRAIA-----LDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLN---FIH 191 (318)
T ss_dssp SSEEEEE-----EEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTT---EEE
T ss_pred CCccEEE-----EeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECC-CCCccEEEEeccCCEEEEEECCCC---EEE
Confidence 0111111 11 245666653 4678888753 43322221111 112334432235788998654332 578
Q ss_pred EEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 206 QINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 206 aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
.+|.. |...-. +. ...+... -+.+.++.++|+|..++.+...+..+|+
T Consensus 192 ~~d~d-G~~~~~--~~-~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 192 KSNLD-GTNRQA--VV-KGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEETT-SCSCEE--EE-CSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCC-CCceEE--Ee-cCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 88875 422211 11 1112111 1223466788889888888888877776
No 289
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=66.58 E-value=1.6e+02 Score=32.55 Aligned_cols=147 Identities=13% Similarity=0.076 Sum_probs=80.9
Q ss_pred cCCEEEEEeC-CCCcEeEEEeccCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcc-eee
Q 002016 104 DGSTLRAWNL-PDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAES-VEV 179 (981)
Q Consensus 104 ~g~~V~A~da-~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~-~~~ 179 (981)
.++.|+.|+. .+|+.+=.....++.. ....+.+ ..+++..++. .|+.+.-.|.++|+.+.+....... ...
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v-~~l~fs~----~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEE-TILTFAE----VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASV 229 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSS-CEEEEEE----EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCC
T ss_pred CCCcEEEEEECCCCceeeeeccCCCce-eeEEeec----cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeee
Confidence 3678888888 5688776666665433 1112221 1223335553 4999999999999999988643211 111
Q ss_pred eEEEEeecCCeEEEEEe---------cCCceeEEEEEECCCCceeeeeeeeccCCccCceEE--EcCcEEEEEECCCCeE
Q 002016 180 QQVIQLDESDQIYVVGY---------AGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVAL--VSSDTLVTLDTTRSIL 248 (981)
Q Consensus 180 ~~vv~s~~~~~Vyvvg~---------~g~~~~~v~aLd~~tG~~lw~~~v~~p~~~~~~~~~--vg~~~lv~~d~~~g~L 248 (981)
..+..+. ++..++.+. .|+....+...|+.+|+.+....+..|.+-.+..+- .++..+++.. .++.+
T Consensus 230 ~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS-~DgTI 307 (356)
T 2w18_A 230 CHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAIL-TSGTI 307 (356)
T ss_dssp EEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEE-TTSCE
T ss_pred EEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEc-CCCcE
Confidence 1111122 334333221 233334566689999988765544444333332210 1223555554 45789
Q ss_pred EEEEeecCe
Q 002016 249 VTVSFKNRK 257 (981)
Q Consensus 249 ~v~~L~sg~ 257 (981)
++=|+.+|+
T Consensus 308 kIWDl~tGk 316 (356)
T 2w18_A 308 AIWDLLLGQ 316 (356)
T ss_dssp EEEETTTCS
T ss_pred EEEECCCCc
Confidence 999999987
No 290
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=66.24 E-value=2.1e+02 Score=33.82 Aligned_cols=143 Identities=14% Similarity=0.046 Sum_probs=66.4
Q ss_pred CEEEEEECCCCccc-eEEEcCCCcceeeee-eeecCeEEEEEccC------------CEEEEEeCCCCc----EeEEEec
Q 002016 63 NVIASLDLRHGEIF-WRHVLGINDVVDGID-IALGKYVITLSSDG------------STLRAWNLPDGQ----MVWESFL 124 (981)
Q Consensus 63 g~L~ALd~~tG~iv-WR~~l~~~~~i~~l~-~~~~~~vV~Vs~~g------------~~V~A~da~tG~----llWe~~~ 124 (981)
..|.-+|.++|+.+ =. .++.. ...... ...+..+++.+.++ .+|+.|+..+|. ++++..-
T Consensus 147 ~~i~v~dl~tg~~~~~~-~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~ 224 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVD-VIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG 224 (695)
T ss_dssp CEEEEEETTTCCBCSSC-CBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC
T ss_pred EEEEEEECCCCCCcCCc-ccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC
Confidence 58999999999864 11 11111 001111 12344566654422 248999988886 4443221
Q ss_pred cCccccCCceeecccccccCCcEEEE-EeCC----EEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCC
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSLILV-SSKG----CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGS 199 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~V~V-~~~g----~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~ 199 (981)
..... .+..+- .+ +..+++ ..++ .++.++..+|+..--........ ..+ ...++ +|+.+..+.
T Consensus 225 ~~~~~-~~~~~S-----pD-G~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~-~~~g~-l~~~s~~~~ 292 (695)
T 2bkl_A 225 DPTTF-LQSDLS-----RD-GKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY---EVH-AWKDR-FYVLTDEGA 292 (695)
T ss_dssp CTTCE-EEEEEC-----TT-SCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE---EEE-EETTE-EEEEECTTC
T ss_pred CCEEE-EEEEEC-----CC-CCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE---EEE-ecCCc-EEEEECCCC
Confidence 11100 001111 11 233333 3333 67777666664322221111111 111 12444 666654333
Q ss_pred ceeEEEEEECCCCce-eeeee
Q 002016 200 SQFHAYQINAMNGEL-LNHET 219 (981)
Q Consensus 200 ~~~~v~aLd~~tG~~-lw~~~ 219 (981)
.+.+|+.+|+.+|+. .|+.-
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l 313 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEI 313 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEE
T ss_pred CCCEEEEEeCCCCCccCCeEE
Confidence 346799999988864 35543
No 291
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=65.11 E-value=27 Score=41.26 Aligned_cols=107 Identities=21% Similarity=0.246 Sum_probs=61.7
Q ss_pred EEEEc---CCCEEEEEECCCC--ccceEEEcCCCc--ce-----eeeeee----ecC-eEEEEEccCCEEEEEeCCCCcE
Q 002016 56 VVVST---EENVIASLDLRHG--EIFWRHVLGIND--VV-----DGIDIA----LGK-YVITLSSDGSTLRAWNLPDGQM 118 (981)
Q Consensus 56 VyvaT---~~g~L~ALd~~tG--~ivWR~~l~~~~--~i-----~~l~~~----~~~-~vV~Vs~~g~~V~A~da~tG~l 118 (981)
++++- ...+|+|.|.++| +.+|+.....+. .. ..+.++ .|. .+|+ ++ .++| .+|++
T Consensus 286 ~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~-Gs-----~~iD-~dG~~ 358 (620)
T 2zuy_A 286 LVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIY-GA-----MAVD-HDGTG 358 (620)
T ss_dssp EEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEE-TT-----EEEC-TTSSE
T ss_pred EEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEE-ee-----eEEC-CCCCE
Confidence 44443 3468999999999 479999875431 11 122222 122 3555 33 3667 69999
Q ss_pred eEEEeccCccccCCceeecccccccCCcEEEEEe-C----CEEEEEECCCCcEeEEEecc
Q 002016 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-K----GCLHAVSSIDGEILWTRDFA 173 (981)
Q Consensus 119 lWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~-~----g~l~aLd~~tG~~~W~~~~~ 173 (981)
+|...+.-+ +...++.-.+...+-.|+... + ......|++||+++|+....
T Consensus 359 L~st~~gHG----Da~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~~~ 414 (620)
T 2zuy_A 359 LYSTGLGHG----DAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHAG 414 (620)
T ss_dssp EEECSCCCC----SCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCS
T ss_pred EeecCCCCC----ceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEecCc
Confidence 999876321 223333222222222333332 2 24566799999999998653
No 292
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=64.61 E-value=1.2e+02 Score=35.80 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=41.7
Q ss_pred cCCCEEEEEcC---------CCEEEEEECCCCccceEEEcCCCcceeeee-eeecCeEEEEEccCCEEEEEeCCCCcEe
Q 002016 51 TGRKRVVVSTE---------ENVIASLDLRHGEIFWRHVLGINDVVDGID-IALGKYVITLSSDGSTLRAWNLPDGQMV 119 (981)
Q Consensus 51 ~~~~~VyvaT~---------~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~-~~~~~~vV~Vs~~g~~V~A~da~tG~ll 119 (981)
.+++.|++++. ++.|...|.++|+.+....+... +.... -+.|..+++++ ++.|+.||..+|+..
T Consensus 69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~--~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 69 PDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRP--IQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPF 143 (719)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSS--BCCEEECSSTTCEEEEE--TTEEEEESSTTSCCE
T ss_pred CCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcc--cccceECCCCCEEEEEE--CCeEEEEeCCCCCcE
Confidence 35666777765 68999999999987533334322 22111 12455566643 459999999999864
No 293
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=64.54 E-value=1.8e+02 Score=32.40 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=63.7
Q ss_pred CCCEEE----EEcCCCEEEEEECCCC--------ccceEEEcCC--Ccceeeeeee-ecCeEEEEEccCCEEEEEeCCCC
Q 002016 52 GRKRVV----VSTEENVIASLDLRHG--------EIFWRHVLGI--NDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDG 116 (981)
Q Consensus 52 ~~~~Vy----vaT~~g~L~ALd~~tG--------~ivWR~~l~~--~~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG 116 (981)
++..++ .++.++.|.-.|.+++ +.+.....-. ...+..+... .++..++.++.++.|+.||..+|
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 355666 4567899999998877 4444444422 1223333211 22445555556679999999999
Q ss_pred cEeEEEeccCccccCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEe
Q 002016 117 QMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 117 ~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~ 171 (981)
............. ....+-| .+..+++. .+|.+..+|.. |+..=+..
T Consensus 183 ~~~~~~~~~~~~v-~~v~wsp------dg~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 183 VKVCATLPSTVAV-TSVCWSP------KGKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp EEEEEEECGGGCE-EEEEECT------TSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred cceeeccCCCCce-eEEEEcC------CCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 7765544322211 1111111 23445554 58999999987 76654443
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.29 E-value=66 Score=38.86 Aligned_cols=188 Identities=14% Similarity=0.032 Sum_probs=84.7
Q ss_pred CCEEEEEcC-CCEEEEEECCC----CccceEEEcCCC-cceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEecc
Q 002016 53 RKRVVVSTE-ENVIASLDLRH----GEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~t----G~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~ 125 (981)
+++||+++. .+.|..+++.+ +... ..+... ....++.+...++.+|++. ..+.|+.+|...+....-. .
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~--~ 492 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF--R 492 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEEC--C
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceE--EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEE--e
Confidence 567888864 46788888764 1110 011111 0112331111234445443 3467888887544332211 1
Q ss_pred CccccCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCce
Q 002016 126 GSKHSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQ 201 (981)
Q Consensus 126 ~~~~s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~ 201 (981)
.. +..+..++ .+ .++.+|+.. .++|++++.. |..+=..... .-..|..+.....++.+|++-....
T Consensus 493 ~~-~~~P~gia-----vDp~~g~ly~td~~~~~~I~~~~~d-G~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~-- 562 (699)
T 1n7d_A 493 EQ-GSKPRAIV-----VDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLH-- 562 (699)
T ss_dssp CS-SCCCCCEE-----CCSSSSCCEECCCSSSCCEEBCCSS-SCCCCEESCS-SCSSCCCEEECTTTCCEEEEETTTT--
T ss_pred CC-CCCcceEE-----EccCCCcEEEcccCCCCeEEEEeCC-CCCeeEEEeC-CCCCccEEEEeccCCEEEEEecCCC--
Confidence 11 10111111 11 234566642 2677776643 3211111000 0011223322235678888654332
Q ss_pred eEEEEEECCCCceeeeeeeeccCCccC-ceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 202 FHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 202 ~~v~aLd~~tG~~lw~~~v~~p~~~~~-~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+|..+|...+.+. .. +..+..+.. .-+.+.++.++|+|..++.+.+++..+|+
T Consensus 563 -~I~~~d~dG~~~~-~~-~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 563 -SISSIDVNGGNRK-TI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp -EEEEECSSSSCCE-EE-CCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEE
T ss_pred -eEEEEccCCCceE-EE-EecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCC
Confidence 5777887532221 11 111111111 11123456888999888899999877776
No 295
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.70 E-value=1.2e+02 Score=36.31 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=79.0
Q ss_pred CCCEEEEEcCCCEEEEEECCCC-----c-cc--eEEEcCCC---cceeeeeeeecCeEEEE--EccCCEEEEEeCCCCcE
Q 002016 52 GRKRVVVSTEENVIASLDLRHG-----E-IF--WRHVLGIN---DVVDGIDIALGKYVITL--SSDGSTLRAWNLPDGQM 118 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG-----~-iv--WR~~l~~~---~~i~~l~~~~~~~vV~V--s~~g~~V~A~da~tG~l 118 (981)
.+++++++|..+-|..+|+++. . .. ++...... ..+..+ ....++.+.+ ++. +.+..+|+.+++.
T Consensus 428 ~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i-~~d~~g~lWi~~~t~-~Gl~~~d~~~~~~ 505 (758)
T 3ott_A 428 TAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQI-IPDNEGNVWVLLYNN-KGIDKINPRTREV 505 (758)
T ss_dssp TTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEE-EECTTSCEEEEETTC-SSEEEEETTTTEE
T ss_pred CCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeE-EEcCCCCEEEEccCC-CCcEEEeCCCCce
Confidence 3678999998777899997641 1 11 22211111 012223 2234455555 444 3488999998875
Q ss_pred eEEEeccCcccc-CC-ceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEe
Q 002016 119 VWESFLRGSKHS-KP-LLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGY 196 (981)
Q Consensus 119 lWe~~~~~~~~s-~~-~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~ 196 (981)
.-- . ...... .. ..+. .+.++.+.+.+.+.|.++|+++++...-....-+...+..+. ...+.+++.+.
T Consensus 506 ~~~-~-~~~~~~~~~~~~i~-----~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~--~~~g~lWi~t~ 576 (758)
T 3ott_A 506 TKL-F-ADELTGEKSPNYLL-----CDEDGLLWVGFHGGVMRINPKDESQQSISFGSFSNNEILSMT--CVKNSIWVSTT 576 (758)
T ss_dssp EEE-C-TTTSCGGGCEEEEE-----ECTTSCEEEEETTEEEEECC--CCCCBCCCCC---CCEEEEE--EETTEEEEEES
T ss_pred EEe-c-CCCcCCCcccceEE-----ECCCCCEEEEecCceEEEecCCCceEEecccCCCccceEEEE--ECCCCEEEECC
Confidence 521 1 111100 00 0111 245667888777789999998886432111111111233333 25788998765
Q ss_pred cCCceeEEEEEECCCCcee
Q 002016 197 AGSSQFHAYQINAMNGELL 215 (981)
Q Consensus 197 ~g~~~~~v~aLd~~tG~~l 215 (981)
.| +..+|+++++..
T Consensus 577 ~G-----l~~~~~~~~~~~ 590 (758)
T 3ott_A 577 NG-----LWIIDRKTMDAR 590 (758)
T ss_dssp SC-----EEEEETTTCCEE
T ss_pred CC-----eEEEcCCCceeE
Confidence 55 899999988754
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=61.38 E-value=2.4e+02 Score=32.66 Aligned_cols=152 Identities=12% Similarity=0.133 Sum_probs=73.7
Q ss_pred CCEEEEEcCC-CEEEEEECCCCccceEEEcCCCc--ceeeeee-------eecCeEEEEEccCC-------EEEEEeCCC
Q 002016 53 RKRVVVSTEE-NVIASLDLRHGEIFWRHVLGIND--VVDGIDI-------ALGKYVITLSSDGS-------TLRAWNLPD 115 (981)
Q Consensus 53 ~~~VyvaT~~-g~L~ALd~~tG~ivWR~~l~~~~--~i~~l~~-------~~~~~vV~Vs~~g~-------~V~A~da~t 115 (981)
++.||++.+. +.|..+|+++|.+.=-....... ....+.. ...++.++++...+ .+..++...
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~ 230 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA 230 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC
Confidence 4668888775 67888998888764222111100 1122212 22445566654432 377776554
Q ss_pred -CcEeE----EEeccCccccCCceeecccccccCCcEEEEE--eCCEEEEEECC-------CCcEeEE------------
Q 002016 116 -GQMVW----ESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSI-------DGEILWT------------ 169 (981)
Q Consensus 116 -G~llW----e~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~-------tG~~~W~------------ 169 (981)
|...+ + .+.....+..+.+- ..++.+|+. .++.|+++|.+ +|.. |+
T Consensus 231 ~G~~~~~~~~~-~v~~~~~p~giavd------p~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~-~tp~~~~~~g~~~~ 302 (496)
T 3kya_A 231 DGTFDDRSDIQ-LIAAYKQCNGATIH------PINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS-WDPIVKNNPNTFKQ 302 (496)
T ss_dssp TSCCSTTSCEE-EEEEESCCCCEEEC------TTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC-CCCBGGGCTTTEEE
T ss_pred CCceeecccce-eeccCCCceEEEEc------CCCCeEEEEECCCCEEEEEecccccccccCcee-ecccccccccccce
Confidence 55432 1 11110100111111 124567774 48899999998 6653 31
Q ss_pred -EeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCce
Q 002016 170 -RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (981)
Q Consensus 170 -~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~ 214 (981)
+..+... .+..+.....++.+|+.- .+...++.+.+|..+|..
T Consensus 303 l~~~~~~~-~p~~ia~~p~G~~lYvaD-~~~h~I~kid~dg~~~~~ 346 (496)
T 3kya_A 303 LFTIADPS-WEFQIFIHPTGKYAYFGV-INNHYFMRSDYDEIKKEF 346 (496)
T ss_dssp EEECSSSS-CCEEEEECTTSSEEEEEE-TTTTEEEEEEEETTTTEE
T ss_pred eEecCCCC-CceEEEEcCCCCEEEEEe-CCCCEEEEEecCCCccee
Confidence 1222211 134443233445578754 343334444466666643
No 297
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=59.31 E-value=2.1e+02 Score=31.52 Aligned_cols=190 Identities=13% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCEEEEEcC-CCEEEEEECCCCc--cceEEEcCCC-cceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGE--IFWRHVLGIN-DVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~--ivWR~~l~~~-~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
+++||+++. .+.|..+++..+. ......+... ....++.+- .++.+++.-...+.|+..|++.+...-... .
T Consensus 123 ~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~--~- 199 (400)
T 3p5b_L 123 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR--E- 199 (400)
T ss_dssp TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE--C-
T ss_pred cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe--C-
Confidence 677888864 5678888875422 1122222211 112244111 133344433344678888775433221111 1
Q ss_pred cccCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 128 KHSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
.+..+..++ .+ .++.+|+.. .+++.+++.. |..+-..-.. .-..|..+......+.+|++-.... +
T Consensus 200 ~~~~P~~ia-----vdp~~g~ly~td~~~~~~I~~~~~d-G~~~~~~~~~-~l~~P~glavd~~~~~lY~aD~~~~---~ 269 (400)
T 3p5b_L 200 NGSKPRAIV-----VDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLH---S 269 (400)
T ss_dssp SSCCEEEEE-----EETTTTEEEEEECSSSCCEEEEETT-SCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTTT---E
T ss_pred CCCCcceEE-----EecccCeEEEEeCCCCCEEEEEeCC-CCccEEEEEC-CCCceEEEEEEeCCCEEEEEECCCC---E
Confidence 110111111 11 245566643 3567777654 3322111111 1012334432235788888654332 5
Q ss_pred EEEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 204 AYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 204 v~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+..+|.. |....... ..+..+... -+-+.++.++|+|..++.+...+..+|+
T Consensus 270 I~~~d~d-G~~~~~~~-~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 270 ISSIDVN-GGNRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEEEETT-SCCCEEEE-ECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred EEEEeCC-CCccEEEE-eCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 7888874 44332221 111122221 1223567888899888888888866665
No 298
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=58.52 E-value=64 Score=38.31 Aligned_cols=142 Identities=11% Similarity=0.115 Sum_probs=72.6
Q ss_pred EEEEECCCCccceEEEcCCCcceeeeeeee--cCeEEEEEccCC-----------EEEEEeCCCCcEeEEEeccCccccC
Q 002016 65 IASLDLRHGEIFWRHVLGINDVVDGIDIAL--GKYVITLSSDGS-----------TLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 65 L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~--~~~vV~Vs~~g~-----------~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
+.++|+.+| .|+...+-+...... +.. ++.++++||.+. .+..||+.+++ |+.....+.. .
T Consensus 168 ~~~~dp~~~--~W~~~~~~P~~~~~~-av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~~~~~~-~ 241 (656)
T 1k3i_A 168 YTAPQPGLG--RWGPTIDLPIVPAAA-AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRTVTVTK-H 241 (656)
T ss_dssp CCCCCTTSC--EEEEEEECSSCCSEE-EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCEEEECS-C
T ss_pred cccCCCCCC--eeeeeccCCCCceeE-EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCcccCCC-C
Confidence 556777777 488655433211112 123 566666665321 68889998885 6432111000 0
Q ss_pred CceeecccccccCCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEec--CC-ceeEEE
Q 002016 132 PLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYA--GS-SQFHAY 205 (981)
Q Consensus 132 ~~~~v~~~~~~~~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~--g~-~~~~v~ 205 (981)
.. .. .......++.+++.+ +..+..+|..++ .|+.-.+.+.-......-...++.+|++|-. ++ ..-.+.
T Consensus 242 ~~-~~-~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 242 DM-FC-PGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp CC-SS-CEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred CC-cc-ccccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccce
Confidence 00 00 000011245566653 457999999877 6886443221100111112238899988752 11 112477
Q ss_pred EEECCCCceeeee
Q 002016 206 QINAMNGELLNHE 218 (981)
Q Consensus 206 aLd~~tG~~lw~~ 218 (981)
.+|+.+++ |+.
T Consensus 318 ~yd~~t~~--W~~ 328 (656)
T 1k3i_A 318 VYSPSSKT--WTS 328 (656)
T ss_dssp EEETTTTE--EEE
T ss_pred EeCCCCCc--cee
Confidence 88998875 776
No 299
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=57.02 E-value=1.9e+02 Score=30.28 Aligned_cols=65 Identities=8% Similarity=0.177 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCCEEEEEECCCCc---cceE--EEcCCC-cceeeeeeeecCeEEEEEccCCEEEEEeCCCC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGE---IFWR--HVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDG 116 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~---ivWR--~~l~~~-~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG 116 (981)
++..+++++.++.|.-.|.+++. ..++ ..+... ..+..+....++..++.++.++.|+.||..++
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 45678889999999888875432 1122 122211 22333321223444544556779999999544
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=56.33 E-value=2.4e+02 Score=31.07 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=39.5
Q ss_pred CCEEEEEc-------------CCCEEEEEECCC--CccceEEEcCC--C--c--ceeeeeeee---cCeEEEEEcc---C
Q 002016 53 RKRVVVST-------------EENVIASLDLRH--GEIFWRHVLGI--N--D--VVDGIDIAL---GKYVITLSSD---G 105 (981)
Q Consensus 53 ~~~VyvaT-------------~~g~L~ALd~~t--G~ivWR~~l~~--~--~--~i~~l~~~~---~~~vV~Vs~~---g 105 (981)
++.+|+++ ..|.|+.+|+++ ++.. +..+.. . . ...|+.... +...++|... +
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~ 138 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSS 138 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTC
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCC
Confidence 67899997 689999999984 4321 222222 1 1 111332222 2224444422 2
Q ss_pred C--EEEEEeCCCCcEeEEEeccCc
Q 002016 106 S--TLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 106 ~--~V~A~da~tG~llWe~~~~~~ 127 (981)
+ .+.-+|..++...+-....+.
T Consensus 139 s~ielf~~d~~~~~~~~~~~~~g~ 162 (355)
T 3sre_A 139 STVEVFKFQEEEKSLLHLKTIRHK 162 (355)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCT
T ss_pred CeEEEEEEECCCCEEEEEeccccC
Confidence 2 366677777777776665543
No 301
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=54.83 E-value=2.6e+02 Score=31.11 Aligned_cols=109 Identities=13% Similarity=0.034 Sum_probs=60.1
Q ss_pred cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEeccC
Q 002016 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAA 174 (981)
Q Consensus 95 ~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~~~ 174 (981)
++.+++++ .++.|+.||..+-...+......... . .+.+. ..+.+++..+|.|+.+|.++|... ...
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v-~--~i~~~-----~p~~av~~~dG~L~v~dl~~~~~~---~~~- 162 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPV-F--QLKNV-----NNTLVILNSVNDLSALDLRTKSTK---QLA- 162 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCE-E--EEEEC-----SSEEEEEETTSEEEEEETTTCCEE---EEE-
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecce-e--eEEec-----CCCEEEEECCCCEEEEEccCCccc---ccc-
Confidence 66677777 56799999988777666554332221 1 11111 122333347999999999998763 111
Q ss_pred cceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeeeeeeccC
Q 002016 175 ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSG 224 (981)
Q Consensus 175 ~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~~v~~p~ 224 (981)
.. .+++ ...+...+ +|...+ .+..+++.+++.--+..+..|.
T Consensus 163 ~~---Vs~v-~WSpkG~~-vg~~dg---~i~~~~~~~~~~~~k~~I~~Pp 204 (388)
T 1xip_A 163 QN---VTSF-DVTNSQLA-VLLKDR---SFQSFAWRNGEMEKQFEFSLPS 204 (388)
T ss_dssp ES---EEEE-EECSSEEE-EEETTS---CEEEEEEETTEEEEEEEECCCH
T ss_pred CC---ceEE-EEcCCceE-EEEcCC---cEEEEcCCCccccccceecCCc
Confidence 11 1222 22344443 455443 3677787777753344454443
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=52.37 E-value=2.2e+02 Score=31.39 Aligned_cols=100 Identities=11% Similarity=0.145 Sum_probs=60.4
Q ss_pred EEEEEcCCCEEEEEEC-------CCCccceEEEcCCCcceeeeeeee-cCeEEEEEccCCEEEEEeCC-----CCcEeEE
Q 002016 55 RVVVSTEENVIASLDL-------RHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLP-----DGQMVWE 121 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~-------~tG~ivWR~~l~~~~~i~~l~~~~-~~~vV~Vs~~g~~V~A~da~-----tG~llWe 121 (981)
.+|+..++|.+.-+.. .+++++.+..+... ..+. ++. ..+.+|++-.+..|+.+|+. +++++..
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq--~Egc-vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~ 221 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ--TEGM-AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDR 221 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC--EEEE-EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEE
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC--cceE-EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEE
Confidence 4888888898877443 35577888777654 4455 233 45788888877679999966 5777765
Q ss_pred EeccCcccc---CCceeecccccccCCcEEEEEe--CCEEEEEECC
Q 002016 122 SFLRGSKHS---KPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI 162 (981)
Q Consensus 122 ~~~~~~~~s---~~~~~v~~~~~~~~~~~V~V~~--~g~l~aLd~~ 162 (981)
... +.+. .++.+.+. .++.+++++.+ ++.+..+|.+
T Consensus 222 ~~~--g~l~aDvEGLai~~~---~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 222 ADG--RHLTRDIEGLTIYYA---ADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp BSS--SSBCSCEEEEEEEEC---GGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecC--CccccCcceEEEEec---CCCCEEEEEEcCCCCEEEEEECC
Confidence 532 2221 11222211 11234666664 6677777764
No 303
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=51.46 E-value=2.6e+02 Score=30.10 Aligned_cols=187 Identities=16% Similarity=0.071 Sum_probs=86.7
Q ss_pred CCCEEEEEc-CCCEEEEEECCCCccceEEEcCCC-cceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT-~~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
.+++||+++ ..+.|..+++..+.. +..+..+ ....++.+.-.++.++++ ...+.+...+.. |+..-. -... .
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~-l~~~-~ 157 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSNV--EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKV-LLWQ-S 157 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEE-EECT-T
T ss_pred cccEEEEEeccCCceEEEecCCCCc--eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceEE-EEeC-C
Confidence 356777775 456788888765542 2222211 111244111123444444 334678888864 433211 1111 1
Q ss_pred ccCCceeeccccccc-CCcEEEEEe--C-CEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 129 HSKPLLLVPTNLKVD-KDSLILVSS--K-GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~-~~~~V~V~~--~-g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
+..+..++ .+ .++.+|+.. + +++++++.. |..+-..-. ..-..|..+.....++.+|++-...+ ++
T Consensus 158 l~~P~~ia-----vdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~---~I 227 (349)
T 3v64_C 158 LEKPRAIA-----LHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHH---VI 227 (349)
T ss_dssp CSCEEEEE-----EETTTTEEEEEECSSSCEEEEEETT-SCSCEESCC-SSCSCEEEEEEETTTTEEEEEETTTT---EE
T ss_pred CCCcceEE-----EecCcCeEEEeccCCCCEEEEEeCC-CCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCCC---EE
Confidence 10111111 12 245666652 3 778888754 332211111 11112334432235788998654333 57
Q ss_pred EEEECCCCceeeeeeeeccCCccCc-eEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 205 YQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p~~~~~~-~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|.. |...... ...++... -+.+.++.++|+|..++.+...+-.+|+
T Consensus 228 ~~~~~d-G~~~~~~---~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 228 ERANLD-GSHRKAV---ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEETT-SCSCEEE---ECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeCC-CCceEEE---EeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 888865 4322111 11112111 1112566788888877887777755555
No 304
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=50.35 E-value=2.3e+02 Score=29.12 Aligned_cols=65 Identities=8% Similarity=0.062 Sum_probs=39.8
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCC-Ccceeeeeee-e-cCeEEEEEccCCEEEEEeCCCCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIA-L-GKYVITLSSDGSTLRAWNLPDGQ 117 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~-~~~i~~l~~~-~-~~~vV~Vs~~g~~V~A~da~tG~ 117 (981)
+..++.++.+|.|.--|.++|+..=...+.. ...+..+... . .+..++.++.++.++.||..++.
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 5678999999999999999885211112221 1123322111 1 13455556667899999998774
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=50.34 E-value=2.7e+02 Score=30.01 Aligned_cols=20 Identities=10% Similarity=0.232 Sum_probs=17.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGE 74 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ 74 (981)
++++||+...|.|..++ +|+
T Consensus 41 dG~l~V~e~~g~I~~i~--~g~ 60 (352)
T 2ism_A 41 DGGMLIAERPGRIRLFR--EGR 60 (352)
T ss_dssp TSCEEEEETTTEEEEEE--TTE
T ss_pred CCeEEEEeCCCeEEEEE--CCC
Confidence 66799999999999999 675
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=48.86 E-value=3.9e+02 Score=31.46 Aligned_cols=185 Identities=12% Similarity=0.020 Sum_probs=87.6
Q ss_pred CCCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeee-cCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCc
Q 002016 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIAL-GKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGS 127 (981)
Q Consensus 52 ~~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~-~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~ 127 (981)
.+++||+++- .+.|..+++. |...+...+..+ ....++ +.. .++.++++ ...+.|...|.. |+..=. +...
T Consensus 50 ~~~~ly~sD~~~~~I~r~~~~-g~~~~~~v~~~~~~~P~Gl-AvD~~~~~ly~~d~~~~~I~v~~~d-G~~~~~--l~~~ 124 (619)
T 3s94_A 50 SHGLIYWSDVSEEAIKRTEFN-KTESVQNVVVSGLLSPDGL-ACDWLGEKLYWTDSETNRIEVSNLD-GSLRKV--LFWQ 124 (619)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEE-EEETTTTEEEEEETTTTEEEEEETT-SCSCEE--EECS
T ss_pred CCCEEEEEECCCCeEEEEEcc-CCCceEEEEeCCCCCcCeE-EEEecCCEEEEEeCCCCEEEEEECC-CCCEEE--EEeC
Confidence 4678998875 5788888875 443344444433 223355 222 13444444 345688888874 532211 1111
Q ss_pred cccCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeE
Q 002016 128 KHSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (981)
Q Consensus 128 ~~s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~ 203 (981)
.+..+..++ .+ .++.+|+.. .+++.+.+. +|..+=..-.... ..|..+......+.+|++-...+ +
T Consensus 125 ~l~~P~~Ia-----vdp~~g~ly~tD~g~~~~I~r~~~-dG~~~~~l~~~~~-~~P~Glald~~~~~LY~aD~~~~---~ 194 (619)
T 3s94_A 125 ELDQPRAIA-----LDPSSGFMYWTDWGEVPKIERAGM-DGSSRFIIINSEI-YWPNGLTLDYEEQKLYWADAKLN---F 194 (619)
T ss_dssp SCSCCCCEE-----EETTTTEEEEEECSSSCEEEEEET-TSCSCEEEECSSC-SSEEEEEEETTTTEEEEEETTTC---C
T ss_pred CCCCCceEE-----EecCCCeEEEeccCCCCEEEEEEC-CCCceEEEEeCCC-CCCcEEEEEccCCEEEEEeCCCC---e
Confidence 111111111 11 234566643 356666654 3332211111111 11333432234678888643332 4
Q ss_pred EEEEECCCCceeeee---eeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 204 AYQINAMNGELLNHE---TAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 204 v~aLd~~tG~~lw~~---~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
+..+|.. |.-.... .+.-|.+ +-+.++.++|+|..++.+.+++..+|+
T Consensus 195 I~~~~~d-G~~~~~~~~~~~~~P~g-----i~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 195 IHKSNLD-GTNRQAVVKGSLPHPFA-----LTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEEESSS-CCEEC---------CCC-----EEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred EEEecCC-CCccEEEEeCCCCCceE-----EEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 7777764 4333222 1111221 123556888999888899999987776
No 307
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=45.64 E-value=3.3e+02 Score=29.68 Aligned_cols=183 Identities=9% Similarity=0.001 Sum_probs=80.7
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
...++++.. +.|..+++..++.. ..+.......++.....++.++++ ..++.|+.+++..+... .-+..+.. .
T Consensus 87 ~~~l~~~~~-~~I~~i~~~~~~~~--~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~-~ 160 (386)
T 3v65_B 87 EPVLLFANR-IDIRQVLPHRSEYT--LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLE-S 160 (386)
T ss_dssp CCEEEEECB-SCEEEECTTSCCCE--EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE--EEECSSCS-C
T ss_pred cceeEeecC-ccceeeccCCCcEE--EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE--EEEeCCCC-C
Confidence 344665554 56888888766542 222222112233111134455554 34578888888765422 11111110 0
Q ss_pred Cceeeccccccc-CCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 132 PLLLVPTNLKVD-KDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 132 ~~~~v~~~~~~~-~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
+..+. .+ .++.+|+. ..+++..++...+...-.... .-..|..+.....++.+|+..... ..++..++
T Consensus 161 p~gla-----vd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~--~l~~P~giavdp~~g~ly~td~~~--~~~I~r~~ 231 (386)
T 3v65_B 161 PGGLA-----VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ--SLEKPRAIALHPMEGTIYWTDWGN--TPRIEASS 231 (386)
T ss_dssp CCCEE-----EETTTTEEEEEETTTTEEEECBTTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEECSS--SCEEEEEE
T ss_pred ccEEE-----EEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC--CCCCCcEEEEEcCCCeEEEeccCC--CCEEEEEe
Confidence 11111 11 23455554 256777776553332221111 111244443222567888754432 12577777
Q ss_pred CCCCceeeeeeeeccCCccC--ceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 209 AMNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~--~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
+. |...... . ..++.. .+.+- .++.++|+|..++.+.+.++.
T Consensus 232 ~d-G~~~~~~--~-~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 232 MD-GSGRRII--A-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp TT-SCSCEEE--E-CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CC-CCCcEEE--E-ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 64 4322111 0 111111 11111 345666667666666666654
No 308
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=43.27 E-value=3.8e+02 Score=29.67 Aligned_cols=109 Identities=13% Similarity=0.044 Sum_probs=55.8
Q ss_pred cCeEEEE---E-ccCCEEEEEeCCCC--------cEeEEEeccC---ccccCCceeecccccccCCcEEEEE-eCCEEEE
Q 002016 95 GKYVITL---S-SDGSTLRAWNLPDG--------QMVWESFLRG---SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHA 158 (981)
Q Consensus 95 ~~~vV~V---s-~~g~~V~A~da~tG--------~llWe~~~~~---~~~s~~~~~v~~~~~~~~~~~V~V~-~~g~l~a 158 (981)
++..+++ + +.++.|+.||..++ +.+....... ... ..+.+-| ..+..++.. .||.|..
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V-~~v~~~p-----~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV-IDMKWNP-----TVPSMVAVCLADGSIAV 176 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE-EEEEECS-----SCTTEEEEEETTSCEEE
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCce-EEEEECC-----CCCCEEEEEECCCeEEE
Confidence 3445553 3 34679999998876 4444444321 111 1111111 112334433 5899999
Q ss_pred EECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceee
Q 002016 159 VSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLN 216 (981)
Q Consensus 159 Ld~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw 216 (981)
.|..+|............ +..+..+..+..+++.+.+| .+..+|.+ |+..-
T Consensus 177 wD~~~~~~~~~~~~~~~~--v~~v~wspdg~~lasgs~dg----~v~iwd~~-~~~~~ 227 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVA--VTSVCWSPKGKQLAVGKQNG----TVVQYLPT-LQEKK 227 (434)
T ss_dssp EEESSSEEEEEEECGGGC--EEEEEECTTSSCEEEEETTS----CEEEECTT-CCEEE
T ss_pred EEcCCCcceeeccCCCCc--eeEEEEcCCCCEEEEEcCCC----cEEEEccC-Ccccc
Confidence 999998665544321111 22232233444555444334 37778887 65543
No 309
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=42.14 E-value=3.4e+02 Score=28.82 Aligned_cols=182 Identities=10% Similarity=-0.001 Sum_probs=77.9
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcE-eEEEeccCccccCC
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQM-VWESFLRGSKHSKP 132 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~l-lWe~~~~~~~~s~~ 132 (981)
.++++. .+.|..+|+..+...-...+..-....++.....++.++++ ..++.|+.+++..+.. .+..... .. .+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~--l~-~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG--LL-SP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC--CS-CC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC--CC-Cc
Confidence 455555 45688888866542222222111001112111123344444 3456788888765532 1211110 00 01
Q ss_pred ceeeccccccc-CCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEEC
Q 002016 133 LLLVPTNLKVD-KDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (981)
Q Consensus 133 ~~~v~~~~~~~-~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~ 209 (981)
..+. .+ .++.+|+. ..+++..++........-... ....|..+..-...+.+|+..... ..++..+++
T Consensus 82 ~gla-----vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~--~~~~P~giavdp~~g~ly~td~~~--~~~I~r~~~ 152 (318)
T 3sov_A 82 DGLA-----CDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSSGFMYWTDWGE--VPKIERAGM 152 (318)
T ss_dssp CEEE-----EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEEGGGTEEEEEECSS--SCEEEEEET
T ss_pred cEEE-----EEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC--CCCCccEEEEeCCCCEEEEEecCC--CCEEEEEEc
Confidence 1111 11 24455554 356777777643332222211 111233433122467888754321 125777776
Q ss_pred CCCceeeee---eeeccCCccCceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 210 MNGELLNHE---TAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 210 ~tG~~lw~~---~v~~p~~~~~~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
. |...... .+..|.+ +.+- .++.++|+|..++.+.+.++.
T Consensus 153 d-G~~~~~~~~~~l~~Png----lavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 153 D-GSSRFIIINSEIYWPNG----LTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp T-SCSCEEEECSSCSCEEE----EEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCeEEEEECCCCCccE----EEEeccCCEEEEEECCCCEEEEEcCC
Confidence 4 4322111 1111211 1111 245666777666666666654
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.11 E-value=71 Score=38.59 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=35.7
Q ss_pred CcEEEEE--eCCEEEEEECCCCcEeEEEeccCcce-eeeEEEEeecCCeEEEEEecCCceeEEEEEECCCCceeeee
Q 002016 145 DSLILVS--SKGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (981)
Q Consensus 145 ~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd~~tG~~lw~~ 218 (981)
++.+|+. ..++|.+++.. |..+-........+ .|..+ ....+.+|++...++ +|..+|..+|+.+-..
T Consensus 551 ~~~LY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~~~~P~gl--avd~~~lywtd~~~~---~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSL--AVFEDKVFWTDIINE---AIFSANRLTGSDVNLL 621 (699)
T ss_dssp TCCEEEEETTTTEEEEECSS-SSCCEEECCCSSSCSSCCCC--EEETTEEEEECSTTT---CEEEEETTTEEEEECC
T ss_pred CCEEEEEecCCCeEEEEccC-CCceEEEEecCCcCCCceEe--EEECCEEEEEeCCCC---eEEEEEccCCCceEEe
Confidence 3456665 36678888764 33222221111111 12233 235668887664433 4888888888766443
No 311
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=36.65 E-value=3.7e+02 Score=27.70 Aligned_cols=64 Identities=8% Similarity=0.072 Sum_probs=36.0
Q ss_pred CCCEEEEEcCC-----CEEEEEECCCCccceEEEcCCCcceeeeeee-ecCeEEEEEcc---------------------
Q 002016 52 GRKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSD--------------------- 104 (981)
Q Consensus 52 ~~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~-~~~~vV~Vs~~--------------------- 104 (981)
+++.|++++.+ ..|+.+|..+|+..--... +. +..+.-. .++.+++.+..
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~ 145 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLG 145 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--SE-EEEEEECTTSSEEEEEEECCCC---------CCCC-----
T ss_pred CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcc
Confidence 45566665532 3588899888875322222 21 2222112 34445554422
Q ss_pred -----CCEEEEEeCCCCcE
Q 002016 105 -----GSTLRAWNLPDGQM 118 (981)
Q Consensus 105 -----g~~V~A~da~tG~l 118 (981)
...++.||..+|+.
T Consensus 146 ~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 146 FFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp ----CEEEEEEEETTTTEE
T ss_pred cccCccceEEEEECCCCeE
Confidence 25799999999987
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=36.20 E-value=4.4e+02 Score=28.40 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=18.5
Q ss_pred CCEEEEEcCCCEEEEEECCCCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGE 74 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ 74 (981)
++++||+...|.|..+| .+|+
T Consensus 39 dG~l~V~e~~g~I~~~d-~~G~ 59 (354)
T 3a9g_A 39 GGRYLVTERPGRLVLIS-PSGK 59 (354)
T ss_dssp TTEEEEEETTTEEEEEC-SSCE
T ss_pred CCeEEEEeCCCEEEEEe-CCCc
Confidence 67899999999999998 5786
No 313
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=34.89 E-value=7e+02 Score=30.37 Aligned_cols=183 Identities=11% Similarity=0.077 Sum_probs=75.0
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcE--eEEEeccCccccC
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQM--VWESFLRGSKHSK 131 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~l--lWe~~~~~~~~s~ 131 (981)
.++++... .|..++...++. ...+.......++.....++.+|++. ..+.|+.++...... .++.-+..... .
T Consensus 397 ~Ll~an~~-~Ir~i~l~~~~~--~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~-~ 472 (791)
T 3m0c_C 397 YLFFTNRH-EVRKMTLDRSEY--TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-A 472 (791)
T ss_dssp EEEEECBS-SEEEECTTSCCC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-C
T ss_pred cccccccc-ceeEeeccCCcc--eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC-C
Confidence 45555554 467777765543 32222221122331112244555543 346787777653211 12222221110 1
Q ss_pred Cceeeccccccc-CCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 132 PLLLVPTNLKVD-KDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 132 ~~~~v~~~~~~~-~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
+..+. .+ .++.+|+. ..++|..++...+...--... ....|..+..-...+.+|+... |. .-++..++
T Consensus 473 P~GLA-----vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~--~l~~P~gIaVDp~~g~LYwtD~-g~-~~~I~~~~ 543 (791)
T 3m0c_C 473 PDGLA-----VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDW-GT-PAKIKKGG 543 (791)
T ss_dssp CCEEE-----EETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEEC-SS-SCEEEEEE
T ss_pred cceee-----eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC--CCCCcceEEEecCCCCEEEecC-CC-CCeEEEEe
Confidence 11111 11 23356664 366777777653332111111 1112444432224577887543 32 12466666
Q ss_pred CCCCceeeeeeeeccCCccCc--eEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 209 AMNGELLNHETAAFSGGFVGD--VALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~~--~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
+. |..+-.. ...++... +.+- .++.|+|+|...+.+.+.++.
T Consensus 544 ~d-G~~~~~l---v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 544 LN-GVDIYSL---VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp TT-SCCEEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cC-CCceEEE---EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 53 4322111 11112111 1111 245666777666666666664
No 314
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=33.48 E-value=5.1e+02 Score=28.34 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=30.2
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCC
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPD 115 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~t 115 (981)
.++++. .+.|..+|+..++..+. +.......++.....++.++++ ..++.|+.++...
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~--~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g 143 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 143 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred eeEEec-cceeEEEccCCcceeEe--ccccCcceEEeeeeccCceEEEecCCCeEEEEEccc
Confidence 455555 46789999877654433 3222222233111234555554 3456888888754
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=33.09 E-value=88 Score=32.60 Aligned_cols=96 Identities=14% Similarity=0.016 Sum_probs=49.9
Q ss_pred CCEEEEEcCCCEEEEEEC-CCCccceEEEcCCCc------ceeeeeeeecCeEEEEEccCCEEEEEeCC-CCcEeEEEec
Q 002016 53 RKRVVVSTEENVIASLDL-RHGEIFWRHVLGIND------VVDGIDIALGKYVITLSSDGSTLRAWNLP-DGQMVWESFL 124 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~-~tG~ivWR~~l~~~~------~i~~l~~~~~~~vV~Vs~~g~~V~A~da~-tG~llWe~~~ 124 (981)
++.||+. .+|.|+..++ .++...|.-. .+.. .+..+ ....++.++++++ ++|+-+++. +|.--|-..
T Consensus 51 ~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~-~fD~~G~LYav~d-G~iyr~~pP~~~~~~Wl~~- 125 (236)
T 1tl2_A 51 GGELYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFL-FFDPNGYLYAVSK-DKLYKASPPQSDTDNWIAR- 125 (236)
T ss_dssp TSCEEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEE-EECTTSCEEEEET-TEEEEESCCCSTTCCHHHH-
T ss_pred CccEEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEE-EECCCCCEEEeCC-CEEEEeCCCcCCCCceecc-
Confidence 6779988 8888999998 4566777643 2110 01111 1234444544443 567666653 344455333
Q ss_pred cCccccCCceeecccccccCCcE-EEEE-eCCEEEEEECCCCcE
Q 002016 125 RGSKHSKPLLLVPTNLKVDKDSL-ILVS-SKGCLHAVSSIDGEI 166 (981)
Q Consensus 125 ~~~~~s~~~~~v~~~~~~~~~~~-V~V~-~~g~l~aLd~~tG~~ 166 (981)
+ ..++..+ -++. .++. .+|.|+|+. +|..
T Consensus 126 -a-------~~vg~~g---w~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 126 -A-------TEVGSGG---WSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp -S-------EEEECSS---GGGEEEEEECTTSCEEEEE--TTEE
T ss_pred -c-------cEeccCC---CCceEEEEECCCceEEEEe--CCcE
Confidence 0 1111100 0122 2222 589999998 7773
No 316
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=30.91 E-value=2.2e+02 Score=25.24 Aligned_cols=61 Identities=16% Similarity=0.307 Sum_probs=36.2
Q ss_pred ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEec
Q 002016 94 LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDF 172 (981)
Q Consensus 94 ~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~ 172 (981)
.+...+.+..++ .+..++ .++.+|......+.. ....+....+|.|.-+| .+|+++|+...
T Consensus 18 sg~y~l~~q~Dg-NLvly~--~~~~vW~ant~~~~~--------------~~~~L~l~~dGnLvL~d-~~~~~vWss~t 78 (105)
T 4h3o_A 18 VEPYHFIMQDDC-NLVLYD--HSTSTWASNTEIGGK--------------SGCSAVLQSDGNFVVYD-SSGRSLWASHS 78 (105)
T ss_dssp ETTEEEEECTTS-CEEEEE--TTEEEEECCCCCTTC--------------CSCEEEECTTSCEEEEC-TTCCEEEECCC
T ss_pred ECCEEEEECCCC-eEEEEE--CCEEEEEecCCCCCC--------------ccEEEEEeCCccEEEEC-CCcEEEEEecC
Confidence 355556656654 566666 468899877554321 01122223578777777 56889998644
No 317
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=30.84 E-value=2.1e+02 Score=25.37 Aligned_cols=56 Identities=20% Similarity=0.388 Sum_probs=31.8
Q ss_pred EEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 58 VSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 58 vaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
+--.+|.+.-.+ .+.++|......+. ...-.+.+..+| .+.-+|. +|+.+|.....
T Consensus 24 ~~q~DgNLvly~--~~~~vW~ant~~~~--------~~~~~L~l~~dG-nLvL~d~-~~~~vWss~t~ 79 (105)
T 4h3o_A 24 IMQDDCNLVLYD--HSTSTWASNTEIGG--------KSGCSAVLQSDG-NFVVYDS-SGRSLWASHST 79 (105)
T ss_dssp EECTTSCEEEEE--TTEEEEECCCCCTT--------CCSCEEEECTTS-CEEEECT-TCCEEEECCCC
T ss_pred EECCCCeEEEEE--CCEEEEEecCCCCC--------CccEEEEEeCCc-cEEEECC-CcEEEEEecCC
Confidence 334455555455 46789986544331 111234445554 6777774 78999987644
No 318
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=30.56 E-value=5.9e+02 Score=28.17 Aligned_cols=102 Identities=5% Similarity=0.001 Sum_probs=51.5
Q ss_pred CCEEEEEcCC-----CEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCCcEeEEEeccC
Q 002016 53 RKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRG 126 (981)
Q Consensus 53 ~~~VyvaT~~-----g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG~llWe~~~~~ 126 (981)
++.||++... ..+..+++ +|...+...+.......++.....++.++++. ..++|+.+|+.+|...-......
T Consensus 190 G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~ 268 (430)
T 3tc9_A 190 ADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD 268 (430)
T ss_dssp SSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC
Confidence 4559998863 24666775 56555444443211112331112145555553 45799999998776522222222
Q ss_pred ccccCCceeeccccccc-CCcEEEEE--eCCEEEEEECC
Q 002016 127 SKHSKPLLLVPTNLKVD-KDSLILVS--SKGCLHAVSSI 162 (981)
Q Consensus 127 ~~~s~~~~~v~~~~~~~-~~~~V~V~--~~g~l~aLd~~ 162 (981)
... +..+. .+ .++.+++. .++++++++..
T Consensus 269 ~~~--P~gia-----~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 269 SGW--EFHIQ-----FHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSC--CEEEE-----ECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCc--ceeEE-----EcCCCCEEEEEECCCCEEEEEeCC
Confidence 111 11111 12 23457775 37888887643
No 319
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=30.00 E-value=2.6e+02 Score=24.88 Aligned_cols=80 Identities=11% Similarity=0.255 Sum_probs=43.1
Q ss_pred cCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeeccc
Q 002016 60 TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTN 139 (981)
Q Consensus 60 T~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~ 139 (981)
..+|.+.-.+. |.++|....... .....+.+..+ |.+...| +|+.+|+.......
T Consensus 26 ~~dgnlvl~~~--~~~vW~sn~~~~---------~~~~~l~l~~~-GNLvl~d--~~~~~W~S~~~~~~----------- 80 (112)
T 1xd5_A 26 QNDCNLVLYDN--NRAVWASGTNGK---------ASGCVLKMQND-GNLVIYS--GSRAIWASNTNRQN----------- 80 (112)
T ss_dssp CTTSCEEEEET--TEEEEECCCTTS---------CSSEEEEECTT-SCEEEEE--TTEEEEECCCCCSC-----------
T ss_pred cCCCcEEEEEC--CEEEEeCCCcCC---------CCCEEEEEeCC-CCEEEEc--CCEEEEECCccCCC-----------
Confidence 44554555564 789998654321 01123444444 4566777 78999996533211
Q ss_pred ccccCCcEEEEE-eCCEEEEEECCCCcEeEEE
Q 002016 140 LKVDKDSLILVS-SKGCLHAVSSIDGEILWTR 170 (981)
Q Consensus 140 ~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~ 170 (981)
+...+.+ .+|.+..++ .++.+.|+.
T Consensus 81 -----g~~~l~l~~dGnlvl~~-~~~~~~W~S 106 (112)
T 1xd5_A 81 -----GNYYLILQRDRNVVIYD-NSNNAIWAT 106 (112)
T ss_dssp -----CCCEEEECTTSCEEEEC-TTSCEEEEC
T ss_pred -----CCEEEEEeCCCcEEEEC-CCCceEEEC
Confidence 1122333 355555554 356788974
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=29.72 E-value=7.5e+02 Score=29.09 Aligned_cols=61 Identities=11% Similarity=0.007 Sum_probs=29.9
Q ss_pred EEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEc-cCCEEEEEeCCCC
Q 002016 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDG 116 (981)
Q Consensus 55 ~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~-~g~~V~A~da~tG 116 (981)
.|+++ ..+.|..+|..+.+..-...+..-....++.....++.+|++. .++.|+.++...+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~ 69 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS 69 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC
Confidence 45554 5567889998766542222221111112331122345555543 3567777776543
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.23 E-value=1.7e+02 Score=32.28 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=44.1
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPD 115 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~t 115 (981)
..+.+|+.|..|.|+-.|..||..+.+..+..+.-+....-...+|++.|.-. |+|.....+.
T Consensus 270 kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~-GqVl~v~v~~ 332 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK-GQVLSVCVEE 332 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETT-CEEEEEEECT
T ss_pred cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCC-CEEEEEEECc
Confidence 46679999999999999999999999999877632212211235667776654 4666665543
No 322
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=28.86 E-value=2.5e+02 Score=25.19 Aligned_cols=61 Identities=11% Similarity=0.052 Sum_probs=35.9
Q ss_pred CEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 54 ~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
...+.-..+|.|.-.+...|.++|........ ....+.+..+ |.+.-.|. +|+.+|+....
T Consensus 25 ~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~---------~~~~l~l~~d-GNLVl~d~-~~~~iW~S~t~ 85 (113)
T 3mez_B 25 DYSLVMRDDCNLVLTKGSKTNIVWESGTSGRG---------QHCFMRLGHS-GELDITDD-RLNTVFVSNTV 85 (113)
T ss_dssp TEEEEECTTSCEEEEETTTTEEEEECCCTTSC---------SSCEEEECTT-SCEEEECT-TSCEEEECSCC
T ss_pred CEEEEEcCCCEEEEEECCCCEEEEECCcccCC---------cCEEEEEeCC-CcEEEECC-CCCEEEECCCc
Confidence 34455567777777776568999985443210 1113333443 35666664 67889986643
No 323
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=28.82 E-value=7.8e+02 Score=29.02 Aligned_cols=102 Identities=10% Similarity=0.038 Sum_probs=53.0
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCc--cee--e--eeee-ecCeEEEEEccC--------CEEEEEeCCCCc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND--VVD--G--IDIA-LGKYVITLSSDG--------STLRAWNLPDGQ 117 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~--~i~--~--l~~~-~~~~vV~Vs~~g--------~~V~A~da~tG~ 117 (981)
++.+++.+ +|.|...|.++|+. ++.+.... ... . .... .+..+++.+.+. +.++.||..+|+
T Consensus 27 dg~~~~~~-~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 27 DHEYLYKQ-ENNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCE--EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCcEEEEc-CCcEEEEECCCCce--EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 34444444 89999999999986 23333321 010 1 1112 344444433311 467899999998
Q ss_pred EeEEEeccCcc-ccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcE
Q 002016 118 MVWESFLRGSK-HSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEI 166 (981)
Q Consensus 118 llWe~~~~~~~-~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~ 166 (981)
..- +.... ....+.+-| + +..++...++.|+..|..+|+.
T Consensus 104 ~~~---l~~~~~~~~~~~~SP-----d-G~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 104 LIT---EERIPNNTQWVTWSP-----V-GHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECC---SSCCCTTEEEEEECS-----S-TTCEEEEETTEEEEESSTTSCC
T ss_pred EEE---cccCCCcceeeEECC-----C-CCEEEEEECCeEEEEECCCCce
Confidence 652 22211 001111111 2 2333334688899888888764
No 324
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=28.11 E-value=7.2e+02 Score=28.35 Aligned_cols=192 Identities=9% Similarity=-0.008 Sum_probs=102.1
Q ss_pred CCCEEEEEcC-CCEEEEEECCCC--ccceEEEcCCCc--------ceeeeeeeecCeEEEEEccC-------CEEEEEeC
Q 002016 52 GRKRVVVSTE-ENVIASLDLRHG--EIFWRHVLGIND--------VVDGIDIALGKYVITLSSDG-------STLRAWNL 113 (981)
Q Consensus 52 ~~~~VyvaT~-~g~L~ALd~~tG--~ivWR~~l~~~~--------~i~~l~~~~~~~vV~Vs~~g-------~~V~A~da 113 (981)
+++++|+... .+.|+.+|.++- ++.=...++..+ .-.+++. ..++ ++|+..| +.+..+|.
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~-~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC-GPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE-CSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE-CCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 4667888765 578999998744 222222332110 0001111 2333 5554322 58999999
Q ss_pred CCCcEeEEEeccCcc--ccCCceeecccccccCCcEEEEEe--------------------CCEEEEEECCCCcEeEEEe
Q 002016 114 PDGQMVWESFLRGSK--HSKPLLLVPTNLKVDKDSLILVSS--------------------KGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 114 ~tG~llWe~~~~~~~--~s~~~~~v~~~~~~~~~~~V~V~~--------------------~g~l~aLd~~tG~~~W~~~ 171 (981)
+|++++=++...... ...+..+-| + .+.+++.. +.+|..+|..+|+++-+..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p-----~-~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNL-----P-NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEET-----T-TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEEccCCCCccccceEEECC-----C-CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 999998777654221 111122221 1 33333332 6899999999999888887
Q ss_pred ccCcceeeeEEEE--eecCCeEEEEEe-----cCCceeEEEEEECCCCceeeeeeeeccC------------------Cc
Q 002016 172 FAAESVEVQQVIQ--LDESDQIYVVGY-----AGSSQFHAYQINAMNGELLNHETAAFSG------------------GF 226 (981)
Q Consensus 172 ~~~~~~~~~~vv~--s~~~~~Vyvvg~-----~g~~~~~v~aLd~~tG~~lw~~~v~~p~------------------~~ 226 (981)
.+.....+..+.. ...+..+|+++. -. +. |..+....|+......+..+. ..
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls-s~--V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLS-SS--IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC-EE--EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCC-ce--EEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 7633333555543 335667787664 22 23 433333345432222222221 11
Q ss_pred cCceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 227 VGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 227 ~~~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
...+.+- .+..+++.+...+.+.+.++.
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 1123332 345777777778888888875
No 325
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=27.99 E-value=73 Score=28.81 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=22.7
Q ss_pred CcEEEEEEEEceeceEEEEEeecCC
Q 002016 730 EAWLVVYLIDTITGRILHRMTHHGA 754 (981)
Q Consensus 730 ~~~l~v~liD~VtG~il~s~~h~~~ 754 (981)
.+.++|.++|.-||+++|+..+.+.
T Consensus 44 ~~~vTItItNe~TG~~VYs~~~s~p 68 (101)
T 3sd2_A 44 KDYAIITVTNKATGEIVHSKTYHNT 68 (101)
T ss_dssp CSCEEEEEEETTTCCEEEEEEESSC
T ss_pred CCcEEEEEEECCCCcEEEEEeccCC
Confidence 3789999999999999999998873
No 326
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=27.40 E-value=8.2e+02 Score=28.82 Aligned_cols=65 Identities=6% Similarity=-0.000 Sum_probs=39.6
Q ss_pred ccCCCEEEEEcCC---------CEEEEEECCCCccceEEEcCC-Ccceeeee-eeecCeEEEEEccCCEEEEEeCCCCcE
Q 002016 50 KTGRKRVVVSTEE---------NVIASLDLRHGEIFWRHVLGI-NDVVDGID-IALGKYVITLSSDGSTLRAWNLPDGQM 118 (981)
Q Consensus 50 ~~~~~~VyvaT~~---------g~L~ALd~~tG~ivWR~~l~~-~~~i~~l~-~~~~~~vV~Vs~~g~~V~A~da~tG~l 118 (981)
+.+++.|++++.+ +.+.-+|.++|+..- +.. ...+.... -+.|..+++++ ++.|+.||..+|+.
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---EERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPS 144 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---SSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCC
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE---cccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCce
Confidence 3456667777764 667789999998542 332 11121111 13566677754 35899999998874
Q ss_pred e
Q 002016 119 V 119 (981)
Q Consensus 119 l 119 (981)
.
T Consensus 145 ~ 145 (740)
T 4a5s_A 145 Y 145 (740)
T ss_dssp E
T ss_pred E
Confidence 3
No 327
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=26.99 E-value=8.3e+02 Score=28.70 Aligned_cols=185 Identities=13% Similarity=0.090 Sum_probs=88.1
Q ss_pred CCCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeee-ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 52 ~~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~-~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
.+++||+++. .+.|..+++..+. .+..+..+ ....++.+- .++.+++.-...+.|...+.. |... ..+....
T Consensus 47 ~~~~lywtD~~~~~I~r~~~~g~~--~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~~--~~l~~~~ 121 (628)
T 4a0p_A 47 TDNRIYWTDISLKTISRAFMNGSA--LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQHR--QVLVWKD 121 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-STTC--EEEECSS
T ss_pred CCCEEEEEECCCCeEEEEECCCCC--cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC-CCcE--EEEEeCC
Confidence 4678888864 5788888875443 23333322 122344111 233444433345678888864 4321 1111111
Q ss_pred ccCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 129 HSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
+..+..++ .+ ..+.+|+.. .+++.+.+.......=-.. .-..|..+......+.+|++-...+ .+
T Consensus 122 l~~P~~ia-----vdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~~~~~LY~aD~~~~---~I 190 (628)
T 4a0p_A 122 LDSPRALA-----LDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP---NVGRANGLTIDYAKRRLYWTDLDTN---LI 190 (628)
T ss_dssp CCCEEEEE-----EETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SCSSEEEEEEETTTTEEEEEETTTT---EE
T ss_pred CCCcccEE-----EccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC---CCCCcceEEEccccCEEEEEECCCC---EE
Confidence 11111111 11 244566643 4567666653322111111 1112333432234688888654333 57
Q ss_pred EEEECCCCceeeeeeeeccCCccCce-EEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 205 YQINAMNGELLNHETAAFSGGFVGDV-ALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 205 ~aLd~~tG~~lw~~~v~~p~~~~~~~-~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|...+.. +. +. ..+.... +-+.++.++|+|..++.+...+..+|+
T Consensus 191 ~~~d~dG~~~--~v-~~--~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 191 ESSNMLGLNR--EV-IA--DDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEETTSCSC--EE-EE--ECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEcCCCCce--EE-ee--ccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 8888754433 11 11 1122211 112456788888888888888876665
No 328
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=26.47 E-value=5.4e+02 Score=26.40 Aligned_cols=56 Identities=20% Similarity=0.112 Sum_probs=32.4
Q ss_pred CCEEEEEECCCCccceEEEcCCCcceeeeee-eecCeEEEEEccC----CEEEEEeCCCCcEeEEEe
Q 002016 62 ENVIASLDLRHGEIFWRHVLGINDVVDGIDI-ALGKYVITLSSDG----STLRAWNLPDGQMVWESF 123 (981)
Q Consensus 62 ~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~-~~~~~vV~Vs~~g----~~V~A~da~tG~llWe~~ 123 (981)
.+.|..+|..+|+. + .+. . +..... +.+..+++++..+ ..|+.||..+|+..--..
T Consensus 42 ~~~l~~~d~~~~~~--~-~l~-~--~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~ 102 (347)
T 2gop_A 42 ENTIVIENLKNNAR--R-FIE-N--ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE 102 (347)
T ss_dssp EEEEEEEETTTCCE--E-EEE-S--CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred cceEEEEeCCCCce--E-Ecc-c--CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc
Confidence 56788889888874 2 221 1 111211 2455566665432 358999998887654433
No 329
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=26.00 E-value=3.1e+02 Score=24.43 Aligned_cols=56 Identities=14% Similarity=0.304 Sum_probs=32.9
Q ss_pred EEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEecc
Q 002016 57 VVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (981)
Q Consensus 57 yvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~ 125 (981)
+.-..+|.+.-.| .|.++|....... .....+.+..+ |.+...|. +|+.+|+....
T Consensus 24 l~~~~dGnlvl~~--~~~~vW~sn~~~~---------~~~~~l~l~~d-GNLVl~~~-~~~~~W~S~t~ 79 (110)
T 3a0c_A 24 LIMQGDCNFVLYD--SGKPVWASNTGGL---------GSGCRLTLHNN-GNLVIYDQ-SNRVIWQTKTN 79 (110)
T ss_dssp EEECTTSCEEEEE--TTEEEEECCCTTS---------CSSCEEEECTT-SCEEEECT-TCCEEEECCCC
T ss_pred EEEcCCCcEEEEE--CCEEEEECCCCCC---------CCcEEEEEeCC-CCEEEECC-CCcEEEecCCC
Confidence 3335566666666 4889998654322 11123444544 46777775 78999996643
No 330
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=24.32 E-value=9.6e+02 Score=28.57 Aligned_cols=59 Identities=10% Similarity=0.027 Sum_probs=30.9
Q ss_pred CCEEEEEECCCCcEeE--EEeccCcceeeeEEEEeecCCeEEEEEecC-CceeEEEEEECCCC
Q 002016 153 KGCLHAVSSIDGEILW--TRDFAAESVEVQQVIQLDESDQIYVVGYAG-SSQFHAYQINAMNG 212 (981)
Q Consensus 153 ~g~l~aLd~~tG~~~W--~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g-~~~~~v~aLd~~tG 212 (981)
...++.+|..+|...+ +.-.+........+ .-..++.+|+.+..+ ..+.+++.+|..++
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~-~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~ 355 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV-QMHGTSHLVILTNEGGAVNHKLLIAPRGQP 355 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTTCCEEE-EEETTTEEEEEECTTTCTTCEEEEEETTST
T ss_pred CceEEEEECCCCCCCceeEEeecCCCCceEEE-eeeeCCEEEEEeCCCCCCCcEEEEEcCCCc
Confidence 4467888887764333 22111111000111 002377888877654 34568999998764
No 331
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.23 E-value=1.8e+02 Score=26.15 Aligned_cols=62 Identities=16% Similarity=0.261 Sum_probs=37.7
Q ss_pred ecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEec
Q 002016 94 LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDF 172 (981)
Q Consensus 94 ~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~~ 172 (981)
.+...+.+..+| .+..++...|+.+|........ ....+....+|.|.-+|. +|.++|+-..
T Consensus 23 ~g~~~L~~q~dG-NLvL~~~~~~~~vWssnt~~~~---------------~~~~l~l~~dGNLVl~d~-~~~~iW~S~t 84 (113)
T 3mez_B 23 TRDYSLVMRDDC-NLVLTKGSKTNIVWESGTSGRG---------------QHCFMRLGHSGELDITDD-RLNTVFVSNT 84 (113)
T ss_dssp ETTEEEEECTTS-CEEEEETTTTEEEEECCCTTSC---------------SSCEEEECTTSCEEEECT-TSCEEEECSC
T ss_pred cCCEEEEEcCCC-EEEEEECCCCEEEEECCcccCC---------------cCEEEEEeCCCcEEEECC-CCCEEEECCC
Confidence 455666666654 5777776568999996643211 011122235777777774 6789998644
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=24.08 E-value=9.1e+02 Score=28.22 Aligned_cols=183 Identities=13% Similarity=0.034 Sum_probs=84.8
Q ss_pred CCEEEEEcC-CCEEEEEECCCCccceEEEcCCC-cceeeeeeee-cCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCcc
Q 002016 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIAL-GKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (981)
Q Consensus 53 ~~~VyvaT~-~g~L~ALd~~tG~ivWR~~l~~~-~~i~~l~~~~-~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~ 128 (981)
+++||+++. .+.|..+++..+. ++..+..+ ....++ +.. .++.+|++ ...+.+...+.. |+.. ..+....
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g~~--~~~v~~~~~~~p~Gl-AvD~~~~~lY~tD~~~~~I~v~~~~-G~~~--~~l~~~~ 433 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDGSG--SQFVVTAQIAHPDGI-AVDWVARNLYWTDTGTDRIEVTRLN-GTMR--KILISED 433 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSCCCEE-EEETTTTEEEEEETTTTEEEEEETT-SCSC--EEEECTT
T ss_pred CCeEEEEeCCCCeEEEEEcCCCc--cEEEEECCCCCcCce-EEecccCcEEEEeCCCCcEEEEeCC-CCeE--EEEEECC
Confidence 567888764 5778888875432 23333322 122344 222 13344444 334677777764 4421 1111111
Q ss_pred ccCCceeeccccccc-CCcEEEEEe---CCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEE
Q 002016 129 HSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (981)
Q Consensus 129 ~s~~~~~v~~~~~~~-~~~~V~V~~---~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v 204 (981)
+..+..++ .+ ..+.+|+.. .+++.+.+. +|..+=..-.. .-..|..+......+.+|++-...+ ++
T Consensus 434 l~~P~~ia-----vdp~~G~ly~tD~g~~~~I~r~~~-dG~~~~~l~~~-~l~~P~GlalD~~~~~LY~aD~~~~---~I 503 (619)
T 3s94_A 434 LEEPRAIV-----LDPMVGYMYWTDWGEIPKIERAAL-DGSDRVVLVNT-SLGWPNGLALDYDEGKIYWGDAKTD---KI 503 (619)
T ss_dssp CCSEEEEE-----EETTTTEEEEEECSSSCEEEEEET-TSCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTTT---EE
T ss_pred CCCeeeEE-----EEcCCCcEEEecCCCCCEEEEEcc-CCCccEEEEeC-CCCCCeeeEEcccCCEEEEEECCCC---EE
Confidence 21111111 01 134555542 245655553 23211010000 0011333322234778888644332 57
Q ss_pred EEEECCCCceeee---eeeeccCCccCceEEEcCcEEEEEECCCCeEEEEEeecCe
Q 002016 205 YQINAMNGELLNH---ETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (981)
Q Consensus 205 ~aLd~~tG~~lw~---~~v~~p~~~~~~~~~vg~~~lv~~d~~~g~L~v~~L~sg~ 257 (981)
..+|+. |..... ..+..|.+ +. +.++.++|+|..++.+...+..+|.
T Consensus 504 ~~~~~d-G~~~~~~~~~~l~~P~g----la-v~~~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 504 EVMNTD-GTGRRVLVEDKIPHIFG----FT-LLGDYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp EEEESS-SCCCEEEEECCCCSSCC----EE-EETTEEEEECTTSSCEEEEESSSCC
T ss_pred EEEecC-CCceEEEeccCCCCcEE----EE-EECCEEEEeecCCCeEEEEEcCCCc
Confidence 777764 332211 11222222 22 3456889999888889888888775
No 333
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=23.90 E-value=1.4e+02 Score=26.79 Aligned_cols=58 Identities=17% Similarity=0.417 Sum_probs=34.3
Q ss_pred cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEEeCCEEEEEECCCCcEeEEEe
Q 002016 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRD 171 (981)
Q Consensus 95 ~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~~~g~l~aLd~~tG~~~W~~~ 171 (981)
+...+.+..+| .+.-+| .|+.+|......+. ....+....+|.|.-+|. +|.++|+-.
T Consensus 20 ~~~~l~~~~dG-nlvl~~--~~~~vW~sn~~~~~---------------~~~~l~l~~dGNLVl~~~-~~~~~W~S~ 77 (110)
T 3a0c_A 20 PSYRLIMQGDC-NFVLYD--SGKPVWASNTGGLG---------------SGCRLTLHNNGNLVIYDQ-SNRVIWQTK 77 (110)
T ss_dssp TTEEEEECTTS-CEEEEE--TTEEEEECCCTTSC---------------SSCEEEECTTSCEEEECT-TCCEEEECC
T ss_pred CCEEEEEcCCC-cEEEEE--CCEEEEECCCCCCC---------------CcEEEEEeCCCCEEEECC-CCcEEEecC
Confidence 34445555554 566677 48999987654211 011122235777877774 789999854
No 334
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=22.69 E-value=7.1e+02 Score=26.47 Aligned_cols=183 Identities=8% Similarity=-0.003 Sum_probs=80.3
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCCCCcEeEEEeccCccccC
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~tG~llWe~~~~~~~~s~ 131 (981)
...++++... .|..+++..++ .+..+.......++.....++.++++ ..++.|+.++.+.+...-- ...+.. .
T Consensus 44 ~~~ll~~~~~-~I~~i~~~g~~--~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~~~-~ 117 (349)
T 3v64_C 44 EPVLLFANRI-DIRQVLPHRSE--YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTGLE-S 117 (349)
T ss_dssp CCEEEEECBS-CEEEECTTSCC--EEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCS-C
T ss_pred CceeEeeccc-ceEEEeCCCCe--eEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE--EeCCCC-C
Confidence 3456666554 47888875443 23333222112233111134455554 3456788888765542111 111100 1
Q ss_pred Cceeeccccccc-CCcEEEEE--eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 132 PLLLVPTNLKVD-KDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 132 ~~~~v~~~~~~~-~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
+..+. .+ .++.+|+. ..+++..++.......--.. ..-..|..+.....++.+|+..... ..++..++
T Consensus 118 p~gla-----vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~--~~l~~P~~iavdp~~g~ly~td~~~--~~~I~r~~ 188 (349)
T 3v64_C 118 PGGLA-----VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--QSLEKPRAIALHPMEGTIYWTDWGN--TPRIEASS 188 (349)
T ss_dssp CCEEE-----EETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--TTCSCEEEEEEETTTTEEEEEECSS--SCEEEEEE
T ss_pred ccEEE-----EecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe--CCCCCcceEEEecCcCeEEEeccCC--CCEEEEEe
Confidence 11111 11 24456664 25677777765333221111 1111244443222467888765432 12577777
Q ss_pred CCCCceeeeeeeeccCCccC--ceEEE-cCcEEEEEECCCCeEEEEEee
Q 002016 209 AMNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFK 254 (981)
Q Consensus 209 ~~tG~~lw~~~v~~p~~~~~--~~~~v-g~~~lv~~d~~~g~L~v~~L~ 254 (981)
+. |...... ...++.. .+.+- .++.++|+|...+.+.+.++.
T Consensus 189 ~d-G~~~~~~---~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 189 MD-GSGRRII---ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp TT-SCSCEES---CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CC-CCCcEEE---EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 64 4322111 1111211 11111 345666666666666666654
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=22.16 E-value=2.5e+02 Score=32.29 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCCEEEEEECCCCccceEEEcCCCcceeeeeeeecCeEEEEEccCCEEEEEeCC
Q 002016 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP 114 (981)
Q Consensus 52 ~~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~ 114 (981)
..+.+|+.|..|.|+-.|..||..+.+..+..+.-+...+-...+|++.|... |+|.....+
T Consensus 269 kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~-GqVl~v~v~ 330 (494)
T 1bpo_A 269 KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK-GQVLSVCVE 330 (494)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETT-CEEEEEEEC
T ss_pred cCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccC-ceEEEEEEc
Confidence 46779999999999999999999999999876522211111134566666543 356555443
No 336
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=22.12 E-value=9.3e+02 Score=27.58 Aligned_cols=63 Identities=8% Similarity=0.060 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCC-------EEEEEECCC-Cccce---EEEcCCCcceeeeeeeecCeEEEEE-ccCCEEEEEeCC
Q 002016 52 GRKRVVVSTEEN-------VIASLDLRH-GEIFW---RHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLP 114 (981)
Q Consensus 52 ~~~~VyvaT~~g-------~L~ALd~~t-G~ivW---R~~l~~~~~i~~l~~~~~~~vV~Vs-~~g~~V~A~da~ 114 (981)
+++.+|+++..+ .++.++++. |+..+ ++.+.......++.....++.++++ ...++|+.+|.+
T Consensus 203 ~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 203 EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 345699998875 377887654 66543 1222211111133122224455544 445789999998
No 337
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=21.60 E-value=7.1e+02 Score=26.06 Aligned_cols=148 Identities=10% Similarity=0.124 Sum_probs=69.8
Q ss_pred CCEEEEEcCCCEEEEEECCCCccceEEEcCCC---cceeeeeeeecCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccc
Q 002016 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN---DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (981)
Q Consensus 53 ~~~VyvaT~~g~L~ALd~~tG~ivWR~~l~~~---~~i~~l~~~~~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~ 129 (981)
++.+|++.+.|.|+. ..+|-.-|+...... ..+..+.+...+.+++++..+...+ ..||-.-|+.......
T Consensus 89 ~~~~~~~g~~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~---S~DgG~tW~~~~~~~~- 162 (327)
T 2xbg_A 89 GNEGWIVGEPPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR---TKDSGKNWQALVQEAI- 162 (327)
T ss_dssp TTEEEEEEETTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE---ESSTTSSEEEEECSCC-
T ss_pred CCeEEEEECCCeEEE--ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE---EcCCCCCCEEeecCCC-
Confidence 467888888887765 357777999864321 1222231223344444454443223 3456667987643211
Q ss_pred cCCceeecccccccCCcEEEEE-eCCEEEEEECCCCcEeEEEeccCcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 130 s~~~~~v~~~~~~~~~~~V~V~-~~g~l~aLd~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
....-+ ....++.+++. .+|.+++-+ ..|-.-|+............+. ...++.+|+++..| .++ +.
T Consensus 163 -~~~~~~----~~~~~~~~~~~g~~G~~~~S~-d~gG~tW~~~~~~~~~~~~~~~-~~~~g~~~~~~~~G----~~~-~s 230 (327)
T 2xbg_A 163 -GVMRNL----NRSPSGEYVAVSSRGSFYSTW-EPGQTAWEPHNRTTSRRLHNMG-FTPDGRLWMIVNGG----KIA-FS 230 (327)
T ss_dssp -CCEEEE----EECTTSCEEEEETTSSEEEEE-CTTCSSCEEEECCSSSCEEEEE-ECTTSCEEEEETTT----EEE-EE
T ss_pred -cceEEE----EEcCCCcEEEEECCCcEEEEe-CCCCCceeECCCCCCCccceeE-ECCCCCEEEEeCCc----eEE-Ee
Confidence 111111 00112334443 466666554 3335667754322111122232 23456777766544 222 22
Q ss_pred CCCCceeeee
Q 002016 209 AMNGELLNHE 218 (981)
Q Consensus 209 ~~tG~~lw~~ 218 (981)
..+|-..|+.
T Consensus 231 ~~D~G~tW~~ 240 (327)
T 2xbg_A 231 DPDNSENWGE 240 (327)
T ss_dssp ETTEEEEECC
T ss_pred cCCCCCeeEe
Confidence 2344556765
No 338
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=20.97 E-value=7.1e+02 Score=25.78 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=17.4
Q ss_pred CCcEEEEEeCCEEEEEEC-CCCcEeEEEe
Q 002016 144 KDSLILVSSKGCLHAVSS-IDGEILWTRD 171 (981)
Q Consensus 144 ~~~~V~V~~~g~l~aLd~-~tG~~~W~~~ 171 (981)
.++.+++..+|.|++.++ ++|..-|...
T Consensus 97 ~~G~LYav~dG~iyr~~pP~~~~~~Wl~~ 125 (236)
T 1tl2_A 97 PNGYLYAVSKDKLYKASPPQSDTDNWIAR 125 (236)
T ss_dssp TTSCEEEEETTEEEEESCCCSTTCCHHHH
T ss_pred CCCCEEEeCCCEEEEeCCCcCCCCceecc
Confidence 345566667788877775 4556666543
No 339
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=20.84 E-value=1.5e+02 Score=26.98 Aligned_cols=25 Identities=12% Similarity=0.124 Sum_probs=22.5
Q ss_pred cEEEEEEEEceeceEEEEEeecCCC
Q 002016 731 AWLVVYLIDTITGRILHRMTHHGAQ 755 (981)
Q Consensus 731 ~~l~v~liD~VtG~il~s~~h~~~~ 755 (981)
..++|.+.|.-+|+++|+..+....
T Consensus 49 ~~vtItI~~~~tG~iVY~~~v~~~~ 73 (108)
T 3d33_A 49 RDMTIRITDMAKGGVVYENDIPEVQ 73 (108)
T ss_dssp SEEEEEEEETTTCCEEEEEEECGGG
T ss_pred CCEEEEEEECCCCcEEEEEeecCCC
Confidence 6899999999999999999997753
No 340
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=20.10 E-value=7.3e+02 Score=25.61 Aligned_cols=104 Identities=8% Similarity=0.074 Sum_probs=59.5
Q ss_pred cCeEEEEEccCCEEEEEeCCCCcEeEEEeccCccccCCceeecccccccCCcEEEEE--eCCEEEEEECCCCcEeEEEec
Q 002016 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDF 172 (981)
Q Consensus 95 ~~~vV~Vs~~g~~V~A~da~tG~llWe~~~~~~~~s~~~~~v~~~~~~~~~~~V~V~--~~g~l~aLd~~tG~~~W~~~~ 172 (981)
++.+++|+...+.|+.+|+. |+++.+..+.+..-..+..+ ..++.+++. .+++++.++..+....|....
T Consensus 38 ~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~-------~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~ 109 (255)
T 3qqz_A 38 SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEY-------IGDNQFVISDERDYAIYVISLTPNSEVKILKK 109 (255)
T ss_dssp TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEE-------CSTTEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEE-------eCCCEEEEEECCCCcEEEEEcCCCCeeeeeee
Confidence 34455667667899999997 99998888754221112222 234445444 377888888665554563322
Q ss_pred c-------CcceeeeEEEEeecCCeEEEEEecCCceeEEEEEE
Q 002016 173 A-------AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (981)
Q Consensus 173 ~-------~~~~~~~~vv~s~~~~~Vyvvg~~g~~~~~v~aLd 208 (981)
. ..+...+.+......+.+|++.-.+ ...++.++
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~~ 150 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKVN 150 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEEE
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEEc
Confidence 1 1111234554334566888865443 23577777
Done!