Your job contains 1 sequence.
>002017
MATTKPQRSPEEIEDIILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLSRDL
MERVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMI
VSYCRIHLANPDFFGSNNDNNYEINNSNNKSSISPLLPFIFAEVGGGIDGFGNSTSSGSQ
CPPGFLKEFFEEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGVK
SLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRP
ADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEPL
SCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEVS
EWINKGNPAKADGSKHFSDGENQLLQSQEATSSSGGASEPSLPAGRPASIGGGKSKYPFI
CECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLEITRIEK
EIELSSQEKLCYEAQILRDDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSS
ATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHR
NAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQE
RQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQL
VGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFS
AAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQYTLMKDPV
ILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRHGE
GLNIQSIKDTIQTTNGDMLID
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002017
(981 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2180862 - symbol:AT5G15400 species:3702 "Arabi... 1941 0. 2
DICTYBASE|DDB_G0292264 - symbol:nosA "U box domain-contai... 783 1.2e-119 4
ASPGD|ASPL0000072757 - symbol:AN10556 species:162425 "Eme... 675 1.2e-97 4
ZFIN|ZDB-GENE-020205-1 - symbol:ube4b "ubiquitination fac... 700 7.3e-92 4
POMBASE|SPAC20H4.10 - symbol:ufd2 "ubiquitin-protein liga... 633 8.5e-90 4
FB|FBgn0028467 - symbol:CG11070 species:7227 "Drosophila ... 744 1.8e-89 4
RGD|1304738 - symbol:Ube4b "ubiquitination factor E4B" sp... 691 3.5e-87 4
UNIPROTKB|F1M9N5 - symbol:Ube4a "Ubiquitin conjugation fa... 711 5.4e-86 4
UNIPROTKB|Q14139 - symbol:UBE4A "Ubiquitin conjugation fa... 709 7.4e-86 4
UNIPROTKB|E2RPU3 - symbol:UBE4A "Uncharacterized protein"... 707 1.1e-85 4
UNIPROTKB|J9P2H4 - symbol:UBE4B "Uncharacterized protein"... 689 1.7e-85 4
UNIPROTKB|F1SAK7 - symbol:UBE4A "Uncharacterized protein"... 707 2.9e-85 4
RGD|1303173 - symbol:Ube4a "ubiquitination factor E4A" sp... 704 4.0e-85 4
UNIPROTKB|O95155 - symbol:UBE4B "Ubiquitin conjugation fa... 687 4.0e-85 4
UNIPROTKB|F1NGY1 - symbol:UBE4B "Uncharacterized protein"... 680 5.2e-85 4
UNIPROTKB|F1P7I0 - symbol:UBE4B "Uncharacterized protein"... 689 1.0e-84 4
UNIPROTKB|J9P9M3 - symbol:UBE4B "Uncharacterized protein"... 689 1.6e-84 4
UNIPROTKB|A6QNS2 - symbol:UBE4B "UBE4B protein" species:9... 688 1.8e-84 4
UNIPROTKB|F1M8D6 - symbol:Ube4b "Protein Ube4b" species:1... 673 6.9e-83 4
UNIPROTKB|A5PKG6 - symbol:UBE4A "Ubiquitin conjugation fa... 710 3.5e-82 3
SGD|S000002349 - symbol:UFD2 "Ubiquitin chain assembly fa... 665 5.1e-82 4
ZFIN|ZDB-GENE-070410-21 - symbol:ube4a "ubiquitination fa... 683 6.8e-77 3
CGD|CAL0003403 - symbol:orf19.5965 species:5476 "Candida ... 647 1.4e-75 3
FB|FBgn0032467 - symbol:CG9934 species:7227 "Drosophila m... 637 1.5e-74 4
UNIPROTKB|B7Z7P0 - symbol:UBE4A "cDNA FLJ51394, highly si... 709 5.5e-70 1
UNIPROTKB|F1M8W6 - symbol:Ube4a "Ubiquitin conjugation fa... 502 2.8e-66 5
UNIPROTKB|F1NIK2 - symbol:CBL "Uncharacterized protein" s... 609 7.3e-66 4
UNIPROTKB|E1C6M5 - symbol:CBL "Uncharacterized protein" s... 420 3.9e-64 5
WB|WBGene00006734 - symbol:ufd-2 species:6239 "Caenorhabd... 483 7.6e-48 3
UNIPROTKB|Q95QB5 - symbol:ufd-2 "Protein UFD-2, isoform b... 483 7.6e-48 3
UNIPROTKB|I3LQG8 - symbol:LOC100737278 "Uncharacterized p... 493 3.5e-46 1
UNIPROTKB|F1RIG2 - symbol:F1RIG2 "Uncharacterized protein... 169 1.5e-15 3
UNIPROTKB|K7ERA7 - symbol:UBE4B "Ubiquitin conjugation fa... 185 3.8e-13 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 137 5.1e-08 1
UNIPROTKB|K7EP75 - symbol:UBE4B "Ubiquitin conjugation fa... 132 4.3e-07 2
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 141 1.1e-06 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 137 2.3e-06 1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 141 2.3e-06 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 137 5.9e-06 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 137 6.0e-06 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 137 6.0e-06 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 137 6.0e-06 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 137 6.0e-06 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 137 6.8e-06 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 138 7.4e-06 2
ASPGD|ASPL0000001660 - symbol:AN5906 species:162425 "Emer... 135 9.2e-06 1
FB|FBgn0027052 - symbol:CHIP "CHIP" species:7227 "Drosoph... 121 0.00013 2
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 121 0.00026 1
DICTYBASE|DDB_G0282185 - symbol:DDB_G0282185 "U box domai... 132 0.00032 3
>TAIR|locus:2180862 [details] [associations]
symbol:AT5G15400 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 EMBL:AL391143 GO:GO:0034450
eggNOG:COG5113 KO:K10597 EMBL:BX832575 IPI:IPI00523200 PIR:T51518
RefSeq:NP_568313.2 UniGene:At.31807 HSSP:Q14139
ProteinModelPortal:Q9LF41 SMR:Q9LF41 PaxDb:Q9LF41 PRIDE:Q9LF41
ProMEX:Q9LF41 EnsemblPlants:AT5G15400.1 GeneID:831392
KEGG:ath:AT5G15400 TAIR:At5g15400 HOGENOM:HOG000240160
InParanoid:Q9LF41 OMA:CFFLTLT PhylomeDB:Q9LF41
ProtClustDB:CLSN2681049 Genevestigator:Q9LF41 Uniprot:Q9LF41
Length = 1038
Score = 1941 (688.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 392/570 (68%), Positives = 453/570 (79%)
Query: 1 MATTKPQRSPEEIEDIILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLSRDL 60
MAT+KPQRSP EIEDIILRKIF VTL E+T D+DPRI YLE+TAAE+LSEGK++ LSRDL
Sbjct: 1 MATSKPQRSPAEIEDIILRKIFYVTLTEST-DSDPRIVYLEMTAAEILSEGKELLLSRDL 59
Query: 61 MERVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMI 120
MERVL+DRLSG+F AEPPF YLI C+RRA+DE KKI +MKDKNLRSE+E V KQAKK+
Sbjct: 60 MERVLIDRLSGDFSDAEPPFPYLIGCHRRAYDESKKIQSMKDKNLRSEMEIVTKQAKKLA 119
Query: 121 VSYCRIHLANPDFFGXXXXXXXXXXXXXXXXXXXPLLPFIFAEVGGG-IDGFGNSTSSGS 179
VSYCRIHL NPD FG P+LP IFAEVG G +D FG S SSG
Sbjct: 120 VSYCRIHLGNPDMFGNSDKPSGGLDNRLKKRNVSPVLPLIFAEVGSGSLDMFGAS-SSGV 178
Query: 180 QCPPGFLKEFFEEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGV 239
Q PPGFL EFF+++DFD+LD ILK LYE+LR +V+NVS LG+FQ PLRAL YLVS PVG
Sbjct: 179 QAPPGFLDEFFKDSDFDSLDSILKELYEDLRSTVINVSVLGDFQPPLRALKYLVSLPVGA 238
Query: 240 KSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRR 299
KSLV+H+WW+P+ Y+NGR +E+TSILGPFFH+SALPD+ +FKSQPDVGQQCFSEAS RR
Sbjct: 239 KSLVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQCFSEASERR 298
Query: 300 PADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEP 359
PADLLSSF+TIK M LY L DVL+ LLK+TDTRE VL++LAEVIN N+SRAHIQV+P
Sbjct: 299 PADLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRERVLQFLAEVINANASRAHIQVDP 358
Query: 360 LSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEV 419
+SCASSGMFVNLSAVMLRLC+PFLD +LTKRDKIDPKY F RL L LTALHASSEEV
Sbjct: 359 VSCASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKYAFCGHRLKLSDLTALHASSEEV 418
Query: 420 SEWINKGNPAKADGSKHFSDGENQLLQSQEATSSSGGASEPSLPAGRPASIGGGKSKYPF 479
+EWI K A A+ + + E++LLQS+EATSSS AS G+ A +KY F
Sbjct: 419 TEWIGKDAMANANDAGRENGNESRLLQSKEATSSSSNAS------GQNAK---SATKYTF 469
Query: 480 ICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLEITRIE 539
ICECFFMTARVLNLGLLKA SDFKHL QDISR ED LATLKA + Q PS QL L+I+R+E
Sbjct: 470 ICECFFMTARVLNLGLLKALSDFKHLAQDISRGEDNLATLKAMRDQAPSPQLELDISRME 529
Query: 540 KEIELSSQEKLCYEAQILRD-DFMNFIIMF 568
KE+ELSSQEKLC+EAQILRD DF+ + F
Sbjct: 530 KELELSSQEKLCHEAQILRDGDFIQRALSF 559
Score = 1813 (643.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 348/423 (82%), Positives = 382/423 (90%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVR 618
DDFMNFIIMFMASP+Y+RNPYLR+KMVEVLNCWMPR S SSSAT+TLFEGHQ+SLEYLVR
Sbjct: 617 DDFMNFIIMFMASPEYVRNPYLRAKMVEVLNCWMPRSSSSSSATSTLFEGHQLSLEYLVR 676
Query: 619 NLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNF 678
NLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWR+IAK+EEKGVYLNF
Sbjct: 677 NLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRRIAKDEEKGVYLNF 736
Query: 679 LNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRID 738
LNFL+NDSIYLLDESLNKILE+K IEA+MSNTAEWE+RP QERQERTRLFHSQENI+RID
Sbjct: 737 LNFLVNDSIYLLDESLNKILEIKQIEADMSNTAEWEQRPTQERQERTRLFHSQENIVRID 796
Query: 739 MKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEF 798
MKLANEDV+MLAFTSE+I APFLLPEM+ERVA+MLNYFLLQLVGPQRKSL+LKDPEKYEF
Sbjct: 797 MKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEF 856
Query: 799 RPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQE 858
RPKQLLKQIV IYV+LARGDT N+FP AISSDGRSYNEQLF+A ADVL +IGE+GRIIQE
Sbjct: 857 RPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAGADVLRRIGEEGRIIQE 916
Query: 859 FIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHL 918
F+ELG LG+IPDEFLDPIQYTLM+DPVILPSSRITVDRP+IQRHL
Sbjct: 917 FMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRDPVILPSSRITVDRPIIQRHL 976
Query: 919 LSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRHGEGLNIQSIKDTIQTTNGDM 978
LSD DPFNR+HLT+DMLIP+ ELKAKI+EF+KS K+ G + S K+ IQTTN DM
Sbjct: 977 LSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSKKRTSGED-SSNKERIQTTNSDM 1035
Query: 979 LID 981
LID
Sbjct: 1036 LID 1038
>DICTYBASE|DDB_G0292264 [details] [associations]
symbol:nosA "U box domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 dictyBase:DDB_G0292264 GenomeReviews:CM000155_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:AAFI02000189 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
KO:K10597 OMA:NERICKS EMBL:AF044255 PIR:T14576 RefSeq:XP_629703.1
ProteinModelPortal:O44007 EnsemblProtists:DDB0216192 GeneID:8628617
KEGG:ddi:DDB_G0292264 InParanoid:O44007 ProtClustDB:CLSZ2728734
Uniprot:O44007
Length = 1089
Score = 783 (280.7 bits), Expect = 1.2e-119, Sum P(4) = 1.2e-119
Identities = 160/399 (40%), Positives = 249/399 (62%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVR 618
+ M F I +A+P+Y++NPYL++K++E+++ ++P S S L E +Q +++V
Sbjct: 697 EQLMKFFITILATPEYVKNPYLKAKIIEIISQFVP--SKYSKGNPILLECNQDVKDHMVL 754
Query: 619 NLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNF 678
L++ YVDIEFTG H QFY+KF+ RH + +L+YLW +P R + + K+ +++ F
Sbjct: 755 ALMRFYVDIEFTGGHNQFYEKFSYRHYSSLILKYLWSIPDFRKKFTETPKDP---IFIKF 811
Query: 679 LNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERR-PAQERQERTRLFHSQENIIRI 737
+N LINDSIY+LDE+L K+ ++K + + + W++ ++R+E+ E I +
Sbjct: 812 INMLINDSIYVLDEALAKLAKIKENQT-LFDDPNWDKDLTPEQRKEKIEQNDLNERICKS 870
Query: 738 DMKLANEDVSMLAFTSEQ--IVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEK 795
++ LAN ++ M+ F S I++ F+ PE+I+R+++M+NYFL +VGP+ +L +++PEK
Sbjct: 871 NLSLANSNIDMMLFLSSDKTIISGFMRPELIDRISAMMNYFLALIVGPKCTNLKVREPEK 930
Query: 796 YEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIG-EDGR 854
Y F PK LL Q+ IYV+ R D + F ++ DGRS+ LF +L + ++
Sbjct: 931 YHFNPKVLLNQLTEIYVNFGR-DPR--FLQSVVRDGRSFKNSLFQTCEKILQRERLKNDH 987
Query: 855 IIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVI 914
+ EF +L LGDIPDEF DPI TLM DPVILPSS+ +DR I
Sbjct: 988 ELDEFSKLVIKLEQVAKEEEQAEEDLGDIPDEFCDPILSTLMTDPVILPSSKTVIDRQTI 1047
Query: 915 QRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 953
RHLLSD TDPFNRSHLT +MLI + E K KI+E++ S+
Sbjct: 1048 LRHLLSDQTDPFNRSHLTPEMLIDDVETKKKIDEWLASK 1086
Score = 254 (94.5 bits), Expect = 1.2e-119, Sum P(4) = 1.2e-119
Identities = 72/248 (29%), Positives = 117/248 (47%)
Query: 185 FLKEFFEEADFDTLDPILKGLYENLRGSVLNVSAL-GNFQQPLRALLYLVSFPVGVKSLV 243
F+ +F E D L PI + ++ +L +L+ + L GN + LV F +V
Sbjct: 299 FIFKFLSEYQED-LTPIFEPIFLDLI-KILSTTTLTGNVFPYYKVFSRLVQFKAVSDLVV 356
Query: 244 NHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADL 303
Q W S NG+ +E +ILG F S+ D +Q FS AST +
Sbjct: 357 TLQCW--NSPNFNGKEMERNTILGSLFSPSSASDDG------STIKQYFSNASTMNKNTI 408
Query: 304 LSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLSC 362
+F +I+ + ++ L D+L LK + +E L +LA + +N R +QV+
Sbjct: 409 GDAFISIRQIQMNIHNGLVDLLKGFLKVQQENKEAFLSWLASAVEKNLERNKLQVDRTKA 468
Query: 363 ASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEVSEW 422
S G +NL AV++ LC+ F+D + +K +D ++ R D+ T L A+SEE +W
Sbjct: 469 CSDGFALNLCAVLVLLCEAFVDIDCSKVSMVDTNFLLSGKRHDITKDTRLCATSEEADQW 528
Query: 423 INKGNPAK 430
+ G K
Sbjct: 529 VKDGTIEK 536
Score = 113 (44.8 bits), Expect = 1.2e-119, Sum P(4) = 1.2e-119
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 17 ILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKD--MRLSRDLMERVLVDRLSGNFP 74
+L KIFL+ L + + + YL ++ E KD ++L + +++R+LV+RLS
Sbjct: 160 VLEKIFLIYL-QPNNNLPEKSIYLPSVNEQIKEEIKDGQLKLDKPVLDRILVERLSTKVQ 218
Query: 75 AAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIHLANPDFF 134
P YLI+C+ R +KK + + + ++K + ++++ Y + L PD F
Sbjct: 219 GV-PAVEYLISCFNRIQQTIKK-------KMAID-QQILKDSTELVLLYFGLVLTIPDMF 269
Score = 73 (30.8 bits), Expect = 1.2e-119, Sum P(4) = 1.2e-119
Identities = 23/95 (24%), Positives = 41/95 (43%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHL---VQDISRAEDTLATLKATQGQTPSSQL-NLE 534
FI E FF T R L++G+ + K + +QDI + L K TP +L +
Sbjct: 543 FITETFFSTLRALHIGINSTYEKLKLIGRNLQDIENNKRVLLDSKIKWQNTPQGRLFEGQ 602
Query: 535 ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMFM 569
+ + K+ ++ +AQ+ F+ F+
Sbjct: 603 LDLLTKKEDMLKGITYTIDAQLFEPTFLQKTASFL 637
>ASPGD|ASPL0000072757 [details] [associations]
symbol:AN10556 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:BN001303 GO:GO:0000151 GO:GO:0034450 OMA:CFFLTLT
EnsemblFungi:CADANIAT00006010 Uniprot:C8V8J9
Length = 1095
Score = 675 (242.7 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 151/422 (35%), Positives = 239/422 (56%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVL--NCWMPRRSGSSSATATLFEGHQMSLEYL 616
D+ + I F+ +YI+NPYL++ +V +L W PR G++ L + EYL
Sbjct: 685 DELVMMCIAFLECSEYIKNPYLKAGLVSILYRGTW-PRPGGATGVLVDLLNSMPFANEYL 743
Query: 617 VRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYL 676
+ + Y+ E TG+HTQFYDKFNIR+ I ++++ +W +R AK ++
Sbjct: 744 LHACMNFYIQAEHTGAHTQFYDKFNIRYEIFQIIKCVWPNTLYRAKLLNQAKHH-LDFFV 802
Query: 677 NFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIR 736
F+N L+ND Y+LDES + + E+ N PA +++ R+ +Q + +
Sbjct: 803 QFVNLLLNDVTYVLDESFGSFKTIYNTQLELRNEGA-SMDPAVRQEKEERVAQAQRSA-K 860
Query: 737 IDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKY 796
M+L NE V+ML +E + F +PE+++R+A ML+Y L +VGP+ +L +++ +Y
Sbjct: 861 SYMQLTNETVAMLKLFTEALADSFTMPEIVQRLADMLDYNLDAMVGPKSSNLRVENLHEY 920
Query: 797 EFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVL--WKIGEDGR 854
FRP+ LL +IV +Y++L QN F A++ DGRSY F AA++L W + +
Sbjct: 921 GFRPRALLSEIVDVYLNLM--GKQN-FIVAVARDGRSYKPANFEKAAEILRKWNL-KSPE 976
Query: 855 IIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVI 914
++ + +L LG+IPDEFLDP+ YTLM+DPVILP+S+I++DR +
Sbjct: 977 ELKRWDQLQLKVKEAKESDDQAEEDLGEIPDEFLDPLMYTLMEDPVILPASKISIDRSTL 1036
Query: 915 QRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRHGEGLNIQSIKDTIQTT 974
+ HLLSD DPFNR L + + P+T+LKAKIEEF + + +R Q D + T+
Sbjct: 1037 RAHLLSDPHDPFNRVPLKMEDVAPDTDLKAKIEEFKRQKIAERRAAQ---QGQVDQMDTS 1093
Query: 975 NG 976
G
Sbjct: 1094 TG 1095
Score = 227 (85.0 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 72/265 (27%), Positives = 128/265 (48%)
Query: 185 FLKEFFEEADFD-TLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF---PVGVK 240
FL E + + D T+ P E L L+ + + +P Y+ SF P ++
Sbjct: 279 FLSEAVKRFEEDETIKPAFIAAVEELSRE-LSSMGINDDYKP-----YVTSFSQLPQALR 332
Query: 241 SLVNHQWWIP----KSVYLNGR---VIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFS 293
+LV H S++ + R E ++LGP+F +S L Q D FS
Sbjct: 333 NLVRHSAIASAITESSIFNHTRDPASFEKETLLGPWFRLSPL--------QGDATMSFFS 384
Query: 294 EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSR 352
+R +L++ +I+ V L D+ D++ +++ + + R +L++ A +N N R
Sbjct: 385 APKSRDQGYILNAQRSIRMVQELLSSDILDIINHMVRASAEARNRILDWFAAALNINHKR 444
Query: 353 AHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTAL 412
+QV+P + +S G NL+ + LC PF+DAN TK D+ID +Y+ + R+D+R T +
Sbjct: 445 RAMQVDPATVSSDGFMFNLTTCLDHLCQPFMDANFTKIDRIDIEYLHRNPRVDMRDETKI 504
Query: 413 HASSEEVSEWINKGNPAKADGSKHF 437
+A + K K++G+ +F
Sbjct: 505 NADQHASDAFYAK----KSEGTSNF 525
Score = 122 (48.0 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 38/133 (28%), Positives = 69/133 (51%)
Query: 5 KPQRSPEEIEDIILRKIFLVTLNEATT-DAD-PRIAYLELTAAELLSEGKDMRLSRDLME 62
K + + E ED L +F +TL+E+ D R+ +L +EL + +R+S +++
Sbjct: 125 KQEDTLEAFEDRTLSAVFKLTLDESRQRDIHGQRLTFLSGLRSELEDQNLSLRISTAVLD 184
Query: 63 RVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVS 122
+ L++ S P +P YL+ C++R L K G K +N + E V+ +A+++ +S
Sbjct: 185 QALLEAASSQ-PDGKP-LDYLLPCWKRV-TRLHK-GFRKARNNDPKFE-VICEARRLCMS 239
Query: 123 YCRIHLANPDFFG 135
Y L P+ FG
Sbjct: 240 YAAFALTMPEMFG 252
Score = 73 (30.8 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 30/98 (30%), Positives = 47/98 (47%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPS--SQLNL--- 533
FI E FF+TA + G S L +D+ E TL L+A + + + +QL L
Sbjct: 525 FITEIFFLTAAAHHYGSESLTSKLDTLERDLKHMETTLVKLEAERPKWSNYPAQLRLFEI 584
Query: 534 EITRIEKEIELSSQEKLCYEAQ-ILRDDFMNFIIM-FM 569
++ R + ++++ K Y Q +L DD F M FM
Sbjct: 585 QLKRFKDKLDMGLALK--YSLQGVLFDDQWQFRSMTFM 620
Score = 39 (18.8 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 557 LRDDFMNFIIMFMASPKYIRN 577
+ DD+ ++ F P+ +RN
Sbjct: 313 INDDYKPYVTSFSQLPQALRN 333
>ZFIN|ZDB-GENE-020205-1 [details] [associations]
symbol:ube4b "ubiquitination factor E4B, UFD2 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
ZFIN:ZDB-GENE-020205-1 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:BX571850 IPI:IPI00996876
Ensembl:ENSDART00000126384 ArrayExpress:E7FEA3 Bgee:E7FEA3
Uniprot:E7FEA3
Length = 1362
Score = 700 (251.5 bits), Expect = 7.3e-92, Sum P(4) = 7.3e-92
Identities = 154/401 (38%), Positives = 229/401 (57%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVR 618
+D + F+I+F+ S YI+NPYL +K+VEVL P + + E H +S+ LV
Sbjct: 969 EDIVTFLIVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMLENHPLSVNQLVP 1028
Query: 619 NLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNF 678
L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H+ + + ++ ++ +
Sbjct: 1029 ALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQ--FVRY 1086
Query: 679 LNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRID 738
+N LIND+ +LLDESL + + I+ EM N +W+ P +++Q R E + R
Sbjct: 1087 INMLINDTTFLLDESLESLKRIHEIQEEMKNKEQWDLLPREQQQSRQSQLTQDERVSRSY 1146
Query: 739 MKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEF 798
+ LA E V M ++Q+ PFL PE+ R+A+MLNY L QL GP+ + L +++PEKY F
Sbjct: 1147 LALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGF 1206
Query: 799 RPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQ 857
PK+LL Q+ IY+ L D F AI+ D RSY+ +LF + K G I I+
Sbjct: 1207 EPKKLLDQLTDIYLQL---DCPR-FAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIE 1262
Query: 858 EFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRH 917
+F L D PDEF DP+ TLM DPV LPS I +DR +I RH
Sbjct: 1263 KFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNI-MDRSIILRH 1321
Query: 918 LLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
LL+ TDPFNR LT ML P ELK +I+ +++ + R+
Sbjct: 1322 LLNSPTDPFNRQPLTESMLEPVPELKERIQAWMREKQTGRY 1362
Score = 181 (68.8 bits), Expect = 7.3e-92, Sum P(4) = 7.3e-92
Identities = 70/256 (27%), Positives = 115/256 (44%)
Query: 182 PPGFLKEFFE--EADFDTLDPILKGLYENLRGSVLNVSA-LGNFQQPLRALLYLVSFPVG 238
P GF++E + D I + + L +V S NF+ PL AL L G
Sbjct: 557 PYGFIQELVRMTHQEEDVFKQIFVPILQGLALAVKECSFDSDNFKFPLMALAELCEIKFG 616
Query: 239 ----VKSLVNH-QWWIPKSVYLN-GRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCF 292
V +L+ W P + GR I+ S LG FF +S + VG + F
Sbjct: 617 KTHPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAE-----DDTKVGDKYF 671
Query: 293 S-EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSS 351
S A T ++S +++ + DL +L +L N +TRE L Y+A ++NRN
Sbjct: 672 SGPAITMENTRVVSQ--SLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVK 729
Query: 352 RAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDLR-SL 409
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ RL++
Sbjct: 730 KAQMQTDDKLVSTDGFMMNFLWVLQQL------SMKIKLETVDPLYIFHPKCRLNVSPEE 783
Query: 410 TALHASSEEVSEWINK 425
T L A+ EE+ W+ +
Sbjct: 784 TRLKATMEELKSWLTE 799
Score = 65 (27.9 bits), Expect = 7.3e-92, Sum P(4) = 7.3e-92
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAED-TLATLKATQGQTPSSQL--- 531
K+P ECFF+T +L +L + ++ I T+ LK ++ Q S L
Sbjct: 811 KFP--TECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNSRTVEELKNSENQWKDSPLAGR 868
Query: 532 NLE-ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMFMA 570
+ E + R + +++ + K C +A +L ++ + + F +
Sbjct: 869 HREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFS 908
Score = 53 (23.7 bits), Expect = 7.3e-92, Sum P(4) = 7.3e-92
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 1 MATTKPQRSPEEIEDIILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLS-RD 59
+A +P+ E++ L+ I + L + + D + +L AAE KD+ +D
Sbjct: 153 LAEKDSSSNPDVSEELALQLICKI-LRVSWKEQDRDVIFLPSLAAEFQKNPKDVYSDFKD 211
Query: 60 LMERVLVDRL 69
L+ ++L++ L
Sbjct: 212 LIGQILMEAL 221
Score = 41 (19.5 bits), Expect = 3.2e-77, Sum P(4) = 3.2e-77
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 269 FFHVSALPDHAIFKSQPDVGQQCFS 293
FF +S LP + + Q + G++ FS
Sbjct: 427 FFALSDLPQDSSDEEQEEEGEEDFS 451
Score = 39 (18.8 bits), Expect = 5.1e-77, Sum P(4) = 5.1e-77
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 453 SSGGASEPSLPAGRPASI 470
SS S PS+P PA++
Sbjct: 292 SSARLSAPSVPPASPAAL 309
>POMBASE|SPAC20H4.10 [details] [associations]
symbol:ufd2 "ubiquitin-protein ligase E4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 PomBase:SPAC20H4.10 GO:GO:0005634
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 KO:K10597 EMBL:AF059906 EMBL:AB027791 EMBL:AB032715
PIR:T43725 RefSeq:NP_593630.1 ProteinModelPortal:Q9HE05
MINT:MINT-4785000 STRING:Q9HE05 EnsemblFungi:SPAC20H4.10.1
GeneID:2542023 KEGG:spo:SPAC20H4.10 HOGENOM:HOG000188621
OMA:NERICKS OrthoDB:EOG4MPMZ8 NextBio:20803102 Uniprot:Q9HE05
Length = 1010
Score = 633 (227.9 bits), Expect = 8.5e-90, Sum P(4) = 8.5e-90
Identities = 139/396 (35%), Positives = 223/396 (56%)
Query: 564 FIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKL 623
F + F+ YI+NPYLR+K+ E+L + G S + +++ +L+ L+
Sbjct: 616 FCVSFLTQANYIKNPYLRAKLAEILYFGVQTHVGRSELLLDVVRTSKVATRWLLPALMAF 675
Query: 624 YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV--YLNFLNF 681
Y++IE TG TQFYDKFNIR I E+ +W+ P++ + ++ +E++ + ++ F+
Sbjct: 676 YIEIESTGQSTQFYDKFNIRFYICEVFRTIWKQPAY---FGKLEQEQKTNLPFFVKFVAL 732
Query: 682 LINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKL 741
++ND+ YLLDE+L K+ E+ +++ +++ Q QE + E +L
Sbjct: 733 MLNDATYLLDEALLKLTEIHNLQSLLADAIS-NSNSNQNVQESQSNLAAAERQASTYCQL 791
Query: 742 ANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPK 801
NE + ML + I F E+++R+A+MLNY L L GP+ +L ++DP KY F K
Sbjct: 792 GNETIFMLKLFTSSIPKAFCAVEIVDRLAAMLNYNLQALCGPKCSNLKVEDPTKYHFNAK 851
Query: 802 QLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK----IGEDGRIIQ 857
LL I +Y++L + F A++ DGRSY++++F A ++ K D I+
Sbjct: 852 TLLSIIFDVYLNLCN---EPAFVEAVAHDGRSYSKEIFERATSIMTKHNLKSSFDIEAIK 908
Query: 858 EFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRH 917
EF+ +GDIPD FLDP+ +T+MKDPV+LP S I++DR I+ H
Sbjct: 909 EFVN---RVEAFRLQEATEEEDMGDIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKAH 965
Query: 918 LLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 953
LLSDATDPFNR+ LT D + PN L+ +I F+KS+
Sbjct: 966 LLSDATDPFNRTPLTLDDVTPNDTLREEINTFLKSK 1001
Score = 241 (89.9 bits), Expect = 8.5e-90, Sum P(4) = 8.5e-90
Identities = 81/266 (30%), Positives = 136/266 (51%)
Query: 182 PPGFLKEFFEEADFDTLD----PILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF-P 236
P FL EF + + + LD P+L+ L +L+ ++NV + ++ +L LVS P
Sbjct: 209 PLEFLSEFVQRFEHENLDELFIPVLESL--SLKIGLMNVDTVQ--MNVMQIILQLVSLKP 264
Query: 237 VGVKSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEAS 296
+ + L W P + N IE + LG +S+L ++F DV + FS ++
Sbjct: 265 IALL-LPKLPSWNPTN---NAGEIEYKTFLG---RISSL---SVFTQ--DVASRYFSNST 312
Query: 297 TRRPADLLSSFTTIKTVMRGLYKD-LGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAH 354
R ++ SS +++K M Y+D L + L++ +T RE+VL++ A V+N N R
Sbjct: 313 ERSAQNISSSISSLKLTM-STYQDVLFQIFNTLIRTSTSLRESVLDFFAMVVNANHKRQS 371
Query: 355 IQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHA 414
IQV S +N S V+ RL +PFLD +K D++ +Y + R+D++ T L+A
Sbjct: 372 IQVNHFDITSDACMLNFSHVLSRLSEPFLDIGCSKIDRVQVEYFRRNPRVDIKEETKLNA 431
Query: 415 SSEEVSEWINKGNPAKADGSKHF-SD 439
+ + +K PA +GS +F SD
Sbjct: 432 DQKASESFYSK--PA--EGSNNFISD 453
Score = 84 (34.6 bits), Expect = 8.5e-90, Sum P(4) = 8.5e-90
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQ----GQTPSSQLNLE 534
FI + FF+ + G+ F + LVQ I +E L+ Q G +++L +
Sbjct: 450 FISDIFFLNLAFHHYGVNATFKALEQLVQSIRDSEKLKERLETEQQNMSGSFQATRLTAQ 509
Query: 535 ITRIEKEIELSSQEKLCYEAQILRDD-------FMNFIIMFMA 570
++R+++ ++L CYE + + F+NF+ ++++
Sbjct: 510 LSRLDQRLDLDRSFVHCYEIMLTQTSDTSRSFSFLNFVAIWLS 552
Score = 78 (32.5 bits), Expect = 8.5e-90, Sum P(4) = 8.5e-90
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 26 LNEATTDADPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRLSGNFPAAEPPFLYLIN 85
LN ++ D YLE +L EG + + + ++ L+ RLS F YL+
Sbjct: 89 LNITLSETDSSKYYLEGFKKDLEEEGSPLLFNENNVDSALLSRLS---TTGNNTFSYLLQ 145
Query: 86 CYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIHLANPDFF 134
+ + K++ KD+N ++ + K ++VSY I + PD F
Sbjct: 146 SWSFLYQYKKRLP--KDENQDFKIH-YLSLLKSLLVSYAGIVVMLPDTF 191
>FB|FBgn0028467 [details] [associations]
symbol:CG11070 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK EMBL:AF181657
RefSeq:NP_609060.1 UniGene:Dm.331 SMR:Q9U4F8
EnsemblMetazoa:FBtr0079297 GeneID:33932 KEGG:dme:Dmel_CG11070
UCSC:CG11070-RA FlyBase:FBgn0028467 InParanoid:Q9U4F8
OrthoDB:EOG495X6S GenomeRNAi:33932 NextBio:785986 Uniprot:Q9U4F8
Length = 993
Score = 744 (267.0 bits), Expect = 1.8e-89, Sum P(4) = 1.8e-89
Identities = 164/406 (40%), Positives = 244/406 (60%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRR-SGSSSAT--ATLFEGHQMSLEY 615
D F II+FM S ++NP+LR+K+ E L +P R GS T + +F+ H L+
Sbjct: 587 DAFFKMIILFMGSSALVKNPHLRAKLAEALEFLLPSRIMGSHRKTFVSHVFDNHPDRLK- 645
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKG-- 673
+VR+LL ++V IE TG QF KFN R + ++E+LW P H +R +A E E+
Sbjct: 646 VVRSLLNVFVSIEMTGQSVQFEQKFNYRRPMYAIMEFLWTKPEHVQCFRDLAVEAEQNMD 705
Query: 674 -----VYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQER-TRL 727
++L F+N LIND+I+LLDESL+ + ++K ++ N EWE P ER++ T L
Sbjct: 706 AIEPPIFLRFINLLINDAIFLLDESLSNLEQIKQLQQAQDN-GEWESLPHTEREQHMTNL 764
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
H + R D + + +++L + +I + F M++R+A+MLNYFLL LVGP+++
Sbjct: 765 QHLGM-LARFDNIIGRDTINLLKLLTSKIKSIFCHNSMVDRMAAMLNYFLLNLVGPKKER 823
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
+KD +++EF P Q + +I IY++L+ ++ F A+S DGRSY+EQLFS A ++L
Sbjct: 824 FKVKDKKEFEFDPAQTVIEISHIYINLSSDES---FCLAVSQDGRSYSEQLFSYAENILI 880
Query: 848 KIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRI 907
+IG G++I + E L D P+E+LDPI TLM DPV+LPSS++
Sbjct: 881 RIG-GGQLIGDMSEFAVKVARMGAQYKEEQELLADAPEEYLDPIISTLMTDPVVLPSSKV 939
Query: 908 TVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 953
TVDR I RHLLSD TDPFNR LT D + N LK +IE +I+ +
Sbjct: 940 TVDRSTIARHLLSDQTDPFNREPLTMDKVKSNEALKQEIESWIQGK 985
Score = 83 (34.3 bits), Expect = 1.8e-89, Sum P(4) = 1.8e-89
Identities = 41/166 (24%), Positives = 77/166 (46%)
Query: 262 MTSILGPFFHVSALPDHAIFKSQPDVGQ-QCFSEASTRRPADLLSSFTTIKTVMRGLYKD 320
M ++LG +S LP K+Q G+ + F E S + + L + + + ++
Sbjct: 247 MDTLLGSLLCISILP-----KTQ--TGKYEFFQELSINQTDEAL--WALLSHHQQSIFL- 296
Query: 321 LGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHI------QVEPL--SCASSGMFVNLS 372
L LL L + +T++ L+++ ++ N R H+ +E S +S NL+
Sbjct: 297 LVKQLLVL--SPETKKKTLQWVGNCLDANVPRGHLWSSINASLEQTAHSTSSDAFMTNLT 354
Query: 373 AVMLRLCDPFLDANLTKRDKIDPKYVFYSSR-LDLRSLTALHASSE 417
AV++RLC P +L K +DP Y ++ + ++ L A +E
Sbjct: 355 AVLVRLCAPLCMPSL-KVLLVDPTYCAVPNKDRQAKGVSMLRAHAE 399
Score = 55 (24.4 bits), Expect = 1.8e-89, Sum P(4) = 1.8e-89
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 17 ILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++ ++ L TLN+A++ A L A+++ E + LS DL+ L +RL
Sbjct: 26 LVEEVLLFTLNKASSSA-------VLCLADVVVETSEEMLSEDLVAHALFERL 71
Score = 53 (23.7 bits), Expect = 1.8e-89, Sum P(4) = 1.8e-89
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAE 513
KY F+ E F+MT + L + F +++++ +
Sbjct: 416 KYNFVTEIFYMTHKCFELSNIPCIERFVRVLRELQNTQ 453
Score = 38 (18.4 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 13/65 (20%), Positives = 26/65 (40%)
Query: 191 EEADFDTLDPILKGLYENLRGSVLNVSALGN-FQQPLRALLYLVSFPVGVKSLVNHQWWI 249
E + D + K L+ +R + V + N +P + YL+ F + +
Sbjct: 458 EIVNSDPNSEVAKNLFRMIRDQIQQVLTIKNTLAEPTNDM-YLLKFFEASAIWLTEIAML 516
Query: 250 PKSVY 254
P+ +Y
Sbjct: 517 PREIY 521
>RGD|1304738 [details] [associations]
symbol:Ube4b "ubiquitination factor E4B" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0003222
"ventricular trabecula myocardium morphogenesis" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0009411 "response
to UV" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA;ISO] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=ISO] [GO:0044257 "cellular protein catabolic
process" evidence=ISO] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 RGD:1304738
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00359635
PRIDE:F1M8V2 Ensembl:ENSRNOT00000055572 ArrayExpress:F1M8V2
Uniprot:F1M8V2
Length = 1172
Score = 691 (248.3 bits), Expect = 3.5e-87, Sum P(4) = 3.5e-87
Identities = 152/412 (36%), Positives = 232/412 (56%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 768 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIE 827
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 828 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 887
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R
Sbjct: 888 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNQEQWDQLPRDQQQARQSQ 945
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 946 LAQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1005
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1006 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1061
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSR 906
K G I I++F L D PDEF DP+ TLM DPV LPS
Sbjct: 1062 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT 1121
Query: 907 ITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I +DR +I RHLL+ TDPFNR LT ML P ELK +I+ +++ + H
Sbjct: 1122 I-MDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSSDH 1172
Score = 177 (67.4 bits), Expect = 3.5e-87, Sum P(4) = 3.5e-87
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL + L+ F+ PL AL L
Sbjct: 368 PYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSLDSDY---FKYPLMALGELCET 424
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G + +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 425 KFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 484
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A ++N N
Sbjct: 485 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAIVNAN 538
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +NL V+ +L + K + +DP Y+F+ R+ L
Sbjct: 539 MKKAQMQADDRLVSTDGFMLNLLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 592
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V+EW+ +
Sbjct: 593 DETRINATMEDVNEWLTE 610
Score = 72 (30.4 bits), Expect = 3.5e-87, Sum P(4) = 3.5e-87
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 622 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 679
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 680 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 716
Score = 41 (19.5 bits), Expect = 3.5e-87, Sum P(4) = 3.5e-87
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 299 YLIECFDRVGIEEKKAPKMCSQPAVSQL 326
Score = 39 (18.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 192 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 224
>UNIPROTKB|F1M9N5 [details] [associations]
symbol:Ube4a "Ubiquitin conjugation factor E4 A"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00369411
PRIDE:F1M9N5 Ensembl:ENSRNOT00000021321 ArrayExpress:F1M9N5
Uniprot:F1M9N5
Length = 1066
Score = 711 (255.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 158/402 (39%), Positives = 234/402 (58%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY----- 615
++FI +F S + ++NP+LR+K+ EVL MP + S +++F ++ +
Sbjct: 658 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKRVFCNFPYAPQ 717
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L Y+W S+R + + +A K +
Sbjct: 718 LSEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKDLADYASKNLE 777
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EWE + R+E+
Sbjct: 778 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWESLTPEARREKEAGL 836
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + L+F + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 837 QMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 896
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 897 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 953
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 954 INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVT 1013
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 1014 VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
Score = 102 (41.0 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGFFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDL-RSLTALH 413
F+NL A +L+LC PF ++ +P Y D R + ++H
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCVLKDLNDEERKIKSVH 481
Score = 61 (26.5 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 17 ILRKIFLVTLNEATTDAD-----P-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + P R YLE A EL E +D L +E+ + RL
Sbjct: 87 MIQRIFLITLDNSDPNLKSGNGIPSRCVYLEEMAVEL--EDQDW-LDMSNVEQAIFARL 142
>UNIPROTKB|Q14139 [details] [associations]
symbol:UBE4A "Ubiquitin conjugation factor E4 A"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005737 Reactome:REACT_6900 EMBL:CH471065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
GO:GO:0034450 eggNOG:COG5113 CTD:9354 HOGENOM:HOG000007049
HOVERGEN:HBG059871 KO:K10596 OMA:DRDAGEK EMBL:D50916 EMBL:EF445042
EMBL:BC052643 EMBL:BC062695 EMBL:BC111417 EMBL:BC112367
IPI:IPI00028957 IPI:IPI00556075 RefSeq:NP_001191006.1
RefSeq:NP_004779.2 UniGene:Hs.602967 UniGene:Hs.75275 PDB:1WGM
PDBsum:1WGM ProteinModelPortal:Q14139 SMR:Q14139 IntAct:Q14139
STRING:Q14139 PhosphoSite:Q14139 DMDM:71164791 PaxDb:Q14139
PRIDE:Q14139 Ensembl:ENST00000252108 Ensembl:ENST00000431736
GeneID:9354 KEGG:hsa:9354 UCSC:uc001psv.3 UCSC:uc001psw.3
GeneCards:GC11P118264 HGNC:HGNC:12499 MIM:603753 neXtProt:NX_Q14139
PharmGKB:PA37147 InParanoid:Q14139 ChiTaRS:UBE4A
EvolutionaryTrace:Q14139 GenomeRNAi:9354 NextBio:35029
PMAP-CutDB:B0YJB6 ArrayExpress:Q14139 Bgee:Q14139 CleanEx:HS_UBE4A
Genevestigator:Q14139 GermOnline:ENSG00000110344 Uniprot:Q14139
Length = 1066
Score = 709 (254.6 bits), Expect = 7.4e-86, Sum P(4) = 7.4e-86
Identities = 157/402 (39%), Positives = 236/402 (58%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY--- 615
++FI +F S + ++NP+LR+K+ EVL MP + + +++F ++ + +Y
Sbjct: 658 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQ 717
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L Y+W ++R + + +A K +
Sbjct: 718 LAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLE 777
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 778 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGL 836
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 837 QMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 896
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 897 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 953
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 954 INKPGNMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVT 1013
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 1014 VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
Score = 99 (39.9 bits), Expect = 7.4e-86, Sum P(4) = 7.4e-86
Identities = 53/227 (23%), Positives = 93/227 (40%)
Query: 185 FLKEFFEEADFD----TLDPILKGLYENLRGSVLNVSALGNFQQP-LRALLYLVSFPVGV 239
FL+E E D T ++ +++ L G + ++ L LLY
Sbjct: 248 FLEEVIEALILDEEVRTFPEVMIPVFDILLGRIKDLELCQILLYAYLDILLYFTRQKDMA 307
Query: 240 KSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEAST 297
K V ++ PK NG++ + T +LG +S L K+ P V + F S
Sbjct: 308 KVFV--EYIQPKDP-TNGQMYQKT-LLGVILSISCL-----LKT-PGVVENHGYFLNPSR 357
Query: 298 RRPADLLSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQ 356
P ++ I M ++ + +L LL+ + +T+ +L +L ++ N+ R I
Sbjct: 358 SSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIW 417
Query: 357 VEPLS------CASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
+ AS F+NL A +L+LC PF ++ +P Y
Sbjct: 418 ANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 61 (26.5 bits), Expect = 7.4e-86, Sum P(4) = 7.4e-86
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 50 (22.7 bits), Expect = 7.4e-86, Sum P(4) = 7.4e-86
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A EL E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVEL--EDQDW-L 129
Query: 57 SRDLMERVLVDRL 69
+E+ L RL
Sbjct: 130 DMSNVEQALFARL 142
>UNIPROTKB|E2RPU3 [details] [associations]
symbol:UBE4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450 CTD:9354
GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK
EMBL:AAEX03003449 RefSeq:XP_850081.1 Ensembl:ENSCAFT00000038039
GeneID:479418 KEGG:cfa:479418 NextBio:20854604 Uniprot:E2RPU3
Length = 1066
Score = 707 (253.9 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 156/402 (38%), Positives = 234/402 (58%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY----- 615
++FI +F S + ++NP+LR+K+ EVL MP + + +++F ++ +
Sbjct: 658 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFPHAPH 717
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L Y+W ++R + + +A K +
Sbjct: 718 LAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLE 777
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 778 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGL 836
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 837 QMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 896
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 897 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 953
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 954 INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVT 1013
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 1014 VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
Score = 105 (42.0 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 54/227 (23%), Positives = 95/227 (41%)
Query: 185 FLKEFFEEADFD----TLDPILKGLYENLRGSVLNVSALGN-FQQPLRALLYLVSFPVGV 239
FL+E E D T ++ +++ L G + ++ F L LLY
Sbjct: 248 FLEEVIEALIMDEEVRTFPEVMIPVFDILLGRIKDLELCQILFYAYLDILLYFTRQKDMA 307
Query: 240 KSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEAST 297
K V ++ PK NG++ + T +LG ++S L K+ P V + F S
Sbjct: 308 KVFV--EYIQPKDPS-NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGYFLNPSR 357
Query: 298 RRPADLLSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQ 356
P ++ I M ++ + +L LL+ + +T+ +L +L ++ N+ R I
Sbjct: 358 SSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIW 417
Query: 357 VEPLS------CASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
+ AS F+NL A +L+LC PF ++ +P Y
Sbjct: 418 ANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 61 (26.5 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 45 (20.9 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A +L E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDL--EDQDW-L 129
Query: 57 SRDLMERVLVDRL 69
+ +E+ + RL
Sbjct: 130 DMNNVEQAVFARL 142
>UNIPROTKB|J9P2H4 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 CTD:10277 KO:K10597 EMBL:AAEX03003938
RefSeq:XP_849824.2 Ensembl:ENSCAFT00000046848 GeneID:479603
KEGG:cfa:479603 Uniprot:J9P2H4
Length = 1173
Score = 689 (247.6 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 152/412 (36%), Positives = 232/412 (56%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 769 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE 828
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 829 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 888
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R
Sbjct: 889 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQ 946
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 947 LAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1006
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1007 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1062
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSR 906
K G I I++F L D PDEF DP+ TLM DPV LPS
Sbjct: 1063 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT 1122
Query: 907 ITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I +DR +I RHLL+ TDPFNR LT +ML P ELK +I +++ + H
Sbjct: 1123 I-MDRSIILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIHAWMREKQNSDH 1173
Score = 168 (64.2 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 369 PYGFMQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 425
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 426 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 485
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 486 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 539
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 540 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 593
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 594 DETRVNATMEDVNDWL 609
Score = 72 (30.4 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 623 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 680
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 681 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 717
Score = 41 (19.5 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 300 YLIECFDRVGIEEKKAPKMCSQPAVSQL 327
Score = 39 (18.8 bits), Expect = 3.3e-66, Sum P(2) = 3.3e-66
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 193 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 225
>UNIPROTKB|F1SAK7 [details] [associations]
symbol:UBE4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:CU914235
Ensembl:ENSSSCT00000016461 Uniprot:F1SAK7
Length = 1067
Score = 707 (253.9 bits), Expect = 2.9e-85, Sum P(4) = 2.9e-85
Identities = 156/402 (38%), Positives = 234/402 (58%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY----- 615
++FI +F S + ++NP+LR+K+ EVL MP + + +++F ++ +
Sbjct: 658 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFAYAAH 717
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L Y+W ++R + + +A K +
Sbjct: 718 LAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDNYRESIKDLADYASKNLE 777
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 778 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGL 836
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 837 QMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 896
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 897 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 953
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 954 INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVT 1013
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 1014 VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
Score = 100 (40.3 bits), Expect = 2.9e-85, Sum P(4) = 2.9e-85
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGYFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MARFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF ++ +P Y
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 61 (26.5 bits), Expect = 2.9e-85, Sum P(4) = 2.9e-85
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 46 (21.3 bits), Expect = 2.9e-85, Sum P(4) = 2.9e-85
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A +L E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDL--EDQDW-L 129
Query: 57 SRDLMERVLVDRL 69
+ +E+ + RL
Sbjct: 130 DMNNVEQAVFTRL 142
>RGD|1303173 [details] [associations]
symbol:Ube4a "ubiquitination factor E4A" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA;ISO] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
eggNOG:COG5113 CTD:9354 HOVERGEN:HBG059871 KO:K10596
OrthoDB:EOG4CRKZ8 EMBL:BC061761 IPI:IPI00369411 RefSeq:NP_997493.1
UniGene:Rn.102204 ProteinModelPortal:Q6P7A2 SMR:Q6P7A2
STRING:Q6P7A2 PRIDE:Q6P7A2 GeneID:315608 KEGG:rno:315608
UCSC:RGD:1303173 InParanoid:Q6P7A2 NextBio:669506
ArrayExpress:Q6P7A2 Genevestigator:Q6P7A2
GermOnline:ENSRNOG00000026833 Uniprot:Q6P7A2
Length = 1066
Score = 704 (252.9 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 157/402 (39%), Positives = 233/402 (57%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY----- 615
++FI +F S + ++NP+LR+K+ EVL MP + S +++F ++ +
Sbjct: 658 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKRVFCNFPYAPQ 717
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L Y+W S+R + + +A K +
Sbjct: 718 LSEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKDLADYASKNLE 777
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EWE + R+E+
Sbjct: 778 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWESLTPEARREKEAGL 836
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + L+F + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 837 QMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 896
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 897 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 953
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 954 INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVT 1013
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VD I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 1014 VDGSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
Score = 102 (41.0 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGFFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDL-RSLTALH 413
F+NL A +L+LC PF ++ +P Y D R + ++H
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCVLKDLNDEERKIKSVH 481
Score = 61 (26.5 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 46 (21.3 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 17 ILRKIFLVTLNEATTDAD-----P-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + P R YLE A EL E +D L +E+ + RL
Sbjct: 87 MIQRIFLITLDNSDPNLKSGNGIPSRCVYLEEMAVEL--EDQDW-LDMSNVEQAIFARL 142
>UNIPROTKB|O95155 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0009411 "response to UV" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=TAS] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
EMBL:AF043117 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 GO:GO:0019899 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0042787
GO:GO:0034976 GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
EMBL:AL590639 PDB:3L1Z PDBsum:3L1Z EMBL:AB028839 EMBL:AF331520
EMBL:AB014584 EMBL:AL096841 EMBL:BC093696 EMBL:AF091093
IPI:IPI00005715 IPI:IPI00555735 IPI:IPI00655534 PIR:T00358
RefSeq:NP_001099032.1 RefSeq:NP_006039.2 UniGene:Hs.593974 PDB:2KRE
PDB:3L1X PDBsum:2KRE PDBsum:3L1X ProteinModelPortal:O95155
SMR:O95155 DIP:DIP-40309N IntAct:O95155 MINT:MINT-2798575
STRING:O95155 PhosphoSite:O95155 PaxDb:O95155 PRIDE:O95155
Ensembl:ENST00000253251 Ensembl:ENST00000343090
Ensembl:ENST00000377157 GeneID:10277 KEGG:hsa:10277 UCSC:uc001aqr.4
UCSC:uc001aqs.4 CTD:10277 GeneCards:GC01P010092 HGNC:HGNC:12500
HPA:HPA019219 MIM:613565 neXtProt:NX_O95155 PharmGKB:PA37148
HOGENOM:HOG000294109 HOVERGEN:HBG058129 InParanoid:O95155 KO:K10597
OMA:TCKETEM ChiTaRS:UBE4B EvolutionaryTrace:O95155 GenomeRNAi:10277
NextBio:38932 PMAP-CutDB:O95155 ArrayExpress:O95155 Bgee:O95155
CleanEx:HS_UBE4B Genevestigator:O95155 GermOnline:ENSG00000130939
Uniprot:O95155
Length = 1302
Score = 687 (246.9 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 149/400 (37%), Positives = 227/400 (56%)
Query: 560 DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRN 619
D + F+++ + + YIRNPYL +K+VEV+ P + + E H +S + LV +
Sbjct: 910 DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS 969
Query: 620 LLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFL 679
L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + + ++ ++ ++
Sbjct: 970 LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYI 1027
Query: 680 NFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDM 739
N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E + R +
Sbjct: 1028 NMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYL 1087
Query: 740 KLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFR 799
LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F
Sbjct: 1088 ALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFE 1147
Query: 800 PKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQE 858
PK+LL Q+ IY+ L D F AI+ D RSY+++LF + K G I I++
Sbjct: 1148 PKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEK 1203
Query: 859 FIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHL 918
F L D PDEF DP+ TLM DPV LPS I +DR +I RHL
Sbjct: 1204 FKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHL 1262
Query: 919 LSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
L+ TDPFNR LT ML P ELK +I+ +++ + H
Sbjct: 1263 LNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302
Score = 176 (67.0 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 70/258 (27%), Positives = 121/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 498 PYGFIQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 554
Query: 236 PVG----VKSLV-NHQWWIPKSVYLN-GRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + + W+PKS+ GR ++ S LG FF S + + +
Sbjct: 555 KFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVEKYFSG 614
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 615 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAVVNAN 668
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 669 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 722
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V++W+ +
Sbjct: 723 DETRVNATMEDVNDWLTE 740
Score = 72 (30.4 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 752 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 809
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 810 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 846
Score = 45 (20.9 bits), Expect = 3.3e-70, Sum P(3) = 3.3e-70
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 408 SLTALHASSEEV--SEW--INKGNPAKADGSKHFSD--GENQLLQSQEATSSSGGASEPS 461
SL++L+ SS S W + P+ A S+ S + L A S + S+PS
Sbjct: 267 SLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPS 326
Query: 462 LPAGRPASI 470
P RP ++
Sbjct: 327 SPRYRPYTV 335
Score = 41 (19.5 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 429 YLIECFDRVGIEEKKAPKMCSQPAVSQL 456
Score = 39 (18.8 bits), Expect = 1.7e-65, Sum P(2) = 1.7e-65
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 193 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 225
>UNIPROTKB|F1NGY1 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000209 GO:GO:0000151 GO:GO:0034976 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AADN02040784
IPI:IPI00594565 Ensembl:ENSGALT00000004175 Uniprot:F1NGY1
Length = 1182
Score = 680 (244.4 bits), Expect = 5.2e-85, Sum P(4) = 5.2e-85
Identities = 151/408 (37%), Positives = 232/408 (56%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 777 YAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE 836
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 837 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 896
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W+ P ++Q R
Sbjct: 897 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQ 954
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 955 LAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1014
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1015 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1070
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSR 906
K G I I++F L D PDEF DP+ TLM DPV LPS
Sbjct: 1071 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT 1130
Query: 907 ITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNT-ELKAKIEEFIKSQ 953
I +DR +I RHLL+ +TDPFNR LT +ML P ELK +I+ +++ +
Sbjct: 1131 I-MDRSIILRHLLNSSTDPFNRQTLTENMLEPVVPELKEQIQAWMRDK 1177
Score = 187 (70.9 bits), Expect = 5.2e-85, Sum P(4) = 5.2e-85
Identities = 74/257 (28%), Positives = 123/257 (47%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL + L+ NF+ PL AL L
Sbjct: 377 PFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSD---NFKYPLMALCELCEI 433
Query: 236 PVG----VKSLV-NHQWWIPKSVYLN-GRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G + SLV + W+PKS+ GR ++ S LG FF +S + V +
Sbjct: 434 KFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAE-----DDNKVVE 488
Query: 290 QCFS-EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINR 348
+ FS A T ++S +++ + ++L +L ++L N +TRE L Y+A V+N
Sbjct: 489 KYFSGPAITLENTRVVSQ--SLQHYLELARQELFKILHSILLNGETREAALSYMAAVVNA 546
Query: 349 NSSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDLR 407
N +A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+DL
Sbjct: 547 NMKKAQMQTDDRLVSTDGFMLNFLWVLQQL------SMKIKLETVDPMYIFHPRCRIDLP 600
Query: 408 S-LTALHASSEEVSEWI 423
+ T + A+ E+V+ WI
Sbjct: 601 TDETRVKATMEDVTAWI 617
Score = 73 (30.8 bits), Expect = 5.2e-85, Sum P(4) = 5.2e-85
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 631 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 688
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L ++F+ + F
Sbjct: 689 REMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNF 725
Score = 38 (18.4 bits), Expect = 5.2e-85, Sum P(4) = 5.2e-85
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E +K M + S+L
Sbjct: 308 YLIECFDRVGIEERKAPKMCSQPTVSQL 335
Score = 38 (18.4 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 497 KAFSDFKHLVQDI----------SRAEDTLATLKAT 522
+ FSDFK L+ I SR E+ A+L AT
Sbjct: 201 EVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTAT 236
>UNIPROTKB|F1P7I0 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:AAEX03003938
Ensembl:ENSCAFT00000031485 Uniprot:F1P7I0
Length = 1312
Score = 689 (247.6 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 152/412 (36%), Positives = 232/412 (56%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 908 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE 967
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 968 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 1027
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R
Sbjct: 1028 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQ 1085
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 1086 LAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1145
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1146 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1201
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSR 906
K G I I++F L D PDEF DP+ TLM DPV LPS
Sbjct: 1202 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT 1261
Query: 907 ITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I +DR +I RHLL+ TDPFNR LT +ML P ELK +I +++ + H
Sbjct: 1262 I-MDRSIILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIHAWMREKQNSDH 1312
Score = 168 (64.2 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 508 PYGFMQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 564
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 565 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 624
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 625 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 678
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 679 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 732
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 733 DETRVNATMEDVNDWL 748
Score = 72 (30.4 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 762 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 819
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 820 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 856
Score = 41 (19.5 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 439 YLIECFDRVGIEEKKAPKMCSQPAVSQL 466
Score = 39 (18.8 bits), Expect = 8.2e-66, Sum P(2) = 8.2e-66
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 193 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 225
>UNIPROTKB|J9P9M3 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AAEX03003938
Ensembl:ENSCAFT00000046404 Uniprot:J9P9M3
Length = 1360
Score = 689 (247.6 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 152/412 (36%), Positives = 232/412 (56%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 956 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE 1015
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 1016 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 1075
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R
Sbjct: 1076 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQ 1133
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 1134 LAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1193
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1194 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1249
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSR 906
K G I I++F L D PDEF DP+ TLM DPV LPS
Sbjct: 1250 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT 1309
Query: 907 ITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I +DR +I RHLL+ TDPFNR LT +ML P ELK +I +++ + H
Sbjct: 1310 I-MDRSIILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIHAWMREKQNSDH 1360
Score = 168 (64.2 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 556 PYGFMQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 612
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 613 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 672
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 673 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 726
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 727 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 780
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 781 DETRVNATMEDVNDWL 796
Score = 72 (30.4 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 810 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 867
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 868 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 904
Score = 41 (19.5 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 487 YLIECFDRVGIEEKKAPKMCSQPAVSQL 514
Score = 39 (18.8 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 191 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 223
Score = 37 (18.1 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 442 NQLLQSQEATSSSGGASEPSLPAGRPASIGGGKSKY--PF 479
+ L Q + A+ PS + RP+S+ S Y PF
Sbjct: 374 SSLRQRPSSLGPPSVAASPSAVSRRPSSLRISPSMYDNPF 413
>UNIPROTKB|A6QNS2 [details] [associations]
symbol:UBE4B "UBE4B protein" species:9913 "Bos taurus"
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0034976
GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
GeneTree:ENSGT00390000009300 CTD:10277 HOGENOM:HOG000294109
HOVERGEN:HBG058129 KO:K10597 OMA:TCKETEM EMBL:DAAA02042992
EMBL:BC148970 IPI:IPI00691225 RefSeq:NP_001095974.1
UniGene:Bt.17976 STRING:A6QNS2 Ensembl:ENSBTAT00000013729
GeneID:520833 KEGG:bta:520833 InParanoid:A6QNS2 OrthoDB:EOG4C87RK
NextBio:20873187 Uniprot:A6QNS2
Length = 1362
Score = 688 (247.2 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 152/412 (36%), Positives = 231/412 (56%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 958 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE 1017
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 1018 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 1077
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R
Sbjct: 1078 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQ 1135
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 1136 LAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1195
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1196 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1251
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSR 906
K G I I++F L D PDEF DP+ TLM DPV LPS
Sbjct: 1252 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT 1311
Query: 907 ITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I +DR +I RHLL+ TDPFNR LT ML P ELK +I +++ + H
Sbjct: 1312 I-MDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIHAWMREKQNSDH 1362
Score = 170 (64.9 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 558 PYGFIQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 614
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 615 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 674
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 675 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAVVNAN 728
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 729 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 782
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 783 DETRVNATMEDVNDWL 798
Score = 72 (30.4 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 812 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 869
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 870 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 906
Score = 41 (19.5 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 489 YLIECFDRVGIEEKKAPKMCSQPAVSQL 516
Score = 40 (19.1 bits), Expect = 1.1e-69, Sum P(3) = 1.1e-69
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 452 SSSGGASEPSLPAGRPASIGGGKSKY--PF 479
S+S G S PS RP+S+ S Y PF
Sbjct: 389 SASPGGSAPSR---RPSSLRNSPSMYDSPF 415
Score = 39 (18.8 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 193 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 225
>UNIPROTKB|F1M8D6 [details] [associations]
symbol:Ube4b "Protein Ube4b" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 RGD:1304738 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0031175 GO:GO:0000209 GO:GO:0000151
GO:GO:0034976 GO:GO:0034450 GO:GO:0003222
GeneTree:ENSGT00390000009300 IPI:IPI00958178 PRIDE:F1M8D6
Ensembl:ENSRNOT00000021197 ArrayExpress:F1M8D6 Uniprot:F1M8D6
Length = 1174
Score = 673 (242.0 bits), Expect = 6.9e-83, Sum P(4) = 6.9e-83
Identities = 151/414 (36%), Positives = 231/414 (55%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 768 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIE 827
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIA 667
H +S + LV +L+K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + +
Sbjct: 828 NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF 887
Query: 668 KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRL 727
++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R
Sbjct: 888 NSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNQEQWDQLPRDQQQARQSQ 945
Query: 728 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 787
E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ +
Sbjct: 946 LAQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD 1005
Query: 788 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 847
L +++PEKY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF +
Sbjct: 1006 LKVENPEKYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMR 1061
Query: 848 KIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLD--PIQYTLMKDPVILPS 904
K G I I++F L D PDEF P+ TLM DPV LPS
Sbjct: 1062 KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRGKYPLMDTLMTDPVRLPS 1121
Query: 905 SRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I +DR +I RHLL+ TDPFNR LT ML P ELK +I+ +++ + H
Sbjct: 1122 GTI-MDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSSDH 1174
Score = 177 (67.4 bits), Expect = 6.9e-83, Sum P(4) = 6.9e-83
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL + L+ F+ PL AL L
Sbjct: 368 PYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSLDSDY---FKYPLMALGELCET 424
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G + +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 425 KFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 484
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A ++N N
Sbjct: 485 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAIVNAN 538
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +NL V+ +L + K + +DP Y+F+ R+ L
Sbjct: 539 MKKAQMQADDRLVSTDGFMLNLLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 592
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V+EW+ +
Sbjct: 593 DETRINATMEDVNEWLTE 610
Score = 72 (30.4 bits), Expect = 6.9e-83, Sum P(4) = 6.9e-83
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 622 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 679
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 680 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 716
Score = 41 (19.5 bits), Expect = 6.9e-83, Sum P(4) = 6.9e-83
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 299 YLIECFDRVGIEEKKAPKMCSQPAVSQL 326
Score = 39 (18.8 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 497 KAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
+ FSDFK L+ I + L T+ + P + L
Sbjct: 192 EVFSDFKDLIGQILM--EVLMMSTQTRDENPFASL 224
>UNIPROTKB|A5PKG6 [details] [associations]
symbol:UBE4A "Ubiquitin conjugation factor E4 A"
species:9913 "Bos taurus" [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
eggNOG:COG5113 EMBL:BC142480 IPI:IPI00854465 RefSeq:NP_001092469.1
UniGene:Bt.103454 ProteinModelPortal:A5PKG6 SMR:A5PKG6
STRING:A5PKG6 PRIDE:A5PKG6 Ensembl:ENSBTAT00000026289 GeneID:517544
KEGG:bta:517544 CTD:9354 GeneTree:ENSGT00390000009300
HOGENOM:HOG000007049 HOVERGEN:HBG059871 InParanoid:A5PKG6 KO:K10596
OMA:DRDAGEK OrthoDB:EOG4CRKZ8 NextBio:20872466 Uniprot:A5PKG6
Length = 1067
Score = 710 (255.0 bits), Expect = 3.5e-82, Sum P(3) = 3.5e-82
Identities = 156/402 (38%), Positives = 235/402 (58%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY----- 615
++FI +F S + ++NP+LR+K+ EVL MP + + +++F ++ +
Sbjct: 658 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHMDQTPNPLVSSVFHRKRVFCNFPYASH 717
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L+Y+W ++R + + +A K +
Sbjct: 718 LAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGTDTYRESIKDLADYASKNLE 777
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 778 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDNLTPEARREKEAGL 836
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 837 QMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 896
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 897 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 953
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 954 INKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVT 1013
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 1014 VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
Score = 98 (39.6 bits), Expect = 3.5e-82, Sum P(3) = 3.5e-82
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVIENHGYFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MARYHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF ++ +P Y
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 62 (26.9 bits), Expect = 3.5e-82, Sum P(3) = 3.5e-82
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGEKHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 49 (22.3 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A +L E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDL--EDQDW-L 129
Query: 57 SRDLMERVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQA 116
+ +E+ + RL + P +LIN L + +K++ L + ++A
Sbjct: 130 DMNNVEQAVFTRL-----LLQDPGNHLINMTSSTTLNLSADRDAGEKHIFCYLYSCFQRA 184
Query: 117 KKMI 120
K+ I
Sbjct: 185 KEEI 188
>SGD|S000002349 [details] [associations]
symbol:UFD2 "Ubiquitin chain assembly factor (E4)"
species:4932 "Saccharomyces cerevisiae" [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IMP;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006950 "response to
stress" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 SGD:S000002349 GO:GO:0005634
GO:GO:0005737 GO:GO:0006950 EMBL:BK006938 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 EMBL:X83276 GO:GO:0000151
GO:GO:0034450 eggNOG:COG5113 PDB:3M63 PDBsum:3M63 PDB:3M62
PDBsum:3M62 GeneTree:ENSGT00390000009300 KO:K10597 OMA:CFFLTLT
OrthoDB:EOG4MPMZ8 EMBL:U22154 EMBL:Z74238 PIR:S58787
RefSeq:NP_010091.2 PDB:2QIZ PDB:2QJ0 PDBsum:2QIZ PDBsum:2QJ0
ProteinModelPortal:P54860 SMR:P54860 DIP:DIP-5925N IntAct:P54860
MINT:MINT-680185 STRING:P54860 PaxDb:P54860 PeptideAtlas:P54860
EnsemblFungi:YDL190C GeneID:851337 KEGG:sce:YDL190C CYGD:YDL190c
HOGENOM:HOG000248797 EvolutionaryTrace:P54860 NextBio:968408
Genevestigator:P54860 GermOnline:YDL190C Uniprot:P54860
Length = 961
Score = 665 (239.2 bits), Expect = 5.1e-82, Sum P(4) = 5.1e-82
Identities = 152/403 (37%), Positives = 236/403 (58%)
Query: 561 FMNFIIMFMASPKYIRNPYLRSKMVEVLNCW-MPRRSGSSSATATLFEGHQMSLEYLVRN 619
F+ F M + P+ + NP+L+ K+V++L+ MP S +FE ++ + L+
Sbjct: 558 FVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYA 617
Query: 620 LLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLW-QVPSHRNA--WRQIAKEEEKGVYL 676
LL YV +E TGS +QFYDKFN R++I+ +LE L+ ++PS++N W+ + ++
Sbjct: 618 LLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQS---QNNADFFV 674
Query: 677 NFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWE--RRPAQERQERTRLFHSQENI 734
F+ ++ND +LLDE L+ + E+ I+ E+ N A R ++++ +TRL +
Sbjct: 675 RFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQA 734
Query: 735 IRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPE 794
+ LA++ + + S+ I A F+ PE++ R+ASMLNY L LVGP+ L +KDP+
Sbjct: 735 -KSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQ 793
Query: 795 KYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGR 854
Y F PK LLK + +Y++L+ Q+ F +A++ D RS+N LF A D+L + + G
Sbjct: 794 SYSFNPKDLLKALTTVYINLSE---QSEFISAVAKDERSFNRNLFVRAVDILGR--KTGL 848
Query: 855 IIQEFIE--LGXXXXXXXXXXXXXXXXL--GDIPDEFLDPIQYTLMKDPVILPSSRITVD 910
EFIE L L GD+PDEFLDP+ YT+MKDPVILP+S++ +D
Sbjct: 849 ASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNID 908
Query: 911 RPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 953
R I+ HLLSD+TDPFNR L + + PN EL+ KI F K +
Sbjct: 909 RSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK 951
Score = 125 (49.1 bits), Expect = 5.1e-82, Sum P(4) = 5.1e-82
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 333 DTRENVLEYLAEVINRNSSRA--HIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKR 390
++R +++ Y A + N+N R H + LS S+G N++ +++R PFLD + K
Sbjct: 277 NSRTDMISYFAHIANKNHLRRADHPPFKELS--SNGFMSNITLLLVRFSQPFLDISYKKI 334
Query: 391 DKIDPKYVFYSSR-LDLRSLTALHASSEEVSEWINKGNPAKADGSKHF-SD 439
DKID Y S +DL T L++ +E + +K N AD +F SD
Sbjct: 335 DKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDK-NRKTADSKPNFISD 384
Score = 81 (33.6 bits), Expect = 5.1e-82, Sum P(4) = 5.1e-82
Identities = 26/106 (24%), Positives = 54/106 (50%)
Query: 28 EATTDADPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRLSGNFPAAEPPFLYLINCY 87
+ TTD Y L +E + +G + + D ++ +L+ +L+ N + PF YL +C+
Sbjct: 9 QITTDPSDTRGY-SLLKSEEVPQGSTLGV--DFIDTLLLYQLTEN-EKLDKPFEYLNDCF 64
Query: 88 RRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIHLANPDF 133
RR + + K+I K+K L + ++ ++++ Y + L +F
Sbjct: 65 RR-NQQQKRI--TKNKPNAESLHSTFQEIDRLVIGYGVVALQIENF 107
Score = 64 (27.6 bits), Expect = 5.1e-82, Sum P(4) = 5.1e-82
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 475 SKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLK--ATQGQTPSSQLN 532
SK FI +CFF+T L+ GL S + + +I ++ + +K A + +
Sbjct: 377 SKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFIT 436
Query: 533 LEITRIEKEIELSSQEKLCYEAQ 555
+++++EK L + E L + Q
Sbjct: 437 AQLSKMEKA--LKTTESLRFALQ 457
Score = 39 (18.8 bits), Expect = 2.5e-67, Sum P(3) = 2.5e-67
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 297 TRRPADLLSSFTTIKT--VMRG--LYKDLGDVLLAL-LKNTDTRENVLEYLAEVINRNSS 351
T P+D ++ +K+ V +G L D D LL L + + EYL + RN
Sbjct: 11 TTDPSDT-RGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQ 69
Query: 352 RAHI 355
+ I
Sbjct: 70 QKRI 73
>ZFIN|ZDB-GENE-070410-21 [details] [associations]
symbol:ube4a "ubiquitination factor E4A (UFD2
homolog, yeast)" species:7955 "Danio rerio" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 ZFIN:ZDB-GENE-070410-21
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 CTD:9354 GeneTree:ENSGT00390000009300 KO:K10596
EMBL:CR847931 IPI:IPI00631668 RefSeq:XP_001922961.2
UniGene:Dr.160617 UniGene:Dr.69923 Ensembl:ENSDART00000059376
GeneID:557121 KEGG:dre:557121 NextBio:20881830 Bgee:E7F6E1
Uniprot:E7F6E1
Length = 1076
Score = 683 (245.5 bits), Expect = 6.8e-77, Sum P(3) = 6.8e-77
Identities = 158/419 (37%), Positives = 234/419 (55%)
Query: 546 SQEKLCYEAQILRDDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATAT- 604
+ E L A+ L + + FI + M + ++NP+LR+K+ EVL MP S A
Sbjct: 649 ADEVLESSAESL-EHVLTFITVLMGNVDRMKNPHLRAKLAEVLEAVMPHMETLSPGAAQP 707
Query: 605 -LFEGHQMSLEY-----LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPS 658
+F+ ++ Y L L+ ++VDIEFTG QF KFN R + +L+Y+W S
Sbjct: 708 IMFQRQRVFSSYRHAPQLAEALITVFVDIEFTGDPHQFEQKFNYRRPMYAILKYMWGEKS 767
Query: 659 HRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTA 711
+R + + +A + + +L FLN L+ND+I+LLDE++ + ++K+++ E
Sbjct: 768 YRESIKNLADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKILQLERDR-G 826
Query: 712 EWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVAS 771
EW+ R+E+ + R ++NE + LAF + +I F+ P + ER+ S
Sbjct: 827 EWDSLAPDARREKESSLQMFGQLGRFHNIMSNETIGTLAFLTSEIKGLFVHPFLAERIIS 886
Query: 772 MLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDG 831
MLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DG
Sbjct: 887 MLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDG 943
Query: 832 RSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPI 891
RSY+ LF VL KI + G +I F L D PDEFLDPI
Sbjct: 944 RSYSPTLFCQTVRVLKKINKPGDMIISFSLLADKIKSLADRHQQEEETFSDAPDEFLDPI 1003
Query: 892 QYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
TLM DPV+LPSS +TVDR I RHLLSD TDPFNRS LT D + PN EL+ +I +++
Sbjct: 1004 MSTLMLDPVLLPSSNVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNEELRQQIMKWL 1062
Score = 102 (41.0 bits), Expect = 6.8e-77, Sum P(3) = 6.8e-77
Identities = 62/228 (27%), Positives = 93/228 (40%)
Query: 185 FLKEFFEE--ADFD--TLDPILKGLYENLRGSV--LNVSALGNFQQPLRALLYLVSFPVG 238
FL+E AD + T ++ +++ G V L++ L F L LLY
Sbjct: 251 FLEEVIASLLADQEVRTFGEVMVPVFDIFHGRVKDLDLCQLLLFSY-LEILLYFSRQKDI 309
Query: 239 VKSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEAS 296
K L+ H PK NG + T +LG ++S L K+ P V + F S
Sbjct: 310 AKVLMEHIQ--PKDPN-NGIQYQKT-LLGAILNISCL-----LKT-PGVVENHGFFLNPS 359
Query: 297 TRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNT-DTRENVLEYLAEVINRNSSRAHI 355
P +L + I M + L +L LL+ + +TR +L +L + N RA I
Sbjct: 360 RSSPQELKVQESNIHQFMGQFHDKLYQILKNLLQQSGETRHLLLSWLGGCLQANMGRAKI 419
Query: 356 QVEPLS------CASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
+ AS F+NL A +L+LC PF K +P Y
Sbjct: 420 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFSRPYSPKLLTFNPTY 467
Score = 76 (31.8 bits), Expect = 6.8e-77, Sum P(3) = 6.8e-77
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 17 ILRKIFLVTLNEATTDA------DPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRLS 70
++++IFL+TL+ + PR YLE AA+L +G+D L+ D +E+ L +RL
Sbjct: 90 MIQRIFLITLDNSDPSLRSGNGIPPRCVYLEEMAADL--DGQDW-LNMDTIEQALFNRLL 146
Query: 71 GNFPAAEPPFLYLINC 86
P +Y+ +C
Sbjct: 147 LQEPGNH--LIYMTSC 160
Score = 55 (24.4 bits), Expect = 1.1e-74, Sum P(3) = 1.1e-74
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 66 VDRLSGNFPAAEPPFL-YLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYC 124
V LS + A E + YL CY+RA +E+ K+ +L + K + VS
Sbjct: 162 VVNLSADRDAGEKRAIPYLYACYQRAKEEITKVPE--------KLLSFAVHCKNLTVSNA 213
Query: 125 RIHLANPDFF 134
R L P+ +
Sbjct: 214 RTVLLTPEIY 223
Score = 51 (23.0 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 313 VMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVI 346
+ + +Y+ L D+LL ++ E V+E+L EVI
Sbjct: 224 ISQNVYEQLLDLLLEAVRGAQFEE-VVEFLEEVI 256
>CGD|CAL0003403 [details] [associations]
symbol:orf19.5965 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
CGD:CAL0003403 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000151 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0034450
eggNOG:COG5113 KO:K10597 RefSeq:XP_723029.1 RefSeq:XP_723176.1
ProteinModelPortal:Q5AND8 STRING:Q5AND8 GeneID:3635164
GeneID:3635292 KEGG:cal:CaO19.13386 KEGG:cal:CaO19.5965
Uniprot:Q5AND8
Length = 1075
Score = 647 (232.8 bits), Expect = 1.4e-75, Sum P(3) = 1.4e-75
Identities = 144/397 (36%), Positives = 229/397 (57%)
Query: 561 FMNFIIMFMASPKYIRNPYLRSKMVEVLNCW-MPRRSGSSSATATLFEGHQMSLEYLVRN 619
F+ F + + P+ I NP++++ +VE+L +P ++G+ + +F G+Q+ ++ L+ +
Sbjct: 664 FVEFSTILLRCPELIGNPHMKANLVELLFMGSLPMQNGAPGFISNIFNGNQLVMDNLLYS 723
Query: 620 LLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFL 679
LL YV +E TG+ +QFYDKFN R+ I+ +LE LWQ P +R +K ++ F+
Sbjct: 724 LLDFYVMVEKTGASSQFYDKFNSRYYISVILEELWQNPRYRFQLTDYSKNNVD-FFIRFI 782
Query: 680 NFLINDSIYLLDESLNKILELKVIEAEMSNTAEW-ERRPAQERQER-TRLFHSQENIIRI 737
++ND+ YLLDE+ N + + + E+ E E + E ++
Sbjct: 783 ARMLNDTTYLLDETFNLLNSIHDYQQEIKKRESGGEANETMGTDEELAQNLEEDERRVKS 842
Query: 738 DMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYE 797
M L+N+ + + ++++ F+LPE+++R+A ML+Y L LVGP+ +L + +PEKY+
Sbjct: 843 YMGLSNKTMELFKLFTKEVPRGFVLPEIVDRLAGMLDYNLSILVGPRCSNLKVAEPEKYQ 902
Query: 798 FRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW-KIGEDGRII 856
F PK++L + IYV L+ Q F A++ DGRS+N F A +L K II
Sbjct: 903 FEPKKILSDLCEIYVSLS---AQPEFVIAVARDGRSFNIVYFQKAEKILTTKTFIKNEII 959
Query: 857 QEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQR 916
IE LG+IPDEFLDP+ +TLM+DPVILPSSR+++DR I+
Sbjct: 960 NGLIEFANKAEKARLDEENEELELGEIPDEFLDPLMFTLMEDPVILPSSRVSIDRSTIKA 1019
Query: 917 HLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 953
HLLSD+TDPFNR L + +I + ELK KI++F K Q
Sbjct: 1020 HLLSDSTDPFNRVPLKLEDVIDDVELKQKIQDF-KQQ 1055
Score = 168 (64.2 bits), Expect = 1.4e-75, Sum P(3) = 1.4e-75
Identities = 50/168 (29%), Positives = 89/168 (52%)
Query: 261 EMTSILGPFFHVSALPDH-AIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMRGLYK 319
E ++LGP +S L D+ A F GQ E ++ P + + + +++T + +
Sbjct: 307 EHKTLLGPLLRISPLLDNMASFY----FGQ----ETNSMSPVQINNLYGSMQTEYKVIID 358
Query: 320 DLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLSCASSGMFVNLSAVMLRL 378
L ++ L++ +T TRE++L++L +IN + R + AS G+ N+S V +RL
Sbjct: 359 HLFVIIDKLIRGSTKTREDLLQWLGNLINLSHLRRGSHADFKKLASDGIMYNISVVFIRL 418
Query: 379 CDPFLD-ANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEVSEWINK 425
PFLD K DKID Y F S +D++ + ++++ EE +E+ K
Sbjct: 419 SLPFLDYPTFGKIDKIDVDYFFKSDLIDIKEESRVNSTIEESNEYYAK 466
Score = 52 (23.4 bits), Expect = 1.4e-75, Sum P(3) = 1.4e-75
Identities = 15/69 (21%), Positives = 31/69 (44%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQ---GQTPSSQ--LNL 533
FI +CF +T L+ G+ F + + + + + E L +++ G P Q +
Sbjct: 484 FISDCFNLTLAYLHYGVGGIFVKYDRVKRQLDQMEQRLEAIESEHPIPGMNPMMQQLMRR 543
Query: 534 EITRIEKEI 542
E+ ++ I
Sbjct: 544 ELPNLKNAI 552
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 788 LTLKDPEKYEFRPKQLLKQIV 808
L K PE +++ P+ +L+ I+
Sbjct: 620 LKTKTPEPWKYYPEFILEGII 640
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 6/34 (17%), Positives = 17/34 (50%)
Query: 542 IELSSQEKLCYEAQILRDDFMNFIIMFMASPKYI 575
++++ EK +E + + D + A P+++
Sbjct: 893 LKVAEPEKYQFEPKKILSDLCEIYVSLSAQPEFV 926
>FB|FBgn0032467 [details] [associations]
symbol:CG9934 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 KO:K10597 FlyBase:FBgn0032467
EMBL:AY094803 RefSeq:NP_001162967.1 RefSeq:NP_609597.1
UniGene:Dm.6565 SMR:Q9VK44 IntAct:Q9VK44 MINT:MINT-1676904
EnsemblMetazoa:FBtr0080428 EnsemblMetazoa:FBtr0301247 GeneID:34699
KEGG:dme:Dmel_CG9934 UCSC:CG9934-RA InParanoid:Q9VK44 OMA:RYANRNN
GenomeRNAi:34699 NextBio:789760 Uniprot:Q9VK44
Length = 1217
Score = 637 (229.3 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 139/398 (34%), Positives = 228/398 (57%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLL 621
+ +++ + + I+NPY+ +K+VEV+ + + + +S A ++ H+++ LV +L+
Sbjct: 828 ITWLLTCVCASHLIKNPYVTAKLVEVMFVFSLKPA--NSVNAAMWN-HELAQNALVSSLM 884
Query: 622 KLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNF 681
+ YVD+E TG T+FYDKF IR++I+ L + +W+ P HR A I + ++ F+N
Sbjct: 885 RFYVDVETTGQSTEFYDKFTIRYHISHLFKSMWENPIHRQA--VICESRVGNQFVKFVNM 942
Query: 682 LINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKL 741
L+ND+ +LLDE L + + + +S+ A + A+++Q R + E R + L
Sbjct: 943 LMNDTTFLLDECLENLKRIHQTQQLLSDKANLSKMSAEQQQSRLTQLATDERQCRSYLTL 1002
Query: 742 ANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPK 801
A E V + + + I PF+ E+++R++SMLN+ L QL GP+ L +K+P KY + P+
Sbjct: 1003 ARETVDLFHYLTSDIKEPFMRDELVDRLSSMLNFNLKQLAGPKCNDLKVKNPAKYGWEPR 1062
Query: 802 QLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFI 860
LL QI IY+HL D F A+++D RS++ Q+ + AA + ++ + ++ F
Sbjct: 1063 SLLAQIFDIYLHL---DCDR-FAEALAADERSFDVQICNEAASRIKRLALRSAVEVERFK 1118
Query: 861 ELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLS 920
L D PDEF DP+ TLM DPV+LPS + +DR +I RHLL+
Sbjct: 1119 ALTQRAHEIYVTNLQTEDECADAPDEFKDPLMDTLMSDPVVLPSGTV-MDRAIITRHLLN 1177
Query: 921 DATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
TDPFNR LT DML+ N ELK +I+ + K Q KR+
Sbjct: 1178 SCTDPFNRQPLTEDMLVANIELKQRIDAWRKEQRGKRN 1215
Score = 151 (58.2 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 61/237 (25%), Positives = 109/237 (45%)
Query: 195 FDTL-DPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVG----VKSLVNHQ--W 247
FDT+ +L+GL+ ++ ++ S + + QQ + L LV VG + LV+ Q +
Sbjct: 435 FDTIFSQVLRGLFAGMQRNICT-SKI-SVQQ-IEWLSKLVVIKVGSVRPIADLVSRQPNF 491
Query: 248 WIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSF 307
P ++GR I S LGPF VS + I K F+E +T+ + SS
Sbjct: 492 LPPICTKISGREIVKCSFLGPFLSVSLFAEENI-K---------FAEFTTKNKLEDASS- 540
Query: 308 TTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEPLSCASSGM 367
+ ++ + + ++ V +L N +R LEY+A ++ N R + A G
Sbjct: 541 SRLRWELHSMRTNMHVVFHSLCVNASSRPKTLEYIASILRHNDRRVQFASDEKLLARDGF 600
Query: 368 FVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRL-DLRSLTALHASSEEVSEWI 423
+NL +V+ +L K D+I+P + +Y + L ++ T + S EE ++
Sbjct: 601 MINLMSVLQQLSVKI------KLDRIEPNFHYYKNSLVNIEQDTKIRYSEEEYRNFL 651
Score = 72 (30.4 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL---NLEI 535
F +C+F+T + +LG L A ++ V+ I + + L T+ +S+ N +
Sbjct: 664 FQTQCWFLTLQAHHLGYLPAIQRYRQKVRAIKELQKLIDELDRTKSHWMNSRYANRNNQF 723
Query: 536 T-RIEKEIELSSQEKLCYEAQIL 557
R EK++ ++ K C E +L
Sbjct: 724 KERWEKQLRKLNRSKTCCEITLL 746
Score = 43 (20.2 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 81 LYLINCYRRAHDELKKIGNMKDKNLRSELEAVVK 114
LYLI CY+ E + + L+ E V++
Sbjct: 351 LYLIRCYQNYQTECSRKTPLTQPALQLAFEQVMR 384
Score = 41 (19.5 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 440 GENQLLQSQEATSSSGGASEPSLPAGRPA 468
GE++L++ EAT G E SLP PA
Sbjct: 110 GESRLVR--EATP---GEKEVSLPTSAPA 133
>UNIPROTKB|B7Z7P0 [details] [associations]
symbol:UBE4A "cDNA FLJ51394, highly similar to Ubiquitin
conjugation factor E4 A" species:9606 "Homo sapiens" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 GO:GO:0005737
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209
GO:GO:0000151 GO:GO:0034450 EMBL:AP001582 HOGENOM:HOG000007049
OrthoDB:EOG4CRKZ8 UniGene:Hs.602967 UniGene:Hs.75275
HGNC:HGNC:12499 ChiTaRS:UBE4A EMBL:AP001267 EMBL:AK302328
IPI:IPI01012808 SMR:B7Z7P0 STRING:B7Z7P0 Ensembl:ENST00000545354
Uniprot:B7Z7P0
Length = 538
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 157/402 (39%), Positives = 236/402 (58%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY--- 615
++FI +F S + ++NP+LR+K+ EVL MP + + +++F ++ + +Y
Sbjct: 130 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQ 189
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV- 674
L L+K++VDIEFTG QF KFN R + +L Y+W ++R + + +A K +
Sbjct: 190 LAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLE 249
Query: 675 ------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLF 728
+L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 250 AMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGL 308
Query: 729 HSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSL 788
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L
Sbjct: 309 QMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGAL 368
Query: 789 TLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 848
+KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL K
Sbjct: 369 KVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKK 425
Query: 849 IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRIT 908
I + G +I F L D DEFLDPI TLM DPV+LPSSR+T
Sbjct: 426 INKPGNMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVT 485
Query: 909 VDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
VDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++
Sbjct: 486 VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 527
>UNIPROTKB|F1M8W6 [details] [associations]
symbol:Ube4a "Ubiquitin conjugation factor E4 A"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
RGD:1303173 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000151 GO:GO:0034450 IPI:IPI00476304
Ensembl:ENSRNOT00000021060 ArrayExpress:F1M8W6 Uniprot:F1M8W6
Length = 1030
Score = 502 (181.8 bits), Expect = 2.8e-66, Sum P(5) = 2.8e-66
Identities = 109/259 (42%), Positives = 153/259 (59%)
Query: 692 ESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAF 751
ES+ + ++K+ + E + EWE + R+E+ + R ++NE + L+F
Sbjct: 765 ESIKYLSKIKIQQIE-KDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLSF 823
Query: 752 TSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIY 811
+ +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY
Sbjct: 824 LTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIY 883
Query: 812 VHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXX 871
++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 884 LNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLAD 940
Query: 872 XXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHL 931
D DEFLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS L
Sbjct: 941 LQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPL 1000
Query: 932 TADMLIPNTELKAKIEEFI 950
T D + PNTELK KI+ ++
Sbjct: 1001 TMDQIRPNTELKEKIQRWL 1019
Score = 170 (64.9 bits), Expect = 2.8e-66, Sum P(5) = 2.8e-66
Identities = 38/113 (33%), Positives = 65/113 (57%)
Query: 562 MNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY----- 615
++FI +F S + ++NP+LR+K+ EVL MP + S +++F ++ +
Sbjct: 660 LHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKRVFCNFPYAPQ 719
Query: 616 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAK 668
L L+K++VDIEFTG QF KFN R + +L Y+W S+R + + ++K
Sbjct: 720 LSEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKYLSK 772
Score = 102 (41.0 bits), Expect = 2.8e-66, Sum P(5) = 2.8e-66
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 323 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGFFLNPSRSSPQEIKVQEANIHQF 375
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 376 MAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 435
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDL-RSLTALH 413
F+NL A +L+LC PF ++ +P Y D R + ++H
Sbjct: 436 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCVLKDLNDEERKIKSVH 483
Score = 61 (26.5 bits), Expect = 2.8e-66, Sum P(5) = 2.8e-66
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 164 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 215
Query: 128 LANPDFF 134
L P+ +
Sbjct: 216 LLTPEIY 222
Score = 46 (21.3 bits), Expect = 2.8e-66, Sum P(5) = 2.8e-66
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 17 ILRKIFLVTLNEATTDAD-----P-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + P R YLE A EL E +D L +E+ + RL
Sbjct: 89 MIQRIFLITLDNSDPNLKSGNGIPSRCVYLEEMAVEL--EDQDW-LDMSNVEQAIFARL 144
>UNIPROTKB|F1NIK2 [details] [associations]
symbol:CBL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:AADN02041816 EMBL:AADN02041817
EMBL:AADN02041818 EMBL:AADN02041819 EMBL:AADN02041820
EMBL:AADN02041821 EMBL:AADN02041822 EMBL:AADN02041823
EMBL:AADN02041824 EMBL:AADN02041825 EMBL:AADN02041826
EMBL:AADN02041827 EMBL:AADN02041828 EMBL:AADN02041829
EMBL:AADN02041830 EMBL:AADN02041831 EMBL:AADN02041832
EMBL:AADN02041833 IPI:IPI00679951 Ensembl:ENSGALT00000011196
ArrayExpress:F1NIK2 Uniprot:F1NIK2
Length = 1072
Score = 609 (219.4 bits), Expect = 7.3e-66, Sum P(4) = 7.3e-66
Identities = 145/417 (34%), Positives = 228/417 (54%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY 615
+ ++F+ +FM + ++NP+LR+K+ EVL MP + + +++F ++ S +Y
Sbjct: 659 EHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFHRKRVFCSYQY 718
Query: 616 ---LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEK 672
L L+K++VDIEFTG QF KFN R + +L Y+W S+R + + +A +
Sbjct: 719 AAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRQSIKALADYASE 778
Query: 673 GV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERT 725
+ +L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 779 NLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDNLSQEARREKE 837
Query: 726 RLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQR 785
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+
Sbjct: 838 SSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKM 897
Query: 786 KSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADV 845
+L +KD +++F+P+QL+ I IY++L T+ + + ++N S
Sbjct: 898 GALKVKDFSEFDFKPQQLVSDICTIYLNLGYV-TRECWRWDKNGPLGAFNLLASSGKCLC 956
Query: 846 LWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSS 905
W ++Q D DEFLDPI TLM DPVILPSS
Sbjct: 957 NWNGAGKSWVLQAVCAC----QSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSS 1012
Query: 906 RITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRHGEGL 962
R+TVDR I RHLLSD TDPFNRS LT D + PN ELK KI++++ + K+ E L
Sbjct: 1013 RVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNRELKEKIQQWLAER--KKQKEEL 1067
Score = 109 (43.4 bits), Expect = 7.3e-66, Sum P(4) = 7.3e-66
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ + I
Sbjct: 322 NGQMYQKT-LLGAILNISCL-----LKT-PGVVENHGYFLNPSRSSPQEIKVQESNIHQF 374
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ NS R I + AS
Sbjct: 375 MAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANSGRTKIWANQMPEIFFQMYASDA 434
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF K +P Y
Sbjct: 435 FFLNLGAALLKLCQPFCKPKSPKLLTFNPTY 465
Score = 53 (23.7 bits), Expect = 7.3e-66, Sum P(4) = 7.3e-66
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 69 LSGNFPAAEPPFL-YLINCYRRAHDELKKI 97
LS + A E L YL C++RA +E+ K+
Sbjct: 163 LSADRDAGEKQILRYLYACFQRAREEITKV 192
Score = 49 (22.3 bits), Expect = 7.3e-66, Sum P(4) = 7.3e-66
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 17 ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + + P R YLE AA+L + +D L + +E+ L RL
Sbjct: 88 MIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADL--DDQDW-LDMENIEQALFTRL 143
Score = 38 (18.4 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 199 DPILKGLYEN-LRGSVLNVSAL 219
DP +Y+ L G++LN+S L
Sbjct: 319 DPNNGQMYQKTLLGAILNISCL 340
>UNIPROTKB|E1C6M5 [details] [associations]
symbol:CBL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:AADN02041816
EMBL:AADN02041817 EMBL:AADN02041818 EMBL:AADN02041819
EMBL:AADN02041820 EMBL:AADN02041821 EMBL:AADN02041822
EMBL:AADN02041823 EMBL:AADN02041824 EMBL:AADN02041825
EMBL:AADN02041826 EMBL:AADN02041827 EMBL:AADN02041828
EMBL:AADN02041829 EMBL:AADN02041830 EMBL:AADN02041831
EMBL:AADN02041832 EMBL:AADN02041833 IPI:IPI00820763
Ensembl:ENSGALT00000040809 ArrayExpress:E1C6M5 Uniprot:E1C6M5
Length = 1072
Score = 420 (152.9 bits), Expect = 3.9e-64, Sum P(5) = 3.9e-64
Identities = 91/277 (32%), Positives = 161/277 (58%)
Query: 559 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY 615
+ ++F+ +FM + ++NP+LR+K+ EVL MP + + +++F ++ S +Y
Sbjct: 660 EHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFHRKRVFCSYQY 719
Query: 616 ---LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEK 672
L L+K++VDIEFTG QF KFN R + +L Y+W S+R + + +A +
Sbjct: 720 AAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRQSIKALADYASE 779
Query: 673 GV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERT 725
+ +L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+
Sbjct: 780 NLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDNLSQEARREKE 838
Query: 726 RLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQR 785
+ R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+
Sbjct: 839 SSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKM 898
Query: 786 KSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNL 822
+L +KD +++F+P+QL+ I IY++L DT ++
Sbjct: 899 GALKVKDFSEFDFKPQQLVSDICTIYLNLGCWDTDDV 935
Score = 244 (91.0 bits), Expect = 3.9e-64, Sum P(5) = 3.9e-64
Identities = 51/81 (62%), Positives = 59/81 (72%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTE 941
D DEFLDPI TLM DPVILPSSR+TVDR I RHLLSD TDPFNRS LT D + PN E
Sbjct: 989 DACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNRE 1048
Query: 942 LKAKIEEFIKSQGLKRHGEGL 962
LK KI++++ + K+ E L
Sbjct: 1049 LKEKIQQWLAER--KKQKEEL 1067
Score = 109 (43.4 bits), Expect = 3.9e-64, Sum P(5) = 3.9e-64
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ + I
Sbjct: 322 NGQMYQKT-LLGAILNISCL-----LKT-PGVVENHGYFLNPSRSSPQEIKVQESNIHQF 374
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ NS R I + AS
Sbjct: 375 MAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANSGRTKIWANQMPEIFFQMYASDA 434
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF K +P Y
Sbjct: 435 FFLNLGAALLKLCQPFCKPKSPKLLTFNPTY 465
Score = 53 (23.7 bits), Expect = 3.9e-64, Sum P(5) = 3.9e-64
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 69 LSGNFPAAEPPFL-YLINCYRRAHDELKKI 97
LS + A E L YL C++RA +E+ K+
Sbjct: 163 LSADRDAGEKQILRYLYACFQRAREEITKV 192
Score = 49 (22.3 bits), Expect = 3.9e-64, Sum P(5) = 3.9e-64
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 17 ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + + P R YLE AA+L + +D L + +E+ L RL
Sbjct: 88 MIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADL--DDQDW-LDMENIEQALFTRL 143
Score = 38 (18.4 bits), Expect = 8.4e-57, Sum P(5) = 8.4e-57
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 199 DPILKGLYEN-LRGSVLNVSAL 219
DP +Y+ L G++LN+S L
Sbjct: 319 DPNNGQMYQKTLLGAILNISCL 340
>WB|WBGene00006734 [details] [associations]
symbol:ufd-2 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0040011
GO:GO:0007283 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 EMBL:Z47812 GO:GO:0000151
GO:GO:0051865 GO:GO:0034450 GO:GO:0042006
GeneTree:ENSGT00390000009300 KO:K10597 UniGene:Cel.7502
GeneID:174295 KEGG:cel:CELE_T05H10.5 UCSC:T05H10.5a CTD:174295
HOGENOM:HOG000020029 NextBio:883404 RefSeq:NP_495691.1
ProteinModelPortal:Q95QB5 SMR:Q95QB5 IntAct:Q95QB5
MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 483 (175.1 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 120/392 (30%), Positives = 208/392 (53%)
Query: 560 DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRN 619
D+++ + + YI++P+L SK+V VL+ P + L +M+ E L+
Sbjct: 601 DWISRLTVLFTQYHYIKSPFLVSKLVRVLSSIQPPLWFN---VVRL----RMAQENLLMC 653
Query: 620 LLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFL 679
++K Y D E G FY+KFN+R NI +LE + + ++ + +A+E ++ F+
Sbjct: 654 MIKFYSDFEDNGD---FYEKFNVRGNIQYMLEKMEEDMFYKGKFMDMARECG-AEFIRFV 709
Query: 680 NFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDM 739
N +IND+ + +DESL+ + + +E +M+N EW+ + R + ++ + ++ +
Sbjct: 710 NMVINDATWCIDESLSGLKSIHDVEKKMANKVEWDNTDQEIRNQDLGVYEEAKRKVKGWL 769
Query: 740 KLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFR 799
A ++ +L + PF P + ER+A+MLN+ L QL+G + L +KDP Y +
Sbjct: 770 GTAKSNLKLLLSITVNSPEPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWE 829
Query: 800 PKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDG-RIIQE 858
P++ + ++ IY+ L F I+ D R+Y+ + F A + + K G ++
Sbjct: 830 PREFVSLLISIYLKL----NMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLES 885
Query: 859 FIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHL 918
F L D+P+EF DPI +M DPV LPS + +DR VI+RHL
Sbjct: 886 FEHLAEDVKKEYEAKAELEEEYDDVPEEFKDPIMDAIMVDPVKLPSGHV-MDRAVIERHL 944
Query: 919 LSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
LS +PFNR+ L+ + L P++ELKAKI+E+I
Sbjct: 945 LSTPNNPFNRAPLSHNELSPDSELKAKIQEWI 976
Score = 89 (36.4 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 42/202 (20%), Positives = 81/202 (40%)
Query: 191 EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGVKS--------- 241
+E D D + ++ LR ++ N + +R +L +++ + ++
Sbjct: 196 DECDEDAITETFNPIFGILRSGIICQRFEDNKDEIVRQILRVMNLLLSIRLPSNGPRPLS 255
Query: 242 --LVNHQWWIPK-SVYLNGRVIEMTSILGPFFHV----SAL-PDHAIFKSQPDVGQQCFS 293
LVN + ++P S + GR + S LGPFF SA P+H +F + ++
Sbjct: 256 NLLVNREDFLPTPSEKIQGREFGLMSFLGPFFSYGLESSARRPNHRVFVDCEEDARKYDG 315
Query: 294 EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRA 353
+T + I+T++ L +L L + +R L ++A +I+ N R
Sbjct: 316 SVNTEQKL-YFQRMDPIRTMLHQL-------MLPLASDQGSRNKTLRWIATIISTNDIRT 367
Query: 354 HIQVEPLSCASSGMFVNLSAVM 375
+P N +VM
Sbjct: 368 RSHYDPSDVLCDHYMTNFLSVM 389
Score = 54 (24.1 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 476 KYPFICECFFMTARVLNL---GLLKAFSDF----KHLVQDISRAEDTLATLKATQGQTPS 528
+Y F CFF+T L L+ S++ K L I+ ++ L T+ +
Sbjct: 441 EYHFSTVCFFLTIAAQRLVIPPLMNQISEYSRHLKELKHKINALKEKLNTVSGFERAEVE 500
Query: 529 SQLNLEITRIEKEIELSSQEKLCYEAQ 555
+LN E + +L S+ LC + Q
Sbjct: 501 KKLNYET----EHWKLMSRHLLCVKTQ 523
>UNIPROTKB|Q95QB5 [details] [associations]
symbol:ufd-2 "Protein UFD-2, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040011 GO:GO:0007283 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 EMBL:Z47812 GO:GO:0000151 GO:GO:0051865 GO:GO:0034450
GO:GO:0042006 GeneTree:ENSGT00390000009300 KO:K10597
UniGene:Cel.7502 GeneID:174295 KEGG:cel:CELE_T05H10.5
UCSC:T05H10.5a CTD:174295 HOGENOM:HOG000020029 NextBio:883404
RefSeq:NP_495691.1 ProteinModelPortal:Q95QB5 SMR:Q95QB5
IntAct:Q95QB5 MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 483 (175.1 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 120/392 (30%), Positives = 208/392 (53%)
Query: 560 DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRN 619
D+++ + + YI++P+L SK+V VL+ P + L +M+ E L+
Sbjct: 601 DWISRLTVLFTQYHYIKSPFLVSKLVRVLSSIQPPLWFN---VVRL----RMAQENLLMC 653
Query: 620 LLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFL 679
++K Y D E G FY+KFN+R NI +LE + + ++ + +A+E ++ F+
Sbjct: 654 MIKFYSDFEDNGD---FYEKFNVRGNIQYMLEKMEEDMFYKGKFMDMARECG-AEFIRFV 709
Query: 680 NFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDM 739
N +IND+ + +DESL+ + + +E +M+N EW+ + R + ++ + ++ +
Sbjct: 710 NMVINDATWCIDESLSGLKSIHDVEKKMANKVEWDNTDQEIRNQDLGVYEEAKRKVKGWL 769
Query: 740 KLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFR 799
A ++ +L + PF P + ER+A+MLN+ L QL+G + L +KDP Y +
Sbjct: 770 GTAKSNLKLLLSITVNSPEPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWE 829
Query: 800 PKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDG-RIIQE 858
P++ + ++ IY+ L F I+ D R+Y+ + F A + + K G ++
Sbjct: 830 PREFVSLLISIYLKL----NMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLES 885
Query: 859 FIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHL 918
F L D+P+EF DPI +M DPV LPS + +DR VI+RHL
Sbjct: 886 FEHLAEDVKKEYEAKAELEEEYDDVPEEFKDPIMDAIMVDPVKLPSGHV-MDRAVIERHL 944
Query: 919 LSDATDPFNRSHLTADMLIPNTELKAKIEEFI 950
LS +PFNR+ L+ + L P++ELKAKI+E+I
Sbjct: 945 LSTPNNPFNRAPLSHNELSPDSELKAKIQEWI 976
Score = 89 (36.4 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 42/202 (20%), Positives = 81/202 (40%)
Query: 191 EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGVKS--------- 241
+E D D + ++ LR ++ N + +R +L +++ + ++
Sbjct: 196 DECDEDAITETFNPIFGILRSGIICQRFEDNKDEIVRQILRVMNLLLSIRLPSNGPRPLS 255
Query: 242 --LVNHQWWIPK-SVYLNGRVIEMTSILGPFFHV----SAL-PDHAIFKSQPDVGQQCFS 293
LVN + ++P S + GR + S LGPFF SA P+H +F + ++
Sbjct: 256 NLLVNREDFLPTPSEKIQGREFGLMSFLGPFFSYGLESSARRPNHRVFVDCEEDARKYDG 315
Query: 294 EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRA 353
+T + I+T++ L +L L + +R L ++A +I+ N R
Sbjct: 316 SVNTEQKL-YFQRMDPIRTMLHQL-------MLPLASDQGSRNKTLRWIATIISTNDIRT 367
Query: 354 HIQVEPLSCASSGMFVNLSAVM 375
+P N +VM
Sbjct: 368 RSHYDPSDVLCDHYMTNFLSVM 389
Score = 54 (24.1 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 476 KYPFICECFFMTARVLNL---GLLKAFSDF----KHLVQDISRAEDTLATLKATQGQTPS 528
+Y F CFF+T L L+ S++ K L I+ ++ L T+ +
Sbjct: 441 EYHFSTVCFFLTIAAQRLVIPPLMNQISEYSRHLKELKHKINALKEKLNTVSGFERAEVE 500
Query: 529 SQLNLEITRIEKEIELSSQEKLCYEAQ 555
+LN E + +L S+ LC + Q
Sbjct: 501 KKLNYET----EHWKLMSRHLLCVKTQ 523
>UNIPROTKB|I3LQG8 [details] [associations]
symbol:LOC100737278 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:FP104527 EMBL:FP565389
Ensembl:ENSSSCT00000024710 OMA:INECTHY Uniprot:I3LQG8
Length = 289
Score = 493 (178.6 bits), Expect = 3.5e-46, P = 3.5e-46
Identities = 111/285 (38%), Positives = 159/285 (55%)
Query: 675 YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENI 734
++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E +
Sbjct: 10 FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERV 69
Query: 735 IRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPE 794
R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PE
Sbjct: 70 SRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPE 129
Query: 795 KYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGR 854
KY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF + K G
Sbjct: 130 KYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKST 185
Query: 855 I-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPV 913
I I++F L D PDEF DP+ TLM DPV LPS I +DR +
Sbjct: 186 IAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI-MDRSI 244
Query: 914 IQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 958
I RHLL+ TDPFNR LT ML P ELK +I +++ + H
Sbjct: 245 ILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIHAWMREKQNSDH 289
>UNIPROTKB|F1RIG2 [details] [associations]
symbol:F1RIG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034976 "response to endoplasmic reticulum stress"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR019474 Pfam:PF10408 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 EMBL:FP104527
Ensembl:ENSSSCT00000003769 OMA:GSSFGAC Uniprot:F1RIG2
Length = 969
Score = 169 (64.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 483 PYGFIQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 539
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 540 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 599
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 600 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 653
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 654 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 707
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V++W+ +
Sbjct: 708 DETRVNATMEDVNDWLTE 725
Score = 125 (49.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 552 YEAQILRD----DFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFE 607
Y Q+L + D + F+++ + + YIRNPYL +K+VEV+ P + + E
Sbjct: 883 YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE 942
Query: 608 GHQMSLEYLVRNLLKLYVDIEFTGSHT 634
H +S + LV +L+K Y D +G +
Sbjct: 943 NHPLSTKLLVPSLMKFYTDTRHSGKRS 969
Score = 72 (30.4 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 737 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 794
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDDFMNFIIMF 568
+ R + +++ + K C +A +L + F+ + F
Sbjct: 795 REMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNF 831
Score = 41 (19.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 414 YLIECFDRVGIEEKKAPKMCSQPAVSQL 441
>UNIPROTKB|K7ERA7 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR019474 Pfam:PF10408
EMBL:AL590639 EMBL:AL096841 HGNC:HGNC:12500 Ensembl:ENST00000488228
Uniprot:K7ERA7
Length = 98
Score = 185 (70.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 32/92 (34%), Positives = 59/92 (64%)
Query: 626 DIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLIND 685
D+E TG+ ++FYDKF IR++I+ + + LWQ +H + + ++ ++ ++N LIND
Sbjct: 2 DVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLIND 59
Query: 686 SIYLLDESLNKILELKVIEAEMSNTAEWERRP 717
+ +LLDESL + + ++ EM N +W++ P
Sbjct: 60 TTFLLDESLESLKRIHEVQEEMKNKEQWDQLP 91
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 137 (53.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 80 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 138
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 139 AMKEVIDAFISENG 152
>UNIPROTKB|K7EP75 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR019474 Pfam:PF10408
EMBL:AL590639 EMBL:AL096841 HGNC:HGNC:12500 Ensembl:ENST00000470736
Uniprot:K7EP75
Length = 276
Score = 132 (51.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 31/109 (28%), Positives = 61/109 (55%)
Query: 319 KDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEPLSCASSGMFVNLSAVMLRL 378
++L +L ++L N +TRE L Y+A V+N N +A +Q + ++ G +N V+ +L
Sbjct: 93 QELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQL 152
Query: 379 CDPFLDANLTKRDKIDPKYVFYSS-RLDL-RSLTALHASSEEVSEWINK 425
+ K + +DP Y+F+ R+ L T ++A+ E+V++W+ +
Sbjct: 153 ------STKIKLETVDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTE 195
Score = 58 (25.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 207 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPL 260
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/74 (45%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT D LIPN
Sbjct: 174 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNL 232
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 233 AMKEVIDAFISENG 246
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 154 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 212
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 213 AMKEVIDAFISENG 226
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/74 (45%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT D LIPN
Sbjct: 237 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNL 295
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 296 AMKEVIDAFISENG 309
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 284
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 285 AMKEVIDAFISENG 298
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 284
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 285 AMKEVIDAFISENG 298
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 284
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 285 AMKEVIDAFISENG 298
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 227 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 285
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 286 AMKEVIDAFISENG 299
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 227 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 285
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 286 AMKEVIDAFISENG 299
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 137 (53.3 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
DIPD I + LM++P I PS IT DR I+ HL DP RS LT + LIPN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNL 284
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI G
Sbjct: 285 AMKEVIDAFISENG 298
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 138 (53.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 33/74 (44%), Positives = 41/74 (55%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
+IPD I + LM++P I PS IT DR I+ HL DP RS LT D LIPN
Sbjct: 210 EIPDYLCGKISFELMREPCITPSG-ITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNL 268
Query: 941 ELKAKIEEFIKSQG 954
+K I+ FI+ G
Sbjct: 269 AMKEVIDAFIQENG 282
Score = 40 (19.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 20/89 (22%), Positives = 35/89 (39%)
Query: 43 TAAELLSEGKDMRLSRDLMERVLV-DRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMK 101
+A EL +G + LSR E V + P+ + CY + K + + K
Sbjct: 13 SAQELKEQGNRLFLSRKYQEAVTCYSKAINRNPSVAVYYTNRALCYVKLQQYDKALADCK 72
Query: 102 DKNLRSELEAVVKQAKKMIVSYCRIHLAN 130
EL++ +A + C++ L N
Sbjct: 73 HA---LELDSQSVKAH-FFLGQCQLELEN 97
>ASPGD|ASPL0000001660 [details] [associations]
symbol:AN5906 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00504
EMBL:BN001301 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000163725
OMA:QENELHS EnsemblFungi:CADANIAT00007127 Uniprot:C8UZU5
Length = 293
Score = 135 (52.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 883 IPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTEL 942
+PD +DPI + +M DPVI+PS + DR I +++ DP R+ +T + L PN L
Sbjct: 218 VPDYLVDPITFEIMHDPVIVPSGT-SFDRIGILKYVEQSGVDPITRTPMTVNDLRPNYAL 276
Query: 943 KAKIEEFIKSQG 954
KA E+F+ G
Sbjct: 277 KAACEDFLTKNG 288
>FB|FBgn0027052 [details] [associations]
symbol:CHIP "CHIP" species:7227 "Drosophila melanogaster"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0030018 "Z
disc" evidence=IDA] InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0043161 EMBL:AE014134 Gene3D:1.25.40.10 GO:GO:0046332
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0051879
GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0032436
GO:GO:0000209 GO:GO:0000151 GO:GO:0030544 KO:K09561 OMA:QENELHS
GO:GO:0030911 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 FlyBase:FBgn0027052 EMBL:AF129084
EMBL:AY069760 RefSeq:NP_477441.1 UniGene:Dm.392 SMR:Q9XYW6
IntAct:Q9XYW6 MINT:MINT-316282 STRING:Q9XYW6
EnsemblMetazoa:FBtr0080027 GeneID:34433 KEGG:dme:Dmel_CG5203
UCSC:CG5203-RA CTD:34433 InParanoid:Q9XYW6 GenomeRNAi:34433
NextBio:788473 Uniprot:Q9XYW6
Length = 289
Score = 121 (47.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
++PD I + ++ DPVI PS IT +R I+ HL DP R LT D LIPN
Sbjct: 212 EVPDFLCGKISFEILTDPVITPSG-ITYERKDIEEHLQRVGHFDPVTRVKLTQDQLIPNF 270
Query: 941 ELKAKIEEFI 950
+K ++ FI
Sbjct: 271 SMKEVVDSFI 280
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 491 LNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNL---------EITRIEKE 541
L GL++ +F ++ + RA D K G + QL L E RI++E
Sbjct: 88 LGQGLME-IDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLRLARKKRWNVMEEKRIQQE 146
Query: 542 IELSS 546
IEL S
Sbjct: 147 IELQS 151
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 882 DIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDAT-DPFNRSHLTADMLIPNT 940
++P+ I LMK+PVI+PS IT DR I +HL DP R LT + +IPN
Sbjct: 184 EVPEMLCGKITLELMKEPVIVPSG-ITYDREEIVQHLRRIGHFDPVTRKPLTENEIIPNY 242
Query: 941 ELKAKIEEFIKSQGLKRHGEG 961
LK IE+F+ ++ G
Sbjct: 243 ALKEVIEKFLDDNPWAKYEPG 263
>DICTYBASE|DDB_G0282185 [details] [associations]
symbol:DDB_G0282185 "U box domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
dictyBase:DDB_G0282185 EMBL:AAFI02000045 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 RefSeq:XP_640334.2
EnsemblProtists:DDB0252889 GeneID:8623435 KEGG:ddi:DDB_G0282185
Uniprot:Q54SX5
Length = 790
Score = 132 (51.5 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 883 IPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDA-TDPFNRSHLTADMLIPNTE 941
IP FLDPI +M DPV LPS I VDR IQ+H + TDP++ +T + N
Sbjct: 583 IPTTFLDPITLKMMSDPVTLPSGYI-VDRSTIQKHFRNQYFTDPYSGKPITPSDIQTNHL 641
Query: 942 LKAKIEEFIKSQGLKR 957
L AKI++F K G ++
Sbjct: 642 LCAKIKQF-KDHGKRK 656
Score = 50 (22.7 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 17/86 (19%), Positives = 37/86 (43%)
Query: 388 TKRDKIDPKYVFYSSRLDLRSLTALHASSEEVSEWINKGNPAKADGSKHFSDGENQLLQS 447
T RD I ++++ + ++++ + E+ + N G + + + + Q L
Sbjct: 400 TNRDLI--QFIYNDNLNNIKN--GFKLTPEQFGHYFNNGEQTSSLLLNQYLETQRQQLPH 455
Query: 448 QEATSSSGGASEPSLPAGRPASIGGG 473
+ SS +S S+ +G GGG
Sbjct: 456 TQHDHSSNSSSSMSINSGYSNGGGGG 481
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 171 FGNSTSSGSQCP 182
F NSTSS S P
Sbjct: 231 FSNSTSSSSSSP 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 981 946 0.00093 122 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 619 (66 KB)
Total size of DFA: 422 KB (2204 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 84.54u 0.17s 84.71t Elapsed: 00:00:03
Total cpu time: 84.56u 0.17s 84.73t Elapsed: 00:00:03
Start: Fri May 10 05:03:08 2013 End: Fri May 10 05:03:11 2013